Pregenerated sensors for GINM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000055211Ensembl transcript IDs: ENST00000367419.10, ENST00000433539.1, ENST00000650599.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACTGGGAAAAACACCTTTAAGATGGTTATTACCACAGCTGCTCCTGTAATTCCAATGGCGGCTCTGCTCTaGGAGGAGTTTCAGGTAACT | + |
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Preference number: 2 (lower is better) Translates to: TGKNTFKMVITTAAPVIPMAALL*EEFQVT Trigger: AGTTACCTGAAACTCCTCTCAGAGCAGAGCCGCCAT...TGGAATTACAGGAGCAGCTGTGGTAATAACCATCTTAAAGGTGTTTTTCCCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGAAAAACACCTTTAAGATGGTTATTACCACAGCTGCTCCTGTAATTCCATTCAAGTGGCAAATTTaGAGGCAACAGGCTACTTCG | + |
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Preference number: 2 (lower is better) Translates to: TGKNTFKMVITTAAPVIPFKWQI*RQQATS Trigger: CGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAA...TGGAATTACAGGAGCAGCTGTGGTAATAACCATCTTAAAGGTGTTTTTCCCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| 3UTR-3UTR GCA 90 bp | GCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTTTTAAATACATGTTTGAGTTTCAGGTAACTTaGCAGGTAAAACATCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: ATGYFGVHDMRWRFKYMFEFQVT*QVKHLH Trigger: ATGAAGATGTTTTACCTGGCAAGTTACCTGAAACTC...AAACATGTATTTAAAACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| 3UTR-3UTR CAA 90 bp | GCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTTTTAAATACATGTTTAATACTGGGAAAACGTaGCTCCAGAACCTACACAGA | + |
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Preference number: 3 (lower is better) Translates to: ATGYFGVHDMRWRFKYMFNTGKT*LQNLHR Trigger: TCTGTGTAGGTTCTGGAGCAACGTTTTCCCAGTATT...AAACATGTATTTAAAACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| 3UTR CCA 72 bp | TCCAACCACCATGATGTTCAAAAACTGAAAGAATACTaGGAAAACGTTGCTCCAGAACCTACACAGATCTTT | + |
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Preference number: 3 (lower is better) Translates to: SNHHDVQKLKEY*ENVAPEPTQIF Trigger: AAAGATCTGTGTAGGTTCTGGAGCAACGTTTTCCCAGTATTCTTTCAGTTTTTGAACATCATGGTGGTTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| 3UTR TCA 72 bp | ATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATaGGATGGCGTTTTAAATACATGTTTTATCTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: IWRQQATSESMI*DGVLNTCFIFK Trigger: CTTGAAGATAAAACATGTATTTAAAACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| CDS-3UTR CCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTGAGCGCCCTCCATCTTaGACAACCCGGGCAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRERPPS*TTRAEG Trigger: GCCCTCTGCCCGGGTTGTCCAAGATGGAGGGCGCTC...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CCA 90 bp | TTATATGAAGATGGCGGCTCTGCTCTGAGAGGAGTTTCAGGTAACTTGCCAGGTGGCGAGCGACCCCGGTaGAGCGCCCTCCATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYEDGGSALRGVSGNLPGGERPR*SALHLG Trigger: TCCAAGATGGAGGGCGCTCCACCGGGGTCGCTCGCC...ACCTGGCAAGTTACCTGAAACTCCTCTCAGAGCAGAGCCGCCATCTTCATATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| CDS-3UTR GCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTGTGATCTTGGCTCACTaGAGCCTCCGCCTCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRVILAH*SLRLPG Trigger: ACCCGGGAGGCGGAGGCTGCAGTGAGCCAAGATCAC...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATGGCGAGCGACCCCGGTaGAGCGCCCTCCATCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDGERPR*SALHLG Trigger: TCCAAGATGGAGGGCGCTCCACCGGGGTCGCTCGCC...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATTCTGATGCCGTCCTGTaGGGCTCCGGACAGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDSDAVL*GSGQRR Trigger: CCGCCGCTGTCCGGAGCCCCACAGGACGGCATCAGA...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATGAGCGCCCTCCATCTTaGACAACCCGGGCAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDERPPS*TTRAEG Trigger: GCCCTCTGCCCGGGTTGTCCAAGATGGAGGGCGCTC...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR GCA 90 bp | GCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTTTTAAATACATGTTTGTGATCTTGGCTCACTaGAGCCTCCGCCTCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: ATGYFGVHDMRWRFKYMFVILAH*SLRLPG Trigger: ACCCGGGAGGCGGAGGCTGCAGTGAGCCAAGATCAC...AAACATGTATTTAAAACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| CDS-3UTR TCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTACACATTACCTTATATaGAGATGGCGGCTCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRTHYLI*RWRLCS Trigger: AGAGCAGAGCCGCCATCTTCATATAAGGTAATGTGT...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR GCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTGGTTATTACCACAGCTaGTCCTGTAATTCCAACCAC | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRGYYHS*SCNSNH Trigger: GTGGTTGGAATTACAGGAGCAGCTGTGGTAATAACC...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTTTCAAGTGGCAAATTTaGAGGCAACAGGCTACTTCG | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRFKWQI*RQQATS Trigger: CGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAA...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR TCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTGTCATAGGCCACTCATaGACTAAAATCCTTACACTG | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRVIGHS*TKILTL Trigger: CAGTGTAAGGATTTTAGTTCATGAGTGGCCTATGAC...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR GCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTATACTGGGAAAACGTTaGTCCAGAACCTACACAGAT | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRILGKR*SRTYTD Trigger: ATCTGTGTAGGTTCTGGAGCAACGTTTTCCCAGTAT...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR TCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTCTACCTCTTCTTGAATaGCAATTAGTTGCAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRLPLLE*QLVANW Trigger: CCAGTTTGCAACTAATTGTCATTCAAGAAGAGGTAG...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR TCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTGTGACATCCTTTTGCTaGACTTGTTTTCCATCAATC | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRVTSFC*TCFPSI Trigger: GATTGATGGAAAACAAGTTCAGCAAAAGGATGTCAC...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR TCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGGCGGCTCTGCTCTaGGAGGAGTTTCAGGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDMAALL*EEFQVT Trigger: AGTTACCTGAAACTCCTCTCAGAGCAGAGCCGCCAT...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTTTCCTGATAAGATACTaGCTAGTGGTTTGCAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRFLIRY*LVVCSE Trigger: TTCACTGCAAACCACTAGCCAGTATCTTATCAGGAA...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR TCA 90 bp | TTATATGAAGATGGCGGCTCTGCTCTGAGAGGAGTTTCAGGTAACTTGCCAGGTCTACCTCTTCTTGAATaGCAATTAGTTGCAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: LYEDGGSALRGVSGNLPGLPLLE*QLVANW Trigger: CCAGTTTGCAACTAATTGTCATTCAAGAAGAGGTAG...ACCTGGCAAGTTACCTGAAACTCCTCTCAGAGCAGAGCCGCCATCTTCATATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| CDS-3UTR GCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTATGTTAAGAACAACCTaGTGTTTAGATATGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRMLRTT*CLDMSP Trigger: TGGGGACATATCTAAACAGCAGGTTGTTCTTAACAT...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR GCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTGAGTTTCAGGTAACTTaGCAGGTAAAACATCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWREFQVT*QVKHLH Trigger: ATGAAGATGTTTTACCTGGCAAGTTACCTGAAACTC...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTAAACTGAAAGAATACTaGGAAAACGTTGCTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRKLKEY*ENVAPE Trigger: TTCTGGAGCAACGTTTTCCCAGTATTCTTTCAGTTT...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CCA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTAAAACACCTTTAAGATaGTTATTACCACAGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VANLEATGYFGVHDMRWRKTPLR*LLPQLL Trigger: GAGCAGCTGTGGTAATAACCATCTTAAAGGTGTTTT...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR GCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATGGTTATTACCACAGCTaGTCCTGTAATTCCAACCAC | + |
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Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDGYYHS*SCNSNH Trigger: GTGGTTGGAATTACAGGAGCAGCTGTGGTAATAACC...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| 3UTR CAA 72 bp | TTTTCAGCTCTTTTCTCTGGACCATCTGGATATAAGTaGATAGCTGTCACAGGTATGACGTCCACTTTATCC | + |
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Preference number: 4 (lower is better) Translates to: FSALFSGPSGYK*IAVTGMTSTLS Trigger: GGATAAAGTGGACGTCATACCTGTGACAGCTATCAACTTATATCCAGATGGTCCAGAGAAAAGAGCTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| CDS-3UTR GCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATACTGGGAAAACGTTaGTCCAGAACCTACACAGAT | + |
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Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDILGKR*SRTYTD Trigger: ATCTGTGTAGGTTCTGGAGCAACGTTTTCCCAGTAT...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR TCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATGTGACATCCTTTTGCTaGACTTGTTTTCCATCAATC | + |
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Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDVTSFC*TCFPSI Trigger: GATTGATGGAAAACAAGTTCAGCAAAAGGATGTCAC...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR TCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATTCGGAGTCCATGATATaGGATGGCGTTTTAAATACA | + |
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Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDSESMI*DGVLNT Trigger: TGTATTTAAAACGCCATCTCATATCATGGACTCCGA...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR GCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATTACTGGCTAGTGGTTTaGAGTGAACTAACACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDYWLVV*SELTLS Trigger: AGAAAGTGTTAGTTCACTGCAAACCACTAGCCAGTA...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR GCA 90 bp | GCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTTTTAAATACATGTTTTACTGGCTAGTGGTTTaGAGTGAACTAACACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ATGYFGVHDMRWRFKYMFYWLVV*SELTLS Trigger: AGAAAGTGTTAGTTCACTGCAAACCACTAGCCAGTA...AAACATGTATTTAAAACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| CDS-3UTR CCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATTTCCTGATAAGATACTaGCTAGTGGTTTGCAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDFLIRY*LVVCSE Trigger: TTCACTGCAAACCACTAGCCAGTATCTTATCAGGAA...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR GCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGTTAAGAACAACCTaGTGTTTAGATATGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDMLRTT*CLDMSP Trigger: TGGGGACATATCTAAACAGCAGGTTGTTCTTAACAT...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATAAACTGAAAGAATACTaGGAAAACGTTGCTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDKLKEY*ENVAPE Trigger: TTCTGGAGCAACGTTTTCCCAGTATTCTTTCAGTTT...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CCA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATAAAACACCTTTAAGATaGTTATTACCACAGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: NYIQVANLEATGYFGVHDKTPLR*LLPQLL Trigger: GAGCAGCTGTGGTAATAACCATCTTAAAGGTGTTTT...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CAA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTGGAGCGCCCTCCATCTaGGACAACCCGGGCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: VANLEATGYFGVHDMRWRGAPSI*DNPGRG Trigger: CCCTCTGCCCGGGTTGTCCAAGATGGAGGGCGCTCC...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CAA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTTGCAGTGGCGTGATCTaGGCTCACTGCAGCCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: VANLEATGYFGVHDMRWRCSGVI*AHCSLR Trigger: GCGGAGGCTGCAGTGAGCCAAGATCACGCCACTGCA...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CAA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTCCATCTGGATATAAGTaGATAGCTGTCACAGGTATG | + |
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Preference number: 5 (lower is better) Translates to: VANLEATGYFGVHDMRWRPSGYK*IAVTGM Trigger: CATACCTGTGACAGCTATCAACTTATATCCAGATGG...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CAA 90 bp | GTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTATCCTTTTGCTGAACTaGTTTTCCATCAATCTCTAC | + |
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Preference number: 5 (lower is better) Translates to: VANLEATGYFGVHDMRWRILLLN*FSINLY Trigger: GTAGAGATTGATGGAAAACAAGTTCAGCAAAAGGAT...ACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CAA 90 bp | TTATATGAAGATGGCGGCTCTGCTCTGAGAGGAGTTTCAGGTAACTTGCCAGGTAACACTTTCTCTTTTTaGGAGAGGTTAGGAAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: LYEDGGSALRGVSGNLPGNTFSF*ERLGRV Trigger: TACCCTTCCTAACCTCTCCAAAAAAGAGAAAGTGTT...ACCTGGCAAGTTACCTGAAACTCCTCTCAGAGCAGAGCCGCCATCTTCATATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| CDS-3UTR CAA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATAATACTGGGAAAACGTaGCTCCAGAACCTACACAGA | + |
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Preference number: 5 (lower is better) Translates to: NYIQVANLEATGYFGVHDNTGKT*LQNLHR Trigger: TCTGTGTAGGTTCTGGAGCAACGTTTTCCCAGTATT...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CAA 90 bp | ACTGGGAAAAACACCTTTAAGATGGTTATTACCACAGCTGCTCCTGTAATTCCAAATACTGGGAAAACGTaGCTCCAGAACCTACACAGA | + |
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Preference number: 5 (lower is better) Translates to: TGKNTFKMVITTAAPVIPNTGKT*LQNLHR Trigger: TCTGTGTAGGTTCTGGAGCAACGTTTTCCCAGTATT...TGGAATTACAGGAGCAGCTGTGGTAATAACCATCTTAAAGGTGTTTTTCCCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| CDS-3UTR CAA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATGGAGTTTCAGGTAACTaGCCAGGTAAAACATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: NYIQVANLEATGYFGVHDGVSGN*PGKTSS Trigger: TGAAGATGTTTTACCTGGCAAGTTACCTGAAACTCC...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS-3UTR CAA 90 bp | ACTGGGAAAAACACCTTTAAGATGGTTATTACCACAGCTGCTCCTGTAATTCCAGGAGTTTCAGGTAACTaGCCAGGTAAAACATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: TGKNTFKMVITTAAPVIPGVSGN*PGKTSS Trigger: TGAAGATGTTTTACCTGGCAAGTTACCTGAAACTCC...TGGAATTACAGGAGCAGCTGTGGTAATAACCATCTTAAAGGTGTTTTTCCCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| CDS-3UTR CAA 90 bp | GCAACAGGCTACTTCGGAGTCCATGATATGAGATGGCGTTTTAAATACATGTTTCCATCTGGATATAAGTaGATAGCTGTCACAGGTATG | + |
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Preference number: 5 (lower is better) Translates to: ATGYFGVHDMRWRFKYMFPSGYK*IAVTGM Trigger: CATACCTGTGACAGCTATCAACTTATATCCAGATGG...AAACATGTATTTAAAACGCCATCTCATATCATGGACTCCGAAGTAGCCTGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| CDS-3UTR CAA 90 bp | AATTATATTCAAGTGGCAAATTTGGAGGCAACAGGCTACTTCGGAGTCCATGATATCCTTTTGCTGAACTaGTTTTCCATCAATCTCTAC | + |
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Preference number: 5 (lower is better) Translates to: NYIQVANLEATGYFGVHDILLLN*FSINLY Trigger: GTAGAGATTGATGGAAAACAAGTTCAGCAAAAGGAT...ATCATGGACTCCGAAGTAGCCTGTTGCCTCCAAATTTGCCACTTGAATATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS CCA 72 bp | CACGAACAGCAGGAGCCGGAGGGCGAGCGACCCCGGTaGAGCGCCCTCCATCTTGGACAACCCGGGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: HEQQEPEGERPR*SALHLGQPGQR Trigger: CCTCTGCCCGGGTTGTCCAAGATGGAGGGCGCTCCACCGGGGTCGCTCGCCCTCCGGCTCCTGCTGTTCGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000650599.1 |
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| CDS CAA 72 bp | GATGGCGGCTCTGCTCTGAGAGGAGTTTCAGGTAACTaGCCAGGTAAAACATCTTCATCTACAGTGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: DGGSALRGVSGN*PGKTSSSTVVS Trigger: GGAAACCACTGTAGATGAAGATGTTTTACCTGGCAAGTTACCTGAAACTCCTCTCAGAGCAGAGCCGCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367419.10 ENST00000433539.1 ENST00000650599.1 |
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| CDS CAA 90 bp | TTATATGAAGATGGCGGCTCTGCTCTGAGAGGAGTTTCAGGTAACTaGCCAGGTAAAACATCTTCATCTACAGTGGTTTCCACATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LYEDGGSALRGVSGN*PGKTSSSTVVSTFL Trigger: CAGGAATGTGGAAACCACTGTAGATGAAGATGTTTTACCTGGCAAGTTACCTGAAACTCCTCTCAGAGCAGAGCCGCCATCTTCATATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367419.10 ENST00000433539.1 ENST00000650599.1 |
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| CDS CCA 72 bp | TCATCTACAGTGGTTTCCACATTCCTGATAAGATACTaGCTAGTGGTTTGCAGTGAACTAACACTTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSTVVSTFLIRY*LVVCSELTLSL Trigger: AAGAGAAAGTGTTAGTTCACTGCAAACCACTAGCCAGTATCTTATCAGGAATGTGGAAACCACTGTAGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650599.1 |
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| CDS CCA 72 bp | TCATCTACAGTGGTTTCCACATTCCTGATAAGATACTaGCTAGTGGTTTGCAGTGAACTAACACTTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: SSTVVSTFLIRY*LVVCSELTLSF Trigger: AAAAGAAAGTGTTAGTTCACTGCAAACCACTAGCCAGTATCTTATCAGGAATGTGGAAACCACTGTAGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367419.10 ENST00000433539.1 |
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