RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GIGYF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000146830

Ensembl transcript IDs: ENST00000275732.5, ENST00000464111.1, ENST00000471340.2, ENST00000472105.1, ENST00000643385.1, ENST00000646601.1, ENST00000678049.1

Found 794 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCGCCCCTGCCTCTTCCTGTGCTCTCTGCGGGGAGCCTGCAGGCTaGGACCCTCGGTCCACGCCGCTGTGGCTGCCCTGGCCTACAGCC +
Preference number: 1 (lower is better)
Translates to: PAPASSCALCGEPAG*DPRSTPLWLPWPTA
Trigger: GGCTGTAGGCCAGGGCAGCCACAGCGGCGTGGACCGAGGGTCCCAGCCTGCAGGCTCCCCGCAGAGAGCACAGGAAGAGGCAGGGGCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR GCA 90 bp AATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTaGCCCACCCTGCCAGCCAGAGAGGTTGGCACGGCTTGGCCCCTC +
Preference number: 1 (lower is better)
Translates to: NGSSGRRPSPEPESC*PTLPAREVGTAWPL
Trigger: GAGGGGCCAAGCCGTGCCAACCTCTCTGGCTGGCAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR GCA 90 bp TACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTaGTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGCAGAGCTG +
Preference number: 1 (lower is better)
Translates to: YPTVKSASYQTRKAT*SSPIWSAEGSGAEL
Trigger: CAGCTCTGCACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGGGGAGCCTGCAGGCTaGGACCCTCGGTCCACGCCG +
Preference number: 2 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLGEPAG*DPRSTP
Trigger: CGGCGTGGACCGAGGGTCCCAGCCTGCAGGCTCCCC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR TCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCGCCGCTCACAGGGGTaGGGCAGCTCAGGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLRRSQG*GSSGRG
Trigger: ACCCCTGCCTGAGCTGCCTCACCCCTGTGAGCGGCG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCCACGCCGCTGTGGCTaGCCTGGCCTACAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLPRRCG*PGLQPR
Trigger: CCTGGGCTGTAGGCCAGGGCAGCCACAGCGGCGTGG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCCCTGCCTCTTCCTGTaGTCTCTGCGGGGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLPCLFL*SLRGAC
Trigger: GCAGGCTCCCCGCAGAGAGCACAGGAAGAGGCAGGG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGGGGAGCCTGCAGGCTaGGACCCTCGGTCCACGCCG +
Preference number: 2 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPGEPAG*DPRSTP
Trigger: CGGCGTGGACCGAGGGTCCCAGCCTGCAGGCTCCCC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGGGGAGCCTGCAGGCTaGGACCCTCGGTCCACGCCG +
Preference number: 2 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRGEPAG*DPRSTP
Trigger: CGGCGTGGACCGAGGGTCCCAGCCTGCAGGCTCCCC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGCCAGCCAGAGAGGTTaGCACGGCTTGGCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLASQRG*HGLAPP
Trigger: GGGAGGGGCCAAGCCGTGCCAACCTCTCTGGCTGGC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTGCTCACAACAGGTCTaGCGGGTGGGGCTCAGACAG +
Preference number: 2 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLCSQQV*RVGLRQ
Trigger: CTGTCTGAGCCCCACCCGCCAGACCTGTTGTGAGCA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR TCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCTCAGCCAGCCTCAGTaGCAGGAGCTGCTCACAACA +
Preference number: 2 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLLSQPQ*QELLTT
Trigger: TGTTGTGAGCAGCTCCTGTCACTGAGGCTGGCTGAG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCCATGGCCCGCCTTCTaGGGGGTAAGTATGGCCTTG +
Preference number: 2 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLPWPAF*GVSMAL
Trigger: CAAGGCCATACTTACCCCCCAGAAGGCGGGCCATGG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGAGGTTGGCACGGCTTaGCCCCTCCCGTCTACTCGG +
Preference number: 2 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPEVGTA*PLPSTR
Trigger: CCGAGTAGACGGGAGGGGCCAAGCCGTGCCAACCTC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR TCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGTGCCTCGTGGTGGGTaGGTTAAGGTGCATCGTGTG +
Preference number: 2 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLVPRGG*VKVHRV
Trigger: CACACGATGCACCTTAACTCACCCACCACGAGGCAC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTCTTCCTGTGCTCTCTaGGGGGAGCCTGCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSSCAL*GEPAGW
Trigger: CCAGCCTGCAGGCTCCCCGCAGAGAGCACAGGAAGA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCAGACAGGCCTCCTGTaGAAACTGCTGGCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGQTGLL*KLLAPS
Trigger: GCTGGGGGCCAGCAGTTTGCACAGGAGGCCTGTCTG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTAACAGGTCTGGCGGGTaGGGCTCAGACAGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGNRSGG*GSDRPP
Trigger: AGGAGGCCTGTCTGAGCCCCACCCGCCAGACCTGTT...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGAACAGGTCTGGCGGGTaGGGCTCAGACAGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRNRSGG*GSDRPP
Trigger: AGGAGGCCTGTCTGAGCCCCACCCGCCAGACCTGTT...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGGTGTCCCCCAAAATaGCAGCAGTGGGAGACGCCC +
Preference number: 2 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGCPPK*QQWETP
Trigger: GGGCGTCTCCCACTGCTGCCATTTTGGGGGACACCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGTTTGTAACAAGTGCTaGGGACCCCGCCCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGVCNKC*GPRPCL
Trigger: GAGGCAGGGGCGGGGTCCCCAGCACTTGTTACAAAC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGTTTGTAACAAGTGCTaGGGACCCCGCCCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRVCNKC*GPRPCL
Trigger: GAGGCAGGGGCGGGGTCCCCAGCACTTGTTACAAAC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCCATGGCCCGCCTTCTaGGGGGTAAGTATGGCCTTG +
Preference number: 2 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGPWPAF*GVSMAL
Trigger: CAAGGCCATACTTACCCCCCAGAAGGCGGGCCATGG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGTCCTGCCCCCTTCACTaGAGAAACAGCTCAGCCTTC +
Preference number: 2 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLSCPLH*RNSSAF
Trigger: GAAGGCTGAGCTGTTTCTCCAGTGAAGGGGGCAGGA...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGAGCTGGCTACAGGTTaGGGCCCCGGGCGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: QPYPTVKSASYQTRKATCELATG*GPGRQP
Trigger: GGGCTGCCGCCCGGGGCCCCAACCTGTAGCCAGCTC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCCACATCTTACGAGCTaGCTACAGGTTGGGGCCCCG +
Preference number: 2 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRPHLTS*LQVGAP
Trigger: CGGGGCCCCAACCTGTAGCCAGCTCGTAAGATGTGG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCCCCAGTCTGTAAAGTaGCTCGTGGTGGGTGAGTTA +
Preference number: 2 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLPQSVK*LVVGEL
Trigger: TAACTCACCCACCACGAGGCACTTTACAGACTGGGG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCTCAGTGACAGGAGCTaGTCACAACAGGTCTGGCGG +
Preference number: 2 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPLSDRS*SQQVWR
Trigger: CCGCCAGACCTGTTGTGAGCAGCTCCTGTCACTGAG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCTCAGTGACAGGAGCTaGTCACAACAGGTCTGGCGG +
Preference number: 2 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRLSDRS*SQQVWR
Trigger: CCGCCAGACCTGTTGTGAGCAGCTCCTGTCACTGAG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGCTCAGCCTTCTCTCTaGAGCCTCTGGAGCAATCAT +
Preference number: 2 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLAQPSL*SLWSNH
Trigger: ATGATTGCTCCAGAGGCTGCAGAGAGAAGGCTGAGC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTGGCAGCCAGAGAGCTaGGGCCACTCGTCCAATTTG +
Preference number: 2 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGWQPES*GHSSNL
Trigger: CAAATTGGACGAGTGGCCCCAGCTCTCTGGCTGCCA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTCTCTGCGGGGAGCCTaGAGGCTGGGACCCTCGGTC +
Preference number: 2 (lower is better)
Translates to: QPYPTVKSASYQTRKATCSLRGA*RLGPSV
Trigger: GACCGAGGGTCCCAGCCTGCAGGCTCCCCGCAGAGA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGCCAGCCAGAGAGGTTaGCACGGCTTGGCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: QPYPTVKSASYQTRKATCASQRG*HGLAPP
Trigger: GGGAGGGGCCAAGCCGTGCCAACCTCTCTGGCTGGC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGCAAGGCAGAGAGCTaGGGCTTTCAGGTTCAAACC +
Preference number: 2 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGKAES*GFQVQT
Trigger: GGTTTGAACCTGAAAGCCCCAGCTCTCTGCCTTGCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACCACGCCGCTGTGGCTaGCCTGGCCTACAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIPRRCG*PGLQPR
Trigger: CCTGGGCTGTAGGCCAGGGCAGCCACAGCGGCGTGG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCCCTGCCTCTTCCTGTaGTCTCTGCGGGGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: QPYPTVKSASYQTRKATCPCLFL*SLRGAC
Trigger: GCAGGCTCCCCGCAGAGAGCACAGGAAGAGGCAGGG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGGCCTGTGTCCCCACTaGCCCAAAATAACAGTGTGT +
Preference number: 2 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPGLCPH*PKITVC
Trigger: ACACACTGTTATTTTGGGGCAGTGGGGACACAGGCC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCAGACAGGCCTCCTGTaGAAACTGCTGGCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: QPYPTVKSASYQTRKATCQTGLL*KLLAPS
Trigger: GCTGGGGGCCAGCAGTTTGCACAGGAGGCCTGTCTG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGAACCAGAGTCCTGCTaGCCCACCCTGCCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: QPYPTVKSASYQTRKATCEPESC*PTLPAR
Trigger: TCTGGCTGGCAGGGTGGGGCAGCAGGACTCTGGTTC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTCTCTGCGGGGAGCCTaGAGGCTGGGACCCTCGGTC +
Preference number: 2 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQSLRGA*RLGPSV
Trigger: GACCGAGGGTCCCAGCCTGCAGGCTCCCCGCAGAGA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCCATGGCCCGCCTTCTaGGGGGTAAGTATGGCCTTG +
Preference number: 2 (lower is better)
Translates to: QPYPTVKSASYQTRKATCPWPAF*GVSMAL
Trigger: CAAGGCCATACTTACCCCCCAGAAGGCGGGCCATGG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTGCTCACAACAGGTCTaGCGGGTGGGGCTCAGACAG +
Preference number: 2 (lower is better)
Translates to: QPYPTVKSASYQTRKATCCSQQV*RVGLRQ
Trigger: CTGTCTGAGCCCCACCCGCCAGACCTGTTGTGAGCA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCCACATCTTACGAGCTaGCTACAGGTTGGGGCCCCG +
Preference number: 2 (lower is better)
Translates to: QPYPTVKSASYQTRKATCPHLTS*LQVGAP
Trigger: CGGGGCCCCAACCTGTAGCCAGCTCGTAAGATGTGG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCCCTGCCTCTTCCTGTaGTCTCTGCGGGGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQPCLFL*SLRGAC
Trigger: GCAGGCTCCCCGCAGAGAGCACAGGAAGAGGCAGGG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCTCAGTGACAGGAGCTaGTCACAACAGGTCTGGCGG +
Preference number: 2 (lower is better)
Translates to: QPYPTVKSASYQTRKATCLSDRS*SQQVWR
Trigger: CCGCCAGACCTGTTGTGAGCAGCTCCTGTCACTGAG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGAACCAGAGTCCTGCTaGCCCACCCTGCCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIEPESC*PTLPAR
Trigger: TCTGGCTGGCAGGGTGGGGCAGCAGGACTCTGGTTC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTGGCAGCCAGAGAGCTaGGGCCACTCGTCCAATTTG +
Preference number: 2 (lower is better)
Translates to: QPYPTVKSASYQTRKATCWQPES*GHSSNL
Trigger: CAAATTGGACGAGTGGCCCCAGCTCTCTGGCTGCCA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGAGGTTGGCACGGCTTaGCCCCTCCCGTCTACTCGG +
Preference number: 2 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQEVGTA*PLPSTR
Trigger: CCGAGTAGACGGGAGGGGCCAAGCCGTGCCAACCTC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAACAGGTCTGGCGGGTaGGGCTCAGACAGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQNRSGG*GSDRPP
Trigger: AGGAGGCCTGTCTGAGCCCCACCCGCCAGACCTGTT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR TCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACTCAGCCAGCCTCAGTaGCAGGAGCTGCTCACAACA +
Preference number: 2 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIILSQPQ*QELLTT
Trigger: TGTTGTGAGCAGCTCCTGTCACTGAGGCTGGCTGAG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTGGCAGCCAGAGAGCTaGGGCCACTCGTCCAATTTG +
Preference number: 2 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQWQPES*GHSSNL
Trigger: CAAATTGGACGAGTGGCCCCAGCTCTCTGGCTGCCA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCCAAAATGGCAGCAGTaGGAGACGCCCCTCACCAGA +
Preference number: 2 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQPKWQQ*ETPLTR
Trigger: TCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTGG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACCCCAGTCTGTAAAGTaGCTCGTGGTGGGTGAGTTA +
Preference number: 2 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIPQSVK*LVVGEL
Trigger: TAACTCACCCACCACGAGGCACTTTACAGACTGGGG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTCCTGCCCCCTTCACTaGAGAAACAGCTCAGCCTTC +
Preference number: 2 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQSCPLH*RNSSAF
Trigger: GAAGGCTGAGCTGTTTCTCCAGTGAAGGGGGCAGGA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTGCTCCTCTCCCATTTaGTCAGCGGAAGGGTCAGGT +
Preference number: 2 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQCSSPI*SAEGSG
Trigger: ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCCCCAGTCTGTAAAGTaGCTCGTGGTGGGTGAGTTA +
Preference number: 2 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQPQSVK*LVVGEL
Trigger: TAACTCACCCACCACGAGGCACTTTACAGACTGGGG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGGCCTGTGTCCCCACTaGCCCAAAATAACAGTGTGT +
Preference number: 2 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQGLCPH*PKITVC
Trigger: ACACACTGTTATTTTGGGGCAGTGGGGACACAGGCC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGCTCAGCCTTCTCTCTaGAGCCTCTGGAGCAATCAT +
Preference number: 2 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQAQPSL*SLWSNH
Trigger: ATGATTGCTCCAGAGGCTGCAGAGAGAAGGCTGAGC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR CCA 72 bp GCCTCTTCCTGTGCTCTCTGCGGGGAGCCTGCAGGCTaGGACCCTCGGTCCACGCCGCTGTGGCTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: ASSCALCGEPAG*DPRSTPLWLPW
Trigger: CCAGGGCAGCCACAGCGGCGTGGACCGAGGGTCCCAGCCTGCAGGCTCCCCGCAGAGAGCACAGGAAGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR CCA 72 bp TGCCCCACCCTGCCAGCCAGAGAGGTTGGCACGGCTTaGCCCCTCCCGTCTACTCGGCCAGCACAAGATGGC +
Preference number: 3 (lower is better)
Translates to: CPTLPAREVGTA*PLPSTRPAQDG
Trigger: GCCATCTTGTGCTGGCCGAGTAGACGGGAGGGGCCAAGCCGTGCCAACCTCTCTGGCTGGCAGGGTGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CAA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGAGAGGTTGGCACGGCTaGGCCCCTCCCGTCTACTCG +
Preference number: 3 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLRGWHG*APPVYS
Trigger: CGAGTAGACGGGAGGGGCCAAGCCGTGCCAACCTCT...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR GCA 72 bp AGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTaGCCCACCCTGCCAGCCAGAGAGGTTGGCACGGCT +
Preference number: 3 (lower is better)
Translates to: SGRRPSPEPESC*PTLPAREVGTA
Trigger: AGCCGTGCCAACCTCTCTGGCTGGCAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR CCA 72 bp GGCTTGGCCCCTCCCGTCTACTCGGCCAGCACAAGATaGCAGCCAGAGAGCTGGGGCCACTCGTCCAATTTG +
Preference number: 3 (lower is better)
Translates to: GLAPPVYSASTR*QPESWGHSSNL
Trigger: CAAATTGGACGAGTGGCCCCAGCTCTCTGGCTGCCATCTTGTGCTGGCCGAGTAGACGGGAGGGGCCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CAA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGGCCACTCGTCCAATTaGTGCAACTGTCCCCCAAAG +
Preference number: 3 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRGHSSN*CNCPPK
Trigger: CTTTGGGGGACAGTTGCACAAATTGGACGAGTGGCC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CAA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTCTGTGGACCTTCCATaGTCACACCCACTATCCTCA +
Preference number: 3 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSVDLP*SHPLSS
Trigger: TGAGGATAGTGGGTGTGACAATGGAAGGTCCACAGA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAGAGGTTGGCACGGCTaGGCCCCTCCCGTCTACTCG +
Preference number: 3 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQRGWHG*APPVYS
Trigger: CGAGTAGACGGGAGGGGCCAAGCCGTGCCAACCTCT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR GCA 72 bp GTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTaGTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGT +
Preference number: 3 (lower is better)
Translates to: VKSASYQTRKAT*SSPIWSAEGSG
Trigger: ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR CCA 72 bp GCCCAAAGAATACATTCACGTGGCAAGGCAGAGAGCTaGGGCTTTCAGGTTCAAACCCAGGGTGTCCCCCAA +
Preference number: 3 (lower is better)
Translates to: AQRIHSRGKAES*GFQVQTQGVPQ
Trigger: TTGGGGGACACCCTGGGTTTGAACCTGAAAGCCCCAGCTCTCTGCCTTGCCACGTGAATGTATTCTTTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CAA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAAAAGCCACCCACTCCTaGCCTTTGAGGCCCCTCCTC +
Preference number: 3 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIKATHS*PLRPLL
Trigger: GAGGAGGGGCCTCAAAGGCAAGGAGTGGGTGGCTTT...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR TCA 72 bp CCCCCTCCCCCAGTCTGTAAAGTGCCTCGTGGTGGGTaGGTTAAGGTGCATCGTGTGTTTGTAACAAGTGCT +
Preference number: 3 (lower is better)
Translates to: PPPPVCKVPRGG*VKVHRVFVTSA
Trigger: AGCACTTGTTACAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGGGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAAAGCCACCCACTCCTaGCCTTTGAGGCCCCTCCTC +
Preference number: 3 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQKATHS*PLRPLL
Trigger: GAGGAGGGGCCTCAAAGGCAAGGAGTGGGTGGCTTT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CAA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTCTGTGGACCTTCCATaGTCACACCCACTATCCTCA +
Preference number: 3 (lower is better)
Translates to: QPYPTVKSASYQTRKATCSVDLP*SHPLSS
Trigger: TGAGGATAGTGGGTGTGACAATGGAAGGTCCACAGA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGGCCACTCGTCCAATTaGTGCAACTGTCCCCCAAAG +
Preference number: 3 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQGHSSN*CNCPPK
Trigger: CTTTGGGGGACAGTTGCACAAATTGGACGAGTGGCC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR-3UTR CAA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCTGTGGACCTTCCATaGTCACACCCACTATCCTCA +
Preference number: 3 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISVDLP*SHPLSS
Trigger: TGAGGATAGTGGGTGTGACAATGGAAGGTCCACAGA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCAGGGCAATGGAGGCTaGTGGGGGCGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLQGNGG*WGRGGS
Trigger: GCTGCCGCCGCGCCCCCATCAGCCTCCATTGCCCTG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGTCTCGCCGGGGCCCTaGTCCGAGCCTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLVSPGP*SEPPAA
Trigger: GGCAGCTGGAGGCTCGGAGCAGGGCCCCGGCGAGAC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGACGCCACAGTCGGGCTaGGGCGGCCTCGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLTPQSG*GGLGEE
Trigger: CTCCTCCCCGAGGCCGCCGCAGCCCGACTGTGGCGT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646601.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCGGTGGTTGGGGGCCTaGGCCCGAGCTGGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLRWLGA*ARAGSR
Trigger: TCGGGAGCCAGCTCGGGCCCAGGCCCCCAACCACCG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGGGGAGCCTGCAGGCTaGGACCCTCGGTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLGEPAG*DPRSTP
Trigger: CGGCGTGGACCGAGGGTCCCAGCCTGCAGGCTCCCC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCAGGGCAATGGAGGCTaGTGGGGGCGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLQGNGG*WGRGGS
Trigger: GCTGCCGCCGCGCCCCCATCAGCCTCCATTGCCCTG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCGCCGCTCACAGGGGTaGGGCAGCTCAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLRRSQG*GSSGRG
Trigger: ACCCCTGCCTGAGCTGCCTCACCCCTGTGAGCGGCG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTCCGCGTGCTGCCCCTaGCTCGGGAGGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLSACCP*LGRCQP
Trigger: TGGCTGGCACCTCCCGAGGCAGGGGCAGCACGCGGA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCCACGCCGCTGTGGCTaGCCTGGCCTACAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLPRRCG*PGLQPR
Trigger: CCTGGGCTGTAGGCCAGGGCAGCCACAGCGGCGTGG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCTGTGGCGGCGGCGGTaGTGGCGGTGTCAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLLWRRR*WRCQVP
Trigger: GGGGACCTGACACCGCCACCACCGCCGCCGCCACAG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCGGTGGTTGGGGGCCTaGGCCCGAGCTGGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLRWLGA*ARAGSR
Trigger: TCGGGAGCCAGCTCGGGCCCAGGCCCCCAACCACCG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCGGCACCGCCGCAGGTaGGAGCTGCCTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGRHRRR*ELPPPP
Trigger: GGGAGGGGGAGGCAGCTCTCACCTGCGGCGGTGCCG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGGTGGGGGCTGTTTGTaGAGCTGCCGCTCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLGGGCL*SCRSPS
Trigger: GGAGGGCGAGCGGCAGCTGCACAAACAGCCCCCACC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCCCAGGCCCCCAAGCTaGACTCGGTGGTTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLPRPPS*TRWLGA
Trigger: GGCCCCCAACCACCGAGTGCAGCTTGGGGGCCTGGG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTCTCTGCGGGGAGCCTaGAGGCTGGGACCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLSLRGA*RLGPSV
Trigger: GACCGAGGGTCCCAGCCTGCAGGCTCCCCGCAGAGA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGACCACCATCAGGGCTaGCGGAGCGCCAGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLDHHQG*RSASGR
Trigger: GCGACCGCTGGCGCTCCGCCAGCCCTGATGGTGGTC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGTGGCGGCTGCAGAGTaGCGCAGGCCCTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLVAAAE*RRPWVC
Trigger: GCAGACCCAGGGCCTGCGCCACTCTGCAGCCGCCAC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGCGCACTGTGGGAGCTaGCGGCTGCTGACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLAHCGS*RLLTSW
Trigger: CCAGCTGGTCAGCAGCCGCCAGCTCCCACAGTGCGC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGCTGCACTCGGTGGTTaGGGGCCTGGGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLAALGG*GPGPEL
Trigger: CAGCTCGGGCCCAGGCCCCCAACCACCGAGTGCAGC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGCCCCCACTCTTGTCTaGCCCGCCCCACAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLAPTLV*PAPQWP
Trigger: GGGCCACTGTGGGGCGGGCCAGACAAGAGTGGGGGC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCTACAGCCCAGGGGCTaGGGGTCCGGGCTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLLQPRG*GSGLVS
Trigger: ACTGACCAGCCCGGACCCCCAGCCCCTGGGCTGTAG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGCCAGCCAGAGAGGTTaGCACGGCTTGGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLASQRG*HGLAPP
Trigger: GGGAGGGGCCAAGCCGTGCCAACCTCTCTGGCTGGC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCGCGGCCCCACATCTTaGTCACCTCGCCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLRGPTS*SPRPAA
Trigger: AGCCGCTGGGCGAGGTGATCAAGATGTGGGGCCGCG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCCTCCCGCTTCGCCCTaGGCTCCACTTCTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLPPASP*APLLCA
Trigger: AGCGCAGAGAAGTGGAGCTCAGGGCGAAGCGGGAGG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTGCAGTGGCTCGTCCTaGAGCACCGCGGCGAACTCC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLCSGSS*STAANS
Trigger: GGAGTTCGCCGCGGTGCTGCAGGACGAGCCACTGCA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCTCGGCTCCGCGTGCTaGCCCTGCCTCGGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPLGSAC*PCLGRC
Trigger: GCACCTCCCGAGGCAGGGGCAGCACGCGGAGCCGAG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGTCTCGCCGGGGCCCTaGTCCGAGCCTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPVSPGP*SEPPAA
Trigger: GGCAGCTGGAGGCTCGGAGCAGGGCCCCGGCGAGAC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGGCTGTTTGTGCAGCTaGCGCTCGCCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLGCLCS*RSPSSC
Trigger: GCAGCTGGAGGGCGAGCGGCAGCTGCACAAACAGCC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCTCAGCCATGCCTCCTaGTGCTGCTGCCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLLSHAS*CCCRCW
Trigger: CCAGCAGCGGCAGCAGCAGCAGGAGGCATGGCTGAG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGCCTGGAAGGCCGTCTaGAGCGAGGCGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLAWKAV*SEALLS
Trigger: GCTGAGCAGCGCCTCGCTGCAGACGGCCTTCCAGGC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCCCGCCTCTTGGCCTTaGTGCCCTCCCCGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPPASWP*CPPRGR
Trigger: TCGGCCCCGGGGAGGGCAGCAAGGCCAAGAGGCGGG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGGAGGGTTCAGGACATaGCTCTGCCGGCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLGGFRT*LCRQPC
Trigger: GCAGGGCTGCCGGCAGAGCCATGTCCTGAACCCTCC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCTGCCATCGTGGGGCTaGGCGTGTTTGAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLLPSWG*ACLRGR
Trigger: CCGGCCTCTCAAACACGCCCAGCCCCACGATGGCAG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGTTTGTCCCCCAGAGTaGGCCCAGGGTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLVCPPE*AQGGQW
Trigger: CCACTGCCCACCCTGGGCCCACTCTGGGGGACAAAC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCTCCAGATCTCCGGGTaGGCCAGCAGAGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLLQISG*ASRGAH
Trigger: GTGGGCTCCTCTGCTGGCCCACCCGGAGATCTGGAG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCTGTGGCGGCGGCGGTaGTGGCGGTGTCAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGLWRRR*WRCQVP
Trigger: GGGGACCTGACACCGCCACCACCGCCGCCGCCACAG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGAGGCGGCCCGAATCTaGCACCGACAAGGACCGGCT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLEAARI*HRQGPA
Trigger: AGCCGGTCCTTGTCGGTGCCAGATTCGGGCCGCCTC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCCAAGCTGCACTCGGTaGTTGGGGGCCTGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLPSCTR*LGAWAR
Trigger: TCGGGCCCAGGCCCCCAACCACCGAGTGCAGCTTGG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTGGGTGAAGCCGTCCTaGGGCCTGGGAATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLWVKPS*GLGMPC
Trigger: GCAGGGCATTCCCAGGCCCCAGGACGGCTTCACCCA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGGATCGCTACAGCCATaGGCACGTCCAGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLGSLQP*ARPGCP
Trigger: CGGGCAGCCTGGACGTGCCCATGGCTGTAGCGATCC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGTCAGTGCCCGCCTCTTaGCCTTGCTGCCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLSVPAS*PCCPPR
Trigger: CCGGGGAGGGCAGCAAGGCCAAGAGGCGGGCACTGA...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGGGAGCCTGCAGGCTaGGACCCTCGGTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGEPAG*DPRSTP
Trigger: CGGCGTGGACCGAGGGTCCCAGCCTGCAGGCTCCCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGAGCTGGCTACAGGTTaGGGCCCCGGGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGELATG*GPGRQP
Trigger: GGGCTGCCGCCCGGGGCCCCAACCTGTAGCCAGCTC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGAGCTGGCTACAGGTTaGGGCCCCGGGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPELATG*GPGRQP
Trigger: GGGCTGCCGCCCGGGGCCCCAACCTGTAGCCAGCTC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
3UTR CAA 72 bp CTGCCCCACCCTGCCAGCCAGAGAGGTTGGCACGGCTaGGCCCCTCCCGTCTACTCGGCCAGCACAAGATGG +
Preference number: 4 (lower is better)
Translates to: LPHPASQRGWHG*APPVYSASTRW
Trigger: CCATCTTGTGCTGGCCGAGTAGACGGGAGGGGCCAAGCCGTGCCAACCTCTCTGGCTGGCAGGGTGGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGGGCTGGTGCTGGAGTaGACGAGGGTACCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLGLVLE*TRVPKP
Trigger: TGGCTTGGGTACCCTCGTTCACTCCAGCACCAGCCC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGAGGGGCAGCCTCCTCTaGCCCAGGAGCCGCACACTT +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLRGSLL*PRSRTL
Trigger: AAGTGTGCGGCTCCTGGGTCAGAGGAGGCTGCCCCT...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGAGACAGGGAACACGGTaGCCCCTGCACCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLRQGTR*PLHPPQ
Trigger: TTGGGGTGGGTGCAGGGGTCACCGTGTTCCCTGTCT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCTCTGCCGGCAGCCCTaGCCTGCCCCGCATGACAGG +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPLCRQP*PAPHDR
Trigger: CCTGTCATGCGGGGCAGGGCAGGGCTGCCGGCAGAG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTCCGCGTGCTGCCCCTaGCTCGGGAGGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSACCP*LGRCQP
Trigger: TGGCTGGCACCTCCCGAGGCAGGGGCAGCACGCGGA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCTGTCTGAGCGGGCGTaGTCCTTCCTTGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLLSERA*SFLGPA
Trigger: GGCTGGCCCAAGGAAGGAGCACGCCCGCTCAGACAG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGAGGGCAGTGGCGGCTaGAGAGTGGCGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVREGSGG*RVAQAL
Trigger: CAGGGCCTGCGCCACTCTGCAGCCGCCACTGCCCTC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGAGGGCAGTGGCGGCTaGAGAGTGGCGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPEGSGG*RVAQAL
Trigger: CAGGGCCTGCGCCACTCTGCAGCCGCCACTGCCCTC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGAGCGCCTGGAGCTGCTaGAGGAATGCCGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLSAWSC*RNAVSC
Trigger: GCAGCTCACGGCATTCCTGCAGCAGCTCCAGGCGCT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCCCAGGCCCCCAAGCTaGACTCGGTGGTTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGPRPPS*TRWLGA
Trigger: GGCCCCCAACCACCGAGTGCAGCTTGGGGGCCTGGG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGCCCCAGGCCGCTGCTaGCGCCCCCACTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRAPGRC*RPHSCL
Trigger: CAGACAAGAGTGGGGGCGGCAGCAGCGGCCTGGGGC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCATGCCTCCTGCTGCTaGTGCCGCTGCTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLHASCC*CRCWLA
Trigger: AGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGCATG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCCACGCCGCTGTGGCTaGCCTGGCCTACAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPPRRCG*PGLQPR
Trigger: CCTGGGCTGTAGGCCAGGGCAGCCACAGCGGCGTGG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGCTGGCCCGGCTTGGTaGTGCAGCTCCCATCAACTC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLAGPAW*CSSHQL
Trigger: GAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGCCGGATGGTGTCTCTaGGCATCAGCACCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLAGWCL*ASAPSP
Trigger: TGGCGAGGGTGCTGATGCCCAGAGACACCATCCGGC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGACCACCATCAGGGCTaGCGGAGCGCCAGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPDHHQG*RSASGR
Trigger: GCGACCGCTGGCGCTCCGCCAGCCCTGATGGTGGTC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGACCACCATCAGGGCTaGCGGAGCGCCAGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRDHHQG*RSASGR
Trigger: GCGACCGCTGGCGCTCCGCCAGCCCTGATGGTGGTC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGTGGCGGCTGCAGAGTaGCGCAGGCCCTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRVAAAE*RRPWVC
Trigger: GCAGACCCAGGGCCTGCGCCACTCTGCAGCCGCCAC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGTCGTGAAGGGGCCTTaGATCTCGCCCTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLVVKGP*ISPCGS
Trigger: GGACCCACAGGGCGAGATCCAAGGCCCCTTCACGAC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGCCCCCACTCTTGTCTaGCCCGCCCCACAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRAPTLV*PAPQWP
Trigger: GGGCCACTGTGGGGCGGGCCAGACAAGAGTGGGGGC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGCTCCCGCCGCTCTTaGGGGTGTCCTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGSRRS*GCPPRA
Trigger: GGCTCTGGGAGGACACCCCCAAGAGCGGCGGGAGCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGGCTCCCGCCGCTCTTaGGGGTGTCCTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPGSRRS*GCPPRA
Trigger: GGCTCTGGGAGGACACCCCCAAGAGCGGCGGGAGCC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGGCTCCCGCCGCTCTTaGGGGTGTCCTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRGSRRS*GCPPRA
Trigger: GGCTCTGGGAGGACACCCCCAAGAGCGGCGGGAGCC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGTGGGTGAAGCCGTCCTaGGGCCTGGGAATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLWVKPS*GLGMPC
Trigger: GCAGGGCATTCCCAGGCCCCAGGACGGCTTCACCCA...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGGATCGCTACAGCCATaGGCACGTCCAGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLGSLQP*ARPGCP
Trigger: CGGGCAGCCTGGACGTGCCCATGGCTGTAGCGATCC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGCTGGGGGTCCGGGCTaGTCAGTAGTCATCCACGCT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLAGGPG*SVVIHA
Trigger: AGCGTGGATGACTACTGACCAGCCCGGACCCCCAGC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGAACAGGTCTGGCGGGTaGGGCTCAGACAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLNRSGG*GSDRPP
Trigger: AGGAGGCCTGTCTGAGCCCCACCCGCCAGACCTGTT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGAGGCTGGCCCGGCTTaGTGCTGCAGCTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLEAGPA*CCSSHQ
Trigger: TTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGCTGGGAGGGAGGCTaGCCCGGCTTGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGWEGG*PGLVLQ
Trigger: CTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCTGCGGTGTTGTCACTaGCTGGGAGGGAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLLRCCH*LGGRLA
Trigger: GGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCGCGGCCCCACATCTTaGTCACCTCGCCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRRGPTS*SPRPAA
Trigger: AGCCGCTGGGCGAGGTGATCAAGATGTGGGGCCGCG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCGCGGCCCCACATCTTaGTCACCTCGCCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPRGPTS*SPRPAA
Trigger: AGCCGCTGGGCGAGGTGATCAAGATGTGGGGCCGCG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGACCCCGAGGCCAGCTTaGTCCCCCAACACTGACCTA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLTPRPA*SPNTDL
Trigger: TAGGTCAGTGTTGGGGGATCAAGCTGGCCTCGGGGT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGATGAGTCCAGACGGTaGAAGACCTGGCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLDESRR*KTWQPG
Trigger: GCCAGGCTGCCAGGTCTTTCACCGTCTGGACTCATC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGAATGCCGTGAGCTGCTaGTGCTGCTGCTGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLNAVSC*CCCCGG
Trigger: GCCGCCACAGCAGCAGCAGCAGCAGCTCACGGCATT...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGAGCGCCTGGAGCTGCTaGAGGAATGCCGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLSAWSC*RNAVSC
Trigger: GCAGCTCACGGCATTCCTGCAGCAGCTCCAGGCGCT...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGGCACAGGGACCGCCTaGTGCTGCTGTAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLGTGTA*CCCSNF
Trigger: GAAGTTGCTACAGCAGCAGCAGGCGGTCCCTGTGCC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGGTGGGGGCTGTTTGTaGAGCTGCCGCTCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRGGGCL*SCRSPS
Trigger: GGAGGGCGAGCGGCAGCTGCACAAACAGCCCCCACC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGGCCTGGGAATGCCCTaGAGCAGCTTCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLGLGMP*SSFSSF
Trigger: GAAGCTGCTGAAGCTGCTGCAGGGCATTCCCAGGCC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTGGGCACGTCCAGGCTaGCCGTGGCGCTCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGWARPG*PWRSAC
Trigger: ACACGCTGAGCGCCACGGGCAGCCTGGACGTGCCCA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTGCTGCTGCTGCCGCTaGTGGCTGGCTTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLCCCCR*WLAFCL
Trigger: CAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGGCGCTGCTCAGCCATaGCTCCTGCTGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPGAAQP*LLLLLP
Trigger: CGGCAGCAGCAGCAGGAGGCATGGCTGAGCAGCGCC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGCGCTGCTCAGCCATaGCTCCTGCTGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGAAQP*LLLLLP
Trigger: CGGCAGCAGCAGCAGGAGGCATGGCTGAGCAGCGCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGTCTGCAGCGAGGCGCTaGTCAGCCATGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLSAARR*SAMPPA
Trigger: AGCAGGAGGCATGGCTGAGCAGCGCCTCGCTGCAGA...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGCCTGGAAGGCCGTCTaGAGCGAGGCGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPAWKAV*SEALLS
Trigger: GCTGAGCAGCGCCTCGCTGCAGACGGCCTTCCAGGC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGCCTCTTGGCCTTGCTaGCCTCCCCGGGGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRASWPC*PPRGRV
Trigger: AACTCGGCCCCGGGGAGGGCAGCAAGGCCAAGAGGC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGCCTCTTGGCCTTGCTaGCCTCCCCGGGGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGASWPC*PPRGRV
Trigger: AACTCGGCCCCGGGGAGGGCAGCAAGGCCAAGAGGC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGATGCTGGGGTCTGAGTaGAGCATCAGTGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLMLGSE*SISARL
Trigger: GAGGCGGGCACTGATGCTGCACTCAGACCCCAGCAT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTCTCTGCGGGGAGCCTaGAGGCTGGGACCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSLRGA*RLGPSV
Trigger: GACCGAGGGTCCCAGCCTGCAGGCTCCCCGCAGAGA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGTCTTCCTGTGCTCTCTaGGGGGAGCCTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLSSCAL*GEPAGW
Trigger: CCAGCCTGCAGGCTCCCCGCAGAGAGCACAGGAAGA...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCAGACAGGCCTCCTGTaGAAACTGCTGGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLQTGLL*KLLAPS
Trigger: GCTGGGGGCCAGCAGTTTGCACAGGAGGCCTGTCTG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGAACCAGAGTCCTGCTaGCCCACCCTGCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLEPESC*PTLPAR
Trigger: TCTGGCTGGCAGGGTGGGGCAGCAGGACTCTGGTTC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGAGCCAGGGGCTGCAGTaGCTCGTCCTGCAGCACCGC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRSQGLQ*LVLQHR
Trigger: GCGGTGCTGCAGGACGAGCCACTGCAGCCCCTGGCT...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCAGCTCTGGCTGCGCTaGATTTCCCGGGGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLQLWLR*ISRGLR
Trigger: ACGAAGCCCCCGGGAAATCCAGCGCAGCCAGAGCTG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCTCCTGAGGAGGCAGTaGGGTCAGCTCTTTCCCACC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLLLRRQ*GQLFPT
Trigger: GGTGGGAAAGAGCTGACCCCACTGCCTCCTCAGGAG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCCAAGCTGCACTCGGTaGTTGGGGGCCTGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPPSCTR*LGAWAR
Trigger: TCGGGCCCAGGCCCCCAACCACCGAGTGCAGCTTGG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGATCTGCTCGCACCACTaGGTGAAGCCGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLICSHH*VKPSWG
Trigger: GCCCCAGGACGGCTTCACCCAGTGGTGCGAGCAGAT...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCGTCCAGGCTGCCCGTaGCGCTCAGCGTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPRPGCP*RSACAA
Trigger: TGCTGCACACGCTGAGCGCCACGGGCAGCCTGGACG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCTCAGTGCCCGCCTCTTaGCCTTGCTGCCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPSVPAS*PCCPPR
Trigger: CCGGGGAGGGCAGCAAGGCCAAGAGGCGGGCACTGA...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGCCAGCCAGAGAGGTTaGCACGGCTTGGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRASQRG*HGLAPP
Trigger: GGGAGGGGCCAAGCCGTGCCAACCTCTCTGGCTGGC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGGGTGTCCCCCAAAATaGCAGCAGTGGGAGACGCCC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLGCPPK*QQWETP
Trigger: GGGCGTCTCCCACTGCTGCCATTTTGGGGGACACCC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGTGTTGTCACTGGCTaGGAGGGAGGCTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGVVTG*EGGWPG
Trigger: GCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGAGGACTCAAGCGGGTaGGCGGGGTCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVREDSSG*AGSRCC
Trigger: GCAGCACCTGGACCCCGCCCACCCGCTTGAGTCCTC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCTGCCCTGCCCCGCATaGCAGGAGAGGTCCATTCGC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPLPCPA*QERSIR
Trigger: GCGAATGGACCTCTCCTGTCATGCGGGGCAGGGCAG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGTCTGCATGGCAGCCGTaGACTGCTCCTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLSAWQP*TAPPPR
Trigger: CCTTGGAGGAGGAGCAGTTCACGGCTGCCATGCAGA...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCATCCCAGCTCTGGCTaGGCTGGATTTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPHPSSG*AGFPGG
Trigger: GCCCCCGGGAAATCCAGCGCAGCCAGAGCTGGGATG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCATCCCAGCTCTGGCTaGGCTGGATTTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRHPSSG*AGFPGG
Trigger: GCCCCCGGGAAATCCAGCGCAGCCAGAGCTGGGATG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCTGTCTGAGCGGGCGTaGTCCTTCCTTGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRLSERA*SFLGPA
Trigger: GGCTGGCCCAAGGAAGGAGCACGCCCGCTCAGACAG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCTGTCTGAGCGGGCGTaGTCCTTCCTTGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPLSERA*SFLGPA
Trigger: GGCTGGCCCAAGGAAGGAGCACGCCCGCTCAGACAG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCTCCGAGCCTCCAGCTaGCCTCCTCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPLRASS*PPPPPP
Trigger: AGGAGGAGGAGGAGGAGGGCAGCTGGAGGCTCGGAG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGAGCTGCTGCAGGAATaGCGTGAGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLELLQE*RELLLL
Trigger: CAGCAGCAGCAGCTCACGGCATTCCTGCAGCAGCTC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTTCAGCAATAGCTCCTaGTGCCGCACGTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLFSNSS*CRTCLR
Trigger: GCGCAAGCACGTGCGGCAGCAGGAGCTATTGCTGAA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGCTGTTTGTGCAGCTaGCGCTCGCCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGCLCS*RSPSSC
Trigger: GCAGCTGGAGGGCGAGCGGCAGCTGCACAAACAGCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCATGCCTCCTGCTGCTaGTGCCGCTGCTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRHASCC*CRCWLA
Trigger: AGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGCATG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGACCCGGAAGGCCACCTaGTCCTCTCCCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLTRKAT*SSPIWS
Trigger: TGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCTGGGCGGGGTCCAGGTaGTGCGGTGTTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPWAGSR*CGVVTG
Trigger: GCCAGTGACAACACCGCAGCACCTGGACCCCGCCCA...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGGTCCATTCGCCGGATaGTGTCTCTGGGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLGPFAG*CLWASA
Trigger: TGCTGATGCCCAGAGACACCATCCGGCGAATGGACC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCTGCCATCGTGGGGCTaGGCGTGTTTGAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRLPSWG*ACLRGR
Trigger: CCGGCCTCTCAAACACGCCCAGCCCCACGATGGCAG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGTCCAGGCACCACTCTaGGAGCCCATCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLVQAPL*EPILVL
Trigger: GAGGACAAGGATGGGCTCCCAGAGTGGTGCCTGGAC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCTCCTGAGGAGGCAGTaGGGTCAGCTCTTTCCCACC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLLLRRQ*GQLFPT
Trigger: GGTGGGAAAGAGCTGACCCCACTGCCTCCTCAGGAG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGTTTGTCCCCCAGAGTaGGCCCAGGGTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGVCPPE*AQGGQW
Trigger: CCACTGCCCACCCTGGGCCCACTCTGGGGGACAAAC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCTCCAGATCTCCGGGTaGGCCAGCAGAGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGLQISG*ASRGAH
Trigger: GTGGGCTCCTCTGCTGGCCCACCCGGAGATCTGGAG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGAGGCGGCCCGAATCTaGCACCGACAAGGACCGGCT +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPEAARI*HRQGPA
Trigger: AGCCGGTCCTTGTCGGTGCCAGATTCGGGCCGCCTC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCCGTCTTTTTGCGAATaGGCCGACCCGATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLPSFCE*ADPIGG
Trigger: GCCACCTATCGGGTCGGCCCATTCGCAAAAAGACGG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGGCTGGCTTTCTGCTTaGCCCTCCGCTCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLGWLSA*PSAPGI
Trigger: AATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGCTGCCGCTGCTGGCTaGCTTTCTGCTTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPAAAAG*LSAWPS
Trigger: GGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGCTGCCGCTGCTGGCTaGCTTTCTGCTTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGAAAAG*LSAWPS
Trigger: GGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGTTTGGTGCTGTGGTTaGCCTGGAAGGCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLVWCCG*PGRPSA
Trigger: TGCAGACGGCCTTCCAGGCCAACCACAGCACCAAAC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCCGAGTTTGGTGCTGTaGTTGGCCTGGAAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLPSLVL*LAWKAV
Trigger: GACGGCCTTCCAGGCCAACCACAGCACCAAACTCGG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCCCCGGGGCCGAGTTTaGTGCTGTGGTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPPRGRV*CCGWPG
Trigger: TCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
64% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGTTTGTAACAAGTGCTaGGGACCCCGCCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLVCNKC*GPRPCL
Trigger: GAGGCAGGGGCGGGGTCCCCAGCACTTGTTACAAAC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTGGCAGCCAGAGAGCTaGGGCCACTCGTCCAATTTG +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLWQPES*GHSSNL
Trigger: CAAATTGGACGAGTGGCCCCAGCTCTCTGGCTGCCA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCTGCGGTGTTGTCACTaGCTGGGAGGGAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGLRCCH*LGGRLA
Trigger: GGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCCCTCTCTGGGAGGCTaGGACAGGAGGTGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLPSLGG*DRRCSE
Trigger: TTCACTACACCTCCTGTCTCAGCCTCCCAGAGAGGG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR TCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGGGCTGGTGCTGGAGTaGACGAGGGTACCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRGLVLE*TRVPKP
Trigger: TGGCTTGGGTACCCTCGTTCACTCCAGCACCAGCCC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGTCCATCCCGCCTTGCTaGCTTCTCAAACCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLSIPPC*LLKPPL
Trigger: GAGAGGCGGTTTGAGAAGTCAGCAAGGCGGGATGGA...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCCAGTTCTCGCTGTCTaGGCGGGCGTGCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGPVLAV*AGVLLP
Trigger: AGGAAGGAGCACGCCCGCTCAGACAGCGAGAACTGG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCCAGTTCTCGCTGTCTaGGCGGGCGTGCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRPVLAV*AGVLLP
Trigger: AGGAAGGAGCACGCCCGCTCAGACAGCGAGAACTGG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCTGGACTTCTCCTCCTaGGGAGGCAGTGGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGLDFSS*GGSGVS
Trigger: GCTGACCCCACTGCCTCCTCAGGAGGAGAAGTCCAG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGCTGCAGGAATGCCGTaGGCTGCTGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPAAGMP*AAAAAA
Trigger: AGCAGCAGCAGCAGCAGCTCACGGCATTCCTGCAGC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCTCAGCCAGCCTCAGTaGCAGGAGCTGCTCACAACA +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLLSQPQ*QELLTT
Trigger: TGTTGTGAGCAGCTCCTGTCACTGAGGCTGGCTGAG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGAGGGCAGGGGCTGGTaGTGGAGTGAACGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGEGRGW*WSERGY
Trigger: GTACCCTCGTTCACTCCAGCACCAGCCCCTGCCCTC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGTGGGGGCTCTTTCTCTaGAGTTTCGTCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLWGLFL*SFVPIP
Trigger: GGGGATGGGGACGAAACTGCAGAGAAAGAGCCCCCA...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGCCTCCTGCTGCAGGTaGTTCAAGCCTTCATCATCC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLASCCR*FKPSSS
Trigger: GGATGATGAAGGCTTGAAGCACCTGCAGCAGGAGGC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCAGGTCCCCCAGAGCTaGCTTTTCTCGGAGCGCGCA +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRQVPQS*LFSERA
Trigger: TGCGCGCTCCGAGAAAAGGCAGCTCTGGGGGACCTG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCAATGCCGTGAGCTGCTaGTGCTGCTGCTGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPNAVSC*CCCCGG
Trigger: GCCGCCACAGCAGCAGCAGCAGCAGCTCACGGCATT...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGAATGCCGTGAGCTGCTaGTGCTGCTGCTGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRNAVSC*CCCCGG
Trigger: GCCGCCACAGCAGCAGCAGCAGCAGCTCACGGCATT...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCAGCGCCTGGAGCTGCTaGAGGAATGCCGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPSAWSC*RNAVSC
Trigger: GCAGCTCACGGCATTCCTGCAGCAGCTCCAGGCGCT...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGTCTCCTCTCGACGCTTaGGTTCCTCTTCCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLSPLDA*VPLPPA
Trigger: AGCGGGAGGAAGAGGAACGCAAGCGTCGAGAGGAGA...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCTTCATGGACAGCCCCTaGTTGGCCAGGCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPFMDSP*LARPAQ
Trigger: CTGGGCTGGCCTGGCCAAGCAGGGGCTGTCCATGAA...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCGCTCGCCCTCCAGCTaGAACTCCAGGAGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRRSPSS*NSRSVF
Trigger: GAAGACGCTCCTGGAGTTGCAGCTGGAGGGCGAGCG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCCTGGGGCCTGGGAATaGCCTGCAGCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRPGAWE*PAAASA
Trigger: TGCTGAAGCTGCTGCAGGGCATTCCCAGGCCCCAGG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGTGGCGCTCAGCGTGTaGAGCATCTGCTCGCACCAC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGVALSV*SICSHH
Trigger: GTGGTGCGAGCAGATGCTGCACACGCTGAGCGCCAC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTCACCAGAAGATCCGTaGAGGGAGTACCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLSPEDP*REYPRM
Trigger: CATCCTGGGGTACTCCCTGCACGGATCTTCTGGTGA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCTTCCTGTGCTCTCTaGGGGGAGCCTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRSSCAL*GEPAGW
Trigger: CCAGCCTGCAGGCTCCCCGCAGAGAGCACAGGAAGA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGAACCAGAGTCCTGCTaGCCCACCCTGCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVREPESC*PTLPAR
Trigger: TCTGGCTGGCAGGGTGGGGCAGCAGGACTCTGGTTC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGACCCGGAAGGCCACCTaGTCCTCTCCCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLTRKAT*SSPIWS
Trigger: TGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGT...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGCCCGGCTTGGTGCTaGAGCTCCCATCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGPAWC*SSHQLQ
Trigger: CTGGAGTTGATGGGAGCTGCAGCACCAAGCCGGGCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCCTCGCCACCCTCTCTaGGAGGCTGAGACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPPRHPL*EAETGG
Trigger: ACCTCCTGTCTCAGCCTCCCAGAGAGGGTGGCGAGG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGGCAGGGGCTGGTGCTaGAGTGAACGAGGGTACCCA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPGRGWC*SERGYP
Trigger: TGGGTACCCTCGTTCACTCCAGCACCAGCCCCTGCC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGCAGGGGCTGGTGCTaGAGTGAACGAGGGTACCCA +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGRGWC*SERGYP
Trigger: TGGGTACCCTCGTTCACTCCAGCACCAGCCCCTGCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTAAGGAGGGCAGGGGCTaGTGCTGGAGTGAACGAGGG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGKEGRG*CWSERG
Trigger: CCCTCGTTCACTCCAGCACCAGCCCCTGCCCTCCTT...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGAAGGAGGGCAGGGGCTaGTGCTGGAGTGAACGAGGG +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRKEGRG*CWSERG
Trigger: CCCTCGTTCACTCCAGCACCAGCCCCTGCCCTCCTT...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGATCATCTTCGGCCGCTaGGGGCTCTTTCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLIIFGR*GLFLCS
Trigger: ACTGCAGAGAAAGAGCCCCCAGCGGCCGAAGATGAT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGGGGGTTTGAGCGCCTaGAGCTGCTGCAGGAATGCC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRGGLSA*SCCRNA
Trigger: GGCATTCCTGCAGCAGCTCCAGGCGCTCAAACCCCC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCATCTGCTCGCACCACTaGGTGAAGCCGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPICSHH*VKPSWG
Trigger: GCCCCAGGACGGCTTCACCCAGTGGTGCGAGCAGAT...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGATCTGCTCGCACCACTaGGTGAAGCCGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRICSHH*VKPSWG
Trigger: GCCCCAGGACGGCTTCACCCAGTGGTGCGAGCAGAT...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTGCTGCTGCCGCTGCTaGCTGGCTTTCTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGCCCRC*LAFCLA
Trigger: GGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCTGCTGCTGCCGCTGCTaGCTGGCTTTCTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPCCCRC*LAFCLA
Trigger: GGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCA...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCAACAGGTCTGGCGGGTaGGGCTCAGACAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPNRSGG*GSDRPP
Trigger: AGGAGGCCTGTCTGAGCCCCACCCGCCAGACCTGTT...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCCAAAATGGCAGCAGTaGGAGACGCCCCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLPKWQQ*ETPLTR
Trigger: TCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTGG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGGGTGTCCCCCAAAATaGCAGCAGTGGGAGACGCCC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPGCPPK*QQWETP
Trigger: GGGCGTCTCCCACTGCTGCCATTTTGGGGGACACCC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTGCTCCTCTCCCATTTaGTCAGCGGAAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLCSSPI*SAEGSG
Trigger: ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGAGGCTGGCCCGGCTTaGTGCTGCAGCTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPEAGPA*CCSSHQ
Trigger: TTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCAGGGCAATGGAGGCTaGTGGGGGCGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCQGNGG*WGRGGS
Trigger: GCTGCCGCCGCGCCCCCATCAGCCTCCATTGCCCTG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGATGAGTCCAGACGGTaGAAGACCTGGGGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPDESRR*KTWGRR
Trigger: TCGCCTCCCCCAGGTCTTTCACCGTCTGGACTCATC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000275732.5
CDS-3UTR TCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGAGCCACGCTGTTCACTaGCAGGGAGAAGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLSHAVH*QGEVSL
Trigger: CAGAGAAACTTCTCCCTGTCAGTGAACAGCGTGGCT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTCTGCATGGCAGCCGTaGACTGCTCCTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSAWQP*TAPPPR
Trigger: CCTTGGAGGAGGAGCAGTTCACGGCTGCCATGCAGA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGCTGTATGAGTCACTaGGAGATGGGCTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGCMSH*EMGCSG
Trigger: GCCGGAGCAGCCCATCTCTCAGTGACTCATACAGCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGGCTGTATGAGTCACTaGGAGATGGGCTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPGCMSH*EMGCSG
Trigger: GCCGGAGCAGCCCATCTCTCAGTGACTCATACAGCC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGGAATAAGAAGTGGGTaGGCAATAGAAGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLGIRSG*AIEGAA
Trigger: GGCTGCCCCTTCTATTGCTCACCCACTTCTTATTCC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCCGAGGCCAGCTTaGTCCCCCAACACTGACCTA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPTPRPA*SPNTDL
Trigger: TAGGTCAGTGTTGGGGGATCAAGCTGGCCTCGGGGT...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTACCCCGAGGCCAGCTTaGTCCCCCAACACTGACCTA +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGTPRPA*SPNTDL
Trigger: TAGGTCAGTGTTGGGGGATCAAGCTGGCCTCGGGGT...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCACTGTCCAAACACCTaGGCCAGCCACGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGHCPNT*ASHVAT
Trigger: AGTGGCCACGTGGCTGGCTCAGGTGTTTGGACAGTG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGAAAGTTGAGTGTCTCTaGTGCCATCGTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLKVECL*CHRGAG
Trigger: CCCAGCCCCACGATGGCAGCAGAGACACTCAACTTT...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCAGCTCTTTCCCACCTaGCTCAGGCCCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGQLFPT*LRPFLL
Trigger: GAGGAGGAAGGGCCTGAGGCAGGTGGGAAAGAGCTG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGCCTCCTGCTGCAGGTaGTTCAAGCCTTCATCATCC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLASCCR*FKPSSS
Trigger: GGATGATGAAGGCTTGAAGCACCTGCAGCAGGAGGC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCCAAGGAGCTGTCCTaGAGGGAGGCCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRSKELS*REATSF
Trigger: GAAGCTGGTGGCCTCCCTGCAGGACAGCTCCTTGGA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTGAGCGCCTGGAGCTaGTGCAGGAATGCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRLSAWS*CRNAVS
Trigger: GCTCACGGCATTCCTGCAGCAGCTCCAGGCGCTCAA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCTTGAGCGCCTGGAGCTaGTGCAGGAATGCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPLSAWS*CRNAVS
Trigger: GCTCACGGCATTCCTGCAGCAGCTCCAGGCGCTCAA...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTTGAGCGCCTGGAGCTaGTGCAGGAATGCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGLSAWS*CRNAVS
Trigger: GCTCACGGCATTCCTGCAGCAGCTCCAGGCGCTCAA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGGCACAGGGACCGCCTaGTGCTGCTGTAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRGTGTA*CCCSNF
Trigger: GAAGTTGCTACAGCAGCAGCAGGCGGTCCCTGTGCC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCATGCTGGGGTCTGAGTaGAGCATCAGTGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPMLGSE*SISARL
Trigger: GAGGCGGGCACTGATGCTGCACTCAGACCCCAGCAT...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGGGAGTACCCCAGGATaGTGGGGTCTGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPGSTPG*WGLSAA
Trigger: TGCTGCACTCAGACCCCAGCATCCTGGGGTACTCCC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGGAGTACCCCAGGATaGTGGGGTCTGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGSTPG*WGLSAA
Trigger: TGCTGCACTCAGACCCCAGCATCCTGGGGTACTCCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCCCCAGTCTGTAAAGTaGCTCGTGGTGGGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLPQSVK*LVVGEL
Trigger: TAACTCACCCACCACGAGGCACTTTACAGACTGGGG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGGCTCAGCCTTCTCTCTaGAGCCTCTGGAGCAATCAT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLAQPSL*SLWSNH
Trigger: ATGATTGCTCCAGAGGCTGCAGAGAGAAGGCTGAGC...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCAAGCCACTGGGAATTaGTCTGACCTCAGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLQATGN*SDLSRA
Trigger: GGCTCTACTGAGGTCAGACCAATTCCCAGTGGCTTG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGGGGAGGCGAGGAGATaGGAAGCTCGAGTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRGEARR*EARVLS
Trigger: CGAAAGGACTCGAGCTTCCCATCTCCTCGCCTCCCC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000275732.5
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCAGCCAGCTTGTATTTaGGCATGGCAGGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGQPACI*AWQGTG
Trigger: CCCCGTCCCCTGCCATGCCCAAATACAAGCTGGCTG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCTGTCATCCCAGCTCTaGCTGCGCTGGATTTCCCGG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGLSSQL*LRWISR
Trigger: CCGGGAAATCCAGCGCAGCCAGAGCTGGGATGACAG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGACCCCGGGACTCAGCTaGATCCCCCGAATATCATCT +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLTPGLS*IPRISS
Trigger: AGATGATATTCGGGGGATCCAGCTGAGTCCCGGGGT...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTTCTTCAGCCGCTCCTaGTCCATGTTTCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLFFSRS*SMFPSS
Trigger: ACTGCTGGGAAACATGGACCAGGAGCGGCTGAAGAA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCTGTGGCGGCGGCGGTaGTGGCGGTGTCAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCLWRRR*WRCQVP
Trigger: GGGGACCTGACACCGCCACCACCGCCGCCGCCACAG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCCAGGAGCGTCTTCATaGACAGCCCCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPPGASS*TAPAWP
Trigger: TGGCCAAGCAGGGGCTGTCCATGAAGACGCTCCTGG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGAGTACCCCAGGATGCTaGGGTCTGAGTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLSTPGC*GLSAAS
Trigger: TGATGCTGCACTCAGACCCCAGCATCCTGGGGTACT...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCCATGGCCCGCCTTCTaGGGGGTAAGTATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRPWPAF*GVSMAL
Trigger: CAAGGCCATACTTACCCCCCAGAAGGCGGGCCATGG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGCTCACAACAGGTCTaGCGGGTGGGGCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRCSQQV*RVGLRQ
Trigger: CTGTCTGAGCCCCACCCGCCAGACCTGTTGTGAGCA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCCACATCTTACGAGCTaGCTACAGGTTGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGPHLTS*LQVGAP
Trigger: CGGGGCCCCAACCTGTAGCCAGCTCGTAAGATGTGG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGAGTCTCCCCCACACCTaGCAAGAGGGAAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRSLPHT*QEGRGA
Trigger: AGCTCCCCTTCCCTCTTGCCAGGTGTGGGGGAGACT...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCTAAAAGGACTCACCTaGGCCAGCCACGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGLKGLT*ASHVAT
Trigger: AGTGGCCACGTGGCTGGCTCAGGTGAGTCCTTTTAG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275732.5
CDS-3UTR TCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGGGGAACAGGGGCCATaGAGAACAGCACACGAAGGA +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRGEQGP*RTAHEG
Trigger: TCCTTCGTGTGCTGTTCTTCATGGCCCCTGTTCCCC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275732.5
CDS-3UTR TCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACGGCACCGCCGCAGGTaGGAGCTGCCTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIRHRRR*ELPPPP
Trigger: GGGAGGGGGAGGCAGCTCTCACCTGCGGCGGTGCCG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCCGCTTCACCAGCAGTaGCATGGAAAAGTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPPLHQQ*HGKVAG
Trigger: GCCGGCTACTTTTCCATGTCACTGCTGGTGAAGCGG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCCGCTTCACCAGCAGTaGCATGGAAAAGTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRPLHQQ*HGKVAG
Trigger: GCCGGCTACTTTTCCATGTCACTGCTGGTGAAGCGG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGCTCGCACCACTGGGTaGAGCCGTCCTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCARTTG*SRPGAW
Trigger: CCAGGCCCCAGGACGGCTTCACCCAGTGGTGCGAGC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGCTCGCACCACTGGGTaGAGCCGTCCTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLARTTG*SRPGAW
Trigger: CCAGGCCCCAGGACGGCTTCACCCAGTGGTGCGAGC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGGATTCCACCTCCTTaGGGATCGCTACAGCCATGG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGIPPP*GSLQPW
Trigger: CCATGGCTGTAGCGATCCTCAAGGAGGTGGAATCCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCTCAGCCAGCCTCAGTaGCAGGAGCTGCTCACAACA +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGLSQPQ*QELLTT
Trigger: TGTTGTGAGCAGCTCCTGTCACTGAGGCTGGCTGAG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCTCAGCCAGCCTCAGTaGCAGGAGCTGCTCACAACA +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRLSQPQ*QELLTT
Trigger: TGTTGTGAGCAGCTCCTGTCACTGAGGCTGGCTGAG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCGCCGCTCACAGGGGTaGGGCAGCTCAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCRRSQG*GSSGRG
Trigger: ACCCCTGCCTGAGCTGCCTCACCCCTGTGAGCGGCG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGCGAACTCCTTGTCCTaGAGCTCTTCCGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGANSLS*SSSGTL
Trigger: CAAGGTCCCGGAAGAGCTGCAGGACAAGGAGTTCGC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGCGAACTCCTTGTCCTaGAGCTCTTCCGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPANSLS*SSSGTL
Trigger: CAAGGTCCCGGAAGAGCTGCAGGACAAGGAGTTCGC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGCGAACTCCTTGTCCTaGAGCTCTTCCGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRANSLS*SSSGTL
Trigger: CAAGGTCCCGGAAGAGCTGCAGGACAAGGAGTTCGC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTGGAAGTCCAGCTCCTaGTCCTCAGGAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGWKSSS*SSGMGS
Trigger: GGAGCCCATTCCTGAGGAGCAGGAGCTGGACTTCCA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTGGGGGCTCTTTCTCTaGAGTTTCGTCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGWGLFL*SFVPIP
Trigger: GGGGATGGGGACGAAACTGCAGAGAAAGAGCCCCCA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCAGCTTCTCCGCCTCCTaGTGCAGGTGCTTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPSFSAS*CRCFKP
Trigger: AGGCTTGAAGCACCTGCAGCAGGAGGCGGAGAAGCT...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTAGCTTCTCCGCCTCCTaGTGCAGGTGCTTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSFSAS*CRCFKP
Trigger: AGGCTTGAAGCACCTGCAGCAGGAGGCGGAGAAGCT...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTTCAGCAATAGCTCCTaGTGCCGCACGTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGFSNSS*CRTCLR
Trigger: GCGCAAGCACGTGCGGCAGCAGGAGCTATTGCTGAA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTACAGGGACCGCCTGCTaGTGCTGTAGCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGTGTAC*CCSNFS
Trigger: GCTGAAGTTGCTACAGCAGCAGCAGGCGGTCCCTGT...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGCCCCAGGCCGCTGCTaGCGCCCCCACTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCAPGRC*RPHSCL
Trigger: CAGACAAGAGTGGGGGCGGCAGCAGCGGCCTGGGGC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGCCCCAGGCCGCTGCTaGCGCCCCCACTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLAPGRC*RPHSCL
Trigger: CAGACAAGAGTGGGGGCGGCAGCAGCGGCCTGGGGC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTAGCGTGTGCAGCATCTaGTCGCACCACTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSVCSI*SHHWVK
Trigger: CTTCACCCAGTGGTGCGAGCAGATGCTGCACACGCT...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCTCAGTGACAGGAGCTaGTCACAACAGGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGLSDRS*SQQVWR
Trigger: CCGCCAGACCTGTTGTGAGCAGCTCCTGTCACTGAG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTCTCAGGATACCAGCTaGGAAGCAGCCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSQDTS*EAASGT
Trigger: GGTGCCAGAGGCTGCTTCCCAGCTGGTATCCTGAGA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCCCCGGACTAGCTGGTaGGTCACCTGGGGTCTAAAA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPPRTSW*VTWGLK
Trigger: TTTTAGACCCCAGGTGACCCACCAGCTAGTCCGGGG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
61% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000275732.5
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCTCTCTGCTGCCATCGTaGGGCTGGGCGTGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPSLLPS*GWACLR
Trigger: TCTCAAACACGCCCAGCCCCACGATGGCAGCAGAGA...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCTCTGCTGCCATCGTaGGGCTGGGCGTGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRSLLPS*GWACLR
Trigger: TCTCAAACACGCCCAGCCCCACGATGGCAGCAGAGA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGCCCCCACTCTTGTCTaGCCCGCCCCACAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCAPTLV*PAPQWP
Trigger: GGGCCACTGTGGGGCGGGCCAGACAAGAGTGGGGGC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCCGTCTTTTTGCGAATaGGCCGACCCGATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRPSFCE*ADPIGG
Trigger: GCCACCTATCGGGTCGGCCCATTCGCAAAAAGACGG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGCAGCCAGAGAGCTaGGGCCACTCGTCCAATTTG +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRWQPES*GHSSNL
Trigger: CAAATTGGACGAGTGGCCCCAGCTCTCTGGCTGCCA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCCAGGCAGGCAAGCCTaGGCCAAGGCACCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLPGRQA*AKAPRA
Trigger: AGCCCGAGGTGCCTTGGCTCAGGCTTGCCTGCCTGG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR TCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACTCAGGCCCAAAGTTaGGTGTCTCTGCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPTQAQS*VSLLPS
Trigger: CGATGGCAGCAGAGACACTCAACTTTGGGCCTGAGT...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTACTCAGGCCCAAAGTTaGGTGTCTCTGCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGTQAQS*VSLLPS
Trigger: CGATGGCAGCAGAGACACTCAACTTTGGGCCTGAGT...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCGGCACCGCCGCAGGTaGGAGCTGCCTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQRHRRR*ELPPPP
Trigger: GGGAGGGGGAGGCAGCTCTCACCTGCGGCGGTGCCG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACTCGGCTCCGCGTGCTaGCCCTGCCTCGGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIILGSAC*PCLGRC
Trigger: GCACCTCCCGAGGCAGGGGCAGCACGCGGAGCCGAG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGTCTCGCCGGGGCCCTaGTCCGAGCCTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIVSPGP*SEPPAA
Trigger: GGCAGCTGGAGGCTCGGAGCAGGGCCCCGGCGAGAC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCTTCTCCGCCTCCTGCTaGAGGTGCTTCAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPFSASC*RCFKPS
Trigger: TGAAGGCTTGAAGCACCTGCAGCAGGAGGCGGAGAA...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGCCTGGAACCACTCTaGCATCTCCTGTGTCGTGAA +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGLEPL*HLLCRE
Trigger: TTCACGACACAGGAGATGGCAGAGTGGTTCCAGGCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCAGAAACTGCTGGTGCTaGAGCTGCTGGTACAAGGCC +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPRNCWC*SCWYKA
Trigger: GGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCT...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGGGACCGCCTGCTGCTaGTGTAGCAACTTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPGTACC*CSNFSN
Trigger: ATTGCTGAAGTTGCTACAGCAGCAGCAGGCGGTCCC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGGACCGCCTGCTGCTaGTGTAGCAACTTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGTACC*CSNFSN
Trigger: ATTGCTGAAGTTGCTACAGCAGCAGCAGGCGGTCCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGGCGCTGCTCAGCCATaGCTCCTGCTGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCGAAQP*LLLLLP
Trigger: CGGCAGCAGCAGCAGGAGGCATGGCTGAGCAGCGCC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGTCTCTGCGGGGAGCCTaGAGGCTGGGACCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLSLRGA*RLGPSV
Trigger: GACCGAGGGTCCCAGCCTGCAGGCTCCCCGCAGAGA...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCAGCCGAGGCCAGGATaGACGTTCAGGGCAAAGATA +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGQPRPG*TFRAKI
Trigger: TATCTTTGCCCTGAACGTCCATCCTGGCCTCGGCTG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGACCTCAGTAGAGCCTaGGAGGGACCTTCACATCTG +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGDLSRA*EGPSHL
Trigger: CAGATGTGAAGGTCCCTCCCAGGCTCTACTGAGGTC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGACCTCAGTAGAGCCTaGGAGGGACCTTCACATCTG +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPDLSRA*EGPSHL
Trigger: CAGATGTGAAGGTCCCTCCCAGGCTCTACTGAGGTC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCTGTCCAAACACCTGTaGGGGAACAGGGGCCATGAA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPLSKHL*GNRGHE
Trigger: TTCATGGCCCCTGTTCCCCCACAGGTGTTTGGACAG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000275732.5
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGGCGTGCTCCTTCCTTaGGCCAGCCCCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLGVLLP*ASPSLL
Trigger: GAGGAGGGAGGGGCTGGCCCAAGGAAGGAGCACGCC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGACCCCGGGACTCAGCTaGATCCCCCGAATATCATCT +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRTPGLS*IPRISS
Trigger: AGATGATATTCGGGGGATCCAGCTGAGTCCCGGGGT...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGTTGGATCTCGCCCTGTaGGTCCTTGTAGAACCACTT +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLLDLAL*VLVEPL
Trigger: AAGTGGTTCTACAAGGACCCACAGGGCGAGATCCAA...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGAGCTGGAGAAACTGCTaGTGCTGCAGCTGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRSWRNC*CCSCWY
Trigger: GTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCT...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGCGCACTGTGGGAGCTaGCGGCTGCTGACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCAHCGS*RLLTSW
Trigger: CCAGCTGGTCAGCAGCCGCCAGCTCCCACAGTGCGC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCCAAGCTGCACTCGGTaGTTGGGGGCCTGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLPSCTR*LGAWAR
Trigger: TCGGGCCCAGGCCCCCAACCACCGAGTGCAGCTTGG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGCCGACCCGATAGGTaGCTGTATGAGTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGRPDR*LYESLR
Trigger: TCTCAGTGACTCATACAGCCACCTATCGGGTCGGCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGTCAGTGCCCGCCTCTTaGCCTTGCTGCCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLSVPAS*PCCPPR
Trigger: CCGGGGAGGGCAGCAAGGCCAAGAGGCGGGCACTGA...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTAGTACCCCAGGATGCTaGGGTCTGAGTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSTPGC*GLSAAS
Trigger: TGATGCTGCACTCAGACCCCAGCATCCTGGGGTACT...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGCCAGCCAGAGAGGTTaGCACGGCTTGGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLASQRG*HGLAPP
Trigger: GGGAGGGGCCAAGCCGTGCCAACCTCTCTGGCTGGC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTCCTGCCCCCTTCACTaGAGAAACAGCTCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSCPLH*RNSSAF
Trigger: GAAGGCTGAGCTGTTTCTCCAGTGAAGGGGGCAGGA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGCTCCTCTCCCATTTaGTCAGCGGAAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRCSSPI*SAEGSG
Trigger: ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTGCTCCTCTCCCATTTaGTCAGCGGAAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGCSSPI*SAEGSG
Trigger: ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGGTGTTGTCACTGGCTaGGAGGGAGGCTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLGVVTG*EGGWPG
Trigger: GCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGAGGACTCAAGCGGGTaGGCGGGGTCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLEDSSG*AGSRCC
Trigger: GCAGCACCTGGACCCCGCCCACCCGCTTGAGTCCTC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGAGGAGGCGCATCCCTaGGGCCCCAGGCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCEEAHP*GPRQRT
Trigger: AGTCCTCTGCCTGGGGCCCCAGGGATGCGCCTCCTC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGAGCCACGCTGTTCACTaGCAGGGAGAAGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRSHAVH*QGEVSL
Trigger: CAGAGAAACTTCTCCCTGTCAGTGAACAGCGTGGCT...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACGCCGCTCACAGGGGTaGGGCAGCTCAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIRRSQG*GSSGRG
Trigger: ACCCCTGCCTGAGCTGCCTCACCCCTGTGAGCGGCG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGAGGGGCAGCCTCCTCTaGCCCAGGAGCCGCACACTT +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLRGSLL*PRSRTL
Trigger: AAGTGTGCGGCTCCTGGGTCAGAGGAGGCTGCCCCT...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGGAATAAGAAGTGGGTaGGCAATAGAAGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRGIRSG*AIEGAA
Trigger: GGCTGCCCCTTCTATTGCTCACCCACTTCTTATTCC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGATGGGAGGAGCTGGATaGGAAACCCAAAAGACAAAA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLMGGAG*ETQKTK
Trigger: TTTTGTCTTTTGGGTTTCTCATCCAGCTCCTCCCAT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACTCTGCCGGCAGCCCTaGCCTGCCCCGCATGACAGG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIILCRQP*PAPHDR
Trigger: CCTGTCATGCGGGGCAGGGCAGGGCTGCCGGCAGAG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTTCAGGACATGGCTCTaGCGGCAGCCCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCFRTWL*RQPCPA
Trigger: GGCAGGGCAGGGCTGCCGGCAGAGCCATGTCCTGAA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTGCAGTGGCTCGTCCTaGAGCACCGCGGCGAACTCC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCCSGSS*STAANS
Trigger: GGAGTTCGCCGCGGTGCTGCAGGACGAGCCACTGCA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCCGCGTGCTGCCCCTaGCTCGGGAGGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISACCP*LGRCQP
Trigger: TGGCTGGCACCTCCCGAGGCAGGGGCAGCACGCGGA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCATCGCCTTCTTCGATaGTTCTTTGGTAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLHRLLR*FFGKSS
Trigger: GCTGCTTTTACCAAAGAAGCATCGAAGAAGGCGATG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCATCCCAGCTCTGGCTaGGCTGGATTTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCHPSSG*AGFPGG
Trigger: GCCCCCGGGAAATCCAGCGCAGCCAGAGCTGGGATG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCTCCGAGCCTCCAGCTaGCCTCCTCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCLRASS*PPPPPP
Trigger: AGGAGGAGGAGGAGGAGGGCAGCTGGAGGCTCGGAG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGAATCAAATTCAAACTTaGGCCGCCGTTCCCCATGTT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLNQIQT*AAVPHV
Trigger: AACATGGGGAACGGCGGCGCAAGTTTGAATTTGATT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCGCTTCTGCTCCTCCTaGTGCTGCTGGCGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLRFCSS*CCWRRF
Trigger: GAAGCGCCGCCAGCAGCAGCAGGAGGAGCAGAAGCG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCTTCCTCCGTCTTTTTaGGAATGGGCCGACCCGATA +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRLPPSF*EWADPI
Trigger: TATCGGGTCGGCCCATTCGCAAAAAGACGGAGGAAG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCTCAGCCATGCCTCCTaGTGCTGCTGCCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLLSHAS*CCCRCW
Trigger: CCAGCAGCGGCAGCAGCAGCAGGAGGCATGGCTGAG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCCCGCCTCTTGGCCTTaGTGCCCTCCCCGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQPASWP*CPPRGR
Trigger: TCGGCCCCGGGGAGGGCAGCAAGGCCAAGAGGCGGG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGCTCAGCCTTCTCTCTaGAGCCTCTGGAGCAATCAT +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRAQPSL*SLWSNH
Trigger: ATGATTGCTCCAGAGGCTGCAGAGAGAAGGCTGAGC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGCGGGGTCCAGGTGCTaGGGTGTTGTCACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCAGSRC*GVVTGW
Trigger: CCAGCCAGTGACAACACCGCAGCACCTGGACCCCGC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGCGGGGTCCAGGTGCTaGGGTGTTGTCACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLAGSRC*GVVTGW
Trigger: CCAGCCAGTGACAACACCGCAGCACCTGGACCCCGC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCTCCTCTAAGGGAGGATaGAGGGGACTTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPSSKGG*RGLSGG
Trigger: TCCTCCTGAAAGTCCCCTCCATCCTCCCTTAGAGGA...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTCCTCTAAGGGAGGATaGAGGGGACTTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSSKGG*RGLSGG
Trigger: TCCTCCTGAAAGTCCCCTCCATCCTCCCTTAGAGGA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCTGGGAAGCAGCCTCTaGCACCATCAGGTGGAAATA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPLGSSL*HHQVEI
Trigger: TATTTCCACCTGATGGTGCCAGAGGCTGCTTCCCAG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGGAGGGTTCAGGACATaGCTCTGCCGGCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCGGFRT*LCRQPC
Trigger: GCAGGGCTGCCGGCAGAGCCATGTCCTGAACCCTCC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGAGGGACCTTCACATCTaGGAAAGACCCTTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLRDLHI*ERPLRR
Trigger: TCTCCTTAAGGGTCTTTCCCAGATGTGAAGGTCCCT...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCAAGCCACTGGGAATTaGTCTGACCTCAGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGQATGN*SDLSRA
Trigger: GGCTCTACTGAGGTCAGACCAATTCCCAGTGGCTTG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGGGCCCCGGACTAGCTaGTGGGTCACCTGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLGPRTS*WVTWGL
Trigger: TAGACCCCAGGTGACCCACCAGCTAGTCCGGGGCCC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000275732.5
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGTTTGTCCCCCAGAGTaGGCCCAGGGTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCVCPPE*AQGGQW
Trigger: CCACTGCCCACCCTGGGCCCACTCTGGGGGACAAAC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTCTTCAGCCGCTCCTaGTCCATGTTTCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRFFSRS*SMFPSS
Trigger: ACTGCTGGGAAACATGGACCAGGAGCGGCTGAAGAA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGCTGCACTCGGTGGTTaGGGGCCTGGGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIAALGG*GPGPEL
Trigger: CAGCTCGGGCCCAGGCCCCCAACCACCGAGTGCAGC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGGATCGCTACAGCCATaGGCACGTCCAGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCGSLQP*ARPGCP
Trigger: CGGGCAGCCTGGACGTGCCCATGGCTGTAGCGATCC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCCCCGGGGCCGAGTTTaGTGCTGTGGTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCPRGRV*CCGWPG
Trigger: TCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGAGGTTGGCACGGCTTaGCCCCTCCCGTCTACTCGG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLEVGTA*PLPSTR
Trigger: CCGAGTAGACGGGAGGGGCCAAGCCGTGCCAACCTC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGAGCTGGCTACAGGTTaGGGCCCCGGGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQELATG*GPGRQP
Trigger: GGGCTGCCGCCCGGGGCCCCAACCTGTAGCCAGCTC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTTACAAAACCCAAAATaGGCGGAGACGAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLLQNPK*AETNPS
Trigger: ACTTGGGTTCGTCTCCGCCCATTTTGGGTTTTGTAA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCAAAGTCTCTTTAGCTaGGGAGAAGAGACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLQSLFS*GEETGR
Trigger: TCTTCCTGTCTCTTCTCCCCAGCTAAAGAGACTTTG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCAGGGACCTTCACATCTaGGAAAGACCCAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPRDLHI*ERPSWE
Trigger: TTCCCAGCTGGGTCTTTCCCAGATGTGAAGGTCCCT...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646601.1
CDS-3UTR TCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACCAGGCAGGCAAGCCTaGGCCAAGGCACCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIPGRQA*AKAPRA
Trigger: AGCCCGAGGTGCCTTGGCTCAGGCTTGCCTGCCTGG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR TCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGGACCTTGTTCTCCTTaGCGTAGAGAGCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPGPCSP*RREPAF
Trigger: AAATGCTGGCTCTCTACGTCAAGGAGAACAAGGTCC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGGACCTTGTTCTCCTTaGCGTAGAGAGCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRGPCSP*RREPAF
Trigger: AAATGCTGGCTCTCTACGTCAAGGAGAACAAGGTCC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCTGGACTTCTCCTCCTaGGGAGGCAGTGGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLLDFSS*GGSGVS
Trigger: GCTGACCCCACTGCCTCCTCAGGAGGAGAAGTCCAG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCTGGACTTCTCCTCCTaGGGAGGCAGTGGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCLDFSS*GGSGVS
Trigger: GCTGACCCCACTGCCTCCTCAGGAGGAGAAGTCCAG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGCTGCAGGAATGCCGTaGGCTGCTGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLAAGMP*AAAAAA
Trigger: AGCAGCAGCAGCAGCAGCTCACGGCATTCCTGCAGC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCAGACAGGGAACACGGTaGCCCCTGCACCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCRQGTR*PLHPPQ
Trigger: TTGGGGTGGGTGCAGGGGTCACCGTGTTCCCTGTCT...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCATCGCCTTCTTCGATaGTTCTTTGGTAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLHRLLR*FFGKSS
Trigger: GCTGCTTTTACCAAAGAAGCATCGAAGAAGGCGATG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGAGGGCAGTGGCGGCTaGAGAGTGGCGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQEGSGG*RVAQAL
Trigger: CAGGGCCTGCGCCACTCTGCAGCCGCCACTGCCCTC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCAGGTCCCCCAGAGCTaGCTTTTCTCGGAGCGCGCA +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCQVPQS*LFSERA
Trigger: TGCGCGCTCCGAGAAAAGGCAGCTCTGGGGGACCTG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCAGGTCCCCCAGAGCTaGCTTTTCTCGGAGCGCGCA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLQVPQS*LFSERA
Trigger: TGCGCGCTCCGAGAAAAGGCAGCTCTGGGGGACCTG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTGCTCCTCCTGCTGCTaGTGGCGGCGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCCSSCC*WRRFSS
Trigger: AGAGGAGAAGCGCCGCCAGCAGCAGCAGGAGGAGCA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTTCATGGACAGCCCCTaGTTGGCCAGGCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCFMDSP*LARPAQ
Trigger: CTGGGCTGGCCTGGCCAAGCAGGGGCTGTCCATGAA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGGTGGGGGCTGTTTGTaGAGCTGCCGCTCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIGGGCL*SCRSPS
Trigger: GGAGGGCGAGCGGCAGCTGCACAAACAGCCCCCACC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCCTGGGGCCTGGGAATaGCCTGCAGCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCPGAWE*PAAASA
Trigger: TGCTGAAGCTGCTGCAGGGCATTCCCAGGCCCCAGG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATGGGCACGTCCAGGCTaGCCGTGGCGCTCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIWARPG*PWRSAC
Trigger: ACACGCTGAGCGCCACGGGCAGCCTGGACGTGCCCA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTGCTGGCTGGCTTTCTaGTTGGCCCTCCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCCWLAF*LALRSR
Trigger: CCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTCTGCAGCGAGGCGCTaGTCAGCCATGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCSAARR*SAMPPA
Trigger: AGCAGGAGGCATGGCTGAGCAGCGCCTCGCTGCAGA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCGGGGCCGAGTTTGGTaGTGTGGTTGGCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCRGRVW*CGWPGR
Trigger: CCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCGGGGCCGAGTTTGGTaGTGTGGTTGGCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLRGRVW*CGWPGR
Trigger: CCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGCTGGCCCGGCTTGGTaGTGCAGCTCCCATCAACTC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLAGPAW*CSSHQL
Trigger: GAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCCTCGCCACCCTCTCTaGGAGGCTGAGACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLPRHPL*EAETGG
Trigger: ACCTCCTGTCTCAGCCTCCCAGAGAGGGTGGCGAGG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGCCGGATGGTGTCTCTaGGCATCAGCACCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCAGWCL*ASAPSP
Trigger: TGGCGAGGGTGCTGATGCCCAGAGACACCATCCGGC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCAGCTCTGGCTGCGCTaGATTTCCCGGGGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLQLWLR*ISRGLR
Trigger: ACGAAGCCCCCGGGAAATCCAGCGCAGCCAGAGCTG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGGCGTGCTCCTTCCTTaGGCCAGCCCCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIGVLLP*ASPSLL
Trigger: GAGGAGGGAGGGGCTGGCCCAAGGAAGGAGCACGCC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGTCGTGAAGGGGCCTTaGATCTCGCCCTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCVVKGP*ISPCGS
Trigger: GGACCCACAGGGCGAGATCCAAGGCCCCTTCACGAC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGGGGGTTTGAGCGCCTaGAGCTGCTGCAGGAATGCC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLGGLSA*SCCRNA
Trigger: GGCATTCCTGCAGCAGCTCCAGGCGCTCAAACCCCC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGAGTCGAAGAGTTAATTaGTATGTCCCAAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLSRRVN*YVPKTG
Trigger: GCCAGTCTTTGGGACATACCAATTAACTCTTCGACT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGCTGCACTCGGTGGTTaGGGGCCTGGGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQAALGG*GPGPEL
Trigger: CAGCTCGGGCCCAGGCCCCCAACCACCGAGTGCAGC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTGCTGCTGCCGCTGCTaGCTGGCTTTCTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCCCCRC*LAFCLA
Trigger: GGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACTACAGCCCAGGGGCTaGGGGTCCGGGCTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIILQPRG*GSGLVS
Trigger: ACTGACCAGCCCGGACCCCCAGCCCCTGGGCTGTAG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGGGTGTCCCCCAAAATaGCAGCAGTGGGAGACGCCC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCGCPPK*QQWETP
Trigger: GGGCGTCTCCCACTGCTGCCATTTTGGGGGACACCC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGGCTGGGAGGGAGGCTaGCCCGGCTTGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQGWEGG*PGLVLQ
Trigger: CTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTCTGCATGGCAGCCGTaGACTGCTCCTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCSAWQP*TAPPPR
Trigger: CCTTGGAGGAGGAGCAGTTCACGGCTGCCATGCAGA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCCATCTCCTGTGTCGTaGAGGGGCCTTGGATCTCGC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLPSPVS*RGLGSR
Trigger: GCGAGATCCAAGGCCCCTTCACGACACAGGAGATGG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGGCTGTATGAGTCACTaGGAGATGGGCTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCGCMSH*EMGCSG
Trigger: GCCGGAGCAGCCCATCTCTCAGTGACTCATACAGCC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGATGAGTCCAGACGGTaGAAGACCTGGCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLDESRR*KTWQPG
Trigger: GCCAGGCTGCCAGGTCTTTCACCGTCTGGACTCATC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCACTGTCCAAACACCTaGGCCAGCCACGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCHCPNT*ASHVAT
Trigger: AGTGGCCACGTGGCTGGCTCAGGTGTTTGGACAGTG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCCAGAGCCAGGGGCTaGAGTGGCTCGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISRARG*SGSSCS
Trigger: GCTGCAGGACGAGCCACTGCAGCCCCTGGCTCTGGA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCAGCTCTTTCCCACCTaGCTCAGGCCCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLQLFPT*LRPFLL
Trigger: GAGGAGGAAGGGCCTGAGGCAGGTGGGAAAGAGCTG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACGCTTCTGCTCCTCCTaGTGCTGCTGGCGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIRFCSS*CCWRRF
Trigger: GAAGCGCCGCCAGCAGCAGCAGGAGGAGCAGAAGCG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGGCACAGGGACCGCCTaGTGCTGCTGTAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCGTGTA*CCCSNF
Trigger: GAAGTTGCTACAGCAGCAGCAGGCGGTCCCTGTGCC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGGCCTGGGAATGCCCTaGAGCAGCTTCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLGLGMP*SSFSSF
Trigger: GAAGCTGCTGAAGCTGCTGCAGGGCATTCCCAGGCC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTGGGCACGTCCAGGCTaGCCGTGGCGCTCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQWARPG*PWRSAC
Trigger: ACACGCTGAGCGCCACGGGCAGCCTGGACGTGCCCA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGTGCTGCTGCTGCCGCTaGTGGCTGGCTTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLCCCCR*WLAFCL
Trigger: CAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCA...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGCCTGGAAGGCCGTCTaGAGCGAGGCGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQAWKAV*SEALLS
Trigger: GCTGAGCAGCGCCTCGCTGCAGACGGCCTTCCAGGC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGGGAGTACCCCAGGATaGTGGGGTCTGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLGSTPG*WGLSAA
Trigger: TGCTGCACTCAGACCCCAGCATCCTGGGGTACTCCC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCCCGTCACCCCTTATTaGTTTAGAGAGAATATTGTC +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLPVTPY*FRENIV
Trigger: GACAATATTCTCTCTAAAGCAATAAGGGGTGACGGG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGGGGAGGAGGGGACCTaGCGTTCACTGTCCAAACAC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCGEEGT*RSLSKH
Trigger: GTGTTTGGACAGTGAACGCCAGGTCCCCTCCTCCCC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCAGCCAGCTTGTATTTaGGCATGGCAGGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLQPACI*AWQGTG
Trigger: CCCCGTCCCCTGCCATGCCCAAATACAAGCTGGCTG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAGCCAGGGGCTGCAGTaGCTCGTCCTGCAGCACCGC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQSQGLQ*LVLQHR
Trigger: GCGGTGCTGCAGGACGAGCCACTGCAGCCCCTGGCT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACTCCAGATCTCCGGGTaGGCCAGCAGAGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIILQISG*ASRGAH
Trigger: GTGGGCTCCTCTGCTGGCCCACCCGGAGATCTGGAG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGCGCACTGTGGGAGCTaGCGGCTGCTGACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQAHCGS*RLLTSW
Trigger: CCAGCTGGTCAGCAGCCGCCAGCTCCCACAGTGCGC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCCAGGAGCGTCTTCATaGACAGCCCCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLPGASS*TAPAWP
Trigger: TGGCCAAGCAGGGGCTGTCCATGAAGACGCTCCTGG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCGTCCAGGCTGCCCGTaGCGCTCAGCGTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQRPGCP*RSACAA
Trigger: TGCTGCACACGCTGAGCGCCACGGGCAGCCTGGACG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCTACAGCCCAGGGGCTaGGGGTCCGGGCTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQLQPRG*GSGLVS
Trigger: ACTGACCAGCCCGGACCCCCAGCCCCTGGGCTGTAG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGAGGAGGCGCATCCCTaGGGCCCCAGGCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQEEAHP*GPRQRT
Trigger: AGTCCTCTGCCTGGGGCCCCAGGGATGCGCCTCCTC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCCGCTTCACCAGCAGTaGCATGGAAAAGTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCPLHQQ*HGKVAG
Trigger: GCCGGCTACTTTTCCATGTCACTGCTGGTGAAGCGG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCCTCCCGCTTCGCCCTaGGCTCCACTTCTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQPPASP*APLLCA
Trigger: AGCGCAGAGAAGTGGAGCTCAGGGCGAAGCGGGAGG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGGGATTCCACCTCCTTaGGGATCGCTACAGCCATGG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCGIPPP*GSLQPW
Trigger: CCATGGCTGTAGCGATCCTCAAGGAGGTGGAATCCC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGTGCCTCGTGGTGGGTaGGTTAAGGTGCATCGTGTG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCVPRGG*VKVHRV
Trigger: CACACGATGCACCTTAACTCACCCACCACGAGGCAC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAGGGGCAGCCTCCTCTaGCCCAGGAGCCGCACACTT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQRGSLL*PRSRTL
Trigger: AAGTGTGCGGCTCCTGGGTCAGAGGAGGCTGCCCCT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTCCAGAGCCAGGGGCTaGAGTGGCTCGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQSRARG*SGSSCS
Trigger: GCTGCAGGACGAGCCACTGCAGCCCCTGGCTCTGGA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCATCGCCTTCTTCGATaGTTCTTTGGTAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRHRLLR*FFGKSS
Trigger: GCTGCTTTTACCAAAGAAGCATCGAAGAAGGCGATG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCTCCGAGCCTCCAGCTaGCCTCCTCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQLRASS*PPPPPP
Trigger: AGGAGGAGGAGGAGGAGGGCAGCTGGAGGCTCGGAG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGTGGAAGTCCAGCTCCTaGTCCTCAGGAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLWKSSS*SSGMGS
Trigger: GGAGCCCATTCCTGAGGAGCAGGAGCTGGACTTCCA...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTGGAAGTCCAGCTCCTaGTCCTCAGGAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCWKSSS*SSGMGS
Trigger: GGAGCCCATTCCTGAGGAGCAGGAGCTGGACTTCCA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCAGCTTCTCCGCCTCCTaGTGCAGGTGCTTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCSFSAS*CRCFKP
Trigger: AGGCTTGAAGCACCTGCAGCAGGAGGCGGAGAAGCT...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGACCAGCTGGAGAAACTaGTGGTGCTGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLTSWRN*WCCSCW
Trigger: CCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCTGGT...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGTCCTGGAATTTATGTTaGAGCTGGAGTTGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLSWNLC*SWSCSR
Trigger: TCTAGAACAACTCCAGCTGCAACATAAATTCCAGGA...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGTCTCCTCTCGACGCTTaGGTTCCTCTTCCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLSPLDA*VPLPPA
Trigger: AGCGGGAGGAAGAGGAACGCAAGCGTCGAGAGGAGA...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACGCTCGCCCTCCAGCTaGAACTCCAGGAGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIRSPSS*NSRSVF
Trigger: GAAGACGCTCCTGGAGTTGCAGCTGGAGGGCGAGCG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGAGCGTGTGCAGCATCTaGTCGCACCACTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLSVCSI*SHHWVK
Trigger: CTTCACCCAGTGGTGCGAGCAGATGCTGCACACGCT...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGTGGCGCTCAGCGTGTaGAGCATCTGCTCGCACCAC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIVALSV*SICSHH
Trigger: GTGGTGCGAGCAGATGCTGCACACGCTGAGCGCCAC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATGCTGGCTGGCTTTCTaGTTGGCCCTCCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIICWLAF*LALRSR
Trigger: CCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCATGCCTCCTGCTGCTaGTGCCGCTGCTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQHASCC*CRCWLA
Trigger: AGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGCATG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCTCAGCCATGCCTCCTaGTGCTGCTGCCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQLSHAS*CCCRCW
Trigger: CCAGCAGCGGCAGCAGCAGCAGGAGGCATGGCTGAG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCTGCAGCGAGGCGCTaGTCAGCCATGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISAARR*SAMPPA
Trigger: AGCAGGAGGCATGGCTGAGCAGCGCCTCGCTGCAGA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACGGGGCCGAGTTTGGTaGTGTGGTTGGCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIRGRVW*CGWPGR
Trigger: CCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACAGACAGGCCTCCTGTaGAAACTGCTGGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIQTGLL*KLLAPS
Trigger: GCTGGGGGCCAGCAGTTTGCACAGGAGGCCTGTCTG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCTCAGTGACAGGAGCTaGTCACAACAGGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLLSDRS*SQQVWR
Trigger: CCGCCAGACCTGTTGTGAGCAGCTCCTGTCACTGAG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTCTCAGGATACCAGCTaGGAAGCAGCCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCSQDTS*EAASGT
Trigger: GGTGCCAGAGGCTGCTTCCCAGCTGGTATCCTGAGA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCAAGGCACCTCGGGCTaGTTTCCCCCACAGGAATCA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLQGTSG*FPPQES
Trigger: TGATTCCTGTGGGGGAAACCAGCCCGAGGTGCCTTG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTCTCTGCTGCCATCGTaGGGCTGGGCGTGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCSLLPS*GWACLR
Trigger: TCTCAAACACGCCCAGCCCCACGATGGCAGCAGAGA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGTCGTGAAGGGGCCTTaGATCTCGCCCTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIVVKGP*ISPCGS
Trigger: GGACCCACAGGGCGAGATCCAAGGCCCCTTCACGAC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGAGGCGGCCCGAATCTaGCACCGACAAGGACCGGCT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQEAARI*HRQGPA
Trigger: AGCCGGTCCTTGTCGGTGCCAGATTCGGGCCGCCTC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTGGGTGAAGCCGTCCTaGGGCCTGGGAATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQWVKPS*GLGMPC
Trigger: GCAGGGCATTCCCAGGCCCCAGGACGGCTTCACCCA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGGCTGGCTTTCTGCTTaGCCCTCCGCTCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLGWLSA*PSAPGI
Trigger: AATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGCTGCCGCTGCTGGCTaGCTTTCTGCTTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQAAAAG*LSAWPS
Trigger: GGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGTTTGGTGCTGTGGTTaGCCTGGAAGGCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLVWCCG*PGRPSA
Trigger: TGCAGACGGCCTTCCAGGCCAACCACAGCACCAAAC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCCAAAATGGCAGCAGTaGGAGACGCCCCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLPKWQQ*ETPLTR
Trigger: TCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTGG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCCCAAAATGGCAGCAGTaGGAGACGCCCCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCPKWQQ*ETPLTR
Trigger: TCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTGG...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTTACAAAACCCAAAATaGGCGGAGACGAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGLQNPK*AETNPS
Trigger: ACTTGGGTTCGTCTCCGCCCATTTTGGGTTTTGTAA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCCAAAGTCTCTTTAGCTaGGGAGAAGAGACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPQSLFS*GEETGR
Trigger: TCTTCCTGTCTCTTCTCCCCAGCTAAAGAGACTTTG...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGACTCAGGCCCAAAGTTaGGTGTCTCTGCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLTQAQS*VSLLPS
Trigger: CGATGGCAGCAGAGACACTCAACTTTGGGCCTGAGT...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACCATCTCCTGTGTCGTaGAGGGGCCTTGGATCTCGC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIPSPVS*RGLGSR
Trigger: GCGAGATCCAAGGCCCCTTCACGACACAGGAGATGG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCTCTAGAATTGGACCCTaGGTCGAAGAGTTAATTGGT +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPSRIGP*VEELIG
Trigger: ACCAATTAACTCTTCGACTCAGGGTCCAATTCTAGA...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAGACAGGGAACACGGTaGCCCCTGCACCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQRQGTR*PLHPPQ
Trigger: TTGGGGTGGGTGCAGGGGTCACCGTGTTCCCTGTCT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGTTGAGTGTCTCTGCTaGCATCGTGGGGCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIVECLC*HRGAGR
Trigger: ACGCCCAGCCCCACGATGGCAGCAGAGACACTCAAC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGCCTCCTGCTGCAGGTaGTTCAAGCCTTCATCATCC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCASCCR*FKPSSS
Trigger: GGATGATGAAGGCTTGAAGCACCTGCAGCAGGAGGC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGAGCTGCTGCAGGAATaGCGTGAGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIELLQE*RELLLL
Trigger: CAGCAGCAGCAGCTCACGGCATTCCTGCAGCAGCTC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTGCTCCTCCTGCTGCTaGTGGCGGCGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQCSSCC*WRRFSS
Trigger: AGAGGAGAAGCGCCGCCAGCAGCAGCAGGAGGAGCA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCGCTCGCCCTCCAGCTaGAACTCCAGGAGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQRSPSS*NSRSVF
Trigger: GAAGACGCTCCTGGAGTTGCAGCTGGAGGGCGAGCG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCCTGGGGCCTGGGAATaGCCTGCAGCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQPGAWE*PAAASA
Trigger: TGCTGAAGCTGCTGCAGGGCATTCCCAGGCCCCAGG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGTGGCGCTCAGCGTGTaGAGCATCTGCTCGCACCAC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQVALSV*SICSHH
Trigger: GTGGTGCGAGCAGATGCTGCACACGCTGAGCGCCAC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTGCTGGCTGGCTTTCTaGTTGGCCCTCCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQCWLAF*LALRSR
Trigger: CCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATGCTGCTGCTGCCGCTaGTGGCTGGCTTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIICCCCR*WLAFCL
Trigger: CAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAATGCTGGGGTCTGAGTaGAGCATCAGTGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIMLGSE*SISARL
Trigger: GAGGCGGGCACTGATGCTGCACTCAGACCCCAGCAT...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGAACCAGAGTCCTGCTaGCCCACCCTGCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQEPESC*PTLPAR
Trigger: TCTGGCTGGCAGGGTGGGGCAGCAGGACTCTGGTTC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAATAAGGTCAGGGCAATaGAGGCTGATGGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIIRSGQ*RLMGAR
Trigger: CCGCGCCCCCATCAGCCTCCATTGCCCTGACCTTAT...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGACCTCAGTAGAGCCTaGGAGGGACCTTCACATCTG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCDLSRA*EGPSHL
Trigger: CAGATGTGAAGGTCCCTCCCAGGCTCTACTGAGGTC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGGCAGGGGCTGGTGCTaGAGTGAACGAGGGTACCCA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQGRGWC*SERGYP
Trigger: TGGGTACCCTCGTTCACTCCAGCACCAGCCCCTGCC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGGGGAGGAGGGGACCTaGCGTTCACTGTCCAAACAC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIGEEGT*RSLSKH
Trigger: GTGTTTGGACAGTGAACGCCAGGTCCCCTCCTCCCC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCAGCTCTGGCTGCGCTaGATTTCCCGGGGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQQLWLR*ISRGLR
Trigger: ACGAAGCCCCCGGGAAATCCAGCGCAGCCAGAGCTG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACTGTCATCCCAGCTCTaGCTGCGCTGGATTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIILSSQL*LRWISR
Trigger: CCGGGAAATCCAGCGCAGCCAGAGCTGGGATGACAG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGTCCAGGCACCACTCTaGGAGCCCATCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIVQAPL*EPILVL
Trigger: GAGGACAAGGATGGGCTCCCAGAGTGGTGCCTGGAC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGATCATCTTCGGCCGCTaGGGGCTCTTTCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLIIFGR*GLFLCS
Trigger: ACTGCAGAGAAAGAGCCCCCAGCGGCCGAAGATGAT...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCACCCCGGGACTCAGCTaGATCCCCCGAATATCATCT +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCTPGLS*IPRISS
Trigger: AGATGATATTCGGGGGATCCAGCTGAGTCCCGGGGT...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTAGTCGAAGAGTTAATTaGTATGTCCCAAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSRRVN*YVPKTG
Trigger: GCCAGTCTTTGGGACATACCAATTAACTCTTCGACT...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACCAGGAGCGTCTTCATaGACAGCCCCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIPGASS*TAPAWP
Trigger: TGGCCAAGCAGGGGCTGTCCATGAAGACGCTCCTGG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGGCCGACCCGATAGGTaGCTGTATGAGTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLGRPDR*LYESLR
Trigger: TCTCAGTGACTCATACAGCCACCTATCGGGTCGGCC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGCTCCAGGAATTGTTTaGCAAATTCTTTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGAPGIV*QILWLP
Trigger: TGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACCGAGTTTGGTGCTGTaGTTGGCCTGGAAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIPSLVL*LAWKAV
Trigger: GACGGCCTTCCAGGCCAACCACAGCACCAAACTCGG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGAGTACCCCAGGATGCTaGGGTCTGAGTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLSTPGC*GLSAAS
Trigger: TGATGCTGCACTCAGACCCCAGCATCCTGGGGTACT...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGCTGGGGGTCCGGGCTaGTCAGTAGTCATCCACGCT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQAGGPG*SVVIHA
Trigger: AGCGTGGATGACTACTGACCAGCCCGGACCCCCAGC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATGCTCACAACAGGTCTaGCGGGTGGGGCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIICSQQV*RVGLRQ
Trigger: CTGTCTGAGCCCCACCCGCCAGACCTGTTGTGAGCA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGGCAAGGCAGAGAGCTaGGGCTTTCAGGTTCAAACC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCGKAES*GFQVQT
Trigger: GGTTTGAACCTGAAAGCCCCAGCTCTCTGCCTTGCC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGGCAAGGCAGAGAGCTaGGGCTTTCAGGTTCAAACC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLGKAES*GFQVQT
Trigger: GGTTTGAACCTGAAAGCCCCAGCTCTCTGCCTTGCC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTCCTGCCCCCTTCACTaGAGAAACAGCTCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCSCPLH*RNSSAF
Trigger: GAAGGCTGAGCTGTTTCTCCAGTGAAGGGGGCAGGA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACCACATCTTACGAGCTaGCTACAGGTTGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIPHLTS*LQVGAP
Trigger: CGGGGCCCCAACCTGTAGCCAGCTCGTAAGATGTGG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATGGGAAAGACCCAGCTaGGAAGCAGCCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIWERPS*EAASGT
Trigger: GGTGCCAGAGGCTGCTTCCCAGCTGGGTCTTTCCCA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646601.1
CDS-3UTR TCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCCATCCCGCCTTGCTaGCTTCTCAAACCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISIPPC*LLKPPL
Trigger: GAGAGGCGGTTTGAGAAGTCAGCAAGGCGGGATGGA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCCATCTCCTGTGTCGTaGAGGGGCCTTGGATCTCGC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQPSPVS*RGLGSR
Trigger: GCGAGATCCAAGGCCCCTTCACGACACAGGAGATGG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGTGCCTCGTGGTGGGTaGGTTAAGGTGCATCGTGTG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIVPRGG*VKVHRV
Trigger: CACACGATGCACCTTAACTCACCCACCACGAGGCAC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGGAATAAGAAGTGGGTaGGCAATAGAAGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCGIRSG*AIEGAA
Trigger: GGCTGCCCCTTCTATTGCTCACCCACTTCTTATTCC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGAGCTGCTGCAGGAATaGCGTGAGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQELLQE*RELLLL
Trigger: CAGCAGCAGCAGCTCACGGCATTCCTGCAGCAGCTC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAAGCGTGTGCAGCATCTaGTCGCACCACTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISVCSI*SHHWVK
Trigger: CTTCACCCAGTGGTGCGAGCAGATGCTGCACACGCT...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGGCCTGTGTCCCCACTaGCCCAAAATAACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCGLCPH*PKITVC
Trigger: ACACACTGTTATTTTGGGGCAGTGGGGACACAGGCC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACTCAGTGACAGGAGCTaGTCACAACAGGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIILSDRS*SQQVWR
Trigger: CCGCCAGACCTGTTGTGAGCAGCTCCTGTCACTGAG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGCTCAGCCTTCTCTCTaGAGCCTCTGGAGCAATCAT +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCAQPSL*SLWSNH
Trigger: ATGATTGCTCCAGAGGCTGCAGAGAGAAGGCTGAGC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTCCTCTAAGGGAGGATaGAGGGGACTTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCSSKGG*RGLSGG
Trigger: TCCTCCTGAAAGTCCCCTCCATCCTCCCTTAGAGGA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGATAAGGTCAGGGCAATaGAGGCTGATGGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQIRSGQ*RLMGAR
Trigger: CCGCGCCCCCATCAGCCTCCATTGCCCTGACCTTAT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCTGGGAAGCAGCCTCTaGCACCATCAGGTGGAAATA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLLGSSL*HHQVEI
Trigger: TATTTCCACCTGATGGTGCCAGAGGCTGCTTCCCAG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACAAGGCACCTCGGGCTaGTTTCCCCCACAGGAATCA +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIQGTSG*FPPQES
Trigger: TGATTCCTGTGGGGGAAACCAGCCCGAGGTGCCTTG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGGGGAGGAGGGGACCTaGCGTTCACTGTCCAAACAC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQGEEGT*RSLSKH
Trigger: GTGTTTGGACAGTGAACGCCAGGTCCCCTCCTCCCC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCTGTCATCCCAGCTCTaGCTGCGCTGGATTTCCCGG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQLSSQL*LRWISR
Trigger: CCGGGAAATCCAGCGCAGCCAGAGCTGGGATGACAG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTCACCAGCAGTGACATaGAAAAGTAGCCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCSPAVT*KSSRPG
Trigger: TCCAGGCCGGCTACTTTTCCATGTCACTGCTGGTGA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGTCACCAGCAGTGACATaGAAAAGTAGCCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLSPAVT*KSSRPG
Trigger: TCCAGGCCGGCTACTTTTCCATGTCACTGCTGGTGA...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTTCTTCAGCCGCTCCTaGTCCATGTTTCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCFFSRS*SMFPSS
Trigger: ACTGCTGGGAAACATGGACCAGGAGCGGCTGAAGAA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGTATGTCCCAAAGACTaGCCTCACCACCTGACTGTG +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLVCPKD*PHHLTV
Trigger: CACAGTCAGGTGGTGAGGCCAGTCTTTGGGACATAC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGTATGTCCCAAAGACTaGCCTCACCACCTGACTGTG +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCVCPKD*PHHLTV
Trigger: CACAGTCAGGTGGTGAGGCCAGTCTTTGGGACATAC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGAATTTATGTTGCAGCTaGAGTTGTTCTAGAATTGGA +
Preference number: 4 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLNLCCS*SCSRIG
Trigger: TCCAATTCTAGAACAACTCCAGCTGCAACATAAATT...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGGCTGGCTTTCTGCTTaGCCCTCCGCTCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIGWLSA*PSAPGI
Trigger: AATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCCGAGTTTGGTGCTGTaGTTGGCCTGGAAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQPSLVL*LAWKAV
Trigger: GACGGCCTTCCAGGCCAACCACAGCACCAAACTCGG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGTTTGTAACAAGTGCTaGGGACCCCGCCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQVCNKC*GPRPCL
Trigger: GAGGCAGGGGCGGGGTCCCCAGCACTTGTTACAAAC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCCATGGCCCGCCTTCTaGGGGGTAAGTATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQPWPAF*GVSMAL
Trigger: CAAGGCCATACTTACCCCCCAGAAGGCGGGCCATGG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTGCTCACAACAGGTCTaGCGGGTGGGGCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQCSQQV*RVGLRQ
Trigger: CTGTCTGAGCCCCACCCGCCAGACCTGTTGTGAGCA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAGTCTCCCCCACACCTaGCAAGAGGGAAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQSLPHT*QEGRGA
Trigger: AGCTCCCCTTCCCTCTTGCCAGGTGTGGGGGAGACT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCCCTCTCTGGGAGGCTaGGACAGGAGGTGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQPSLGG*DRRCSE
Trigger: TTCACTACACCTCCTGTCTCAGCCTCCCAGAGAGGG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGGACCTTGTTCTCCTTaGCGTAGAGAGCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLGPCSP*RREPAF
Trigger: AAATGCTGGCTCTCTACGTCAAGGAGAACAAGGTCC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTCCATCCCGCCTTGCTaGCTTCTCAAACCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQSIPPC*LLKPPL
Trigger: GAGAGGCGGTTTGAGAAGTCAGCAAGGCGGGATGGA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGGGATTCCACCTCCTTaGGGATCGCTACAGCCATGG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQGIPPP*GSLQPW
Trigger: CCATGGCTGTAGCGATCCTCAAGGAGGTGGAATCCC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAAGAAACTGCTGGTGCTaGAGCTGCTGGTACAAGGCC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIRNCWC*SCWYKA
Trigger: GGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCT...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACAGGGACCGCCTGCTaGTGCTGTAGCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQTGTAC*CCSNFS
Trigger: GCTGAAGTTGCTACAGCAGCAGCAGGCGGTCCCTGT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCACCAGAAGATCCGTaGAGGGAGTACCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISPEDP*REYPRM
Trigger: CATCCTGGGGTACTCCCTGCACGGATCTTCTGGTGA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGGTCCATTCGCCGGATaGTGTCTCTGGGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQGPFAG*CLWASA
Trigger: TGCTGATGCCCAGAGACACCATCCGGCGAATGGACC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAAGCTGGAGAAACTGCTaGTGCTGCAGCTGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISWRNC*CCSCWY
Trigger: GTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCT...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCCGTCTTTTTGCGAATaGGCCGACCCGATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQPSFCE*ADPIGG
Trigger: GCCACCTATCGGGTCGGCCCATTCGCAAAAAGACGG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAAAGTTGAGTGTCTCTaGTGCCATCGTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQKVECL*CHRGAG
Trigger: CCCAGCCCCACGATGGCAGCAGAGACACTCAACTTT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTTCTCCGCCTCCTGCTaGAGGTGCTTCAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQFSASC*RCFKPS
Trigger: TGAAGGCTTGAAGCACCTGCAGCAGGAGGCGGAGAA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGGCCTGGAACCACTCTaGCATCTCCTGTGTCGTGAA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQGLEPL*HLLCRE
Trigger: TTCACGACACAGGAGATGGCAGAGTGGTTCCAGGCC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATGGAGAAACTGCTGGTaGTGCAGCTGCTGGTACAAG +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIWRNCW*CSCWYK
Trigger: CTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACTTCCTCCGTCTTTTTaGGAATGGGCCGACCCGATA +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIILPPSF*EWADPI
Trigger: TATCGGGTCGGCCCATTCGCAAAAAGACGGAGGAAG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTCACCAGAAGATCCGTaGAGGGAGTACCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQSPEDP*REYPRM
Trigger: CATCCTGGGGTACTCCCTGCACGGATCTTCTGGTGA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCAGCCGAGGCCAGGATaGACGTTCAGGGCAAAGATA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQQPRPG*TFRAKI
Trigger: TATCTTTGCCCTGAACGTCCATCCTGGCCTCGGCTG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGATCATCTTCGGCCGCTaGGGGCTCTTTCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQIIFGR*GLFLCS
Trigger: ACTGCAGAGAAAGAGCCCCCAGCGGCCGAAGATGAT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCACCAGCAGTGACATaGAAAAGTAGCCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISPAVT*KSSRPG
Trigger: TCCAGGCCGGCTACTTTTCCATGTCACTGCTGGTGA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCAATTTATGTTGCAGCTaGAGTTGTTCTAGAATTGGA +
Preference number: 4 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPNLCCS*SCSRIG
Trigger: TCCAATTCTAGAACAACTCCAGCTGCAACATAAATT...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGGCCGACCCGATAGGTaGCTGTATGAGTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQGRPDR*LYESLR
Trigger: TCTCAGTGACTCATACAGCCACCTATCGGGTCGGCC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAGCCACGCTGTTCACTaGCAGGGAGAAGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQSHAVH*QGEVSL
Trigger: CAGAGAAACTTCTCCCTGTCAGTGAACAGCGTGGCT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCATGGGAGGAGCTGGATaGGAAACCCAAAAGACAAAA +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCMGGAG*ETQKTK
Trigger: TTTTGTCTTTTGGGTTTCTCATCCAGCTCCTCCCAT...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGATGGGAGGAGCTGGATaGGAAACCCAAAAGACAAAA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLMGGAG*ETQKTK
Trigger: TTTTGTCTTTTGGGTTTCTCATCCAGCTCCTCCCAT...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCAATCAAATTCAAACTTaGGCCGCCGTTCCCCATGTT +
Preference number: 4 (lower is better)
Translates to: QPYPTVKSASYQTRKATCNQIQT*AAVPHV
Trigger: AACATGGGGAACGGCGGCGCAAGTTTGAATTTGATT...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTGGAGAAACTGCTGGTaGTGCAGCTGCTGGTACAAG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQWRNCW*CSCWYK
Trigger: CTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCTTCCTCCGTCTTTTTaGGAATGGGCCGACCCGATA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQLPPSF*EWADPI
Trigger: TATCGGGTCGGCCCATTCGCAAAAAGACGGAGGAAG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCTGGGAAGCAGCCTCTaGCACCATCAGGTGGAAATA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQLGSSL*HHQVEI
Trigger: TATTTCCACCTGATGGTGCCAGAGGCTGCTTCCCAG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTCAAATCCAGGGGCTTaGTCTGGGGAGAAACCCAGT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQSNPGA*SGEKPS
Trigger: ACTGGGTTTCTCCCCAGACCAAGCCCCTGGATTTGA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATTGGATCTCGCCCTGTaGGTCCTTGTAGAACCACTT +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIILDLAL*VLVEPL
Trigger: AAGTGGTTCTACAAGGACCCACAGGGCGAGATCCAA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGTATGTCCCAAAGACTaGCCTCACCACCTGACTGTG +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQVCPKD*PHHLTV
Trigger: CACAGTCAGGTGGTGAGGCCAGTCTTTGGGACATAC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGTTACAAAACCCAAAATaGGCGGAGACGAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLLQNPK*AETNPS
Trigger: ACTTGGGTTCGTCTCCGCCCATTTTGGGTTTTGTAA...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCCCGTCACCCCTTATTaGTTTAGAGAGAATATTGTC +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLPVTPY*FRENIV
Trigger: GACAATATTCTCTCTAAAGCAATAAGGGGTGACGGG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAAGGGACCTTCACATCTaGGAAAGACCCTTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIRDLHI*ERPLRR
Trigger: TCTCCTTAAGGGTCTTTCCCAGATGTGAAGGTCCCT...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGCTCCAGGAATTGTTTaGCAAATTCTTTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLAPGIV*QILWLP
Trigger: TGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGTCCTGGAATTTATGTTaGAGCTGGAGTTGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLSWNLC*SWSCSR
Trigger: TCTAGAACAACTCCAGCTGCAACATAAATTCCAGGA...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACAAAGTCTCTTTAGCTaGGGAGAAGAGACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIQSLFS*GEETGR
Trigger: TCTTCCTGTCTCTTCTCCCCAGCTAAAGAGACTTTG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAATCAAATTCAAACTTaGGCCGCCGTTCCCCATGTT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQNQIQT*AAVPHV
Trigger: AACATGGGGAACGGCGGCGCAAGTTTGAATTTGATT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAAGTCGAAGAGTTAATTaGTATGTCCCAAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISRRVN*YVPKTG
Trigger: GCCAGTCTTTGGGACATACCAATTAACTCTTCGACT...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR TCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTCTAGAATTGGACCCTaGGTCGAAGAGTTAATTGGT +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQSRIGP*VEELIG
Trigger: ACCAATTAACTCTTCGACTCAGGGTCCAATTCTAGA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCCTGGAATTTATGTTaGAGCTGGAGTTGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISWNLC*SWSCSR
Trigger: TCTAGAACAACTCCAGCTGCAACATAAATTCCAGGA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR GCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCCCGTCACCCCTTATTaGTTTAGAGAGAATATTGTC +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQPVTPY*FRENIV
Trigger: GACAATATTCTCTCTAAAGCAATAAGGGGTGACGGG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGCTCCAGGAATTGTTTaGCAAATTCTTTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQAPGIV*QILWLP
Trigger: TGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CCA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAAATTTATGTTGCAGCTaGAGTTGTTCTAGAATTGGA +
Preference number: 4 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIINLCCS*SCSRIG
Trigger: TCCAATTCTAGAACAACTCCAGCTGCAACATAAATT...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp GGGCCCCAGGCAGAGGACTCAAGCGGGTGGGCGGGGTCCAGGTGCTaGGGTGTTGTCACTGGCTGGGAGGGAGGCTGGCCCGGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: GPQAEDSSGWAGSRC*GVVTGWEGGWPGLV
Trigger: CACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAGCACCTGGACCCCGCCCACCCGCTTGAGTCCTCTGCCTGGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp CGGGCAGCCCCATGGCTGAGCGGGAGGGCAGTGGCGGCTGCAGAGTaGCGCAGGCCCTGGGTCTGCATGGCAGCCGTGAACTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RAAPWLSGRAVAAAE*RRPWVCMAAVNCSS
Trigger: GGAGGAGCAGTTCACGGCTGCCATGCAGACCCAGGGCCTGCGCCACTCTGCAGCCGCCACTGCCCTCCCGCTCAGCCATGGGGCTGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp CCACTTCCGGGCAGCCCCATGGCTGAGCGGGAGGGCAGTGGCGGCTaGAGAGTGGCGCAGGCCCTGGGTCTGCATGGCAGCCGTGAACTG +
Preference number: 5 (lower is better)
Translates to: PLPGSPMAEREGSGG*RVAQALGLHGSREL
Trigger: CAGTTCACGGCTGCCATGCAGACCCAGGGCCTGCGCCACTCTGCAGCCGCCACTGCCCTCCCGCTCAGCCATGGGGCTGCCCGGAAGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp GCGGTGTTGTCACTGGCTGGGAGGGAGGCTGGCCCGGCTTGGTGCTaGAGCTCCCATCAACTCCAGGACGCCACAGTCGCGGGCGGCGCG +
Preference number: 5 (lower is better)
Translates to: AVLSLAGREAGPAWC*SSHQLQDATVAGGA
Trigger: CGCGCCGCCCGCGACTGTGGCGTCCTGGAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678049.1
CDS CCA 90 bp CTGCACTCGGTGGTTGGGGGCCTGGGCCCGAGCTGGCTCCCGAGGTaGGGGCTGTTTGTGCAGCTGCCGCTCGCCCTCCAGCTGCAACTC +
Preference number: 5 (lower is better)
Translates to: LHSVVGGLGPSWLPR*GLFVQLPLALQLQL
Trigger: GAGTTGCAGCTGGAGGGCGAGCGGCAGCTGCACAAACAGCCCCCACCTCGGGAGCCAGCTCGGGCCCAGGCCCCCAACCACCGAGTGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp GTGCCCGCCTCTTGGCCTTGCTGCCCTCCCCGGGGCCGAGTTTGGTaGTGTGGTTGGCCTGGAAGGCCGTCTGCAGCGAGGCGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: VPASWPCCPPRGRVW*CGWPGRPSAARRCS
Trigger: TGAGCAGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGGCCAAGAGGCGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp GCGGTGTTGTCACTGGCTGGGAGGGAGGCTGGCCCGGCTTGGTGCTaGAGCTCCCATCAACTCCAGGACGCCACAGTCGGGCTGCGGCGG +
Preference number: 5 (lower is better)
Translates to: AVLSLAGREAGPAWC*SSHQLQDATVGLRR
Trigger: CCGCCGCAGCCCGACTGTGGCGTCCTGGAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646601.1
CDS GCA 90 bp GCTGCGGTGTTGTCACTGGCTGGGAGGGAGGCTGGCCCGGCTTGGTaGTGCAGCTCCCATCAACTCCAGGACGCCACAGTCGCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: AAVLSLAGREAGPAW*CSSHQLQDATVAGG
Trigger: GCCGCCCGCGACTGTGGCGTCCTGGAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678049.1
CDS CCA 90 bp GCCTTGCTGCCCTCCCCGGGGCCGAGTTTGGTGCTGTGGTTGGCCTaGAAGGCCGTCTGCAGCGAGGCGCTGCTCAGCCATGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ALLPSPGPSLVLWLA*KAVCSEALLSHASC
Trigger: GCAGGAGGCATGGCTGAGCAGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp TCAGTGCCCGCCTCTTGGCCTTGCTGCCCTCCCCGGGGCCGAGTTTaGTGCTGTGGTTGGCCTGGAAGGCCGTCTGCAGCGAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: SVPASWPCCPPRGRV*CCGWPGRPSAARRC
Trigger: GCAGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGGCCAAGAGGCGGGCACTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp GCGCACTGTGGGAGCTGGCGGCTGCAAATGGGACAGTGGAGATGGTaGGCCACAGAGCCAGCGCCGGGCCTTCTCCCAGCCCACCCCAGG +
Preference number: 5 (lower is better)
Translates to: AHCGSWRLQMGQWRW*ATEPAPGLLPAHPR
Trigger: CCTGGGGTGGGCTGGGAGAAGGCCCGGCGCTGGCTCTGTGGCCCACCATCTCCACTGTCCCATTTGCAGCCGCCAGCTCCCACAGTGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472105.1
CDS-3UTR CAA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCGAGGTGGGGGCTGTTaGTGCAGCTGCCGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLRGGGC*CSCRSP
Trigger: GGGCGAGCGGCAGCTGCACAAACAGCCCCCACCTCG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGAGGCTCCCGCCGCTCTaGGGGGTGTCCTCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLRLPPL*GVSSQS
Trigger: GCTCTGGGAGGACACCCCCAAGAGCGGCGGGAGCCT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp AGCGGGAGGGCAGTGGCGGCTGCAGAGTGGCGCAGGCCCTGGGTCTaGATGGCAGCCGTGAACTGCTCCTCCTCCAAGGAGCTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SGRAVAAAEWRRPWV*MAAVNCSSSKELSC
Trigger: GCAGGACAGCTCCTTGGAGGAGGAGCAGTTCACGGCTGCCATGCAGACCCAGGGCCTGCGCCACTCTGCAGCCGCCACTGCCCTCCCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp AGCGCGCACTGTGGGAGCTGGCGGCTGCTGACCAGCTGGAGAAACTaGTGGTGCTGCAGCTGCTGGTACAAGGCCGCCGCGGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SAHCGSWRLLTSWRN*WCCSCWYKAAAASS
Trigger: GGAGCTGGCCGCGGCGGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCTGGTCAGCAGCCGCCAGCTCCCACAGTGCGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp GCCTGGGCCCGAGCTGGCTCCCGAGGTGGGGGCTGTTTGTGCAGCTaGCGCTCGCCCTCCAGCTGCAACTCCAGGAGCGTCTTCATGGAC +
Preference number: 5 (lower is better)
Translates to: AWARAGSRGGGCLCS*RSPSSCNSRSVFMD
Trigger: GTCCATGAAGACGCTCCTGGAGTTGCAGCTGGAGGGCGAGCGGCAGCTGCACAAACAGCCCCCACCTCGGGAGCCAGCTCGGGCCCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp GCTGCGGTGTTGTCACTGGCTGGGAGGGAGGCTGGCCCGGCTTGGTaGTGCAGCTCCCATCAACTCCAGGACGCCACAGTCGGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: AAVLSLAGREAGPAW*CSSHQLQDATVGLR
Trigger: CCGCAGCCCGACTGTGGCGTCCTGGAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646601.1
CDS CCA 90 bp TGGCTGAGCGGGAGGGCAGTGGCGGCTGCAGAGTGGCGCAGGCCCTaGGTCTGCATGGCAGCCGTGAACTGCTCCTCCTCCAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: WLSGRAVAAAEWRRP*VCMAAVNCSSSKEL
Trigger: CAGCTCCTTGGAGGAGGAGCAGTTCACGGCTGCCATGCAGACCCAGGGCCTGCGCCACTCTGCAGCCGCCACTGCCCTCCCGCTCAGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp CGCCTCTTGGCCTTGCTGCCCTCCCCGGGGCCGAGTTTGGTGCTGTaGTTGGCCTGGAAGGCCGTCTGCAGCGAGGCGCTGCTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: RLLALLPSPGPSLVL*LAWKAVCSEALLSH
Trigger: ATGGCTGAGCAGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGGCCAAGAGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp GCGGGGTCCAGGTGCTGCGGTGTTGTCACTGGCTGGGAGGGAGGCTaGCCCGGCTTGGTGCTGCAGCTCCCATCAACTCCAGGACGCCAC +
Preference number: 5 (lower is better)
Translates to: AGSRCCGVVTGWEGG*PGLVLQLPSTPGRH
Trigger: GTGGCGTCCTGGAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAGCACCTGGACCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGACGCGGCCCCACATCTaGATCACCTCGCCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLTRPHI*ITSPSG
Trigger: GCCGCTGGGCGAGGTGATCAAGATGTGGGGCCGCGT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS TCA 90 bp TGGCGGCTGCAGAGTGGCGCAGGCCCTGGGTCTGCATGGCAGCCGTaGACTGCTCCTCCTCCAAGGAGCTGTCCTGCAGGGAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: WRLQSGAGPGSAWQP*TAPPPRSCPAGRPP
Trigger: TGGTGGCCTCCCTGCAGGACAGCTCCTTGGAGGAGGAGCAGTTCACGGCTGCCATGCAGACCCAGGGCCTGCGCCACTCTGCAGCCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp TCCTCAGTCAGCGGCTCCAGAGCCAGGGGCTGCAGTGGCTCGTCCTaGAGCACCGCGGCGAACTCCTTGTCCTGCAGCTCTTCCGGGACC +
Preference number: 5 (lower is better)
Translates to: SSVSGSRARGCSGSS*STAANSLSCSSSGT
Trigger: GGTCCCGGAAGAGCTGCAGGACAAGGAGTTCGCCGCGGTGCTGCAGGACGAGCCACTGCAGCCCCTGGCTCTGGAGCCGCTGACTGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000471340.2
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp GTGGTTGGCCTGGAAGGCCGTCTGCAGCGAGGCGCTGCTCAGCCATaGCTCCTGCTGCTGCTGCCGCTGCTGGCTGGCTTTCTGCTTGGC +
Preference number: 5 (lower is better)
Translates to: VVGLEGRLQRGAAQP*LLLLLPLLAGFLLG
Trigger: GCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGCATGGCTGAGCAGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp GCGCACTGTGGGAGCTGGCGGCTGCTGACCAGCTGGAGAAACTGCTaGTGCTGCAGCTGCTGGTACAAGGCCGCCGCGGCCAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: AHCGSWRLLTSWRNC*CCSCWYKAAAASSC
Trigger: ACAGGAGCTGGCCGCGGCGGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCTGGTCAGCAGCCGCCAGCTCCCACAGTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp TCTTGGCCTTGCTGCCCTCCCCGGGGCCGAGTTTGGTGCTGTGGTTaGCCTGGAAGGCCGTCTGCAGCGAGGCGCTGCTCAGCCATGCCT +
Preference number: 5 (lower is better)
Translates to: SWPCCPPRGRVWCCG*PGRPSAARRCSAMP
Trigger: AGGCATGGCTGAGCAGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGGCCAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp GGTGCTGCGGTGTTGTCACTGGCTGGGAGGGAGGCTGGCCCGGCTTaGTGCTGCAGCTCCCATCAACTCCAGGACGCCACAGTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: GAAVLSLAGREAGPA*CCSSHQLQDATVGL
Trigger: CAGCCCGACTGTGGCGTCCTGGAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646601.1
CDS CCA 90 bp TCAAGCGGGTGGGCGGGGTCCAGGTGCTGCGGTGTTGTCACTGGCTaGGAGGGAGGCTGGCCCGGCTTGGTGCTGCAGCTCCCATCAACT +
Preference number: 5 (lower is better)
Translates to: SSGWAGSRCCGVVTG*EGGWPGLVLQLPST
Trigger: AGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAGCACCTGGACCCCGCCCACCCGCTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGGCAGGGCAACCACCCTaGGCCCGGGGCTCACCTGGC +
Preference number: 5 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRAGQPP*ARGSPG
Trigger: GCCAGGTGAGCCCCGGGCCAAGGGTGGTTGCCCTGC...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275732.5
CDS-3UTR CAA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCCAGGTGCTGCGGTGTaGTCACTGGCTGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLPGAAV*SLAGRE
Trigger: CTCCCTCCCAGCCAGTGACAACACCGCAGCACCTGG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp GCTGCAGAGTGGCGCAGGCCCTGGGTCTGCATGGCAGCCGTGAACTaGTCCTCCTCCAAGGAGCTGTCCTGCAGGGAGGCCACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: AAEWRRPWVCMAAVN*SSSKELSCREATSF
Trigger: GAAGCTGGTGGCCTCCCTGCAGGACAGCTCCTTGGAGGAGGAGCAGTTCACGGCTGCCATGCAGACCCAGGGCCTGCGCCACTCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp CACTGTGGGAGCTGGCGGCTGCTGACCAGCTGGAGAAACTGCTGGTaGTGCAGCTGCTGGTACAAGGCCGCCGCGGCCAGCTCCTGTTGC +
Preference number: 5 (lower is better)
Translates to: HCGSWRLLTSWRNCW*CSCWYKAAAASSCC
Trigger: GCAACAGGAGCTGGCCGCGGCGGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCTGGTCAGCAGCCGCCAGCTCCCACAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp TCCCGAGGTGGGGGCTGTTTGTGCAGCTGCCGCTCGCCCTCCAGCTaGAACTCCAGGAGCGTCTTCATGGACAGCCCCTGCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SRGGGCLCSCRSPSS*NSRSVFMDSPCLAR
Trigger: CCTGGCCAAGCAGGGGCTGTCCATGAAGACGCTCCTGGAGTTGCAGCTGGAGGGCGAGCGGCAGCTGCACAAACAGCCCCCACCTCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp GTTTGGTGCTGTGGTTGGCCTGGAAGGCCGTCTGCAGCGAGGCGCTaGTCAGCCATGCCTCCTGCTGCTGCTGCCGCTGCTGGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: VWCCGWPGRPSAARR*SAMPPAAAAAAGWL
Trigger: AAGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGCATGGCTGAGCAGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp TACAAGGCCGCCGCGGCCAGCTCCTGTTGCTTCTTCAGCCGCTCCTaGTCCATGTTTCCCAGCAGTGGGGGAGGTGAGGGCCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: YKAAAASSCCFFSRS*SMFPSSGGGEGPGA
Trigger: TGCCCCAGGGCCCTCACCTCCCCCACTGCTGGGAAACATGGACCAGGAGCGGCTGAAGAAGCAACAGGAGCTGGCCGCGGCGGCCTTGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000472105.1
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGACCGCGGCGAACTCCTaGTCCTGCAGCTCTTCCGGG +
Preference number: 5 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLTAANS*SCSSSG
Trigger: CCCGGAAGAGCTGCAGGACAAGGAGTTCGCCGCGGT...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTGTCGTGAAGGGGCCTaGGATCTCGCCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLCREGA*DLALWV
Trigger: GACCCACAGGGCGAGATCCAAGGCCCCTTCACGACA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp TGTGGGAGCTGGCGGCTGCTGACCAGCTGGAGAAACTGCTGGTGCTaGAGCTGCTGGTACAAGGCCGCCGCGGCCAGCTCCTGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: CGSWRLLTSWRNCWC*SCWYKAAAASSCCF
Trigger: GAAGCAACAGGAGCTGGCCGCGGCGGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCTGGTCAGCAGCCGCCAGCTCCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp TCTCTGTTCCTCCTCAGTCAGCGGCTCCAGAGCCAGGGGCTGCAGTaGCTCGTCCTGCAGCACCGCGGCGAACTCCTTGTCCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SLFLLSQRLQSQGLQ*LVLQHRGELLVLQL
Trigger: GAGCTGCAGGACAAGGAGTTCGCCGCGGTGCTGCAGGACGAGCCACTGCAGCCCCTGGCTCTGGAGCCGCTGACTGAGGAGGAACAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000471340.2
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp CGGTGTCAGGTCCCCCAGAGCTGCCTTTTCTCGGAGCGCGCACTGTaGGAGCTGGCGGCTGCTGACCAGCTGGAGAAACTGCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: RCQVPQSCLFSERAL*ELAAADQLEKLLVL
Trigger: CAGCACCAGCAGTTTCTCCAGCTGGTCAGCAGCCGCCAGCTCCCACAGTGCGCGCTCCGAGAAAAGGCAGCTCTGGGGGACCTGACACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp GCTGTGGCTGCCCTGGCCTACAGCCCAGGGGCTGGGGGTCCGGGCTaGTCAGTAGTCATCCACGCTCTCGATCTCACCAGAAGATCCGTG +
Preference number: 5 (lower is better)
Translates to: AVAALAYSPGAGGPG*SVVIHALDLTRRSV
Trigger: CACGGATCTTCTGGTGAGATCGAGAGCGTGGATGACTACTGACCAGCCCGGACCCCCAGCCCCTGGGCTGTAGGCCAGGGCAGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp CGGTGTCAGGTCCCCCAGAGCTGCCTTTTCTCGGAGCGCGCACTGTaGGAGCTGGCGGCTGCAAATGGGACAGTGGAGATGGTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: RCQVPQSCLFSERAL*ELAAANGTVEMVGH
Trigger: GTGGCCCACCATCTCCACTGTCCCATTTGCAGCCGCCAGCTCCCACAGTGCGCGCTCCGAGAAAAGGCAGCTCTGGGGGACCTGACACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472105.1
CDS-3UTR CAA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTCAGCCAGCTTGTATTaGGGCATGGCAGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLSASLY*GMAGDG
Trigger: CCCGTCCCCTGCCATGCCCAAATACAAGCTGGCTGA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGTTCTCCTCTCGACGCTaGCGTTCCTCTTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLFSSRR*RSSSSR
Trigger: GCGGGAGGAAGAGGAACGCAAGCGTCGAGAGGAGAA...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTCCCCGGGGCCGAGTTaGGTGCTGTGGTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSPGPS*VLWLAW
Trigger: CCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGAAAGCCACCCACTCCTaGCCTTTGAGGCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLKATHS*PLRPLL
Trigger: GAGGAGGGGCCTCAAAGGCAAGGAGTGGGTGGCTTT...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCACCCTGCTGCTCCTCTCCCATTaGGTCAGCGGAAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: GSSGRRPSPEPESCCPTLLLLSH*VSGRVR
Trigger: CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAG...CAGGGTGGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCGGAGGCTGGCCCGGCTaGGTGCTGCAGCTCCCATCA +
Preference number: 5 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPGGWPG*VLQLPS
Trigger: TGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCC...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp AGCGAGGCGCTGCTCAGCCATGCCTCCTGCTGCTGCTGCCGCTGCTaGCTGGCTTTCTGCTTGGCCCTCCGCTCCAGGAATTGTTTGGCA +
Preference number: 5 (lower is better)
Translates to: SEALLSHASCCCCRC*LAFCLALRSRNCLA
Trigger: TGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGCATGGCTGAGCAGCGCCTCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp AGGTCCCCCAGAGCTGCCTTTTCTCGGAGCGCGCACTGTGGGAGCTaGCGGCTGCAAATGGGACAGTGGAGATGGTGGGCCACAGAGCCA +
Preference number: 5 (lower is better)
Translates to: RSPRAAFSRSAHCGS*RLQMGQWRWWATEP
Trigger: TGGCTCTGTGGCCCACCATCTCCACTGTCCCATTTGCAGCCGCCAGCTCCCACAGTGCGCGCTCCGAGAAAAGGCAGCTCTGGGGGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472105.1
CDS-3UTR CAA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGGTGCTCCATCCCGCCTaGCTGACTTCTCAAACCGCC +
Preference number: 5 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLVLHPA*LTSQTA
Trigger: GGCGGTTTGAGAAGTCAGCAAGGCGGGATGGAGCAC...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS TCA 90 bp TGGTGTCTCTGGGCATCAGCACCCTCGCCACCCTCTCTGGGAGGCTaGGACAGGAGGTGTAGTGAAGAACTCGGGGAGGGAGGCAGCCGA +
Preference number: 5 (lower is better)
Translates to: WCLWASAPSPPSLGG*DRRCSEELGEGGSR
Trigger: TCGGCTGCCTCCCTCCCCGAGTTCTTCACTACACCTCCTGTCTCAGCCTCCCAGAGAGGGTGGCGAGGGTGCTGATGCCCAGAGACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS TCA 90 bp GGCAGCCTGGCCCGGGAAGAAGGAGGGCAGGGGCTGGTGCTGGAGTaGACGAGGGTACCCAAGCCACTGGGAATTGGTCTGACCTCAGTA +
Preference number: 5 (lower is better)
Translates to: GSLAREEGGQGLVLE*TRVPKPLGIGLTSV
Trigger: TACTGAGGTCAGACCAATTCCCAGTGGCTTGGGTACCCTCGTTCACTCCAGCACCAGCCCCTGCCCTCCTTCTTCCCGGGCCAGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp TCGGAAGGTTCCTCCTCCTCCTCCAACCCTTGGAAGTCCAGCTCCTaGTCCTCAGGAATGGGCTCCTTGGGGCCCTTCTGCATGGGGCCG +
Preference number: 5 (lower is better)
Translates to: SEGSSSSSNPWKSSS*SSGMGSLGPFCMGP
Trigger: CGGCCCCATGCAGAAGGGCCCCAAGGAGCCCATTCCTGAGGAGCAGGAGCTGGACTTCCAAGGGTTGGAGGAGGAGGAGGAACCTTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464111.1
CDS CCA 90 bp TCGCCGGATGGTGTCTCTGGGCATCAGCACCCTCGCCACCCTCTCTaGGAGGCTGAGACAGGAGGTGTAGTGAAGAACTCGGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: SPDGVSGHQHPRHPL*EAETGGVVKNSGRE
Trigger: CTCCCTCCCCGAGTTCTTCACTACACCTCCTGTCTCAGCCTCCCAGAGAGGGTGGCGAGGGTGCTGATGCCCAGAGACACCATCCGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS CCA 90 bp CCATACCTGCTGACCAGCTGGAGAAACTGCTGGTGCTGCAGCTGCTaGTACAAGGCCGCCGCGGCCAGCTCCTGTTGCTTCTTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PYLLTSWRNCWCCSC*YKAAAASSCCFFSR
Trigger: GCGGCTGAAGAAGCAACAGGAGCTGGCCGCGGCGGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCTGGTCAGCAGGTATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472105.1
CDS CCA 90 bp GAGGGTACCCAAGCCACTGGGAATTGGTCTGACCTCAGTAGAGCCTaGGAGGGACCTTCACATCTGGGAAAGACCCGGGCTGCGGCGGCC +
Preference number: 5 (lower is better)
Translates to: EGTQATGNWSDLSRA*EGPSHLGKTRAAAA
Trigger: GGCCGCCGCAGCCCGGGTCTTTCCCAGATGTGAAGGTCCCTCCCAGGCTCTACTGAGGTCAGACCAATTCCCAGTGGCTTGGGTACCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643385.1
CDS CCA 90 bp GGAAGCAGCCTCTGGCACCATCAGGTGGAAATAAGGTCAGGGCAATaGAGGCTGATGGGGGCGCGGCGGCAGCCTGTTCCTCTAAGGGAG +
Preference number: 5 (lower is better)
Translates to: GSSLWHHQVEIRSGQ*RLMGARRQPVPLRE
Trigger: CTCCCTTAGAGGAACAGGCTGCCGCCGCGCCCCCATCAGCCTCCATTGCCCTGACCTTATTTCCACCTGATGGTGCCAGAGGCTGCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp TTCTCAAACCGCCTCTCGCCTCTGTCATCCCAGCTCTGGCTGCGCTaGATTTCCCGGGGGCTTCGTCCAAAGGCCCCATCGCCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: FSNRLSPLSSQLWLR*ISRGLRPKAPSPSS
Trigger: CGAAGAAGGCGATGGGGCCTTTGGACGAAGCCCCCGGGAAATCCAGCGCAGCCAGAGCTGGGATGACAGAGGCGAGAGGCGGTTTGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCAGCCAGCTTGTATTaGGGCATGGCAGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRSASLY*GMAGDG
Trigger: CCCGTCCCCTGCCATGCCCAAATACAAGCTGGCTGA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCCTTGGGGCCCTTCTaGAGAGGCAAGAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRSLGPF*RGKKAP
Trigger: TGGGGCCTTCTTGCCTCTCAAGAAGGGCCCCAAGGA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTCCTTGGGGCCCTTCTaGAGAGGCAAGAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSLGPF*RGKKAP
Trigger: TGGGGCCTTCTTGCCTCTCAAGAAGGGCCCCAAGGA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCTTCTCCTCTCGACGCTaGCGTTCCTCTTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPFSSRR*RSSSSR
Trigger: GCGGGAGGAAGAGGAACGCAAGCGTCGAGAGGAGAA...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGTCTTCCTCCGTCTTTTaGCGAATGGGCCGACCCGAT +
Preference number: 5 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLSSSVF*RMGRPD
Trigger: ATCGGGTCGGCCCATTCGCAAAAAGACGGAGGAAGA...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCTGGCTGGCTTTCTGCTaGGCCCTCCGCTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPWLAFC*ALRSRN
Trigger: ATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCA...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGCTGGCTTTCTGCTaGGCCCTCCGCTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRWLAFC*ALRSRN
Trigger: ATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTAGTTTGGTGCTGTGGTaGGCCTGGAAGGCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGSLVLW*AWKAVC
Trigger: GCAGACGGCCTTCCAGGCCAACCACAGCACCAAACT...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTAAAGCCACCCACTCCTaGCCTTTGAGGCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGKATHS*PLRPLL
Trigger: GAGGAGGGGCCTCAAAGGCAAGGAGTGGGTGGCTTT...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp TGCTGCTGCTGTAGCAACTTCAGCAATAGCTCCTGCTGCCGCACGTaGTTGCGCCGAAACAGCTCTTCCTCCTCCTGCCGCCGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: CCCCSNFSNSSCCRT*LRRNSSSSSCRRFC
Trigger: GCAGAAGCGGCGGCAGGAGGAGGAAGAGCTGTTTCGGCGCAAGCACGTGCGGCAGCAGGAGCTATTGCTGAAGTTGCTACAGCAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp AGGCGCTGCTCAGCCATGCCTCCTGCTGCTGCTGCCGCTGCTGGCTaGCTTTCTGCTTGGCCCTCCGCTCCAGGAATTGTTTGGCAAATT +
Preference number: 5 (lower is better)
Translates to: RRCSAMPPAAAAAAG*LSAWPSAPGIVWQI
Trigger: AATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGCATGGCTGAGCAGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGGGATTCCACCTCCTaGAGGATCGCTACAGCCATG +
Preference number: 5 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGDSTS*RIATAM
Trigger: CATGGCTGTAGCGATCCTCAAGGAGGTGGAATCCCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 90 bp TCGGAAGGTTCCTCCTCCTCCTCCAACCCTTGGAAGTCCAGCTCCTaGTCCTCAGGAATGGGCTCCTTGGGGCCCTTCTTGAGAGGCAAG +
Preference number: 5 (lower is better)
Translates to: SEGSSSSSNPWKSSS*SSGMGSLGPFLRGK
Trigger: CTTGCCTCTCAAGAAGGGCCCCAAGGAGCCCATTCCTGAGGAGCAGGAGCTGGACTTCCAAGGGTTGGAGGAGGAGGAGGAACCTTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp GGGGCTGGTGCTGGAGTGAACGAGGGTACCCAAGCCACTGGGAATTaGTCTGACCTCAGTAGAGCCTGGGAGGGACCTTCACATCTGGGA +
Preference number: 5 (lower is better)
Translates to: GAGAGVNEGTQATGN*SDLSRAWEGPSHLG
Trigger: TCCCAGATGTGAAGGTCCCTCCCAGGCTCTACTGAGGTCAGACCAATTCCCAGTGGCTTGGGTACCCTCGTTCACTCCAGCACCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000643385.1
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CCCGGGCGGCAGCCCCTCTACTGCAACCCTAAGCCCAAAGCCACCCACTCCTTGCCTCCGCTCCAGGAATaGTTTGGCAAATTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: PGRQPLYCNPKPKATHSLPPLQE*FGKFFG
Trigger: GCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGG...CAAGGAGTGGGTGGCTTTGGGCTTAGGGTTGCAGTAGAGGGGCTGCCGCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTCCCCGGGGCCGAGTTaGGTGCTGTGGTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QPYPTVKSASYQTRKATCSPGPS*VLWLAW
Trigger: CCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS TCA 90 bp AGGAACGGATATAATCGTGGACATCATAGGGGGATTCCACCTCCTTaGGGATCGCTACAGCCATGGGCACGTCCAGGCTGCCCGTGGCGC +
Preference number: 5 (lower is better)
Translates to: RNGYNRGHHRGIPPP*GSLQPWARPGCPWR
Trigger: GCGCCACGGGCAGCCTGGACGTGCCCATGGCTGTAGCGATCCTCAAGGAGGTGGAATCCCCCTATGATGTCCACGATTATATCCGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS TCA 90 bp ACCCCGGAAGGGCAGGTTCCCACCCTCGCCTCCTCACAGATACCTTaGGAGGCAAGAAGGCCCCAGAGGCATCAAAGGTGCCCATTTCTT +
Preference number: 5 (lower is better)
Translates to: TPEGQVPTLASSQIP*EARRPQRHQRCPFL
Trigger: AAGAAATGGGCACCTTTGATGCCTCTGGGGCCTTCTTGCCTCTCAAGGTATCTGTGAGGAGGCGAGGGTGGGAACCTGCCCTTCCGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464111.1
CDS GCA 90 bp CTCAGCCATGCCTCCTGCTGCTGCTGCCGCTGCTGGCTGGCTTTCTaGTTGGCCCTCCGCTCCAGGAATTGTTTGGCAAATTCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LSHASCCCCRCWLAF*LALRSRNCLANSLA
Trigger: AGCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGCATGGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp GCCATGCCTCCTGCTGCTGCTGCCGCTGCTGGCTGGCTTTCTGCTTaGCCCTCCGCTCCAGGAATTGTTTGGCAAATTCTTTGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: AMPPAAAAAAGWLSA*PSAPGIVWQILWLP
Trigger: TGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGCATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp GAGGGTACCCAAGCCACTGGGAATTGGTCTGACCTCAGTAGAGCCTaGGAGGGACCTTCACATCTGGGAAAGACCCAGCTGGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: EGTQATGNWSDLSRA*EGPSHLGKTQLGSS
Trigger: GCTGCTTCCCAGCTGGGTCTTTCCCAGATGTGAAGGTCCCTCCCAGGCTCTACTGAGGTCAGACCAATTCCCAGTGGCTTGGGTACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646601.1
CDS-3UTR CAA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACGAGGTGGGGGCTGTTaGTGCAGCTGCCGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIRGGGC*CSCRSP
Trigger: GGGCGAGCGGCAGCTGCACAAACAGCCCCCACCTCG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTGTTTGGCAAATTCTTaGGCTTCCAGCGTGTCCCCC +
Preference number: 5 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGCLANS*ASSVSP
Trigger: GGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS TCA 90 bp GCTCAGAAGCTCAAATCCAGGGGCTTGGTCTGGGGAGAAACCCAGTaGAAAGGAGCAGGAGGTGACTCTAGGGCCACAGACGGGTACACG +
Preference number: 5 (lower is better)
Translates to: AQKLKSRGLVWGETQ*KGAGGDSRATDGYT
Trigger: CGTGTACCCGTCTGTGGCCCTAGAGTCACCTCCTGCTCCTTTTCACTGGGTTTCTCCCCAGACCAAGCCCCTGGATTTGAGCTTCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CAA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGTGTCGTGAAGGGGCCTaGGATCTCGCCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLCREGA*DLALWV
Trigger: GACCCACAGGGCGAGATCCAAGGCCCCTTCACGACA...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAACGCGGCCCCACATCTaGATCACCTCGCCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIITRPHI*ITSPSG
Trigger: GCCGCTGGGCGAGGTGATCAAGATGTGGGGCCGCGT...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCGAGGTGGGGGCTGTTaGTGCAGCTGCCGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQRGGGC*CSCRSP
Trigger: GGGCGAGCGGCAGCTGCACAAACAGCCCCCACCTCG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAGGCTCCCGCCGCTCTaGGGGGTGTCCTCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQRLPPL*GVSSQS
Trigger: GCTCTGGGAGGACACCCCCAAGAGCGGCGGGAGCCT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCCCCGGGGCCGAGTTaGGTGCTGTGGTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISPGPS*VLWLAW
Trigger: CCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCTGTGGACCTTCCATaGTCACACCCACTATCCTCA +
Preference number: 5 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRSVDLP*SHPLSS
Trigger: TGAGGATAGTGGGTGTGACAATGGAAGGTCCACAGA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAGGAGGCTGGCCCGGCTaGGTGCTGCAGCTCCCATCA +
Preference number: 5 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIGGWPG*VLQLPS
Trigger: TGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCC...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp GAGGGTACCCAAGCCACTGGGAATTGGTCTGACCTCAGTAGAGCCTaGGAGGGACCTTCACATCTGGGAAAGACCCTTAAGGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: EGTQATGNWSDLSRA*EGPSHLGKTLKESR
Trigger: CCTGCTCTCCTTAAGGGTCTTTCCCAGATGTGAAGGTCCCTCCCAGGCTCTACTGAGGTCAGACCAATTCCCAGTGGCTTGGGTACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CAA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGTGCTCCATCCCGCCTaGCTGACTTCTCAAACCGCC +
Preference number: 5 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLVLHPA*LTSQTA
Trigger: GGCGGTTTGAGAAGTCAGCAAGGCGGGATGGAGCAC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTAAATCAAATTCAAACTaGCGCCGCCGTTCCCCATGT +
Preference number: 5 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGKSNSN*RRRSPC
Trigger: ACATGGGGAACGGCGGCGCAAGTTTGAATTTGATTT...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTCCTTGGGGCCCTTCTaGAGAGGCAAGAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: QPYPTVKSASYQTRKATCSLGPF*RGKKAP
Trigger: TGGGGCCTTCTTGCCTCTCAAGAAGGGCCCCAAGGA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACGCGGCCCCACATCTaGATCACCTCGCCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQTRPHI*ITSPSG
Trigger: GCCGCTGGGCGAGGTGATCAAGATGTGGGGCCGCGT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTGGAGTTGTTCTAGAATaGGACCCTGAGTCGAAGAGT +
Preference number: 5 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGGVVLE*DPESKS
Trigger: ACTCTTCGACTCAGGGTCCAATTCTAGAACAACTCC...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGCGCTCCAGGAATTGTTaGGCAAATTCTTTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRRSRNC*ANSLAS
Trigger: GGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCG...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTCGCTCCAGGAATTGTTaGGCAAATTCTTTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGRSRNC*ANSLAS
Trigger: GGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCG...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGAAAGCCACCCACTCCTaGCCTTTGAGGCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLKATHS*PLRPLL
Trigger: GAGGAGGGGCCTCAAAGGCAAGGAGTGGGTGGCTTT...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCTGCTCCTCTCCCATTaGGTCAGCGGAAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLLLLSH*VSGRVR
Trigger: CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACCAGGTGCTGCGGTGTaGTCACTGGCTGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIPGAAV*SLAGRE
Trigger: CTCCCTCCCAGCCAGTGACAACACCGCAGCACCTGG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS CCA 90 bp ACCAAGGGAACGAGGATCTCAGGATACCAGCTGGGAAGCAGCCTCTaGCACCATCAGGTGGAAATAAGGTCAGGGCAATGGAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: TKGTRISGYQLGSSL*HHQVEIRSGQWRLM
Trigger: CATCAGCCTCCATTGCCCTGACCTTATTTCCACCTGATGGTGCCAGAGGCTGCTTCCCAGCTGGTATCCTGAGATCCTCGTTCCCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CAA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCTCAAATCCAGGGGCTaGGTCTGGGGAGAAACCCAG +
Preference number: 5 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLLKSRG*VWGETQ
Trigger: CTGGGTTTCTCCCCAGACCAAGCCCCTGGATTTGAG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CAA 90 bp CAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTTCTTCGATGCTTCTTaGGTAAAAGCAGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: QTRKATCSSPIWSAEGSGFFDAS*VKAAVT
Trigger: GGTGACAGCTGCTTTTACCAAAGAAGCATCGAAGAA...ACCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp TCAGACCCGGAAGGCCACCTGCTCCTCTCCCATTTGGTCAGCGGAAGGGTCAGGTTCTTCGATGCTTCTTaGGTAAAAGCAGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: SDPEGHLLLSHLVSGRVRFFDAS*VKAAVT
Trigger: GGTGACAGCTGCTTTTACCAAAGAAGCATCGAAGAA...CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAGGTGGCCTTCCGGGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAAAATGGCAGCAGTGGGAGACGCCCCTCACCAGAACCAGAGTCCTGCTGCCCCTTCTTCGATGCTTCTTaGGTAAAAGCAGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: QNGSSGRRPSPEPESCCPFFDAS*VKAAVT
Trigger: GGTGACAGCTGCTTTTACCAAAGAAGCATCGAAGAA...GGGGCAGCAGGACTCTGGTTCTGGTGAGGGGCGTCTCCCACTGCTGCCATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCACTCAGGCCCAAAGTaGAGTGTCTCTGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLHSGPK*SVSAAI
Trigger: GATGGCAGCAGAGACACTCAACTTTGGGCCTGAGTG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATGGCTGGCTTTCTGCTaGGCCCTCCGCTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIWLAFC*ALRSRN
Trigger: ATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGGGCCACTCGTCCAATTaGTGCAACTGTCCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLGHSSN*CNCPPK
Trigger: CTTTGGGGGACAGTTGCACAAATTGGACGAGTGGCC...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATACTGCTCCTCTCCCATTaGGTCAGCGGAAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIILLLSH*VSGRVR
Trigger: CCTGACCCTTCCGCTGACCAAATGGGAGAGGAGCAG...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTTCTCCTCTCGACGCTaGCGTTCCTCTTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQFSSRR*RSSSSR
Trigger: GCGGGAGGAAGAGGAACGCAAGCGTCGAGAGGAGAA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCTGTTTGGCAAATTCTTaGGCTTCCAGCGTGTCCCCC +
Preference number: 5 (lower is better)
Translates to: QPYPTVKSASYQTRKATCCLANS*ASSVSP
Trigger: GGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACA...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAGTTTGGTGCTGTGGTaGGCCTGGAAGGCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQSLVLW*AWKAVC
Trigger: GCAGACGGCCTTCCAGGCCAACCACAGCACCAAACT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCTCAAATCCAGGGGCTaGGTCTGGGGAGAAACCCAG +
Preference number: 5 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQLKSRG*VWGETQ
Trigger: CTGGGTTTCTCCCCAGACCAAGCCCCTGGATTTGAG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS-3UTR CAA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCTTCCTCCGTCTTTTaGCGAATGGGCCGACCCGAT +
Preference number: 5 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIISSSVF*RMGRPD
Trigger: ATCGGGTCGGCCCATTCGCAAAAAGACGGAGGAAGA...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGGGGATTCCACCTCCTaGAGGATCGCTACAGCCATG +
Preference number: 5 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQGDSTS*RIATAM
Trigger: CATGGCTGTAGCGATCCTCAAGGAGGTGGAATCCCC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CCCCAGTCTGTAAAGTGCCTCGTGGTGGGTGAGTTAAGGTGCATCGTGTGTTTGCCTCCGCTCCAGGAATaGTTTGGCAAATTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: PQSVKCLVVGELRCIVCLPPLQE*FGKFFG
Trigger: GCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGG...CAAACACACGATGCACCTTAACTCACCCACCACGAGGCACTTTACAGACTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGCACTCAGGCCCAAAGTaGAGTGTCTCTGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQHSGPK*SVSAAI
Trigger: GATGGCAGCAGAGACACTCAACTTTGGGCCTGAGTG...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp CAACCTTACCCAACGGTAAAAAGCGCATCATATCAGACCCGGAAGGCCACCTGCGGAGTTGTTCTAGAATaGGACCCTGAGTCGAAGAGT +
Preference number: 5 (lower is better)
Translates to: QPYPTVKSASYQTRKATCGVVLE*DPESKS
Trigger: ACTCTTCGACTCAGGGTCCAATTCTAGAACAACTCC...GCAGGTGGCCTTCCGGGTCTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTCTTCCTCCGTCTTTTaGCGAATGGGCCGACCCGAT +
Preference number: 5 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQSSSVF*RMGRPD
Trigger: ATCGGGTCGGCCCATTCGCAAAAAGACGGAGGAAGA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGTGTTTGGCAAATTCTTaGGCTTCCAGCGTGTCCCCC +
Preference number: 5 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQCLANS*ASSVSP
Trigger: GGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACA...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp AGCCGCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATAAAATCAAATTCAAACTaGCGCCGCCGTTCCCCATGT +
Preference number: 5 (lower is better)
Translates to: SRTLLFTPTLPNGKKRIIKSNSN*RRRSPC
Trigger: ACATGGGGAACGGCGGCGCAAGTTTGAATTTGATTT...TATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGCGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGAAATCAAATTCAAACTaGCGCCGCCGTTCCCCATGT +
Preference number: 5 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQKSNSN*RRRSPC
Trigger: ACATGGGGAACGGCGGCGCAAGTTTGAATTTGATTT...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS-3UTR CAA 90 bp GCACACTTCTCTTCACCCCAACCTTACCCAACGGTAAAAAGCGCATCATATCAGGGAGTTGTTCTAGAATaGGACCCTGAGTCGAAGAGT +
Preference number: 5 (lower is better)
Translates to: AHFSSPQPYPTVKSASYQGVVLE*DPESKS
Trigger: ACTCTTCGACTCAGGGTCCAATTCTAGAACAACTCC...CTGATATGATGCGCTTTTTACCGTTGGGTAAGGTTGGGGTGAAGAGAAGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS TCA 90 bp TCCTGGAATTTATGTTGCAGCTGGAGTTGTTCTAGAATTGGACCCTaGGTCGAAGAGTTAATTGGTATGTCCCAAAGACTGGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: SWNLCCSWSCSRIGP*VEELIGMSQRLASP
Trigger: TGGTGAGGCCAGTCTTTGGGACATACCAATTAACTCTTCGACTCAGGGTCCAATTCTAGAACAACTCCAGCTGCAACATAAATTCCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp GAGACGGGGGAGGGTCCTCGCTGGCGGCCCGCGCGCTaGCTCCGGCGCTTCTCTAGCTCGCGGGCTCGGCGC +
Preference number: 6 (lower is better)
Translates to: ETGEGPRWRPAR*LRRFSSSRARR
Trigger: GCGCCGAGCCCGCGAGCTAGAGAAGCGCCGGAGCCAGCGCGCGGGCCGCCAGCGAGGACCCTCCCCCGTCTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643385.1
CDS CCA 72 bp GGCGGCCTCGGGGAGGAGACGGGGGAGGGTCCTCGCTaGCGGCCCGCGCGCTGGCTCCGGCGCTTCTCTAGC +
Preference number: 6 (lower is better)
Translates to: GGLGEETGEGPR*RPARWLRRFSS
Trigger: GCTAGAGAAGCGCCGGAGCCAGCGCGCGGGCCGCCAGCGAGGACCCTCCCCCGTCTCCTCCCCGAGGCCGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643385.1
CDS GCA 72 bp GGCAGCCCCATGGCTGAGCGGGAGGGCAGTGGCGGCTaGAGAGTGGCGCAGGCCCTGGGTCTGCATGGCAGC +
Preference number: 6 (lower is better)
Translates to: GSPMAEREGSGG*RVAQALGLHGS
Trigger: GCTGCCATGCAGACCCAGGGCCTGCGCCACTCTGCAGCCGCCACTGCCCTCCCGCTCAGCCATGGGGCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 72 bp TGGGCCCGAGCTGGCTCCCGAGGTGGGGGCTGTTTGTaGAGCTGCCGCTCGCCCTCCAGCTGCAACTCCAGG +
Preference number: 6 (lower is better)
Translates to: WARAGSRGGGCL*SCRSPSSCNSR
Trigger: CCTGGAGTTGCAGCTGGAGGGCGAGCGGCAGCTGCACAAACAGCCCCCACCTCGGGAGCCAGCTCGGGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 72 bp GCAGAGGACTCAAGCGGGTGGGCGGGGTCCAGGTGCTaGGGTGTTGTCACTGGCTGGGAGGGAGGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: AEDSSGWAGSRC*GVVTGWEGGWP
Trigger: GGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAGCACCTGGACCCCGCCCACCCGCTTGAGTCCTCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp CCATGGCTGAGCGGGAGGGCAGTGGCGGCTGCAGAGTaGCGCAGGCCCTGGGTCTGCATGGCAGCCGTGAAC +
Preference number: 6 (lower is better)
Translates to: PWLSGRAVAAAE*RRPWVCMAAVN
Trigger: GTTCACGGCTGCCATGCAGACCCAGGGCCTGCGCCACTCTGCAGCCGCCACTGCCCTCCCGCTCAGCCATGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp AAGCTGCACTCGGTGGTTGGGGGCCTGGGCCCGAGCTaGCTCCCGAGGTGGGGGCTGTTTGTGCAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: KLHSVVGGLGPS*LPRWGLFVQLP
Trigger: CGGCAGCTGCACAAACAGCCCCCACCTCGGGAGCCAGCTCGGGCCCAGGCCCCCAACCACCGAGTGCAGCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp GCCTTGCTGCCCTCCCCGGGGCCGAGTTTGGTGCTGTaGTTGGCCTGGAAGGCCGTCTGCAGCGAGGCGCTG +
Preference number: 6 (lower is better)
Translates to: ALLPSPGPSLVL*LAWKAVCSEAL
Trigger: CAGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CAA 90 bp AGGCAGAGGACTCAAGCGGGTGGGCGGGGTCCAGGTGCTGCGGTGTaGTCACTGGCTGGGAGGGAGGCTGGCCCGGCTTGGTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RQRTQAGGRGPGAAV*SLAGREAGPAWCCS
Trigger: GCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAGCACCTGGACCCCGCCCACCCGCTTGAGTCCTCTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS CAA 90 bp CTCTTGGCCTTGCTGCCCTCCCCGGGGCCGAGTTTGGTGCTGTGGTaGGCCTGGAAGGCCGTCTGCAGCGAGGCGCTGCTCAGCCATGCC +
Preference number: 6 (lower is better)
Translates to: LLALLPSPGPSLVLW*AWKAVCSEALLSHA
Trigger: GGCATGGCTGAGCAGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGGCCAAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CAA 90 bp ATCAGTGCCCGCCTCTTGGCCTTGCTGCCCTCCCCGGGGCCGAGTTaGGTGCTGTGGTTGGCCTGGAAGGCCGTCTGCAGCGAGGCGCTG +
Preference number: 6 (lower is better)
Translates to: ISARLLALLPSPGPS*VLWLAWKAVCSEAL
Trigger: CAGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGGCCAAGAGGCGGGCACTGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS TCA 72 bp AGGGCCCTGGGGCAAAGGGCACGCGGCCCCACATCTTaGTCACCTCGCCCAGCGGCTGGAAGCCCTCATCGC +
Preference number: 6 (lower is better)
Translates to: RALGQRARGPTS*SPRPAAGSPHR
Trigger: GCGATGAGGGCTTCCAGCCGCTGGGCGAGGTGATCAAGATGTGGGGCCGCGTGCCCTTTGCCCCAGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000472105.1
ENST00000646601.1
ENST00000678049.1
CDS GCA 72 bp CGAGCTGGCTCCCGAGGTGGGGGCTGTTTGTGCAGCTaGCGCTCGCCCTCCAGCTGCAACTCCAGGAGCGTC +
Preference number: 6 (lower is better)
Translates to: RAGSRGGGCLCS*RSPSSCNSRSV
Trigger: GACGCTCCTGGAGTTGCAGCTGGAGGGCGAGCGGCAGCTGCACAAACAGCCCCCACCTCGGGAGCCAGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp GGGGGCGCGGCGGCAGCCTGTTCCTCTAAGGGAGGATaGAGGGGACTTTCAGGAGGAGGCGCATCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: GGAAAACSSKGG*RGLSGGGASLG
Trigger: CCCCAGGGATGCGCCTCCTCCTGAAAGTCCCCTCCATCCTCCCTTAGAGGAACAGGCTGCCGCCGCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp GGGAGCTGGCGGCTGCTGACCAGCTGGAGAAACTGCTaGTGCTGCAGCTGCTGGTACAAGGCCGCCGCGGCC +
Preference number: 6 (lower is better)
Translates to: GSWRLLTSWRNC*CCSCWYKAAAA
Trigger: GGCCGCGGCGGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCTGGTCAGCAGCCGCCAGCTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp TGCTGCCCTCCCCGGGGCCGAGTTTGGTGCTGTGGTTaGCCTGGAAGGCCGTCTGCAGCGAGGCGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: CCPPRGRVWCCG*PGRPSAARRCS
Trigger: TGAGCAGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp GCCTCTTGGCCTTGCTGCCCTCCCCGGGGCCGAGTTTaGTGCTGTGGTTGGCCTGGAAGGCCGTCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: ASWPCCPPRGRV*CCGWPGRPSAA
Trigger: CGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGGCCAAGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp GGGAGCTGGCGGCTGCAAATGGGACAGTGGAGATGGTaGGCCACAGAGCCAGCGCCGGGCCTTCTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: GSWRLQMGQWRW*ATEPAPGLLPA
Trigger: GGCTGGGAGAAGGCCCGGCGCTGGCTCTGTGGCCCACCATCTCCACTGTCCCATTTGCAGCCGCCAGCTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472105.1
CDS CAA 72 bp GAGGGCCCTGGGGCAAAGGGCACGCGGCCCCACATCTaGATCACCTCGCCCAGCGGCTGGAAGCCCTCATCG +
Preference number: 6 (lower is better)
Translates to: EGPGAKGTRPHI*ITSPSGWKPSS
Trigger: CGATGAGGGCTTCCAGCCGCTGGGCGAGGTGATCAAGATGTGGGGCCGCGTGCCCTTTGCCCCAGGGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000472105.1
ENST00000646601.1
ENST00000678049.1
CDS CAA 72 bp TTGCTGCCCTCCCCGGGGCCGAGTTTGGTGCTGTGGTaGGCCTGGAAGGCCGTCTGCAGCGAGGCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LLPSPGPSLVLW*AWKAVCSEALL
Trigger: GAGCAGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CAA 72 bp CGCCTCTTGGCCTTGCTGCCCTCCCCGGGGCCGAGTTaGGTGCTGTGGTTGGCCTGGAAGGCCGTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RLLALLPSPGPS*VLWLAWKAVCS
Trigger: GCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGGCCAAGAGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CAA 90 bp AGGTGCTGCGGTGTTGTCACTGGCTGGGAGGGAGGCTGGCCCGGCTaGGTGCTGCAGCTCCCATCAACTCCAGGACGCCACAGTCGCGGG +
Preference number: 6 (lower is better)
Translates to: RCCGVVTGWEGGWPG*VLQLPSTPGRHSRG
Trigger: CCCGCGACTGTGGCGTCCTGGAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAGCACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678049.1
CDS GCA 72 bp GAGGGAGGGTTCAGGACATGGCTCTGCCGGCAGCCCTaGCCTGCCCCGCATGACAGGAGAGGTCCATTCGCC +
Preference number: 6 (lower is better)
Translates to: EGGFRTWLCRQP*PAPHDRRGPFA
Trigger: GGCGAATGGACCTCTCCTGTCATGCGGGGCAGGGCAGGGCTGCCGGCAGAGCCATGTCCTGAACCCTCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS GCA 72 bp AGCGGCTCCAGAGCCAGGGGCTGCAGTGGCTCGTCCTaGAGCACCGCGGCGAACTCCTTGTCCTGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SGSRARGCSGSS*STAANSLSCSS
Trigger: AGAGCTGCAGGACAAGGAGTTCGCCGCGGTGCTGCAGGACGAGCCACTGCAGCCCCTGGCTCTGGAGCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000471340.2
ENST00000646601.1
ENST00000678049.1
CDS GCA 72 bp TGGCGGCTGCTGACCAGCTGGAGAAACTGCTGGTGCTaGAGCTGCTGGTACAAGGCCGCCGCGGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: WRLLTSWRNCWC*SCWYKAAAASS
Trigger: GGAGCTGGCCGCGGCGGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCTGGTCAGCAGCCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 72 bp AGCTGGCGGCTGCTGACCAGCTGGAGAAACTGCTGGTaGTGCAGCTGCTGGTACAAGGCCGCCGCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: SWRLLTSWRNCW*CSCWYKAAAAS
Trigger: GCTGGCCGCGGCGGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCTGGTCAGCAGCCGCCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 72 bp ATGGGCACGTCCAGGCTGCCCGTGGCGCTCAGCGTGTaGAGCATCTGCTCGCACCACTGGGTGAAGCCGTCC +
Preference number: 6 (lower is better)
Translates to: MGTSRLPVALSV*SICSHHWVKPS
Trigger: GGACGGCTTCACCCAGTGGTGCGAGCAGATGCTGCACACGCTGAGCGCCACGGGCAGCCTGGACGTGCCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 72 bp CTGGAAGGCCGTCTGCAGCGAGGCGCTGCTCAGCCATaGCTCCTGCTGCTGCTGCCGCTGCTGGCTGGCTTT +
Preference number: 6 (lower is better)
Translates to: LEGRLQRGAAQP*LLLLLPLLAGF
Trigger: AAAGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGCATGGCTGAGCAGCGCCTCGCTGCAGACGGCCTTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 72 bp TCTTGGCCTTGCTGCCCTCCCCGGGGCCGAGTTTGGTaGTGTGGTTGGCCTGGAAGGCCGTCTGCAGCGAGG +
Preference number: 6 (lower is better)
Translates to: SWPCCPPRGRVW*CGWPGRPSAAR
Trigger: CCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGGCCAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp CTCCTCAGTCAGCGGCTCCAGAGCCAGGGGCTGCAGTaGCTCGTCCTGCAGCACCGCGGCGAACTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: LLSQRLQSQGLQ*LVLQHRGELLV
Trigger: GACAAGGAGTTCGCCGCGGTGCTGCAGGACGAGCCACTGCAGCCCCTGGCTCTGGAGCCGCTGACTGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000471340.2
ENST00000646601.1
ENST00000678049.1
CDS CAA 72 bp GGGTCTGAGTGCAGCATCAGTGCCCGCCTCTTGGCCTaGCTGCCCTCCCCGGGGCCGAGTTTGGTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: GSECSISARLLA*LPSPGPSLVLW
Trigger: CCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGGCCAAGAGGCGGGCACTGATGCTGCACTCAGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CAA 90 bp AGGTGCTGCGGTGTTGTCACTGGCTGGGAGGGAGGCTGGCCCGGCTaGGTGCTGCAGCTCCCATCAACTCCAGGACGCCACAGTCGGGCT +
Preference number: 6 (lower is better)
Translates to: RCCGVVTGWEGGWPG*VLQLPSTPGRHSRA
Trigger: AGCCCGACTGTGGCGTCCTGGAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAGCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646601.1
CDS GCA 72 bp TGTGGGAGCTGGCGGCTGCTGACCAGCTGGAGAAACTaGTGGTGCTGCAGCTGCTGGTACAAGGCCGCCGCG +
Preference number: 6 (lower is better)
Translates to: CGSWRLLTSWRN*WCCSCWYKAAA
Trigger: CGCGGCGGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCTGGTCAGCAGCCGCCAGCTCCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 72 bp CCCCCATACCTGCTGACCAGCTGGAGAAACTGCTGGTaGTGCAGCTGCTGGTACAAGGCCGCCGCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: PPYLLTSWRNCW*CSCWYKAAAAS
Trigger: GCTGGCCGCGGCGGCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCTGGTCAGCAGGTATGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472105.1
CDS CCA 72 bp CGCCTCTCGCCTCTGTCATCCCAGCTCTGGCTGCGCTaGATTTCCCGGGGGCTTCGTCCAAAGGCCCCATCG +
Preference number: 6 (lower is better)
Translates to: RLSPLSSQLWLR*ISRGLRPKAPS
Trigger: CGATGGGGCCTTTGGACGAAGCCCCCGGGAAATCCAGCGCAGCCAGAGCTGGGATGACAGAGGCGAGAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CAA 72 bp GGTGTTGTCACTGGCTGGGAGGGAGGCTGGCCCGGCTaGGTGCTGCAGCTCCCATCAACTCCAGGACGCCAC +
Preference number: 6 (lower is better)
Translates to: GVVTGWEGGWPG*VLQLPSTPGRH
Trigger: GTGGCGTCCTGGAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS CAA 90 bp CTGGTGCTGCAGCTGCTGGTACAAGGCCGCCGCGGCCAGCTCCTGTaGCTTCTTCAGCCGCTCCTGGTCCATGTTTCCCAGCAGTGGGGG +
Preference number: 6 (lower is better)
Translates to: LVLQLLVQGRRGQLL*LLQPLLVHVSQQWG
Trigger: CCCCCACTGCTGGGAAACATGGACCAGGAGCGGCTGAAGAAGCAACAGGAGCTGGCCGCGGCGGCCTTGTACCAGCAGCTGCAGCACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000472105.1
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp CCTGCCCCGCATGACAGGAGAGGTCCATTCGCCGGATaGTGTCTCTGGGCATCAGCACCCTCGCCACCCTCT +
Preference number: 6 (lower is better)
Translates to: PAPHDRRGPFAG*CLWASAPSPPS
Trigger: AGAGGGTGGCGAGGGTGCTGATGCCCAGAGACACCATCCGGCGAATGGACCTCTCCTGTCATGCGGGGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS CCA 72 bp GTGTTGTCACTGGCTGGGAGGGAGGCTGGCCCGGCTTaGTGCTGCAGCTCCCATCAACTCCAGGACGCCACA +
Preference number: 6 (lower is better)
Translates to: VLSLAGREAGPA*CCSSHQLQDAT
Trigger: TGTGGCGTCCTGGAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp AGGTGCTGCGGTGTTGTCACTGGCTGGGAGGGAGGCTaGCCCGGCTTGGTGCTGCAGCTCCCATCAACTCCA +
Preference number: 6 (lower is better)
Translates to: RCCGVVTGWEGG*PGLVLQLPSTP
Trigger: TGGAGTTGATGGGAGCTGCAGCACCAAGCCGGGCCAGCCTCCCTCCCAGCCAGTGACAACACCGCAGCACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646601.1
ENST00000678049.1
CDS GCA 72 bp AGCTGCTGGTACAAGGCCGCCGCGGCCAGCTCCTGTTaGTTCTTCAGCCGCTCCTGGTCCATGTTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: SCWYKAAAASSC*FFSRSWSMFPS
Trigger: GCTGGGAAACATGGACCAGGAGCGGCTGAAGAAGCAACAGGAGCTGGCCGCGGCGGCCTTGTACCAGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000472105.1
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp CATGACAGGAGAGGTCCATTCGCCGGATGGTGTCTCTaGGCATCAGCACCCTCGCCACCCTCTCTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: HDRRGPFAGWCL*ASAPSPPSLGG
Trigger: GCCTCCCAGAGAGGGTGGCGAGGGTGCTGATGCCCAGAGACACCATCCGGCGAATGGACCTCTCCTGTCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS CCA 72 bp AGAGCTGCCTTTTCTCGGAGCGCGCACTGTGGGAGCTaGCGGCTGCAAATGGGACAGTGGAGATGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: RAAFSRSAHCGS*RLQMGQWRWWA
Trigger: GGCCCACCATCTCCACTGTCCCATTTGCAGCCGCCAGCTCCCACAGTGCGCGCTCCGAGAAAAGGCAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472105.1
CDS CCA 72 bp GTCCCCCAGAGCTGCCTTTTCTCGGAGCGCGCACTGTaGGAGCTGGCGGCTGCAAATGGGACAGTGGAGATG +
Preference number: 6 (lower is better)
Translates to: VPQSCLFSERAL*ELAAANGTVEM
Trigger: CATCTCCACTGTCCCATTTGCAGCCGCCAGCTCCCACAGTGCGCGCTCCGAGAAAAGGCAGCTCTGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472105.1
CDS CAA 72 bp CAGCTGCTGGTACAAGGCCGCCGCGGCCAGCTCCTGTaGCTTCTTCAGCCGCTCCTGGTCCATGTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: QLLVQGRRGQLL*LLQPLLVHVSQ
Trigger: CTGGGAAACATGGACCAGGAGCGGCTGAAGAAGCAACAGGAGCTGGCCGCGGCGGCCTTGTACCAGCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000472105.1
ENST00000646601.1
ENST00000678049.1
CDS TCA 72 bp TGGGCATCAGCACCCTCGCCACCCTCTCTGGGAGGCTaGGACAGGAGGTGTAGTGAAGAACTCGGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: WASAPSPPSLGG*DRRCSEELGEG
Trigger: TCCCTCCCCGAGTTCTTCACTACACCTCCTGTCTCAGCCTCCCAGAGAGGGTGGCGAGGGTGCTGATGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS GCA 72 bp GCAACTTCAGCAATAGCTCCTGCTGCCGCACGTGCTTaGGCCGAAACAGCTCTTCCTCCTCCTGCCGCCGCT +
Preference number: 6 (lower is better)
Translates to: ATSAIAPAAARA*AETALPPPAAA
Trigger: AGCGGCGGCAGGAGGAGGAAGAGCTGTTTCGGCGCAAGCACGTGCGGCAGCAGGAGCTATTGCTGAAGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp GTCCAGACGGTGAAAGACCTGGGGGAGGCGAGGAGATaGGAAGCTCGAGTCCTTTCGGCCTCAGCAGGGCAA +
Preference number: 6 (lower is better)
Translates to: VQTVKDLGEARR*EARVLSASAGQ
Trigger: TTGCCCTGCTGAGGCCGAAAGGACTCGAGCTTCCCATCTCCTCGCCTCCCCCAGGTCTTTCACCGTCTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275732.5
CDS CAA 72 bp TGCAGTGGCTCGTCCTGCAGCACCGCGGCGAACTCCTaGTCCTGCAGCTCTTCCGGGACCTTGTTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: CSGSSCSTAANS*SCSSSGTLFSL
Trigger: CAAGGAGAACAAGGTCCCGGAAGAGCTGCAGGACAAGGAGTTCGCCGCGGTGCTGCAGGACGAGCCACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000471340.2
ENST00000646601.1
ENST00000678049.1
CDS CAA 72 bp AGCAACTTCAGCAATAGCTCCTGCTGCCGCACGTGCTaGCGCCGAAACAGCTCTTCCTCCTCCTGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: SNFSNSSCCRTC*RRNSSSSSCRR
Trigger: GCGGCGGCAGGAGGAGGAAGAGCTGTTTCGGCGCAAGCACGTGCGGCAGCAGGAGCTATTGCTGAAGTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS TCA 72 bp CTGGAAGCCCTCATCGCAGCCCCGCTTCACCAGCAGTaGCATGGAAAAGTAGCCGGCCTGGAACCACTCTGC +
Preference number: 6 (lower is better)
Translates to: LEALIAAPLHQQ*HGKVAGLEPLC
Trigger: GCAGAGTGGTTCCAGGCCGGCTACTTTTCCATGTCACTGCTGGTGAAGCGGGGCTGCGATGAGGGCTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 72 bp GCCTCCTGCTGCTGCTGCCGCTGCTGGCTGGCTTTCTaGTTGGCCCTCCGCTCCAGGAATTGTTTGGCAAAT +
Preference number: 6 (lower is better)
Translates to: ASCCCCRCWLAF*LALRSRNCLAN
Trigger: ATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp GGTGTCTCTGGGCATCAGCACCCTCGCCACCCTCTCTaGGAGGCTGAGACAGGAGGTGTAGTGAAGAACTCG +
Preference number: 6 (lower is better)
Translates to: GVSGHQHPRHPL*EAETGGVVKNS
Trigger: CGAGTTCTTCACTACACCTCCTGTCTCAGCCTCCCAGAGAGGGTGGCGAGGGTGCTGATGCCCAGAGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS CAA 90 bp CGCTGCTGGCTGGCTTTCTGCTTGGCCCTCCGCTCCAGGAATTGTTaGGCAAATTCTTTGGCTTCCAGCGTGTCCCCCAGGCAGGAACGG +
Preference number: 6 (lower is better)
Translates to: RCWLAFCLALRSRNC*ANSLASSVSPRQER
Trigger: CCGTTCCTGCCTGGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CAA 90 bp CTGCCGCTGCTGGCTGGCTTTCTGCTTGGCCCTCCGCTCCAGGAATaGTTTGGCAAATTCTTTGGCTTCCAGCGTGTCCCCCAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: LPLLAGFLLGPPLQE*FGKFFGFQRVPQAG
Trigger: TCCTGCCTGGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CAA 90 bp GACCCCGGAAGGGCAGGTTCCCACCCTCGCCTCCTCACAGATACCTaGAGAGGCAAGAAGGCCCCAGAGGCATCAAAGGTGCCCATTTCT +
Preference number: 6 (lower is better)
Translates to: DPGRAGSHPRLLTDT*RGKKAPEASKVPIS
Trigger: AGAAATGGGCACCTTTGATGCCTCTGGGGCCTTCTTGCCTCTCAAGGTATCTGTGAGGAGGCGAGGGTGGGAACCTGCCCTTCCGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464111.1
CDS GCA 72 bp TGTAGCAACTTCAGCAATAGCTCCTGCTGCCGCACGTaGTTGCGCCGAAACAGCTCTTCCTCCTCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: CSNFSNSSCCRT*LRRNSSSSSCR
Trigger: GCGGCAGGAGGAGGAAGAGCTGTTTCGGCGCAAGCACGTGCGGCAGCAGGAGCTATTGCTGAAGTTGCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp AGCCCTCATCGCAGCCCCGCTTCACCAGCAGTGACATaGAAAAGTAGCCGGCCTGGAACCACTCTGCCATCT +
Preference number: 6 (lower is better)
Translates to: SPHRSPASPAVT*KSSRPGTTLPS
Trigger: AGATGGCAGAGTGGTTCCAGGCCGGCTACTTTTCCATGTCACTGCTGGTGAAGCGGGGCTGCGATGAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CAA 72 bp TCGTCCAAAGGCCCCATCGCCTTCTTCGATGCTTCTTaGGTAAAAGCAGCTGTCACCACGGCCGCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: SSKGPIAFFDAS*VKAAVTTAAAS
Trigger: CGAGGCCGCGGCCGTGGTGACAGCTGCTTTTACCAAAGAAGCATCGAAGAAGGCGATGGGGCCTTTGGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CAA 72 bp AGGGCAGGTTCCCACCCTCGCCTCCTCACAGATACCTaGAGAGGCAAGAAGGCCCCAGAGGCATCAAAGGTG +
Preference number: 6 (lower is better)
Translates to: RAGSHPRLLTDT*RGKKAPEASKV
Trigger: CACCTTTGATGCCTCTGGGGCCTTCTTGCCTCTCAAGGTATCTGTGAGGAGGCGAGGGTGGGAACCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464111.1
CDS CAA 90 bp AGCCATGCCTCCTGCTGCTGCTGCCGCTGCTGGCTGGCTTTCTGCTaGGCCCTCCGCTCCAGGAATTGTTTGGCAAATTCTTTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: SHASCCCCRCWLAFC*ALRSRNCLANSLAS
Trigger: GGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGCATGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS TCA 72 bp AGCTGGTGGGTCACCTGGGGTCTAAAAGGACTCACCTaGGCCAGCCACGTGGCCACTCACACCATGAGTTAC +
Preference number: 6 (lower is better)
Translates to: SWWVTWGLKGLT*ASHVATHTMSY
Trigger: GTAACTCATGGTGTGAGTGGCCACGTGGCTGGCTCAGGTGAGTCCTTTTAGACCCCAGGTGACCCACCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275732.5
CDS TCA 72 bp CTCCTCAAAGCCACATCGTGCTCCATCCCGCCTTGCTaGCTTCTCAAACCGCCTCTCGCCTCTGTCATCCCA +
Preference number: 6 (lower is better)
Translates to: LLKATSCSIPPC*LLKPPLASVIP
Trigger: TGGGATGACAGAGGCGAGAGGCGGTTTGAGAAGTCAGCAAGGCGGGATGGAGCACGATGTGGCTTTGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS GCA 72 bp TGCTGCTGCTGTAGCAACTTCAGCAATAGCTCCTGCTaGCGCACGTGCTTGCGCCGAAACAGCTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: CCCCSNFSNSSC*RTCLRRNSSSS
Trigger: GGAGGAAGAGCTGTTTCGGCGCAAGCACGTGCGGCAGCAGGAGCTATTGCTGAAGTTGCTACAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp TCCTCCGTCTTTTTGCGAATGGGCCGACCCGATAGGTaGCTGTATGAGTCACTGAGAGATGGGCTGCTCCGG +
Preference number: 6 (lower is better)
Translates to: SSVFLRMGRPDR*LYESLRDGLLR
Trigger: CCGGAGCAGCCCATCTCTCAGTGACTCATACAGCCACCTATCGGGTCGGCCCATTCGCAAAAAGACGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp CCTGCTGCTGCTGCCGCTGCTGGCTGGCTTTCTGCTTaGCCCTCCGCTCCAGGAATTGTTTGGCAAATTCTT +
Preference number: 6 (lower is better)
Translates to: PAAAAAAGWLSA*PSAPGIVWQIL
Trigger: AAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp CAAGCCACTGGGAATTGGTCTGACCTCAGTAGAGCCTaGGAGGGACCTTCACATCTGGGAAAGACCCGGGCT +
Preference number: 6 (lower is better)
Translates to: QATGNWSDLSRA*EGPSHLGKTRA
Trigger: AGCCCGGGTCTTTCCCAGATGTGAAGGTCCCTCCCAGGCTCTACTGAGGTCAGACCAATTCCCAGTGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643385.1
CDS CAA 72 bp TCCTGCTGCTGCTGCCGCTGCTGGCTGGCTTTCTGCTaGGCCCTCCGCTCCAGGAATTGTTTGGCAAATTCT +
Preference number: 6 (lower is better)
Translates to: SCCCCRCWLAFC*ALRSRNCLANS
Trigger: AGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS TCA 72 bp CTCAAATCCAGGGGCTTGGTCTGGGGAGAAACCCAGTaGAAAGGAGCAGGAGGTGACTCTAGGGCCACAGAC +
Preference number: 6 (lower is better)
Translates to: LKSRGLVWGETQ*KGAGGDSRATD
Trigger: GTCTGTGGCCCTAGAGTCACCTCCTGCTCCTTTTCACTGGGTTTCTCCCCAGACCAAGCCCCTGGATTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS CCA 72 bp GCCCATTTCTTCATCCTCATCGTCCAGGCACCACTCTaGGAGCCCATCCTTGTCCTCCTCAAAGCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: AHFFILIVQAPL*EPILVLLKAFR
Trigger: CCTGAAGGCTTTGAGGAGGACAAGGATGGGCTCCCAGAGTGGTGCCTGGACGATGAGGATGAAGAAATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275732.5
ENST00000464111.1
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp CAAGCCACTGGGAATTGGTCTGACCTCAGTAGAGCCTaGGAGGGACCTTCACATCTGGGAAAGACCCAGCTG +
Preference number: 6 (lower is better)
Translates to: QATGNWSDLSRA*EGPSHLGKTQL
Trigger: CAGCTGGGTCTTTCCCAGATGTGAAGGTCCCTCCCAGGCTCTACTGAGGTCAGACCAATTCCCAGTGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646601.1
CDS CAA 72 bp CTGGCTTTCTGCTTGGCCCTCCGCTCCAGGAATTGTTaGGCAAATTCTTTGGCTTCCAGCGTGTCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: LAFCLALRSRNC*ANSLASSVSPR
Trigger: CCTGGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CAA 72 bp CTGGCTGGCTTTCTGCTTGGCCCTCCGCTCCAGGAATaGTTTGGCAAATTCTTTGGCTTCCAGCGTGTCCCC +
Preference number: 6 (lower is better)
Translates to: LAGFLLGPPLQE*FGKFFGFQRVP
Trigger: GGGGACACGCTGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS TCA 72 bp TATAATCGTGGACATCATAGGGGGATTCCACCTCCTTaGGGATCGCTACAGCCATGGGCACGTCCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: YNRGHHRGIPPP*GSLQPWARPGC
Trigger: GCAGCCTGGACGTGCCCATGGCTGTAGCGATCCTCAAGGAGGTGGAATCCCCCTATGATGTCCACGATTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1
CDS CCA 72 bp ACGAGGATCTCAGGATACCAGCTGGGAAGCAGCCTCTaGCACCATCAGGTGGAAATAAGGTCAGGGCAATGG +
Preference number: 6 (lower is better)
Translates to: TRISGYQLGSSL*HHQVEIRSGQW
Trigger: CCATTGCCCTGACCTTATTTCCACCTGATGGTGCCAGAGGCTGCTTCCCAGCTGGTATCCTGAGATCCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS CCA 72 bp CAAGCCACTGGGAATTGGTCTGACCTCAGTAGAGCCTaGGAGGGACCTTCACATCTGGGAAAGACCCTTAAG +
Preference number: 6 (lower is better)
Translates to: QATGNWSDLSRA*EGPSHLGKTLK
Trigger: CTTAAGGGTCTTTCCCAGATGTGAAGGTCCCTCCCAGGCTCTACTGAGGTCAGACCAATTCCCAGTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275732.5
ENST00000678049.1
CDS TCA 72 bp TTATGTTGCAGCTGGAGTTGTTCTAGAATTGGACCCTaGGTCGAAGAGTTAATTGGTATGTCCCAAAGACTG +
Preference number: 6 (lower is better)
Translates to: LCCSWSCSRIGP*VEELIGMSQRL
Trigger: CAGTCTTTGGGACATACCAATTAACTCTTCGACTCAGGGTCCAATTCTAGAACAACTCCAGCTGCAACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275732.5
ENST00000646601.1
ENST00000678049.1