RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GHR (Homo sapiens)

Ensembl gene IDs: ENSG00000112964

Ensembl transcript IDs: ENST00000230882.9, ENST00000357703.6, ENST00000505006.1, ENST00000511135.5, ENST00000513671.5, ENST00000537449.5, ENST00000612382.4, ENST00000612626.4, ENST00000615111.4, ENST00000618088.4, ENST00000620156.4, ENST00000622294.2

Found 626 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTaGCCCGGGGAAAGGACCACACTACCTGCTGGTGTAATGTCGCTC +
Preference number: 1 (lower is better)
Translates to: ISGCMSHWDIPALFF*PGERTTLPAGVMSL
Trigger: GAGCGACATTACACCAGCAGGTAGTGTGGTCCTTTCCCCGGGCCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR CCA 90 bp TATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTaGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGG +
Preference number: 1 (lower is better)
Translates to: YEALWGLYYMNGGIV*DRHLRTWNMFSCPR
Trigger: CCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR CCA 90 bp TTTGTCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTaGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACAGGCAT +
Preference number: 1 (lower is better)
Translates to: FVRQGQGSRIEYEAL*GLYYMNGGIVWDRH
Trigger: ATGCCTGTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR GCA 90 bp TTGTCCATAAGGAAGTTTTCTTGGCAGAGTGAGACCATTTCCGGGTaGATGTCACATTGGGACATCCCTGCCTTATTCTTTTGGCCCGGG +
Preference number: 1 (lower is better)
Translates to: LSIRKFSWQSETISG*MSHWDIPALFFWPG
Trigger: CCCGGGCCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTGCCAAGAAAACTTCCTTATGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR TCA 90 bp GTGGCTGAGCAACCTCTGAGGTACCCTCATGTATGTCATTGGCATTaGAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTGGTACGTC +
Preference number: 1 (lower is better)
Translates to: VAEQPLRYPHVCHWH*NQSPECQVHNSWYV
Trigger: GACGTACCAGCTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGAGGGTACCTCAGAGGTTGCTCAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR TCA 90 bp TCCTCTTGGTTTAAGCTTGGCTGTATGTGTGATTCAACCTTGATGTaGGGAGCCACAGGGATGCACTTTTTGGCATCTGCCTCACAGAAG +
Preference number: 1 (lower is better)
Translates to: SSWFKLGCMCDSTLM*GATGMHFLASASQK
Trigger: CTTCTGTGAGGCAGATGCCAAAAAGTGCATCCCTGTGGCTCCTCACATCAAGGTTGAATCACACATACAGCCAAGCTTAAACCAAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR GCA 90 bp CGCTCACCTGGGCATAAAAGTCGATGTTTGACAGTGAACTTGGATTaGTTAGCTGAATATGGGCAGCTTGGTGAGTTGACTCAGCTCCTT +
Preference number: 1 (lower is better)
Translates to: RSPGHKSRCLTVNLD*LAEYGQLGELTQLL
Trigger: AAGGAGCTGAGTCAACTCACCAAGCTGCCCATATTCAGCTAAGCAATCCAAGTTCACTGTCAAACATCGACTTTTATGCCCAGGTGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR TCA 90 bp TGGTCAAGGCATAAGAGATCTGCTTCCCCTTTTAACCTCTGTGGCTaGGCAACCTCTGAGGTACCCTCATGTATGTCATTGGCATTGAAA +
Preference number: 1 (lower is better)
Translates to: WSRHKRSASPFNLCG*ATSEVPSCMSLALK
Trigger: TTTCAATGCCAATGACATACATGAGGGTACCTCAGAGGTTGCTCAGCCACAGAGGTTAAAAGGGGAAGCAGATCTCTTATGCCTTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR GCA 90 bp TTCAACCTTGATGTGAGGAGCCACAGGGATGCACTTTTTGGCATCTaGCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGGCA +
Preference number: 1 (lower is better)
Translates to: FNLDVRSHRDALFGI*LTEVGIVHKEVFLA
Trigger: TGCCAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAGTGCATCCCTGTGGCTCCTCACATCAAGGTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR TCA 90 bp ATATCTGCATTGCGTGGTGCTTCCCATCTCACTTGGATATCTGCATaGATCCCAGTTAAACTGACGTTCAGTAAAGTCCAGTTGAGGGCA +
Preference number: 1 (lower is better)
Translates to: ISALRGASHLTWISA*IPVKLTFSKVQLRA
Trigger: TGCCCTCAACTGGACTTTACTGAACGTCAGTTTAACTGGGATTCATGCAGATATCCAAGTGAGATGGGAAGCACCACGCAATGCAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR GCA 90 bp GAAGTTCATACTCCAGAACCATCCATCCTTTCTGAATATCTGCATTaGGTGGTGCTTCCCATCTCACTTGGATATCTGCATGAATCCCAG +
Preference number: 1 (lower is better)
Translates to: EVHTPEPSILSEYLH*VVLPISLGYLHESQ
Trigger: CTGGGATTCATGCAGATATCCAAGTGAGATGGGAAGCACCACGCAATGCAGATATTCAGAAAGGATGGATGGTTCTGGAGTATGAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR GCA 90 bp CGCCATCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTaGTTAGAAGTCTGTCTGTGTCTGATTCCTCAGTCTTTTCATCTG +
Preference number: 1 (lower is better)
Translates to: RHPSPLGYYVISHGH*LEVCLCLIPQSFHL
Trigger: CAGATGAAAAGACTGAGGAATCAGACACAGACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGATGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR GCA 90 bp GTATTGAAGTTCATACTCCAGAACCATCCATCCTTTCTGAATATCTaGATTGCGTGGTGCTTCCCATCTCACTTGGATATCTGCATGAAT +
Preference number: 1 (lower is better)
Translates to: VLKFILQNHPSFLNI*IAWCFPSHLDICMN
Trigger: ATTCATGCAGATATCCAAGTGAGATGGGAAGCACCACGCAATGCAGATATTCAGAAAGGATGGATGGTTCTGGAGTATGAACTTCAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR GCA 90 bp ACACAGTCTTTGAAGCTAGCTGGATTTCAGTTTGAATCCCAGCTGTaGAACTTGCTAGTAATGTTACATAAGTTCTCTAAGCTCCAGTTT +
Preference number: 1 (lower is better)
Translates to: TQSLKLAGFQFESQL*NLLVMLHKFSKLQF
Trigger: AAACTGGAGCTTAGAGAACTTATGTAACATTACTAGCAAGTTGCACAGCTGGGATTCAAACTGAAATCCAGCTAGCTTCAAAGACTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513671.5
3UTR-3UTR TCA 90 bp CAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCAGCAGTGGCTGAGCAACCTCTaGGGTACCCTCATGTATGTC +
Preference number: 2 (lower is better)
Translates to: QASQNLEHVLLSQASQQQWLSNL*GTLMYV
Trigger: GACATACATGAGGGTACCTCAGAGGTTGCTCAGCCA...CTGCTGCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR TCA 90 bp TCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTGGGGACTGTACTATAACACTGGGCTGCTaGGTAGCAGGGCAAGCATCA +
Preference number: 2 (lower is better)
Translates to: SGKGKAVALSMRPCGDCTITLGC*VAGQAS
Trigger: TGATGCTTGCCCTGCTACTCAGCAGCCCAGTGTTAT...AGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR GCA 90 bp CAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCAGCAGGAGACCATTTCCGGGTaGATGTCACATTGGGACATC +
Preference number: 2 (lower is better)
Translates to: QASQNLEHVLLSQASQQQETISG*MSHWDI
Trigger: GATGTCCCAATGTGACATGCACCCGGAAATGGTCTC...CTGCTGCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR CCA 90 bp TGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCGTTGAGGGCAATGGGTaGATCTGGTTGCACTATTTC +
Preference number: 2 (lower is better)
Translates to: WDRHLRTWNMFSCPRPPSVEGNG*IWLHYF
Trigger: GAAATAGTGCAACCAGATCCACCCATTGCCCTCAAC...GCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR CAA 90 bp CATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTaGGCCCGGGGAAAGGACCACACTACCTGCTGGTGTAATGTCGCT +
Preference number: 2 (lower is better)
Translates to: HFRVHVTLGHPCLIL*ARGKDHTTCWCNVA
Trigger: AGCGACATTACACCAGCAGGTAGTGTGGTCCTTTCCCCGGGCCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR TCA 90 bp TCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTGGGGACTGTACTGCTTGGCTGTATGTGTaGTTCAACCTTGATGTGAGG +
Preference number: 2 (lower is better)
Translates to: SGKGKAVALSMRPCGDCTAWLYV*FNLDVR
Trigger: CCTCACATCAAGGTTGAATCACACATACAGCCAAGC...AGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR CCA 90 bp TGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCGATTCCTTTAATCTTTaGAACTGGAACTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: WDRHLRTWNMFSCPRPPSDSFNL*NWNWGQ
Trigger: CTGCCCCCAGTTCCAGTTCCAAAGATTAAAGGAATC...GCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGGCACGGGAATCGCCTaGACCTGTGGGAGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISGTGIA*TCGRWR
Trigger: TCTCCACCTCCCACAGGTTCAGGCGATTCCCGTGCC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR TCA 90 bp TGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCGTATGTCATTGGCATTaGAATCAGTCTCCAGAATGT +
Preference number: 2 (lower is better)
Translates to: WDRHLRTWNMFSCPRPPSVCHWH*NQSPEC
Trigger: ACATTCTGGAGACTGATTTCAATGCCAATGACATAC...GCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR GCA 90 bp TGGCAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTAATCTGCATTGCGTGGTaGTTCCCATCTCACTTGGAT +
Preference number: 2 (lower is better)
Translates to: WQSETISGCMSHWDIPALICIAW*FPSHLD
Trigger: ATCCAAGTGAGATGGGAAGCACCACGCAATGCAGAT...TAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR GCA 90 bp TGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCATTTCTCATGGTCACTaGTTAGAAGTCTGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: WDRHLRTWNMFSCPRPPSISHGH*LEVCLC
Trigger: ACACAGACAGACTTCTAAGCAGTGACCATGAGAAAT...GCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR CCA 90 bp TCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTGGGGACTGTACTATTGTTGAAGGAGTCTaGGGAGGTATAAAAGGGCTT +
Preference number: 2 (lower is better)
Translates to: SGKGKAVALSMRPCGDCTIVEGV*GGIKGL
Trigger: AAGCCCTTTTATACCTCCCCAGACTCCTTCAACAAT...AGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622294.2
3UTR-3UTR CCA 90 bp CAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCAGCAGAGTAGGAAGTGGTTGTaGTTTGTTTTTCTCTGCTTG +
Preference number: 2 (lower is better)
Translates to: QASQNLEHVLLSQASQQQSRKWL*FVFLCL
Trigger: CAAGCAGAGAAAAACAAACCACAACCACTTCCTACT...CTGCTGCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR TCA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACTCAGTAAAGTCCAGTTaGGGGCAATGGGTGGATCTG +
Preference number: 2 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDSVKSS*GQWVDL
Trigger: CAGATCCACCCATTGCCCTCAACTGGACTTTACTGA...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR TCA 90 bp CAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCCATAGAGCACCTCACTaGACTCGCCATAATTTCCAG +
Preference number: 2 (lower is better)
Translates to: QSETISGCMSHWDIPALFHRAPH*TRHNFQ
Trigger: CTGGAAATTATGGCGAGTTCAGTGAGGTGCTCTATG...GAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR TCA 90 bp AGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTGGCTGAGCAACCTCTaGGGTACCCTCATGTATGTC +
Preference number: 2 (lower is better)
Translates to: SETISGCMSHWDIPALFFWLSNL*GTLMYV
Trigger: GACATACATGAGGGTACCTCAGAGGTTGCTCAGCCA...AAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCACCGCACTCTAGCCTaGCGACAGAGCGAGACTCTG +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISHRTLA*RQSETL
Trigger: CAGAGTCTCGCTCTGTCGCCAGGCTAGAGTGCGGTG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGGAGGCCGAGTCGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISGGRVG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCGACTCGGCCTCC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CCA 90 bp TGGCAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTACTTTGGAACTGGAACTaGGGGCAGAATCAGCATTTT +
Preference number: 2 (lower is better)
Translates to: WQSETISGCMSHWDIPALLWNWN*GQNQHF
Trigger: AAAATGCTGATTCTGCCCCCAGTTCCAGTTCCAAAG...TAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CCA 90 bp AGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTGACCACACTACCTGCTaGTGTAATGTCGCTCACCTG +
Preference number: 2 (lower is better)
Translates to: SETISGCMSHWDIPALFFDHTTC*CNVAHL
Trigger: CAGGTGAGCGACATTACACCAGCAGGTAGTGTGGTC...AAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAGGTGGAGATTGCAGTaGGTCAAGATCGCGCCACCG +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISRWRLQ*VKIAPP
Trigger: CGGTGGCGCGATCTTGACTCACTGCAATCTCCACCT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR TCA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACACCATCCATCCTTTCTaGATATCTGCATTGCGTGGT +
Preference number: 2 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDTIHPF*ISALRG
Trigger: ACCACGCAATGCAGATATTCAGAAAGGATGGATGGT...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGTGGGAGGTGGAGATTaGAGTGAGTCAAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISVGGGD*SESRSR
Trigger: GCGCGATCTTGACTCACTGCAATCTCCACCTCCCAC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR GCA 90 bp GAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTGGTCCTTTCTGAATATCTaGATTGCGTGGTGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: ETISGCMSHWDIPALFFWSFLNI*IAWCFP
Trigger: TGGGAAGCACCACGCAATGCAGATATTCAGAAAGGA...CCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCCTGGCCAACATGGTaGAACCCCGTCTCTGCTAAA +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSWPTW*NPVSAK
Trigger: TTTAGCAGAGACGGGGTTTCACCATGTTGGCCAGGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR TCA 90 bp GAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTGGGAATCCCAGTTAAACTaGCGTTCAGTAAAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: ETISGCMSHWDIPALFFWESQLN*RSVKSS
Trigger: ACTGGACTTTACTGAACGTCAGTTTAACTGGGATTC...CCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAGGGGTCATACCAACTaGAGTACACAGTGTGTAGTG +
Preference number: 2 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPRGHTN*STQCVV
Trigger: CACTACACACTGTGTACTGCAGTTGGTATGACCCCT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAATCGCCTGAACCTGTaGGAGGTGGAGATTGCAGTG +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISNRLNL*EVEIAV
Trigger: CACTGCAATCTCCACCTCCCACAGGTTCAGGCGATT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CCA 90 bp GAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTGGTTTAATCTTTGGAACTaGAACTGGGGGCAGAATCAG +
Preference number: 2 (lower is better)
Translates to: ETISGCMSHWDIPALFFWFNLWN*NWGQNQ
Trigger: CTGATTCTGCCCCCAGTTCCAGTTCCAAAGATTAAA...CCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCAGGTTCACAACAGCTaGTACGTCCAGAGTCGCCAT +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISQVHNS*YVQSRH
Trigger: ATGGCGACTCTGGACGTACCAGCTGTTGTGAACCTG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
3UTR-3UTR CCA 90 bp CTTTCTAATCTCAGAGCCTTGGTAGGTAGGGGTAGTATGCAGCAGCAGAAAGAAGCCAAGAGCAAAGAGTaGAAAAACCAAGCTACAGGG +
Preference number: 2 (lower is better)
Translates to: LSNLRALVGRGSMQQQKEAKSKE*KNQATG
Trigger: CCCTGTAGCTTGGTTTTTCCACTCTTTGCTCTTGGC...TTCTTTCTGCTGCTGCATACTACCCCTACCTACCAAGGCTCTGAGATTAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513671.5
3UTR-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCTGAATGCTTGCTTTaGGGCCAGTCCACTCAGAGA +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSECLL*GQSTQR
Trigger: TCTCTGAGTGGACTGGCCTCAAAGCAAGCATTCAGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCAATGCTCTCAAGAATaGTGTTTAGGGCTGGGCACG +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISQCSQE*CLGLGT
Trigger: CGTGCCCAGCCCTAAACATCATTCTTGAGAGCATTG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR TCA 90 bp GAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTGGGTATGTCATTGGCATTaGAATCAGTCTCCAGAATGT +
Preference number: 2 (lower is better)
Translates to: ETISGCMSHWDIPALFFWVCHWH*NQSPEC
Trigger: ACATTCTGGAGACTGATTTCAATGCCAATGACATAC...CCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGTTTTCTTGGCAGAGTaGGACCATTTCCGGGTGCAT +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISVFLAE*DHFRVH
Trigger: ATGCACCCGGAAATGGTCTCACTCTGCCAAGAAAAC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
3UTR-3UTR GCA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGAAGGACCACACTACCTaGTGGTGTAATGTCGCTCAC +
Preference number: 2 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLKDHTT*WCNVAH
Trigger: GTGAGCGACATTACACCAGCAGGTAGTGTGGTCCTT...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR GCA 90 bp CCCAGTCAATTCTTTGCTATTAAATACGTAGCTCTTGGGAAACCAAAGAAAGGCGAGGAGCCACAGGGATaGACTTTTTGGCATCTGCCT +
Preference number: 2 (lower is better)
Translates to: PSQFFAIKYVALGKPKKGEEPQG*TFWHLP
Trigger: AGGCAGATGCCAAAAAGTGCATCCCTGTGGCTCCTC...GCCTTTCTTTGGTTTCCCAAGAGCTACGTATTTAATAGCAAAGAATTGACTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAAAATTAGCCTGGCATaGTGGTGCGTGCCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISKISLA*WCVPVV
Trigger: GACTACAGGCACGCACCACCATGCCAGGCTAATTTT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CCA 90 bp CCCAGTCAATTCTTTGCTATTAAATACGTAGCTCTTGGGAAACCAAAGAAAGGCCAGGTTCACAACAGCTaGTACGTCCAGAGTCGCCAT +
Preference number: 2 (lower is better)
Translates to: PSQFFAIKYVALGKPKKGQVHNS*YVQSRH
Trigger: ATGGCGACTCTGGACGTACCAGCTGTTGTGAACCTG...GCCTTTCTTTGGTTTCCCAAGAGCTACGTATTTAATAGCAAAGAATTGACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGTATCTTGGTCAGTGTaGACCAGCTATGATTTCTAC +
Preference number: 2 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPVSWSV*TSYDFY
Trigger: GTAGAAATCATAGCTGGTTCACACTGACCAAGATAC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR TCA 90 bp CCCAGTCAATTCTTTGCTATTAAATACGTAGCTCTTGGGAAACCAAAGAAAGGCTGTGTGATTCAACCTTaGTGTGAGGAGCCACAGGGA +
Preference number: 2 (lower is better)
Translates to: PSQFFAIKYVALGKPKKGCVIQP*CEEPQG
Trigger: TCCCTGTGGCTCCTCACATCAAGGTTGAATCACACA...GCCTTTCTTTGGTTTCCCAAGAGCTACGTATTTAATAGCAAAGAATTGACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAATTGTTGAAGGAGTCTaGGGAGGTATAAAAGGGCTT +
Preference number: 2 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPIVEGV*GGIKGL
Trigger: AAGCCCTTTTATACCTCCCCAGACTCCTTCAACAAT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CCA 90 bp CATCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCGGCAATGGGTGGATCTaGTTGCACTATTTCATCAAC +
Preference number: 2 (lower is better)
Translates to: HPSPLGYYVISHGHCLEVGNGWI*LHYFIN
Trigger: GTTGATGAAATAGTGCAACCAGATCCACCCATTGCC...GACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CCA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACTTCCTTGAGGAGATCTaGATCGATTCCTTTAATCTT +
Preference number: 2 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDFLEEI*IDSFNL
Trigger: AAGATTAAAGGAATCGATCCAGATCTCCTCAAGGAA...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAGTGTGAACCAGCTATaGTTTCTACTTCTCTTAGCA +
Preference number: 2 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSVNQL*FLLLLA
Trigger: TGCTAAGAGAAGTAGAAATCATAGCTGGTTCACACT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGGCTTAAACGTTATTaGCCCAGTCAATTCTTTGCT +
Preference number: 2 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPWLKRY*PSQFFA
Trigger: AGCAAAGAATTGACTGGGGCAATAACGTTTAAGCCA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTTCTTCTGAATGCTTaGTTTGAGGCCAGTCCACTC +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISFLLNA*FEASPL
Trigger: GAGTGGACTGGCCTCAAAGCAAGCATTCAGAAGAAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGTATCTTGGTCAGTGTaGACCAGCTATGATTTCTAC +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISVSWSV*TSYDFY
Trigger: GTAGAAATCATAGCTGGTTCACACTGACCAAGATAC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGTTATCTGTGGGGACTaGAAACCTTGTTTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISVICGD*KPCFFC
Trigger: ACAGAAGAAACAAGGTTTTCAGTCCCCACAGATAAC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGCTTCTTTTTCTTCTaGATGCTTGCTTTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISCFFFF*MLALRP
Trigger: TGGCCTCAAAGCAAGCATTCAGAAGAAAAAGAAGCA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR GCA 90 bp CATCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGGCTTAAACGTTATTaGCCCAGTCAATTCTTTGCT +
Preference number: 2 (lower is better)
Translates to: HPSPLGYYVISHGHCLEVWLKRY*PSQFFA
Trigger: AGCAAAGAATTGACTGGGGCAATAACGTTTAAGCCA...GACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGTGAACAGATTCCGCTaGAGAGGCTATAGATCTTAT +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISVNRFR*RGYRSY
Trigger: ATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCAC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR GCA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGTCTGAATATCTGCATTaGGTGGTGCTTCCCATCTCA +
Preference number: 2 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQSEYLH*VVLPIS
Trigger: TGAGATGGGAAGCACCACGCAATGCAGATATTCAGA...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTATTGTTGAAGGAGTCTaGGGAGGTATAAAAGGGCTT +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISIVEGV*GGIKGL
Trigger: AAGCCCTTTTATACCTCCCCAGACTCCTTCAACAAT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CCA 90 bp ATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTGGTACAGAGTTTCGTTGTTTaGATCTCACACGCACTTCAT +
Preference number: 2 (lower is better)
Translates to: MSLALKSVSRMSGSQQLVQSFVV*ISHALH
Trigger: ATGAAGTGCGTGTGAGATCCAAACAACGAAACTCTG...TACCAGCTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR CAA 90 bp TACATAGAGCACCTCACTGAACTCGCCATAATTTCCAGAGTTTCGTaGTTTGGATCTCACACGCACTTCATATTCCTTATCCACTTTCAA +
Preference number: 2 (lower is better)
Translates to: YIEHLTELAIISRVS*FGSHTHFIFLIHFQ
Trigger: TTGAAAGTGGATAAGGAATATGAAGTGCGTGTGAGATCCAAACAACGAAACTCTGGAAATTATGGCGAGTTCAGTGAGGTGCTCTATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR CAA 90 bp TCTTTGAAGCTAGCTGGATTTCAGTTTGAATCCCAGCTGTGCAACTaGCTAGTAATGTTACATAAGTTCTCTAAGCTCCAGTTTTCCCGT +
Preference number: 2 (lower is better)
Translates to: SLKLAGFQFESQLCN*LVMLHKFSKLQFSR
Trigger: ACGGGAAAACTGGAGCTTAGAGAACTTATGTAACATTACTAGCAAGTTGCACAGCTGGGATTCAAACTGAAATCCAGCTAGCTTCAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513671.5
3UTR-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAGTGTGAACCAGCTATaGTTTCTACTTCTCTTAGCA +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSVNQL*FLLLLA
Trigger: TGCTAAGAGAAGTAGAAATCATAGCTGGTTCACACT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR TCA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGAGTGTGAACCAGCTATaGTTTCTACTTCTCTTAGCA +
Preference number: 2 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLSVNQL*FLLLLA
Trigger: TGCTAAGAGAAGTAGAAATCATAGCTGGTTCACACT...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622294.2
3UTR-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGGCTTAAACGTTATTaGCCCAGTCAATTCTTTGCT +
Preference number: 2 (lower is better)
Translates to: RAIAALKYLGQCEPAMISWLKRY*PSQFFA
Trigger: AGCAAAGAATTGACTGGGGCAATAACGTTTAAGCCA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR GCA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGTGGCTTAAACGTTATTaGCCCAGTCAATTCTTTGCT +
Preference number: 2 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQWLKRY*PSQFFA
Trigger: AGCAAAGAATTGACTGGGGCAATAACGTTTAAGCCA...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR GCA 90 bp CCCAGTCAATTCTTTGCTATTAAATACGTAGCTCTTGGGAAACCAAAGAAAGGCATTTCTCATGGTCACTaGTTAGAAGTCTGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: PSQFFAIKYVALGKPKKGISHGH*LEVCLC
Trigger: ACACAGACAGACTTCTAAGCAGTGACCATGAGAAAT...GCCTTTCTTTGGTTTCCCAAGAGCTACGTATTTAATAGCAAAGAATTGACTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR TCA 90 bp ATTCGGGTTTATAGCTATCATGAATGGCTAAGATTGTGTTCACCTCCTCTAATTACTTGGATATCTGCATaGATCCCAGTTAAACTGACG +
Preference number: 2 (lower is better)
Translates to: IRVYSYHEWLRLCSPPLITWISA*IPVKLT
Trigger: CGTCAGTTTAACTGGGATTCATGCAGATATCCAAGT...AATTAGAGGAGGTGAACACAATCTTAGCCATTCATGATAGCTATAAACCCGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CAA 90 bp TGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCTGTAGCAAAACCAAGTaGGGTGTGAACAGATTCCGC +
Preference number: 3 (lower is better)
Translates to: WDRHLRTWNMFSCPRPPSCSKTK*GVNRFR
Trigger: GCGGAATCTGTTCACACCCAACTTGGTTTTGCTACA...GCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
3UTR CCA 72 bp TGGCAGAGTGAGACCATTTCCGGGTGCATGTCACATTaGGACATCCCTGCCTTATTCTTTTGGCCCGGGGAA +
Preference number: 3 (lower is better)
Translates to: WQSETISGCMSH*DIPALFFWPGE
Trigger: TTCCCCGGGCCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR CAA 90 bp TCTGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCACCAGAGTTTCGTTGTTaGGATCTCACACGCACTTCA +
Preference number: 3 (lower is better)
Translates to: SGTGISEPGTCSPVPGLPPEFRC*DLTRTS
Trigger: TGAAGTGCGTGTGAGATCCAAACAACGAAACTCTGG...TGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CAA 90 bp TGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCATTTCCAGAGTTTCGTaGTTTGGATCTCACACGCAC +
Preference number: 3 (lower is better)
Translates to: WDRHLRTWNMFSCPRPPSISRVS*FGSHTH
Trigger: GTGCGTGTGAGATCCAAACAACGAAACTCTGGAAAT...GCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CAA 90 bp CAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCAGCAGCCCTCATGTATGTCATaGGCATTGAAATCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: QASQNLEHVLLSQASQQQPSCMS*ALKSVS
Trigger: GGAGACTGATTTCAATGCCAATGACATACATGAGGG...CTGCTGCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR CCA 72 bp TGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTaGCCCGGGGAAAGGACCACACTACCTGCTGGTGTA +
Preference number: 3 (lower is better)
Translates to: CMSHWDIPALFF*PGERTTLPAGV
Trigger: TACACCAGCAGGTAGTGTGGTCCTTTCCCCGGGCCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR CAA 90 bp CAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCAGCAGGGAAGTGGTTGTGGTTaGTTTTTCTCTGCTTGGATA +
Preference number: 3 (lower is better)
Translates to: QASQNLEHVLLSQASQQQGSGCG*FFSAWI
Trigger: TATCCAAGCAGAGAAAAACAAACCACAACCACTTCC...CTGCTGCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR CAA 90 bp TCTGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAAGCCTGTGCTATGGTTaGCATTCAATTTTCCTGAAC +
Preference number: 3 (lower is better)
Translates to: SGTGISEPGTCSPVPGLPSLCYG*HSIFLN
Trigger: GTTCAGGAAAATTGAATGCAAACCATAGCACAGGCT...TGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
3UTR-3UTR CAA 90 bp TGGCAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCAGTAAAGTCCAGTaGAGGGCAATGGGTGGATCT +
Preference number: 3 (lower is better)
Translates to: WQSETISGCMSHWDIPALFSKVQ*RAMGGS
Trigger: AGATCCACCCATTGCCCTCAACTGGACTTTACTGAA...TAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CAA 90 bp TCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTGGGGACTGTACTTTCAGTAGGAAGTGGTaGTGGTTTGTTTTTCTCTGC +
Preference number: 3 (lower is better)
Translates to: SGKGKAVALSMRPCGDCTFSRKW*WFVFLC
Trigger: GCAGAGAAAAACAAACCACAACCACTTCCTACTGAA...AGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR CCA 72 bp CAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTaGGGACTGTACTATATGAATGGAGGTATAGTCTGG +
Preference number: 3 (lower is better)
Translates to: QGQGSRIEYEAL*GLYYMNGGIVW
Trigger: CCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGTAATCCCAGCACTTaGGGAGGCCGAGTCGGGTGG +
Preference number: 3 (lower is better)
Translates to: RAIAALKYLGQCEPAMISCNPST*GGRVGW
Trigger: CCACCCGACTCGGCCTCCCAAAGTGCTGGGATTACA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp TCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTGGGGACTGTACTTGTTTGACAGTGAACTaGGATTGCTTAGCTGAATAT +
Preference number: 3 (lower is better)
Translates to: SGKGKAVALSMRPCGDCTCLTVN*DCLAEY
Trigger: ATATTCAGCTAAGCAATCCAAGTTCACTGTCAAACA...AGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR GCA 72 bp GATGTGAGGAGCCACAGGGATGCACTTTTTGGCATCTaGCTCACAGAAGTAGGCATTGTCCATAAGGAAGTT +
Preference number: 3 (lower is better)
Translates to: DVRSHRDALFGI*LTEVGIVHKEV
Trigger: AACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAGTGCATCCCTGTGGCTCCTCACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR CCA 72 bp CTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTaGGACAGGCATCTCAGAACCTGGAACATGTTCTCC +
Preference number: 3 (lower is better)
Translates to: LWGLYYMNGGIV*DRHLRTWNMFS
Trigger: GGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR CAA 90 bp AGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTGCTTCCCATCTCACTaGGATATCTGCATGAATCCC +
Preference number: 3 (lower is better)
Translates to: SETISGCMSHWDIPALFFCFPSH*DICMNP
Trigger: GGGATTCATGCAGATATCCAAGTGAGATGGGAAGCA...AAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CAA 90 bp TCTAATCTCAGAGCCTTGGTAGGTAGGGGTAGTATGCAGCAGCAGAAAGAACACCATGCTTCCTTCAAGTaGGTGAGCTTCTCTACTCTG +
Preference number: 3 (lower is better)
Translates to: SNLRALVGRGSMQQQKEHHASFK*VSFSTL
Trigger: CAGAGTAGAGAAGCTCACCAACTTGAAGGAAGCATG...GTGTTCTTTCTGCTGCTGCATACTACCCCTACCTACCAAGGCTCTGAGATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513671.5
3UTR-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCACTCCGCGTGCAATaGCAGCACTTAAGTATCTTG +
Preference number: 3 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSLRVQ*QHLSIL
Trigger: CAAGATACTTAAGTGCTGCAATTGCACGCGGAGTGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGCGGGTGCATGTCACATaGGGACATCCCTGCCTTATT +
Preference number: 3 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLRVHVT*GHPCLI
Trigger: AATAAGGCAGGGATGTCCCAATGTGACATGCACCCG...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR TCA 72 bp CATAAGAGATCTGCTTCCCCTTTTAACCTCTGTGGCTaGGCAACCTCTGAGGTACCCTCATGTATGTCATTG +
Preference number: 3 (lower is better)
Translates to: HKRSASPFNLCG*ATSEVPSCMSL
Trigger: CAATGACATACATGAGGGTACCTCAGAGGTTGCTCAGCCACAGAGGTTAAAAGGGGAAGCAGATCTCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR TCA 72 bp TTTAAGCTTGGCTGTATGTGTGATTCAACCTTGATGTaGGGAGCCACAGGGATGCACTTTTTGGCATCTGCC +
Preference number: 3 (lower is better)
Translates to: FKLGCMCDSTLM*GATGMHFLASA
Trigger: GGCAGATGCCAAAAAGTGCATCCCTGTGGCTCCTCACATCAAGGTTGAATCACACATACAGCCAAGCTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR GCA 72 bp AGGAAGTTTTCTTGGCAGAGTGAGACCATTTCCGGGTaGATGTCACATTGGGACATCCCTGCCTTATTCTTT +
Preference number: 3 (lower is better)
Translates to: RKFSWQSETISG*MSHWDIPALFF
Trigger: AAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTGCCAAGAAAACTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTGGTGCCTGGTAAGTaGATCTGTGCAAACGCTTTA +
Preference number: 3 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPLVPGK*ICANAL
Trigger: TAAAGCGTTTGCACAGATCAACTTACCAGGCACCAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACAGCACTTAAGTATCTaGGTCAGTGTGAACCAGCTA +
Preference number: 3 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPQHLSI*VSVNQL
Trigger: TAGCTGGTTCACACTGACCAAGATACTTAAGTGCTG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp GAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTGGTGTATGTCATTGGCATaGAAATCAGTCTCCAGAATG +
Preference number: 3 (lower is better)
Translates to: ETISGCMSHWDIPALFFWCMSLA*KSVSRM
Trigger: CATTCTGGAGACTGATTTCAATGCCAATGACATACA...CCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR TCA 72 bp TTGCGTGGTGCTTCCCATCTCACTTGGATATCTGCATaGATCCCAGTTAAACTGACGTTCAGTAAAGTCCAG +
Preference number: 3 (lower is better)
Translates to: LRGASHLTWISA*IPVKLTFSKVQ
Trigger: CTGGACTTTACTGAACGTCAGTTTAACTGGGATTCATGCAGATATCCAAGTGAGATGGGAAGCACCACGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR TCA 72 bp GGCTCATCTGAGGAAGTGTTACATAGAGCACCTCACTaGACTCGCCATAATTTCCAGAGTTTCGTTGTTTGG +
Preference number: 3 (lower is better)
Translates to: GSSEEVLHRAPH*TRHNFQSFVVW
Trigger: CCAAACAACGAAACTCTGGAAATTATGGCGAGTTCAGTGAGGTGCTCTATGTAACACTTCCTCAGATGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR TCA 72 bp CAACCTCTGAGGTACCCTCATGTATGTCATTGGCATTaGAATCAGTCTCCAGAATGTCAGGTTCACAACAGC +
Preference number: 3 (lower is better)
Translates to: QPLRYPHVCHWH*NQSPECQVHNS
Trigger: GCTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGAGGGTACCTCAGAGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR TCA 72 bp CTTGGTTTAAGCTTGGCTGTATGTGTGATTCAACCTTaGTGTGAGGAGCCACAGGGATGCACTTTTTGGCAT +
Preference number: 3 (lower is better)
Translates to: LGLSLAVCVIQP*CEEPQGCTFWH
Trigger: ATGCCAAAAAGTGCATCCCTGTGGCTCCTCACATCAAGGTTGAATCACACATACAGCCAAGCTTAAACCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR GCA 72 bp TGTAGCAAAACCAAGTTGGGTGTGAACAGATTCCGCTaGAGAGGCTATAGATCTTATCTCTCACCATCTGCA +
Preference number: 3 (lower is better)
Translates to: CSKTKLGVNRFR*RGYRSYLSPSA
Trigger: TGCAGATGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTTGGTTTTGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR GCA 72 bp ACTCCAGAACCATCCATCCTTTCTGAATATCTGCATTaGGTGGTGCTTCCCATCTCACTTGGATATCTGCAT +
Preference number: 3 (lower is better)
Translates to: TPEPSILSEYLH*VVLPISLGYLH
Trigger: ATGCAGATATCCAAGTGAGATGGGAAGCACCACGCAATGCAGATATTCAGAAAGGATGGATGGTTCTGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAGCCTGTGCTATGGTTaGCATTCAATTTTCCTGAAC +
Preference number: 3 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSLCYG*HSIFLN
Trigger: GTTCAGGAAAATTGAATGCAAACCATAGCACAGGCT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCACTCCGCGTGCAATaGCAGCACTTAAGTATCTTG +
Preference number: 3 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSLRVQ*QHLSIL
Trigger: CAAGATACTTAAGTGCTGCAATTGCACGCGGAGTGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGTAGCAAAACCAAGTaGGGTGTGAACAGATTCCGC +
Preference number: 3 (lower is better)
Translates to: RAIAALKYLGQCEPAMISCSKTK*GVNRFR
Trigger: GCGGAATCTGTTCACACCCAACTTGGTTTTGCTACA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR GCA 72 bp TCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTaGTTAGAAGTCTGTCTGTGTCTGATTCCTCAGTCT +
Preference number: 3 (lower is better)
Translates to: SPLGYYVISHGH*LEVCLCLIPQS
Trigger: AGACTGAGGAATCAGACACAGACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR GCA 72 bp GGGCATAAAAGTCGATGTTTGACAGTGAACTTGGATTaGTTAGCTGAATATGGGCAGCTTGGTGAGTTGACT +
Preference number: 3 (lower is better)
Translates to: GHKSRCLTVNLD*LAEYGQLGELT
Trigger: AGTCAACTCACCAAGCTGCCCATATTCAGCTAAGCAATCCAAGTTCACTGTCAAACATCGACTTTTATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR CCA 72 bp CAGAACCATCCATCCTTTCTGAATATCTGCATTGCGTaGTGCTTCCCATCTCACTTGGATATCTGCATGAAT +
Preference number: 3 (lower is better)
Translates to: QNHPSFLNICIA*CFPSHLDICMN
Trigger: ATTCATGCAGATATCCAAGTGAGATGGGAAGCACCACGCAATGCAGATATTCAGAAAGGATGGATGGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAACAATCATTTTAGAATaGTTGAAGGAGTCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPTIILE*LKESGE
Trigger: CTCCCCAGACTCCTTCAACAATTCTAAAATGATTGT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTGGTGCCTGGTAAGTaGATCTGTGCAAACGCTTTA +
Preference number: 3 (lower is better)
Translates to: RAIAALKYLGQCEPAMISLVPGK*ICANAL
Trigger: TAAAGCGTTTGCACAGATCAACTTACCAGGCACCAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTGCTTTTACTTCTTTaGGTGCCTGGTAAGTTGATC +
Preference number: 3 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPLLLLL*VPGKLI
Trigger: GATCAACTTACCAGGCACCAAAAGAAGTAAAAGCAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGGCATCAACCAAGATTaGGTGAAGAAAGGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPGINQD*VKKGFL
Trigger: AAGAAAACCTTTCTTCACCAAATCTTGGTTGATGCC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCAGCACTTAAGTATCTaGGTCAGTGTGAACCAGCTA +
Preference number: 3 (lower is better)
Translates to: RAIAALKYLGQCEPAMISQHLSI*VSVNQL
Trigger: TAGCTGGTTCACACTGACCAAGATACTTAAGTGCTG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAGCCTGTGCTATGGTTaGCATTCAATTTTCCTGAAC +
Preference number: 3 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSLCYG*HSIFLN
Trigger: GTTCAGGAAAATTGAATGCAAACCATAGCACAGGCT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp CCCAGTCAATTCTTTGCTATTAAATACGTAGCTCTTGGGAAACCAAAGAAAGGCCAGCACTTAAGTATCTaGGTCAGTGTGAACCAGCTA +
Preference number: 3 (lower is better)
Translates to: PSQFFAIKYVALGKPKKGQHLSI*VSVNQL
Trigger: TAGCTGGTTCACACTGACCAAGATACTTAAGTGCTG...GCCTTTCTTTGGTTTCCCAAGAGCTACGTATTTAATAGCAAAGAATTGACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
3UTR-3UTR CAA 90 bp CATCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTCTAATTTTCCTTCCTaGAGGAGATCTGGATCGATT +
Preference number: 3 (lower is better)
Translates to: HPSPLGYYVISHGHCLEVSNFPS*RRSGSI
Trigger: AATCGATCCAGATCTCCTCAAGGAAGGAAAATTAGA...GACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTACAATCATTTTAGAATaGTTGAAGGAGTCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: RAIAALKYLGQCEPAMISTIILE*LKESGE
Trigger: CTCCCCAGACTCCTTCAACAATTCTAAAATGATTGT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTGCTTTTACTTCTTTaGGTGCCTGGTAAGTTGATC +
Preference number: 3 (lower is better)
Translates to: RAIAALKYLGQCEPAMISLLLLL*VPGKLI
Trigger: GATCAACTTACCAGGCACCAAAAGAAGTAAAAGCAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGGCATCAACCAAGATTaGGTGAAGAAAGGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: RAIAALKYLGQCEPAMISGINQD*VKKGFL
Trigger: AAGAAAACCTTTCTTCACCAAATCTTGGTTGATGCC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
3UTR-3UTR CAA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGGGCATCAACCAAGATTaGGTGAAGAAAGGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLGINQD*VKKGFL
Trigger: AAGAAAACCTTTCTTCACCAAATCTTGGTTGATGCC...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622294.2
3UTR-3UTR CAA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGAATGGGTGGATCTGGTaGCACTATTTCATCAACAGA +
Preference number: 3 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQNGWIW*HYFINR
Trigger: TCTGTTGATGAAATAGTGCAACCAGATCCACCCATT...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
3UTR-3UTR CAA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGTGTATGTCATTGGCATaGAAATCAGTCTCCAGAATG +
Preference number: 3 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLCMSLA*KSVSRM
Trigger: CATTCTGGAGACTGATTTCAATGCCAATGACATACA...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR TCA 72 bp AAGAACACAGTCTTTGAAGCTAGCTGGATTTCAGTTTaGATCCCAGCTGTGCAACTTGCTAGTAATGTTACA +
Preference number: 3 (lower is better)
Translates to: KNTVFEASWISV*IPAVQLASNVT
Trigger: TGTAACATTACTAGCAAGTTGCACAGCTGGGATTCAAACTGAAATCCAGCTAGCTTCAAAGACTGTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513671.5
3UTR GCA 72 bp TTGAAGCTAGCTGGATTTCAGTTTGAATCCCAGCTGTaGAACTTGCTAGTAATGTTACATAAGTTCTCTAAG +
Preference number: 3 (lower is better)
Translates to: LKLAGFQFESQL*NLLVMLHKFSK
Trigger: CTTAGAGAACTTATGTAACATTACTAGCAAGTTGCACAGCTGGGATTCAAACTGAAATCCAGCTAGCTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513671.5
3UTR CCA 72 bp CATCACTGTGGAATTCGGGTTTATAGCTATCATGAATaGCTAAGATTGTGTTCACCTCCTCTAATTTTCCTT +
Preference number: 3 (lower is better)
Translates to: HHCGIRVYSYHE*LRLCSPPLIFL
Trigger: AAGGAAAATTAGAGGAGGTGAACACAATCTTAGCCATTCATGATAGCTATAAACCCGAATTCCACAGTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR CCA 90 bp TCTGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCACACCGCACTCTAGCCTaGCGACAGAGCGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: SGTGISEPGTCSPVPGLPHRTLA*RQSETL
Trigger: CAGAGTCTCGCTCTGTCGCCAGGCTAGAGTGCGGTG...TGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGGGTCACGCCGCGCCTaGCCCGCAGTCCCCCAGATC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPGSRRA*PAVPQI
Trigger: GATCTGGGGGACTGCGGGCCAGGCGCGGCGTGACCC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACCCATGGCTGCGCCCTaGTTGGCAGCTCGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPPMAAP*LAARGL
Trigger: CAGCCCGCGAGCTGCCAAGCAGGGCGCAGCCATGGG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACGCCACTGTAGCAGCTaGTGCTGCCGCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPRHCSS*CCRCRR
Trigger: GCGGCGGCAGCGGCAGCAGCAGCTGCTACAGTGGCG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR GCA 90 bp TGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCGAGGAGCCACAGGGATaGACTTTTTGGCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: WDRHLRTWNMFSCPRPPSEEPQG*TFWHLP
Trigger: AGGCAGATGCCAAAAAGTGCATCCCTGTGGCTCCTC...GCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGCGGGCTGTCAGGCTTaGGGAGGAGAGAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPAGCQA*GGERGR
Trigger: CCGCCCCCTCTCTCCTCCCCAAGCCTGACAGCCCGC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGGTTCGCGTCTGCGCTaGGGCCAATGGTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPGSRLR*GQWCRG
Trigger: GCCCCGGCACCATTGGCCCCAGCGCAGACGCGAACC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR TCA 90 bp CAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCAGCAGTCAGTAAAGTCCAGTTaGGGGCAATGGGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: QASQNLEHVLLSQASQQQSVKSS*GQWVDL
Trigger: CAGATCCACCCATTGCCCTCAACTGGACTTTACTGA...CTGCTGCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp TCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTGGGGACTGTACTTGGCTGAGCAACCTCTaGGGTACCCTCATGTATGTC +
Preference number: 4 (lower is better)
Translates to: SGKGKAVALSMRPCGDCTWLSNL*GTLMYV
Trigger: GACATACATGAGGGTACCTCAGAGGTTGCTCAGCCA...AGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp TCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTGGGGACTGTACTTTTAACCTCTGTGGCTaGGCAACCTCTGAGGTACCC +
Preference number: 4 (lower is better)
Translates to: SGKGKAVALSMRPCGDCTFNLCG*ATSEVP
Trigger: GGGTACCTCAGAGGTTGCTCAGCCACAGAGGTTAAA...AGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGCGGAGAGGCCGAGTaGCGCCCGGGCCAAGCATTC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPCGEAE*RPGQAF
Trigger: GAATGCTTGGCCCGGGCGGCACTCGGCCTCTCCGCA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR GCA 90 bp TGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCTCTGCTAAGGATAGCTaGTGTGGCCTCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: WDRHLRTWNMFSCPRPPSSAKDS*CGLTSR
Trigger: TCTGGAAGTGAGGCCACAGCAGCTATCCTTAGCAGA...GCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp TGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCACATTGGGACATCCCTaGCTTATTCTTTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: WDRHLRTWNMFSCPRPPSTLGHP*LILLAR
Trigger: CCGGGCCAAAAGAATAAGGCAGGGATGTCCCAATGT...GCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp TCTGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGAGGAGCCACAGGGATaGACTTTTTGGCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: SGTGISEPGTCSPVPGLPEEPQG*TFWHLP
Trigger: AGGCAGATGCCAAAAAGTGCATCCCTGTGGCTCCTC...TGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACCCCAGTTCCATCGGTaGCAACGTGCGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPPQFHR*QRAAAA
Trigger: GGCCGCAGCCGCACGTTGGCACCGATGGAACTGGGG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS-3UTR CCA 90 bp TCTGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGACCACACTACCTGCTaGTGTAATGTCGCTCACCTG +
Preference number: 4 (lower is better)
Translates to: SGTGISEPGTCSPVPGLPDHTTC*CNVAHL
Trigger: CAGGTGAGCGACATTACACCAGCAGGTAGTGTGGTC...TGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp CAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCAGCAGGGGTGCATGTCACATTaGGACATCCCTGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: QASQNLEHVLLSQASQQQGCMSH*DIPALF
Trigger: GAATAAGGCAGGGATGTCCCAATGTGACATGCACCC...CTGCTGCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp TCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTGGGGACTGTACTATATGGGCAGCTTGGTaGGTTGACTCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SGKGKAVALSMRPCGDCTIWAAW*VDSAPS
Trigger: TGAAGGAGCTGAGTCAACTCACCAAGCTGCCCATAT...AGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGCGCGGGTTCGCGTCTaGGCTGGGGCCAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISARVRV*AGANGA
Trigger: GGCACCATTGGCCCCAGCGCAGACGCGAACCCGCGC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR GCA 90 bp CTTTCTAATCTCAGAGCCTTGGTAGGTAGGGGTAGTATGCAGCAGCAGAAAGAACCATCGGTGCCAACGTaGGGCTGCGGCCCGCACAAA +
Preference number: 4 (lower is better)
Translates to: LSNLRALVGRGSMQQQKEPSVPT*GCGPHK
Trigger: TTTGTGCGGGCCGCAGCCGCACGTTGGCACCGATGG...TTCTTTCTGCTGCTGCATACTACCCCTACCTACCAAGGCTCTGAGATTAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACCATCGGTGCCAACGTaGGGCTGCGGCCCGCACAAA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPPSVPT*GCGPHK
Trigger: TTTGTGCGGGCCGCAGCCGCACGTTGGCACCGATGG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS-3UTR GCA 90 bp CAGTCTTTGAAGCTAGCTGGATTTCAGTTTGAATCCCAGCTGTGCAACTTGCTACCCCAGTTCCATCGGTaGCAACGTGCGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: QSLKLAGFQFESQLCNLLPQFHR*QRAAAA
Trigger: GGCCGCAGCCGCACGTTGGCACCGATGGAACTGGGG...TAGCAAGTTGCACAGCTGGGATTCAAACTGAAATCCAGCTAGCTTCAAAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAAAGACCGCGCGCTCTaGGCGCTGTGTCCACGCGCA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPKDRAL*ALCPRA
Trigger: TGCGCGTGGACACAGCGCGCAGAGCGCGCGGTCTTT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS-3UTR CCA 90 bp TGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCCAGGGATGCACTTTTTaGCATCTGCCTCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: WDRHLRTWNMFSCPRPPSQGCTF*HLPHRS
Trigger: ACTTCTGTGAGGCAGATGCCAAAAAGTGCATCCCTG...GCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
3UTR CAA 72 bp GTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTaGGCCCGGGGAAAGGACCACACTACCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VHVTLGHPCLIL*ARGKDHTTCWC
Trigger: ACACCAGCAGGTAGTGTGGTCCTTTCCCCGGGCCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCCGAGCTTCGCCTCTaGTCAGAGAGCGCGGGTTCG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSELRL*SESAGS
Trigger: CGAACCCGCGCTCTCTGATCAGAGGCGAAGCTCGGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR TCA 90 bp TCTGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCACATAGAGCACCTCACTaGACTCGCCATAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: SGTGISEPGTCSPVPGLPHRAPH*TRHNFQ
Trigger: CTGGAAATTATGGCGAGTTCAGTGAGGTGCTCTATG...TGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp CAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCGGCAGCTTGGTGAGTTaGCTCAGCTCCTTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: QSETISGCMSHWDIPALFGSLVS*LSSFSR
Trigger: CCTACTGAAGGAGCTGAGTCAACTCACCAAGCTGCC...GAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGGCACGGGAATCGCCTaGACCTGTGGGAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPGTGIA*TCGRWR
Trigger: TCTCCACCTCCCACAGGTTCAGGCGATTCCCGTGCC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACAGTTCGAGAACTGCTaGGGAGAGGCCGAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPQFENC*GEAECR
Trigger: GCGGCACTCGGCCTCTCCGCAGCAGTTCTCGAACTG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCCTCTTCCCATGGCTaGGCCCTGCTTGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSSSHG*ALLGSS
Trigger: CGAGCTGCCAAGCAGGGCGCAGCCATGGGAAGAGGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR GCA 90 bp TCTGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTA +
Preference number: 4 (lower is better)
Translates to: SGTGISEPGTCSPVPGLPKVNSS*QRSIPV
Trigger: TACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTT...TGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGTGCCAACGTGCGGCTaGGGCCCGCACAAACGCGCA +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISVPTCG*GPHKRA
Trigger: TGCGCGTTTGTGCGGGCCGCAGCCGCACGTTGGCAC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACTCCTCCTCTTCCCATaGCTGCGCCCTGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPLLLFP*LRPAWQ
Trigger: CTGCCAAGCAGGGCGCAGCCATGGGAAGAGGAGGAG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR CCA 90 bp CACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCACCCCTAGGTTACTATGTGCCTGCCTTATTCTTTTaGCCCGGGGAAAGGACCACA +
Preference number: 4 (lower is better)
Translates to: HNSWYVQSRHPSPLGYYVPALFF*PGERTT
Trigger: TGTGGTCCTTTCCCCGGGCCAAAAGAATAAGGCAGG...CACATAGTAACCTAGGGGTGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp TCTGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAAATGGAGGTATAGTCTaGGACAGGCATCTCAGAACC +
Preference number: 4 (lower is better)
Translates to: SGTGISEPGTCSPVPGLPNGGIV*DRHLRT
Trigger: GGTTCTGAGATGCCTGTCCCAGACTATACCTCCATT...TGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp CACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCACCCCTAGGTTACTATGTGAATCGCCTGAACCTGTaGGAGGTGGAGATTGCAGTG +
Preference number: 4 (lower is better)
Translates to: HNSWYVQSRHPSPLGYYVNRLNL*EVEIAV
Trigger: CACTGCAATCTCCACCTCCCACAGGTTCAGGCGATT...CACATAGTAACCTAGGGGTGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCCGAGTTGCTGGGATaGAGTCTTCCCGGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSELLG*SLPGEE
Trigger: CTCCTCGCCGGGAAGACTTCATCCCAGCAACTCGGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR TCA 90 bp CACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCACCCCTAGGTTACTATGTGGTTTTCTTGGCAGAGTaGGACCATTTCCGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: HNSWYVQSRHPSPLGYYVVFLAE*DHFRVH
Trigger: ATGCACCCGGAAATGGTCTCACTCTGCCAAGAAAAC...CACATAGTAACCTAGGGGTGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp CCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTGGCACGGGAATCGCCTaGACCTGTGGGAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PSPLGYYVISHGHCLEVCGTGIA*TCGRWR
Trigger: TCTCCACCTCCCACAGGTTCAGGCGATTCCCGTGCC...ACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR GCA 90 bp CAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCAGCAGTGGTTTGTTTTTCTCTaGTTGGATAACACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QASQNLEHVLLSQASQQQWFVFL*LDNTGL
Trigger: CAGCCCAGTGTTATCCAAGCAGAGAAAAACAAACCA...CTGCTGCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp TGGCAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTAACATTGGGACATCCCTaGCTTATTCTTTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: WQSETISGCMSHWDIPALTLGHP*LILLAR
Trigger: CCGGGCCAAAAGAATAAGGCAGGGATGTCCCAATGT...TAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp TCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTGGGGACTGTACTGCACTTTTTGGCATCTaGCTCACAGAAGTAGGCATT +
Preference number: 4 (lower is better)
Translates to: SGKGKAVALSMRPCGDCTALFGI*LTEVGI
Trigger: AATGCCTACTTCTGTGAGGCAGATGCCAAAAAGTGC...AGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAAAGACCGCGCGCTCTaGGCGCTGTGTCCACGCGCA +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISKDRAL*ALCPRA
Trigger: TGCGCGTGGACACAGCGCGCAGAGCGCGCGGTCTTT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS-3UTR CCA 90 bp TCTGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCACTTTGGAACTGGAACTaGGGGCAGAATCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: SGTGISEPGTCSPVPGLPLWNWN*GQNQHF
Trigger: AAAATGCTGATTCTGCCCCCAGTTCCAGTTCCAAAG...TGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR CCA 90 bp CAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCGACCACACTACCTGCTaGTGTAATGTCGCTCACCTG +
Preference number: 4 (lower is better)
Translates to: QSETISGCMSHWDIPALFDHTTC*CNVAHL
Trigger: CAGGTGAGCGACATTACACCAGCAGGTAGTGTGGTC...GAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACACCGCACTCTAGCCTaGCGACAGAGCGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPHRTLA*RQSETL
Trigger: CAGAGTCTCGCTCTGTCGCCAGGCTAGAGTGCGGTG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp TCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTGGGGACTGTACTGAATCCCAGTTAAACTaGCGTTCAGTAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SGKGKAVALSMRPCGDCTESQLN*RSVKSS
Trigger: ACTGGACTTTACTGAACGTCAGTTTAACTGGGATTC...AGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACATAACACTGGGCTGCTaGGTAGCAGGGCAAGCATCA +
Preference number: 4 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDITLGC*VAGQAS
Trigger: TGATGCTTGCCCTGCTACTCAGCAGCCCAGTGTTAT...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp CAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCAGCAGAGTGTGAACCAGCTATaGTTTCTACTTCTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: QASQNLEHVLLSQASQQQSVNQL*FLLLLA
Trigger: TGCTAAGAGAAGTAGAAATCATAGCTGGTTCACACT...CTGCTGCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAGGTGGAGATTGCAGTaGGTCAAGATCGCGCCACCG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPRWRLQ*VKIAPP
Trigger: CGGTGGCGCGATCTTGACTCACTGCAATCTCCACCT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CTTTCTAATCTCAGAGCCTTGGTAGGTAGGGGTAGTATGCAGCAGCAGAAAGAATGGCTGTCACTCTACTaGCCCCAGTTCCATCGGTGC +
Preference number: 4 (lower is better)
Translates to: LSNLRALVGRGSMQQQKEWLSLY*PQFHRC
Trigger: GCACCGATGGAACTGGGGTCAGTAGAGTGACAGCCA...TTCTTTCTGCTGCTGCATACTACCCCTACCTACCAAGGCTCTGAGATTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGGCTGTCACTCTACTaGCCCCAGTTCCATCGGTGC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPWLSLY*PQFHRC
Trigger: GCACCGATGGAACTGGGGTCAGTAGAGTGACAGCCA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGGCCAGTTCGAGAACTaGTGCGGAGAGGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISGQFEN*CGEAEC
Trigger: GCACTCGGCCTCTCCGCAGCAGTTCTCGAACTGGCC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR GCA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACTTGCAGACTCCAGGGTaGTCTGCTAAGGATAGCTGC +
Preference number: 4 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDLQTPG*SAKDSC
Trigger: GCAGCTATCCTTAGCAGAGCACCCTGGAGTCTGCAA...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CCCATCCTGCTTTCTAATCTCAGAGCCTTGGTAGGTAGGGGTAGTATGCAGCAGCCTGGATTAACACTTTaGAGACTCCAGGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PILLSNLRALVGRGSMQQPGLTL*RLQGAL
Trigger: CAGAGCACCCTGGAGTCTGCAAAGTGTTAATCCAGG...CTGCTGCATACTACCCCTACCTACCAAGGCTCTGAGATTAGAAAGCAGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR GCA 90 bp CAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCAAGGACCACACTACCTaGTGGTGTAATGTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: QSETISGCMSHWDIPALFKDHTT*WCNVAH
Trigger: GTGAGCGACATTACACCAGCAGGTAGTGTGGTCCTT...GAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTATGGGAGGGCAGGGGTaGGAAAAGGCGGCCACCGTT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISMGGQG*EKAATV
Trigger: AACGGTGGCCGCCTTTTCCCACCCCTGCCCTCCCAT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR CCA 90 bp TCTGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCACAGAGTTTCGTTGTTTaGATCTCACACGCACTTCAT +
Preference number: 4 (lower is better)
Translates to: SGTGISEPGTCSPVPGLPQSFVV*ISHALH
Trigger: ATGAAGTGCGTGTGAGATCCAAACAACGAAACTCTG...TGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp GAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTGGCCTGCCTTATTCTTTTaGCCCGGGGAAAGGACCACA +
Preference number: 4 (lower is better)
Translates to: ETISGCMSHWDIPALFFWPALFF*PGERTT
Trigger: TGTGGTCCTTTCCCCGGGCCAAAAGAATAAGGCAGG...CCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGGCAGCTTGGTGAGTTaGCTCAGCTCCTTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPGSLVS*LSSFSR
Trigger: CCTACTGAAGGAGCTGAGTCAACTCACCAAGCTGCC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCCCCCAGATCCAGGTTaGAGAAGCGAAGGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISPPDPG*RSEGEA
Trigger: CGCTTCGCCTTCGCTTCTGCAACCTGGATCTGGGGG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR GCA 90 bp TCTAATCTCAGAGCCTTGGTAGGTAGGGGTAGTATGCAGCAGCAGAAAGAACACTTGCAGACTCCAGGGTaGTCTGCTAAGGATAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNLRALVGRGSMQQQKEHLQTPG*SAKDSC
Trigger: GCAGCTATCCTTAGCAGAGCACCCTGGAGTCTGCAA...GTGTTCTTTCTGCTGCTGCATACTACCCCTACCTACCAAGGCTCTGAGATTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR GCA 90 bp TCTCCAGAATGTCAGGTTCACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCAATCTGCATTGCGTGGTaGTTCCCATCTCACTTGGAT +
Preference number: 4 (lower is better)
Translates to: SPECQVHNSWYVQSRHPSICIAW*FPSHLD
Trigger: ATCCAAGTGAGATGGGAAGCACCACGCAATGCAGAT...TGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTGAACCTGACATTCTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACGAGACCATTTCCGGGTaGATGTCACATTGGGACATC +
Preference number: 4 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDETISG*MSHWDI
Trigger: GATGTCCCAATGTGACATGCACCCGGAAATGGTCTC...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp TGGCAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATGTTCAGTTGGTCTGTaGTCACATAGCCACATGATG +
Preference number: 4 (lower is better)
Translates to: WQSETISGCMSHWDIPALCSVGL*SHSHMM
Trigger: CATCATGTGGCTATGTGAGCACAGACCAACTGAACA...TAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGTGGGAGGTGGAGATTaGAGTGAGTCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPVGGGD*SESRSR
Trigger: GCGCGATCTTGACTCACTGCAATCTCCACCTCCCAC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGGACTCCCTGGGTCTaGCAATCCAAAGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPWTPWV*QSKEVT
Trigger: GGTCACCTCTTTGGATTGGCAGACCCAGGGAGTCCA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGCGAGGAGCTGGAGTTaGTGCGTGTCACTCTCAACT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPARSWS*CVSLST
Trigger: AGTTGAGAGTGACACGCACCAACTCCAGCTCCTCGC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTCCCGGCGAGGAGCTaGAGTTGGTGCGTGTCACTC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISFPARS*SWCVSL
Trigger: GAGTGACACGCACCAACTCCAGCTCCTCGCCGGGAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR CCA 90 bp CAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCCAGGGATGCACTTTTTaGCATCTGCCTCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: QSETISGCMSHWDIPALFQGCTF*HLPHRS
Trigger: ACTTCTGTGAGGCAGATGCCAAAAAGTGCATCCCTG...GAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACAAAATTAGCCTGGCATaGTGGTGCGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDKISLA*WCVPVV
Trigger: GACTACAGGCACGCACCACCATGCCAGGCTAATTTT...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGCCCAGTACATCTCTaGGCTCTGCCTGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPCPVHL*ALPAEL
Trigger: CAGTTCAGCAGGCAGAGCCCAGAGATGTACTGGGCA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618088.4
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGGCTGAGCAACCTCTaGGGTACCCTCATGTATGTC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPWLSNL*GTLMYV
Trigger: GACATACATGAGGGTACCTCAGAGGTTGCTCAGCCA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTTAACCTCTGTGGCTaGGCAACCTCTGAGGTACCC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPFNLCG*ATSEVP
Trigger: GGGTACCTCAGAGGTTGCTCAGCCACAGAGGTTAAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAATAACACTGGGCTGCTaGGTAGCAGGGCAAGCATCA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPITLGC*VAGQAS
Trigger: TGATGCTTGCCCTGCTACTCAGCAGCCCAGTGTTAT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGATTCAACCTTGATGTaGGGAGCCACAGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPDSTLM*GATGMH
Trigger: GTGCATCCCTGTGGCTCCTCACATCAAGGTTGAATC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTGTGTGATTCAACCTTaGTGTGAGGAGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: SETISGCMSHWDIPALFFCVIQP*CEEPQG
Trigger: TCCCTGTGGCTCCTCACATCAAGGTTGAATCACACA...AAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGAGGTGGAGATTGCAGTaGGTCAAGATCGCGCCACCG +
Preference number: 4 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLRWRLQ*VKIAPP
Trigger: CGGTGGCGCGATCTTGACTCACTGCAATCTCCACCT...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGGCTGTCACTCTACTaGCCCCAGTTCCATCGGTGC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISWLSLY*PQFHRC
Trigger: GCACCGATGGAACTGGGGTCAGTAGAGTGACAGCCA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACCAAGCATTCCGAGTTaGTGGGATGAAGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPPSIPS*WDEVFP
Trigger: CGGGAAGACTTCATCCCAGCAACTCGGAATGCTTGG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR GCA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTA +
Preference number: 4 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDKVNSS*QRSIPV
Trigger: TACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTT...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTGCAGACTCCAGGGTaGTCTGCTAAGGATAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPLQTPG*SAKDSC
Trigger: GCAGCTATCCTTAGCAGAGCACCCTGGAGTCTGCAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTCTGAATATCTGCATTaGGTGGTGCTTCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: QSETISGCMSHWDIPALFSEYLH*VVLPIS
Trigger: TGAGATGGGAAGCACCACGCAATGCAGATATTCAGA...GAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCACCCCTAGGTTACTATGTGTGGTTTGTTTTTCTCTaGTTGGATAACACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HNSWYVQSRHPSPLGYYVWFVFL*LDNTGL
Trigger: CAGCCCAGTGTTATCCAAGCAGAGAAAAACAAACCA...CACATAGTAACCTAGGGGTGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGAGGAGCCACAGGGATaGACTTTTTGGCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPEEPQG*TFWHLP
Trigger: AGGCAGATGCCAAAAAGTGCATCCCTGTGGCTCCTC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp TGGCAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTTAATCTTTGGAACTaGAACTGGGGGCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: WQSETISGCMSHWDIPALFNLWN*NWGQNQ
Trigger: CTGATTCTGCCCCCAGTTCCAGTTCCAAAGATTAAA...TAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR CCA 90 bp TCTCCAGAATGTCAGGTTCACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCAGATTCCTTTAATCTTTaGAACTGGAACTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPECQVHNSWYVQSRHPSDSFNL*NWNWGQ
Trigger: CTGCCCCCAGTTCCAGTTCCAAAGATTAAAGGAATC...TGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTGAACCTGACATTCTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACAGGTTCACAACAGCTaGTACGTCCAGAGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPQVHNS*YVQSRH
Trigger: ATGGCGACTCTGGACGTACCAGCTGTTGTGAACCTG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGACCACACTACCTGCTaGTGTAATGTCGCTCACCTG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPDHTTC*CNVAHL
Trigger: CAGGTGAGCGACATTACACCAGCAGGTAGTGTGGTC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACCTGCCTTATTCTTTTaGCCCGGGGAAAGGACCACA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPPALFF*PGERTT
Trigger: TGTGGTCCTTTCCCCGGGCCAAAAGAATAAGGCAGG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAATCGCCTGAACCTGTaGGAGGTGGAGATTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPNRLNL*EVEIAV
Trigger: CACTGCAATCTCCACCTCCCACAGGTTCAGGCGATT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCAGAGGAGCAAGGCTaGAGATCTCAACAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSEEQG*RSQQGV
Trigger: CACCCCTTGTTGAGATCTCCAGCCTTGCTCCTCTGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAGTCTCTCGCTCAGGTaGACGGCACTTGGTGAATTT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSLSLR*TALGEF
Trigger: AAATTCACCAAGTGCCGTTCACCTGAGCGAGAGACT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAATCTGTCCAGTGGCATaGAAAAGTCTCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPICPVA*KSLSLR
Trigger: CCTGAGCGAGAGACTTTTTCATGCCACTGGACAGAT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCAGTAAAGTCCAGTTaGGGGCAATGGGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSVKSS*GQWVDL
Trigger: CAGATCCACCCATTGCCCTCAACTGGACTTTACTGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp TCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTGGCTGAGCAACCTCTaGGGTACCCTCATGTATGTC +
Preference number: 4 (lower is better)
Translates to: SFTPRLLCDFSWSLLRSLWLSNL*GTLMYV
Trigger: GACATACATGAGGGTACCTCAGAGGTTGCTCAGCCA...CAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGGCAGCTTGGTGAGTTaGCTCAGCTCCTTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISGSLVS*LSSFSR
Trigger: CCTACTGAAGGAGCTGAGTCAACTCACCAAGCTGCC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAATATGGGCAGCTTGGTaGGTTGACTCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPIWAAW*VDSAPS
Trigger: TGAAGGAGCTGAGTCAACTCACCAAGCTGCCCATAT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGTTTTCTTGGCAGAGTaGGACCATTTCCGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPVFLAE*DHFRVH
Trigger: ATGCACCCGGAAATGGTCTCACTCTGCCAAGAAAAC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTGATTCAACCTTGATGTaGGGAGCCACAGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: PSPLGYYVISHGHCLEVCDSTLM*GATGMH
Trigger: GTGCATCCCTGTGGCTCCTCACATCAAGGTTGAATC...ACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGTGTGATTCAACCTTaGTGTGAGGAGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPCVIQP*CEEPQG
Trigger: TCCCTGTGGCTCCTCACATCAAGGTTGAATCACACA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCTGAATGCTTGCTTTaGGGCCAGTCCACTCAGAGA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSECLL*GQSTQR
Trigger: TCTCTGAGTGGACTGGCCTCAAAGCAAGCATTCAGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACAATGCTCTCAAGAATaGTGTTTAGGGCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPQCSQE*CLGLGT
Trigger: CGTGCCCAGCCCTAAACATCATTCTTGAGAGCATTG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCTGCTAAGGATAGCTaGTGTGGCCTCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSAKDS*CGLTSR
Trigger: TCTGGAAGTGAGGCCACAGCAGCTATCCTTAGCAGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACCTGGATTAACACTTTaGAGACTCCAGGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPPGLTL*RLQGAL
Trigger: CAGAGCACCCTGGAGTCTGCAAAGTGTTAATCCAGG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTaGTTAGAAGTCTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HNSWYVQSRHPSPLGYYVISHGH*LEVCLC
Trigger: ACACAGACAGACTTCTAAGCAGTGACCATGAGAAAT...CACATAGTAACCTAGGGGTGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAAGGACCACACTACCTaGTGGTGTAATGTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPKDHTT*WCNVAH
Trigger: GTGAGCGACATTACACCAGCAGGTAGTGTGGTCCTT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAACATTGGGACATCCCTaGCTTATTCTTTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPTLGHP*LILLAR
Trigger: CCGGGCCAAAAGAATAAGGCAGGGATGTCCCAATGT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGAGACCATTTCCGGGTaGATGTCACATTGGGACATC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPETISG*MSHWDI
Trigger: GATGTCCCAATGTGACATGCACCCGGAAATGGTCTC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCTTGCCTGTGGACTTaGACCCAGAAGGCACTTGTA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSCLWT*TQKALV
Trigger: TACAAGTGCCTTCTGGGTGCAAGTCCACAGGCAAGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCACCTCTGGCCCTGCTaGCTCCTATACTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISHLWPC*LLYSSH
Trigger: GTGAGAAGAGTATAGGAGGCAGCAGGGCCAGAGGTG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612626.4
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAGCATTCCGAGTTGCTaGGATGAAGTCTTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSIPSC*DEVFPA
Trigger: CGCCGGGAAGACTTCATCCCAGCAACTCGGAATGCT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR CCA 90 bp AGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTGTTGAGGGCAATGGGTaGATCTGGTTGCACTATTTC +
Preference number: 4 (lower is better)
Translates to: SETISGCMSHWDIPALFFVEGNG*IWLHYF
Trigger: GAAATAGTGCAACCAGATCCACCCATTGCCCTCAAC...AAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGGGTGCATGTCACATTaGGACATCCCTGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPGCMSH*DIPALF
Trigger: GAATAAGGCAGGGATGTCCCAATGTGACATGCACCC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAAAATTAGCCTGGCATaGTGGTGCGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPKISLA*WCVPVV
Trigger: GACTACAGGCACGCACCACCATGCCAGGCTAATTTT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGGGAGGGGTTGGAGGTaGGATCCCACAGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISGRGWR*DPTEVS
Trigger: AGAAACTTCTGTGGGATCCCACCTCCAACCCCTCCC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGGCTATTCACACCTCTaGCCCTGCTGCCTCCTATAC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISGYSHL*PCCLLY
Trigger: GTATAGGAGGCAGCAGGGCCAGAGGTGTGAATAGCC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612626.4
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACTTCTCAGAAGGTTCTaGGCTATTCACACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPLLRRF*AIHTSG
Trigger: GCCAGAGGTGTGAATAGCCCAGAACCTTCTGAGAAG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612626.4
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACATACCTGTAGGACCTaGTTATCAGAGGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPHTCRT*LSEEQG
Trigger: GCCTTGCTCCTCTGATAACCAGGTCCTACAGGTATG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAGAAAAAGCATCACTTaGTCCTGCCAGTGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPRKSIT*SCQCQG
Trigger: ACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTCT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACATAGAGCACCTCACTaGACTCGCCATAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPHRAPH*TRHNFQ
Trigger: CTGGAAATTATGGCGAGTTCAGTGAGGTGCTCTATG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp TCTCCAGAATGTCAGGTTCACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCAGTATGTCATTGGCATTaGAATCAGTCTCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: SPECQVHNSWYVQSRHPSVCHWH*NQSPEC
Trigger: ACATTCTGGAGACTGATTTCAATGCCAATGACATAC...TGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTGAACCTGACATTCTGGAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGGCTGAGCAACCTCTaGGGTACCCTCATGTATGTC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISWLSNL*GTLMYV
Trigger: GACATACATGAGGGTACCTCAGAGGTTGCTCAGCCA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTTAACCTCTGTGGCTaGGCAACCTCTGAGGTACCC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISFNLCG*ATSEVP
Trigger: GGGTACCTCAGAGGTTGCTCAGCCACAGAGGTTAAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGTTTAACCTCTGTGGCTaGGCAACCTCTGAGGTACCC +
Preference number: 4 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLFNLCG*ATSEVP
Trigger: GGGTACCTCAGAGGTTGCTCAGCCACAGAGGTTAAA...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTATAACACTGGGCTGCTaGGTAGCAGGGCAAGCATCA +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISITLGC*VAGQAS
Trigger: TGATGCTTGCCCTGCTACTCAGCAGCCCAGTGTTAT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGGGCAGCTTGGTGAGTTaGCTCAGCTCCTTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQGSLVS*LSSFSR
Trigger: CCTACTGAAGGAGCTGAGTCAACTCACCAAGCTGCC...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGATTCAACCTTGATGTaGGGAGCCACAGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISDSTLM*GATGMH
Trigger: GTGCATCCCTGTGGCTCCTCACATCAAGGTTGAATC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGCTTGGCTGTATGTGTaGTTCAACCTTGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPAWLYV*FNLDVR
Trigger: CCTCACATCAAGGTTGAATCACACATACAGCCAAGC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp TCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTCTGAATGCTTGCTTTaGGGCCAGTCCACTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SFTPRLLCDFSWSLLRSLSECLL*GQSTQR
Trigger: TCTCTGAGTGGACTGGCCTCAAAGCAAGCATTCAGA...CAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGCCAATCCAAAGAGGTaGCCTTGGTCATGGAAGATT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPANPKR*PWSWKI
Trigger: AATCTTCCATGACCAAGGTCACCTCTTTGGATTGGC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGATTTGGTTAAAATCTaGCAGAGAGGGAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPDLVKI*QRGRGW
Trigger: CCAACCCCTCCCTCTCTGTCAGATTTTAACCAAATC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPKVNSS*QRSIPV
Trigger: TACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTGCAGACTCCAGGGTaGTCTGCTAAGGATAGCTGC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISLQTPG*SAKDSC
Trigger: GCAGCTATCCTTAGCAGAGCACCCTGGAGTCTGCAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp TCACCTGGGCATAAAAGTCGATGTTTGACAGTGAACTTGGATTGCTTAGCTGAATTGCAGACTCCAGGGTaGTCTGCTAAGGATAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPGHKSRCLTVNLDCLAELQTPG*SAKDSC
Trigger: GCAGCTATCCTTAGCAGAGCACCCTGGAGTCTGCAA...TTCAGCTAAGCAATCCAAGTTCACTGTCAAACATCGACTTTTATGCCCAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTCCTGGATTAACACTTTaGAGACTCCAGGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PSPLGYYVISHGHCLEVCPGLTL*RLQGAL
Trigger: CAGAGCACCCTGGAGTCTGCAAAGTGTTAATCCAGG...ACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAATCTGCATTGCGTGGTaGTTCCCATCTCACTTGGAT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPICIAW*FPSHLD
Trigger: ATCCAAGTGAGATGGGAAGCACCACGCAATGCAGAT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGAGGAGCCACAGGGATaGACTTTTTGGCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISEEPQG*TFWHLP
Trigger: AGGCAGATGCCAAAAAGTGCATCCCTGTGGCTCCTC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp TCTCCAGAATGTCAGGTTCACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCATGGCTTAAACGTTATTaGCCCAGTCAATTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SPECQVHNSWYVQSRHPSWLKRY*PSQFFA
Trigger: AGCAAAGAATTGACTGGGGCAATAACGTTTAAGCCA...TGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTGAACCTGACATTCTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGGTGGGAGGTGGAGATTaGAGTGAGTCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQVGGGD*SESRSR
Trigger: GCGCGATCTTGACTCACTGCAATCTCCACCTCCCAC...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAACCTCATCTGTCCAGTaGCATGAAAAAGTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPTSSVQ*HEKVSR
Trigger: GCGAGAGACTTTTTCATGCCACTGGACAGATGAGGT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGTTGAGGGCAATGGGTaGATCTGGTTGCACTATTTC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPVEGNG*IWLHYF
Trigger: GAAATAGTGCAACCAGATCCACCCATTGCCCTCAAC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp ATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTGGTACAGGTTCACAACAGCTaGTACGTCCAGAGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: MSLALKSVSRMSGSQQLVQVHNS*YVQSRH
Trigger: ATGGCGACTCTGGACGTACCAGCTGTTGTGAACCTG...TACCAGCTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp TCACCTGGGCATAAAAGTCGATGTTTGACAGTGAACTTGGATTGCTTAGCTGAACAGGTTCACAACAGCTaGTACGTCCAGAGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: SPGHKSRCLTVNLDCLAEQVHNS*YVQSRH
Trigger: ATGGCGACTCTGGACGTACCAGCTGTTGTGAACCTG...TTCAGCTAAGCAATCCAAGTTCACTGTCAAACATCGACTTTTATGCCCAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp CAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCAGTAGGAAGTGGTTGTaGTTTGTTTTTCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QSETISGCMSHWDIPALFSRKWL*FVFLCL
Trigger: CAAGCAGAGAAAAACAAACCACAACCACTTCCTACT...GAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGACCACACTACCTGCTaGTGTAATGTCGCTCACCTG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISDHTTC*CNVAHL
Trigger: CAGGTGAGCGACATTACACCAGCAGGTAGTGTGGTC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCCTGCCTTATTCTTTTaGCCCGGGGAAAGGACCACA +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISPALFF*PGERTT
Trigger: TGTGGTCCTTTCCCCGGGCCAAAAGAATAAGGCAGG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTGGGTGCATGTCACATTaGGACATCCCTGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: PSPLGYYVISHGHCLEVCGCMSH*DIPALF
Trigger: GAATAAGGCAGGGATGTCCCAATGTGACATGCACCC...ACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp CAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCATAAGGAAGTTTTCTTaGCAGAGTGAGACCATTTCC +
Preference number: 4 (lower is better)
Translates to: QSETISGCMSHWDIPALFIRKFS*QSETIS
Trigger: GGAAATGGTCTCACTCTGCCAAGAAAACTTCCTTAT...GAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACAGGGATGCACTTTTTaGCATCTGCCTCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPQGCTF*HLPHRS
Trigger: ACTTCTGTGAGGCAGATGCCAAAAAGTGCATCCCTG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAATGGAGGTATAGTCTaGGACAGGCATCTCAGAACC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPNGGIV*DRHLRT
Trigger: GGTTCTGAGATGCCTGTCCCAGACTATACCTCCATT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAACAAATCTTGCCTGTaGACTTGCACCCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPNKSCL*TCTQKA
Trigger: TGCCTTCTGGGTGCAAGTCCACAGGCAAGATTTGTT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAGTCTCTCGCTCAGGTaGACGGCACTTGGTGAATTT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSLSLR*TALGEF
Trigger: AAATTCACCAAGTGCCGTTCACCTGAGCGAGAGACT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTATCTGTCCAGTGGCATaGAAAAGTCTCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISICPVA*KSLSLR
Trigger: CCTGAGCGAGAGACTTTTTCATGCCACTGGACAGAT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCAGTAAAGTCCAGTTaGGGGCAATGGGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSVKSS*GQWVDL
Trigger: CAGATCCACCCATTGCCCTCAACTGGACTTTACTGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTACTTGGATATCTGCATaGATCCCAGTTAAACTGACG +
Preference number: 4 (lower is better)
Translates to: SETISGCMSHWDIPALFFTWISA*IPVKLT
Trigger: CGTCAGTTTAACTGGGATTCATGCAGATATCCAAGT...AAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAACCATCCATCCTTTCTaGATATCTGCATTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPTIHPF*ISALRG
Trigger: ACCACGCAATGCAGATATTCAGAAAGGATGGATGGT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTATATGGGCAGCTTGGTaGGTTGACTCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISIWAAW*VDSAPS
Trigger: TGAAGGAGCTGAGTCAACTCACCAAGCTGCCCATAT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CTCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGATTCAACCTTGATGTaGGGAGCCACAGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: LMYVIGIEISLQNVRFTTDSTLM*GATGMH
Trigger: GTGCATCCCTGTGGCTCCTCACATCAAGGTTGAATC...TGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGTGTGATTCAACCTTaGTGTGAGGAGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISCVIQP*CEEPQG
Trigger: TCCCTGTGGCTCCTCACATCAAGGTTGAATCACACA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp ATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTGGTACAATGCTCTCAAGAATaGTGTTTAGGGCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: MSLALKSVSRMSGSQQLVQCSQE*CLGLGT
Trigger: CGTGCCCAGCCCTAAACATCATTCTTGAGAGCATTG...TACCAGCTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR TCA 90 bp CTTTCTAATCTCAGAGCCTTGGTAGGTAGGGGTAGTATGCAGCAGCAGAAAGAACTTCCTTCAAGTTGGTaGGCTTCTCTACTCTGCATT +
Preference number: 4 (lower is better)
Translates to: LSNLRALVGRGSMQQQKELPSSW*ASLLCI
Trigger: AATGCAGAGTAGAGAAGCTCACCAACTTGAAGGAAG...TTCTTTCTGCTGCTGCATACTACCCCTACCTACCAAGGCTCTGAGATTAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCTGCTAAGGATAGCTaGTGTGGCCTCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSAKDS*CGLTSR
Trigger: TCTGGAAGTGAGGCCACAGCAGCTATCCTTAGCAGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp TCACCTGGGCATAAAAGTCGATGTTTGACAGTGAACTTGGATTGCTTAGCTGAATCTGCTAAGGATAGCTaGTGTGGCCTCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SPGHKSRCLTVNLDCLAESAKDS*CGLTSR
Trigger: TCTGGAAGTGAGGCCACAGCAGCTATCCTTAGCAGA...TTCAGCTAAGCAATCCAAGTTCACTGTCAAACATCGACTTTTATGCCCAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CATAAGTTCTCTAAGCTCCAGTTTTCCCGTAAGATCCTTTTGCCAAGAGCAAAGTCTGCTAAGGATAGCTaGTGTGGCCTCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HKFSKLQFSRKILLPRAKSAKDS*CGLTSR
Trigger: TCTGGAAGTGAGGCCACAGCAGCTATCCTTAGCAGA...CTTTGCTCTTGGCAAAAGGATCTTACGGGAAAACTGGAGCTTAGAGAACTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCCTGGATTAACACTTTaGAGACTCCAGGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISPGLTL*RLQGAL
Trigger: CAGAGCACCCTGGAGTCTGCAAAGTGTTAATCCAGG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCTGAATATCTGCATTaGGTGGTGCTTCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSEYLH*VVLPIS
Trigger: TGAGATGGGAAGCACCACGCAATGCAGATATTCAGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCCTTTCTGAATATCTaGATTGCGTGGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSFLNI*IAWCFP
Trigger: TGGGAAGCACCACGCAATGCAGATATTCAGAAAGGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACATTTCTCATGGTCACTaGTTAGAAGTCTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDISHGH*LEVCLC
Trigger: ACACAGACAGACTTCTAAGCAGTGACCATGAGAAAT...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAAGGACCACACTACCTaGTGGTGTAATGTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISKDHTT*WCNVAH
Trigger: GTGAGCGACATTACACCAGCAGGTAGTGTGGTCCTT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp TCACCTGGGCATAAAAGTCGATGTTTGACAGTGAACTTGGATTGCTTAGCTGAAAAGGACCACACTACCTaGTGGTGTAATGTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: SPGHKSRCLTVNLDCLAEKDHTT*WCNVAH
Trigger: GTGAGCGACATTACACCAGCAGGTAGTGTGGTCCTT...TTCAGCTAAGCAATCCAAGTTCACTGTCAAACATCGACTTTTATGCCCAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTACATTGGGACATCCCTaGCTTATTCTTTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISTLGHP*LILLAR
Trigger: CCGGGCCAAAAGAATAAGGCAGGGATGTCCCAATGT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGAGACCATTTCCGGGTaGATGTCACATTGGGACATC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISETISG*MSHWDI
Trigger: GATGTCCCAATGTGACATGCACCCGGAAATGGTCTC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGCACTTTTTGGCATCTaGCTCACAGAAGTAGGCATT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPALFGI*LTEVGI
Trigger: AATGCCTACTTCTGTGAGGCAGATGCCAAAAAGTGC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGTTCAGTTGGTCTGTaGTCACATAGCCACATGATG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPCSVGL*SHSHMM
Trigger: CATCATGTGGCTATGTGAGCACAGACCAACTGAACA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTTCTTCTGAATGCTTaGTTTGAGGCCAGTCCACTC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPFLLNA*FEASPL
Trigger: GAGTGGACTGGCCTCAAAGCAAGCATTCAGAAGAAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGGCAATGGGTGGATCTaGTTGCACTATTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPGNGWI*LHYFIN
Trigger: GTTGATGAAATAGTGCAACCAGATCCACCCATTGCC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAATATCTGCATTGCGTaGTGCTTCCCATCTCACTTG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPNICIA*CFPSHL
Trigger: CAAGTGAGATGGGAAGCACCACGCAATGCAGATATT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACTTTGGAACTGGAACTaGGGGCAGAATCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPLWNWN*GQNQHF
Trigger: AAAATGCTGATTCTGCCCCCAGTTCCAGTTCCAAAG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGATTCCTTTAATCTTTaGAACTGGAACTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPDSFNL*NWNWGQ
Trigger: CTGCCCCCAGTTCCAGTTCCAAAGATTAAAGGAATC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
CDS-3UTR CCA 90 bp CAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTCCTTGAGGAGATCTaGATCGATTCCTTTAATCTT +
Preference number: 4 (lower is better)
Translates to: QSETISGCMSHWDIPALFFLEEI*IDSFNL
Trigger: AAGATTAAAGGAATCGATCCAGATCTCCTCAAGGAA...GAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGGGTGCATGTCACATTaGGACATCCCTGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISGCMSH*DIPALF
Trigger: GAATAAGGCAGGGATGTCCCAATGTGACATGCACCC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CATCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCAATGGAGGTATAGTCTaGGACAGGCATCTCAGAACC +
Preference number: 4 (lower is better)
Translates to: HPSPLGYYVISHGHCLEVNGGIV*DRHLRT
Trigger: GGTTCTGAGATGCCTGTCCCAGACTATACCTCCATT...GACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACACTGTACTATATGAATaGAGGTATAGTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDTVLYE*RYSLGQ
Trigger: CTGTCCCAGACTATACCTCCATTCATATAGTACAGT...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGAGTATGAGGCCCTGTaGGGACTGTACTATATGAAT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPEYEAL*GLYYMN
Trigger: ATTCATATAGTACAGTCCCCACAGGGCCTCATACTC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTTATCTTCCCAATATaGACTCCCTGGGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPFIFPI*TPWVCQ
Trigger: TTGGCAGACCCAGGGAGTCCATATTGGGAAGATAAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR CCA 90 bp CAGTCTTTGAAGCTAGCTGGATTTCAGTTTGAATCCCAGCTGTGCAACTTGCTAGCCAAGAGCAAAGAGTaGAAAAACCAAGCTACAGGG +
Preference number: 4 (lower is better)
Translates to: QSLKLAGFQFESQLCNLLAKSKE*KNQATG
Trigger: CCCTGTAGCTTGGTTTTTCCACTCTTTGCTCTTGGC...TAGCAAGTTGCACAGCTGGGATTCAAACTGAAATCCAGCTAGCTTCAAAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513671.5
3UTR CAA 72 bp TCACCTGGGCATAAAAGTCGATGTTTGACAGTGAACTaGGATTGCTTAGCTGAATATGGGCAGCTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SPGHKSRCLTVN*DCLAEYGQLGE
Trigger: CTCACCAAGCTGCCCATATTCAGCTAAGCAATCCAAGTTCACTGTCAAACATCGACTTTTATGCCCAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAGAAAAAGCATCACTTaGTCCTGCCAGTGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISRKSIT*SCQCQG
Trigger: ACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTCT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CCCAGTCAATTCTTTGCTATTAAATACGTAGCTCTTGGGAAACCAAAGAAAGGCAGTCTCTCGCTCAGGTaGACGGCACTTGGTGAATTT +
Preference number: 4 (lower is better)
Translates to: PSQFFAIKYVALGKPKKGSLSLR*TALGEF
Trigger: AAATTCACCAAGTGCCGTTCACCTGAGCGAGAGACT...GCCTTTCTTTGGTTTCCCAAGAGCTACGTATTTAATAGCAAAGAATTGACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR TCA 90 bp ATTCAACCCAAGAGTCATCACTGTGGAATTCGGGTTTATAGCTATCATGAATGGATCTGTCCAGTGGCATaGAAAAGTCTCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: IQPKSHHCGIRVYSYHEWICPVA*KSLSLR
Trigger: CCTGAGCGAGAGACTTTTTCATGCCACTGGACAGAT...CCATTCATGATAGCTATAAACCCGAATTCCACAGTGATGACTCTTGGGTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGAATCCCAGTTAAACTaGCGTTCAGTAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPESQLN*RSVKSS
Trigger: ACTGGACTTTACTGAACGTCAGTTTAACTGGGATTC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAACTTGGATATCTGCATaGATCCCAGTTAAACTGACG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPTWISA*IPVKLT
Trigger: CGTCAGTTTAACTGGGATTCATGCAGATATCCAAGT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCATAGAGCACCTCACTaGACTCGCCATAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISHRAPH*TRHNFQ
Trigger: CTGGAAATTATGGCGAGTTCAGTGAGGTGCTCTATG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp ATTCAACCCAAGAGTCATCACTGTGGAATTCGGGTTTATAGCTATCATGAATGGATATGGGCAGCTTGGTaGGTTGACTCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: IQPKSHHCGIRVYSYHEWIWAAW*VDSAPS
Trigger: TGAAGGAGCTGAGTCAACTCACCAAGCTGCCCATAT...CCATTCATGATAGCTATAAACCCGAATTCCACAGTGATGACTCTTGGGTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGTGTGTGATTCAACCTTaGTGTGAGGAGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQCVIQP*CEEPQG
Trigger: TCCCTGTGGCTCCTCACATCAAGGTTGAATCACACA...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGCTTGGCTGTATGTGTaGTTCAACCTTGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISAWLYV*FNLDVR
Trigger: CCTCACATCAAGGTTGAATCACACATACAGCCAAGC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGGCTTGGCTGTATGTGTaGTTCAACCTTGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLAWLYV*FNLDVR
Trigger: CCTCACATCAAGGTTGAATCACACATACAGCCAAGC...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGTTATCTGTGGGGACTaGAAACCTTGTTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPVICGD*KPCFFC
Trigger: ACAGAAGAAACAAGGTTTTCAGTCCCCACAGATAAC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGCTTCTTTTTCTTCTaGATGCTTGCTTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPCFFFF*MLALRP
Trigger: TGGCCTCAAAGCAAGCATTCAGAAGAAAAAGAAGCA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGATCTCAACAAGGGGTaGAGTGTGAATTTATCTTCC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPDLNKG*SVNLSS
Trigger: GGAAGATAAATTCACACTTCACCCCTTGTTGAGATC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTA +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISKVNSS*QRSIPV
Trigger: TACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CTCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACACCTGGATTAACACTTTaGAGACTCCAGGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LMYVIGIEISLQNVRFTTPGLTL*RLQGAL
Trigger: CAGAGCACCCTGGAGTCTGCAAAGTGTTAATCCAGG...TGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTATCTGCATTGCGTGGTaGTTCCCATCTCACTTGGAT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISICIAW*FPSHLD
Trigger: ATCCAAGTGAGATGGGAAGCACCACGCAATGCAGAT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGGTTTGTTTTTCTCTaGTTGGATAACACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPWFVFL*LDNTGL
Trigger: CAGCCCAGTGTTATCCAAGCAGAGAAAAACAAACCA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAACAGTGAACTTGGATTaGTTAGCTGAATATGGGCAG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPTVNLD*LAEYGQ
Trigger: CTGCCCATATTCAGCTAAGCAATCCAAGTTCACTGT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGGAGACCATTTCCGGGTaGATGTCACATTGGGACATC +
Preference number: 4 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQETISG*MSHWDI
Trigger: GATGTCCCAATGTGACATGCACCCGGAAATGGTCTC...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp TCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTGTTCAGTTGGTCTGTaGTCACATAGCCACATGATG +
Preference number: 4 (lower is better)
Translates to: SFTPRLLCDFSWSLLRSLCSVGL*SHSHMM
Trigger: CATCATGTGGCTATGTGAGCACAGACCAACTGAACA...CAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAGGGGTCATACCAACTaGAGTACACAGTGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISRGHTN*STQCVV
Trigger: CACTACACACTGTGTACTGCAGTTGGTATGACCCCT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGTGAACAGATTCCGCTaGAGAGGCTATAGATCTTAT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPVNRFR*RGYRSY
Trigger: ATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCAC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTGCAGAACAAATCTTaGCTGTGGACTTGCACCCAG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISLQNKS*LWTCTQ
Trigger: CTGGGTGCAAGTCCACAGGCAAGATTTGTTCTGCAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR GCA 90 bp CAGTCTTTGAAGCTAGCTGGATTTCAGTTTGAATCCCAGCTGTGCAACTTGCTACCCGTAAGATCCTTTTaGCAAGAGCAAAGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QSLKLAGFQFESQLCNLLPVRSF*QEQRVE
Trigger: TTCCACTCTTTGCTCTTGGCAAAAGGATCTTACGGG...TAGCAAGTTGCACAGCTGGGATTCAAACTGAAATCCAGCTAGCTTCAAAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTACCTCATCTGTCCAGTaGCATGAAAAAGTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISTSSVQ*HEKVSR
Trigger: GCGAGAGACTTTTTCATGCCACTGGACAGATGAGGT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACTTGAGTGTTCCTTCTaGTATAGAACAGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPLECSF*YRTAVW
Trigger: CCATACAGCTGTTCTATACCAGAAGGAACACTCAAG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp TCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGGGCAATGGGTGGATCTaGTTGCACTATTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: SFTPRLLCDFSWSLLRSLGNGWI*LHYFIN
Trigger: GTTGATGAAATAGTGCAACCAGATCCACCCATTGCC...CAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp CCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTGGCAATGGGTGGATCTaGTTGCACTATTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: PSPLGYYVISHGHCLEVCGNGWI*LHYFIN
Trigger: GTTGATGAAATAGTGCAACCAGATCCACCCATTGCC...ACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGTTGAGGGCAATGGGTaGATCTGGTTGCACTATTTC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISVEGNG*IWLHYF
Trigger: GAAATAGTGCAACCAGATCCACCCATTGCCCTCAAC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp ATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTGGTAGTTGAGGGCAATGGGTaGATCTGGTTGCACTATTTC +
Preference number: 4 (lower is better)
Translates to: MSLALKSVSRMSGSQQLVVEGNG*IWLHYF
Trigger: GAAATAGTGCAACCAGATCCACCCATTGCCCTCAAC...TACCAGCTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACAGAGTTTCGTTGTTTaGATCTCACACGCACTTCAT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPQSFVV*ISHALH
Trigger: ATGAAGTGCGTGTGAGATCCAAACAACGAAACTCTG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTTAATCTTTGGAACTaGAACTGGGGGCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPFNLWN*NWGQNQ
Trigger: CTGATTCTGCCCCCAGTTCCAGTTCCAAAGATTAAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCAGGGATGCACTTTTTaGCATCTGCCTCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISQGCTF*HLPHRS
Trigger: ACTTCTGTGAGGCAGATGCCAAAAAGTGCATCCCTG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAATGGAGGTATAGTCTaGGACAGGCATCTCAGAACC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISNGGIV*DRHLRT
Trigger: GGTTCTGAGATGCCTGTCCCAGACTATACCTCCATT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTACCATCCATCCTTTCTaGATATCTGCATTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISTIHPF*ISALRG
Trigger: ACCACGCAATGCAGATATTCAGAAAGGATGGATGGT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp ATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTGGTAACCATCCATCCTTTCTaGATATCTGCATTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: MSLALKSVSRMSGSQQLVTIHPF*ISALRG
Trigger: ACCACGCAATGCAGATATTCAGAAAGGATGGATGGT...TACCAGCTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGTATGTCATTGGCATTaGAATCAGTCTCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPVCHWH*NQSPEC
Trigger: ACATTCTGGAGACTGATTTCAATGCCAATGACATAC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp ATTCGGGTTTATAGCTATCATGAATGGCTAAGATTGTGTTCACCTCCTCTAATTATAACACTGGGCTGCTaGGTAGCAGGGCAAGCATCA +
Preference number: 4 (lower is better)
Translates to: IRVYSYHEWLRLCSPPLIITLGC*VAGQAS
Trigger: TGATGCTTGCCCTGCTACTCAGCAGCCCAGTGTTAT...AATTAGAGGAGGTGAACACAATCTTAGCCATTCATGATAGCTATAAACCCGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR TCA 90 bp CTCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTTGGCTGTATGTGTaGTTCAACCTTGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: LMYVIGIEISLQNVRFTTAWLYV*FNLDVR
Trigger: CCTCACATCAAGGTTGAATCACACATACAGCCAAGC...TGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp CCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTGTTATCTGTGGGGACTaGAAACCTTGTTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PSPLGYYVISHGHCLEVCVICGD*KPCFFC
Trigger: ACAGAAGAAACAAGGTTTTCAGTCCCCACAGATAAC...ACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCCGGCAGATATTGCTaGAATAGAGGCTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSGRYC*NRGWIF
Trigger: GAAAATCCAGCCTCTATTTCAGCAATATCTGCCGGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS-3UTR GCA 90 bp CTCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAATCTGCATTGCGTGGTaGTTCCCATCTCACTTGGAT +
Preference number: 4 (lower is better)
Translates to: LMYVIGIEISLQNVRFTTICIAW*FPSHLD
Trigger: ATCCAAGTGAGATGGGAAGCACCACGCAATGCAGAT...TGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCTGAATATCTGCATTaGGTGGTGCTTCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSEYLH*VVLPIS
Trigger: TGAGATGGGAAGCACCACGCAATGCAGATATTCAGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGTCTGAATATCTGCATTaGGTGGTGCTTCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLSEYLH*VVLPIS
Trigger: TGAGATGGGAAGCACCACGCAATGCAGATATTCAGA...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCCTTTCTGAATATCTaGATTGCGTGGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSFLNI*IAWCFP
Trigger: TGGGAAGCACCACGCAATGCAGATATTCAGAAAGGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAATTTCTCATGGTCACTaGTTAGAAGTCTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPISHGH*LEVCLC
Trigger: ACACAGACAGACTTCTAAGCAGTGACCATGAGAAAT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTACAGTGAACTTGGATTaGTTAGCTGAATATGGGCAG +
Preference number: 4 (lower is better)
Translates to: PSPLGYYVISHGHCLEVCTVNLD*LAEYGQ
Trigger: CTGCCCATATTCAGCTAAGCAATCCAAGTTCACTGT...ACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGCACTTTTTGGCATCTaGCTCACAGAAGTAGGCATT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISALFGI*LTEVGI
Trigger: AATGCCTACTTCTGTGAGGCAGATGCCAAAAAGTGC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGTTCAGTTGGTCTGTaGTCACATAGCCACATGATG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISCSVGL*SHSHMM
Trigger: CATCATGTGGCTATGTGAGCACAGACCAACTGAACA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGAGGGGTCATACCAACTaGAGTACACAGTGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQRGHTN*STQCVV
Trigger: CACTACACACTGTGTACTGCAGTTGGTATGACCCCT...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR GCA 90 bp TCACCTGGGCATAAAAGTCGATGTTTGACAGTGAACTTGGATTGCTTAGCTGAATTTCTTCTGAATGCTTaGTTTGAGGCCAGTCCACTC +
Preference number: 4 (lower is better)
Translates to: SPGHKSRCLTVNLDCLAEFLLNA*FEASPL
Trigger: GAGTGGACTGGCCTCAAAGCAAGCATTCAGAAGAAA...TTCAGCTAAGCAATCCAAGTTCACTGTCAAACATCGACTTTTATGCCCAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CCA 90 bp CCCAGTCAATTCTTTGCTATTAAATACGTAGCTCTTGGGAAACCAAAGAAAGGCACCTCATCTGTCCAGTaGCATGAAAAAGTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: PSQFFAIKYVALGKPKKGTSSVQ*HEKVSR
Trigger: GCGAGAGACTTTTTCATGCCACTGGACAGATGAGGT...GCCTTTCTTTGGTTTCCCAAGAGCTACGTATTTAATAGCAAAGAATTGACTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATATAGAACAGCTGTATaGGTCCTAGGTTCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPYRTAV*VLGSLY
Trigger: GTACAAAGAACCTAGGACCCATACAGCTGTTCTATA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGGCAATGGGTGGATCTaGTTGCACTATTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISGNGWI*LHYFIN
Trigger: GTTGATGAAATAGTGCAACCAGATCCACCCATTGCC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAATATCTGCATTGCGTaGTGCTTCCCATCTCACTTG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISNICIA*CFPSHL
Trigger: CAAGTGAGATGGGAAGCACCACGCAATGCAGATATT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp TCACCTGGGCATAAAAGTCGATGTTTGACAGTGAACTTGGATTGCTTAGCTGAAAATATCTGCATTGCGTaGTGCTTCCCATCTCACTTG +
Preference number: 4 (lower is better)
Translates to: SPGHKSRCLTVNLDCLAENICIA*CFPSHL
Trigger: CAAGTGAGATGGGAAGCACCACGCAATGCAGATATT...TTCAGCTAAGCAATCCAAGTTCACTGTCAAACATCGACTTTTATGCCCAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp ATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTGGTAAATATCTGCATTGCGTaGTGCTTCCCATCTCACTTG +
Preference number: 4 (lower is better)
Translates to: MSLALKSVSRMSGSQQLVNICIA*CFPSHL
Trigger: CAAGTGAGATGGGAAGCACCACGCAATGCAGATATT...TACCAGCTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp CATCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCCAGAGTTTCGTTGTTTaGATCTCACACGCACTTCAT +
Preference number: 4 (lower is better)
Translates to: HPSPLGYYVISHGHCLEVQSFVV*ISHALH
Trigger: ATGAAGTGCGTGTGAGATCCAAACAACGAAACTCTG...GACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCTTTGGAACTGGAACTaGGGGCAGAATCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISLWNWN*GQNQHF
Trigger: AAAATGCTGATTCTGCCCCCAGTTCCAGTTCCAAAG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGATTCCTTTAATCTTTaGAACTGGAACTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISDSFNL*NWNWGQ
Trigger: CTGCCCCCAGTTCCAGTTCCAAAGATTAAAGGAATC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAGTAGGAAGTGGTTGTaGTTTGTTTTTCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSRKWL*FVFLCL
Trigger: CAAGCAGAGAAAAACAAACCACAACCACTTCCTACT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAATAAGGAAGTTTTCTTaGCAGAGTGAGACCATTTCC +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPIRKFS*QSETIS
Trigger: GGAAATGGTCTCACTCTGCCAAGAAAACTTCCTTAT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAACTGTACTATATGAATaGAGGTATAGTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPTVLYE*RYSLGQ
Trigger: CTGTCCCAGACTATACCTCCATTCATATAGTACAGT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGAGTATGAGGCCCTGTaGGGACTGTACTATATGAAT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISEYEAL*GLYYMN
Trigger: ATTCATATAGTACAGTCCCCACAGGGCCTCATACTC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGGAGTATGAGGCCCTGTaGGGACTGTACTATATGAAT +
Preference number: 4 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLEYEAL*GLYYMN
Trigger: ATTCATATAGTACAGTCCCCACAGGGCCTCATACTC...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp TCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGATTGTTGAAGGAGTCTaGGGAGGTATAAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SFTPRLLCDFSWSLLRSLIVEGV*GGIKGL
Trigger: AAGCCCTTTTATACCTCCCCAGACTCCTTCAACAAT...CAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622294.2
3UTR CAA 72 bp CACCTCACTGAACTCGCCATAATTTCCAGAGTTTCGTaGTTTGGATCTCACACGCACTTCATATTCCTTATC +
Preference number: 4 (lower is better)
Translates to: HLTELAIISRVS*FGSHTHFIFLI
Trigger: GATAAGGAATATGAAGTGCGTGTGAGATCCAAACAACGAAACTCTGGAAATTATGGCGAGTTCAGTGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGAATCCCAGTTAAACTaGCGTTCAGTAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISESQLN*RSVKSS
Trigger: ACTGGACTTTACTGAACGTCAGTTTAACTGGGATTC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTACTTGGATATCTGCATaGATCCCAGTTAAACTGACG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISTWISA*IPVKLT
Trigger: CGTCAGTTTAACTGGGATTCATGCAGATATCCAAGT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp ATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTGGTAACTTGGATATCTGCATaGATCCCAGTTAAACTGACG +
Preference number: 4 (lower is better)
Translates to: MSLALKSVSRMSGSQQLVTWISA*IPVKLT
Trigger: CGTCAGTTTAACTGGGATTCATGCAGATATCCAAGT...TACCAGCTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR TCA 90 bp ATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTGGTAGTATCTTGGTCAGTGTaGACCAGCTATGATTTCTAC +
Preference number: 4 (lower is better)
Translates to: MSLALKSVSRMSGSQQLVVSWSV*TSYDFY
Trigger: GTAGAAATCATAGCTGGTTCACACTGACCAAGATAC...TACCAGCTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR TCA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGTGCTTCTTTTTCTTCTaGATGCTTGCTTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLCFFFF*MLALRP
Trigger: TGGCCTCAAAGCAAGCATTCAGAAGAAAAAGAAGCA...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR TCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACCAAACACACAGCTTTaGATTGAATTAGGTTCTACA +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPPNTQL*IELGST
Trigger: TGTAGAACCTAATTCAATTCAAAGCTGTGTGTTTGG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp CTAGCTGGATTTCAGTTTGAATCCCAGCTGTGCAACTTGCTAGTAATGTTACATAAGACTCCATTTTCTTaGTATGTGAGCATGGACCCC +
Preference number: 4 (lower is better)
Translates to: LAGFQFESQLCNLLVMLHKTPFS*YVSMDP
Trigger: GGGGTCCATGCTCACATATCAAGAAAATGGAGTCTT...ATGTAACATTACTAGCAAGTTGCACAGCTGGGATTCAAACTGAAATCCAGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR GCA 90 bp TGCCAAGAGCAAAGAGTGGAAAAACCAAGCTACAGGGTTAATTTTTCTAAGCTAAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTA +
Preference number: 4 (lower is better)
Translates to: CQEQRVEKPSYRVNFSKLKVNSS*QRSIPV
Trigger: TACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTT...TAGCTTAGAAAAATTAACCCTGTAGCTTGGTTTTTCCACTCTTTGCTCTTGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR GCA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGTCCTTTCTGAATATCTaGATTGCGTGGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQSFLNI*IAWCFP
Trigger: TGGGAAGCACCACGCAATGCAGATATTCAGAAAGGA...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGGTTTGTTTTTCTCTaGTTGGATAACACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISWFVFL*LDNTGL
Trigger: CAGCCCAGTGTTATCCAAGCAGAGAAAAACAAACCA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTACAGTGAACTTGGATTaGTTAGCTGAATATGGGCAG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISTVNLD*LAEYGQ
Trigger: CTGCCCATATTCAGCTAAGCAATCCAAGTTCACTGT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR GCA 90 bp CCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTTGGCTTAAACGTTATTaGCCCAGTCAATTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PSPLGYYVISHGHCLEVCWLKRY*PSQFFA
Trigger: AGCAAAGAATTGACTGGGGCAATAACGTTTAAGCCA...ACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR GCA 90 bp ATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTGGTAGTGAACAGATTCCGCTaGAGAGGCTATAGATCTTAT +
Preference number: 4 (lower is better)
Translates to: MSLALKSVSRMSGSQQLVVNRFR*RGYRSY
Trigger: ATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCAC...TACCAGCTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCTTGAGTGTTCCTTCTaGTATAGAACAGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISLECSF*YRTAVW
Trigger: CCATACAGCTGTTCTATACCAGAAGGAACACTCAAG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCAGAGTTTCGTTGTTTaGATCTCACACGCACTTCAT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISQSFVV*ISHALH
Trigger: ATGAAGTGCGTGTGAGATCCAAACAACGAAACTCTG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTTAATCTTTGGAACTaGAACTGGGGGCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISFNLWN*NWGQNQ
Trigger: CTGATTCTGCCCCCAGTTCCAGTTCCAAAGATTAAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTCCTTGAGGAGATCTaGATCGATTCCTTTAATCTT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPFLEEI*IDSFNL
Trigger: AAGATTAAAGGAATCGATCCAGATCTCCTCAAGGAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
CDS-3UTR CCA 90 bp CCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTACTGTACTATATGAATaGAGGTATAGTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: PSPLGYYVISHGHCLEVCTVLYE*RYSLGQ
Trigger: CTGTCCCAGACTATACCTCCATTCATATAGTACAGT...ACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp CTCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGAGTATGAGGCCCTGTaGGGACTGTACTATATGAAT +
Preference number: 4 (lower is better)
Translates to: LMYVIGIEISLQNVRFTTEYEAL*GLYYMN
Trigger: ATTCATATAGTACAGTCCCCACAGGGCCTCATACTC...TGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACACATCACACTGATTTaGTTAAAATCTGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPHITLI*LKSDRE
Trigger: CTCTCTGTCAGATTTTAACCAAATCAGTGTGATGTG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS-3UTR CCA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACTTCAAGGTCAGTTCTaGTTAAAGAAGTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPLQGQF*LKKLLI
Trigger: AATGAGCAACTTCTTTAACCAGAACTGACCTTGAAG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615111.4
3UTR CAA 72 bp CTAGCTGGATTTCAGTTTGAATCCCAGCTGTGCAACTaGCTAGTAATGTTACATAAGTTCTCTAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LAGFQFESQLCN*LVMLHKFSKLQ
Trigger: CTGGAGCTTAGAGAACTTATGTAACATTACTAGCAAGTTGCACAGCTGGGATTCAAACTGAAATCCAGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR TCA 90 bp ATTCGGGTTTATAGCTATCATGAATGGCTAAGATTGTGTTCACCTCCTCTAATTAGAAAAAGCATCACTTaGTCCTGCCAGTGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: IRVYSYHEWLRLCSPPLIRKSIT*SCQCQG
Trigger: ACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTCT...AATTAGAGGAGGTGAACACAATCTTAGCCATTCATGATAGCTATAAACCCGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGTATGTCATTGGCATTaGAATCAGTCTCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISVCHWH*NQSPEC
Trigger: ACATTCTGGAGACTGATTTCAATGCCAATGACATAC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp TTCATTTACTTCTTTGTATTGAAGTTCATACTCCAGAACCATCCATCCTTTCTGGTTTTCTTGGCAGAGTaGGACCATTTCCGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: FIYFFVLKFILQNHPSFLVFLAE*DHFRVH
Trigger: ATGCACCCGGAAATGGTCTCACTCTGCCAAGAAAAC...CAGAAAGGATGGATGGTTCTGGAGTATGAACTTCAATACAAAGAAGTAAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTACAAGGGGTGAAGTGTaGATTTATCTTCCCAATATG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISTRGEV*IYLPNM
Trigger: CATATTGGGAAGATAAATTCACACTTCACCCCTTGT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGTAAGATGCGCCCAGTaGATTCAGCAAATGTTTTAT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISVRCAQ*IQQMFY
Trigger: ATAAAACATTTGCTGAATTCACTGGGCGCATCTTAC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTATTTCTCATGGTCACTaGTTAGAAGTCTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISISHGH*LEVCLC
Trigger: ACACAGACAGACTTCTAAGCAGTGACCATGAGAAAT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTATAGAACAGCTGTATaGGTCCTAGGTTCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISYRTAV*VLGSLY
Trigger: GTACAAAGAACCTAGGACCCATACAGCTGTTCTATA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTTGAGTGTTCCTTCTaGTATAGAACAGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQLECSF*YRTAVW
Trigger: CCATACAGCTGTTCTATACCAGAAGGAACACTCAAG...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAGTAGGAAGTGGTTGTaGTTTGTTTTTCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSRKWL*FVFLCL
Trigger: CAAGCAGAGAAAAACAAACCACAACCACTTCCTACT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTATAAGGAAGTTTTCTTaGCAGAGTGAGACCATTTCC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISIRKFS*QSETIS
Trigger: GGAAATGGTCTCACTCTGCCAAGAAAACTTCCTTAT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTACTGTACTATATGAATaGAGGTATAGTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISTVLYE*RYSLGQ
Trigger: CTGTCCCAGACTATACCTCCATTCATATAGTACAGT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp ATTCGGGTTTATAGCTATCATGAATGGCTAAGATTGTGTTCACCTCCTCTAATTACCATCCATCCTTTCTaGATATCTGCATTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: IRVYSYHEWLRLCSPPLITIHPF*ISALRG
Trigger: ACCACGCAATGCAGATATTCAGAAAGGATGGATGGT...AATTAGAGGAGGTGAACACAATCTTAGCCATTCATGATAGCTATAAACCCGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR TCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCCAAACACACAGCTTTaGATTGAATTAGGTTCTACA +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISPNTQL*IELGST
Trigger: TGTAGAACCTAATTCAATTCAAAGCTGTGTGTTTGG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR TCA 90 bp TGCCAAGAGCAAAGAGTGGAAAAACCAAGCTACAGGGTTAATTTTTCTAAGCTACATTTTCTTGATATGTaGGCATGGACCCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: CQEQRVEKPSYRVNFSKLHFLDM*AWTPSC
Trigger: ACAAGATGGGGTCCATGCTCACATATCAAGAAAATG...TAGCTTAGAAAAATTAACCCTGTAGCTTGGTTTTTCCACTCTTTGCTCTTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR GCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCTTTCACTCATATATaGAAGCAGATCACATCACAC +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSFTHI*KQITSH
Trigger: GTGTGATGTGATCTGCTTGCATATATGAGTGAAAGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS-3UTR CCA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGTATAGAACAGCTGTATaGGTCCTAGGTTCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQYRTAV*VLGSLY
Trigger: GTACAAAGAACCTAGGACCCATACAGCTGTTCTATA...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CCA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTCCTTGAGGAGATCTaGATCGATTCCTTTAATCTT +
Preference number: 4 (lower is better)
Translates to: RAIAALKYLGQCEPAMISFLEEI*IDSFNL
Trigger: AAGATTAAAGGAATCGATCCAGATCTCCTCAAGGAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
CDS-3UTR TCA 90 bp ATTCGGGTTTATAGCTATCATGAATGGCTAAGATTGTGTTCACCTCCTCTAATTGAATCCCAGTTAAACTaGCGTTCAGTAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: IRVYSYHEWLRLCSPPLIESQLN*RSVKSS
Trigger: ACTGGACTTTACTGAACGTCAGTTTAACTGGGATTC...AATTAGAGGAGGTGAACACAATCTTAGCCATTCATGATAGCTATAAACCCGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR CCA 90 bp TTCATTTACTTCTTTGTATTGAAGTTCATACTCCAGAACCATCCATCCTTTCTGATAAGGAAGTTTTCTTaGCAGAGTGAGACCATTTCC +
Preference number: 4 (lower is better)
Translates to: FIYFFVLKFILQNHPSFLIRKFS*QSETIS
Trigger: GGAAATGGTCTCACTCTGCCAAGAAAACTTCCTTAT...CAGAAAGGATGGATGGTTCTGGAGTATGAACTTCAATACAAAGAAGTAAATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS GCA 90 bp CTCAGCAGCAGCCGCCGCCGCCACCGCCACTGTAGCAGCTGCTGCTaGCGCTGCCGCCGCCGCCGCCGCTCCCTAGCCCTCCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LSSSRRRHRHCSSCC*RCRRRRRSLALLLF
Trigger: GAAGAGGAGGAGGGCTAGGGAGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCTGCTACAGTGGCGGTGGCGGCGGCGGCTGCTGCTGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 90 bp GGACCTCCGAGCTTCGCCTCTGATCAGAGAGCGCGGGTTCGCGTCTaGGCTGGGGCCAATGGTGCCGGGGCCTCCGGCCCGCGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: GPPSFASDQRARVRV*AGANGAGASGPRGP
Trigger: GGGGCCACGCGGGCCGGAGGCCCCGGCACCATTGGCCCCAGCGCAGACGCGAACCCGCGCTCTCTGATCAGAGGCGAAGCTCGGAGGTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 90 bp ACGTGCGGCTGCGGCCCGCACAAACGCGCAAAAGACCGCGCGCTCTaGGCGCTGTGTCCACGCGCACAGCTCGACCTCCCCAGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: TCGCGPHKRAKDRAL*ALCPRAQLDLPSLS
Trigger: GGAGAGACTGGGGAGGTCGAGCTGTGCGCGTGGACACAGCGCGCAGAGCGCGCGGTCTTTTGCGCGTTTGTGCGGGCCGCAGCCGCACGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS GCA 90 bp CCAGGGGTCACGCCGCGCCTGGCCCGCAGTCCCCCAGATCCAGGTTaGAGAAGCGAAGGCGAAGCGGACGTTCAAGGAGGCCAGTTCGAG +
Preference number: 5 (lower is better)
Translates to: PGVTPRLARSPPDPG*RSEGEADVQGGQFE
Trigger: CTCGAACTGGCCTCCTTGAACGTCCGCTTCGCCTTCGCTTCTGCAACCTGGATCTGGGGGACTGCGGGCCAGGCGCGGCGTGACCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 90 bp GCTGTCACTCTACTGACCCCAGTTCCATCGGTGCCAACGTGCGGCTaGGGCCCGCACAAACGCGCAAAAGACCGCGCGCTCTGCGCGCTG +
Preference number: 5 (lower is better)
Translates to: AVTLLTPVPSVPTCG*GPHKRAKDRALCAL
Trigger: CAGCGCGCAGAGCGCGCGGTCTTTTGCGCGTTTGTGCGGGCCGCAGCCGCACGTTGGCACCGATGGAACTGGGGTCAGTAGAGTGACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS GCA 90 bp CTGGTGGCTGTCACTCTACTGACCCCAGTTCCATCGGTGCCAACGTaGGGCTGCGGCCCGCACAAACGCGCAAAAGACCGCGCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LVAVTLLTPVPSVPT*GCGPHKRAKDRALC
Trigger: GCAGAGCGCGCGGTCTTTTGCGCGTTTGTGCGGGCCGCAGCCGCACGTTGGCACCGATGGAACTGGGGTCAGTAGAGTGACAGCCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS TCA 90 bp GAGAGGCCGAGTGCCGCCCGGGCCAAGCATTCCGAGTTGCTGGGATaGAGTCTTCCCGGCGAGGAGCTGGAGTTGGTGCGTGTCACTCTC +
Preference number: 5 (lower is better)
Translates to: ERPSAARAKHSELLG*SLPGEELELVRVTL
Trigger: GAGAGTGACACGCACCAACTCCAGCTCCTCGCCGGGAAGACTTCATCCCAGCAACTCGGAATGCTTGGCCCGGGCGGCACTCGGCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 90 bp AGCGAAGGCGAAGCGGACGTTCAAGGAGGCCAGTTCGAGAACTGCTaGGGAGAGGCCGAGTGCCGCCCGGGCCAAGCATTCCGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: SEGEADVQGGQFENC*GEAECRPGQAFRVA
Trigger: AGCAACTCGGAATGCTTGGCCCGGGCGGCACTCGGCCTCTCCGCAGCAGTTCTCGAACTGGCCTCCTTGAACGTCCGCTTCGCCTTCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS TCA 90 bp ACCTGTAGGACCCCAGTTCATGCGGACTGGTGGCTGTCACTCTACTaGCCCCAGTTCCATCGGTGCCAACGTGCGGCTGCGGCCCGCACA +
Preference number: 5 (lower is better)
Translates to: TCRTPVHADWWLSLY*PQFHRCQRAAAART
Trigger: TGTGCGGGCCGCAGCCGCACGTTGGCACCGATGGAACTGGGGTCAGTAGAGTGACAGCCACCAGTCCGCATGAACTGGGGTCCTACAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513671.5
ENST00000620156.4
CDS GCA 90 bp GACGTTCAAGGAGGCCAGTTCGAGAACTGCTGCGGAGAGGCCGAGTaGCGCCCGGGCCAAGCATTCCGAGTTGCTGGGATGAAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: DVQGGQFENCCGEAE*RPGQAFRVAGMKSS
Trigger: GGAAGACTTCATCCCAGCAACTCGGAATGCTTGGCCCGGGCGGCACTCGGCCTCTCCGCAGCAGTTCTCGAACTGGCCTCCTTGAACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS TCA 90 bp GCTCATTTTAACCCAGTTCATGCGGACTGGTGGCTGTCACTCTACTaGCCCCAGTTCCATCGGTGCCAACGTGCGGCTGCGGCCCGCACA +
Preference number: 5 (lower is better)
Translates to: AHFNPVHADWWLSLY*PQFHRCQRAAAART
Trigger: TGTGCGGGCCGCAGCCGCACGTTGGCACCGATGGAACTGGGGTCAGTAGAGTGACAGCCACCAGTCCGCATGAACTGGGTTAAAATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCGCGGGCTGTCAGGCTaGGGGAGGAGAGAGGGGGCG +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISRGLSG*GRREGA
Trigger: CGCCCCCTCTCTCCTCCCCAAGCCTGACAGCCCGCG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAATGGCTGCGCCCTGCTaGGCAGCTCGCGGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPMAAPC*AARGLS
Trigger: TGACAGCCCGCGAGCTGCCAAGCAGGGCGCAGCCAT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR CAA 90 bp TCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTGGGGACTGTACTCGGGTGCATGTCACATaGGGACATCCCTGCCTTATT +
Preference number: 5 (lower is better)
Translates to: SGKGKAVALSMRPCGDCTRVHVT*GHPCLI
Trigger: AATAAGGCAGGGATGTCCCAATGTGACATGCACCCG...AGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS TCA 90 bp TGTAGGACCTTTGCCCAGTACATCTCTGGGCTCTGCCTGCTGAACTaGAGGCCAGGCCTAGGCTGGAGTCTCATGAGGCCTATTACAATG +
Preference number: 5 (lower is better)
Translates to: CRTFAQYISGLCLLN*RPGLGWSLMRPITM
Trigger: CATTGTAATAGGCCTCATGAGACTCCAGCCTAGGCCTGGCCTTCAGTTCAGCAGGCAGAGCCCAGAGATGTACTGGGCAAAGGTCCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618088.4
CDS-3UTR CAA 90 bp TGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCTTCAGTAAAGTCCAGTaGAGGGCAATGGGTGGATCT +
Preference number: 5 (lower is better)
Translates to: WDRHLRTWNMFSCPRPPSFSKVQ*RAMGGS
Trigger: AGATCCACCCATTGCCCTCAACTGGACTTTACTGAA...GCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACGGCAAGGCAGTCGCATaGAGTATGAGGCCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDGKAVA*SMRPCG
Trigger: CCCACAGGGCCTCATACTCAATGCGACTGCCTTGCC...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS GCA 90 bp GAAAAAGCATCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCTCCGAGCTTCGCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: EKASLDPASAKVNSS*QRSIPVGPPSFASD
Trigger: ATCAGAGGCGAAGCTCGGAGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 90 bp GAAAAAGCATCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCCCAGTTCATGCGGACTGGT +
Preference number: 5 (lower is better)
Translates to: EKASLDPASAKVNSS*QRSIPVGPQFMRTG
Trigger: ACCAGTCCGCATGAACTGGGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513671.5
ENST00000620156.4
CDS GCA 90 bp GAAAAAGCATCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCCCAGGCTCATACGTGCTGT +
Preference number: 5 (lower is better)
Translates to: EKASLDPASAKVNSS*QRSIPVGPQAHTCC
Trigger: ACAGCACGTATGAGCCTGGGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537449.5
CDS-3UTR CAA 90 bp TGGCAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTAGCCTGGATTAACACTTaGCAGACTCCAGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: WQSETISGCMSHWDIPALAWINT*QTPGCS
Trigger: AGAGCACCCTGGAGTCTGCAAAGTGTTAATCCAGGC...TAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp TCTGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCATGCTTCCCATCTCACTaGGATATCTGCATGAATCCC +
Preference number: 5 (lower is better)
Translates to: SGTGISEPGTCSPVPGLPCFPSH*DICMNP
Trigger: GGGATTCATGCAGATATCCAAGTGAGATGGGAAGCA...TGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACCCCTGCCTTATTCTTTaGGCCCGGGGAAAGGACCAC +
Preference number: 5 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDPCLIL*ARGKDH
Trigger: GTGGTCCTTTCCCCGGGCCAAAAGAATAAGGCAGGG...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS TCA 90 bp GCTAAGGATAGCTGCTGTGGCCTCACTTCCAGAAAAAGCATCACTTaGTCCTGCCAGTGCCAAGGTCAACAGCAGCTGCCAGAGATCCAT +
Preference number: 5 (lower is better)
Translates to: AKDSCCGLTSRKSIT*SCQCQGQQQLPEIH
Trigger: ATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTCTGGAAGTGAGGCCACAGCAGCTATCCTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000230882.9
ENST00000511135.5
ENST00000513671.5
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCCCCCAGATCCAGGTaGCAGAAGCGAAGGCGAAGC +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSPRSR*QKRRRS
Trigger: GCTTCGCCTTCGCTTCTGCAACCTGGATCTGGGGGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR CAA 90 bp CCCATCCTGCTTTCTAATCTCAGAGCCTTGGTAGGTAGGGGTAGTATGCAGCAGGCCTGGATTAACACTTaGCAGACTCCAGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: PILLSNLRALVGRGSMQQAWINT*QTPGCS
Trigger: AGAGCACCCTGGAGTCTGCAAAGTGTTAATCCAGGC...CTGCTGCATACTACCCCTACCTACCAAGGCTCTGAGATTAGAAAGCAGGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR CAA 90 bp CAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCAGCAGTCCACTGTACCACCATaGCTAGTTAGCTTGATACAA +
Preference number: 5 (lower is better)
Translates to: QASQNLEHVLLSQASQQQSTVPP*LVSLIQ
Trigger: TTGTATCAAGCTAACTAGCAATGGTGGTACAGTGGA...CTGCTGCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp TCTGGGACAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAATTTCCAGAGTTTCGTaGTTTGGATCTCACACGCAC +
Preference number: 5 (lower is better)
Translates to: SGTGISEPGTCSPVPGLPISRVS*FGSHTH
Trigger: GTGCGTGTGAGATCCAAACAACGAAACTCTGGAAAT...TGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTGTCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGGCAAGGCAGTCGCATaGAGTATGAGGCCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPGKAVA*SMRPCG
Trigger: CCCACAGGGCCTCATACTCAATGCGACTGCCTTGCC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGTAATCCCAGCACTTaGGGAGGCCGAGTCGGGTGG +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPCNPST*GGRVGW
Trigger: CCACCCGACTCGGCCTCCCAAAGTGCTGGGATTACA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS TCA 90 bp GGACCTGGTTATCAGAGGAGCAAGGCTGGAGATCTCAACAAGGGGTaGAGTGTGAATTTATCTTCCCAATATGGACTCCCTGGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: GPGYQRSKAGDLNKG*SVNLSSQYGLPGSA
Trigger: GGCAGACCCAGGGAGTCCATATTGGGAAGATAAATTCACACTTCACCCCTTGTTGAGATCTCCAGCCTTGCTCCTCTGATAACCAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS GCA 90 bp GAAAAAGCATCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCTGGTTATCAGAGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: EKASLDPASAKVNSS*QRSIPVGPGYQRSK
Trigger: CTTGCTCCTCTGATAACCAGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS GCA 90 bp GAAAAAGCATCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCTTTGCCCAGTACATCTCTG +
Preference number: 5 (lower is better)
Translates to: EKASLDPASAKVNSS*QRSIPVGPLPSTSL
Trigger: CAGAGATGTACTGGGCAAAGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618088.4
CDS-3UTR CAA 90 bp CAGGCATCTCAGAACCTGGAACATGTTCTCCTGTCCCAGGCCTCCCAGCAGCAGCATAAAAGTCGATGTTaGACAGTGAACTTGGATTGC +
Preference number: 5 (lower is better)
Translates to: QASQNLEHVLLSQASQQQHKSRC*TVNLDC
Trigger: GCAATCCAAGTTCACTGTCAAACATCGACTTTTATG...CTGCTGCTGGGAGGCCTGGGACAGGAGAACATGTTCCAGGTTCTGAGATGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACCCTGCCTTATTCTTTaGGCCCGGGGAAAGGACCAC +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPPCLIL*ARGKDH
Trigger: GTGGTCCTTTCCCCGGGCCAAAAGAATAAGGCAGGG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp GAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTGGCGGGTGCATGTCACATaGGGACATCCCTGCCTTATT +
Preference number: 5 (lower is better)
Translates to: ETISGCMSHWDIPALFFWRVHVT*GHPCLI
Trigger: AATAAGGCAGGGATGTCCCAATGTGACATGCACCCG...CCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTTGTAATCCCAGCACTTaGGGAGGCCGAGTCGGGTGG +
Preference number: 5 (lower is better)
Translates to: PSPLGYYVISHGHCLEVCCNPST*GGRVGW
Trigger: CCACCCGACTCGGCCTCCCAAAGTGCTGGGATTACA...ACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS GCA 90 bp GAAAAAGCATCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCAATAGTCCGGCAGATATTG +
Preference number: 5 (lower is better)
Translates to: EKASLDPASAKVNSS*QRSIPVGPIVRQIL
Trigger: CAATATCTGCCGGACTATTGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGGCGAGGAGCTGGAGTaGGTGCGTGTCACTCTCAAC +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISGEELE*VRVTLN
Trigger: GTTGAGAGTGACACGCACCAACTCCAGCTCCTCGCC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS-3UTR CAA 90 bp TCAGGCAAGGGCAAGGCAGTCGCATTGAGTATGAGGCCCTGTGGGGACTGTACTGCATTCTTTCCATTCTaGAGTCCATTCTTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: SGKGKAVALSMRPCGDCTAFFPF*SPFLSV
Trigger: AACACTCAAGAATGGACTCAAGAATGGAAAGAATGC...AGTACAGTCCCCACAGGGCCTCATACTCAATGCGACTGCCTTGCCCTTGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTCAGTAAAGTCCAGTaGAGGGCAATGGGTGGATCT +
Preference number: 5 (lower is better)
Translates to: QSETISGCMSHWDIPALFFSKVQ*RAMGGS
Trigger: AGATCCACCCATTGCCCTCAACTGGACTTTACTGAA...GAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp TCTCCAGAATGTCAGGTTCACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCATGCTTCCCATCTCACTaGGATATCTGCATGAATCCC +
Preference number: 5 (lower is better)
Translates to: SPECQVHNSWYVQSRHPSCFPSH*DICMNP
Trigger: GGGATTCATGCAGATATCCAAGTGAGATGGGAAGCA...TGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTGAACCTGACATTCTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGGCAAGGCAGTCGCATaGAGTATGAGGCCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISGKAVA*SMRPCG
Trigger: CCCACAGGGCCTCATACTCAATGCGACTGCCTTGCC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp TCTCCAGAATGTCAGGTTCACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCATCACTCCGCGTGCAATaGCAGCACTTAAGTATCTTG +
Preference number: 5 (lower is better)
Translates to: SPECQVHNSWYVQSRHPSSLRVQ*QHLSIL
Trigger: CAAGATACTTAAGTGCTGCAATTGCACGCGGAGTGA...TGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTGAACCTGACATTCTGGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS GCA 90 bp GAAAAAGCATCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCCTTTGCAAATTCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: EKASLDPASAKVNSS*QRSIPVGPFANSVC
Trigger: ACAGACTGAATTTGCAAAGGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505006.1
CDS GCA 90 bp GAAAAAGCATCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCTTATCTTCCACCATTTCCA +
Preference number: 5 (lower is better)
Translates to: EKASLDPASAKVNSS*QRSIPVGPYLPPFP
Trigger: TGGAAATGGTGGAAGATAAGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612626.4
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGCCTGGATTAACACTTaGCAGACTCCAGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPAWINT*QTPGCS
Trigger: AGAGCACCCTGGAGTCTGCAAAGTGTTAATCCAGGC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCCCTGCCTTATTCTTTaGGCCCGGGGAAAGGACCAC +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISPCLIL*ARGKDH
Trigger: GTGGTCCTTTCCCCGGGCCAAAAGAATAAGGCAGGG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACGGGTGCATGTCACATaGGGACATCCCTGCCTTATT +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPRVHVT*GHPCLI
Trigger: AATAAGGCAGGGATGTCCCAATGTGACATGCACCCG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CCCAGTCAATTCTTTGCTATTAAATACGTAGCTCTTGGGAAACCAAAGAAAGGCGGCAAGGCAGTCGCATaGAGTATGAGGCCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: PSQFFAIKYVALGKPKKGGKAVA*SMRPCG
Trigger: CCCACAGGGCCTCATACTCAATGCGACTGCCTTGCC...GCCTTTCTTTGGTTTCCCAAGAGCTACGTATTTAATAGCAAAGAATTGACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCACCCCTAGGTTACTATGTGAGCCTGTGCTATGGTTaGCATTCAATTTTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: HNSWYVQSRHPSPLGYYVSLCYG*HSIFLN
Trigger: GTTCAGGAAAATTGAATGCAAACCATAGCACAGGCT...CACATAGTAACCTAGGGGTGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAATACCTGTAGGACCTTaGCCCAGTACATCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPIPVGP*PSTSLG
Trigger: GCCCAGAGATGTACTGGGCAAAGGTCCTACAGGTAT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618088.4
CDS TCA 90 bp GTTATCAGAGGAGCAAGGCTGGAGATCTCAACAAGGGGTGAAGTGTaGATTTATCTTCCCAATATGGACTCCCTGGGTCTGCCAATCCAA +
Preference number: 5 (lower is better)
Translates to: VIRGARLEISTRGEV*IYLPNMDSLGLPIQ
Trigger: TTGGATTGGCAGACCCAGGGAGTCCATATTGGGAAGATAAATTCACACTTCACCCCTTGTTGAGATCTCCAGCCTTGCTCCTCTGATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505006.1
ENST00000615111.4
CDS TCA 90 bp AAAACTGGTTATCAGAGGAGCAAGGCTGGAGATCTCAACAAGGGGTaGAGTGTGAATTTATCTTCCCAATATGGACTCCCTGGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: KTGYQRSKAGDLNKG*SVNLSSQYGLPGSA
Trigger: GGCAGACCCAGGGAGTCCATATTGGGAAGATAAATTCACACTTCACCCCTTGTTGAGATCTCCAGCCTTGCTCCTCTGATAACCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505006.1
CDS GCA 90 bp GGGGTGAAGTGTGAATTTATCTTCCCAATATGGACTCCCTGGGTCTaGCAATCCAAAGAGGTGACCTTGGTCATGGAAGATTTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: GVKCEFIFPIWTPWV*QSKEVTLVMEDLQN
Trigger: GTTCTGCAAATCTTCCATGACCAAGGTCACCTCTTTGGATTGGCAGACCCAGGGAGTCCATATTGGGAAGATAAATTCACACTTCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505006.1
ENST00000615111.4
CDS GCA 90 bp TCTATGGGCAAAGGCATCTTTCATAAACAGGTTGGTCTGGGCTCCTaGCACTCTGTGTCTCGTTTCCAAGCTCACTCTTCAATTTCCATC +
Preference number: 5 (lower is better)
Translates to: SMGKGIFHKQVGLGS*HSVSRFQAHSSISI
Trigger: GATGGAAATTGAAGAGTGAGCTTGGAAACGAGACACAGAGTGGCAGGAGCCCAGACCAACCTGTTTATGAAAGATGCCTTTGCCCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505006.1
CDS CCA 90 bp GAGGTGACCTTGGTCATGGAAGATTTGCAGAACAAATCTTGCCTGTaGACTTGCACCCAGAAGGCACTTGTAGGTAGTCAATGCAGAATC +
Preference number: 5 (lower is better)
Translates to: EVTLVMEDLQNKSCL*TCTQKALVGSQCRI
Trigger: GATTCTGCATTGACTACCTACAAGTGCCTTCTGGGTGCAAGTCCACAGGCAAGATTTGTTCTGCAAATCTTCCATGACCAAGGTCACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505006.1
ENST00000615111.4
CDS CCA 90 bp TGGAGATCTCAACAAGGGGTGAAGTGTGAATTTATCTTCCCAATATaGACTCCCTGGGTCTGCCAATCCAAAGAGGTGACCTTGGTCATG +
Preference number: 5 (lower is better)
Translates to: WRSQQGVKCEFIFPI*TPWVCQSKEVTLVM
Trigger: CATGACCAAGGTCACCTCTTTGGATTGGCAGACCCAGGGAGTCCATATTGGGAAGATAAATTCACACTTCACCCCTTGTTGAGATCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505006.1
ENST00000615111.4
CDS CCA 90 bp TCCACAAAGGAATCTTCTCAGAAGGTTCTGGGCTATTCACACCTCTaGCCCTGCTGCCTCCTATACTCTTCTCACTTAATCCATCTTTGC +
Preference number: 5 (lower is better)
Translates to: STKESSQKVLGYSHL*PCCLLYSSHLIHLC
Trigger: GCAAAGATGGATTAAGTGAGAAGAGTATAGGAGGCAGCAGGGCCAGAGGTGTGAATAGCCCAGAACCTTCTGAGAAGATTCCTTTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612626.4
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACAGAAAAAGCATCACTaGATCCTGCCAGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPQKKHH*ILPVPR
Trigger: CCTTGGCACTGGCAGGATCAAGTGATGCTTTTTCTG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp GAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTATTCTTTTGGTGGGTCCTAGGTTCTTaGTACCATGATGAACCTCAT +
Preference number: 5 (lower is better)
Translates to: ETISGCMSHWDIPALFFWWVLGS*YHDEPH
Trigger: ATGAGGTTCATCATGGTACAAAGAACCTAGGACCCA...CCAAAAGAATAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CAA 90 bp CACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCACCCCTAGGTTACTATGTGTTCTTCACATGTAAATaGGCTCATCTGAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: HNSWYVQSRHPSPLGYYVFFTCK*AHLRKC
Trigger: ACACTTCCTCAGATGAGCCAATTTACATGTGAAGAA...CACATAGTAACCTAGGGGTGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CTCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACACCCTGCCTTATTCTTTaGGCCCGGGGAAAGGACCAC +
Preference number: 5 (lower is better)
Translates to: LMYVIGIEISLQNVRFTTPCLIL*ARGKDH
Trigger: GTGGTCCTTTCCCCGGGCCAAAAGAATAAGGCAGGG...TGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCACCCCTAGGTTACTATGTGACAATCATTTTAGAATaGTTGAAGGAGTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: HNSWYVQSRHPSPLGYYVTIILE*LKESGE
Trigger: CTCCCCAGACTCCTTCAACAATTCTAAAATGATTGT...CACATAGTAACCTAGGGGTGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CAA 90 bp TGGCAGAGTGAGACCATTTCCGGGTGCATGTCACATTGGGACATCCCTGCCTTAGGCATCAACCAAGATTaGGTGAAGAAAGGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: WQSETISGCMSHWDIPALGINQD*VKKGFL
Trigger: AAGAAAACCTTTCTTCACCAAATCTTGGTTGATGCC...TAAGGCAGGGATGTCCCAATGTGACATGCACCCGGAAATGGTCTCACTCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS TCA 90 bp TTATCTTCCCAATATGGACTCCCTGGGTCTGCCAATCCAAAGAGGTaGCCTTGGTCATGGAAGATTTGCAGAACAAATCTTGCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: LSSQYGLPGSANPKR*PWSWKICRTNLACG
Trigger: TCCACAGGCAAGATTTGTTCTGCAAATCTTCCATGACCAAGGTCACCTCTTTGGATTGGCAGACCCAGGGAGTCCATATTGGGAAGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505006.1
ENST00000615111.4
CDS GCA 90 bp AAGGAATCTTCTCAGAAGGTTCTGGGCTATTCACACCTCTGGCCCTaGTGCCTCCTATACTCTTCTCACTTAATCCATCTTTGCTACTCA +
Preference number: 5 (lower is better)
Translates to: KESSQKVLGYSHLWP*CLLYSSHLIHLCYS
Trigger: TGAGTAGCAAAGATGGATTAAGTGAGAAGAGTATAGGAGGCAGCAGGGCCAGAGGTGTGAATAGCCCAGAACCTTCTGAGAAGATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612626.4
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGCCTGGATTAACACTTaGCAGACTCCAGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISAWINT*QTPGCS
Trigger: AGAGCACCCTGGAGTCTGCAAAGTGTTAATCCAGGC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCAGGTGAACGGCACTaGGTGAATTTAGGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSGERH*VNLGSL
Trigger: TAAGGAGCCTAAATTCACCAAGTGCCGTTCACCTGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp TCTCCAGAATGTCAGGTTCACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCAGCATTCTTTCCATTCTaGAGTCCATTCTTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: SPECQVHNSWYVQSRHPSAFFPF*SPFLSV
Trigger: AACACTCAAGAATGGACTCAAGAATGGAAAGAATGC...TGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTGAACCTGACATTCTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTCAGTAAAGTCCAGTaGAGGGCAATGGGTGGATCT +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPFSKVQ*RAMGGS
Trigger: AGATCCACCCATTGCCCTCAACTGGACTTTACTGAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGCTTCCCATCTCACTaGGATATCTGCATGAATCCC +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPCFPSH*DICMNP
Trigger: GGGATTCATGCAGATATCCAAGTGAGATGGGAAGCA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACCAGAGTTTCGTTGTTaGGATCTCACACGCACTTCA +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPPEFRC*DLTRTS
Trigger: TGAAGTGCGTGTGAGATCCAAACAACGAAACTCTGG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp GAGTATGAGGCCCTGTGGGGACTGTACTATATGAATGGAGGTATAGTCTGGGACGGAAGTGGTTGTGGTTaGTTTTTCTCTGCTTGGATA +
Preference number: 5 (lower is better)
Translates to: EYEALWGLYYMNGGIVWDGSGCG*FFSAWI
Trigger: TATCCAAGCAGAGAAAAACAAACCACAACCACTTCC...GTCCCAGACTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCATACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCGGGTGCATGTCACATaGGGACATCCCTGCCTTATT +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISRVHVT*GHPCLI
Trigger: AATAAGGCAGGGATGTCCCAATGTGACATGCACCCG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGTAGCAAAACCAAGTaGGGTGTGAACAGATTCCGC +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPCSKTK*GVNRFR
Trigger: GCGGAATCTGTTCACACCCAACTTGGTTTTGCTACA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CACAACAGCTGGTACGTCCAGAGTCGCCATCCTTCACCCCTAGGTTACTATGTGTTGGCTATAGAAATGTaGTCAGGCTGTTGTGAAATA +
Preference number: 5 (lower is better)
Translates to: HNSWYVQSRHPSPLGYYVLAIEM*SGCCEI
Trigger: TATTTCACAACAGCCTGACAACATTTCTATAGCCAA...CACATAGTAACCTAGGGGTGAAGGATGGCGACTCTGGACGTACCAGCTGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCCAAAGAGGTGACCTaGGTCATGGAAGATTTGCAG +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSKEVT*VMEDLQ
Trigger: CTGCAAATCTTCCATGACCAAGGTCACCTCTTTGGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR CAA 90 bp CTTTCTAATCTCAGAGCCTTGGTAGGTAGGGGTAGTATGCAGCAGCAGAAAGAACATGCTTCCTTCAAGTaGGTGAGCTTCTCTACTCTG +
Preference number: 5 (lower is better)
Translates to: LSNLRALVGRGSMQQQKEHASFK*VSFSTL
Trigger: CAGAGTAGAGAAGCTCACCAACTTGAAGGAAGCATG...TTCTTTCTGCTGCTGCATACTACCCCTACCTACCAAGGCTCTGAGATTAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS TCA 90 bp CTCATATATGCAAGCAGATCACATCACACTGATTTGGTTAAAATCTaGCAGAGAGGGAGGGGTTGGAGGTGGGATCCCACAGAAGTTTCT +
Preference number: 5 (lower is better)
Translates to: LIYASRSHHTDLVKI*QRGRGWRWDPTEVS
Trigger: AGAAACTTCTGTGGGATCCCACCTCCAACCCCTCCCTCTCTGTCAGATTTTAACCAAATCAGTGTGATGTGATCTGCTTGCATATATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS-3UTR CAA 90 bp CCCAGTCAATTCTTTGCTATTAAATACGTAGCTCTTGGGAAACCAAAGAAAGGCGCCTGGATTAACACTTaGCAGACTCCAGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: PSQFFAIKYVALGKPKKGAWINT*QTPGCS
Trigger: AGAGCACCCTGGAGTCTGCAAAGTGTTAATCCAGGC...GCCTTTCTTTGGTTTCCCAAGAGCTACGTATTTAATAGCAAAGAATTGACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGGGTCCTAGGTTCTTaGTACCATGATGAACCTCAT +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPWVLGS*YHDEPH
Trigger: ATGAGGTTCATCATGGTACAAAGAACCTAGGACCCA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAATTTCCAGAGTTTCGTaGTTTGGATCTCACACGCAC +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPISRVS*FGSHTH
Trigger: GTGCGTGTGAGATCCAAACAACGAAACTCTGGAAAT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACCCTCATGTATGTCATaGGCATTGAAATCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPPSCMS*ALKSVS
Trigger: GGAGACTGATTTCAATGCCAATGACATACATGAGGG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTTGTAGCAAAACCAAGTaGGGTGTGAACAGATTCCGC +
Preference number: 5 (lower is better)
Translates to: PSPLGYYVISHGHCLEVCCSKTK*GVNRFR
Trigger: GCGGAATCTGTTCACACCCAACTTGGTTTTGCTACA...ACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS GCA 90 bp ACCTTGGTCATGGAAGATTTGCAGAACAAATCTTGCCTGTGGACTTaGACCCAGAAGGCACTTGTAGGTAGTCAATGCAGAATCCAAAAA +
Preference number: 5 (lower is better)
Translates to: TLVMEDLQNKSCLWT*TQKALVGSQCRIQK
Trigger: TTTTTGGATTCTGCATTGACTACCTACAAGTGCCTTCTGGGTGCAAGTCCACAGGCAAGATTTGTTCTGCAAATCTTCCATGACCAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505006.1
ENST00000615111.4
CDS CCA 90 bp CTTGAGTCCATTCTTGAGTGTTCCTTCTGGTATAGAACAGCTGTATaGGTCCTAGGTTCTTTGTACCATGATGAACCTCATCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: LESILECSFWYRTAV*VLGSLYHDEPHLSS
Trigger: ACTGGACAGATGAGGTTCATCATGGTACAAAGAACCTAGGACCCATACAGCTGTTCTATACCAGAAGGAACACTCAAGAATGGACTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCAGGTGAACGGCACTaGGTGAATTTAGGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSGERH*VNLGSL
Trigger: TAAGGAGCCTAAATTCACCAAGTGCCGTTCACCTGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCCACTGTACCACCATaGCTAGTTAGCTTGATACAA +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSTVPP*LVSLIQ
Trigger: TTGTATCAAGCTAACTAGCAATGGTGGTACAGTGGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAAATGGGTGGATCTGGTaGCACTATTTCATCAACAGA +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPNGWIW*HYFINR
Trigger: TCTGTTGATGAAATAGTGCAACCAGATCCACCCATT...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTCAGTAAAGTCCAGTaGAGGGCAATGGGTGGATCT +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISFSKVQ*RAMGGS
Trigger: AGATCCACCCATTGCCCTCAACTGGACTTTACTGAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGCTTCCCATCTCACTaGGATATCTGCATGAATCCC +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISCFPSH*DICMNP
Trigger: GGGATTCATGCAGATATCCAAGTGAGATGGGAAGCA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCCAGAGTTTCGTTGTTaGGATCTCACACGCACTTCA +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISPEFRC*DLTRTS
Trigger: TGAAGTGCGTGTGAGATCCAAACAACGAAACTCTGG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp ATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCTGGTACCAGAGTTTCGTTGTTaGGATCTCACACGCACTTCA +
Preference number: 5 (lower is better)
Translates to: MSLALKSVSRMSGSQQLVPEFRC*DLTRTS
Trigger: TGAAGTGCGTGTGAGATCCAAACAACGAAACTCTGG...TACCAGCTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGCCAGAGTTTCGTTGTTaGGATCTCACACGCACTTCA +
Preference number: 5 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLPEFRC*DLTRTS
Trigger: TGAAGTGCGTGTGAGATCCAAACAACGAAACTCTGG...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGGAAGTGGTTGTGGTTaGTTTTTCTCTGCTTGGATA +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPGSGCG*FFSAWI
Trigger: TATCCAAGCAGAGAAAAACAAACCACAACCACTTCC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTCAGTAGGAAGTGGTaGTGGTTTGTTTTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPFSRKW*WFVFLC
Trigger: GCAGAGAAAAACAAACCACAACCACTTCCTACTGAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTCAGCACTTAAGTATCTaGGTCAGTGTGAACCAGCTA +
Preference number: 5 (lower is better)
Translates to: PSPLGYYVISHGHCLEVCQHLSI*VSVNQL
Trigger: TAGCTGGTTCACACTGACCAAGATACTTAAGTGCTG...ACAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTGGTCATGGAAGATTaGCAGAACAAATCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPLVMED*QNKSCL
Trigger: CAGGCAAGATTTGTTCTGCAAATCTTCCATGACCAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS-3UTR CAA 90 bp CATAAGTTCTCTAAGCTCCAGTTTTCCCGTAAGATCCTTTTGCCAAGAGCAAAGTCTAATCTCAGAGCCTaGGTAGGTAGGGGTAGTATG +
Preference number: 5 (lower is better)
Translates to: HKFSKLQFSRKILLPRAKSNLRA*VGRGSM
Trigger: CATACTACCCCTACCTACCAAGGCTCTGAGATTAGA...CTTTGCTCTTGGCAAAAGGATCTTACGGGAAAACTGGAGCTTAGAGAACTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGGCTGGATTTTCGTATaGTTTCCTCCAGGCTTTATA +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPGWIFV*FPPGFI
Trigger: TATAAAGCCTGGAGGAAACAATACGAAAATCCAGCC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS CCA 90 bp CAGGGCATTCTTTCCATTCTTGAGTCCATTCTTGAGTGTTCCTTCTaGTATAGAACAGCTGTATGGGTCCTAGGTTCTTTGTACCATGAT +
Preference number: 5 (lower is better)
Translates to: QGILSILESILECSF*YRTAVWVLGSLYHD
Trigger: ATCATGGTACAAAGAACCTAGGACCCATACAGCTGTTCTATACCAGAAGGAACACTCAAGAATGGACTCAAGAATGGAAAGAATGCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGTCAGGTGAACGGCACTaGGTGAATTTAGGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQSGERH*VNLGSL
Trigger: TAAGGAGCCTAAATTCACCAAGTGCCGTTCACCTGA...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGGGTCCTAGGTTCTTaGTACCATGATGAACCTCAT +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISWVLGS*YHDEPH
Trigger: ATGAGGTTCATCATGGTACAAAGAACCTAGGACCCA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCAGCATTCTTTCCATTCTaGAGTCCATTCTTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPAFFPF*SPFLSV
Trigger: AACACTCAAGAATGGACTCAAGAATGGAAAGAATGC...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTATTTCCAGAGTTTCGTaGTTTGGATCTCACACGCAC +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISISRVS*FGSHTH
Trigger: GTGCGTGTGAGATCCAAACAACGAAACTCTGGAAAT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTCTTCACATGTAAATaGGCTCATCTGAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPFFTCK*AHLRKC
Trigger: ACACTTCCTCAGATGAGCCAATTTACATGTGAAGAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATCTAATTTTCCTTCCTaGAGGAGATCTGGATCGATT +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPSNFPS*RRSGSI
Trigger: AATCGATCCAGATCTCCTCAAGGAAGGAAAATTAGA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACATGAATGGCTAAGATaGTGTTCACCTCCTCTAATT +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPHEWLR*CSPPLI
Trigger: AATTAGAGGAGGTGAACACAATCTTAGCCATTCATG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGTATGTCATTGGCATaGAAATCAGTCTCCAGAATG +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPCMSLA*KSVSRM
Trigger: CATTCTGGAGACTGATTTCAATGCCAATGACATACA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCCCTCATGTATGTCATaGGCATTGAAATCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISPSCMS*ALKSVS
Trigger: GGAGACTGATTTCAATGCCAATGACATACATGAGGG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp TCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTTCAGTAGGAAGTGGTaGTGGTTTGTTTTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: SFTPRLLCDFSWSLLRSLFSRKW*WFVFLC
Trigger: GCAGAGAAAAACAAACCACAACCACTTCCTACTGAA...CAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCACATAAAAGTCGATGTTaGACAGTGAACTTGGATTGC +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPHKSRC*TVNLDC
Trigger: GCAATCCAAGTTCACTGTCAAACATCGACTTTTATG...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp TCACCTGGGCATAAAAGTCGATGTTTGACAGTGAACTTGGATTGCTTAGCTGAATTGGTGCCTGGTAAGTaGATCTGTGCAAACGCTTTA +
Preference number: 5 (lower is better)
Translates to: SPGHKSRCLTVNLDCLAELVPGK*ICANAL
Trigger: TAAAGCGTTTGCACAGATCAACTTACCAGGCACCAA...TTCAGCTAAGCAATCCAAGTTCACTGTCAAACATCGACTTTTATGCCCAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCCCACAGAAGTTTCTaGGTTACCACTTGGCATGTA +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSHRSF*VTTWHV
Trigger: TACATGCCAAGTGGTAACCAAGAAACTTCTGTGGGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS CCA 90 bp CCCAAGAGTCATCACTGTGGAATTCGGGTTTATAGCTATCATGAATaGCTAAGATTGTGTTCACCTCCTCTAATTTTCCTTCCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PKSHHCGIRVYSYHE*LRLCSPPLIFLPLL
Trigger: CAGCAAAGGAAGGAAAATTAGAGGAGGTGAACACAATCTTAGCCATTCATGATAGCTATAAACCCGAATTCCACAGTGATGACTCTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCCACTGTACCACCATaGCTAGTTAGCTTGATACAA +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSTVPP*LVSLIQ
Trigger: TTGTATCAAGCTAACTAGCAATGGTGGTACAGTGGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGTCCACTGTACCACCATaGCTAGTTAGCTTGATACAA +
Preference number: 5 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLSTVPP*LVSLIQ
Trigger: TTGTATCAAGCTAACTAGCAATGGTGGTACAGTGGA...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTAATGGGTGGATCTGGTaGCACTATTTCATCAACAGA +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISNGWIW*HYFINR
Trigger: TCTGTTGATGAAATAGTGCAACCAGATCCACCCATT...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CCCAGTCAATTCTTTGCTATTAAATACGTAGCTCTTGGGAAACCAAAGAAAGGCATTTCCAGAGTTTCGTaGTTTGGATCTCACACGCAC +
Preference number: 5 (lower is better)
Translates to: PSQFFAIKYVALGKPKKGISRVS*FGSHTH
Trigger: GTGCGTGTGAGATCCAAACAACGAAACTCTGGAAAT...GCCTTTCTTTGGTTTCCCAAGAGCTACGTATTTAATAGCAAAGAATTGACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CCCAGTCAATTCTTTGCTATTAAATACGTAGCTCTTGGGAAACCAAAGAAAGGCCCCTCATGTATGTCATaGGCATTGAAATCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: PSQFFAIKYVALGKPKKGPSCMS*ALKSVS
Trigger: GGAGACTGATTTCAATGCCAATGACATACATGAGGG...GCCTTTCTTTGGTTTCCCAAGAGCTACGTATTTAATAGCAAAGAATTGACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGGAAGTGGTTGTGGTTaGTTTTTCTCTGCTTGGATA +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISGSGCG*FFSAWI
Trigger: TATCCAAGCAGAGAAAAACAAACCACAACCACTTCC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTCAGTAGGAAGTGGTaGTGGTTTGTTTTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISFSRKW*WFVFLC
Trigger: GCAGAGAAAAACAAACCACAACCACTTCCTACTGAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATGTTTGACAGTGAACTaGGATTGCTTAGCTGAATAT +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPCLTVN*DCLAEY
Trigger: ATATTCAGCTAAGCAATCCAAGTTCACTGTCAAACA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CATCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTTGCTTTTACTTCTTTaGGTGCCTGGTAAGTTGATC +
Preference number: 5 (lower is better)
Translates to: HPSPLGYYVISHGHCLEVLLLLL*VPGKLI
Trigger: GATCAACTTACCAGGCACCAAAAGAAGTAAAAGCAA...GACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS-3UTR CAA 90 bp AAGTTGGGTGTGAACAGATTCCGCTGCAGAGGCTATAGATCTTATCTCTCACCATTGGCTATAGAAATGTaGTCAGGCTGTTGTGAAATA +
Preference number: 5 (lower is better)
Translates to: KLGVNRFRCRGYRSYLSPLAIEM*SGCCEI
Trigger: TATTTCACAACAGCCTGACAACATTTCTATAGCCAA...TGGTGAGAGATAAGATCTATAGCCTCTGCAGCGGAATCTGTTCACACCCAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CTAAGCTCCAGTTTTCCCGTAAGATCCTTTTGCCAAGAGCAAAGAGTGGAAAAATCCCAGCTGTGCAACTaGCTAGTAATGTTACATAAG +
Preference number: 5 (lower is better)
Translates to: LSSSFPVRSFCQEQRVEKSQLCN*LVMLHK
Trigger: CTTATGTAACATTACTAGCAAGTTGCACAGCTGGGA...TTTTTCCACTCTTTGCTCTTGGCAAAAGGATCTTACGGGAAAACTGGAGCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTGCATTCTTTCCATTCTaGAGTCCATTCTTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISAFFPF*SPFLSV
Trigger: AACACTCAAGAATGGACTCAAGAATGGAAAGAATGC...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CCCAGTCAATTCTTTGCTATTAAATACGTAGCTCTTGGGAAACCAAAGAAAGGCAATGGGTGGATCTGGTaGCACTATTTCATCAACAGA +
Preference number: 5 (lower is better)
Translates to: PSQFFAIKYVALGKPKKGNGWIW*HYFINR
Trigger: TCTGTTGATGAAATAGTGCAACCAGATCCACCCATT...GCCTTTCTTTGGTTTCCCAAGAGCTACGTATTTAATAGCAAAGAATTGACTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTCTTCACATGTAAATaGGCTCATCTGAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISFFTCK*AHLRKC
Trigger: ACACTTCCTCAGATGAGCCAATTTACATGTGAAGAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTCTAATTTTCCTTCCTaGAGGAGATCTGGATCGATT +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISSNFPS*RRSGSI
Trigger: AATCGATCCAGATCTCCTCAAGGAAGGAAAATTAGA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
CDS-3UTR CAA 90 bp CTTTTTGGCATCTGCCTCACAGAAGTAGGCATTGTCCATAAGGAAGTTTTCTTGTCTAATTTTCCTTCCTaGAGGAGATCTGGATCGATT +
Preference number: 5 (lower is better)
Translates to: LFGICLTEVGIVHKEVFLSNFPS*RRSGSI
Trigger: AATCGATCCAGATCTCCTCAAGGAAGGAAAATTAGA...CAAGAAAACTTCCTTATGGACAATGCCTACTTCTGTGAGGCAGATGCCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR CAA 90 bp TCACCTGGGCATAAAAGTCGATGTTTGACAGTGAACTTGGATTGCTTAGCTGAACATGAATGGCTAAGATaGTGTTCACCTCCTCTAATT +
Preference number: 5 (lower is better)
Translates to: SPGHKSRCLTVNLDCLAEHEWLR*CSPPLI
Trigger: AATTAGAGGAGGTGAACACAATCTTAGCCATTCATG...TTCAGCTAAGCAATCCAAGTTCACTGTCAAACATCGACTTTTATGCCCAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCATGAATGGCTAAGATaGTGTTCACCTCCTCTAATT +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISHEWLR*CSPPLI
Trigger: AATTAGAGGAGGTGAACACAATCTTAGCCATTCATG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGTATGTCATTGGCATaGAAATCAGTCTCCAGAATG +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISCMSLA*KSVSRM
Trigger: CATTCTGGAGACTGATTTCAATGCCAATGACATACA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGGGAAGTGGTTGTGGTTaGTTTTTCTCTGCTTGGATA +
Preference number: 5 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQGSGCG*FFSAWI
Trigger: TATCCAAGCAGAGAAAAACAAACCACAACCACTTCC...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CTCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACATTCAGTAGGAAGTGGTaGTGGTTTGTTTTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LMYVIGIEISLQNVRFTTFSRKW*WFVFLC
Trigger: GCAGAGAAAAACAAACCACAACCACTTCCTACTGAA...TGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp TCCTTCACCCCTAGGTTACTATGTGATTTCTCATGGTCACTGCTTAGAAGTCTGTGTTTGACAGTGAACTaGGATTGCTTAGCTGAATAT +
Preference number: 5 (lower is better)
Translates to: SFTPRLLCDFSWSLLRSLCLTVN*DCLAEY
Trigger: ATATTCAGCTAAGCAATCCAAGTTCACTGTCAAACA...CAGACTTCTAAGCAGTGACCATGAGAAATCACATAGTAACCTAGGGGTGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTCATAAAAGTCGATGTTaGACAGTGAACTTGGATTGC +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISHKSRC*TVNLDC
Trigger: GCAATCCAAGTTCACTGTCAAACATCGACTTTTATG...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGTTCTTCACATGTAAATaGGCTCATCTGAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQFFTCK*AHLRKC
Trigger: ACACTTCCTCAGATGAGCCAATTTACATGTGAAGAA...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp TCATGTATGTCATTGGCATTGAAATCAGTCTCCAGAATGTCAGGTTCACAACAGCATGAATGGCTAAGATaGTGTTCACCTCCTCTAATT +
Preference number: 5 (lower is better)
Translates to: SCMSLALKSVSRMSGSQQHEWLR*CSPPLI
Trigger: AATTAGAGGAGGTGAACACAATCTTAGCCATTCATG...CTGTTGTGAACCTGACATTCTGGAGACTGATTTCAATGCCAATGACATACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511135.5
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTGTTTGACAGTGAACTaGGATTGCTTAGCTGAATAT +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISCLTVN*DCLAEY
Trigger: ATATTCAGCTAAGCAATCCAAGTTCACTGTCAAACA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTGGCTATAGAAATGTaGTCAGGCTGTTGTGAAATA +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISLAIEM*SGCCEI
Trigger: TATTTCACAACAGCCTGACAACATTTCTATAGCCAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS-3UTR CAA 90 bp CTAGCTGGATTTCAGTTTGAATCCCAGCTGTGCAACTTGCTAGTAATGTTACATTACTCTGCATTAGGCTaGCATGTAAGACTCCATTTT +
Preference number: 5 (lower is better)
Translates to: LAGFQFESQLCNLLVMLHYSALG*HVRLHF
Trigger: AAAATGGAGTCTTACATGCAAGCCTAATGCAGAGTA...ATGTAACATTACTAGCAAGTTGCACAGCTGGGATTCAAACTGAAATCCAGCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR CAA 90 bp CGTGCAATTGCAGCACTTAAGTATCTTGGTCAGTGTGAACCAGCTATGATTTCTTTCTGGTTAAAGAAGTaGCTCATTTTAACCCAGTTC +
Preference number: 5 (lower is better)
Translates to: RAIAALKYLGQCEPAMISFWLKK*LILTQF
Trigger: GAACTGGGTTAAAATGAGCAACTTCTTTAACCAGAA...AGAAATCATAGCTGGTTCACACTGACCAAGATACTTAAGTGCTGCAATTGCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS TCA 90 bp TGTCTCGTTTCCAAGCTCACTCTTCAATTTCCATCCAACATTTCTTaGATAAATTTCGTTCTCTTGGAAGTAGGTATTTCAGAGCCTCAC +
Preference number: 5 (lower is better)
Translates to: CLVSKLTLQFPSNIS*INFVLLEVGISEPH
Trigger: GTGAGGCTCTGAAATACCTACTTCCAAGAGAACGAAATTTATTCAAGAAATGTTGGATGGAAATTGAAGAGTGAGCTTGGAAACGAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505006.1
CDS TCA 90 bp AAGCTAGATTTCCTTGTAATTTCATTCATGCTTCCTTCAAGTTGGTaGGCTTCTCTACTCTGCATTAGGCTTGCATGTAAGACTCCATTT +
Preference number: 5 (lower is better)
Translates to: KLDFLVISFMLPSSW*ASLLCIRLACKTPF
Trigger: AAATGGAGTCTTACATGCAAGCCTAATGCAGAGTAGAGAAGCTCACCAACTTGAAGGAAGCATGAATGAAATTACAAGGAAATCTAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513671.5
CDS-3UTR CAA 90 bp ATTCGGGTTTATAGCTATCATGAATGGCTAAGATTGTGTTCACCTCCTCTAATTCATAAAAGTCGATGTTaGACAGTGAACTTGGATTGC +
Preference number: 5 (lower is better)
Translates to: IRVYSYHEWLRLCSPPLIHKSRC*TVNLDC
Trigger: GCAATCCAAGTTCACTGTCAAACATCGACTTTTATG...AATTAGAGGAGGTGAACACAATCTTAGCCATTCATGATAGCTATAAACCCGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS-3UTR CAA 90 bp ATTCGGGTTTATAGCTATCATGAATGGCTAAGATTGTGTTCACCTCCTCTAATTTGTTTGACAGTGAACTaGGATTGCTTAGCTGAATAT +
Preference number: 5 (lower is better)
Translates to: IRVYSYHEWLRLCSPPLICLTVN*DCLAEY
Trigger: ATATTCAGCTAAGCAATCCAAGTTCACTGTCAAACA...AATTAGAGGAGGTGAACACAATCTTAGCCATTCATGATAGCTATAAACCCGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS GCA 72 bp CGCCGCCACCGCCACTGTAGCAGCTGCTGCTGCCGCTaGCGCCGCCGCCGCCGCTCCCTAGCCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: RRHRHCSSCCCR*RRRRRSLALLL
Trigger: GAGGAGGAGGGCTAGGGAGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCTGCTACAGTGGCGGTGGCGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 72 bp AGCTTCGCCTCTGATCAGAGAGCGCGGGTTCGCGTCTaGGCTGGGGCCAATGGTGCCGGGGCCTCCGGCCCG +
Preference number: 6 (lower is better)
Translates to: SFASDQRARVRV*AGANGAGASGP
Trigger: CGGGCCGGAGGCCCCGGCACCATTGGCCCCAGCGCAGACGCGAACCCGCGCTCTCTGATCAGAGGCGAAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 72 bp TGCGGCCCGCACAAACGCGCAAAAGACCGCGCGCTCTaGGCGCTGTGTCCACGCGCACAGCTCGACCTCCCC +
Preference number: 6 (lower is better)
Translates to: CGPHKRAKDRAL*ALCPRAQLDLP
Trigger: GGGGAGGTCGAGCTGTGCGCGTGGACACAGCGCGCAGAGCGCGCGGTCTTTTGCGCGTTTGTGCGGGCCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS CCA 72 bp AAGGCGGCCACCGTTCACCAGGGGTCACGCCGCGCCTaGCCCGCAGTCCCCCAGATCCAGGTTGCAGAAGCG +
Preference number: 6 (lower is better)
Translates to: KAATVHQGSRRA*PAVPQIQVAEA
Trigger: CGCTTCTGCAACCTGGATCTGGGGGACTGCGGGCCAGGCGCGGCGTGACCCCTGGTGAACGGTGGCCGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 72 bp ACGCCGCGCCTGGCCCGCAGTCCCCCAGATCCAGGTTaGAGAAGCGAAGGCGAAGCGGACGTTCAAGGAGGC +
Preference number: 6 (lower is better)
Translates to: TPRLARSPPDPG*RSEGEADVQGG
Trigger: GCCTCCTTGAACGTCCGCTTCGCCTTCGCTTCTGCAACCTGGATCTGGGGGACTGCGGGCCAGGCGCGGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS CAA 72 bp CACGCCGCGCCTGGCCCGCAGTCCCCCAGATCCAGGTaGCAGAAGCGAAGGCGAAGCGGACGTTCAAGGAGG +
Preference number: 6 (lower is better)
Translates to: HAAPGPQSPRSR*QKRRRSGRSRR
Trigger: CCTCCTTGAACGTCCGCTTCGCCTTCGCTTCTGCAACCTGGATCTGGGGGACTGCGGGCCAGGCGCGGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS CAA 90 bp ACCAGGGGTCACGCCGCGCCTGGCCCGCAGTCCCCCAGATCCAGGTaGCAGAAGCGAAGGCGAAGCGGACGTTCAAGGAGGCCAGTTCGA +
Preference number: 6 (lower is better)
Translates to: TRGHAAPGPQSPRSR*QKRRRSGRSRRPVR
Trigger: TCGAACTGGCCTCCTTGAACGTCCGCTTCGCCTTCGCTTCTGCAACCTGGATCTGGGGGACTGCGGGCCAGGCGCGGCGTGACCCCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 72 bp GGAGGCCAGTTCGAGAACTGCTGCGGAGAGGCCGAGTaGCGCCCGGGCCAAGCATTCCGAGTTGCTGGGATG +
Preference number: 6 (lower is better)
Translates to: GGQFENCCGEAE*RPGQAFRVAGM
Trigger: CATCCCAGCAACTCGGAATGCTTGGCCCGGGCGGCACTCGGCCTCTCCGCAGCAGTTCTCGAACTGGCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 72 bp CTACTGACCCCAGTTCCATCGGTGCCAACGTGCGGCTaGGGCCCGCACAAACGCGCAAAAGACCGCGCGCTC +
Preference number: 6 (lower is better)
Translates to: LLTPVPSVPTCG*GPHKRAKDRAL
Trigger: GAGCGCGCGGTCTTTTGCGCGTTTGTGCGGGCCGCAGCCGCACGTTGGCACCGATGGAACTGGGGTCAGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS CCA 72 bp GGCCGAGTGCCGCCCGGGCCAAGCATTCCGAGTTGCTaGGATGAAGTCTTCCCGGCGAGGAGCTGGAGTTGG +
Preference number: 6 (lower is better)
Translates to: GRVPPGPSIPSC*DEVFPARSWSW
Trigger: CCAACTCCAGCTCCTCGCCGGGAAGACTTCATCCCAGCAACTCGGAATGCTTGGCCCGGGCGGCACTCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 72 bp AGAGGCCGAGTGCCGCCCGGGCCAAGCATTCCGAGTTaGTGGGATGAAGTCTTCCCGGCGAGGAGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: RGRVPPGPSIPS*WDEVFPARSWS
Trigger: ACTCCAGCTCCTCGCCGGGAAGACTTCATCCCAGCAACTCGGAATGCTTGGCCCGGGCGGCACTCGGCCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS TCA 72 bp AGTGCCGCCCGGGCCAAGCATTCCGAGTTGCTGGGATaGAGTCTTCCCGGCGAGGAGCTGGAGTTGGTGCGT +
Preference number: 6 (lower is better)
Translates to: SAARAKHSELLG*SLPGEELELVR
Trigger: ACGCACCAACTCCAGCTCCTCGCCGGGAAGACTTCATCCCAGCAACTCGGAATGCTTGGCCCGGGCGGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS TCA 72 bp GAGATCCATACCTGTAGGACCTCCGAGCTTCGCCTCTaGTCAGAGAGCGCGGGTTCGCGTCTGCGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: EIHTCRTSELRL*SESAGSRLRWG
Trigger: GCCCCAGCGCAGACGCGAACCCGCGCTCTCTGATCAGAGGCGAAGCTCGGAGGTCCTACAGGTATGGATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 72 bp GTCACTCTACTGACCCCAGTTCCATCGGTGCCAACGTaGGGCTGCGGCCCGCACAAACGCGCAAAAGACCGC +
Preference number: 6 (lower is better)
Translates to: VTLLTPVPSVPT*GCGPHKRAKDR
Trigger: GCGGTCTTTTGCGCGTTTGTGCGGGCCGCAGCCGCACGTTGGCACCGATGGAACTGGGGTCAGTAGAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615111.4
ENST00000620156.4
CDS GCA 72 bp TCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCTCCGAGCTTC +
Preference number: 6 (lower is better)
Translates to: SLDPASAKVNSS*QRSIPVGPPSF
Trigger: GAAGCTCGGAGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230882.9
CDS GCA 72 bp TCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCCCAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: SLDPASAKVNSS*QRSIPVGPQAH
Trigger: ATGAGCCTGGGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537449.5
CDS GCA 72 bp TCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCCCAGTTCATG +
Preference number: 6 (lower is better)
Translates to: SLDPASAKVNSS*QRSIPVGPQFM
Trigger: CATGAACTGGGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513671.5
ENST00000620156.4
CDS GCA 72 bp TCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCAATAGTCCGG +
Preference number: 6 (lower is better)
Translates to: SLDPASAKVNSS*QRSIPVGPIVR
Trigger: CCGGACTATTGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS GCA 72 bp TCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCTTTGCCCAGT +
Preference number: 6 (lower is better)
Translates to: SLDPASAKVNSS*QRSIPVGPLPS
Trigger: ACTGGGCAAAGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618088.4
CDS GCA 72 bp TCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCTGGTTATCAG +
Preference number: 6 (lower is better)
Translates to: SLDPASAKVNSS*QRSIPVGPGYQ
Trigger: CTGATAACCAGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS CAA 90 bp CCCTGGGTCTGCCAATCCAAAGAGGTGACCTTGGTCATGGAAGATTaGCAGAACAAATCTTGCCTGTGGACTTGCACCCAGAAGGCACTT +
Preference number: 6 (lower is better)
Translates to: PWVCQSKEVTLVMED*QNKSCLWTCTQKAL
Trigger: AAGTGCCTTCTGGGTGCAAGTCCACAGGCAAGATTTGTTCTGCAAATCTTCCATGACCAAGGTCACCTCTTTGGATTGGCAGACCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505006.1
ENST00000615111.4
CDS GCA 72 bp TCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCCTTTGCAAAT +
Preference number: 6 (lower is better)
Translates to: SLDPASAKVNSS*QRSIPVGPFAN
Trigger: ATTTGCAAAGGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505006.1
CDS GCA 72 bp TCACTTGATCCTGCCAGTGCCAAGGTCAACAGCAGCTaGCAGAGATCCATACCTGTAGGACCTTATCTTCCA +
Preference number: 6 (lower is better)
Translates to: SLDPASAKVNSS*QRSIPVGPYLP
Trigger: TGGAAGATAAGGTCCTACAGGTATGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612626.4
CDS TCA 72 bp GCAAGCAGATCACATCACACTGATTTGGTTAAAATCTaGCAGAGAGGGAGGGGTTGGAGGTGGGATCCCACA +
Preference number: 6 (lower is better)
Translates to: ASRSHHTDLVKI*QRGRGWRWDPT
Trigger: TGTGGGATCCCACCTCCAACCCCTCCCTCTCTGTCAGATTTTAACCAAATCAGTGTGATGTGATCTGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS GCA 72 bp CAGAAGGTTCTGGGCTATTCACACCTCTGGCCCTGCTaGCTCCTATACTCTTCTCACTTAATCCATCTTTGC +
Preference number: 6 (lower is better)
Translates to: QKVLGYSHLWPC*LLYSSHLIHLC
Trigger: GCAAAGATGGATTAAGTGAGAAGAGTATAGGAGGCAGCAGGGCCAGAGGTGTGAATAGCCCAGAACCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612626.4
CDS CAA 90 bp TTGGAAGTAGGTATTTCAGAGCCTCACTTCCAGAAAAAGCATCACTaGATCCTGCCAGTGCCAAGGTCAACAGCAGCTGCCAGAGATCCA +
Preference number: 6 (lower is better)
Translates to: LEVGISEPHFQKKHH*ILPVPRSTAAARDP
Trigger: TGGATCTCTGGCAGCTGCTGTTGACCTTGGCACTGGCAGGATCAAGTGATGCTTTTTCTGGAAGTGAGGCTCTGAAATACCTACTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505006.1
CDS GCA 72 bp AAAGGCATCTTTCATAAACAGGTTGGTCTGGGCTCCTaGCACTCTGTGTCTCGTTTCCAAGCTCACTCTTCA +
Preference number: 6 (lower is better)
Translates to: KGIFHKQVGLGS*HSVSRFQAHSS
Trigger: TGAAGAGTGAGCTTGGAAACGAGACACAGAGTGGCAGGAGCCCAGACCAACCTGTTTATGAAAGATGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505006.1
CDS CCA 72 bp CAACAAGGGGTGAAGTGTGAATTTATCTTCCCAATATaGACTCCCTGGGTCTGCCAATCCAAAGAGGTGACC +
Preference number: 6 (lower is better)
Translates to: QQGVKCEFIFPI*TPWVCQSKEVT
Trigger: GGTCACCTCTTTGGATTGGCAGACCCAGGGAGTCCATATTGGGAAGATAAATTCACACTTCACCCCTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505006.1
ENST00000615111.4
CDS CAA 72 bp TGCCAATCCAAAGAGGTGACCTTGGTCATGGAAGATTaGCAGAACAAATCTTGCCTGTGGACTTGCACCCAG +
Preference number: 6 (lower is better)
Translates to: CQSKEVTLVMED*QNKSCLWTCTQ
Trigger: CTGGGTGCAAGTCCACAGGCAAGATTTGTTCTGCAAATCTTCCATGACCAAGGTCACCTCTTTGGATTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505006.1
ENST00000615111.4
CDS CAA 90 bp TCTGTCCAGTGGCATGAAAAAGTCTCTCGCTCAGGTGAACGGCACTaGGTGAATTTAGGCTCCTTAGAAGAATTTGTCTTTAGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: SVQWHEKVSRSGERH*VNLGSLEEFVFRPG
Trigger: TCCAGGCCTAAAGACAAATTCTTCTAAGGAGCCTAAATTCACCAAGTGCCGTTCACCTGAGCGAGAGACTTTTTCATGCCACTGGACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS CCA 72 bp CATACCTGTAGGACCTGGTTATCAGAGGAGCAAGGCTaGAGATCTCAACAAGGGGTGAAGTGTGAATTTATC +
Preference number: 6 (lower is better)
Translates to: HTCRTWLSEEQG*RSQQGVKCEFI
Trigger: GATAAATTCACACTTCACCCCTTGTTGAGATCTCCAGCCTTGCTCCTCTGATAACCAGGTCCTACAGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615111.4
CDS CAA 90 bp TCTGTCCAGTGGCATGAAAAAGTCTCTCGCTCAGGTGAACGGCACTaGGTGAATTTAGGCTCCTTAGAAGAATCCTCACTTCCAGAAAAA +
Preference number: 6 (lower is better)
Translates to: SVQWHEKVSRSGERH*VNLGSLEESSLPEK
Trigger: TTTTTCTGGAAGTGAGGATTCTTCTAAGGAGCCTAAATTCACCAAGTGCCGTTCACCTGAGCGAGAGACTTTTTCATGCCACTGGACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357703.6
CDS CAA 90 bp CTGACAGAGAGGGAGGGGTTGGAGGTGGGATCCCACAGAAGTTTCTaGGTTACCACTTGGCATGTATTAATCTCTAAATTCTTGGTCTTT +
Preference number: 6 (lower is better)
Translates to: LTEREGLEVGSHRSF*VTTWHVLISKFLVF
Trigger: AAAGACCAAGAATTTAGAGATTAATACATGCCAAGTGGTAACCAAGAAACTTCTGTGGGATCCCACCTCCAACCCCTCCCTCTCTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS TCA 72 bp CAATATGGACTCCCTGGGTCTGCCAATCCAAAGAGGTaGCCTTGGTCATGGAAGATTTGCAGAACAAATCTT +
Preference number: 6 (lower is better)
Translates to: QYGLPGSANPKR*PWSWKICRTNL
Trigger: AAGATTTGTTCTGCAAATCTTCCATGACCAAGGTCACCTCTTTGGATTGGCAGACCCAGGGAGTCCATATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505006.1
ENST00000615111.4
CDS TCA 72 bp TATCAGAGGAGCAAGGCTGGAGATCTCAACAAGGGGTaGAGTGTGAATTTATCTTCCCAATATGGACTCCCT +
Preference number: 6 (lower is better)
Translates to: YQRSKAGDLNKG*SVNLSSQYGLP
Trigger: AGGGAGTCCATATTGGGAAGATAAATTCACACTTCACCCCTTGTTGAGATCTCCAGCCTTGCTCCTCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505006.1
ENST00000615111.4
CDS GCA 72 bp TGTGAATTTATCTTCCCAATATGGACTCCCTGGGTCTaGCAATCCAAAGAGGTGACCTTGGTCATGGAAGAT +
Preference number: 6 (lower is better)
Translates to: CEFIFPIWTPWV*QSKEVTLVMED
Trigger: ATCTTCCATGACCAAGGTCACCTCTTTGGATTGGCAGACCCAGGGAGTCCATATTGGGAAGATAAATTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505006.1
ENST00000615111.4
CDS CAA 72 bp AGGGAGGGGTTGGAGGTGGGATCCCACAGAAGTTTCTaGGTTACCACTTGGCATGTATTAATCTCTAAATTC +
Preference number: 6 (lower is better)
Translates to: REGLEVGSHRSF*VTTWHVLISKF
Trigger: GAATTTAGAGATTAATACATGCCAAGTGGTAACCAAGAAACTTCTGTGGGATCCCACCTCCAACCCCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS CAA 90 bp GAGTGTTCCTTCTGGTATAGAACAGCTGTATGGGTCCTAGGTTCTTaGTACCATGATGAACCTCATCTGTCCAGTGGCATGAAAAAGTCT +
Preference number: 6 (lower is better)
Translates to: ECSFWYRTAVWVLGS*YHDEPHLSSGMKKS
Trigger: AGACTTTTTCATGCCACTGGACAGATGAGGTTCATCATGGTACAAAGAACCTAGGACCCATACAGCTGTTCTATACCAGAAGGAACACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS CCA 72 bp CACTCATATATGCAAGCAGATCACATCACACTGATTTaGTTAAAATCTGACAGAGAGGGAGGGGTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: HSYMQADHITLI*LKSDREGGVGG
Trigger: ACCTCCAACCCCTCCCTCTCTGTCAGATTTTAACCAAATCAGTGTGATGTGATCTGCTTGCATATATGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS CAA 72 bp TGGCATGAAAAAGTCTCTCGCTCAGGTGAACGGCACTaGGTGAATTTAGGCTCCTTAGAAGAATTTGTCTTT +
Preference number: 6 (lower is better)
Translates to: WHEKVSRSGERH*VNLGSLEEFVF
Trigger: AAAGACAAATTCTTCTAAGGAGCCTAAATTCACCAAGTGCCGTTCACCTGAGCGAGAGACTTTTTCATGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230882.9
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS CAA 90 bp GCTGTTTTCCCCAGCAGAAACATAATCAGGGCATTCTTTCCATTCTaGAGTCCATTCTTGAGTGTTCCTTCTGGTATAGAACAGCTGTAT +
Preference number: 6 (lower is better)
Translates to: AVFPSRNIIRAFFPF*SPFLSVPSGIEQLY
Trigger: ATACAGCTGTTCTATACCAGAAGGAACACTCAAGAATGGACTCAAGAATGGAAAGAATGCCCTGATTATGTTTCTGCTGGGGAAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS CAA 90 bp GCTGTTTTCCCCAGCAGAAACATAATCAGGGCATTCTTTCCATTCTaGAGTCCATTCTTGAGTGTTCTTGTCTTTAGGCCTGGATTAACA +
Preference number: 6 (lower is better)
Translates to: AVFPSRNIIRAFFPF*SPFLSVLVFRPGLT
Trigger: TGTTAATCCAGGCCTAAAGACAAGAACACTCAAGAATGGACTCAAGAATGGAAAGAATGCCCTGATTATGTTTCTGCTGGGGAAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS CCA 72 bp ATTCTTGAGTGTTCCTTCTGGTATAGAACAGCTGTATaGGTCCTAGGTTCTTTGTACCATGATGAACCTCAT +
Preference number: 6 (lower is better)
Translates to: ILECSFWYRTAV*VLGSLYHDEPH
Trigger: ATGAGGTTCATCATGGTACAAAGAACCTAGGACCCATACAGCTGTTCTATACCAGAAGGAACACTCAAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS CCA 72 bp GAGGTGGGATCCCACAGAAGTTTCTTGGTTACCACTTaGCATGTATTAATCTCTAAATTCTTGGTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: EVGSHRSFLVTT*HVLISKFLVFL
Trigger: CAGAAAGACCAAGAATTTAGAGATTAATACATGCCAAGTGGTAACCAAGAAACTTCTGTGGGATCCCACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612382.4
CDS CAA 72 bp ATAATCAGGGCATTCTTTCCATTCTTGAGTCCATTCTaGAGTGTTCCTTCTGGTATAGAACAGCTGTATGGG +
Preference number: 6 (lower is better)
Translates to: IIRAFFPFLSPF*SVPSGIEQLYG
Trigger: CCCATACAGCTGTTCTATACCAGAAGGAACACTCAAGAATGGACTCAAGAATGGAAAGAATGCCCTGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS CAA 72 bp CCCAGCAGAAACATAATCAGGGCATTCTTTCCATTCTaGAGTCCATTCTTGAGTGTTCCTTCTGGTATAGAA +
Preference number: 6 (lower is better)
Translates to: PSRNIIRAFFPF*SPFLSVPSGIE
Trigger: TTCTATACCAGAAGGAACACTCAAGAATGGACTCAAGAATGGAAAGAATGCCCTGATTATGTTTCTGCTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230882.9
ENST00000357703.6
ENST00000537449.5
ENST00000612382.4
ENST00000612626.4
ENST00000615111.4
ENST00000618088.4
ENST00000620156.4
ENST00000622294.2
CDS CAA 72 bp GGAATTCGGGTTTATAGCTATCATGAATGGCTAAGATaGTGTTCACCTCCTCTAATTTTCCTTCCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: GIRVYSYHEWLR*CSPPLIFLPLL
Trigger: CAGCAAAGGAAGGAAAATTAGAGGAGGTGAACACAATCTTAGCCATTCATGATAGCTATAAACCCGAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2
CDS CAA 72 bp ATAATCAGGGCATTCTTTCCATTCTTGAGTCCATTCTaGAGTGTTCTTGTCTTTAGGCCTGGATTAACACTT +
Preference number: 6 (lower is better)
Translates to: IIRAFFPFLSPF*SVLVFRPGLTL
Trigger: AAGTGTTAATCCAGGCCTAAAGACAAGAACACTCAAGAATGGACTCAAGAATGGAAAGAATGCCCTGATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511135.5
CDS CAA 90 bp CATCACTGTGGAATTCGGGTTTATAGCTATCATGAATGGCTAAGATaGTGTTCACCTCCTCTAATTTTCCTTCCTTTGCTGTTTAGAAAA +
Preference number: 6 (lower is better)
Translates to: HHCGIRVYSYHEWLR*CSPPLIFLPLLFRK
Trigger: TTTTCTAAACAGCAAAGGAAGGAAAATTAGAGGAGGTGAACACAATCTTAGCCATTCATGATAGCTATAAACCCGAATTCCACAGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622294.2