RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GHDC (Homo sapiens)

Ensembl gene IDs: ENSG00000167925

Ensembl transcript IDs: ENST00000301671.12, ENST00000414034.7, ENST00000428494.6, ENST00000585375.1, ENST00000585735.1, ENST00000586692.5, ENST00000587427.6, ENST00000588352.5, ENST00000588762.5, ENST00000590249.5, ENST00000590520.5, ENST00000593209.5

Found 587 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCTGGGCGGTGGGGCAGGACTTGACTCAGGACACCACCCTCTCCTaGAGACACTGGGCCAGGTGCCTGTGCCGAAGGACCCGGGGCATC +
Preference number: 1 (lower is better)
Translates to: SWAVGQDLTQDTTLS*RHWARCLCRRTRGI
Trigger: GATGCCCCGGGTCCTTCGGCACAGGCACCTGGCCCAGTGTCTGCAGGAGAGGGTGGTGTCCTGAGTCAAGTCCTGCCCCACCGCCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR TCA 90 bp ACCCAGCAAGGTGGCCTGCAGAGAGGCCTCCCCAAGGTCCTGGTTTaGGGTCGGGGGCAGTGGCTGCTCTCCACTGTCTTCCTGCTGGGT +
Preference number: 1 (lower is better)
Translates to: TQQGGLQRGLPKVLV*GRGQWLLSTVFLLG
Trigger: ACCCAGCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGCCTCTCTGCAGGCCACCTTGCTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
3UTR GCA 90 bp AGAGAGGCCTCCCCAAGGTCCTGGTTTGAGGTCGGGGGCAGTGGCTaGTCTCCACTGTCTTCCTGCTGGGTCTGGCTGGCCTTGGTCAGA +
Preference number: 1 (lower is better)
Translates to: REASPRSWFEVGGSG*SPLSSCWVWLALVR
Trigger: TCTGACCAAGGCCAGCCAGACCCAGCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGCCTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
3UTR GCA 90 bp CCCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGGATGTaGCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGCAGCCTTGCC +
Preference number: 1 (lower is better)
Translates to: PFPTAEVVCGCWPRM*HESSKAPVCACSLA
Trigger: GGCAAGGCTGCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR CCA 90 bp GCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTaGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTCAGC +
Preference number: 1 (lower is better)
Translates to: AVSFMPGHGDTGRHC*HLLTPEAHTSEPVS
Trigger: GCTGACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR GCA 90 bp CTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTaGTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTC +
Preference number: 1 (lower is better)
Translates to: LAVSFMPGHGDTGRH*WHLLTPEAHTSEPV
Trigger: GACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR GCA 90 bp GGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTaGGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAA +
Preference number: 1 (lower is better)
Translates to: GCWPRMCHESSKAPV*ACSLARPRAECWGK
Trigger: TTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR TCA 90 bp GTGGGGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATaGGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGG +
Preference number: 1 (lower is better)
Translates to: VGKRGKGEPPQEVHE*VGYCCGQLGLHPAG
Trigger: CCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR TCA 90 bp GGGAGTGGGGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATaGATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGC +
Preference number: 1 (lower is better)
Translates to: GSGEEREGRAPAGST*MSGLLLRATGTPSC
Trigger: GCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCCCCACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR GCA 90 bp TGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATaGAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTG +
Preference number: 1 (lower is better)
Translates to: WPRMCHESSKAPVCA*SLARPRAECWGKVL
Trigger: CAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR CCA 90 bp TGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTCAGCTaGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATG +
Preference number: 1 (lower is better)
Translates to: WHLLTPEAHTSEPVS*AKASLRPSGSHGQM
Trigger: CATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR TCA 90 bp CAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCAGGTaGCACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGA +
Preference number: 1 (lower is better)
Translates to: QGLSKAQRLSWANVR*HRVRDPGQGLPIRR
Trigger: TCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGACATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR CCA 90 bp GGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTaGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATC +
Preference number: 1 (lower is better)
Translates to: GREGRESPRRKYMNE*VTAAGNWDSILLGI
Trigger: GATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR CCA 90 bp AGTAATAGCTCTCCCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTaGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCA +
Preference number: 1 (lower is better)
Translates to: SNSSPFPTAEVVCGC*PRMCHESSKAPVCA
Trigger: TGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGGGAGAGCTATTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR TCA 90 bp CCAGATGGTCTCCGGAGTTGCTTCCTGCGGCGATGCCTTATGATGTaGAGTAATAGCTCTCCCTTCCCCACCGCAGAAGTGGTTTGTGGG +
Preference number: 1 (lower is better)
Translates to: PDGLRSCFLRRCLMM*SNSSPFPTAEVVCG
Trigger: CCCACAAACCACTTCTGCGGTGGGGAAGGGAGAGCTATTACTTCACATCATAAGGCATCGCCGCAGGAAGCAACTCCGGAGACCATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR GCA 90 bp GGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTaGTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAG +
Preference number: 1 (lower is better)
Translates to: GHPLRVYVEYTSELS*SRTMKLRSCSLLTQ
Trigger: CTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR GCA 90 bp CCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCGCAGGCAGCGAGGGCTaGCCGGAGTGCTCGGAAGGC +
Preference number: 2 (lower is better)
Translates to: PGHGDTGRHCWHLLTPEAAGSEG*PECSEG
Trigger: GCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGC...GGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR-3UTR TCA 90 bp AGCAGCAGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTACCCAAGGTCCTGGTTTaGGGTCGGGGGCAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: SSRALGSLVPGVPTWPRVPKVLV*GRGQWL
Trigger: CAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGG...TACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
3UTR-3UTR GCA 90 bp CAGTGCGTCCAGCAGCAGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGTCGGGGGCAGTGGCTaGTCTCCACTGTCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: QCVQQQGPRVLGSRGAHLVGGSG*SPLSSC
Trigger: GCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGAC...CAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCTGGACGCACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
3UTR-3UTR GCA 90 bp GGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTTGGCAGGGCCCACGCTaGCCCAGAACCGCAGGGACT +
Preference number: 2 (lower is better)
Translates to: GQALLASANPGGPYFRTGWQGPR*PRTAGT
Trigger: AGTCCCTGCGGTTCTGGGGCAGCGTGGGCCCTGCCA...ACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR-3UTR GCA 90 bp TCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATGGGCCAGGTGCCTGTaGCGAAGGACCCGGGGCATC +
Preference number: 2 (lower is better)
Translates to: SSSVLHAGTWGHGQALLAWARCL*RRTRGI
Trigger: GATGCCCCGGGTCCTTCGGCACAGGCACCTGGCCCA...TGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR-3UTR GCA 90 bp AGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCAGCGTCACACGGGCAGTaGGTCCCTGAGCCAGCACTT +
Preference number: 2 (lower is better)
Translates to: RALGSLVPGVPTWPRVFPASHGQ*VPEPAL
Trigger: AAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGC...TGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
3UTR-3UTR CCA 90 bp CCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCTCAGAACCGGTCAGCTaGGCCAAGGCCTCTCTAAGG +
Preference number: 2 (lower is better)
Translates to: PGHGDTGRHCWHLLTPEASEPVS*AKASLR
Trigger: CCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGA...GGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp AGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCAGCCTCCCCAAGGTCCTaGTTTGAGGTCGGGGGCAGT +
Preference number: 2 (lower is better)
Translates to: RALGSLVPGVPTWPRVFPASPRS*FEVGGS
Trigger: ACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGC...TGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588762.5
3UTR-3UTR GCA 90 bp GAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCTGCGGAGGGCTGCCCGGAGTaGTCGGAAGGCTCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: EGRESPRRKYMNEWVTAAEGCPE*SEGSLP
Trigger: GGGCAGGGAGCCTTCCGAGCACTCCGGGCAGCCCTC...CGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR-3UTR CCA 90 bp GAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCTGCGCCCTGCCCCACCAGGTaGACTCTGGCAGGGCCCACG +
Preference number: 2 (lower is better)
Translates to: EGRESPRRKYMNEWVTAAPCPTR*TLAGPT
Trigger: CGTGGGCCCTGCCAGAGTCCACCTGGTGGGGCAGGG...CGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR-3UTR CCA 90 bp AGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCACCTGCTGGGTCTGGCTaGCCTTGGTCAGAGGGAGAT +
Preference number: 2 (lower is better)
Translates to: RALGSLVPGVPTWPRVFPPAGSG*PWSEGD
Trigger: ATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGG...TGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
3UTR-3UTR GCA 90 bp GAGTGGGGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGTGGCAGGGCCCACGCTaGCCCAGAACCGCAGGGACT +
Preference number: 2 (lower is better)
Translates to: EWGREGRESPRRKYMNEWWQGPR*PRTAGT
Trigger: AGTCCCTGCGGTTCTGGGGCAGCGTGGGCCCTGCCA...CCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCCCCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR-3UTR GCA 90 bp GGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTGGAGACACTGGGCCAGGTaGCTGTGCCGAAGGACCCGG +
Preference number: 2 (lower is better)
Translates to: GARGLFGSHPRKPKAGEWRHWAR*LCRRTR
Trigger: CCGGGTCCTTCGGCACAGGCACCTGGCCCAGTGTCT...CCACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR-3UTR CCA 90 bp TCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCACTTCATGCCGGGACATaGGGACACGGGCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: SSSVLHAGTWGHGQALLALHAGT*GHGQAL
Trigger: CAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAG...TGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp GGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTCCAGAGTCAGAGACCCTaGCCAAGGACTCCCCATCCG +
Preference number: 2 (lower is better)
Translates to: GRHCWHLLTPEAHTSEPVQSQRP*PRTPHP
Trigger: CGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTG...GACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR TCA 90 bp AGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGGCTTGCCCAGTGCACTaGCTGAGCACACAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: SGLLLRATGTPSCWASSEACPVH*LSTQLW
Trigger: CCACAGCTGTGTGCTCAGTCAGTGCACTGGGCAAGC...CTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp GAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCTGCGACGGGCAGGCACTGCTaGCATCTGCTAACCCCGGAG +
Preference number: 2 (lower is better)
Translates to: EGRESPRRKYMNEWVTAATGRHC*HLLTPE
Trigger: CTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGT...CGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp GAGTGGGGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGCTTCATGCCGGGACATaGGGACACGGGCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: EWGREGRESPRRKYMNEWLHAGT*GHGQAL
Trigger: CAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAG...CCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp GAGTGGGGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGACTGCTGCGGGCAACTaGGACTCCATCCTGCTGGGC +
Preference number: 2 (lower is better)
Translates to: EWGREGRESPRRKYMNEWTAAGN*DSILLG
Trigger: GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGT...CCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR TCA 90 bp GGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGTGGGCAAATGTCAGGTaGCACAGAGTCAGAGACCCT +
Preference number: 2 (lower is better)
Translates to: GPYFRTGQLGQGLSKAQRWANVR*HRVRDP
Trigger: AGGGTCTCTGACTCTGTGTCACCTGACATTTGCCCA...CCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR TCA 90 bp TGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCTGGGCAAATGTCAGGTaGCACAGAGTCAGAGACCCT +
Preference number: 2 (lower is better)
Translates to: WGHGQALLASANPGGPYFWANVR*HRVRDP
Trigger: AGGGTCTCTGACTCTGTGTCACCTGACATTTGCCCA...GAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR TCA 90 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCTGGGCAAATGTCAGGTaGCACAGAGTCAGAGACCCT +
Preference number: 2 (lower is better)
Translates to: SFMPGHGDTGRHCWHLLTWANVR*HRVRDP
Trigger: AGGGTCTCTGACTCTGTGTCACCTGACATTTGCCCA...GGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR GCA 90 bp GGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTGGACTGGGACTCCATCCTaGTGGGCATCCTCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: GARGLFGSHPRKPKAGEWTGTPS*WASSES
Trigger: ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGT...CCACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR GCA 90 bp CTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGCAGTGGCAGGCAGCGAGGGCTaGCCGGAGTGCTCGGAAGGC +
Preference number: 2 (lower is better)
Translates to: LWAVIQETIGVHGNSLAVAGSEG*PECSEG
Trigger: GCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGC...CACTGCTAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR-3UTR GCA 90 bp GGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGACACCACCCTCTCCTaGAGACACTGGGCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: GREGRESPRRKYMNEWVTDTTLS*RHWARC
Trigger: GCACCTGGCCCAGTGTCTGCAGGAGAGGGTGGTGTC...AGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR-3UTR CCA 90 bp ATCGGTGTGCATGGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTaGCATCTGCTAACCCCGGAG +
Preference number: 2 (lower is better)
Translates to: IGVHGNSLAVSFMPGHGDTGRHC*HLLTPE
Trigger: CTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGT...GTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACCATGCACACCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp TACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATCTCTCCTGCAGACACTaGGCCAGGTGCCTGTGCCGA +
Preference number: 2 (lower is better)
Translates to: YCCGQLGLHPAGHPLRVYLSCRH*ARCLCR
Trigger: TCGGCACAGGCACCTGGCCCAGTGTCTGCAGGAGAG...ATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR-3UTR TCA 90 bp TGTTTAGGGCTGCCAGACCCAGCAAGGTGGCCTGCAGAGAGGCCTCCCCAAGGTTTGGTCAGAGGGAGATaGTTCCGGAAGGTGCTTATG +
Preference number: 2 (lower is better)
Translates to: CLGLPDPARWPAERPPQGLVRGR*FRKVLM
Trigger: CATAAGCACCTTCCGGAATCATCTCCCTCTGACCAA...ACCTTGGGGAGGCCTCTCTGCAGGCCACCTTGCTGGGTCTGGCAGCCCTAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
3UTR-3UTR GCA 90 bp TCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGGTTGCGACACCACCCTCTCCTaGAGACACTGGGCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: SCSRTMKLRSCSLLTQGCDTTLS*RHWARC
Trigger: GCACCTGGCCCAGTGTCTGCAGGAGAGGGTGGTGTC...GCAACCCTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR-3UTR CCA 90 bp AAGTACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGCAGAGTCAGAGACCCTaGCCAAGGACTCCCCATCCG +
Preference number: 2 (lower is better)
Translates to: KYMNEWVTAAGNWDSILLQSQRP*PRTPHP
Trigger: CGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTG...CAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp ACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACACTGCTGCGGGCAACTaGGACTCCATCCTGCTGGGC +
Preference number: 2 (lower is better)
Translates to: TREPLWAVIQETIGVHGNTAAGN*DSILLG
Trigger: GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGT...GTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR GCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGACACGGGCAGGCACTaGTGGCATCTGCTAACCCCG +
Preference number: 2 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLDTGRH*WHLLTP
Trigger: CGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTC...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR GCA 90 bp GTTTCCTCATTAGTATGGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTGCTCCTGTGTGCGCATaGAGCCTTGCCAGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: VSSLVWNSEPRWSPELLPAPVCA*SLARPR
Trigger: TCTGGGCCTGGCAAGGCTGCATGCGCACACAGGAGC...AGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCCATACTAATGAGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR-3UTR CCA 90 bp ACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACCAGAGTCAGAGACCCTaGCCAAGGACTCCCCATCCG +
Preference number: 2 (lower is better)
Translates to: TREPLWAVIQETIGVHGNQSQRP*PRTPHP
Trigger: CGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTG...GTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp GAATTGTCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGCTTCATGCCGGGACATaGGGACACGGGCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: ELSCSRTMKLRSCSLLTQLHAGT*GHGQAL
Trigger: CAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAG...CTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGACAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTACTTCATGCCGGGACATaGGGACACGGGCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLLHAGT*GHGQAL
Trigger: CAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAG...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp CCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCACGGGCAGGCACTGCTaGCATCTGCTAACCCCGGAG +
Preference number: 2 (lower is better)
Translates to: PAGHPLRVYVEYTSELSCTGRHC*HLLTPE
Trigger: CTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGT...GCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCACAGAGTCAGAGACCCTaGCCAAGGACTCCCCATCCG +
Preference number: 2 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSQSQRP*PRTPHP
Trigger: CGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTG...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR GCA 90 bp GTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAATGAAGCTGAGGGACACGGGCAGGCACTaGTGGCATCTGCTAACCCCG +
Preference number: 2 (lower is better)
Translates to: VYVEYTSELSCSRTMKLRDTGRH*WHLLTP
Trigger: CGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTC...CCTCAGCTTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTACTGAGCACACAGCTGTaGCCACCAGAGAACCTCTTT +
Preference number: 2 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLLSTQL*PPENLF
Trigger: AAAGAGGTTCTCTGGTGGCCACAGCTGTGTGCTCAG...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR TCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCATGGGCAAATGTCAGGTaGCACAGAGTCAGAGACCCT +
Preference number: 2 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSWANVR*HRVRDP
Trigger: AGGGTCTCTGACTCTGTGTCACCTGACATTTGCCCA...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCACTGAGCACACAGCTGTaGCCACCAGAGAACCTCTTT +
Preference number: 2 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSLSTQL*PPENLF
Trigger: AAAGAGGTTCTCTGGTGGCCACAGCTGTGTGCTCAG...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAAGTACATGAATGAGTaGGTTACTGCTGCGGGCAAC +
Preference number: 2 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSKYMNE*VTAAGN
Trigger: GTTGCCCGCAGCAGTAACCCACTCATTCATGTACTT...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR GCA 72 bp GCAGCGAGGGCTGCCCGGAGTGCTCGGAAGGCTCCCTaGCCCACCAGGTGGACTCTGGCAGGGCCCACGCTG +
Preference number: 3 (lower is better)
Translates to: AARAARSARKAP*PTRWTLAGPTL
Trigger: CAGCGTGGGCCCTGCCAGAGTCCACCTGGTGGGGCAGGGAGCCTTCCGAGCACTCCGGGCAGCCCTCGCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR CCA 72 bp AGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTaGCCCAGGGTATTCCCAGGCCAAGGCAGGGGTCGG +
Preference number: 3 (lower is better)
Translates to: RALGSLVPGVPT*PRVFPGQGRGR
Trigger: CCGACCCCTGCCTTGGCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588762.5
3UTR-3UTR CAA 90 bp GAGGGGCAGGCAGCGAGGGCTGCCCGGAGTGCTCGGAAGGCTCCCTGCCCCACCAGGCAGTGGTCCAGCTaGTCTCGATTTTCCTCTGAC +
Preference number: 3 (lower is better)
Translates to: EGQAARAARSARKAPCPTRQWSS*SRFSSD
Trigger: GTCAGAGGAAAATCGAGACAAGCTGGACCACTGCCT...GGTGGGGCAGGGAGCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR TCA 72 bp GGTGGCCTGCAGAGAGGCCTCCCCAAGGTCCTGGTTTaGGGTCGGGGGCAGTGGCTGCTCTCCACTGTCTTC +
Preference number: 3 (lower is better)
Translates to: GGLQRGLPKVLV*GRGQWLLSTVF
Trigger: GAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGCCTCTCTGCAGGCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
3UTR GCA 72 bp GTGGGGCAGGACTTGACTCAGGACACCACCCTCTCCTaGAGACACTGGGCCAGGTGCCTGTGCCGAAGGACC +
Preference number: 3 (lower is better)
Translates to: VGQDLTQDTTLS*RHWARCLCRRT
Trigger: GGTCCTTCGGCACAGGCACCTGGCCCAGTGTCTGCAGGAGAGGGTGGTGTCCTGAGTCAAGTCCTGCCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR CCA 72 bp AGCAAGGTGGCCTGCAGAGAGGCCTCCCCAAGGTCCTaGTTTGAGGTCGGGGGCAGTGGCTGCTCTCCACTG +
Preference number: 3 (lower is better)
Translates to: SKVACREASPRS*FEVGGSGCSPL
Trigger: CAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGCCTCTCTGCAGGCCACCTTGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
3UTR-3UTR CAA 90 bp CTGGGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGGCGGTGGGGCAGGACTaGACTCAGGACACCACCCTC +
Preference number: 3 (lower is better)
Translates to: LGARGLFGSHPRKPKAGEAVGQD*TQDTTL
Trigger: GAGGGTGGTGTCCTGAGTCAAGTCCTGCCCCACCGC...CTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414034.7
3UTR GCA 72 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTaGTGGCATCTGCTAACCCCGGAGGCCCATACTTCA +
Preference number: 3 (lower is better)
Translates to: SFMPGHGDTGRH*WHLLTPEAHTS
Trigger: TGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR GCA 72 bp ACCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGGATGTaGCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGC +
Preference number: 3 (lower is better)
Translates to: TAEVVCGCWPRM*HESSKAPVCAC
Trigger: GCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTCTGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR GCA 72 bp AGCTCTCCCTTCCCCACCGCAGAAGTGGTTTGTGGGTaGTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCT +
Preference number: 3 (lower is better)
Translates to: SSPFPTAEVVCG*WPRMCHESSKA
Trigger: AGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGGGAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR CCA 72 bp TTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTaGCATCTGCTAACCCCGGAGGCCCATACTTCAGAA +
Preference number: 3 (lower is better)
Translates to: FMPGHGDTGRHC*HLLTPEAHTSE
Trigger: TTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR CCA 72 bp TCTCCCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTaGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCT +
Preference number: 3 (lower is better)
Translates to: SPFPTAEVVCGC*PRMCHESSKAP
Trigger: AGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR-3UTR CAA 90 bp GAAGTGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTTGTGCGCATGCAGCCTaGCCAGGCCCAGAGCAGAAT +
Preference number: 3 (lower is better)
Translates to: EVVCGCWPRMCHESSKAPCAHAA*PGPEQN
Trigger: ATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACA...AGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR TCA 72 bp TCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCAGGTaGCACAGAGTCAGAGACCCTGGCCAAGGACTCCCC +
Preference number: 3 (lower is better)
Translates to: SKAQRLSWANVR*HRVRDPGQGLP
Trigger: GGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGACATTTGCCCATGAGAGCCGCTGGGCCTTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR TCA 72 bp AGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATaGGTGGGTTACTGCTGCGGGCAACTGGGACTCCAT +
Preference number: 3 (lower is better)
Translates to: RGKGEPPQEVHE*VGYCCGQLGLH
Trigger: ATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR TCA 72 bp GAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATaGATGAGTGGGTTACTGCTGCGGGCAACTGGGACT +
Preference number: 3 (lower is better)
Translates to: EEREGRAPAGST*MSGLLLRATGT
Trigger: AGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR-3UTR CAA 90 bp TTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTAAGGTCCTGCTCCTTATaGACTCAGGGTTGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: LLLRATGTPSCWASSESLRSCSL*TQGCCS
Trigger: GGAGCAGCAACCCTGAGTCAATAAGGAGCAGGACCT...TAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR TCA 72 bp CTCCGGAGTTGCTTCCTGCGGCGATGCCTTATGATGTaGAGTAATAGCTCTCCCTTCCCCACCGCAGAAGTG +
Preference number: 3 (lower is better)
Translates to: LRSCFLRRCLMM*SNSSPFPTAEV
Trigger: CACTTCTGCGGTGGGGAAGGGAGAGCTATTACTTCACATCATAAGGCATCGCCGCAGGAAGCAACTCCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR TCA 72 bp ATGGTCTCCGGAGTTGCTTCCTGCGGCGATGCCTTATaGTGTGAAGTAATAGCTCTCCCTTCCCCACCGCAG +
Preference number: 3 (lower is better)
Translates to: MVSGVASCGDAL*CEVIALPSPPQ
Trigger: CTGCGGTGGGGAAGGGAGAGCTATTACTTCACATCATAAGGCATCGCCGCAGGAAGCAACTCCGGAGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR CCA 72 bp ACTGAGCACACAGCTGTGGCCACCAGAGAACCTCTTTaGGCTGTGATACAGGAAACCATCGGTGTGCATGGT +
Preference number: 3 (lower is better)
Translates to: TEHTAVATREPL*AVIQETIGVHG
Trigger: ACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGTGGCCACAGCTGTGTGCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR GCA 72 bp GAATTGTCCTGCTCAAGGACAATGAAGCTGAGGTCCTaGTCCTTATTGACTCAGGGTTGCTGCTCCTGGGGA +
Preference number: 3 (lower is better)
Translates to: ELSCSRTMKLRS*SLLTQGCCSWG
Trigger: TCCCCAGGAGCAGCAACCCTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGACAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
3UTR CCA 72 bp TGCGTTTCCTCATTAGTATGGAACAGTGAACCCAGATaGTCTCCGGAGTTGCTTCCTGCGGCGATGCCTTAT +
Preference number: 3 (lower is better)
Translates to: CVSSLVWNSEPR*SPELLPAAMPY
Trigger: ATAAGGCATCGCCGCAGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCCATACTAATGAGGAAACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
3UTR-3UTR CAA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGCAGTGGTCCAGCTaGTCTCGATTTTCCTCTGAC +
Preference number: 3 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSRQWSS*SRFSSD
Trigger: GTCAGAGGAAAATCGAGACAAGCTGGACCACTGCCT...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
3UTR-3UTR CAA 90 bp CATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAAGGTCCTGCTCCTTATaGACTCAGGGTTGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: HPLRVYVEYTSELSCSRTRSCSL*TQGCCS
Trigger: GGAGCAGCAACCCTGAGTCAATAAGGAGCAGGACCT...TGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GAGGGGCAGGCAGCGAGGGCTGCCCGGAGTGCTCGGAAGGCTCCCTGCCCCACCACATGGAGCGTGCTCTaGTCCAGCCTCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: EGQAARAARSARKAPCPTTWSVL*SSLRRC
Trigger: GCAGCGGCGGAGGCTGGAGCAGAGCACGCTCCATGT...GGTGGGGCAGGGAGCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
CDS-3UTR GCA 90 bp GAGGGGCAGGCAGCGAGGGCTGCCCGGAGTGCTCGGAAGGCTCCCTGCCCCACCGGTGCACATGGAGCGTaGTCTGCTCCAGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: EGQAARAARSARKAPCPTGAHGA*SAPASA
Trigger: GGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACC...GGTGGGGCAGGGAGCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
CDS-3UTR CCA 90 bp GAGGGGCAGGCAGCGAGGGCTGCCCGGAGTGCTCGGAAGGCTCCCTGCCCCACCGAGCAGGGCCAATGTTaGCAGCAGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EGQAARAARSARKAPCPTEQGQC*QQQQQQ
Trigger: CTGCTGCTGCTGCTGCTGCCAACATTGGCCCTGCTC...GGTGGGGCAGGGAGCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
CDS-3UTR GCA 90 bp CCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCACATGGAGCGTGCTCTaGTCCAGCCTCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PGHGDTGRHCWHLLTPEATWSVL*SSLRRC
Trigger: GCAGCGGCGGAGGCTGGAGCAGAGCACGCTCCATGT...GGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CAGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCCCCTGGGGACCTCAGTaGGTCCAGCAGCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QGPRVLGSRGAHLAQGIPPWGPQ*VQQQGP
Trigger: AGGGCCCTGCTGCTGGACGCACTGAGGTCCCCAGGG...GGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp GTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCAGGCCAAGGCAGGGGTCGGGACAGCCTGGCATCCTaGGACCGCTGCTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VPGVPTWPRVFPGQGRGRDSLAS*DRCCLS
Trigger: GCTCAGGCAGCAGCGGTCCCAGGATGCCAGGCTGTC...CCGACCCCTGCCTTGGCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp CCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCAGTGCCCTCAGCCCTaGGGACCTCAGTGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: PGHGDTGRHCWHLLTPEAQCPQP*GPQCVQ
Trigger: CTGGACGCACTGAGGTCCCCAGGGCTGAGGGCACTG...GGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp CAGTGCGTCCAGCAGCAGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGCCCAAGGTCCTGGTTTaGGGTCGGGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QCVQQQGPRVLGSRGAHLPKVLV*GRGQWL
Trigger: CAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGG...CAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCTGGACGCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR TCA 90 bp GTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCAGGCCAAGGCAGGGGTCGGACGGAGACCCCTGGGTaGCTCTGGGTCTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: VPGVPTWPRVFPGQGRGRTETPG*LWVSAH
Trigger: GTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGT...CCGACCCCTGCCTTGGCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR TCA 90 bp CAGTGCGTCCAGCAGCAGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGCCTACTCCTGGCACGTaGCGGAGACCCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: QCVQQQGPRVLGSRGAHLPTPGT*RRPLGD
Trigger: GTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGG...CAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCTGGACGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp CAGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCCCCCATGCCACTCGGTaGTGGAGGCCAGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QGPRVLGSRGAHLAQGIPPHATR*WRPASQ
Trigger: CTGGCTTGCTGGCCTCCAGCACCGAGTGGCATGGGG...GGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp GCCTCCCCAAGGTCCTGGTTTGAGGTCGGGGGCAGTGGCTGCTCTCCACTGTCTTCCAGCCTCCGCCGCTaGCAGGTGGCTGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: ASPRSWFEVGGSGCSPLSSSLRR*QVAAQT
Trigger: GGTCTGGGCAGCCACCTGGCAGCGGCGGAGGCTGGA...AGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp TGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCGAGGGCTGCCCGGAGTaGTCGGAAGGCTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: WGHGQALLASANPGGPYFEGCPE*SEGSLP
Trigger: GGGCAGGGAGCCTTCCGAGCACTCCGGGCAGCCCTC...GAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGGCAGGCAGCGAGGGCTaGCCGGAGTGCTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GPYFRTGQLGQGLSKAQRAGSEG*PECSEG
Trigger: GCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGC...CCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATGCCACTCGGTGCTaGAGGCCAGCAAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PGHGDTGRHCWHLLTPEAHATRC*RPASQD
Trigger: GTCCTGGCTTGCTGGCCTCCAGCACCGAGTGGCATG...GGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCAGGCCAAGGCAGGGGTCGGGCCTGCTGCTGGCTCTaGTGCACATGGAGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: VPGVPTWPRVFPGQGRGRACCWL*CTWSVL
Trigger: GAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGC...CCGACCCCTGCCTTGGCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp GAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAACCCTGCCCCACCAGGTaGACTCTGGCAGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: EPVSWAKASLRPSGSHGQPCPTR*TLAGPT
Trigger: CGTGGGCCCTGCCAGAGTCCACCTGGTGGGGCAGGG...TTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCTCTCCTGCAGACACTaGGCCAGGTGCCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: PGHGDTGRHCWHLLTPEALSCRH*ARCLCR
Trigger: TCGGCACAGGCACCTGGCCCAGTGTCTGCAGGAGAG...GGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCTTCATGCCGGGACATaGGGACACGGGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: PGHGDTGRHCWHLLTPEALHAGT*GHGQAL
Trigger: CAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAG...GGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCACTGCTGCGGGCAACTaGGACTCCATCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGHGDTGRHCWHLLTPEATAAGN*DSILLG
Trigger: GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGT...GGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACCCAGGCGGCACCTGGTaGGGCTGGCGCGGTCCGTCA +
Preference number: 4 (lower is better)
Translates to: GNSLAVSFMPGHGDTGRHPGGTW*GWRGPS
Trigger: TGACGGACCGCGCCAGCCTCACCAGGTGCCGCCTGG...GTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTCCAGGCGGCACCTGGTaGGGCTGGCGCGGTCCGTCA +
Preference number: 4 (lower is better)
Translates to: GLLLRATGTPSCWASSESPGGTW*GWRGPS
Trigger: TGACGGACCGCGCCAGCCTCACCAGGTGCCGCCTGG...ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp AGCAGCAGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTAACCCTGTGCTCCTTCTaGGGGAACAGTGGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: SSRALGSLVPGVPTWPRVTLCSF*GNSGGA
Trigger: AGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGGGT...TACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp GGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTTCCAGCCTCCGCCGCTaGCAGGTGGCTGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: GQALLASANPGGPYFRTGSSLRR*QVAAQT
Trigger: GGTCTGGGCAGCCACCTGGCAGCGGCGGAGGCTGGA...ACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp ACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGGTCCAGCCTCCGCCGCTaGCAGGTGGCTGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: TQSQRPWPRTPHPERSQRSSLRR*QVAAQT
Trigger: GGTCTGGGCAGCCACCTGGCAGCGGCGGAGGCTGGA...CCTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCAGGCCAAGGCAGGGGTCGGTGGCTCTGGTGCACATaGAGCGTGCTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VPGVPTWPRVFPGQGRGRWLWCT*SVLCSS
Trigger: GCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCA...CCGACCCCTGCCTTGGCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp CAGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCAC +
Preference number: 4 (lower is better)
Translates to: QGPRVLGSRGAHLAQGIPEQWGR*APCRHH
Trigger: GTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTC...GGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp CAGTGCGTCCAGCAGCAGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGCTTCTGAGGGAACAGTaGGGGCGCTGGGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: QCVQQQGPRVLGSRGAHLLLREQ*GRWAPC
Trigger: ACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAG...CAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCTGGACGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp ACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGGCCCTGCCCCACCAGGTaGACTCTGGCAGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: TQSQRPWPRTPHPERSQRPCPTR*TLAGPT
Trigger: CGTGGGCCCTGCCAGAGTCCACCTGGTGGGGCAGGG...CCTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGGGGACCGCTGCTGCCTaGGCAGGGCCAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GPYFRTGQLGQGLSKAQRGTAAA*AGPMLA
Trigger: TGCCAACATTGGCCCTGCTCAGGCAGCAGCGGTCCC...CCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp AGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCAGCATCCTGGGACCGCTaGTGCCTGAGCAGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: RALGSLVPGVPTWPRVFPASWDR*CLSRAN
Trigger: ATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGATGC...TGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp GGTCCTGGTTTGAGGTCGGGGGCAGTGGCTGCTCTCCACTGTCTTCCTGCTGGGGGTGCACATGGAGCGTaGTCTGCTCCAGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: GPGLRSGAVAALHCLPAGGAHGA*SAPASA
Trigger: GGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACC...CCCAGCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp AGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCAGTCGGGGGCAGTGGCTaGTCTCCACTGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RALGSLVPGVPTWPRVFPVGGSG*SPLSSC
Trigger: GCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGAC...TGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCGTCCCAGCCTCCAGTaGCCTCAGCCCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: SFMPGHGDTGRHCWHLLTRPSLQ*PQPWGP
Trigger: AGGTCCCCAGGGCTGAGGGCACTGGAGGCTGGGACG...GGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GAGGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCCGTCCCAGCCTCCAGTaGCCTCAGCCCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: EAHTSEPVSWAKASLRPSRPSLQ*PQPWGP
Trigger: AGGTCCCCAGGGCTGAGGGCACTGGAGGCTGGGACG...GCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp AGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTCTCCCGGAGCTCAGCTaGCCGTTCACGGAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SVLHAGTWGHGQALLASALPELS*PFTERR
Trigger: GCGCCTCTCCGTGAACGGGCAGCTGAGCTCCGGGAG...AGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCACTCCCGGAGCTCAGCTaGCCGTTCACGGAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: CGCWPRMCHESSKAPVCALPELS*PFTERR
Trigger: GCGCCTCTCCGTGAACGGGCAGCTGAGCTCCGGGAG...TGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp TGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGGAGTCCCCGTGGCCCCTaGTCTAGGGCCTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: CAHAALPGPEQNVGGKSWSPRGP*SRASRS
Trigger: GCTCCGGGAGGCCCTAGAGCAGGGGCCACGGGGACT...CCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp TCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATGGCAGGGCCCACGCTaGCCCAGAACCGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: SSSVLHAGTWGHGQALLAWQGPR*PRTAGT
Trigger: AGTCCCTGCGGTTCTGGGGCAGCGTGGGCCCTGCCA...TGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTGCAGGCAGCGAGGGCTaGCCGGAGTGCTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GLLLRATGTPSCWASSESAGSEG*PECSEG
Trigger: GCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGC...ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCGCAGGCAGCGAGGGCTaGCCGGAGTGCTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SGDTESETLAKDSPSGEVAGSEG*PECSEG
Trigger: GCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGC...GACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp ACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGGTGGGCCAGGTGCCTGTaGCGAAGGACCCGGGGCATC +
Preference number: 4 (lower is better)
Translates to: TQSQRPWPRTPHPERSQRWARCL*RRTRGI
Trigger: GATGCCCCGGGTCCTTCGGCACAGGCACCTGGCCCA...CCTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCAGGCCAAGGCAGGGGTCGGGTCACAGCCCACTTCTaGCTACTCCTGGCACGTGAC +
Preference number: 4 (lower is better)
Translates to: VPGVPTWPRVFPGQGRGRVTAHF*LLLARD
Trigger: GTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGAC...CCGACCCCTGCCTTGGCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp CCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTATTCCCAGGCCAGCCTCCCCAAGGTCCTaGTTTGAGGTCGGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PRVLGSRGAHLAQGIPRPASPRS*FEVGGS
Trigger: ACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGC...TGGCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp CCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGCAGCCTTGCCCAGTGGGGGAATGGCTaGGCCGGGGTCCACTCCCGT +
Preference number: 4 (lower is better)
Translates to: PRMCHESSKAPVCACSLAQWGNG*AGVHSR
Trigger: ACGGGAGTGGACCCCGGCCCAGCCATTCCCCCACTG...GGCAAGGCTGCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR TCA 90 bp CCTTGTTTAGGGCTGCCAGACCCAGCAAGGTGGCCTGCAGAGAGGCCTCCCCAAGGGACCGCTGCTGCCTaGGCAGGGCCAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PCLGLPDPARWPAERPPQGTAAA*AGPMLA
Trigger: TGCCAACATTGGCCCTGCTCAGGCAGCAGCGGTCCC...TTGGGGAGGCCTCTCTGCAGGCCACCTTGCTGGGTCTGGCAGCCCTAAACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR TCA 90 bp TCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCACCCAAGGTCCTGGTTTaGGGTCGGGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSVLHAGTWGHGQALLAPKVLV*GRGQWL
Trigger: CAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGG...TGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp TACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCCCAGGCGGCACCTGGTaGGGCTGGCGCGGTCCGTCA +
Preference number: 4 (lower is better)
Translates to: YMNEWVTAAGNWDSILLGPGGTW*GWRGPS
Trigger: TGACGGACCGCGCCAGCCTCACCAGGTGCCGCCTGG...GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GTATGGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTGCGGCGATGCCTCCAGGCGGCACCTGGTaGGGCTGGCGCGGTCCGTCA +
Preference number: 4 (lower is better)
Translates to: VWNSEPRWSPELLPAAMPPGGTW*GWRGPS
Trigger: TGACGGACCGCGCCAGCCTCACCAGGTGCCGCCTGG...AGGCATCGCCGCAGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCCATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp GAGGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCCCCCATGCCACTCGGTaGTGGAGGCCAGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: EAHTSEPVSWAKASLRPSPHATR*WRPASQ
Trigger: CTGGCTTGCTGGCCTCCAGCACCGAGTGGCATGGGG...GCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCCCATGCCACTCGGTaGTGGAGGCCAGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SFMPGHGDTGRHCWHLLTPHATR*WRPASQ
Trigger: CTGGCTTGCTGGCCTCCAGCACCGAGTGGCATGGGG...GGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGCAGCCTTGCCCCCCATGCCACTCGGTaGTGGAGGCCAGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PRMCHESSKAPVCACSLAPHATR*WRPASQ
Trigger: CTGGCTTGCTGGCCTCCAGCACCGAGTGGCATGGGG...GGCAAGGCTGCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp TGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTTCCAGCCTCCGCCGCTaGCAGGTGGCTGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: WFVGAGLGCATSPPRLLCSSLRR*QVAAQT
Trigger: GGTCTGGGCAGCCACCTGGCAGCGGCGGAGGCTGGA...ACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp TGTTTAGGGCTGCCAGACCCAGCAAGGTGGCCTGCAGAGAGGCCTCCCCAAGGTACATGGAGCGTGCTCTaGTCCAGCCTCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CLGLPDPARWPAERPPQGTWSVL*SSLRRC
Trigger: GCAGCGGCGGAGGCTGGAGCAGAGCACGCTCCATGT...ACCTTGGGGAGGCCTCTCTGCAGGCCACCTTGCTGGGTCTGGCAGCCCTAAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp GAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAACACCACCTCAGGGCCTaGTGCTGGCTCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: EPVSWAKASLRPSGSHGQHHLRA*CWLWCT
Trigger: TGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTGGTG...TTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CAGTGCGTCCAGCAGCAGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGTCTCCACTGTCTTCCTaGTGGGTCTGGCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QCVQQQGPRVLGSRGAHLSPLSS*WVWLAL
Trigger: CAAGGCCAGCCAGACCCAGCAGGAAGACAGTGGAGA...CAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCTGGACGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp GGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGGTCGGGGGCAGTGGCTaGTCTCCACTGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GPYFRTGQLGQGLSKAQRVGGSG*SPLSSC
Trigger: GCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGAC...CCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAGTCGGGGGCAGTGGCTaGTCTCCACTGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: EPVSWAKASLRPSGSHGQVGGSG*SPLSSC
Trigger: GCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGAC...TTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGGCGTCACACGGGCAGTaGGTCCCTGAGCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: GPYFRTGQLGQGLSKAQRASHGQ*VPEPAL
Trigger: AAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGC...CCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp AACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCCCCTGGGGACCTCAGTaGGTCCAGCAGCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: NSLAVSFMPGHGDTGRHCPWGPQ*VQQQGP
Trigger: AGGGCCCTGCTGCTGGACGCACTGAGGTCCCCAGGG...GCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGGAGCCCTGGGGACCTCAGTaGGTCCAGCAGCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CACSLARPRAECWGKVLEPWGPQ*VQQQGP
Trigger: AGGGCCCTGCTGCTGGACGCACTGAGGTCCCCAGGG...CTCCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp AACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCCTCCCGGAGCTCAGCTaGCCGTTCACGGAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: NSLAVSFMPGHGDTGRHCLPELS*PFTERR
Trigger: GCGCCTCTCCGTGAACGGGCAGCTGAGCTCCGGGAG...GCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCCCAGCTCATACTCCTTaGCCTGCTGGGCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: WGHGQALLASANPGGPYFPAHTP*PAGPRP
Trigger: TGGCCGAGGCCCAGCAGGGCAAGGAGTATGAGCTGG...GAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp AGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGTGGGCCAGGTGCCTGTaGCGAAGGACCCGGGGCATC +
Preference number: 4 (lower is better)
Translates to: SGLLLRATGTPSCWASSEWARCL*RRTRGI
Trigger: GATGCCCCGGGTCCTTCGGCACAGGCACCTGGCCCA...CTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GAGGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCAGACACTGGGCCAGGTaGCTGTGCCGAAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: EAHTSEPVSWAKASLRPSRHWAR*LCRRTR
Trigger: CCGGGTCCTTCGGCACAGGCACCTGGCCCAGTGTCT...GCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GAGGGGCAGGCAGCGAGGGCTGCCCGGAGTGCTCGGAAGGCTCCCTGCCCCACCAAGTCTAGTGTCCTCTaGCCTATCTGTTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: EGQAARAARSARKAPCPTKSSVL*PICSSP
Trigger: TGGGGAAGAACAGATAGGGCAGAGGACACTAGACTT...GGTGGGGCAGGGAGCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
CDS-3UTR CCA 90 bp GACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGGACAGCCTGGCATCCTaGGACCGCTGCTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: DTESETLAKDSPSGEVPEDSLAS*DRCCLS
Trigger: GCTCAGGCAGCAGCGGTCCCAGGATGCCAGGCTGTC...CTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GCCTCCCCAAGGTCCTGGTTTGAGGTCGGGGGCAGTGGCTGCTCTCCACTGTCTCAAGCCAGGACAGCCTaGCATCCTGGGACCGCTGCT +
Preference number: 4 (lower is better)
Translates to: ASPRSWFEVGGSGCSPLSQARTA*HPGTAA
Trigger: AGCAGCGGTCCCAGGATGCCAGGCTGTCCTGGCTTG...AGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp GGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCAGGGCCTGCTGCTaGCTCTGGTGCACATGGAGC +
Preference number: 4 (lower is better)
Translates to: GPYFRTGQLGQGLSKAQRLRACC*LWCTWS
Trigger: GCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAG...CCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCAC +
Preference number: 4 (lower is better)
Translates to: GPYFRTGQLGQGLSKAQREQWGR*APCRHH
Trigger: GTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTC...CCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTGGCCAGGGGTGCCCACCTaGCCCAGGGTATTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GARGLFGSHPRKPKAGEWPGVPT*PRVFPG
Trigger: GCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGG...CCACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGGGGTGCCCACCTaGCCCAGGGTATTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SGDTESETLAKDSPSGEVPGVPT*PRVFPG
Trigger: GCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGG...GACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AAGCGTCACACGGGCAGTGCGTCCCTGAGCCAGCACTTCTGGGTAGGCCTTGTTCCAGGGGTGCCCACCTaGCCCAGGGTATTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KRHTGSASLSQHFWVGLVPGVPT*PRVFPG
Trigger: GCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGG...AACAAGGCCTACCCAGAAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp GGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTCAGTGCCCTCAGCCCTaGGGACCTCAGTGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: GQALLASANPGGPYFRTGQCPQP*GPQCVQ
Trigger: CTGGACGCACTGAGGTCCCCAGGGCTGAGGGCACTG...ACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGCAGCCTTGCCGCCACAGCCTCGGCCTaGCCTCCTGCATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PRMCHESSKAPVCACSLAATASA*PPASRV
Trigger: GACTCTGGATGCAGGAGGCCAGGCCGAGGCTGTGGC...GGCAAGGCTGCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp TGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCACGGGCAGGCACTGCTaGCATCTGCTAACCCCGGAG +
Preference number: 4 (lower is better)
Translates to: WGHGQALLASANPGGPYFTGRHC*HLLTPE
Trigger: CTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGT...GAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTTCATGCCGGGACATaGGGACACGGGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: GPYFRTGQLGQGLSKAQRLHAGT*GHGQAL
Trigger: CAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAG...CCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATAGCTCAGTGGGGGAATaGCTGGGCCGGGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: VGAGLGCATSPPRLLCAHSSVGE*LGRGPL
Trigger: GAGTGGACCCCGGCCCAGCCATTCCCCCACTGAGCT...ATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR TCA 90 bp TGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGGAGGGGACCGCTGCTGCCTaGGCAGGGCCAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: CACSLARPRAECWGKVLEGTAAA*AGPMLA
Trigger: TGCCAACATTGGCCCTGCTCAGGCAGCAGCGGTCCC...CTCCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR TCA 90 bp AGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGCCCAAGGTCCTGGTTTaGGGTCGGGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGLLLRATGTPSCWASSEPKVLV*GRGQWL
Trigger: CAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGG...CTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGACGGAGACCCCTGGGTaGCTCTGGGTCTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: DTESETLAKDSPSGEVPETETPG*LWVSAH
Trigger: GTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGT...CTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp AGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCAGGTCCTACTCCTGGCACGTaGCGGAGACCCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SWAKASLRPSGSHGQMSGPTPGT*RRPLGD
Trigger: GTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGG...ACCTGACATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGGCATCCTGGGACCGCTaGTGCCTGAGCAGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: DTESETLAKDSPSGEVPEASWDR*CLSRAN
Trigger: ATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGATGC...CTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTGCATCCTGGGACCGCTaGTGCCTGAGCAGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: GQALLASANPGGPYFRTGASWDR*CLSRAN
Trigger: ATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGATGC...ACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACCCCCATGCCACTCGGTaGTGGAGGCCAGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GNSLAVSFMPGHGDTGRHPHATR*WRPASQ
Trigger: CTGGCTTGCTGGCCTCCAGCACCGAGTGGCATGGGG...GTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCCCATGCCACTCGGTaGTGGAGGCCAGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SGDTESETLAKDSPSGEVPHATR*WRPASQ
Trigger: CTGGCTTGCTGGCCTCCAGCACCGAGTGGCATGGGG...GACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp ACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGTGCACATGGAGCGTaGTCTGCTCCAGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: TSEPVSWAKASLRPSGSHGAHGA*SAPASA
Trigger: GGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACC...ATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGGCAGTGCGTCCCTGAGCCAGCACTTCTGGGTAGGCCTTGTTTAGGGCTGCCACACCTCAGGGCCTGCTaGTGGCTCTGGTGCACATGG +
Preference number: 4 (lower is better)
Translates to: GQCVPEPALLGRPCLGLPHLRAC*WLWCTW
Trigger: CCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTG...TGGCAGCCCTAAACAAGGCCTACCCAGAAGTGCTGGCTCAGGGACGCACTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp AGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTCACCACCTCAGGGCCTaGTGCTGGCTCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: SVLHAGTWGHGQALLASAHHLRA*CWLWCT
Trigger: TGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTGGTG...AGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp ACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGGCACCACCTCAGGGCCTaGTGCTGGCTCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: TQSQRPWPRTPHPERSQRHHLRA*CWLWCT
Trigger: TGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTGGTG...CCTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp AGGTCCTGGTTTGAGGTCGGGGGCAGTGGCTGCTCTCCACTGTCTTCCTGCTGGCACCACCTCAGGGCCTaGTGCTGGCTCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: RSWFEVGGSGCSPLSSCWHHLRA*CWLWCT
Trigger: TGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTGGTG...CCAGCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp CCTTGTTTAGGGCTGCCAGACCCAGCAAGGTGGCCTGCAGAGAGGCCTCCCCAAGCGTCACACGGGCAGTaGGTCCCTGAGCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: PCLGLPDPARWPAERPPQASHGQ*VPEPAL
Trigger: AAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGC...TTGGGGAGGCCTCTCTGCAGGCCACCTTGCTGGGTCTGGCAGCCCTAAACAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp CCCCAAGGTCCTGGTTTGAGGTCGGGGGCAGTGGCTGCTCTCCACTGTCTTCCTCCTTGGTTCCAGGGGTaGCCACCTGGCCCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: PQGPGLRSGAVAALHCLPPWFQG*PPGPGY
Trigger: ATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGG...AGGAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp TGGGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTCCCTGGGGACCTCAGTaGGTCCAGCAGCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: WVQEVYLGAIPGSPRRGSPWGPQ*VQQQGP
Trigger: AGGGCCCTGCTGCTGGACGCACTGAGGTCCCCAGGG...ACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR GCA 90 bp TACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCAGTCCCCGTGGCCCCTaGTCTAGGGCCTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: YMNEWVTAAGNWDSILLGSPRGP*SRASRS
Trigger: GCTCCGGGAGGCCCTAGAGCAGGGGCCACGGGGACT...GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTCCCAGCTCATACTCCTTaGCCTGCTGGGCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GRHCWHLLTPEAHTSEPVPAHTP*PAGPRP
Trigger: TGGCCGAGGCCCAGCAGGGCAAGGAGTATGAGCTGG...GACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGCCAGCTCATACTCCTTaGCCTGCTGGGCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: DTESETLAKDSPSGEVPEPAHTP*PAGPRP
Trigger: TGGCCGAGGCCCAGCAGGGCAAGGAGTATGAGCTGG...CTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAAAGACACTGGGCCAGGTaGCTGTGCCGAAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: DTGRHCWHLLTPEAHTSERHWAR*LCRRTR
Trigger: CCGGGTCCTTCGGCACAGGCACCTGGCCCAGTGTCT...TTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp AACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCAGACACTGGGCCAGGTaGCTGTGCCGAAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: NSLAVSFMPGHGDTGRHCRHWAR*LCRRTR
Trigger: CCGGGTCCTTCGGCACAGGCACCTGGCCCAGTGTCT...GCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCGACACCACCCTCTCCTaGAGACACTGGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SFMPGHGDTGRHCWHLLTDTTLS*RHWARC
Trigger: GCACCTGGCCCAGTGTCTGCAGGAGAGGGTGGTGTC...GGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTGACACGGGCAGGCACTaGTGGCATCTGCTAACCCCG +
Preference number: 4 (lower is better)
Translates to: GQALLASANPGGPYFRTGDTGRH*WHLLTP
Trigger: CGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTC...ACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTCGACACGGGCAGGCACTaGTGGCATCTGCTAACCCCG +
Preference number: 4 (lower is better)
Translates to: GRHCWHLLTPEAHTSEPVDTGRH*WHLLTP
Trigger: CGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTC...GACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCGACACGGGCAGGCACTaGTGGCATCTGCTAACCCCG +
Preference number: 4 (lower is better)
Translates to: SFMPGHGDTGRHCWHLLTDTGRH*WHLLTP
Trigger: CGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTC...GGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp ACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGGGACACGGGCAGGCACTaGTGGCATCTGCTAACCCCG +
Preference number: 4 (lower is better)
Translates to: TQSQRPWPRTPHPERSQRDTGRH*WHLLTP
Trigger: CGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTC...CCTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGCTCCTGTGTGCGCATaGAGCCTTGCCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VGAGLGCATSPPRLLCAHAPVCA*SLARPR
Trigger: TCTGGGCCTGGCAAGGCTGCATGCGCACACAGGAGC...ATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp CCTTGTTTAGGGCTGCCAGACCCAGCAAGGTGGCCTGCAGAGAGGCCTCCCCAACATGCCACTCGGTGCTaGAGGCCAGCAAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PCLGLPDPARWPAERPPQHATRC*RPASQD
Trigger: GTCCTGGCTTGCTGGCCTCCAGCACCGAGTGGCATG...TTGGGGAGGCCTCTCTGCAGGCCACCTTGCTGGGTCTGGCAGCCCTAAACAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp AGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTGCCTGCTGCTGGCTCTaGTGCACATGGAGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SVLHAGTWGHGQALLASAACCWL*CTWSVL
Trigger: GAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGC...AGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CCAAGGGGATGTAAGCGTCACACGGGCAGTGCGTCCCTGAGCCAGCACTTCTGGCTCAGGGCCTGCTGCTaGCTCTGGTGCACATGGAGC +
Preference number: 4 (lower is better)
Translates to: PRGCKRHTGSASLSQHFWLRACC*LWCTWS
Trigger: GCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAG...CCAGAAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGCTTACATCCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCAC +
Preference number: 4 (lower is better)
Translates to: SFMPGHGDTGRHCWHLLTEQWGR*APCRHH
Trigger: GTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTC...GGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCAC +
Preference number: 4 (lower is better)
Translates to: GQALLASANPGGPYFRTGEQWGR*APCRHH
Trigger: GTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTC...ACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCAGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCAC +
Preference number: 4 (lower is better)
Translates to: SSSVLHAGTWGHGQALLAEQWGR*APCRHH
Trigger: GTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTC...TGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCACTTCTGAGGGAACAGTaGGGGCGCTGGGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SSSVLHAGTWGHGQALLALLREQ*GRWAPC
Trigger: ACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAG...TGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCCCTGCTGGGTCTGGCTaGCCTTGGTCAGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: WGHGQALLASANPGGPYFPAGSG*PWSEGD
Trigger: ATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGG...GAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAAGTGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTCCAGGGGTGCCCACCTaGCCCAGGGTATTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EVVCGCWPRMCHESSKAPPGVPT*PRVFPG
Trigger: GCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGG...AGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTCAGTGCCCTCAGCCCTaGGGACCTCAGTGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: GLLLRATGTPSCWASSESQCPQP*GPQCVQ
Trigger: CTGGACGCACTGAGGTCCCCAGGGCTGAGGGCACTG...ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCAGTGCCCTCAGCCCTaGGGACCTCAGTGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: PSPPQKWFVGAGLGCATSQCPQP*GPQCVQ
Trigger: CTGGACGCACTGAGGTCCCCAGGGCTGAGGGCACTG...ACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTCACCACCTGCAGCTTTaGCCAGAGCCGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GQALLASANPGGPYFRTGHHLQL*PEPKGQ
Trigger: CTGGCCCTTCGGCTCTGGCCAAAGCTGCAGGTGGTG...ACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTGGGCCACAGCCTCGGCCTaGCCTCCTGCATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GARGLFGSHPRKPKAGEWATASA*PPASRV
Trigger: GACTCTGGATGCAGGAGGCCAGGCCGAGGCTGTGGC...CCACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGGCCACAGCCTCGGCCTaGCCTCCTGCATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SGLLLRATGTPSCWASSEATASA*PPASRV
Trigger: GACTCTGGATGCAGGAGGCCAGGCCGAGGCTGTGGC...CTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCACTCTCCTGCAGACACTaGGCCAGGTGCCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: SSSVLHAGTWGHGQALLALSCRH*ARCLCR
Trigger: TCGGCACAGGCACCTGGCCCAGTGTCTGCAGGAGAG...TGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp ACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGGACGGGCAGGCACTGCTaGCATCTGCTAACCCCGGAG +
Preference number: 4 (lower is better)
Translates to: TQSQRPWPRTPHPERSQRTGRHC*HLLTPE
Trigger: CTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGT...CCTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp ACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGGACTGCTGCGGGCAACTaGGACTCCATCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TQSQRPWPRTPHPERSQRTAAGN*DSILLG
Trigger: GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGT...CCTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGCGTGACGGAGACCCCTaGGTGACTCTGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: DTESETLAKDSPSGEVPERDGDP*VTLGLS
Trigger: GCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACG...CTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CCTGTGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCAGTCCTGGAGCTCAGTaGGGGAATGGCTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PVCACSLARPRAECWGKVSPGAQ*GNGWAG
Trigger: CCCGGCCCAGCCATTCCCCCACTGAGCTCCAGGACT...GACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR TCA 90 bp TCTGGGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGGGACCGCTGCTGCCTaGGCAGGGCCAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SGCKRFIWEPSQEAQGGGGTAAA*AGPMLA
Trigger: TGCCAACATTGGCCCTGCTCAGGCAGCAGCGGTCCC...TCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587427.6
CDS-3UTR TCA 90 bp AAGTGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGCCCAAGGTCCTGGTTTaGGGTCGGGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KWFVGAGLGCATSPPRLLPKVLV*GRGQWL
Trigger: CAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGG...CAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR TCA 90 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCGCTTGCCCAGTGCACTaGCTGAGCACACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SFMPGHGDTGRHCWHLLTACPVH*LSTQLW
Trigger: CCACAGCTGTGTGCTCAGTCAGTGCACTGGGCAAGC...GGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GAGGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGCTTGCCCAGTGCACTaGCTGAGCACACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EAHTSEPVSWAKASLRPSACPVH*LSTQLW
Trigger: CCACAGCTGTGTGCTCAGTCAGTGCACTGGGCAAGC...GCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCTGCGCCTACTCCTGGCACGTaGCGGAGACCCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: EGRESPRRKYMNEWVTAAPTPGT*RRPLGD
Trigger: GTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGG...CGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATCCTGGGACCGCTGCTaGCTGAGCAGGGCCAATGTT +
Preference number: 4 (lower is better)
Translates to: CGCWPRMCHESSKAPVCASWDRC*LSRANV
Trigger: AACATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGA...TGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp CCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTGCATCCTGGGACCGCTaGTGCCTGAGCAGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: PSPPQKWFVGAGLGCATSASWDR*CLSRAN
Trigger: ATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGATGC...ACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp TGGGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTGGTGCACATGGAGCGTaGTCTGCTCCAGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: WVQEVYLGAIPGSPRRGSGAHGA*SAPASA
Trigger: GGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACC...ACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR GCA 90 bp TGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGGAGCACCTCAGGGCCTGCTaGTGGCTCTGGTGCACATGG +
Preference number: 4 (lower is better)
Translates to: CACSLARPRAECWGKVLEHLRAC*WLWCTW
Trigger: CCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTG...CTCCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp CCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTGTCGGGGGCAGTGGCTaGTCTCCACTGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PSPPQKWFVGAGLGCATSVGGSG*SPLSSC
Trigger: GCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGAC...ACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp AGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGGCGTCACACGGGCAGTaGGTCCCTGAGCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: SGLLLRATGTPSCWASSEASHGQ*VPEPAL
Trigger: AAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGC...CTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCGCGTCACACGGGCAGTaGGTCCCTGAGCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: SGDTESETLAKDSPSGEVASHGQ*VPEPAL
Trigger: AAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGC...GACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTGCGTCACACGGGCAGTaGGTCCCTGAGCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: PSPPQKWFVGAGLGCATSASHGQ*VPEPAL
Trigger: AAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGC...ACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp CAAATGTCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGACCCTGGGGACCTCAGTaGGTCCAGCAGCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QMSGDTESETLAKDSPSGPWGPQ*VQQQGP
Trigger: AGGGCCCTGCTGCTGGACGCACTGAGGTCCCCAGGG...TCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGACATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GTATGGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTGCGGCGATGCCTCGTCCCAGCCTCCAGTaGCCTCAGCCCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: VWNSEPRWSPELLPAAMPRPSLQ*PQPWGP
Trigger: AGGTCCCCAGGGCTGAGGGCACTGGAGGCTGGGACG...AGGCATCGCCGCAGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCCATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp CAAATGTCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGACTCCCGGAGCTCAGCTaGCCGTTCACGGAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: QMSGDTESETLAKDSPSGLPELS*PFTERR
Trigger: GCGCCTCTCCGTGAACGGGCAGCTGAGCTCCGGGAG...TCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGACATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGAGAGTCACCACCACCTaGAGCTTTGGCCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: GPYFRTGQLGQGLSKAQRRVTTT*SFGQSR
Trigger: TCGGCTCTGGCCAAAGCTGCAGGTGGTGGTGACTCT...CCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAATCATACTCCTTGCCCTaGTGGGCCTCGGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: EPVSWAKASLRPSGSHGQSYSLP*WASAKR
Trigger: CCTTTTGGCCGAGGCCCAGCAGGGCAAGGAGTATGA...TTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGTCATACTCCTTGCCCTaGTGGGCCTCGGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: GPYFRTGQLGQGLSKAQRSYSLP*WASAKR
Trigger: CCTTTTGGCCGAGGCCCAGCAGGGCAAGGAGTATGA...CCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGGCCAGCTCATACTCCTTaGCCTGCTGGGCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: CAHAALPGPEQNVGGKSWPAHTP*PAGPRP
Trigger: TGGCCGAGGCCCAGCAGGGCAAGGAGTATGAGCTGG...CCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp TACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCTGGCAGGGCCCACGCTaGCCCAGAACCGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: YMNEWVTAAGNWDSILLGWQGPR*PRTAGT
Trigger: AGTCCCTGCGGTTCTGGGGCAGCGTGGGCCCTGCCA...GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCCTGTGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTGACAGCCTGGCATCCTaGGACCGCTGCTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SCVRMQPCQAQSRMLGESDSLAS*DRCCLS
Trigger: GCTCAGGCAGCAGCGGTCCCAGGATGCCAGGCTGTC...ACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACACAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACAAGCCAGGACAGCCTaGCATCCTGGGACCGCTGCT +
Preference number: 4 (lower is better)
Translates to: DTGRHCWHLLTPEAHTSEQARTA*HPGTAA
Trigger: AGCAGCGGTCCCAGGATGCCAGGCTGTCCTGGCTTG...TTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCCATGCCACTCGGTGCTaGAGGCCAGCAAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: NSLAVSFMPGHGDTGRHCHATRC*RPASQD
Trigger: GTCCTGGCTTGCTGGCCTCCAGCACCGAGTGGCATG...GCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATGGCTCTGGTGCACATaGAGCGTGCTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSSVLHAGTWGHGQALLAWLWCT*SVLCSS
Trigger: GCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCA...TGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AGGTCCTGGTTTGAGGTCGGGGGCAGTGGCTGCTCTCCACTGTCTTCCTGCTGGCCTGCTGGGTCTGGCTaGCCTTGGTCAGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: RSWFEVGGSGCSPLSSCWPAGSG*PWSEGD
Trigger: ATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGG...CCAGCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp ACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGCCTCCCCAAGGTCCTaGTTTGAGGTCGGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TSEPVSWAKASLRPSGSHASPRS*FEVGGS
Trigger: ACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGC...ATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCACACCACCTGCAGCTTTaGCCAGAGCCGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VSWAKASLRPSGSHGQMSHHLQL*PEPKGQ
Trigger: CTGGCCCTTCGGCTCTGGCCAAAGCTGCAGGTGGTG...TGACATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCACCACCTGCAGCTTTaGCCAGAGCCGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PQKWFVGAGLGCATSPPRHHLQL*PEPKGQ
Trigger: CTGGCCCTTCGGCTCTGGCCAAAGCTGCAGGTGGTG...CCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTCTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GAGGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGAGGCAGCTTCCTCCTaGGTGCCTTCCTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: EAHTSEPVSWAKASLRPSEAASS*VPSLTG
Trigger: CCCAGTCAAGGAAGGCACCCAGGAGGAAGCTGCCTC...GCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCGGCCAAAAGGAGGGTaGAGGCAGCTTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGDTESETLAKDSPSGEVRPKGG*RQLPPG
Trigger: CCCAGGAGGAAGCTGCCTCCACCCTCCTTTTGGCCG...GACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCAGGTCGGCCAAAAGGAGGGTaGAGGCAGCTTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SWAKASLRPSGSHGQMSGRPKGG*RQLPPG
Trigger: CCCAGGAGGAAGCTGCCTCCACCCTCCTTTTGGCCG...ACCTGACATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATCCCTGCCCCACCAGGTaGACTCTGGCAGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: YCCGQLGLHPAGHPLRVYPCPTR*TLAGPT
Trigger: CGTGGGCCCTGCCAGAGTCCACCTGGTGGGGCAGGG...ATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCTCAGAACCGGTCAGCTaGGCCAAGGCCTCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: WGHGQALLASANPGGPYFSEPVS*AKASLR
Trigger: CCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGA...GAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAAACGGGCAGGCACTGCTaGCATCTGCTAACCCCGGAG +
Preference number: 4 (lower is better)
Translates to: DTGRHCWHLLTPEAHTSETGRHC*HLLTPE
Trigger: CTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGT...TTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCACGGGCAGGCACTGCTaGCATCTGCTAACCCCGGAG +
Preference number: 4 (lower is better)
Translates to: NSLAVSFMPGHGDTGRHCTGRHC*HLLTPE
Trigger: CTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGT...GCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACACTGCTGCGGGCAACTaGGACTCCATCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GNSLAVSFMPGHGDTGRHTAAGN*DSILLG
Trigger: GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGT...GTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CAGTGCGTCCCTGAGCCAGCACTTCTGGGTAGGCCTTGTTTAGGGCTGCCAGACCGTGACGGAGACCCCTaGGTGACTCTGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QCVPEPALLGRPCLGLPDRDGDP*VTLGLS
Trigger: GCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACG...GTCTGGCAGCCCTAAACAAGGCCTACCCAGAAGTGCTGGCTCAGGGACGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR CCA 90 bp GGTCCTGGTTTGAGGTCGGGGGCAGTGGCTGCTCTCCACTGTCTTCCTGCTGGGACTTCTGCCTACTCCTaGCACGTGACGGAGACCCCT +
Preference number: 4 (lower is better)
Translates to: GPGLRSGAVAALHCLPAGTSAYS*HVTETP
Trigger: AGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGT...CCCAGCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR TCA 90 bp TCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCTGTCTGTGCTCCTTCTaGGGGAACAGTGGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: SGDTESETLAKDSPSGEVCLCSF*GNSGGA
Trigger: AGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGACA...GACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp TCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGGTTGCCCAGGCGGCACCTGGTaGGGCTGGCGCGGTCCGTCA +
Preference number: 4 (lower is better)
Translates to: SCSRTMKLRSCSLLTQGCPGGTW*GWRGPS
Trigger: TGACGGACCGCGCCAGCCTCACCAGGTGCCGCCTGG...GCAACCCTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp ACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGCTTGCCCAGTGCACTaGCTGAGCACACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TSEPVSWAKASLRPSGSHACPVH*LSTQLW
Trigger: CCACAGCTGTGTGCTCAGTCAGTGCACTGGGCAAGC...ATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GAGTGGGGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGACGGAGACCCCTGGGTaGCTCTGGGTCTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: EWGREGRESPRRKYMNEWTETPG*LWVSAH
Trigger: GTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGT...CCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GTATGGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTGCGGCGATGCCTCCTACTCCTGGCACGTaGCGGAGACCCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: VWNSEPRWSPELLPAAMPPTPGT*RRPLGD
Trigger: GTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGG...AGGCATCGCCGCAGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCCATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp CAGTGCGTCCCTGAGCCAGCACTTCTGGGTAGGCCTTGTTTAGGGCTGCCAGACTCCTGGGACCGCTGCTaGCTGAGCAGGGCCAATGTT +
Preference number: 4 (lower is better)
Translates to: QCVPEPALLGRPCLGLPDSWDRC*LSRANV
Trigger: AACATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGA...GTCTGGCAGCCCTAAACAAGGCCTACCCAGAAGTGCTGGCTCAGGGACGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp GGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTGCGGCGATGCCTTATGGGTGCACATGGAGCGTaGTCTGCTCCAGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: GTVNPDGLRSCFLRRCLMGAHGA*SAPASA
Trigger: GGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACC...CATAAGGCATCGCCGCAGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp GAGTGGGGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGCACCTCAGGGCCTGCTaGTGGCTCTGGTGCACATGG +
Preference number: 4 (lower is better)
Translates to: EWGREGRESPRRKYMNEWHLRAC*WLWCTW
Trigger: CCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTG...CCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTCACCACCTCAGGGCCTaGTGCTGGCTCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: WFVGAGLGCATSPPRLLCHHLRA*CWLWCT
Trigger: TGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTGGTG...ACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp CCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCGATGATTCCGGAAGGTaGTTATGTCTGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PGHGDTGRHCWHLLTPEADDSGR*LCLCSF
Trigger: GAAGGAGCACAGACATAAGCACCTTCCGGAATCATC...GGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GAGGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCTCTCCACTGTCTTCCTaGTGGGTCTGGCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: EAHTSEPVSWAKASLRPSSPLSS*WVWLAL
Trigger: CAAGGCCAGCCAGACCCAGCAGGAAGACAGTGGAGA...GCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGCAGCCTTGCCTCTCCACTGTCTTCCTaGTGGGTCTGGCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PRMCHESSKAPVCACSLASPLSS*WVWLAL
Trigger: CAAGGCCAGCCAGACCCAGCAGGAAGACAGTGGAGA...GGCAAGGCTGCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp TGGGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTCCTTGGTTCCAGGGGTaGCCACCTGGCCCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: WVQEVYLGAIPGSPRRGSPWFQG*PPGPGY
Trigger: ATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGG...ACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR GCA 90 bp GAGTGGGGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGCCTTGGTTCCAGGGGTaGCCACCTGGCCCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: EWGREGRESPRRKYMNEWPWFQG*PPGPGY
Trigger: ATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGG...CCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTACTCCCGGAGCTCAGCTaGCCGTTCACGGAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LLLRATGTPSCWASSESLLPELS*PFTERR
Trigger: GCGCCTCTCCGTGAACGGGCAGCTGAGCTCCGGGAG...TAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCAGAGTCACCACCACCTaGAGCTTTGGCCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: SFMPGHGDTGRHCWHLLTRVTTT*SFGQSR
Trigger: TCGGCTCTGGCCAAAGCTGCAGGTGGTGGTGACTCT...GGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGCAGCCTTGCCAGAGTCACCACCACCTaGAGCTTTGGCCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: PRMCHESSKAPVCACSLARVTTT*SFGQSR
Trigger: TCGGCTCTGGCCAAAGCTGCAGGTGGTGGTGACTCT...GGCAAGGCTGCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp AAGTACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGAGGGCTGCCCGGAGTaGTCGGAAGGCTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: KYMNEWVTAAGNWDSILLEGCPE*SEGSLP
Trigger: GGGCAGGGAGCCTTCCGAGCACTCCGGGCAGCCCTC...CAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GCACACAGCTGTGGCCACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATGCAGGCAGCGAGGGCTaGCCGGAGTGCTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AHSCGHQRTSLGCDTGNHAGSEG*PECSEG
Trigger: GCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGC...ATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGTGGCCACAGCTGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGATGGTCTCCGGAGTTaGTTCCTGCGGCGATGCCTT +
Preference number: 4 (lower is better)
Translates to: VGAGLGCATSPPRLLCAHDGLRS*FLRRCL
Trigger: AAGGCATCGCCGCAGGAAGCAACTCCGGAGACCATC...ATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp AGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCAGGTGAGCAGGGCCAATGTTaGCAGCAGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SWAKASLRPSGSHGQMSGEQGQC*QQQQQQ
Trigger: CTGCTGCTGCTGCTGCTGCCAACATTGGCCCTGCTC...ACCTGACATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGTGTGCATGGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGACAGCCTGGCATCCTaGGACCGCTGCTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GVHGNSLAVSFMPGHGDTDSLAS*DRCCLS
Trigger: GCTCAGGCAGCAGCGGTCCCAGGATGCCAGGCTGTC...CGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACCATGCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCTGCGCATGCCACTCGGTGCTaGAGGCCAGCAAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EGRESPRRKYMNEWVTAAHATRC*RPASQD
Trigger: GTCCTGGCTTGCTGGCCTCCAGCACCGAGTGGCATG...CGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCTCTGGTGCACATaGAGCGTGCTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NSLAVSFMPGHGDTGRHCWLWCT*SVLCSS
Trigger: GCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCA...GCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGGCTCTGGTGCACATaGAGCGTGCTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GNSLAVSFMPGHGDTGRHWLWCT*SVLCSS
Trigger: GCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCA...GTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCTGGCTCTGGTGCACATaGAGCGTGCTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VCGCWPRMCHESSKAPVCWLWCT*SVLCSS
Trigger: GCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCA...GCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GAGTGGGGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGCTCAGGGCCTGCTGCTaGCTCTGGTGCACATGGAGC +
Preference number: 4 (lower is better)
Translates to: EWGREGRESPRRKYMNEWLRACC*LWCTWS
Trigger: GCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAG...CCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCCTGTGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCTCAGGGCCTGCTGCTaGCTCTGGTGCACATGGAGC +
Preference number: 4 (lower is better)
Translates to: SCVRMQPCQAQSRMLGESLRACC*LWCTWS
Trigger: GCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAG...ACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACACAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCTGCGCTTCTGAGGGAACAGTaGGGGCGCTGGGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: EGRESPRRKYMNEWVTAALLREQ*GRWAPC
Trigger: ACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAG...CGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCACCTGCTGGGTCTGGCTaGCCTTGGTCAGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: VSWAKASLRPSGSHGQMSPAGSG*PWSEGD
Trigger: ATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGG...TGACATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTCCTGCTGGGTCTGGCTaGCCTTGGTCAGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GLLLRATGTPSCWASSESPAGSG*PWSEGD
Trigger: ATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGG...ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCCCTGCTGGGTCTGGCTaGCCTTGGTCAGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: NSLAVSFMPGHGDTGRHCPAGSG*PWSEGD
Trigger: ATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGG...GCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCCCTGCTGGGTCTGGCTaGCCTTGGTCAGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: VCGCWPRMCHESSKAPVCPAGSG*PWSEGD
Trigger: ATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGG...GCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp TGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCCTCCCCAAGGTCCTaGTTTGAGGTCGGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: WFVGAGLGCATSPPRLLCASPRS*FEVGGS
Trigger: ACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGC...ACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp TTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTACCAGGGGTGCCCACCTaGCCCAGGGTATTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLLRATGTPSCWASSESLPGVPT*PRVFPG
Trigger: GCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGG...TAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCAAGAAGGCTAGTCCTTaGCACCACAAGGCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: SFMPGHGDTGRHCWHLLTKKASP*HHKAPR
Trigger: CCTCGGGGCCTTGTGGTGCCAAGGACTAGCCTTCTT...GGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCAAAGAAGGCTAGTCCTTaGCACCACAAGGCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: SSSVLHAGTWGHGQALLAKKASP*HHKAPR
Trigger: CCTCGGGGCCTTGTGGTGCCAAGGACTAGCCTTCTT...TGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTGGGAGGCAGCTTCCTCCTaGGTGCCTTCCTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: GARGLFGSHPRKPKAGEWEAASS*VPSLTG
Trigger: CCCAGTCAAGGAAGGCACCCAGGAGGAAGCTGCCTC...CCACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCACGCACACTCAGGGTCTaGTCCAGCCTGCAGATGAAC +
Preference number: 4 (lower is better)
Translates to: CGCWPRMCHESSKAPVCARTLRV*SSLQMN
Trigger: GTTCATCTGCAGGCTGGACCAGACCCTGAGTGTGCG...TGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp TCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCAGAGTCAGAGACCCTaGCCAAGGACTCCCCATCCG +
Preference number: 4 (lower is better)
Translates to: SGDTESETLAKDSPSGEVQSQRP*PRTPHP
Trigger: CGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTG...GACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGCAGAGTCAGAGACCCTaGCCAAGGACTCCCCATCCG +
Preference number: 4 (lower is better)
Translates to: SGLLLRATGTPSCWASSEQSQRP*PRTPHP
Trigger: CGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTG...CTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTCAGAGTCAGAGACCCTaGCCAAGGACTCCCCATCCG +
Preference number: 4 (lower is better)
Translates to: GLLLRATGTPSCWASSESQSQRP*PRTPHP
Trigger: CGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTG...ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CTGGGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGCAGAGTCAGAGACCCTaGCCAAGGACTCCCCATCCG +
Preference number: 4 (lower is better)
Translates to: LGARGLFGSHPRKPKAGEQSQRP*PRTPHP
Trigger: CGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTG...CTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR CCA 90 bp GAGGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCTCAGAACCGGTCAGCTaGGCCAAGGCCTCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: EAHTSEPVSWAKASLRPSSEPVS*AKASLR
Trigger: CCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGA...GCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCACTTCTGCCTACTCCTaGCACGTGACGGAGACCCCT +
Preference number: 4 (lower is better)
Translates to: SFMPGHGDTGRHCWHLLTTSAYS*HVTETP
Trigger: AGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGT...GGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAGGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCACTTCTGCCTACTCCTaGCACGTGACGGAGACCCCT +
Preference number: 4 (lower is better)
Translates to: EAHTSEPVSWAKASLRPSTSAYS*HVTETP
Trigger: AGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGT...GCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp TGGGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTTGTCTGTGCTCCTTCTaGGGGAACAGTGGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: WVQEVYLGAIPGSPRRGSCLCSF*GNSGGA
Trigger: AGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGACA...ACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR TCA 90 bp TGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTTGTCTGTGCTCCTTCTaGGGGAACAGTGGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: WFVGAGLGCATSPPRLLCCLCSF*GNSGGA
Trigger: AGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGACA...ACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR TCA 90 bp TACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATCCCAAGGTCCTGGTTTaGGGTCGGGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: YCCGQLGLHPAGHPLRVYPKVLV*GRGQWL
Trigger: CAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGG...ATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCTGCGGCTTGCCCAGTGCACTaGCTGAGCACACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EGRESPRRKYMNEWVTAAACPVH*LSTQLW
Trigger: CCACAGCTGTGTGCTCAGTCAGTGCACTGGGCAAGC...CGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp CCCCAAGGTCCTGGTTTGAGGTCGGGGGCAGTGGCTGCTCTCCACTGTCTTCCTTTCAGGCAAGACTGGTaGGACCCTGTGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PQGPGLRSGAVAALHCLPFRQDW*DPVLLL
Trigger: CAGAAGGAGCACAGGGTCTCACCAGTCTTGCCTGAA...AGGAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp GAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAATTGAGCCCAGGAGTTTaGAACCGGCCTGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: EPVSWAKASLRPSGSHGQLSPGV*NRPEQH
Trigger: ATGTTGCTCAGGCCGGTTGCAAACTCCTGGGCTCAA...TTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301671.12
CDS-3UTR GCA 90 bp TGTTTAGGGCTGCCAGACCCAGCAAGGTGGCCTGCAGAGAGGCCTCCCCAAGGTCCTGAGTGCAGATCCTaGCTCTGCCGCTTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: CLGLPDPARWPAERPPQGPECRS*LCRLLA
Trigger: AGCTAACAAGCGGCAGAGGCAGGATCTGCACTCAGG...ACCTTGGGGAGGCCTCTCTGCAGGCCACCTTGCTGGGTCTGGCAGCCCTAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR GCA 90 bp TCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCTCTCCACTGTCTTCCTaGTGGGTCTGGCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SGDTESETLAKDSPSGEVSPLSS*WVWLAL
Trigger: CAAGGCCAGCCAGACCCAGCAGGAAGACAGTGGAGA...GACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp ACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATTCTCCACTGTCTTCCTaGTGGGTCTGGCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TSEPVSWAKASLRPSGSHSPLSS*WVWLAL
Trigger: CAAGGCCAGCCAGACCCAGCAGGAAGACAGTGGAGA...ATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACAGAGTCACCACCACCTaGAGCTTTGGCCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: GNSLAVSFMPGHGDTGRHRVTTT*SFGQSR
Trigger: TCGGCTCTGGCCAAAGCTGCAGGTGGTGGTGACTCT...GTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GCACACAGCTGTGGCCACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATTGGGCCAGGTGCCTGTaGCGAAGGACCCGGGGCATC +
Preference number: 4 (lower is better)
Translates to: AHSCGHQRTSLGCDTGNHWARCL*RRTRGI
Trigger: GATGCCCCGGGTCCTTCGGCACAGGCACCTGGCCCA...ATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGTGGCCACAGCTGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTGTCACAGCCCACTTCTaGCTACTCCTGGCACGTGAC +
Preference number: 4 (lower is better)
Translates to: GLLLRATGTPSCWASSESVTAHF*LLLARD
Trigger: GTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGAC...ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGTGCGCATGCAGCCTTaGCAGGCCCAGAGCAGAATG +
Preference number: 4 (lower is better)
Translates to: WFVGAGLGCATSPPRLLCVRMQP*QAQSRM
Trigger: CATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCAC...ACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp TGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGGAGTGCTGGCCTAGGATGTaGCACGAGTCCTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: CACSLARPRAECWGKVLECWPRM*HESSKA
Trigger: AGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCA...CTCCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATAGTCGCAGCTACTTaGGAGGCTGAGATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: EPVSWAKASLRPSGSHGQIVAAT*EAEMGG
Trigger: TCCTCCCATCTCAGCCTCCCAAGTAGCTGCGACTAT...TTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301671.12
CDS-3UTR CCA 90 bp GGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTGCGGCGATGCCTTATGCATGCCACTCGGTGCTaGAGGCCAGCAAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GTVNPDGLRSCFLRRCLMHATRC*RPASQD
Trigger: GTCCTGGCTTGCTGGCCTCCAGCACCGAGTGGCATG...CATAAGGCATCGCCGCAGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTGCGGCGATGCCTTATGGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCAC +
Preference number: 4 (lower is better)
Translates to: GTVNPDGLRSCFLRRCLMEQWGR*APCRHH
Trigger: GTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTC...CATAAGGCATCGCCGCAGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp TTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTACAGTGCCCTCAGCCCTaGGGACCTCAGTGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLLRATGTPSCWASSESLQCPQP*GPQCVQ
Trigger: CTGGACGCACTGAGGTCCCCAGGGCTGAGGGCACTG...TAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCCACCACCTGCAGCTTTaGCCAGAGCCGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: YMNEWVTAAGNWDSILLGHHLQL*PEPKGQ
Trigger: CTGGCCCTTCGGCTCTGGCCAAAGCTGCAGGTGGTG...GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCAAGAAGGCTAGTCCTTaGCACCACAAGGCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: NSLAVSFMPGHGDTGRHCKKASP*HHKAPR
Trigger: CCTCGGGGCCTTGTGGTGCCAAGGACTAGCCTTCTT...GCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CCTGTGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCAAGAAGGCTAGTCCTTaGCACCACAAGGCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: PVCACSLARPRAECWGKVKKASP*HHKAPR
Trigger: CCTCGGGGCCTTGTGGTGCCAAGGACTAGCCTTCTT...GACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp AGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTGGTGCCTTCCTTGACTaGGAGCAGCTCGATAAAGGG +
Preference number: 4 (lower is better)
Translates to: SVLHAGTWGHGQALLASAGAFLD*EQLDKG
Trigger: CCCTTTATCGAGCTGCTCCCAGTCAAGGAAGGCACC...AGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCTGGGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGAGGCAGCTTCCTCCTaGGTGCCTTCCTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: SGCKRFIWEPSQEAQGGGEAASS*VPSLTG
Trigger: CCCAGTCAAGGAAGGCACCCAGGAGGAAGCTGCCTC...TCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587427.6
CDS-3UTR CCA 90 bp GGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTGCGGCGATGCCTTATGCGGCCAAAAGGAGGGTaGAGGCAGCTTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GTVNPDGLRSCFLRRCLMRPKGG*RQLPPG
Trigger: CCCAGGAGGAAGCTGCCTCCACCCTCCTTTTGGCCG...CATAAGGCATCGCCGCAGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTCGCACACTCAGGGTCTaGTCCAGCCTGCAGATGAAC +
Preference number: 4 (lower is better)
Translates to: GLLLRATGTPSCWASSESRTLRV*SSLQMN
Trigger: GTTCATCTGCAGGCTGGACCAGACCCTGAGTGTGCG...ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCCGTGACGGAGACCCCTaGGTGACTCTGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: YMNEWVTAAGNWDSILLGRDGDP*VTLGLS
Trigger: GCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACG...GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTGGACTTCTGCCTACTCCTaGCACGTGACGGAGACCCCT +
Preference number: 4 (lower is better)
Translates to: GARGLFGSHPRKPKAGEWTSAYS*HVTETP
Trigger: AGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGT...CCACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGGAGACTTCTGCCTACTCCTaGCACGTGACGGAGACCCCT +
Preference number: 4 (lower is better)
Translates to: CACSLARPRAECWGKVLETSAYS*HVTETP
Trigger: AGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGT...CTCCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp TGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGGGTTGGGGGAAAGTCCTaGAGCTCAGTGGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: CAHAALPGPEQNVGGKSWVGGKS*SSVGEW
Trigger: CCATTCCCCCACTGAGCTCCAGGACTTTCCCCCAAC...CCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp CCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGCAGCCTTGCCCCCAGAGCAGAATGTTaGGGGAAAGTCCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PRMCHESSKAPVCACSLAPRAEC*GKVLEL
Trigger: GAGCTCCAGGACTTTCCCCCAACATTCTGCTCTGGG...GGCAAGGCTGCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCTCCCCACCGCAGAAGTaGTTTGTGGGTGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: VCGCWPRMCHESSKAPVCSPPQK*FVGAGL
Trigger: TAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGA...GCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR TCA 90 bp GTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCAGGCAGGAGAATCACTTaGGCCCAGGAGTTTGCAACC +
Preference number: 4 (lower is better)
Translates to: VSWAKASLRPSGSHGQMSGRRIT*AQEFAT
Trigger: GGTTGCAAACTCCTGGGCTCAAGTGATTCTCCTGCC...TGACATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301671.12
CDS-3UTR TCA 90 bp CCAAGGGGATGTAAGCGTCACACGGGCAGTGCGTCCCTGAGCCAGCACTTCTGGCTGAGCTCTGTTTCCTaGTCTGTCACAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: PRGCKRHTGSASLSQHFWLSSVS*SVTAHF
Trigger: GAAGTGGGCTGTGACAGATCAGGAAACAGAGCTCAG...CCAGAAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGCTTACATCCCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR TCA 90 bp GACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACACACATACTTCCGGTaGATGGGCAGCTGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: DTGRHCWHLLTPEAHTSEHTYFR*MGSCQV
Trigger: GACTTGGCAGCTGCCCATTCACCGGAAGTATGTGTG...TTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
CDS-3UTR TCA 90 bp ACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATCACACATACTTCCGGTaGATGGGCAGCTGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: TSEPVSWAKASLRPSGSHHTYFR*MGSCQV
Trigger: GACTTGGCAGCTGCCCATTCACCGGAAGTATGTGTG...ATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
CDS-3UTR GCA 90 bp TTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTACACCTCAGGGCCTGCTaGTGGCTCTGGTGCACATGG +
Preference number: 4 (lower is better)
Translates to: LLLRATGTPSCWASSESLHLRAC*WLWCTW
Trigger: CCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTG...TAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCTGCGTCTCCACTGTCTTCCTaGTGGGTCTGGCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: EGRESPRRKYMNEWVTAASPLSS*WVWLAL
Trigger: CAAGGCCAGCCAGACCCAGCAGGAAGACAGTGGAGA...CGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATGTCGGGGGCAGTGGCTaGTCTCCACTGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: YCCGQLGLHPAGHPLRVYVGGSG*SPLSSC
Trigger: GCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGAC...ATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATCCTTGGTTCCAGGGGTaGCCACCTGGCCCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: YCCGQLGLHPAGHPLRVYPWFQG*PPGPGY
Trigger: ATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGG...ATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGGTTGCCGTCCCAGCCTCCAGTaGCCTCAGCCCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: SCSRTMKLRSCSLLTQGCRPSLQ*PQPWGP
Trigger: AGGTCCCCAGGGCTGAGGGCACTGGAGGCTGGGACG...GCAACCCTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGCAGTGAGTCCCCGTGGCCCCTaGTCTAGGGCCTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LWAVIQETIGVHGNSLAVSPRGP*SRASRS
Trigger: GCTCCGGGAGGCCCTAGAGCAGGGGCCACGGGGACT...CACTGCTAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATCCAGCTCATACTCCTTaGCCTGCTGGGCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: YCCGQLGLHPAGHPLRVYPAHTP*PAGPRP
Trigger: TGGCCGAGGCCCAGCAGGGCAAGGAGTATGAGCTGG...ATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGGTTGCTGGCAGGGCCCACGCTaGCCCAGAACCGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: SCSRTMKLRSCSLLTQGCWQGPR*PRTAGT
Trigger: AGTCCCTGCGGTTCTGGGGCAGCGTGGGCCCTGCCA...GCAACCCTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACACTGGGACTCCATCCTaGTGGGCATCCTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: GNSLAVSFMPGHGDTGRHTGTPS*WASSES
Trigger: ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGT...GTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp AAGTGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGGTCACAGCCCACTTCTaGCTACTCCTGGCACGTGAC +
Preference number: 4 (lower is better)
Translates to: KWFVGAGLGCATSPPRLLVTAHF*LLLARD
Trigger: GTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGAC...CAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GAAGTAATAGCTCTCCCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTGGCCTACTTCTGAGGGAACAGTaGGGGCGCTGGGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: EVIALPSPPQKWFVGAGLLLREQ*GRWAPC
Trigger: ACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAG...TAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGGGAGAGCTATTACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCCTCCCCAAGGTCCTaGTTTGAGGTCGGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GREGRESPRRKYMNEWVTASPRS*FEVGGS
Trigger: ACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGC...AGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTACACCACCTGCAGCTTTaGCCAGAGCCGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLLRATGTPSCWASSESLHHLQL*PEPKGQ
Trigger: CTGGCCCTTCGGCTCTGGCCAAAGCTGCAGGTGGTG...TAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTCTCTCCTGCAGACACTaGGCCAGGTGCCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GREGRESPRRKYMNEWVTLSCRH*ARCLCR
Trigger: TCGGCACAGGCACCTGGCCCAGTGTCTGCAGGAGAG...AGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAGTGGGGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGTCAGAACCGGTCAGCTaGGCCAAGGCCTCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: EWGREGRESPRRKYMNEWSEPVS*AKASLR
Trigger: CCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGA...CCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTCTGAGCACACAGCTGTaGCCACCAGAGAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: GQALLASANPGGPYFRTGLSTQL*PPENLF
Trigger: AAAGAGGTTCTCTGGTGGCCACAGCTGTGTGCTCAG...ACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCTGAGCACACAGCTGTaGCCACCAGAGAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: SFMPGHGDTGRHCWHLLTLSTQL*PPENLF
Trigger: AAAGAGGTTCTCTGGTGGCCACAGCTGTGTGCTCAG...GGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATCGTGACGGAGACCCCTaGGTGACTCTGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: YCCGQLGLHPAGHPLRVYRDGDP*VTLGLS
Trigger: GCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACG...ATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GAGGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCTTTAGTGGGCTGCACTaGGCTCTGTTTCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: EAHTSEPVSWAKASLRPSFSGLH*ALFPDL
Trigger: CAGATCAGGAAACAGAGCTCAGTGCAGCCCACTAAA...GCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR TCA 90 bp TTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATGTCTGTGCTCCTTCTaGGGGAACAGTGGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LLLRATGTPSCWASSESLCLCSF*GNSGGA
Trigger: AGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGACA...TAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACGTCTCGATTTTCCTCTaGCAGATTCCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GNSLAVSFMPGHGDTGRHVSIFL*QIPQPP
Trigger: AGGGGGCTGAGGAATCTGTCAGAGGAAAATCGAGAC...GTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp AGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCAGGTGTCTCGATTTTCCTCTaGCAGATTCCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SWAKASLRPSGSHGQMSGVSIFL*QIPQPP
Trigger: AGGGGGCTGAGGAATCTGTCAGAGGAAAATCGAGAC...ACCTGACATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp CCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTGTCTCGATTTTCCTCTaGCAGATTCCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PSPPQKWFVGAGLGCATSVSIFL*QIPQPP
Trigger: AGGGGGCTGAGGAATCTGTCAGAGGAAAATCGAGAC...ACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR TCA 90 bp ACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATTGGGCAAATGTCAGGTaGCACAGAGTCAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: TSEPVSWAKASLRPSGSHWANVR*HRVRDP
Trigger: AGGGTCTCTGACTCTGTGTCACCTGACATTTGCCCA...ATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp AGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGTGGGCAAATGTCAGGTaGCACAGAGTCAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: SGLLLRATGTPSCWASSEWANVR*HRVRDP
Trigger: AGGGTCTCTGACTCTGTGTCACCTGACATTTGCCCA...CTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp TGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGGCTGAGCTCTGTTTCCTaGTCTGTCACAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: CAHAALPGPEQNVGGKSWLSSVS*SVTAHF
Trigger: GAAGTGGGCTGTGACAGATCAGGAAACAGAGCTCAG...CCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp GAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCTGCGCCTGAGTGCAGATCCTaGCTCTGCCGCTTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: EGRESPRRKYMNEWVTAAPECRS*LCRLLA
Trigger: AGCTAACAAGCGGCAGAGGCAGGATCTGCACTCAGG...CGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR GCA 90 bp TCCTGTGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGAGTGCAGATCCTaGCTCTGCCGCTTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: SCVRMQPCQAQSRMLGESPECRS*LCRLLA
Trigger: AGCTAACAAGCGGCAGAGGCAGGATCTGCACTCAGG...ACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACACAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp AAGTACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGCATCCTGGGACCGCTaGTGCCTGAGCAGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: KYMNEWVTAAGNWDSILLASWDR*CLSRAN
Trigger: ATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGATGC...CAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GAATTGTCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGTCCAGCCTCCGCCGCTaGCAGGTGGCTGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: ELSCSRTMKLRSCSLLTQSSLRR*QVAAQT
Trigger: GGTCTGGGCAGCCACCTGGCAGCGGCGGAGGCTGGA...CTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGACAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGGTTGCGGTGCACATGGAGCGTaGTCTGCTCCAGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SCSRTMKLRSCSLLTQGCGAHGA*SAPASA
Trigger: GGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACC...GCAACCCTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp ACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACCCCTGGGGACCTCAGTaGGTCCAGCAGCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: TREPLWAVIQETIGVHGNPWGPQ*VQQQGP
Trigger: AGGGCCCTGCTGCTGGACGCACTGAGGTCCCCAGGG...GTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp ACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACCGTCCCAGCCTCCAGTaGCCTCAGCCCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: TREPLWAVIQETIGVHGNRPSLQ*PQPWGP
Trigger: AGGTCCCCAGGGCTGAGGGCACTGGAGGCTGGGACG...GTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAAGTCCCCGTGGCCCCTaGTCTAGGGCCTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLSPRGP*SRASRS
Trigger: GCTCCGGGAGGCCCTAGAGCAGGGGCCACGGGGACT...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GTATGGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTGCGGCGATGCCTTCATACTCCTTGCCCTaGTGGGCCTCGGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: VWNSEPRWSPELLPAAMPSYSLP*WASAKR
Trigger: CCTTTTGGCCGAGGCCCAGCAGGGCAAGGAGTATGA...AGGCATCGCCGCAGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGAGGGCTGCCCGGAGTaGTCGGAAGGCTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLEGCPE*SEGSLP
Trigger: GGGCAGGGAGCCTTCCGAGCACTCCGGGCAGCCCTC...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCGGGTCCATGCCCACATaGACCTGTCACAGCCCACTT +
Preference number: 4 (lower is better)
Translates to: YMNEWVTAAGNWDSILLGGSMPT*TCHSPL
Trigger: AAGTGGGCTGTGACAGGTGCATGTGGGCATGGACCC...GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428494.6
CDS-3UTR CCA 90 bp GGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTTGGCTCTGGTGCACATaGAGCGTGCTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GREGRESPRRKYMNEWVTWLWCT*SVLCSS
Trigger: GCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCA...AGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCTGCGGGTGCCTTCCTTGACTaGGAGCAGCTCGATAAAGGG +
Preference number: 4 (lower is better)
Translates to: EGRESPRRKYMNEWVTAAGAFLD*EQLDKG
Trigger: CCCTTTATCGAGCTGCTCCCAGTCAAGGAAGGCACC...CGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGGTGCCTTCCTTGACTaGGAGCAGCTCGATAAAGGG +
Preference number: 4 (lower is better)
Translates to: WFVGAGLGCATSPPRLLCGAFLD*EQLDKG
Trigger: CCCTTTATCGAGCTGCTCCCAGTCAAGGAAGGCACC...ACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GAAGTAATAGCTCTCCCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGAGGCAGCTTCCTCCTaGGTGCCTTCCTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: EVIALPSPPQKWFVGAGLEAASS*VPSLTG
Trigger: CCCAGTCAAGGAAGGCACCCAGGAGGAAGCTGCCTC...TAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGGGAGAGCTATTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GGTGTGCATGGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGCGCACACTCAGGGTCTaGTCCAGCCTGCAGATGAAC +
Preference number: 4 (lower is better)
Translates to: GVHGNSLAVSFMPGHGDTRTLRV*SSLQMN
Trigger: GTTCATCTGCAGGCTGGACCAGACCCTGAGTGTGCG...CGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACCATGCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AAGTACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGCTCTCCTGCAGACACTaGGCCAGGTGCCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: KYMNEWVTAAGNWDSILLLSCRH*ARCLCR
Trigger: TCGGCACAGGCACCTGGCCCAGTGTCTGCAGGAGAG...CAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCTCAGAACCGGTCAGCTaGGCCAAGGCCTCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: YMNEWVTAAGNWDSILLGSEPVS*AKASLR
Trigger: CCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGA...GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCAGGTCTGAGCACACAGCTGTaGCCACCAGAGAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: SWAKASLRPSGSHGQMSGLSTQL*PPENLF
Trigger: AAAGAGGTTCTCTGGTGGCCACAGCTGTGTGCTCAG...ACCTGACATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GCACACAGCTGTGGCCACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATACTGCTGCGGGCAACTaGGACTCCATCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AHSCGHQRTSLGCDTGNHTAAGN*DSILLG
Trigger: GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGT...ATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGTGGCCACAGCTGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGAAGTACATGAATGAGTaGGTTACTGCTGCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: GPYFRTGQLGQGLSKAQRKYMNE*VTAAGN
Trigger: GTTGCCCGCAGCAGTAACCCACTCATTCATGTACTT...CCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTCATACTTCCGGTGAATaGGCAGCTGCCAAGTCTAGT +
Preference number: 4 (lower is better)
Translates to: SVLHAGTWGHGQALLASAHTSGE*AAAKSS
Trigger: ACTAGACTTGGCAGCTGCCCATTCACCGGAAGTATG...AGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
CDS-3UTR TCA 90 bp ACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATTTTAGTGGGCTGCACTaGGCTCTGTTTCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: TSEPVSWAKASLRPSGSHFSGLH*ALFPDL
Trigger: CAGATCAGGAAACAGAGCTCAGTGCAGCCCACTAAA...ATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR TCA 90 bp AAGCGTCACACGGGCAGTGCGTCCCTGAGCCAGCACTTCTGGGTAGGCCTTGTTTTTAGTGGGCTGCACTaGGCTCTGTTTCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: KRHTGSASLSQHFWVGLVFSGLH*ALFPDL
Trigger: CAGATCAGGAAACAGAGCTCAGTGCAGCCCACTAAA...AACAAGGCCTACCCAGAAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS-3UTR TCA 90 bp GTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCTTGGTCAGAGGGAGATaGTTCCGGAAGGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: VCGCWPRMCHESSKAPVCLVRGR*FRKVLM
Trigger: CATAAGCACCTTCCGGAATCATCTCCCTCTGACCAA...GCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR TCA 90 bp TCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGGTTGCACGGAGACCCCTGGGTaGCTCTGGGTCTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: SCSRTMKLRSCSLLTQGCTETPG*LWVSAH
Trigger: GTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGT...GCAACCCTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GAGTGGGGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGCCGCAGAGGAATCTGTaGATAGACCCCATGTGCACA +
Preference number: 4 (lower is better)
Translates to: EWGREGRESPRRKYMNEWPQRNL*IDPMCT
Trigger: TGTGCACATGGGGTCTATTCACAGATTCCTCTGCGG...CCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
CDS-3UTR TCA 90 bp TGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGCGGCGATGCCTTATaGTGTGAAGTAATAGCTCTC +
Preference number: 4 (lower is better)
Translates to: CGCWPRMCHESSKAPVCACGDAL*CEVIAL
Trigger: GAGAGCTATTACTTCACATCATAAGGCATCGCCGCA...TGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp GACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGAGCAATTTAGTGGGCTaGACTGAGCTCTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: DTESETLAKDSPSGEVPESNLVG*TELCFL
Trigger: CAGGAAACAGAGCTCAGTGCAGCCCACTAAATTGCT...CTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR GCA 90 bp GGTGTGCATGGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGCCTGAGTGCAGATCCTaGCTCTGCCGCTTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GVHGNSLAVSFMPGHGDTPECRS*LCRLLA
Trigger: AGCTAACAAGCGGCAGAGGCAGGATCTGCACTCAGG...CGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACCATGCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR GCA 90 bp AAGTACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGTCCTGGGACCGCTGCTaGCTGAGCAGGGCCAATGTT +
Preference number: 4 (lower is better)
Translates to: KYMNEWVTAAGNWDSILLSWDRC*LSRANV
Trigger: AACATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGA...CAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCAGTCCCCGTGGCCCCTaGTCTAGGGCCTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PAGHPLRVYVEYTSELSCSPRGP*SRASRS
Trigger: GCTCCGGGAGGCCCTAGAGCAGGGGCCACGGGGACT...GCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTTCATACTCCTTGCCCTaGTGGGCCTCGGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: GREGRESPRRKYMNEWVTSYSLP*WASAKR
Trigger: CCTTTTGGCCGAGGCCCAGCAGGGCAAGGAGTATGA...AGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATGTCACAGCCCACTTCTaGCTACTCCTGGCACGTGAC +
Preference number: 4 (lower is better)
Translates to: YCCGQLGLHPAGHPLRVYVTAHF*LLLARD
Trigger: GTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGAC...ATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTACCAGGGGTGCCCACCTaGCCCAGGGTATTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLPGVPT*PRVFPG
Trigger: GCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGG...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp ACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACGCCACAGCCTCGGCCTaGCCTCCTGCATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: TREPLWAVIQETIGVHGNATASA*PPASRV
Trigger: GACTCTGGATGCAGGAGGCCAGGCCGAGGCTGTGGC...GTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACACGGGCAGGCACGATGAACCTGACGACTaGACACTGATTGTAGGCACC +
Preference number: 4 (lower is better)
Translates to: GNSLAVSFMPGHGDTGRHDEPDD*TLIVGT
Trigger: GGTGCCTACAATCAGTGTCCAGTCGTCAGGTTCATC...GTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTGATGAACCTGACGACTaGACACTGATTGTAGGCACC +
Preference number: 4 (lower is better)
Translates to: GLLLRATGTPSCWASSESDEPDD*TLIVGT
Trigger: GGTGCCTACAATCAGTGTCCAGTCGTCAGGTTCATC...ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp ACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGATGAACCTGACGACTaGACACTGATTGTAGGCACC +
Preference number: 4 (lower is better)
Translates to: TSEPVSWAKASLRPSGSHDEPDD*TLIVGT
Trigger: GGTGCCTACAATCAGTGTCCAGTCGTCAGGTTCATC...ATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTGGTGCAAGAGGTTTATTTaGGAGCCATCCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GARGLFGSHPRKPKAGEWCKRFI*EPSQEA
Trigger: GGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCA...CCACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCAGGTTGCAAGAGGTTTATTTaGGAGCCATCCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SWAKASLRPSGSHGQMSGCKRFI*EPSQEA
Trigger: GGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCA...ACCTGACATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCTGCAAGAGGTTTATTTaGGAGCCATCCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SGDTESETLAKDSPSGEVCKRFI*EPSQEA
Trigger: GGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCA...GACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp AGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCAGGTCATACTTCCGGTGAATaGGCAGCTGCCAAGTCTAGT +
Preference number: 4 (lower is better)
Translates to: SWAKASLRPSGSHGQMSGHTSGE*AAAKSS
Trigger: ACTAGACTTGGCAGCTGCCCATTCACCGGAAGTATG...ACCTGACATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
CDS-3UTR CCA 90 bp GAAGTAATAGCTCTCCCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGTGGTTTGTGGGTGCTaGCCTAGGATGTGCCACGAG +
Preference number: 4 (lower is better)
Translates to: EVIALPSPPQKWFVGAGLVVCGC*PRMCHE
Trigger: CTCGTGGCACATCCTAGGCCAGCACCCACAAACCAC...TAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGGGAGAGCTATTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp TGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGGAACAGTGAACCCAGATaGTCTCCGGAGTTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: CAHAALPGPEQNVGGKSWNSEPR*SPELLP
Trigger: AGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTT...CCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR TCA 90 bp CAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTGGGACCGCTGCTGCCTaGGCAGGGCCAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QLGLHPAGHPLRVYVEYTGTAAA*AGPMLA
Trigger: TGCCAACATTGGCCCTGCTCAGGCAGCAGCGGTCCC...AGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GAATTGTCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGGGACCGCTGCTGCCTaGGCAGGGCCAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: ELSCSRTMKLRSCSLLTQGTAAA*AGPMLA
Trigger: TGCCAACATTGGCCCTGCTCAGGCAGCAGCGGTCCC...CTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGACAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp CAAATGTCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGTCTCGATTTTCCTCTaGCAGATTCCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: QMSGDTESETLAKDSPSGVSIFL*QIPQPP
Trigger: AGGGGGCTGAGGAATCTGTCAGAGGAAAATCGAGAC...TCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGACATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp CCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGATTAGTATGGAACAGTaGACCCAGATGGTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PQKWFVGAGLGCATSPPRISMEQ*TQMVSG
Trigger: TCCGGAGACCATCTGGGTTCACTGTTCCATACTAAT...CCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAACCACTTCTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp GCACACAGCTGTGGCCACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATAGTGAGCCAAGATCGTaGCACTGCACCCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AHSCGHQRTSLGCDTGNHSEPRS*HCTPAW
Trigger: CCAAGCTGGGGTGCAGTGGCACGATCTTGGCTCACT...ATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGTGGCCACAGCTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301671.12
CDS-3UTR GCA 90 bp AGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGCAATTTAGTGGGCTaGACTGAGCTCTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SGLLLRATGTPSCWASSESNLVG*TELCFL
Trigger: CAGGAAACAGAGCTCAGTGCAGCCCACTAAATTGCT...CTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR GCA 90 bp TTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTACCTGAGTGCAGATCCTaGCTCTGCCGCTTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: LLLRATGTPSCWASSESLPECRS*LCRLLA
Trigger: AGCTAACAAGCGGCAGAGGCAGGATCTGCACTCAGG...TAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR GCA 90 bp TCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGGTTGCTCCTGGGACCGCTGCTaGCTGAGCAGGGCCAATGTT +
Preference number: 4 (lower is better)
Translates to: SCSRTMKLRSCSLLTQGCSWDRC*LSRANV
Trigger: AACATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGA...GCAACCCTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GTTTCCTCATTAGTATGGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTACATGGAGCGTGCTCTaGTCCAGCCTCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VSSLVWNSEPRWSPELLPTWSVL*SSLRRC
Trigger: GCAGCGGCGGAGGCTGGAGCAGAGCACGCTCCATGT...AGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCCATACTAATGAGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp ACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACCACCTCAGGGCCTGCTaGTGGCTCTGGTGCACATGG +
Preference number: 4 (lower is better)
Translates to: TREPLWAVIQETIGVHGNHLRAC*WLWCTW
Trigger: CCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTG...GTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTGGGATGATTCCGGAAGGTaGTTATGTCTGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GARGLFGSHPRKPKAGEWDDSGR*LCLCSF
Trigger: GAAGGAGCACAGACATAAGCACCTTCCGGAATCATC...CCACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CCTGTGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCGATGATTCCGGAAGGTaGTTATGTCTGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PVCACSLARPRAECWGKVDDSGR*LCLCSF
Trigger: GAAGGAGCACAGACATAAGCACCTTCCGGAATCATC...GACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp ACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACGCGTCACACGGGCAGTaGGTCCCTGAGCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: TREPLWAVIQETIGVHGNASHGQ*VPEPAL
Trigger: AAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGC...GTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTGGGCCAGGTGCCTGTaGCGAAGGACCCGGGGCATC +
Preference number: 4 (lower is better)
Translates to: PAGHPLRVYVEYTSELSCWARCL*RRTRGI
Trigger: GATGCCCCGGGTCCTTCGGCACAGGCACCTGGCCCA...GCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGCAGTGGACACCACCCTCTCCTaGAGACACTGGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LWAVIQETIGVHGNSLAVDTTLS*RHWARC
Trigger: GCACCTGGCCCAGTGTCTGCAGGAGAGGGTGGTGTC...CACTGCTAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp AGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAAGTCTAGTGTCCTCTaGCCTATCTGTTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SGLLLRATGTPSCWASSEKSSVL*PICSSP
Trigger: TGGGGAAGAACAGATAGGGCAGAGGACACTAGACTT...CTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
CDS-3UTR GCA 90 bp GCACACAGCTGTGGCCACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATAGGCTGTGGGGTCCATaGCCACATGCACCTGTCACA +
Preference number: 4 (lower is better)
Translates to: AHSCGHQRTSLGCDTGNHRLWGP*PHAPVT
Trigger: TGTGACAGGTGCATGTGGGCATGGACCCCACAGCCT...ATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGTGGCCACAGCTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428494.6
CDS-3UTR CCA 90 bp CTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGCAGTGCATGCCACTCGGTGCTaGAGGCCAGCAAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LWAVIQETIGVHGNSLAVHATRC*RPASQD
Trigger: GTCCTGGCTTGCTGGCCTCCAGCACCGAGTGGCATG...CACTGCTAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp ACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACGCCTGCTGCTGGCTCTaGTGCACATGGAGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: TREPLWAVIQETIGVHGNACCWL*CTWSVL
Trigger: GAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGC...GTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp ACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACCTTCTGAGGGAACAGTaGGGGCGCTGGGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TREPLWAVIQETIGVHGNLLREQ*GRWAPC
Trigger: ACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAG...GTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGCCACAGCCTCGGCCTaGCCTCCTGCATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLATASA*PPASRV
Trigger: GACTCTGGATGCAGGAGGCCAGGCCGAGGCTGTGGC...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TGGGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTGATGAACCTGACGACTaGACACTGATTGTAGGCACC +
Preference number: 4 (lower is better)
Translates to: WVQEVYLGAIPGSPRRGSDEPDD*TLIVGT
Trigger: GGTGCCTACAATCAGTGTCCAGTCGTCAGGTTCATC...ACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR CCA 90 bp CAAATGTCAGGTGACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGACTGAGCACACAGCTGTaGCCACCAGAGAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: QMSGDTESETLAKDSPSGLSTQL*PPENLF
Trigger: AAAGAGGTTCTCTGGTGGCCACAGCTGTGTGCTCAG...TCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTCACCTGACATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TGGGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTTGCAAGAGGTTTATTTaGGAGCCATCCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: WVQEVYLGAIPGSPRRGSCKRFI*EPSQEA
Trigger: GGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCA...ACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR TCA 90 bp GGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGTCTCGATTTTCCTCTaGCAGATTCCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GREGRESPRRKYMNEWVTVSIFL*QIPQPP
Trigger: AGGGGGCTGAGGAATCTGTCAGAGGAAAATCGAGAC...AGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCACATGGAGCGTGCTCTaGTCCAGCCTCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PAGHPLRVYVEYTSELSCTWSVL*SSLRRC
Trigger: GCAGCGGCGGAGGCTGGAGCAGAGCACGCTCCATGT...GCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GTTTCCTCATTAGTATGGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTCCTTGGTTCCAGGGGTaGCCACCTGGCCCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: VSSLVWNSEPRWSPELLPPWFQG*PPGPGY
Trigger: ATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGG...AGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCCATACTAATGAGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR GCA 90 bp TCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGGTTGCAGAGTCACCACCACCTaGAGCTTTGGCCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: SCSRTMKLRSCSLLTQGCRVTTT*SFGQSR
Trigger: TCGGCTCTGGCCAAAGCTGCAGGTGGTGGTGACTCT...GCAACCCTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGGTTGCTCATACTCCTTGCCCTaGTGGGCCTCGGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SCSRTMKLRSCSLLTQGCSYSLP*WASAKR
Trigger: CCTTTTGGCCGAGGCCCAGCAGGGCAAGGAGTATGA...GCAACCCTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCAGACACTGGGCCAGGTaGCTGTGCCGAAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: PAGHPLRVYVEYTSELSCRHWAR*LCRRTR
Trigger: CCGGGTCCTTCGGCACAGGCACCTGGCCCAGTGTCT...GCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTGACACCACCCTCTCCTaGAGACACTGGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QLGLHPAGHPLRVYVEYTDTTLS*RHWARC
Trigger: GCACCTGGCCCAGTGTCTGCAGGAGAGGGTGGTGTC...AGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GCACACAGCTGTGGCCACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATACTGGGACTCCATCCTaGTGGGCATCCTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: AHSCGHQRTSLGCDTGNHTGTPS*WASSES
Trigger: ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGT...ATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGTGGCCACAGCTGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTACAAGCCAGGACAGCCTaGCATCCTGGGACCGCTGCT +
Preference number: 4 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLQARTA*HPGTAA
Trigger: AGCAGCGGTCCCAGGATGCCAGGCTGTCCTGGCTTG...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GTTTCCTCATTAGTATGGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTCAAGCCAGGACAGCCTaGCATCCTGGGACCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSSLVWNSEPRWSPELLPQARTA*HPGTAA
Trigger: AGCAGCGGTCCCAGGATGCCAGGCTGTCCTGGCTTG...AGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCCATACTAATGAGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGCCTGCTGCTGGCTCTaGTGCACATGGAGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLACCWL*CTWSVL
Trigger: GAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGC...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GTTTCCTCATTAGTATGGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTGCCTGCTGCTGGCTCTaGTGCACATGGAGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: VSSLVWNSEPRWSPELLPACCWL*CTWSVL
Trigger: GAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGC...AGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCCATACTAATGAGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTACTCAGGGCCTGCTGCTaGCTCTGGTGCACATGGAGC +
Preference number: 4 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLLRACC*LWCTWS
Trigger: GCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAG...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAATTGTCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGCGGCCAAAAGGAGGGTaGAGGCAGCTTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ELSCSRTMKLRSCSLLTQRPKGG*RQLPPG
Trigger: CCCAGGAGGAAGCTGCCTCCACCCTCCTTTTGGCCG...CTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGACAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTCGGCCAAAAGGAGGGTaGAGGCAGCTTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLGLHPAGHPLRVYVEYTRPKGG*RQLPPG
Trigger: CCCAGGAGGAAGCTGCCTCCACCCTCCTTTTGGCCG...AGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCACCTACTCCTGGCACGTaGCGGAGACCCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSPTPGT*RRPLGD
Trigger: GTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGG...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCCACCTCAGGGCCTGCTaGTGGCTCTGGTGCACATGG +
Preference number: 4 (lower is better)
Translates to: PAGHPLRVYVEYTSELSCHLRAC*WLWCTW
Trigger: CCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTG...GCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGAGCAGGGCCAATGTTaGCAGCAGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLEQGQC*QQQQQQ
Trigger: CTGCTGCTGCTGCTGCTGCCAACATTGGCCCTGCTC...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAGACAGCCTGGCATCCTaGGACCGCTGCTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSDSLAS*DRCCLS
Trigger: GCTCAGGCAGCAGCGGTCCCAGGATGCCAGGCTGTC...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCCTTCTGAGGGAACAGTaGGGGCGCTGGGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PAGHPLRVYVEYTSELSCLLREQ*GRWAPC
Trigger: ACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAG...GCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGGTTGCGGTGCCTTCCTTGACTaGGAGCAGCTCGATAAAGGG +
Preference number: 4 (lower is better)
Translates to: SCSRTMKLRSCSLLTQGCGAFLD*EQLDKG
Trigger: CCCTTTATCGAGCTGCTCCCAGTCAAGGAAGGCACC...GCAACCCTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAAGTAATAGCTCTCCCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGATGAACCTGACGACTaGACACTGATTGTAGGCACC +
Preference number: 4 (lower is better)
Translates to: EVIALPSPPQKWFVGAGLDEPDD*TLIVGT
Trigger: GGTGCCTACAATCAGTGTCCAGTCGTCAGGTTCATC...TAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGGGAGAGCTATTACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp TACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCAAGTACATGAATGAGTaGGTTACTGCTGCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: YMNEWVTAAGNWDSILLGKYMNE*VTAAGN
Trigger: GTTGCCCGCAGCAGTAACCCACTCATTCATGTACTT...GCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGCAGTGTCTCCAAGCAGCTCCTaGGAAGAGCCTGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LWAVIQETIGVHGNSLAVSPSSS*EEPVPA
Trigger: AGCTGGGACAGGCTCTTCCCAGGAGCTGCTTGGAGA...CACTGCTAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428494.6
CDS-3UTR GCA 90 bp CCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCCTGGGACCGCTGCTaGCTGAGCAGGGCCAATGTT +
Preference number: 4 (lower is better)
Translates to: PAGHPLRVYVEYTSELSCSWDRC*LSRANV
Trigger: AACATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGA...GCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp ATCGGTGTGCATGGTAACTCTCTAGCAGTGTCCTTCATGCCGGGACATGGGGACGATGATTCCGGAAGGTaGTTATGTCTGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: IGVHGNSLAVSFMPGHGDDDSGR*LCLCSF
Trigger: GAAGGAGCACAGACATAAGCACCTTCCGGAATCATC...GTCCCCATGTCCCGGCATGAAGGACACTGCTAGAGAGTTACCATGCACACCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCACCTTGGTTCCAGGGGTaGCCACCTGGCCCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSPWFQG*PPGPGY
Trigger: ATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGG...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGCAGTGACTGGGACTCCATCCTaGTGGGCATCCTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LWAVIQETIGVHGNSLAVTGTPS*WASSES
Trigger: ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGT...CACTGCTAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCACAAGCCAGGACAGCCTaGCATCCTGGGACCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSQARTA*HPGTAA
Trigger: AGCAGCGGTCCCAGGATGCCAGGCTGTCCTGGCTTG...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAGCCTGCTGCTGGCTCTaGTGCACATGGAGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSACCWL*CTWSVL
Trigger: GAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGC...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCACTCAGGGCCTGCTGCTaGCTCTGGTGCACATGGAGC +
Preference number: 4 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSLRACC*LWCTWS
Trigger: GCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAG...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAGCCTCCCCAAGGTCCTaGTTTGAGGTCGGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSASPRS*FEVGGS
Trigger: ACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGC...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAATTGTCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGCGCACACTCAGGGTCTaGTCCAGCCTGCAGATGAAC +
Preference number: 4 (lower is better)
Translates to: ELSCSRTMKLRSCSLLTQRTLRV*SSLQMN
Trigger: GTTCATCTGCAGGCTGGACCAGACCCTGAGTGTGCG...CTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGACAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp TCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGGTTGCTTGGTCAGAGGGAGATaGTTCCGGAAGGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: SCSRTMKLRSCSLLTQGCLVRGR*FRKVLM
Trigger: CATAAGCACCTTCCGGAATCATCTCCCTCTGACCAA...GCAACCCTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp ACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTGGGCAAATGTCAGGTaGCACAGAGTCAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: TREPLWAVIQETIGVHGNWANVR*HRVRDP
Trigger: AGGGTCTCTGACTCTGTGTCACCTGACATTTGCCCA...GTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp ACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACCTGAGCTCTGTTTCCTaGTCTGTCACAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: TREPLWAVIQETIGVHGNLSSVS*SVTAHF
Trigger: GAAGTGGGCTGTGACAGATCAGGAAACAGAGCTCAG...GTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000587427.6
CDS-3UTR TCA 90 bp CTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGCAGTGCTGAGCTCTGTTTCCTaGTCTGTCACAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: LWAVIQETIGVHGNSLAVLSSVS*SVTAHF
Trigger: GAAGTGGGCTGTGACAGATCAGGAAACAGAGCTCAG...CACTGCTAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000587427.6
CDS-3UTR GCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCATCCTGGGACCGCTGCTaGCTGAGCAGGGCCAATGTT +
Preference number: 4 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSSWDRC*LSRANV
Trigger: AACATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGA...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAATGAATCCAGCCTCCGCCGCTaGCAGGTGGCTGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: SESLCRIHFRIVLLKDNESSLRR*QVAAQT
Trigger: GGTCTGGGCAGCCACCTGGCAGCGGCGGAGGCTGGA...TTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GTTTCCTCATTAGTATGGAACAGTGAACCCAGATGGTCTCCGGAGTTGCTTCCTGAAGTGGTTTGTGGGTaGTGGCCTAGGATGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VSSLVWNSEPRWSPELLPEVVCG*WPRMCH
Trigger: GTGGCACATCCTAGGCCAGCACCCACAAACCACTTC...AGGAAGCAACTCCGGAGACCATCTGGGTTCACTGTTCCATACTAATGAGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CCA 90 bp CAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTGGTGCCTTCCTTGACTaGGAGCAGCTCGATAAAGGG +
Preference number: 4 (lower is better)
Translates to: QLGLHPAGHPLRVYVEYTGAFLD*EQLDKG
Trigger: CCCTTTATCGAGCTGCTCCCAGTCAAGGAAGGCACC...AGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAGAGGCAGCTTCCTCCTaGGTGCCTTCCTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: AGHPLRVYVEYTSELSCSEAASS*VPSLTG
Trigger: CCCAGTCAAGGAAGGCACCCAGGAGGAAGCTGCCTC...TGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp CTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGCAGTGTTGGTCAGAGGGAGATaGTTCCGGAAGGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: LWAVIQETIGVHGNSLAVLVRGR*FRKVLM
Trigger: CATAAGCACCTTCCGGAATCATCTCCCTCTGACCAA...CACTGCTAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp CAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTGGGCAAATGTCAGGTaGCACAGAGTCAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: QLGLHPAGHPLRVYVEYTWANVR*HRVRDP
Trigger: AGGGTCTCTGACTCTGTGTCACCTGACATTTGCCCA...AGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTACCGCAGAGGAATCTGTaGATAGACCCCATGTGCACA +
Preference number: 4 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLPQRNL*IDPMCT
Trigger: TGTGCACATGGGGTCTATTCACAGATTCCTCTGCGG...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414034.7
ENST00000428494.6
CDS-3UTR GCA 90 bp GTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAATGAAGCTGAGGGCATCCTGGGACCGCTaGTGCCTGAGCAGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: VYVEYTSELSCSRTMKLRASWDR*CLSRAN
Trigger: ATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGATGC...CCTCAGCTTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp GTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAATGAAGCTGAGGCACCACCTCAGGGCCTaGTGCTGGCTCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: VYVEYTSELSCSRTMKLRHHLRA*CWLWCT
Trigger: TGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTGGTG...CCTCAGCTTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAGTCGGGGGCAGTGGCTaGTCTCCACTGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: HPLRVYVEYTSELSCSRTVGGSG*SPLSSC
Trigger: GCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGAC...TGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAATGAAGCTGAGGGCCTCCCCAAGGTCCTaGTTTGAGGTCGGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VYVEYTSELSCSRTMKLRASPRS*FEVGGS
Trigger: ACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGC...CCTCAGCTTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GAAGTAATAGCTCTCCCTTCCCCACCGCAGAAGTGGTTTGTGGGTGCTGGCCTAGTTTCCTCATTAGTATaGAACAGTGAACCCAGATGG +
Preference number: 4 (lower is better)
Translates to: EVIALPSPPQKWFVGAGLVSSLV*NSEPRW
Trigger: CCATCTGGGTTCACTGTTCCATACTAATGAGGAAAC...TAGGCCAGCACCCACAAACCACTTCTGCGGTGGGGAAGGGAGAGCTATTACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR TCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTATTTAGTGGGCTGCACTaGGCTCTGTTTCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLFSGLH*ALFPDL
Trigger: CAGATCAGGAAACAGAGCTCAGTGCAGCCCACTAAA...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR TCA 90 bp GAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTATTGGTCAGAGGGAGATaGTTCCGGAAGGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: EPLWAVIQETIGVHGNSLLVRGR*FRKVLM
Trigger: CATAAGCACCTTCCGGAATCATCTCCCTCTGACCAA...TAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAATGAAACATGGAGCGTGCTCTaGTCCAGCCTCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SESLCRIHFRIVLLKDNETWSVL*SSLRRC
Trigger: GCAGCGGCGGAGGCTGGAGCAGAGCACGCTCCATGT...TTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAGAGCAGGGCCAATGTTaGCAGCAGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HPLRVYVEYTSELSCSRTEQGQC*QQQQQQ
Trigger: CTGCTGCTGCTGCTGCTGCCAACATTGGCCCTGCTC...TGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp CATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACACCAAGATCGTGCCACTaGACCCCAGCTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: HPLRVYVEYTSELSCSRTPRSCH*TPAWAT
Trigger: TGTTGCCCAAGCTGGGGTGCAGTGGCACGATCTTGG...TGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301671.12
CDS-3UTR GCA 90 bp GAATTGTCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGGATGATTCCGGAAGGTaGTTATGTCTGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ELSCSRTMKLRSCSLLTQDDSGR*LCLCSF
Trigger: GAAGGAGCACAGACATAAGCACCTTCCGGAATCATC...CTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGACAATTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp GTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAATGAAGCTGAGGCGCACACTCAGGGTCTaGTCCAGCCTGCAGATGAAC +
Preference number: 4 (lower is better)
Translates to: VYVEYTSELSCSRTMKLRRTLRV*SSLQMN
Trigger: GTTCATCTGCAGGCTGGACCAGACCCTGAGTGTGCG...CCTCAGCTTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp CCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCATGGCTTTAAAAGGCTaGGCCCCAACTGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: PAGHPLRVYVEYTSELSCMALKG*APTGKS
Trigger: GGATTTCCCAGTTGGGGCCCAGCCTTTTAAAGCCAT...GCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428494.6
CDS-3UTR GCA 90 bp TCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAATGAAGTCACAGCCCACTTCTaGCTACTCCTGGCACGTGAC +
Preference number: 4 (lower is better)
Translates to: SESLCRIHFRIVLLKDNEVTAHF*LLLARD
Trigger: GTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGAC...TTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CCA 90 bp TCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAATGAAAAGAAGGCTAGTCCTTaGCACCACAAGGCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: SESLCRIHFRIVLLKDNEKKASP*HHKAPR
Trigger: CCTCGGGGCCTTGTGGTGCCAAGGACTAGCCTTCTT...TTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR GCA 90 bp TCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAATGAAACTGGGACTCCATCCTaGTGGGCATCCTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SESLCRIHFRIVLLKDNETGTPS*WASSES
Trigger: ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGT...TTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR TCA 90 bp TCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAATGAATTGGTCAGAGGGAGATaGTTCCGGAAGGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: SESLCRIHFRIVLLKDNELVRGR*FRKVLM
Trigger: CATAAGCACCTTCCGGAATCATCTCCCTCTGACCAA...TTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS GCA 90 bp CACCTCAGGGCCTGCTGCTGGCTCTGGTGCACATGGAGCGTGCTCTaGTCCAGCCTCCGCCGCTGCCAGGTGGCTGCCCAGACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: HLRACCWLWCTWSVL*SSLRRCQVAAQTRA
Trigger: GGCCCTGGTCTGGGCAGCCACCTGGCAGCGGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588352.5
ENST00000588762.5
ENST00000590249.5
ENST00000590520.5
ENST00000593209.5
CDS GCA 90 bp GACAGCCGTCCCAGCCTCCAGTGCCCTCAGCCCTGGGGACCTCAGTaGGTCCAGCAGCAGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: DSRPSLQCPQPWGPQ*VQQQGPRVLGSRGA
Trigger: GGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCTGGACGCACTGAGGTCCCCAGGGCTGAGGGCACTGGAGGCTGGGACGGCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
ENST00000593209.5
CDS-3UTR CAA 90 bp AGCAGCAGGGCCCTAGGGTCCTTGGTTCCAGGGGTGCCCACCTGGCCCAGGGTAAGGGCCCTAGGGTCCTaGGTTCCAGGGGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: SSRALGSLVPGVPTWPRVRALGS*VPGVPT
Trigger: GGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCT...TACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588762.5
CDS GCA 90 bp TGGGCTCCCTGTAGACACCACCTCAGGGCCTGCTGCTGGCTCTGGTaGACATGGAGCGTGCTCTGCTCCAGCCTCCGCCGCTGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: WAPCRHHLRACCWLW*TWSVLCSSLRRCQV
Trigger: CACCTGGCAGCGGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTGGTGTCTACAGGGAGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588352.5
ENST00000588762.5
ENST00000590249.5
ENST00000590520.5
ENST00000593209.5
CDS CCA 90 bp GCCACTCGGTGCTGGAGGCCAGCAAGCCAGGACAGCCTGGCATCCTaGGACCGCTGCTGCCTGAGCAGGGCCAATGTTGGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ATRCWRPASQDSLAS*DRCCLSRANVGSSS
Trigger: GCTGCTGCTGCCAACATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGATGCCAGGCTGTCCTGGCTTGCTGGCCTCCAGCACCGAGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588352.5
ENST00000588762.5
ENST00000590249.5
ENST00000590520.5
ENST00000593209.5
CDS CCA 90 bp GGGTCTGGCTGGCCTGTGCTCCTTCTGAGGGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCACCTCAGGGCCTGCTGCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GSGWPVLLLREQWGR*APCRHHLRACCWLW
Trigger: CCAGAGCCAGCAGCAGGCCCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGGCCAGCCAGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586692.5
CDS-3UTR CAA 90 bp GACACAGAGTCAGAGACCCTGGCCAAGGACTCCCCATCCGGAGAGGTCCCAGAGCCATGGTCCAGCAGCTaGGCCCCCGCCCACTGCCCC +
Preference number: 5 (lower is better)
Translates to: DTESETLAKDSPSGEVPEPWSSS*APAHCP
Trigger: GGGGCAGTGGGCGGGGGCCAAGCTGCTGGACCATGG...CTCTGGGACCTCTCCGGATGGGGAGTCCTTGGCCAGGGTCTCTGACTCTGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp GTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATCCATGGTCCAGCAGCTaGGCCCCCGCCCACTGCCCC +
Preference number: 5 (lower is better)
Translates to: VGAGLGCATSPPRLLCAHPWSSS*APAHCP
Trigger: GGGGCAGTGGGCGGGGGCCAAGCTGCTGGACCATGG...ATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS GCA 90 bp GTGAGGCTGGCGCGGTCCGTCAGCACCAGCTCATACTCCTTGCCCTaGTGGGCCTCGGCCAAAAGGAGGGTGGAGGCAGCTTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: VRLARSVSTSSYSLP*WASAKRRVEAASSW
Trigger: CCAGGAGGAAGCTGCCTCCACCCTCCTTTTGGCCGAGGCCCAGCAGGGCAAGGAGTATGAGCTGGTGCTGACGGACCGCGCCAGCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
ENST00000593209.5
CDS-3UTR CAA 90 bp AGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGCCATGGTCCAGCAGCTaGGCCCCCGCCCACTGCCCC +
Preference number: 5 (lower is better)
Translates to: SGLLLRATGTPSCWASSEPWSSS*APAHCP
Trigger: GGGGCAGTGGGCGGGGGCCAAGCTGCTGGACCATGG...CTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS CCA 90 bp CAGCCTGGCATCCTGGGACCGCTGCTGCCTGAGCAGGGCCAATGTTaGCAGCAGCAGCAGCAGCAGCAGCAGTGGCCACAGCAGCATCTC +
Preference number: 5 (lower is better)
Translates to: QPGILGPLLPEQGQC*QQQQQQQQWPQQHL
Trigger: GAGATGCTGCTGTGGCCACTGCTGCTGCTGCTGCTGCTGCTGCCAACATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGATGCCAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588352.5
ENST00000588762.5
ENST00000590249.5
ENST00000590520.5
ENST00000593209.5
CDS CCA 90 bp GCTCCTGTGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTaGGGGAAAGTCCTGGAGCTCAGTGGGGGAATGGCTGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: APVCACSLARPRAEC*GKVLELSGGMAGPG
Trigger: CCCCGGCCCAGCCATTCCCCCACTGAGCTCCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACACAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS CCA 90 bp CCCCAGACCCTGGGAAACACACCTGTGCTCCTTCTGAGGGAACAGTaGGGGCGCTGGGCTCCCTGTAGACACCACCTCAGGGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PQTLGNTPVLLLREQ*GRWAPCRHHLRACC
Trigger: GCAGCAGGCCCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGGTGTGTTTCCCAGGGTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585375.1
CDS-3UTR CAA 90 bp TGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCCCCCAAGGTCCTGGTTaGAGGTCGGGGGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: WGHGQALLASANPGGPYFPQGPG*RSGAVA
Trigger: AGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGG...GAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp GGGCAGGCACTGCTGGCATCTGCTAACCCCGGAGGCCCATACTTCAGAACCGGTAGGGCCCTAGGGTCCTaGGTTCCAGGGGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: GQALLASANPGGPYFRTGRALGS*VPGVPT
Trigger: GGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCT...ACCGGTTCTGAAGTATGGGCCTCCGGGGTTAGCAGATGCCAGCAGTGCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp GTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATAGGGCCCTAGGGTCCTaGGTTCCAGGGGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: VGAGLGCATSPPRLLCAHRALGS*VPGVPT
Trigger: GGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCT...ATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS GCA 90 bp CACACAGCCATGGTCCAGCAGCTTGGCCCCCGCCCACTGCCCCACTaGCCGGCCCAGGGCCTCAGAGAACAGGTCTTCACCAATATCTTC +
Preference number: 5 (lower is better)
Translates to: HTAMVQQLGPRPLPH*PAQGLREQVFTNIF
Trigger: GAAGATATTGGTGAAGACCTGTTCTCTGAGGCCCTGGGCCGGGCAGTGGGGCAGTGGGCGGGGGCCAAGCTGCTGGACCATGGCTGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000585735.1
ENST00000587427.6
ENST00000593209.5
CDS CCA 90 bp CTGGGAAACACACCTGTGCTCCTTCTGAGGGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCACCTCAGGGCCTGCTGCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LGNTPVLLLREQWGR*APCRHHLRACCWLW
Trigger: CCAGAGCCAGCAGCAGGCCCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGGTGTGTTTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585375.1
CDS-3UTR CAA 90 bp GGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTAGGGCCCTAGGGTCCTaGGTTCCAGGGGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: GLLLRATGTPSCWASSESRALGS*VPGVPT
Trigger: GGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCT...ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS TCA 90 bp CCCACATGCACCTGTCACAGCCCACTTCTGCCTACTCCTGGCACGTaGCGGAGACCCCTGGGTGACTCTGGGTCTCAGCACACATCCGGC +
Preference number: 5 (lower is better)
Translates to: PTCTCHSPLLPTPGT*RRPLGDSGSQHTSG
Trigger: GCCGGATGTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGACAGGTGCATGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428494.6
CDS TCA 90 bp CCAAGCAGCTCCTGTCACAGCCCACTTCTGCCTACTCCTGGCACGTaGCGGAGACCCCTGGGTGACTCTGGGTCTCAGCACACATCCGGC +
Preference number: 5 (lower is better)
Translates to: PSSSCHSPLLPTPGT*RRPLGDSGSQHTSG
Trigger: GCCGGATGTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGACAGGAGCTGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590249.5
CDS GCA 90 bp AGGCTGTGGGGTCCATGCCCACATGCACCTGTCACAGCCCACTTCTaGCTACTCCTGGCACGTGACGGAGACCCCTGGGTGACTCTGGGT +
Preference number: 5 (lower is better)
Translates to: RLWGPCPHAPVTAHF*LLLARDGDPWVTLG
Trigger: ACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGACAGGTGCATGTGGGCATGGACCCCACAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428494.6
CDS-3UTR CAA 90 bp GAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCTGCGAGGGCCCTAGGGTCCTaGGTTCCAGGGGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: EGRESPRRKYMNEWVTAARALGS*VPGVPT
Trigger: GGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCT...CGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS TCA 90 bp GCAGCAGCAGCAGCAGTGGCCACAGCAGCATCTCCAAGCAGCTCCTaGGTGCAGATCCTGCCTCTGCCGCTTGTTAGCTGTAGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: AAAAAVATAASPSSS*VQILPLPLVSCRAL
Trigger: CAGGGCCCTACAGCTAACAAGCGGCAGAGGCAGGATCTGCACTCAGGAGCTGCTTGGAGATGCTGCTGTGGCCACTGCTGCTGCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588352.5
ENST00000588762.5
ENST00000590520.5
ENST00000593209.5
CDS CCA 90 bp AAGGTGCTTATGTCTGTGCTCCTTCTGAGGGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCACCTCAGGGCCTGCTGCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: KVLMSVLLLREQWGR*APCRHHLRACCWLW
Trigger: CCAGAGCCAGCAGCAGGCCCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGACATAAGCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
ENST00000588352.5
ENST00000590249.5
ENST00000593209.5
CDS-3UTR CAA 90 bp TGGGTGCAAGAGGTTTATTTGGGAGCCATCCCAGGAAGCCCAAGGCGGGGGAGTCCCCAAGGTCCTGGTTaGAGGTCGGGGGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: WVQEVYLGAIPGSPRRGSPQGPG*RSGAVA
Trigger: AGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGG...ACTCCCCCGCCTTGGGCTTCCTGGGATGGCTCCCAAATAAACCTCTTGCACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000587427.6
CDS-3UTR CAA 90 bp AAGTACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGCCATGGTCCAGCAGCTaGGCCCCCGCCCACTGCCCC +
Preference number: 5 (lower is better)
Translates to: KYMNEWVTAAGNWDSILLPWSSS*APAHCP
Trigger: GGGGCAGTGGGCGGGGGCCAAGCTGCTGGACCATGG...CAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS TCA 90 bp CAGCCCACTTCTGCCTACTCCTGGCACGTGACGGAGACCCCTGGGTaGCTCTGGGTCTCAGCACACATCCGGCCAGAAAGAAGGAGCGAT +
Preference number: 5 (lower is better)
Translates to: QPTSAYSWHVTETPG*LWVSAHIRPERRSD
Trigger: ATCGCTCCTTCTTTCTGGCCGGATGTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000590249.5
CDS CCA 90 bp GTCACAGCCCACTTCTGCCTACTCCTGGCACGTGACGGAGACCCCTaGGTGACTCTGGGTCTCAGCACACATCCGGCCAGAAAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: VTAHFCLLLARDGDP*VTLGLSTHPARKKE
Trigger: CTCCTTCTTTCTGGCCGGATGTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000590249.5
CDS-3UTR CAA 90 bp TCCTTCATGCCGGGACATGGGGACACGGGCAGGCACTGCTGGCATCTGCTAACCTCCTGGGTGCCTTCCTaGACTGGGAGCAGCTCGATA +
Preference number: 5 (lower is better)
Translates to: SFMPGHGDTGRHCWHLLTSWVPS*TGSSSI
Trigger: TATCGAGCTGCTCCCAGTCAAGGAAGGCACCCAGGA...GGTTAGCAGATGCCAGCAGTGCCTGCCCGTGTCCCCATGTCCCGGCATGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp TGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGCAGCTCCTGGGTGCCTTCCTaGACTGGGAGCAGCTCGATA +
Preference number: 5 (lower is better)
Translates to: CWPRMCHESSKAPVCACSSWVPS*TGSSSI
Trigger: TATCGAGCTGCTCCCAGTCAAGGAAGGCACCCAGGA...GCTGCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS-3UTR CAA 90 bp TGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGGAGATGGTCTCCGGAGTaGCTTCCTGCGGCGATGCCT +
Preference number: 5 (lower is better)
Translates to: CAHAALPGPEQNVGGKSWRWSPE*LPAAMP
Trigger: AGGCATCGCCGCAGGAAGCAACTCCGGAGACCATCT...CCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS TCA 90 bp TGTTTCCTGATCTGTCACAGCCCACTTCTGCCTACTCCTGGCACGTaGCGGAGACCCCTGGGTGACTCTGGGTCTCAGCACACATCCGGC +
Preference number: 5 (lower is better)
Translates to: CFLICHSPLLPTPGT*RRPLGDSGSQHTSG
Trigger: GCCGGATGTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGACAGATCAGGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414034.7
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588762.5
CDS-3UTR CAA 90 bp TACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATCCCCAAGGTCCTGGTTaGAGGTCGGGGGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: YCCGQLGLHPAGHPLRVYPQGPG*RSGAVA
Trigger: AGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGG...ATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp GGCCCATACTTCAGAACCGGTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGAGGCAGTGGTCCAGCTaGTCTCGATTTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GPYFRTGQLGQGLSKAQRRQWSS*SRFSSD
Trigger: GTCAGAGGAAAATCGAGACAAGCTGGACCACTGCCT...CCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGACCGGTTCTGAAGTATGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp TACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATGCGGTGGGGCAGGACTaGACTCAGGACACCACCCTC +
Preference number: 5 (lower is better)
Translates to: YCCGQLGLHPAGHPLRVYAVGQD*TQDTTL
Trigger: GAGGGTGGTGTCCTGAGTCAAGTCCTGCCCCACCGC...ATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp GTTTGTGGGTGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCCCAGAGCAGAATGTaGGGGGAAAGTCCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: VCGCWPRMCHESSKAPVCAQSRM*GESPGA
Trigger: AGCTCCAGGACTTTCCCCCAACATTCTGCTCTGGGC...GCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCACCCACAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS CCA 90 bp GGAGGAGGTAAGGGGGCCATCAGGCTCTGGAATCTGACGGTCCTGTaGGGTTTCTTTCTCTTTGGGTCACCTCCCCAGACCCTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: GGGKGAIRLWNLTVL*GFFLFGSPPQTLGN
Trigger: GTTTCCCAGGGTCTGGGGAGGTGACCCAAAGAGAAAGAAACCCCACAGGACCGTCAGATTCCAGAGCCTGATGGCCCCCTTACCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585375.1
CDS CCA 90 bp GGCCACTCCGTTGGCAGTGGAGGAGGTAAGGGGGCCATCAGGCTCTaGAATCTGACGGTCCTGTGGGGTTTCTTTCTCTTTGGGTCACCT +
Preference number: 5 (lower is better)
Translates to: GHSVGSGGGKGAIRL*NLTVLWGFFLFGSP
Trigger: AGGTGACCCAAAGAGAAAGAAACCCCACAGGACCGTCAGATTCCAGAGCCTGATGGCCCCCTTACCTCCTCCACTGCCAACGGAGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585375.1
CDS-3UTR CAA 90 bp AAGTACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGCCCCAAGGTCCTGGTTaGAGGTCGGGGGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: KYMNEWVTAAGNWDSILLPQGPG*RSGAVA
Trigger: AGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGG...CAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp GAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTGCTGCGTCCTGGGTGCCTTCCTaGACTGGGAGCAGCTCGATA +
Preference number: 5 (lower is better)
Translates to: EGRESPRRKYMNEWVTAASWVPS*TGSSSI
Trigger: TATCGAGCTGCTCCCAGTCAAGGAAGGCACCCAGGA...CGCAGCAGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp CAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTCCATGGTCCAGCAGCTaGGCCCCCGCCCACTGCCCC +
Preference number: 5 (lower is better)
Translates to: QLGLHPAGHPLRVYVEYTPWSSS*APAHCP
Trigger: GGGGCAGTGGGCGGGGGCCAAGCTGCTGGACCATGG...AGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp AAGTACATGAATGAGTGGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGCGGTGGGGCAGGACTaGACTCAGGACACCACCCTC +
Preference number: 5 (lower is better)
Translates to: KYMNEWVTAAGNWDSILLAVGQD*TQDTTL
Trigger: GAGGGTGGTGTCCTGAGTCAAGTCCTGCCCCACCGC...CAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCCACTCATTCATGTACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp GTCAGCTGGGCCAAGGCCTCTCTAAGGCCCAGCGGCTCTCATGGGCAAATGTCAAGGTCCTGCTCCTTATaGACTCAGGGTTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VSWAKASLRPSGSHGQMSRSCSL*TQGCCS
Trigger: GGAGCAGCAACCCTGAGTCAATAAGGAGCAGGACCT...TGACATTTGCCCATGAGAGCCGCTGGGCCTTAGAGAGGCCTTGGCCCAGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS TCA 90 bp AATTTAGTGGGCTGCACTGAGCTCTGTTTCCTGATTCCTGGCACGTaGCGGAGACCCCTGGGTGACTCTGGGTCTCAGCACACATCCGGC +
Preference number: 5 (lower is better)
Translates to: NLVGCTELCFLIPGT*RRPLGDSGSQHTSG
Trigger: GCCGGATGTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAATCAGGAAACAGAGCTCAGTGCAGCCCACTAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588352.5
CDS-3UTR CAA 90 bp ACCAGAGAACCTCTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACAGGGCCCTAGGGTCCTaGGTTCCAGGGGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: TREPLWAVIQETIGVHGNRALGS*VPGVPT
Trigger: GGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCT...GTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp GGGTTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTAGGCAGTGGTCCAGCTaGTCTCGATTTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GLLLRATGTPSCWASSESRQWSS*SRFSSD
Trigger: GTCAGAGGAAAATCGAGACAAGCTGGACCACTGCCT...ACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS TCA 90 bp CCACTGTCTTCCTGCTGGGTCTGGCTGGCCTTGGTCAGAGGGAGATaGTTCCGGAAGGTGCTTATGTCTGTGCTCCTTCTGAGGGAACAG +
Preference number: 5 (lower is better)
Translates to: PLSSCWVWLALVRGR*FRKVLMSVLLLREQ
Trigger: CTGTTCCCTCAGAAGGAGCACAGACATAAGCACCTTCCGGAATCATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGGAAGACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
ENST00000588352.5
ENST00000590249.5
ENST00000593209.5
CDS TCA 90 bp TTCCCATCAGCCCTGATCTCCATGGCACCCTGGGAGTGTGCAGAGTaGAGGGGTCTACAGTCAGACCCTGTCCTCGTCTCCTTTACCTTG +
Preference number: 5 (lower is better)
Translates to: FPSALISMAPWECAE*RGLQSDPVLVSFTL
Trigger: CAAGGTAAAGGAGACGAGGACAGGGTCTGACTGTAGACCCCTTCACTCTGCACACTCCCAGGGTGCCATGGAGATCAGGGCTGATGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585735.1
CDS CCA 90 bp GCGTGTGTGGCTGTGCCCAGGCTACATGTGTTTAGAAGTTTTGTGTaGACAGGTGTGTGTCTGTGGGACTTAGCCCTCCCCTCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: ACVAVPRLHVFRSFV*TGVCLWDLALPSQS
Trigger: GCTCTGGGAGGGGAGGGCTAAGTCCCACAGACACACACCTGTCCACACAAAACTTCTAAACACATGTAGCCTGGGCACAGCCACACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585735.1
CDS-3UTR CAA 90 bp GGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTAGATGGGAGGATCCCTaGAGCCCAGGATGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: GREGRESPRRKYMNEWVTRWEDP*SPGCQG
Trigger: GCCTTGACATCCTGGGCTCAAGGGATCCTCCCATCT...AGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301671.12
CDS-3UTR CAA 90 bp CTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGCAGTGGCGGTGGGGCAGGACTaGACTCAGGACACCACCCTC +
Preference number: 5 (lower is better)
Translates to: LWAVIQETIGVHGNSLAVAVGQD*TQDTTL
Trigger: GAGGGTGGTGTCCTGAGTCAAGTCCTGCCCCACCGC...CACTGCTAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp TGCTGGCCTAGGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGCAGCCCTGAGGCAAGAATCTaGTCTCGATTTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: CWPRMCHESSKAPVCACSPEARI*SRFSSD
Trigger: GTCAGAGGAAAATCGAGACAAGATTCTTGCCTCAGG...GCTGCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCCTAGGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS TCA 90 bp CCACAAACACCTCGTAGTGGGGAGCAGAGCCCGCAGAGGAATCTGTaGATAGACCCCATGTGCACACATACTTCCGGTGAATGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: PQTPRSGEQSPQRNL*IDPMCTHTSGEWAA
Trigger: AGCTGCCCATTCACCGGAAGTATGTGTGCACATGGGGTCTATTCACAGATTCCTCTGCGGGCTCTGCTCCCCACTACGAGGTGTTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000585735.1
CDS GCA 90 bp CCTCTGCCGCTTGTTAGCTGTAGGGCCCTGAGCAATTTAGTGGGCTaGACTGAGCTCTGTTTCCTGATCTGTCACAGCCCACTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: PLPLVSCRALSNLVG*TELCFLICHSPLLP
Trigger: AGGCAGAAGTGGGCTGTGACAGATCAGGAAACAGAGCTCAGTGCAGCCCACTAAATTGCTCAGGGCCCTACAGCTAACAAGCGGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414034.7
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588762.5
ENST00000593209.5
CDS GCA 90 bp CCTCTGCCGCTTGTTAGCTGTAGGGCCCTGAGCAATTTAGTGGGCTaGACTGAGCTCTGTTTCCTGATAGGAAGGGTTTCGGACAGGGTC +
Preference number: 5 (lower is better)
Translates to: PLPLVSCRALSNLVG*TELCFLIGRVSDRV
Trigger: GACCCTGTCCGAAACCCTTCCTATCAGGAAACAGAGCTCAGTGCAGCCCACTAAATTGCTCAGGGCCCTACAGCTAACAAGCGGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590520.5
CDS-3UTR CAA 90 bp GGAAGAGAGGGAAGGGAGAGCCCCCGCAGGAAGTACATGAATGAGTGGGTTACTAGGTCCTGCTCCTTATaGACTCAGGGTTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GREGRESPRRKYMNEWVTRSCSL*TQGCCS
Trigger: GGAGCAGCAACCCTGAGTCAATAAGGAGCAGGACCT...AGTAACCCACTCATTCATGTACTTCCTGCGGGGGCTCTCCCTTCCCTCTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS TCA 90 bp GTCAGACCCTGTCCTCGTCTCCTTTACCTTGTCTCGATTTTCCTCTaGCAGATTCCTCAGCCCCCTCAGCGCCACAAACACCTCGTAGTG +
Preference number: 5 (lower is better)
Translates to: VRPCPRLLYLVSIFL*QIPQPPQRHKHLVV
Trigger: CACTACGAGGTGTTTGTGGCGCTGAGGGGGCTGAGGAATCTGTCAGAGGAAAATCGAGACAAGGTAAAGGAGACGAGGACAGGGTCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585735.1
CDS-3UTR CAA 90 bp TTACTGCTGCGGGCAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTAAGGCAGTGGTCCAGCTaGTCTCGATTTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LLLRATGTPSCWASSESLRQWSS*SRFSSD
Trigger: GTCAGAGGAAAATCGAGACAAGCTGGACCACTGCCT...TAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTGCCCGCAGCAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS TCA 90 bp CCACTGTCTTCCTGCTGGGTCTGGCTGGCCTTGGTCAGAGGGAGATaGTTCCGGAAGGTGCTTATGTCTATAGCCCCAATGACAACAGAA +
Preference number: 5 (lower is better)
Translates to: PLSSCWVWLALVRGR*FRKVLMSIAPMTTE
Trigger: TTCTGTTGTCATTGGGGCTATAGACATAAGCACCTTCCGGAATCATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGGAAGACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588762.5
ENST00000590520.5
CDS-3UTR CAA 90 bp GAATTGTCCTGCTCAAGGACAATGAAGCTGAGGTCCTGCTCCTTATTGACTCAGTCCTGGGTGCCTTCCTaGACTGGGAGCAGCTCGATA +
Preference number: 5 (lower is better)
Translates to: ELSCSRTMKLRSCSLLTQSWVPS*TGSSSI
Trigger: TATCGAGCTGCTCCCAGTCAAGGAAGGCACCCAGGA...CTGAGTCAATAAGGAGCAGGACCTCAGCTTCATTGTCCTTGAGCAGGACAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp CAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTTCCTGGGTGCCTTCCTaGACTGGGAGCAGCTCGATA +
Preference number: 5 (lower is better)
Translates to: QLGLHPAGHPLRVYVEYTSWVPS*TGSSSI
Trigger: TATCGAGCTGCTCCCAGTCAAGGAAGGCACCCAGGA...AGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp CTTTGGGCTGTGATACAGGAAACCATCGGTGTGCATGGTAACTCTCTAGCAGTGAGGTCCTGCTCCTTATaGACTCAGGGTTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LWAVIQETIGVHGNSLAVRSCSL*TQGCCS
Trigger: GGAGCAGCAACCCTGAGTCAATAAGGAGCAGGACCT...CACTGCTAGAGAGTTACCATGCACACCGATGGTTTCCTGTATCACAGCCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp CAACTGGGACTCCATCCTGCTGGGCATCCTCTGAGAGTTTATGTAGAATACACTAGGTCCTGCTCCTTATaGACTCAGGGTTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QLGLHPAGHPLRVYVEYTRSCSL*TQGCCS
Trigger: GGAGCAGCAACCCTGAGTCAATAAGGAGCAGGACCT...AGTGTATTCTACATAAACTCTCAGAGGATGCCCAGCAGGATGGAGTCCCAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp TCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAATGAAGCGGTGGGGCAGGACTaGACTCAGGACACCACCCTC +
Preference number: 5 (lower is better)
Translates to: SESLCRIHFRIVLLKDNEAVGQD*TQDTTL
Trigger: GAGGGTGGTGTCCTGAGTCAAGTCCTGCCCCACCGC...TTCATTGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS-3UTR CAA 90 bp CATCCTCTGAGAGTTTATGTAGAATACACTTCAGAATTGTCCTGCTCAAGGACAAGGCAGTGGTCCAGCTaGTCTCGATTTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: HPLRVYVEYTSELSCSRTRQWSS*SRFSSD
Trigger: GTCAGAGGAAAATCGAGACAAGCTGGACCACTGCCT...TGTCCTTGAGCAGGACAATTCTGAAGTGTATTCTACATAAACTCTCAGAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
CDS GCA 72 bp GCCTGCTGCTGGCTCTGGTGCACATGGAGCGTGCTCTaGTCCAGCCTCCGCCGCTGCCAGGTGGCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: ACCWLWCTWSVL*SSLRRCQVAAQ
Trigger: CTGGGCAGCCACCTGGCAGCGGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588352.5
ENST00000588762.5
ENST00000590249.5
ENST00000590520.5
ENST00000593209.5
CDS GCA 72 bp ATGGTCCAGCAGCTTGGCCCCCGCCCACTGCCCCACTaGCCGGCCCAGGGCCTCAGAGAACAGGTCTTCACC +
Preference number: 6 (lower is better)
Translates to: MVQQLGPRPLPH*PAQGLREQVFT
Trigger: GGTGAAGACCTGTTCTCTGAGGCCCTGGGCCGGGCAGTGGGGCAGTGGGCGGGGGCCAAGCTGCTGGACCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000585735.1
ENST00000587427.6
ENST00000593209.5
CDS GCA 72 bp GGCTGGCGCGGTCCGTCAGCACCAGCTCATACTCCTTaGCCTGCTGGGCCTCGGCCAAAAGGAGGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: GWRGPSAPAHTP*PAGPRPKGGWR
Trigger: CCTCCACCCTCCTTTTGGCCGAGGCCCAGCAGGGCAAGGAGTATGAGCTGGTGCTGACGGACCGCGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
ENST00000593209.5
CDS CCA 72 bp GCCTCCTGCATCCAGAGTCACCACCACCTGCAGCTTTaGCCAGAGCCGAAGGGCCAGTCCCCGTGGCCCCTG +
Preference number: 6 (lower is better)
Translates to: ASCIQSHHHLQL*PEPKGQSPWPL
Trigger: CAGGGGCCACGGGGACTGGCCCTTCGGCTCTGGCCAAAGCTGCAGGTGGTGGTGACTCTGGATGCAGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
ENST00000593209.5
CDS GCA 72 bp TGTAGACACCACCTCAGGGCCTGCTGCTGGCTCTGGTaGACATGGAGCGTGCTCTGCTCCAGCCTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: CRHHLRACCWLW*TWSVLCSSLRR
Trigger: GCGGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTGGTGTCTACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588352.5
ENST00000588762.5
ENST00000590249.5
ENST00000590520.5
ENST00000593209.5
CDS GCA 72 bp GCGCGGTCCGTCAGCACCAGCTCATACTCCTTGCCCTaGTGGGCCTCGGCCAAAAGGAGGGTGGAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: ARSVSTSSYSLP*WASAKRRVEAA
Trigger: AGCTGCCTCCACCCTCCTTTTGGCCGAGGCCCAGCAGGGCAAGGAGTATGAGCTGGTGCTGACGGACCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
ENST00000593209.5
CDS CCA 72 bp CCCTGTAGACACCACCTCAGGGCCTGCTGCTGGCTCTaGTGCACATGGAGCGTGCTCTGCTCCAGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: PCRHHLRACCWL*CTWSVLCSSLR
Trigger: GCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTGGTGTCTACAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588352.5
ENST00000588762.5
ENST00000590249.5
ENST00000590520.5
ENST00000593209.5
CDS CCA 72 bp TGGCCTGTGCTCCTTCTGAGGGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCACCTCAGGGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: WPVLLLREQWGR*APCRHHLRACC
Trigger: GCAGCAGGCCCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586692.5
CDS CCA 72 bp GACCCTGTGCTCCTTCTGAGGGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCACCTCAGGGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: DPVLLLREQWGR*APCRHHLRACC
Trigger: GCAGCAGGCCCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588762.5
ENST00000590520.5
CDS CAA 90 bp GGCTCCTGTGTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTaGGGGGAAAGTCCTGGAGCTCAGTGGGGGAATGGCTGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: GSCVRMQPCQAQSRM*GESPGAQWGNGWAG
Trigger: CCCGGCCCAGCCATTCCCCCACTGAGCTCCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACACAGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS GCA 72 bp GAGGTCGGGGGCAGTGGCTGCTCTCCACTGTCTTCCTaGTGGGTCTGGCTGGCCTGTGCTCCTTCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: EVGGSGCSPLSS*WVWLACAPSEG
Trigger: TCCCTCAGAAGGAGCACAGGCCAGCCAGACCCAGCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586692.5
CDS CCA 72 bp ATCCTGGGACCGCTGCTGCCTGAGCAGGGCCAATGTTaGCAGCAGCAGCAGCAGCAGCAGCAGTGGCCACAG +
Preference number: 6 (lower is better)
Translates to: ILGPLLPEQGQC*QQQQQQQQWPQ
Trigger: CTGTGGCCACTGCTGCTGCTGCTGCTGCTGCTGCCAACATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588352.5
ENST00000588762.5
ENST00000590249.5
ENST00000590520.5
ENST00000593209.5
CDS CCA 72 bp ACACCTGTGCTCCTTCTGAGGGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCACCTCAGGGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: TPVLLLREQWGR*APCRHHLRACC
Trigger: GCAGCAGGCCCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGGTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585375.1
CDS GCA 72 bp AACATCCAGAAGTTCGACAGCCGTCCCAGCCTCCAGTaGCCTCAGCCCTGGGGACCTCAGTGCGTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: NIQKFDSRPSLQ*PQPWGPQCVQQ
Trigger: CTGCTGGACGCACTGAGGTCCCCAGGGCTGAGGGCACTGGAGGCTGGGACGGCTGTCGAACTTCTGGATGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
ENST00000593209.5
CDS GCA 72 bp GGTCCATGCCCACATGCACCTGTCACAGCCCACTTCTaGCTACTCCTGGCACGTGACGGAGACCCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: GPCPHAPVTAHF*LLLARDGDPWV
Trigger: CACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGACAGGTGCATGTGGGCATGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428494.6
CDS CCA 72 bp ATGTCTGTGCTCCTTCTGAGGGAACAGTGGGGGCGCTaGGCTCCCTGTAGACACCACCTCAGGGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: MSVLLLREQWGR*APCRHHLRACC
Trigger: GCAGCAGGCCCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
ENST00000588352.5
ENST00000590249.5
ENST00000593209.5
CDS TCA 72 bp ACCTGTCACAGCCCACTTCTGCCTACTCCTGGCACGTaGCGGAGACCCCTGGGTGACTCTGGGTCTCAGCAC +
Preference number: 6 (lower is better)
Translates to: TCHSPLLPTPGT*RRPLGDSGSQH
Trigger: GTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGACAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428494.6
CDS TCA 72 bp TCCTGTCACAGCCCACTTCTGCCTACTCCTGGCACGTaGCGGAGACCCCTGGGTGACTCTGGGTCTCAGCAC +
Preference number: 6 (lower is better)
Translates to: SCHSPLLPTPGT*RRPLGDSGSQH
Trigger: GTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590249.5
CDS GCA 72 bp CAGCATCTCCAAGCAGCTCCTGTCACAGCCCACTTCTaGCTACTCCTGGCACGTGACGGAGACCCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: QHLQAAPVTAHF*LLLARDGDPWV
Trigger: CACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGACAGGAGCTGCTTGGAGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590249.5
CDS CCA 72 bp CACTTCTGCCTACTCCTGGCACGTGACGGAGACCCCTaGGTGACTCTGGGTCTCAGCACACATCCGGCCAGA +
Preference number: 6 (lower is better)
Translates to: HFCLLLARDGDP*VTLGLSTHPAR
Trigger: TCTGGCCGGATGTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588762.5
ENST00000590249.5
CDS CCA 72 bp CTGGGAAACACACCTGTGCTCCTTCTGAGGGAACAGTaGGGGCGCTGGGCTCCCTGTAGACACCACCTCAGG +
Preference number: 6 (lower is better)
Translates to: LGNTPVLLLREQ*GRWAPCRHHLR
Trigger: CCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGGTGTGTTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585375.1
CDS CAA 72 bp GTGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTaGGGGGAAAGTCCTGGAGCTCAGTGGGGGAATGGC +
Preference number: 6 (lower is better)
Translates to: VRMQPCQAQSRM*GESPGAQWGNG
Trigger: GCCATTCCCCCACTGAGCTCCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS CAA 90 bp GGATGTGCCACGAGTCCTCCAAGGCTCCTGTGTGCGCATGCAGCCTaGCCAGGCCCAGAGCAGAATGTTGGGGGAAAGTCCTGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: GCATSPPRLLCAHAA*PGPEQNVGGKSWSS
Trigger: TGAGCTCCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCACACAGGAGCCTTGGAGGACTCGTGGCACATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS TCA 72 bp TCTGCCTACTCCTGGCACGTGACGGAGACCCCTGGGTaGCTCTGGGTCTCAGCACACATCCGGCCAGAAAGA +
Preference number: 6 (lower is better)
Translates to: SAYSWHVTETPG*LWVSAHIRPER
Trigger: TCTTTCTGGCCGGATGTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000590249.5
CDS TCA 72 bp ATCTGTCACAGCCCACTTCTGCCTACTCCTGGCACGTaGCGGAGACCCCTGGGTGACTCTGGGTCTCAGCAC +
Preference number: 6 (lower is better)
Translates to: ICHSPLLPTPGT*RRPLGDSGSQH
Trigger: GTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAGTAGGCAGAAGTGGGCTGTGACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414034.7
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588762.5
CDS TCA 72 bp GGCTGCACTGAGCTCTGTTTCCTGATTCCTGGCACGTaGCGGAGACCCCTGGGTGACTCTGGGTCTCAGCAC +
Preference number: 6 (lower is better)
Translates to: GCTELCFLIPGT*RRPLGDSGSQH
Trigger: GTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAATCAGGAAACAGAGCTCAGTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588352.5
CDS CCA 72 bp GCCTCGGCCAAAAGGAGGGTGGAGGCAGCTTCCTCCTaGGTGCCTTCCTTGACTGGGAGCAGCTCGATAAAG +
Preference number: 6 (lower is better)
Translates to: ASAKRRVEAASS*VPSLTGSSSIK
Trigger: CTTTATCGAGCTGCTCCCAGTCAAGGAAGGCACCCAGGAGGAAGCTGCCTCCACCCTCCTTTTGGCCGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
ENST00000593209.5
CDS CCA 72 bp TGCGCATGCAGCCTTGCCAGGCCCAGAGCAGAATGTTaGGGGAAAGTCCTGGAGCTCAGTGGGGGAATGGCT +
Preference number: 6 (lower is better)
Translates to: CACSLARPRAEC*GKVLELSGGMA
Trigger: AGCCATTCCCCCACTGAGCTCCAGGACTTTCCCCCAACATTCTGCTCTGGGCCTGGCAAGGCTGCATGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593209.5
CDS CCA 72 bp AAGGTGCTTATGTCTGTGCTCCTTCTGAGGGAACAGTaGGGGCGCTGGGCTCCCTGTAGACACCACCTCAGG +
Preference number: 6 (lower is better)
Translates to: KVLMSVLLLREQ*GRWAPCRHHLR
Trigger: CCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGACATAAGCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
ENST00000588352.5
ENST00000590249.5
ENST00000593209.5
CDS TCA 72 bp TTTCCTGATTCCTGGCACGTGACGGAGACCCCTGGGTaGCTCTGGGTCTCAGCACACATCCGGCCAGAAAGA +
Preference number: 6 (lower is better)
Translates to: FPDSWHVTETPG*LWVSAHIRPER
Trigger: TCTTTCTGGCCGGATGTGTGCTGAGACCCAGAGTCACCCAGGGGTCTCCGTCACGTGCCAGGAATCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588352.5
CDS CCA 72 bp CAGGGTCTGGTCCAGCCTGCAGATGAACCTGACGACTaGACACTGATTGTAGGCACCAACCACTCGCACCAC +
Preference number: 6 (lower is better)
Translates to: QGLVQPADEPDD*TLIVGTNHSHH
Trigger: GTGGTGCGAGTGGTTGGTGCCTACAATCAGTGTCCAGTCGTCAGGTTCATCTGCAGGCTGGACCAGACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000585735.1
ENST00000587427.6
ENST00000593209.5
CDS TCA 72 bp TCCTGCTGGGTCTGGCTGGCCTTGGTCAGAGGGAGATaGTTCCGGAAGGTGCTTATGTCTGTGCTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: SCWVWLALVRGR*FRKVLMSVLLL
Trigger: CAGAAGGAGCACAGACATAAGCACCTTCCGGAATCATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301671.12
ENST00000414034.7
ENST00000428494.6
ENST00000587427.6
ENST00000588352.5
ENST00000590249.5
ENST00000593209.5
CDS TCA 72 bp CCTCGTAGTGGGGAGCAGAGCCCGCAGAGGAATCTGTaGATAGACCCCATGTGCACACATACTTCCGGTGAA +
Preference number: 6 (lower is better)
Translates to: PRSGEQSPQRNL*IDPMCTHTSGE
Trigger: TTCACCGGAAGTATGTGTGCACATGGGGTCTATTCACAGATTCCTCTGCGGGCTCTGCTCCCCACTACGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414034.7
ENST00000428494.6
ENST00000585735.1
CDS TCA 72 bp TCCTGCTGGGTCTGGCTGGCCTTGGTCAGAGGGAGATaGTTCCGGAAGGTGCTTATGTCTATAGCCCCAATG +
Preference number: 6 (lower is better)
Translates to: SCWVWLALVRGR*FRKVLMSIAPM
Trigger: CATTGGGGCTATAGACATAAGCACCTTCCGGAATCATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588762.5
ENST00000590520.5
CDS GCA 72 bp CTTGTTAGCTGTAGGGCCCTGAGCAATTTAGTGGGCTaGACTGAGCTCTGTTTCCTGATCTGTCACAGCCCA +
Preference number: 6 (lower is better)
Translates to: LVSCRALSNLVG*TELCFLICHSP
Trigger: TGGGCTGTGACAGATCAGGAAACAGAGCTCAGTGCAGCCCACTAAATTGCTCAGGGCCCTACAGCTAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414034.7
ENST00000585375.1
ENST00000586692.5
ENST00000587427.6
ENST00000588762.5
ENST00000593209.5
CDS GCA 72 bp CTTGTTAGCTGTAGGGCCCTGAGCAATTTAGTGGGCTaGACTGAGCTCTGTTTCCTGATAGGAAGGGTTTCG +
Preference number: 6 (lower is better)
Translates to: LVSCRALSNLVG*TELCFLIGRVS
Trigger: CGAAACCCTTCCTATCAGGAAACAGAGCTCAGTGCAGCCCACTAAATTGCTCAGGGCCCTACAGCTAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590520.5
CDS GCA 72 bp CTTGTTAGCTGTAGGGCCCTGAGCAATTTAGTGGGCTaGACTGAGCTCTGTTTCCTGATCTGCAAAATGGGA +
Preference number: 6 (lower is better)
Translates to: LVSCRALSNLVG*TELCFLICKMG
Trigger: TCCCATTTTGCAGATCAGGAAACAGAGCTCAGTGCAGCCCACTAAATTGCTCAGGGCCCTACAGCTAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301671.12