RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GGA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000103365

Ensembl transcript IDs: ENST00000309859.8, ENST00000562117.1, ENST00000562944.5, ENST00000563047.1, ENST00000563494.5, ENST00000566547.1, ENST00000566651.1, ENST00000567201.5, ENST00000567468.5, ENST00000568799.1, ENST00000568922.1, ENST00000569182.1, ENST00000569189.2, ENST00000569300.5, ENST00000570111.5

Found 511 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGGATCCTGAGAAGGGCCCAGACTGGCTGCCCAACCCATGGACCTaGGGCCTGAGTAAGGCCTGGGAGCTGCTTTCCCCTCTGCCCAGG +
Preference number: 1 (lower is better)
Translates to: EDPEKGPDWLPNPWT*GLSKAWELLSPLPR
Trigger: CCTGGGCAGAGGGGAAAGCAGCTCCCAGGCCTTACTCAGGCCTCAGGTCCATGGGTTGGGCAGCCAGTCTGGGCCCTTCTCAGGATCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR TCA 90 bp CTGAGAAGGGCCCAGACTGGCTGCCCAACCCATGGACCTGAGGCCTaGGTAAGGCCTGGGAGCTGCTTTCCCCTCTGCCCAGGAACTCTG +
Preference number: 1 (lower is better)
Translates to: LRRAQTGCPTHGPEA*VRPGSCFPLCPGTL
Trigger: CAGAGTTCCTGGGCAGAGGGGAAAGCAGCTCCCAGGCCTTACTCAGGCCTCAGGTCCATGGGTTGGGCAGCCAGTCTGGGCCCTTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR CCA 90 bp CTCTGTCCAGGGGCGATTCTAAGGCACAGTGGTGAAGGACATGATTaGTCCCCCAAGTGTGGTCCTCAGGTCTCATGGCAGCCACTCGCC +
Preference number: 1 (lower is better)
Translates to: LCPGAILRHSGEGHD*SPKCGPQVSWQPLA
Trigger: GGCGAGTGGCTGCCATGAGACCTGAGGACCACACTTGGGGGACCAATCATGTCCTTCACCACTGTGCCTTAGAATCGCCCCTGGACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR TCA 90 bp GAGCTGGGCTCTAAGTGGCCACTGGACTTGCTGATTAGAAGGGAGTaGTGCCATAAACCACAGCCACTTTCAGGACAGCAGCCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: ELGSKWPLDLLIRRE*CHKPQPLSGQQPAS
Trigger: GGAGGCAGGCTGCTGTCCTGAAAGTGGCTGTGGTTTATGGCATCACTCCCTTCTAATCAGCAAGTCCAGTGGCCACTTAGAGCCCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR CCA 90 bp CCAAGACTAACCAGGTCCCTTTTAAGGTCCCTGAGAACAGCAGCCTaGGAGCAACCAAGCCTTTCAAAGGCTGACAAGGCACAGAGTGGA +
Preference number: 1 (lower is better)
Translates to: PRLTRSLLRSLRTAA*EQPSLSKADKAQSG
Trigger: TCCACTCTGTGCCTTGTCAGCCTTTGAAAGGCTTGGTTGCTCCCAGGCTGCTGTTCTCAGGGACCTTAAAAGGGACCTGGTTAGTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR GCA 90 bp GCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTaGTTTCAAGTAAGAGCATGTAGGTGGAAAGGGGCAGGACTCTGG +
Preference number: 1 (lower is better)
Translates to: ADTDEAGIRDPISLR*FQVRACRWKGAGLW
Trigger: CCAGAGTCCTGCCCCTTTCCACCTACATGCTCTTACTTGAAAGCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR CCA 90 bp AGGTCACGAAATGGGTCAACAGGACCCCCGAAGAGTTCAAGATACTaGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCA +
Preference number: 1 (lower is better)
Translates to: RSRNGSTGPPKSSRY*KALAMSARSPAHTS
Trigger: TGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTCGGGGGTCCTGTTGACCCATTTCGTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR TCA 90 bp CAACAGGACCCCCGAAGAGTTCAAGATACTGGAAAGCACTGGCCATaGGTGCCAGATCTCCAGCACACACATCATGAATTTGCTTCTCCC +
Preference number: 1 (lower is better)
Translates to: QQDPRRVQDTGKHWP*VPDLQHTHHEFASP
Trigger: GGGAGAAGCAAATTCATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTCGGGGGTCCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR TCA 90 bp TTAGAGCCACCTGACTACCAGGCCTGTGTGTGGACGGGAAAGTCCTaGGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGA +
Preference number: 1 (lower is better)
Translates to: LEPPDYQACVWTGKS*GLDSGKPSHLRDRG
Trigger: TCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCACACACAGGCCTGGTAGTCAGGTGGCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR GCA 90 bp AGGACCCCCGAAGAGTTCAAGATACTGGAAAGCACTGGCCATGAGTaGCAGATCTCCAGCACACACATCATGAATTTGCTTCTCCCCAGA +
Preference number: 1 (lower is better)
Translates to: RTPEEFKILESTGHE*QISSTHIMNLLLPR
Trigger: TCTGGGGAGAAGCAAATTCATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTCGGGGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR GCA 90 bp GAGACAAGGTCTTTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTaGCCCAAGACTAACCAGGTCCCTTTTAAGGTCCCTGAGAACAGC +
Preference number: 1 (lower is better)
Translates to: ETRSFLEESAQVDTL*PKTNQVPFKVPENS
Trigger: GCTGTTCTCAGGGACCTTAAAAGGGACCTGGTTAGTCTTGGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAAAGACCTTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR GCA 90 bp GACATGCAGAAACATGACTGTAGCAGAGATGATGATGATGAGAAATaGTTCGCATTTCCCACACTGCCGATATCCCAAGCCCTGTGCTAC +
Preference number: 1 (lower is better)
Translates to: DMQKHDCSRDDDDEK*FAFPTLPISQALCY
Trigger: GTAGCACAGGGCTTGGGATATCGGCAGTGTGGGAAATGCGAAGCATTTCTCATCATCATCATCTCTGCTACAGTCATGTTTCTGCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR GCA 90 bp AAGTCAGGCATCAGGAAGCCATTCAGAATTTTTCACCCTGTCAGATaGTCAGATTTGCTAGAGAACTCTGGTAGTGGCAAGAACCAGAGC +
Preference number: 1 (lower is better)
Translates to: KSGIRKPFRIFHPVR*SDLLENSGSGKNQS
Trigger: GCTCTGGTTCTTGCCACTACCAGAGTTCTCTAGCAAATCTGAGCATCTGACAGGGTGAAAAATTCTGAATGGCTTCCTGATGCCTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR CCA 90 bp CCCAAATCAGAGCAGTGGCAATGTAAGTGCAGGGAGGACATGATGTaGGATTATTTAGAAAACAGGCCAAATGACATGCAACTACTCTGC +
Preference number: 1 (lower is better)
Translates to: PKSEQWQCKCREDMM*DYLENRPNDMQLLC
Trigger: GCAGAGTAGTTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCTGCACTTACATTGCCACTGCTCTGATTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR TCA 90 bp TCACCCATTTTGACCAAAACCCTTCAGAGGGAGATGCTGTCATTATaGTGGGTACCTCTTCAAGACTACGCAACAGTAACAGAGCCTATA +
Preference number: 1 (lower is better)
Translates to: SPILTKTLQREMLSL*WVPLQDYATVTEPI
Trigger: TATAGGCTCTGTTACTGTTGCGTAGTCTTGAAGAGGTACCCATCATAATGACAGCATCTCCCTCTGAAGGGTTTTGGTCAAAATGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR TCA 90 bp GGGAGTCTGTCTCCTCAAAAGCAAGAATGTTCAGGTACACATGTGTaGGTTCACCTCCTAACTATAGGGGAGAAAGCCTGTCTTTATGTA +
Preference number: 1 (lower is better)
Translates to: GSLSPQKQECSGTHV*VHLLTIGEKACLYV
Trigger: TACATAAAGACAGGCTTTCTCCCCTATAGTTAGGAGGTGAACTCACACATGTGTACCTGAACATTCTTGCTTTTGAGGAGACAGACTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR GCA 90 bp ATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAACTACTCTaGGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAG +
Preference number: 1 (lower is better)
Translates to: MWDYLENRPNDMQLL*GYRRSRNQGPNKSQ
Trigger: CTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR CCA 90 bp CGACAGAAGACAGTTCCCTTTAGGCCTATCATCTCTAAATGCAACTaGCTTTCCATTTTCCACTTACTCAACACTCCACAAAGTACACTT +
Preference number: 1 (lower is better)
Translates to: RQKTVPFRPIISKCN*LSIFHLLNTPQSTL
Trigger: AAGTGTACTTTGTGGAGTGTTGAGTAAGTGGAAAATGGAAAGCCAGTTGCATTTAGAGATGATAGGCCTAAAGGGAACTGTCTTCTGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR GCA 90 bp TGCCCAGTCTTAAGTTCATGGAAGATAATAGGAAGAGTAATTAACTaGAGCAAAAGGTTAGGACAAAACATGGCATTATCAGGGCTTGAA +
Preference number: 1 (lower is better)
Translates to: CPVLSSWKIIGRVIN*SKRLGQNMALSGLE
Trigger: TTCAAGCCCTGATAATGCCATGTTTTGTCCTAACCTTTTGCTGCAGTTAATTACTCTTCCTATTATCTTCCATGAACTTAAGACTGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR TCA 90 bp AGCCATCTCAGCCAGGCTCAGGTTCCTTCTCCCACCCATCAGGCCAAGCAGGACCCCAACCCATGGACCTaGGGCCTGAGTAAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: SHLSQAQVPSPTHQAKQDPNPWT*GLSKAW
Trigger: CCAGGCCTTACTCAGGCCTCAGGTCCATGGGTTGGG...GTCCTGCTTGGCCTGATGGGTGGGAGAAGGAACCTGAGCCTGGCTGAGATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CCA 90 bp CAGCTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTGGTCCTCAGGTCTCATaGCAGCCACTCGCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: QLLGLQSPPPSHLSQAQVGPQVS*QPLAWE
Trigger: TTCCCAGGCGAGTGGCTGCCATGAGACCTGAGGACC...AACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CCA 90 bp ATTGTGGCTGTGGTGAAGCAGGCCCTGGTCTTGGCAGATGATACCAGAAGGGCAGAGAAGGGCCCAGACTaGCTGCCCAACCCATGGACC +
Preference number: 2 (lower is better)
Translates to: IVAVVKQALVLADDTRRAEKGPD*LPNPWT
Trigger: GGTCCATGGGTTGGGCAGCCAGTCTGGGCCCTTCTC...TGCCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTTCACCACAGCCACAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR TCA 90 bp GCCTGCCTCCTCTCCTCCTACCCCTATCCTGTCCAACACCTAAGCATAGTAGTACATGGACCTGAGGCCTaGGTAAGGCCTGGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: ACLLSSYPYPVQHLSIVVHGPEA*VRPGSC
Trigger: GCAGCTCCCAGGCCTTACTCAGGCCTCAGGTCCATG...TACTACTATGCTTAGGTGTTGGACAGGATAGGGGTAGGAGGAGAGGAGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR TCA 90 bp CTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTCCTTTGACACCCAGAGCCTaGCGTCAGGATAGGACTCTT +
Preference number: 2 (lower is better)
Translates to: LLGLQSPPPSHLSQAQVPLTPRA*RQDRTL
Trigger: AAGAGTCCTATCCTGACGTCAGGCTCTGGGTGTCAA...AGGAACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CCA 90 bp CAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGCCAGGGCGCATGTGTaGGGCCATTGGGGTCAGTGT +
Preference number: 2 (lower is better)
Translates to: QFVQETKFGHLAVELLPTARAHV*GHWGQC
Trigger: ACACTGACCCCAATGGCCCCACACATGCGCCCTGGC...TGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563047.1
3UTR CAA 90 bp TCTTGCAGTTTCAAAGGTAGAAACCCACCCAGCCAGTTCAGCTGCTaGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: SCSFKGRNPPSQFSC*DFKALRLAISARLR
Trigger: CCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTGAACTGGCTGGGTGGGTTTCTACCTTTGAAACTGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR CAA 90 bp AGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGAATTaGCTTCTCCCCAGAGGAAAAGAAGCTCCTTCAGGGTGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: STGHECQISSTHIMN*LLPRGKEAPSGWCL
Trigger: CAGGCACCACCCTGAAGGAGCTTCTTTTCCTCTGGGGAGAAGCAAATTCATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR-3UTR GCA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACATTCAGGACAGCAGCCTaGCTCCTCTCCTCCTACCCC +
Preference number: 2 (lower is better)
Translates to: QETSLGNTEIQSLRKTATFRTAA*LLSSYP
Trigger: GGGGTAGGAGGAGAGGAGGCAGGCTGCTGTCCTGAA...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CCA 90 bp ACCAGAAGGGCACTGAGTGCCAGCGTGCAACTTGAATTTGATCCCATAAAGTCAGAAGCTCCTTCAGGGTaGTGCCTGGCTCAGGGTAGC +
Preference number: 2 (lower is better)
Translates to: TRRALSASVQLEFDPIKSEAPSG*CLAQGS
Trigger: GCTACCCTGAGCCAGGCACCACCCTGAAGGAGCTTC...TGACTTTATGGGATCAAATTCAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR-3UTR TCA 90 bp AGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGACCCCCGAAGAGTTCAAGAAAGCCTTTCAAAGGCTaGCAAGGCACAGAGTGGATG +
Preference number: 2 (lower is better)
Translates to: SHGGRSRNGSTGPPKSSRKPFKG*QGTEWM
Trigger: CATCCACTCTGTGCCTTGTCAGCCTTTGAAAGGCTT...TCTTGAACTCTTCGGGGGTCCTGTTGACCCATTTCGTGACCTACCTCCGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CCA 90 bp GACCCAATAAGTCTCAGGTGCTTTCAAGTAAGAGCATGTAGGTGGAAAGGGGCAGCCAGTTCAGCTGCTTaGACTTCAAAGCCCTCCGCC +
Preference number: 2 (lower is better)
Translates to: DPISLRCFQVRACRWKGAASSAA*TSKPSA
Trigger: GGCGGAGGGCTTTGAAGTCCAAGCAGCTGAACTGGC...TGCCCCTTTCCACCTACATGCTCTTACTTGAAAGCACCTGAGACTTATTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR TCA 90 bp GAGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGATAAAACCTCCAACCTaGGGCAGGGACAGTGTCGCT +
Preference number: 2 (lower is better)
Translates to: ENSGSGKNQSCYSELGQRIKPPT*GRDSVA
Trigger: AGCGACACTGTCCCTGCCTCAGGTTGGAGGTTTTAT...CCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR TCA 90 bp GGCCAAATGACATGCAACTACTCTGCGGATACAGACGAAGCAGGAATCAGGGACTGGACGGGAAAGTCCTaGGGATTGGACTCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: GQMTCNYSADTDEAGIRDWTGKS*GLDSGK
Trigger: TTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCA...GTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR-3UTR GCA 90 bp TTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGAGAGCTTCCTTCTCTTaGGGAGACTGGATCTTGTGG +
Preference number: 2 (lower is better)
Translates to: FVQETKFGHLAVELLPTVRASFS*GDWILW
Trigger: CCACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCT...CACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR-3UTR GCA 90 bp GATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCAGAGCTTCCTTCTCTTaGGGAGACTGGATCTTGTGG +
Preference number: 2 (lower is better)
Translates to: DQFVQETKFGHLAVELLPRASFS*GDWILW
Trigger: CCACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCT...GGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR-3UTR CCA 90 bp ACCAGAAGGGCACTGAGTGCCAGCGTGCAACTTGAATTTGATCCCATAAAGTCATTGGTCCCCCAAGTGTaGTCCTCAGGTCTCATGGCA +
Preference number: 2 (lower is better)
Translates to: TRRALSASVQLEFDPIKSLVPQV*SSGLMA
Trigger: TGCCATGAGACCTGAGGACCACACTTGGGGGACCAA...TGACTTTATGGGATCAAATTCAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CCA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACAGCGACAGCAAGGAGGTaGCAGCTTGAGAGAGGTCTA +
Preference number: 2 (lower is better)
Translates to: QETSLGNTEIQSLRKTATATARR*QLERGL
Trigger: TAGACCTCTCTCAAGCTGCCACCTCCTTGCTGTCGC...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR TCA 90 bp TTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCAAGACTAACCAGGTCCGCACTGAAACACCGTaGTTAGTCCTGACTAGACAG +
Preference number: 2 (lower is better)
Translates to: FLEESAQVDTLCPKTNQVRTETP*LVLTRQ
Trigger: CTGTCTAGTCAGGACTAATCACGGTGTTTCAGTGCG...GACCTGGTTAGTCTTGGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR TCA 90 bp GACCCAATAAGTCTCAGGTGCTTTCAAGTAAGAGCATGTAGGTGGAAAGGGGCACTTGGCACTCCGCACTaGAACACCGTGATTAGTCCT +
Preference number: 2 (lower is better)
Translates to: DPISLRCFQVRACRWKGALGTPH*NTVISP
Trigger: AGGACTAATCACGGTGTTTCAGTGCGGAGTGCCAAG...TGCCCCTTTCCACCTACATGCTCTTACTTGAAAGCACCTGAGACTTATTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR TCA 90 bp CTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAAAGAGCGGAAAGCACTGGCCATaGGTGCCAGATCTCCAGCAC +
Preference number: 2 (lower is better)
Translates to: LRIGLWKTITLKRQRKKSGKHWP*VPDLQH
Trigger: GTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCC...GCTCTTTTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR-3UTR GCA 90 bp TGTGTGGACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGTCGCATTTCCCACACTaGCGATATCCCAAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: CVDGKVLRIGLWKTITLKSHFPH*RYPKPC
Trigger: ACAGGGCTTGGGATATCGGCAGTGTGGGAAATGCGA...CTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR GCA 90 bp ATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCAAGAGCTTCCTTCTCTTaGGGAGACTGGATCTTGTGG +
Preference number: 2 (lower is better)
Translates to: ISSFRKRNLATSLWNFSPRASFS*GDWILW
Trigger: CCACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCT...TGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR CAA 90 bp TACTTTGGGGACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTaGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCAC +
Preference number: 2 (lower is better)
Translates to: YFGDNTLISSFRKRN*ATSLWNFSPQWFMH
Trigger: GTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR-3UTR GCA 90 bp ATGGAGACAAGGTCTTTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCTGTCGCTCGCTGACATaGAGAAACATGACTGTAGCA +
Preference number: 2 (lower is better)
Translates to: METRSFLEESAQVDTLCPCRSLT*RNMTVA
Trigger: TGCTACAGTCATGTTTCTGCATGTCAGCGAGCGACA...GGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAAAGACCTTGTCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR GCA 90 bp TTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCAGAGCTTCCTTCTCTTaGGGAGACTGGATCTTGTGG +
Preference number: 2 (lower is better)
Translates to: LISSFRKRNLATSLWNFSRASFS*GDWILW
Trigger: CCACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCT...GGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR-3UTR CCA 90 bp CTTGATGTCTTCCGGAAACCAGACTGTCCAACTGAAGAGTATTTCAATGACTCTTTGGCCACCTCGCTGTaGAACTTCTCCCCACAGTGG +
Preference number: 2 (lower is better)
Translates to: LDVFRKPDCPTEEYFNDSLATSL*NFSPQW
Trigger: CCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAA...AGAGTCATTGAAATACTCTTCAGTTGGACAGTCTGGTTTCCGGAAGACATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563494.5
ENST00000570111.5
3UTR CAA 90 bp AGATTACCACTGTCAGATGTGCACACAAACATCTTGGTGCATCGCTaGGCTTTAAAACAAACTGGGGTCAGGACATGGTGGCTCATGCCT +
Preference number: 2 (lower is better)
Translates to: RLPLSDVHTNILVHR*ALKQTGVRTWWLMP
Trigger: AGGCATGAGCCACCATGTCCTGACCCCAGTTTGTTTTAAAGCCAAGCGATGCACCAAGATGTTTGTGTGCACATCTGACAGTGGTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR CAA 90 bp TCCCTGACCCAAAGATTACCACTGTCAGATGTGCACACAAACATCTaGGTGCATCGCTTGGCTTTAAAACAAACTGGGGTCAGGACATGG +
Preference number: 2 (lower is better)
Translates to: SLTQRLPLSDVHTNI*VHRLALKQTGVRTW
Trigger: CCATGTCCTGACCCCAGTTTGTTTTAAAGCCAAGCGATGCACCAAGATGTTTGTGTGCACATCTGACAGTGGTAATCTTTGGGTCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR TCA 90 bp TACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCAGCCTAAGCTTGAAATaGAGGGTCCATCTTGTGAAA +
Preference number: 2 (lower is better)
Translates to: YSADTDEAGIRDPISLRCSLSLK*RVHLVK
Trigger: TTTCACAAGATGGACCCTTCATTTCAAGCTTAGGCT...GCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR TCA 90 bp ATGGAGACAAGGTCTTTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCAAGGCACAGAGTGGATaGATGGAACGAACGATACAT +
Preference number: 2 (lower is better)
Translates to: METRSFLEESAQVDTLCPKAQSG*MERTIH
Trigger: ATGTATCGTTCGTTCCATTCATCCACTCTGTGCCTT...GGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAAAGACCTTGTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR TCA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACACTCATTCACCCATTTTaGCCAAAACCCTTCAGAGGG +
Preference number: 2 (lower is better)
Translates to: QETSLGNTEIQSLRKTATLIHPF*PKPFRG
Trigger: CCCTCTGAAGGGTTTTGGTCAAAATGGGTGAATGAG...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CCA 90 bp CAGATAACCCCTGACAGACTGAAATACGATCTGGCGACAGCAAGGAGGTGGCAGCACAGAGTGGATGAATaGAACGAACGATACATGAAA +
Preference number: 2 (lower is better)
Translates to: QITPDRLKYDLATARRWQHRVDE*NERYMK
Trigger: TTTCATGTATCGTTCGTTCCATTCATCCACTCTGTG...CTGCCACCTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR GCA 90 bp CAGTGGAACCTCCAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGGATGATGATGAGAAATaGTTCGCATTTCCCACACTG +
Preference number: 2 (lower is better)
Translates to: QWNLQIQITPDRLKYDLADDDEK*FAFPTL
Trigger: CAGTGTGGGAAATGCGAAGCATTTCTCATCATCATC...CGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTGGAGGTTCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CCA 90 bp AGGGAGGACATGATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAACTATGGCAGCCACTCGCCTaGGAACAGTGCAACAAGCAT +
Preference number: 2 (lower is better)
Translates to: REDMMWDYLENRPNDMQLWQPLA*EQCNKH
Trigger: ATGCTTGTTGCACTGTTCCCAGGCGAGTGGCTGCCA...TAGTTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR GCA 90 bp CTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAAAGAGCCAAGTAGATACTCTCTaGCCCAAGACTAACCAGGTC +
Preference number: 2 (lower is better)
Translates to: LRIGLWKTITLKRQRKKSQVDTL*PKTNQV
Trigger: GACCTGGTTAGTCTTGGGGCAGAGAGTATCTACTTG...GCTCTTTTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CCA 90 bp AGGGAGGACATGATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAACTACTGAGAACAGCAGCCTaGGAGCAACCAAGCCTTTCA +
Preference number: 2 (lower is better)
Translates to: REDMMWDYLENRPNDMQLLRTAA*EQPSLS
Trigger: TGAAAGGCTTGGTTGCTCCCAGGCTGCTGTTCTCAG...TAGTTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR CAA 90 bp ATCAGGAAGCCATTCAGAATTTTTCACCCTGTCAGATGCTCAGATTaGCTAGAGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCA +
Preference number: 2 (lower is better)
Translates to: IRKPFRIFHPVRCSD*LENSGSGKNQSCYS
Trigger: TGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCTCTAGCAAATCTGAGCATCTGACAGGGTGAAAAATTCTGAATGGCTTCCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR-3UTR TCA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACATCAACACTATCTTCATaGCCTGTTTGTGTTCAGAGT +
Preference number: 2 (lower is better)
Translates to: QETSLGNTEIQSLRKTATSTLSS*PVCVQS
Trigger: ACTCTGAACACAAACAGGTCATGAAGATAGTGTTGA...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CCA 90 bp CGAATCTTGATGTCTTCCGGAAACCAGACTGTCCAACTGAAGAGTATTTCAATGTCAGGAAACGAAATTTaGCCACCTCGCTGTGGAACT +
Preference number: 2 (lower is better)
Translates to: RILMSSGNQTVQLKSISMSGNEI*PPRCGT
Trigger: AGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGA...CATTGAAATACTCTTCAGTTGGACAGTCTGGTTTCCGGAAGACATCAAGATTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563494.5
ENST00000570111.5
3UTR-3UTR CCA 90 bp AATCTTGATGTCTTCCGGAAACCAGACTGTCCAACTGAAGAGTATTTCAATGACGGACCCCAGGTACTTTaGGGACAACACTTTGATCAG +
Preference number: 2 (lower is better)
Translates to: NLDVFRKPDCPTEEYFNDGPQVL*GQHFDQ
Trigger: CTGATCAAAGTGTTGTCCCCAAAGTACCTGGGGTCC...GTCATTGAAATACTCTTCAGTTGGACAGTCTGGTTTCCGGAAGACATCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563494.5
ENST00000570111.5
3UTR CAA 90 bp CAAGCATTCCATTTAGAAGATCTTCCAGAACACACACAAGAAGCATaGTCTAATGAAAATGGAGACAAGGTCTTTCTTGGAAGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: QAFHLEDLPEHTQEA*SNENGDKVFLGREC
Trigger: GCACTCTCTTCCAAGAAAGACCTTGTCTCCATTTTCATTAGACAATGCTTCTTGTGTGTGTTCTGGAAGATCTTCTAAATGGAATGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR TCA 72 bp GAGAAGGGCCCAGACTGGCTGCCCAACCCATGGACCTaGGGCCTGAGTAAGGCCTGGGAGCTGCTTTCCCCT +
Preference number: 3 (lower is better)
Translates to: EKGPDWLPNPWT*GLSKAWELLSP
Trigger: AGGGGAAAGCAGCTCCCAGGCCTTACTCAGGCCTCAGGTCCATGGGTTGGGCAGCCAGTCTGGGCCCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CAA 90 bp TTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACATCTCCAGCTGCGGAGACTGGATCTaGTGGGCCAGTAGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: LATSLWNFSPQWFMHISSCGDWI*WASSQG
Trigger: GCCCTGGCTACTGGCCCACAAGATCCAGTCTCCGCA...GCTGGAGATGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR-3UTR CAA 90 bp CGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTGCGGAGACTGGATCTaGTGGGCCAGTAGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: RSGNEIWPPRCGTSPHSGCGDWI*WASSQG
Trigger: GCCCTGGCTACTGGCCCACAAGATCCAGTCTCCGCA...ACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR TCA 72 bp TGTGGCTGTGGTGAAGCAGGCCCTGGTCTTGGCAGATaGTACCAGAAGGGCACTGAGTGCCAGCGTGCAACT +
Preference number: 3 (lower is better)
Translates to: CGCGEAGPGLGR*YQKGTECQRAT
Trigger: AGTTGCACGCTGGCACTCAGTGCCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTTCACCACAGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR CCA 72 bp CATGATTGGTCCCCCAAGTGTGGTCCTCAGGTCTCATaGCAGCCACTCGCCTGGGAACAGTGCAACAAGCAT +
Preference number: 3 (lower is better)
Translates to: HDWSPKCGPQVS*QPLAWEQCNKH
Trigger: ATGCTTGTTGCACTGTTCCCAGGCGAGTGGCTGCCATGAGACCTGAGGACCACACTTGGGGGACCAATCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CAA 90 bp TTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCTGCGGAGACTGGATCTaGTGGGCCAGTAGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: LISSFRKRNLATSLWNFSCGDWI*WASSQG
Trigger: GCCCTGGCTACTGGCCCACAAGATCCAGTCTCCGCA...GGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR TCA 72 bp GGTAGGAGCTGGGCTCTAAGTGGCCACTGGACTTGCTaGTTAGAAGGGAGTGATGCCATAAACCACAGCCAC +
Preference number: 3 (lower is better)
Translates to: GRSWALSGHWTC*LEGSDAINHSH
Trigger: GTGGCTGTGGTTTATGGCATCACTCCCTTCTAATCAGCAAGTCCAGTGGCCACTTAGAGCCCAGCTCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR CCA 72 bp ACCAGGTCCCTTTTAAGGTCCCTGAGAACAGCAGCCTaGGAGCAACCAAGCCTTTCAAAGGCTGACAAGGCA +
Preference number: 3 (lower is better)
Translates to: TRSLLRSLRTAA*EQPSLSKADKA
Trigger: TGCCTTGTCAGCCTTTGAAAGGCTTGGTTGCTCCCAGGCTGCTGTTCTCAGGGACCTTAAAAGGGACCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR GCA 72 bp AGTTTCAAAGGTAGAAACCCACCCAGCCAGTTCAGCTaGTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCA +
Preference number: 3 (lower is better)
Translates to: SFKGRNPPSQFS*LDFKALRLAIS
Trigger: TGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTGAACTGGCTGGGTGGGTTTCTACCTTTGAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR CCA 72 bp AATGGGTCAACAGGACCCCCGAAGAGTTCAAGATACTaGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: NGSTGPPKSSRY*KALAMSARSPA
Trigger: TGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTCGGGGGTCCTGTTGACCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR-3UTR CAA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACAAGCCAGTTCAGCTGCTaGGACTTCAAAGCCCTCCGC +
Preference number: 3 (lower is better)
Translates to: QETSLGNTEIQSLRKTATSQFSC*DFKALR
Trigger: GCGGAGGGCTTTGAAGTCCAAGCAGCTGAACTGGCT...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CAA 90 bp TTTGGGGACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGGCATGTGTGGGGCCATaGGGGTCAGTGTTCACCTGC +
Preference number: 3 (lower is better)
Translates to: FGDNTLISSFRKRNLATSACVGP*GSVFTC
Trigger: GCAGGTGAACACTGACCCCAATGGCCCCACACATGC...CGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563047.1
3UTR-3UTR CAA 90 bp CAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAAAGAGCTTCCTTCTCTaGCGGAGACTGGATCTTGTG +
Preference number: 3 (lower is better)
Translates to: QFVQETKFGHLAVELLPTKSFLL*RRLDLV
Trigger: CACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCTT...TGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR-3UTR CAA 90 bp GATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCAAGAGCTTCCTTCTCTaGCGGAGACTGGATCTTGTG +
Preference number: 3 (lower is better)
Translates to: DQFVQETKFGHLAVELLPKSFLL*RRLDLV
Trigger: CACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCTT...GGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR-3UTR CAA 90 bp CAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACATTCAGGAAACGAAATTaGGCCACCTCGCTGTGGAAC +
Preference number: 3 (lower is better)
Translates to: QFVQETKFGHLAVELLPTFRKRN*ATSLWN
Trigger: GTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAA...TGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR TCA 72 bp AACAGCAGCCTGGGAGCAACCAAGCCTTTCAAAGGCTaGCAAGGCACAGAGTGGATGAATGGAACGAACGAT +
Preference number: 3 (lower is better)
Translates to: NSSLGATKPFKG*QGTEWMNGTND
Trigger: ATCGTTCGTTCCATTCATCCACTCTGTGCCTTGTCAGCCTTTGAAAGGCTTGGTTGCTCCCAGGCTGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR TCA 72 bp CCTGACTACCAGGCCTGTGTGTGGACGGGAAAGTCCTaGGGATTGGACTCTGGAAAACCATCACACTTAAGA +
Preference number: 3 (lower is better)
Translates to: PDYQACVWTGKS*GLDSGKPSHLR
Trigger: TCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCACACACAGGCCTGGTAGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR CCA 72 bp AGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTaGAACTTCTCCCCACAGTGGTTCATGCACATCTCC +
Preference number: 3 (lower is better)
Translates to: SSFRKRNLATSL*NFSPQWFMHIS
Trigger: GGAGATGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR-3UTR CAA 90 bp GGGGACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGAAGAGCTTCCTTCTCTaGCGGAGACTGGATCTTGTG +
Preference number: 3 (lower is better)
Translates to: GDNTLISSFRKRNLATSLKSFLL*RRLDLV
Trigger: CACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCTT...CAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR-3UTR CAA 90 bp AACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACCAGGCTGGTAATCACTaGCTGGAGACTGCGCTGGAA +
Preference number: 3 (lower is better)
Translates to: NTLISSFRKRNLATSLWNQAGNH*LETALE
Trigger: TTCCAGCGCAGTCTCCAGCAAGTGATTACCAGCCTG...GTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569189.2
3UTR TCA 72 bp TCTAAGTGGCCACTGGACTTGCTGATTAGAAGGGAGTaGTGCCATAAACCACAGCCACTTTCAGGACAGCAG +
Preference number: 3 (lower is better)
Translates to: SKWPLDLLIRRE*CHKPQPLSGQQ
Trigger: CTGCTGTCCTGAAAGTGGCTGTGGTTTATGGCATCACTCCCTTCTAATCAGCAAGTCCAGTGGCCACTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR TCA 72 bp GAAGCAACAGTGGAACCTCCAGATACAGATAACCCCTaGCAGACTGAAATACGATCTGGCGACAGCAAGGAG +
Preference number: 3 (lower is better)
Translates to: EATVEPPDTDNP*QTEIRSGDSKE
Trigger: CTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTGGAGGTTCCACTGTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR GCA 72 bp GACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTaGTTTCAAGTAAGAGCATGTAGGTGGAAAGGGGCA +
Preference number: 3 (lower is better)
Translates to: DEAGIRDPISLR*FQVRACRWKGA
Trigger: TGCCCCTTTCCACCTACATGCTCTTACTTGAAAGCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR-3UTR CAA 90 bp TTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCAAGAGCTTCCTTCTCTaGCGGAGACTGGATCTTGTG +
Preference number: 3 (lower is better)
Translates to: LISSFRKRNLATSLWNFSKSFLL*RRLDLV
Trigger: CACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCTT...GGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
3UTR GCA 72 bp TCTTTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTaGCCCAAGACTAACCAGGTCCCTTTTAAGGTCCCT +
Preference number: 3 (lower is better)
Translates to: SFLEESAQVDTL*PKTNQVPFKVP
Trigger: AGGGACCTTAAAAGGGACCTGGTTAGTCTTGGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CAA 90 bp TGCAGGGAGGACATGATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAAGTCAGGATAGGACTCTaGGCACTCCGCACTGAAACA +
Preference number: 3 (lower is better)
Translates to: CREDMMWDYLENRPNDMQVRIGL*ALRTET
Trigger: TGTTTCAGTGCGGAGTGCCAAGAGTCCTATCCTGAC...TTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR-3UTR CAA 90 bp CTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAAAGAGCGAGACAAGGTCTTTCTaGGAAGAGAGTGCCCAAGTA +
Preference number: 3 (lower is better)
Translates to: LRIGLWKTITLKRQRKKSETRSF*EESAQV
Trigger: TACTTGGGCACTCTCTTCCAAGAAAGACCTTGTCTC...GCTCTTTTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR TCA 72 bp CAAAAGGTTAGGACAAAACATGGCATTATCAGGGCTTaGAAGGACTTTATTGTGGCTGTGGTGAAGCAGGCC +
Preference number: 3 (lower is better)
Translates to: QKVRTKHGIIRA*KDFIVAVVKQA
Trigger: GGCCTGCTTCACCACAGCCACAATAAAGTCCTTTCAAGCCCTGATAATGCCATGTTTTGTCCTAACCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR GCA 72 bp GAAGAGTTCAAGATACTGGAAAGCACTGGCCATGAGTaGCAGATCTCCAGCACACACATCATGAATTTGCTT +
Preference number: 3 (lower is better)
Translates to: EEFKILESTGHE*QISSTHIMNLL
Trigger: AAGCAAATTCATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR TCA 72 bp TCTCCTCAAAAGCAAGAATGTTCAGGTACACATGTGTaGGTTCACCTCCTAACTATAGGGGAGAAAGCCTGT +
Preference number: 3 (lower is better)
Translates to: SPQKQECSGTHV*VHLLTIGEKAC
Trigger: ACAGGCTTTCTCCCCTATAGTTAGGAGGTGAACTCACACATGTGTACCTGAACATTCTTGCTTTTGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR GCA 72 bp TATTTAGAAAACAGGCCAAATGACATGCAACTACTCTaGGGATACAGACGAAGCAGGAATCAGGGACCCAAT +
Preference number: 3 (lower is better)
Translates to: YLENRPNDMQLL*GYRRSRNQGPN
Trigger: ATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCCTGTTTTCTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR-3UTR CAA 90 bp CTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAAAGAGCCACACACAAGAAGCATaGTCTAATGAAAATGGAGAC +
Preference number: 3 (lower is better)
Translates to: LRIGLWKTITLKRQRKKSHTQEA*SNENGD
Trigger: GTCTCCATTTTCATTAGACAATGCTTCTTGTGTGTG...GCTCTTTTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR TCA 72 bp AGCCTGTCTTTATGTATAAGTCTCATTCACCCATTTTaGCCAAAACCCTTCAGAGGGAGATGCTGTCATTAT +
Preference number: 3 (lower is better)
Translates to: SLSLCISLIHPF*PKPFRGRCCHY
Trigger: ATAATGACAGCATCTCCCTCTGAAGGGTTTTGGTCAAAATGGGTGAATGAGACTTATACATAAAGACAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTCCTACCTGCAGGGCCTCCTaGTCGGGCGGGGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LLGLQSPPPSHLSQAQVPTCRAS*SGGACP
Trigger: AGGGCAGGCCCCGCCCGACCAGGAGGCCCTGCAGGT...AGGAACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp AGCCATCTCAGCCAGGCTCAGGTTCCTTCTCCCACCCATCAGGCCAAGCAGGACCTGAACACCACCGCCTaGCAGCGTGCTGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SHLSQAQVPSPTHQAKQDLNTTA*QRAGGG
Trigger: CCCTCCTCCAGCACGCTGCCAGGCGGTGGTGTTCAG...GTCCTGCTTGGCCTGATGGGTGGGAGAAGGAACCTGAGCCTGGCTGAGATGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp AGCCATCTCAGCCAGGCTCAGGTTCCTTCTCCCACCCATCAGGCCAAGCAGGACGCTCCTTCAGGGTGGTaGCTGGCTCAGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SHLSQAQVPSPTHQAKQDAPSGW*LAQGSW
Trigger: CCAGCTACCCTGAGCCAGGCACCACCCTGAAGGAGC...GTCCTGCTTGGCCTGATGGGTGGGAGAAGGAACCTGAGCCTGGCTGAGATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp AGCCATCTCAGCCAGGCTCAGGTTCCTTCTCCCACCCATCAGGCCAAGCAGGACGAGAAGGGCCCAGACTaGCTGCCCAACCCATGGACC +
Preference number: 4 (lower is better)
Translates to: SHLSQAQVPSPTHQAKQDEKGPD*LPNPWT
Trigger: GGTCCATGGGTTGGGCAGCCAGTCTGGGCCCTTCTC...GTCCTGCTTGGCCTGATGGGTGGGAGAAGGAACCTGAGCCTGGCTGAGATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp AGCCATCTCAGCCAGGCTCAGGTTCCTTCTCCCACCCATCAGGCCAAGCAGGACGGTCCTCAGGTCTCATaGCAGCCACTCGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SHLSQAQVPSPTHQAKQDGPQVS*QPLAWE
Trigger: TTCCCAGGCGAGTGGCTGCCATGAGACCTGAGGACC...GTCCTGCTTGGCCTGATGGGTGGGAGAAGGAACCTGAGCCTGGCTGAGATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGACCCCCGAGGCAGGAGGACTGCTTaGGCCCAGGAGACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GKRAVTEVGHEMGQQDPRGRRTA*AQETSL
Trigger: CAGGCTGGTCTCCTGGGCTCAAGCAGTCCTCCTGCC...TCGGGGGTCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp AGCCATCTCAGCCAGGCTCAGGTTCCTTCTCCCACCCATCAGGCCAAGCAGGACGCACTCCAGCCTGAGTaGCAGAGTGAGATATGGCCT +
Preference number: 4 (lower is better)
Translates to: SHLSQAQVPSPTHQAKQDALQPE*QSEIWP
Trigger: AGGCCATATCTCACTCTGTCACTCAGGCTGGAGTGC...GTCCTGCTTGGCCTGATGGGTGGGAGAAGGAACCTGAGCCTGGCTGAGATGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp ATTGTGGCTGTGGTGAAGCAGGCCCTGGTCTTGGCAGATGATACCAGAAGGGCAGCCAGGGCGCATGTGTaGGGCCATTGGGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: IVAVVKQALVLADDTRRAARAHV*GHWGQC
Trigger: ACACTGACCCCAATGGCCCCACACATGCGCCCTGGC...TGCCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTTCACCACAGCCACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp ATGGAGACAAGGTCTTTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCGGGCGGGGCCTGCCCTaGCCTGCGGTACATGCTCAG +
Preference number: 4 (lower is better)
Translates to: METRSFLEESAQVDTLCPGRGLP*PAVHAQ
Trigger: CTGAGCATGTACCGCAGGCCAGGGCAGGCCCCGCCC...GGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAAAGACCTTGTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGACCCCCGATCCGGTCATACACAATaGGAGGCGGCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GKRAVTEVGHEMGQQDPRSGHTQ*EAAGCW
Trigger: CCAGCAGCCTGCCGCCTCTCATTGTGTATGACCGGA...TCGGGGGTCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp AGCCATCTCAGCCAGGCTCAGGTTCCTTCTCCCACCCATCAGGCCAAGCAGGACCAGCCACTTGAAACATaGTATCCCAGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SHLSQAQVPSPTHQAKQDQPLET*YPRQAG
Trigger: CCCAGCCTGTCTGGGATATCATGTTTCAAGTGGCTG...GTCCTGCTTGGCCTGATGGGTGGGAGAAGGAACCTGAGCCTGGCTGAGATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GCCTGCCTCCTCTCCTCCTACCCCTATCCTGTCCAACACCTAAGCATAGTAGTACCCAACCCATGGACCTaGGGCCTGAGTAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ACLLSSYPYPVQHLSIVVPNPWT*GLSKAW
Trigger: CCAGGCCTTACTCAGGCCTCAGGTCCATGGGTTGGG...TACTACTATGCTTAGGTGTTGGACAGGATAGGGGTAGGAGGAGAGGAGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp CTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTCCTTGGTTTAGAGCCACCTaGCTACCAGGCCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLGLQSPPPSHLSQAQVPWFRAT*LPGLCV
Trigger: CACACACAGGCCTGGTAGTCAGGTGGCTCTAAACCA...AGGAACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp AGCCATCTCAGCCAGGCTCAGGTTCCTTCTCCCACCCATCAGGCCAAGCAGGACGGTCCTCGGGGTGGTTaGTCTTTAGAAGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SHLSQAQVPSPTHQAKQDGPRGG*SLEALS
Trigger: TGACAAGGCTTCTAAAGAGCAACCACCCCGAGGACC...GTCCTGCTTGGCCTGATGGGTGGGAGAAGGAACCTGAGCCTGGCTGAGATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp CAGATAACCCCTGACAGACTGAAATACGATCTGGCGACAGCAAGGAGGTGGCAGCACCGCCTGGCAGCGTaGTGGAGGAGGGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: QITPDRLKYDLATARRWQHRLAA*WRRDSS
Trigger: AGAGGAATCCCTCCTCCAGCACGCTGCCAGGCGGTG...CTGCCACCTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CAGCTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTCATGTGTGGGGCCATTaGGGTCAGTGTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: QLLGLQSPPPSHLSQAQVHVWGH*GQCSPA
Trigger: AGCAGGTGAACACTGACCCCAATGGCCCCACACATG...AACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTCCTCCCAGGAGACCAGCCTaGGTAACACAGAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: LLGLQSPPPSHLSQAQVPPRRPA*VTQRSS
Trigger: ACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTGGG...AGGAACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp ATTGTGGCTGTGGTGAAGCAGGCCCTGGTCTTGGCAGATGATACCAGAAGGGCAGGAAAGCACTGGCCATaGGTGCCAGATCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: IVAVVKQALVLADDTRRAGKHWP*VPDLQH
Trigger: GTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCC...TGCCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTTCACCACAGCCACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp CAGATAACCCCTGACAGACTGAAATACGATCTGGCGACAGCAAGGAGGTGGCAGTTCAGGACAGCAGCCTaGAGGTCCTCGGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QITPDRLKYDLATARRWQFRTAA*RSSGWL
Trigger: CAACCACCCCGAGGACCTTCAGGCTGCTGTCCTGAA...CTGCCACCTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567468.5
CDS-3UTR GCA 90 bp AGCCATCTCAGCCAGGCTCAGGTTCCTTCTCCCACCCATCAGGCCAAGCAGGACATGCTCAGCATCTCCTaGAGCACCTTCACATGGCTT +
Preference number: 4 (lower is better)
Translates to: SHLSQAQVPSPTHQAKQDMLSIS*STFTWL
Trigger: AAGCCATGTGAAGGTGCTGCAGGAGATGCTGAGCAT...GTCCTGCTTGGCCTGATGGGTGGGAGAAGGAACCTGAGCCTGGCTGAGATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp ATTGTGGCTGTGGTGAAGCAGGCCCTGGTCTTGGCAGATGATACCAGAAGGGCATCAAGGCAGGAGGACTaGTTGAGCCCAGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: IVAVVKQALVLADDTRRASRQED*LSPGDQ
Trigger: CTGGTCTCCTGGGCTCAAGCAGTCCTCCTGCCTTGA...TGCCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTTCACCACAGCCACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp CCCCTCCAGGCTGGTAATCACTTGCTGGAGACTGCGCTGGAACCAAGGCTAACCTCACTTGCTGGAGACTaGGCTGGAACCAAGGCTAAC +
Preference number: 4 (lower is better)
Translates to: PLQAGNHLLETALEPRLTSLAGD*AGTKAN
Trigger: GTTAGCCTTGGTTCCAGCGCAGTCTCCAGCAAGTGA...GGTTAGCCTTGGTTCCAGCGCAGTCTCCAGCAAGTGATTACCAGCCTGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569189.2
CDS-3UTR CCA 90 bp AACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACAGCCAGGGCGCATGTGTaGGGCCATTGGGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: NEIWPPRCGTSPHSGSCTARAHV*GHWGQC
Trigger: ACACTGACCCCAATGGCCCCACACATGCGCCCTGGC...TGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS-3UTR CCA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGCAGCACCTGTACCTCTaGGTGCCCAGGGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: KILESTGHECQISSTHIMQHLYL*VPRGSR
Trigger: ACGGGAGCCCCTGGGCACCCAGAGGTACAGGTGCTG...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp GAATTTGCTTCTCCCCAGAGGAAAAGAAGCTCCTTCAGGGTGGTGCCTGGCTCAGAAGCTCCTTCAGGGTaGTGCCTGGCTCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: EFASPQRKRSSFRVVPGSEAPSG*CLAQGS
Trigger: GCTACCCTGAGCCAGGCACCACCCTGAAGGAGCTTC...TGAGCCAGGCACCACCCTGAAGGAGCTTCTTTTCCTCTGGGGAGAAGCAAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp CAGCTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTGTAAGAGCATGTAGGTaGAAAGGGGCAGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: QLLGLQSPPPSHLSQAQVVRACR*KGAGLW
Trigger: CCAGAGTCCTGCCCCTTTCCACCTACATGCTCTTAC...AACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp AGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGGCCAGGGCGCATGTGTaGGGCTTACCCATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RKRNLATSLWNFSPQWFMARAHV*GLPIGV
Trigger: GACCCCAATGGGTAAGCCCCACACATGCGCCCTGGC...CATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR TCA 90 bp GGGTCAACAGGACCCCCGAAGAGTTCAAGATACTGGAAAGCACTGGCCATGAGTCTTCCTCCACCGCACTaGCCCTCTTGGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: GSTGPPKSSRYWKALAMSLPPPH*PSWTPS
Trigger: AGAAGGTGTCCAAGAGGGTCAGTGCGGTGGAGGAAG...ACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTCGGGGGTCCTGTTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp CAGCTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTAGAGCTTCCTTCTCTTaGGGAGACTGGATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: QLLGLQSPPPSHLSQAQVRASFS*GDWILW
Trigger: CCACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCT...AACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGCTCTCATACACGACCTaGAGGGCCTCCTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: KILESTGHECQISSTHIMLSYTT*RASWSG
Trigger: GCCCGACCAGGAGGCCCTGCAGGTCGTGTATGAGAG...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp GGAGGTGGCAGCTTGAGAGAGGTCTACAACCCACCTAATGGTTTAGAGCCACCTCAGGCTGGGGAGCCGTaGTCATCATGGTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GGGSLREVYNPPNGLEPPQAGEP*SSWSRA
Trigger: TGCTCTTGACCATGATGAGCACGGCTCCCCAGCCTG...AGGTGGCTCTAAACCATTAGGTGGGTTGTAGACCTCTCTCAAGCTGCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp CAGCTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTCTCTCCTGTCCAGCTTaGCTCAGATCTTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QLLGLQSPPPSHLSQAQVLSCPA*LRSSGS
Trigger: AGAACCTGAAGATCTGAGGCAAGCTGGACAGGAGAG...AACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGGCCAGGGCGCATGTGTaGGGCCATTGGGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: KILESTGHECQISSTHIMARAHV*GHWGQC
Trigger: ACACTGACCCCAATGGCCCCACACATGCGCCCTGGC...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp CTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTCCTCAAGACAGCCAGGTCTaGGAAGTCTTTCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLGLQSPPPSHLSQAQVPQDSQV*EVFHFS
Trigger: GGAGAAGTGAAAGACTTCCCAGACCTGGCTGTCTTG...AGGAACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp GGGTCAACAGGACCCCCGAAGAGTTCAAGATACTGGAAAGCACTGGCCATGAGTCTTCAGGGTGGTGCCTaGCTCAGGGTAGCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GSTGPPKSSRYWKALAMSLQGGA*LRVAGQ
Trigger: TTGACCAGCTACCCTGAGCCAGGCACCACCCTGAAG...ACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTCGGGGGTCCTGTTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp ATTGTGGCTGTGGTGAAGCAGGCCCTGGTCTTGGCAGATGATACCAGAAGGGCAAGCAGGCCCTGGTCTTaGCAGATGATACCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: IVAVVKQALVLADDTRRASRPWS*QMIPEG
Trigger: CCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCT...TGCCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTTCACCACAGCCACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp CCCCTCCAGGCTGGTAATCACTTGCTGGAGACTGCGCTGGAACCAAGGCTAACCCTGGTAATCACTTGCTaGAGACTGCGCTGGAACCAA +
Preference number: 4 (lower is better)
Translates to: PLQAGNHLLETALEPRLTLVITC*RLRWNQ
Trigger: TTGGTTCCAGCGCAGTCTCCAGCAAGTGATTACCAG...GGTTAGCCTTGGTTCCAGCGCAGTCTCCAGCAAGTGATTACCAGCCTGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569189.2
CDS-3UTR CCA 90 bp TCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAAGGTGGAAAGCCAGTaGTCCCAGGCTCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SVRSGNEIWPPRCGTSPHKVESQ*SQAPLQ
Trigger: CTGGAGGGGAGCCTGGGACCACTGGCTTTCCACCTT...GTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569189.2
3UTR CAA 72 bp TTCAAAGGTAGAAACCCACCCAGCCAGTTCAGCTGCTaGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FKGRNPPSQFSC*DFKALRLAISA
Trigger: GGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTGAACTGGCTGGGTGGGTTTCTACCTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR CAA 72 bp GACTTTATTGTGGCTGTGGTGAAGCAGGCCCTGGTCTaGGCAGATGATACCAGAAGGGCACTGAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: DFIVAVVKQALV*ADDTRRALSAS
Trigger: GCTGGCACTCAGTGCCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTTCACCACAGCCACAATAAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp ATGGAGACAAGGTCTTTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCAACCGGTTTGCAGCCTaGAGGTCCTCGGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: METRSFLEESAQVDTLCPNRFAA*RSSGWL
Trigger: CAACCACCCCGAGGACCTTCAGGCTGCAAACCGGTT...GGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAAAGACCTTGTCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GGCCAAATGACATGCAACTACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCTCTGTTTCCAAAGGTaGCCCGGCCCTCCATCACCT +
Preference number: 4 (lower is better)
Translates to: GQMTCNYSADTDEAGIRDLCFQR*PGPPSP
Trigger: AGGTGATGGAGGGCCGGGTCACCTTTGGAAACAGAG...GTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp CTTAAGAGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCACATGGACCTGAGGCCTaGGTAAGGCCTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LKRQRKKSSHGGRSRNGSHGPEA*VRPGSC
Trigger: GCAGCTCCCAGGCCTTACTCAGGCCTCAGGTCCATG...TGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCTCTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GGAGGTGGCAGCTTGAGAGAGGTCTACAACCCACCTAATGGTTTAGAGCCACCTAAGGAGGTGGCAGCTTaGGAGAGGTCTACAACCCAC +
Preference number: 4 (lower is better)
Translates to: GGGSLREVYNPPNGLEPPKEVAA*ERSTTH
Trigger: GTGGGTTGTAGACCTCTCTCAAGCTGCCACCTCCTT...AGGTGGCTCTAAACCATTAGGTGGGTTGTAGACCTCTCTCAAGCTGCCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp GGAGGTGGCAGCTTGAGAGAGGTCTACAACCCACCTAATGGTTTAGAGCCACCTATACCAGAAGGGCACTaGGTGCCAGCGTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: GGGSLREVYNPPNGLEPPIPEGH*VPACNL
Trigger: CAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGTAT...AGGTGGCTCTAAACCATTAGGTGGGTTGTAGACCTCTCTCAAGCTGCCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp GGGTCAACAGGACCCCCGAAGAGTTCAAGATACTGGAAAGCACTGGCCATGAGTCCTGGTCTTGGCAGATaGTACCAGAAGGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: GSTGPPKSSRYWKALAMSPGLGR*YQKGTE
Trigger: CTCAGTGCCCTTCTGGTATCATCTGCCAAGACCAGG...ACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTCGGGGGTCCTGTTGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp GTGGTTCATGCACATCTCCAGCACTCACCGTTAAGGCATAAAGAGCTTCCTTCTTGGGTCTGTGGTCACTaGGCCACAGCTCCAGCGACG +
Preference number: 4 (lower is better)
Translates to: VVHAHLQHSPLRHKELPSWVCGH*ATAPAT
Trigger: CGTCGCTGGAGCTGTGGCTCAGTGACCACAGACCCA...AGAAGGAAGCTCTTTATGCCTTAACGGTGAGTGCTGGAGATGTGCATGAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS-3UTR GCA 90 bp TGTGTGGACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGGGGCCTGCCCTGGCCTaGGGTACATGCTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: CVDGKVLRIGLWKTITLKGPALA*GTCSAS
Trigger: AGATGCTGAGCATGTACCGCAGGCCAGGGCAGGCCC...CTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp TACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCAGCTGCTTTCCCCTCTaGCCAGGAACTCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: YSADTDEAGIRDPISLRCSCFPL*PGTLSR
Trigger: CCTGGACAGAGTTCCTGGGCAGAGGGGAAAGCAGCT...GCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGGCCCAGACTGGCTaGCCAACCCATGGACCTGAG +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQRAQTG*PTHGPE
Trigger: CTCAGGTCCATGGGTTGGGCAGCCAGTCTGGGCCCT...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp CAGTGGAACCTCCAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGCTGGGCGTGGCAGCATaGACCTGTAGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: QWNLQIQITPDRLKYDLALGVAA*TCSPSY
Trigger: GTAGCTGGGACTACAGGTGCATGCTGCCACGCCCAG...CGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTGGAGGTTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACAGCCGCTGTAGCGTCCTaGCGCTCTCCTCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: QETSLGNTEIQSLRKTATAAVAS*RSPLLT
Trigger: AGTCAGCAGAGGAGAGCGCCAGGACGCTACAGCGGC...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACATTGGCCACCTCGCTGTaGAACTTCTCCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: QFVQETKFGHLAVELLPTLATSL*NFSPQW
Trigger: CCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAA...TGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp GATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCTTGGCCACCTCGCTGTaGAACTTCTCCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: DQFVQETKFGHLAVELLPLATSL*NFSPQW
Trigger: CCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAA...GGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp ACGGAGGTAGGTCACGAAATGGGTCAACAGGACCCCCGAAGAGTTCAAGATACTTTGGCCACCTCGCTGTaGAACTTCTCCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: TEVGHEMGQQDPRRVQDTLATSL*NFSPQW
Trigger: CCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAA...AGTATCTTGAACTCTTCGGGGGTCCTGTTGACCCATTTCGTGACCTACCTCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp TTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACATCTCCAGCGGACCCCAGGTACTTTaGGGACAACACTTTGATCAG +
Preference number: 4 (lower is better)
Translates to: LATSLWNFSPQWFMHISSGPQVL*GQHFDQ
Trigger: CTGATCAAAGTGTTGTCCCCAAAGTACCTGGGGTCC...GCTGGAGATGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp ATTGTGGCTGTGGTGAAGCAGGCCCTGGTCTTGGCAGATGATACCAGAAGGGCAGTAAGAGCATGTAGGTaGAAAGGGGCAGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: IVAVVKQALVLADDTRRAVRACR*KGAGLW
Trigger: CCAGAGTCCTGCCCCTTTCCACCTACATGCTCTTAC...TGCCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTTCACCACAGCCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp CTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTCCTGCTGTTACTCAGAATTaGGACAGAGGCATTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LLGLQSPPPSHLSQAQVPAVTQN*DRGIVP
Trigger: TGGGACAATGCCTCTGTCCCAATTCTGAGTAACAGC...AGGAACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CAGATAACCCCTGACAGACTGAAATACGATCTGGCGACAGCAAGGAGGTGGCAGAGCAGGCCCTGGTCTTaGCAGATGATACCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QITPDRLKYDLATARRWQSRPWS*QMIPEG
Trigger: CCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCT...CTGCCACCTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp CGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTGTGGGGCTTACCCATTaGGGTCAGTGTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: RSGNEIWPPRCGTSPHSGVGLTH*GQCSPA
Trigger: AGCAGGTGAACACTGACCCCAATGGGTAAGCCCCAC...ACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR TCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGTCTGCAGAAGGGTTCTaGACACCACCGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQSAEGF*TPPPGS
Trigger: GCTGCCAGGCGGTGGTGTTCAGAACCCTTCTGCAGA...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGCGGAGCTGGCTGTGCTaGGAGGAGGTCCAGCAAATT +
Preference number: 4 (lower is better)
Translates to: KILESTGHECQISSTHIMRSWLC*EEVQQI
Trigger: AATTTGCTGGACCTCCTCTCAGCACAGCCAGCTCCG...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GGGTCAACAGGACCCCCGAAGAGTTCAAGATACTGGAAAGCACTGGCCATGAGTCTTCTCCTACTTCGCTaGAAGGCTGTCCACCTTGGT +
Preference number: 4 (lower is better)
Translates to: GSTGPPKSSRYWKALAMSLLLLR*KAVHLG
Trigger: ACCAAGGTGGACAGCCTTTCAGCGAAGTAGGAGAAG...ACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTCGGGGGTCCTGTTGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp CTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTCCTAAGGCACAGAGTGGATaGATGGAACGAACGATACAT +
Preference number: 4 (lower is better)
Translates to: LLGLQSPPPSHLSQAQVPKAQSG*MERTIH
Trigger: ATGTATCGTTCGTTCCATTCATCCACTCTGTGCCTT...AGGAACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGACCCCCGAAAGCCTTTCAAAGGCTaGCAAGGCACAGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: GKRAVTEVGHEMGQQDPRKPFKG*QGTEWM
Trigger: CATCCACTCTGTGCCTTGTCAGCCTTTGAAAGGCTT...TCGGGGGTCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GGCCAAATGACATGCAACTACTCTGCGGATACAGACGAAGCAGGAATCAGGGACAAGGAGGTGGCAGCTTaGGAGAGGTCTACAACCCAC +
Preference number: 4 (lower is better)
Translates to: GQMTCNYSADTDEAGIRDKEVAA*ERSTTH
Trigger: GTGGGTTGTAGACCTCTCTCAAGCTGCCACCTCCTT...GTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp TTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACATCTCCAGCAATCCTGTTCCGACATaGTTGGGTCTGTGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LATSLWNFSPQWFMHISSNPVPT*LGLWLC
Trigger: ACAAAGCCACAGACCCAAGCATGTCGGAACAGGATT...GCTGGAGATGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR GCA 90 bp GAGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGCTGGCCTGCGGTACATaGTCAGCATCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ENSGSGKNQSCYSELGQRLACGT*SASPAA
Trigger: TGCTGCAGGAGATGCTGAGCATGTACCGCAGGCCAG...CCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp CTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAAAGAGCACCTGTACCTCTGGGTaGCCAGGGGCTCCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: LRIGLWKTITLKRQRKKSTCTSG*PGAPVW
Trigger: CCAGACGGGAGCCCCTGGGCACCCAGAGGTACAGGT...GCTCTTTTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp TGTGTGGACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGTTCAGGACAGCAGCCTaGCTCCTCTCCTCCTACCCC +
Preference number: 4 (lower is better)
Translates to: CVDGKVLRIGLWKTITLKFRTAA*LLSSYP
Trigger: GGGGTAGGAGGAGAGGAGGCAGGCTGCTGTCCTGAA...CTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp GGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGACCCCCGAAGGCGTGAGCCACTGTaGACAGCCAATAACTACTTG +
Preference number: 4 (lower is better)
Translates to: GKRAVTEVGHEMGQQDPRRREPL*TANNYL
Trigger: CAAGTAGTTATTGGCTGTGCACAGTGGCTCACGCCT...TCGGGGGTCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp CAGCTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTACAGGCCAAATGACATaGAACTACTCTGCGGATACA +
Preference number: 4 (lower is better)
Translates to: QLLGLQSPPPSHLSQAQVTGQMT*NYSADT
Trigger: TGTATCCGCAGAGTAGTTGCATGTCATTTGGCCTGT...AACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp ATTGTGGCTGTGGTGAAGCAGGCCCTGGTCTTGGCAGATGATACCAGAAGGGCACAGTGGCAATGTAAGTaGAGGGAGGACATGATGTGG +
Preference number: 4 (lower is better)
Translates to: IVAVVKQALVLADDTRRAQWQCK*REDMMW
Trigger: CCACATCATGTCCTCCCTGCACTTACATTGCCACTG...TGCCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTTCACCACAGCCACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp GGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGACCCCCGACTGTTCCGACATGCTTaGGTCTGTGGCTTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: GKRAVTEVGHEMGQQDPRLFRHA*VCGFVE
Trigger: CTCAACAAAGCCACAGACCCAAGCATGTCGGAACAG...TCGGGGGTCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp TCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACCATGTGTGGGGCCATTaGGGTCAGTGTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: SVRSGNEIWPPRCGTSPHHVWGH*GQCSPA
Trigger: AGCAGGTGAACACTGACCCCAATGGCCCCACACATG...GTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS-3UTR CCA 90 bp GCCTGCCTCCTCTCCTCCTACCCCTATCCTGTCCAACACCTAAGCATAGTAGTACATCATCGTCATCAGTaGTGTCACTCGCCAACCGGA +
Preference number: 4 (lower is better)
Translates to: ACLLSSYPYPVQHLSIVVHHRHQ*CHSPTG
Trigger: TCCGGTTGGCGAGTGACACCACTGATGACGATGATG...TACTACTATGCTTAGGTGTTGGACAGGATAGGGGTAGGAGGAGAGGAGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGACAGCAAGGAGGCGCCTGGCAGCGTGCTaGAGGAGGGATTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QIQITPDRLKYDLATARRRLAAC*RRDSSF
Trigger: AAAAGAGGAATCCCTCCTCCAGCACGCTGCCAGGCG...CCTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp ATGGAGACAAGGTCTTTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCCAGGAAGCTTGGAGCTaGATGCCGGCTGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: METRSFLEESAQVDTLCPQEAWS*MPAAAS
Trigger: TGAAGCTGCAGCCGGCATCCAGCTCCAAGCTTCCTG...GGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAAAGACCTTGTCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp GAATTTGCTTCTCCCCAGAGGAAAAGAAGCTCCTTCAGGGTGGTGCCTGGCTCAGAGCTGGGCTCTAAGTaGCCACTGGACTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: EFASPQRKRSSFRVVPGSELGSK*PLDLLI
Trigger: AATCAGCAAGTCCAGTGGCCACTTAGAGCCCAGCTC...TGAGCCAGGCACCACCCTGAAGGAGCTTCTTTTCCTCTGGGGAGAAGCAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp CTTAAGAGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAGAAGCTCCTTCAGGGTaGTGCCTGGCTCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LKRQRKKSSHGGRSRNGSEAPSG*CLAQGS
Trigger: GCTACCCTGAGCCAGGCACCACCCTGAAGGAGCTTC...TGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCTCTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp GTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGTGGGGCTTACCCATTaGGGTCAGTGTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: VRSGNEIWPPRCGTSPHSVGLTH*GQCSPA
Trigger: AGCAGGTGAACACTGACCCCAATGGGTAAGCCCCAC...ACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp GATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCGTGGGGCTTACCCATTaGGGTCAGTGTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: DQFVQETKFGHLAVELLPVGLTH*GQCSPA
Trigger: AGCAGGTGAACACTGACCCCAATGGGTAAGCCCCAC...GGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp TTTGGGGACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGGCCAGGGCGCATGTGTaGGGCTTACCCATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: FGDNTLISSFRKRNLATSARAHV*GLPIGV
Trigger: GACCCCAATGGGTAAGCCCCACACATGCGCCCTGGC...CGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp AAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACACATGCTTGGGTCTGTaGTCACTGAGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: KRNLATSLWNFSPQWFMHTCLGL*SLSHSS
Trigger: GGAGCTGTGGCTCAGTGACCACAGACCCAAGCATGT...GTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS-3UTR TCA 90 bp GGCCAAATGACATGCAACTACTCTGCGGATACAGACGAAGCAGGAATCAGGGACAGGGATGTCTCCCAATaGGCTGGTCACTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GQMTCNYSADTDEAGIRDRDVSQ*AGHSVS
Trigger: GGAAACAGAGTGACCAGCTCATTGGGAGACATCCCT...GTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GGCCAAATGACATGCAACTACTCTGCGGATACAGACGAAGCAGGAATCAGGGACTCAAGCAGCAGCATCTaGGATATCACAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQMTCNYSADTDEAGIRDSSSSI*DITAGG
Trigger: GCCTCCAGCTGTGATATCTCAGATGCTGCTGCTTGA...GTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp ATTGTGGCTGTGGTGAAGCAGGCCCTGGTCTTGGCAGATGATACCAGAAGGGCACTGATTAGAAGGGAGTaGTGCCATAAACCACAGCCA +
Preference number: 4 (lower is better)
Translates to: IVAVVKQALVLADDTRRALIRRE*CHKPQP
Trigger: TGGCTGTGGTTTATGGCATCACTCCCTTCTAATCAG...TGCCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTTCACCACAGCCACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp CAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGACAGCAAGGAGGGGCCACTGGACTTGCTaGTTAGAAGGGAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: QIQITPDRLKYDLATARRGHWTC*LEGSDA
Trigger: GGCATCACTCCCTTCTAATCAGCAAGTCCAGTGGCC...CCTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGGGAAAGCACTGGCCATaGGTGCCAGATCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQGKHWP*VPDLQH
Trigger: GTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCC...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp TGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCTTTCATGGTTTAGAGCCACCTaGCTACCAGGCCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CGYRRSRNQGPNKSQVLSWFRAT*LPGLCV
Trigger: CACACACAGGCCTGGTAGTCAGGTGGCTCTAAACCA...TGAAAGCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp CAGCTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTGATACAGATAACCCCTaGCAGACTGAAATACGATCT +
Preference number: 4 (lower is better)
Translates to: QLLGLQSPPPSHLSQAQVDTDNP*QTEIRS
Trigger: AGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATC...AACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp CAGTGGAACCTCCAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGATACCAGAAGGGCACTaGGTGCCAGCGTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: QWNLQIQITPDRLKYDLAIPEGH*VPACNL
Trigger: CAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGTAT...CGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTGGAGGTTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGCCTGGTCTTGGCAGATaGTACCAGAAGGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: KILESTGHECQISSTHIMPGLGR*YQKGTE
Trigger: CTCAGTGCCCTTCTGGTATCATCTGCCAAGACCAGG...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp CGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACATCAGAGCTTCCTTCTCTTaGGGAGACTGGATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RNLATSLWNFSPQWFMHIRASFS*GDWILW
Trigger: CCACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCT...GATGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR GCA 90 bp GGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGACCCCCGAGGTCTTCATGCAGCCTaGTGGATTCTGAAAGACTCT +
Preference number: 4 (lower is better)
Translates to: GKRAVTEVGHEMGQQDPRGLHAA*WILKDS
Trigger: AGAGTCTTTCAGAATCCAGCAGGCTGCATGAAGACC...TCGGGGGTCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp CAGTGGAACCTCCAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGGAGCTGGATGCCGGCTaGAGCTTCACTCTCATTGAC +
Preference number: 4 (lower is better)
Translates to: QWNLQIQITPDRLKYDLAELDAG*SFTLID
Trigger: GTCAATGAGAGTGAAGCTGCAGCCGGCATCCAGCTC...CGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTGGAGGTTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp AGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGCCCCAGCCAGTTCAGCTaGTTGGACTTCAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RTLVVARTRAVTQNWDRGPSQFS*LDFKAL
Trigger: GAGGGCTTTGAAGTCCAAGCAGCTGAACTGGCTGGG...GCCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp GGAGGTGGCAGCTTGAGAGAGGTCTACAACCCACCTAATGGTTTAGAGCCACCTAGGCGTGAGCCACTGTaGACAGCCAATAACTACTTG +
Preference number: 4 (lower is better)
Translates to: GGGSLREVYNPPNGLEPPRREPL*TANNYL
Trigger: CAAGTAGTTATTGGCTGTGCACAGTGGCTCACGCCT...AGGTGGCTCTAAACCATTAGGTGGGTTGTAGACCTCTCTCAAGCTGCCACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp CTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAAAGAGCGCTCCTTCAGGGTGGTaGCTGGCTCAGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LRIGLWKTITLKRQRKKSAPSGW*LAQGSW
Trigger: CCAGCTACCCTGAGCCAGGCACCACCCTGAAGGAGC...GCTCTTTTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp CGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTAATCCTGTTCCGACATaGTTGGGTCTGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: RSGNEIWPPRCGTSPHSGNPVPT*LGLWSL
Trigger: CAGTGACCACAGACCCAAGCATGTCGGAACAGGATT...ACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS-3UTR CCA 90 bp GGGTCAACAGGACCCCCGAAGAGTTCAAGATACTGGAAAGCACTGGCCATGAGTGGACCCCAGGTACTTTaGGGACAACACTTTGATCAG +
Preference number: 4 (lower is better)
Translates to: GSTGPPKSSRYWKALAMSGPQVL*GQHFDQ
Trigger: CTGATCAAAGTGTTGTCCCCAAAGTACCTGGGGTCC...ACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTCGGGGGTCCTGTTGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp GGGTCAACAGGACCCCCGAAGAGTTCAAGATACTGGAAAGCACTGGCCATGAGTTACAGCAGAACTCCTTaGGTGAGGAGGTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: GSTGPPKSSRYWKALAMSYSRTP*VRRSFA
Trigger: GGCAAATGACCTCCTCACCCAAGGAGTTCTGCTGTA...ACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTCGGGGGTCCTGTTGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp GGAGGTGGCAGCTTGAGAGAGGTCTACAACCCACCTAATGGTTTAGAGCCACCTCTGATGAAGCAAAGATaGCACCACAGTCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: GGGSLREVYNPPNGLEPPLMKQR*HHSPHL
Trigger: CAGATGGGGACTGTGGTGCCATCTTTGCTTCATCAG...AGGTGGCTCTAAACCATTAGGTGGGTTGTAGACCTCTCTCAAGCTGCCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGCCAGGGGCTCCCGTCTaGGAGAAGTGGAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQPGAPV*EKWSRI
Trigger: AATTCTGCTCCACTTCTCCCAGACGGGAGCCCCTGG...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp TACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCGAGCCGTGCTCATCATaGTCAAGAGCAGCACCTGTA +
Preference number: 4 (lower is better)
Translates to: YSADTDEAGIRDPISLRCEPCSS*SRAAPV
Trigger: TACAGGTGCTGCTCTTGACCATGATGAGCACGGCTC...GCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp TTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCAAGACTAACCAGGTCTTGGTCCCCCAAGTGTaGTCCTCAGGTCTCATGGCA +
Preference number: 4 (lower is better)
Translates to: FLEESAQVDTLCPKTNQVLVPQV*SSGLMA
Trigger: TGCCATGAGACCTGAGGACCACACTTGGGGGACCAA...GACCTGGTTAGTCTTGGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CTTAAGAGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAGCCAGTTCAGCTGCTTaGACTTCAAAGCCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LKRQRKKSSHGGRSRNGSASSAA*TSKPSA
Trigger: GGCGGAGGGCTTTGAAGTCCAAGCAGCTGAACTGGC...TGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCTCTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACAGAGCATCTGCAGAATAAGTCAGAGGCTTCAGGGTGGTGCCTaGCTCAGGGTAGCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTQSICRISQRLQGGA*LRVAGQ
Trigger: TTGACCAGCTACCCTGAGCCAGGCACCACCCTGAAG...CCTCTGACTTATTCTGCAGATGCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGACAGCAAGGAGGGCGACAGCAAGGAGGTaGCAGCTTGAGAGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: QIQITPDRLKYDLATARRATARR*QLERGL
Trigger: TAGACCTCTCTCAAGCTGCCACCTCCTTGCTGTCGC...CCTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGGCGACAGCAAGGAGGTaGCAGCTTGAGAGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: KILESTGHECQISSTHIMATARR*QLERGL
Trigger: TAGACCTCTCTCAAGCTGCCACCTCCTTGCTGTCGC...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp ACCAGAAGGGCACTGAGTGCCAGCGTGCAACTTGAATTTGATCCCATAAAGTCACAGCCTGCTGGATTCTaGAAGACTCTGGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: TRRALSASVQLEFDPIKSQPAGF*KTLETG
Trigger: CCCTGTCTCCAGAGTCTTTCAGAATCCAGCAGGCTG...TGACTTTATGGGATCAAATTCAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp ATGGAGACAAGGTCTTTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCCTTGGCACTCCGCACTaGAACACCGTGATTAGTCCT +
Preference number: 4 (lower is better)
Translates to: METRSFLEESAQVDTLCPLGTPH*NTVISP
Trigger: AGGACTAATCACGGTGTTTCAGTGCGGAGTGCCAAG...GGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAAAGACCTTGTCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp CAGCTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTGTGAATTATGGCAAATaGAATCACCCCACTGTTTAC +
Preference number: 4 (lower is better)
Translates to: QLLGLQSPPPSHLSQAQVVNYGK*NHPTVY
Trigger: GTAAACAGTGGGGTGATTTCATTTGCCATAATTCAC...AACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp TTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCAGAGCTTCCTTCTCTTaGGGAGACTGGATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: FRKRNLATSLWNFSPQWFRASFS*GDWILW
Trigger: CCACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCT...GAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR GCA 90 bp TACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCACTGATTCCCAAGGCTaGCAGGTCCTGATGAAGCAA +
Preference number: 4 (lower is better)
Translates to: YSADTDEAGIRDPISLRCTDSQG*QVLMKQ
Trigger: TTGCTTCATCAGGACCTGGCAGCCTTGGGAATCAGT...GCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAAGCTTGGAGCTGGATaGCGGCTGCAGCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQKLGAG*RLQLHS
Trigger: AGAGTGAAGCTGCAGCCGGCATCCAGCTCCAAGCTT...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp CAGTGGAACCTCCAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGTGTGAAAAGTTAGGCTaGGCCCAAGACAGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QWNLQIQITPDRLKYDLACEKLG*AQDSQV
Trigger: GACCTGGCTGTCTTGGGCGCAGCCTAACTTTTCACA...CGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTGGAGGTTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp TGTGTGGACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGATATCCCAAGCCCTGTaGTACCACCCTCTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: CVDGKVLRIGLWKTITLKISQAL*YHPLPE
Trigger: TTCGGGGAGAGGGTGGTAGCACAGGGCTTGGGATAT...CTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp TGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCTTTCATCGCATTTCCCACACTaGCGATATCCCAAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CGYRRSRNQGPNKSQVLSSHFPH*RYPKPC
Trigger: ACAGGGCTTGGGATATCGGCAGTGTGGGAAATGCGA...TGAAAGCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp GAATTTGCTTCTCCCCAGAGGAAAAGAAGCTCCTTCAGGGTGGTGCCTGGCTCACAAGTAGATACTCTCTaGCCCAAGACTAACCAGGTC +
Preference number: 4 (lower is better)
Translates to: EFASPQRKRSSFRVVPGSQVDTL*PKTNQV
Trigger: GACCTGGTTAGTCTTGGGGCAGAGAGTATCTACTTG...TGAGCCAGGCACCACCCTGAAGGAGCTTCTTTTCCTCTGGGGAGAAGCAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACAGAGCATCTGCAGAATAAGTCAGAGGAGCACTGGCCATGAGTaGCAGATCTCCAGCACACAC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTQSICRISQRSTGHE*QISSTH
Trigger: GTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCT...CCTCTGACTTATTCTGCAGATGCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp AGGCTAACCCTGCCTCAAGCCTATGAGGACACGTTAAGGCATAAAGAGCTTCCTAGGCTGGTAATCACTTaGTGGAGACTGCGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RLTLPQAYEDTLRHKELPRLVIT*WRLRWN
Trigger: GTTCCAGCGCAGTCTCCAGCAAGTGATTACCAGCCT...AGGAAGCTCTTTATGCCTTAACGTGTCCTCATAGGCTTGAGGCAGGGTTAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569189.2
CDS-3UTR CCA 90 bp AAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACCTGTTCCGACATGCTTaGGTCTGTGGCTTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: KRNLATSLWNFSPQWFMHLFRHA*VCGFVE
Trigger: CTCAACAAAGCCACAGACCCAAGCATGTCGGAACAG...GTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp TACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCCTGTTCCGACATGCTTaGGTCTGTGGCTTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: YSADTDEAGIRDPISLRCLFRHA*VCGFVE
Trigger: CTCAACAAAGCCACAGACCCAAGCATGTCGGAACAG...GCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp ACCAGAAGGGCACTGAGTGCCAGCGTGCAACTTGAATTTGATCCCATAAAGTCACATGTGTGGGGCCATTaGGGTCAGTGTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: TRRALSASVQLEFDPIKSHVWGH*GQCSPA
Trigger: AGCAGGTGAACACTGACCCCAATGGCCCCACACATG...TGACTTTATGGGATCAAATTCAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp AACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTGGCCACCTCGCTGTaGAACTTCTCCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: NTLISSFRKRNLATSLWNLATSL*NFSPQW
Trigger: CCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAA...GTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp AAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACATCTCGGACCCCAGGTACTTTaGGGACAACACTTTGATCAG +
Preference number: 4 (lower is better)
Translates to: KFGHLAVELLPTVVHAHLGPQVL*GQHFDQ
Trigger: CTGATCAAAGTGTTGTCCCCAAAGTACCTGGGGTCC...GAGATGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp GGCCAAATGACATGCAACTACTCTGCGGATACAGACGAAGCAGGAATCAGGGACAGGAGGTCATTTGCCTaGAGAATTTCCGCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: GQMTCNYSADTDEAGIRDRRSFA*RISASA
Trigger: TGCACTCGCGGAAATTCTCCAGGCAAATGACCTCCT...GTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp GACCCAATAAGTCTCAGGTGCTTTCAAGTAAGAGCATGTAGGTGGAAAGGGGCAATATCCCAGACAGGCTaGGGAGCCGTGCTCATCATG +
Preference number: 4 (lower is better)
Translates to: DPISLRCFQVRACRWKGAISQTG*GAVLIM
Trigger: CATGATGAGCACGGCTCCCCAGCCTGTCTGGGATAT...TGCCCCTTTCCACCTACATGCTCTTACTTGAAAGCACCTGAGACTTATTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CAGTGGAACCTCCAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGCTGAGAACAGCAGCCTaGGAGCAACCAAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: QWNLQIQITPDRLKYDLALRTAA*EQPSLS
Trigger: TGAAAGGCTTGGTTGCTCCCAGGCTGCTGTTCTCAG...CGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTGGAGGTTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CTTAAGAGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCATGGCAGCCACTCGCCTaGGAACAGTGCAACAAGCAT +
Preference number: 4 (lower is better)
Translates to: LKRQRKKSSHGGRSRNGSWQPLA*EQCNKH
Trigger: ATGCTTGTTGCACTGTTCCCAGGCGAGTGGCTGCCA...TGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCTCTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp AGCCATCTCAGCCAGGCTCAGGTTCCTTCTCCCACCCATCAGGCCAAGCAGGACGTCTTATGTGAATTATaGCAAATGAAATCACCCCAC +
Preference number: 4 (lower is better)
Translates to: SHLSQAQVPSPTHQAKQDVLCEL*QMKSPH
Trigger: GTGGGGTGATTTCATTTGCCATAATTCACATAAGAC...GTCCTGCTTGGCCTGATGGGTGGGAGAAGGAACCTGAGCCTGGCTGAGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp GAATTTGCTTCTCCCCAGAGGAAAAGAAGCTCCTTCAGGGTGGTGCCTGGCTCAGCTGTTACTCAGAATTaGGACAGAGGCATTGTCCCA +
Preference number: 4 (lower is better)
Translates to: EFASPQRKRSSFRVVPGSAVTQN*DRGIVP
Trigger: TGGGACAATGCCTCTGTCCCAATTCTGAGTAACAGC...TGAGCCAGGCACCACCCTGAAGGAGCTTCTTTTCCTCTGGGGAGAAGCAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp AATTCCTTGTTTCTTCAGCATCTGATAAGCGTCTCGAATCTTGATGTCTTCCGGGCCAGGGCGCATGTGTaGGGCTTACCCATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: NSLFLQHLISVSNLDVFRARAHV*GLPIGV
Trigger: GACCCCAATGGGTAAGCCCCACACATGCGCCCTGGC...CCGGAAGACATCAAGATTCGAGACGCTTATCAGATGCTGAAGAAACAAGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570111.5
CDS-3UTR TCA 90 bp CGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACATCTTGGGGACAACACTTTaGTCAGTTCGTTCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: RNLATSLWNFSPQWFMHILGTTL*SVRSGN
Trigger: GTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAA...GATGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR TCA 90 bp GGCCAAATGACATGCAACTACTCTGCGGATACAGACGAAGCAGGAATCAGGGACAAGCGTCTCGAATCTTaGTGTCTTCCGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: GQMTCNYSADTDEAGIRDKRLES*CLPETR
Trigger: TCTGGTTTCCGGAAGACATCAAGATTCGAGACGCTT...GTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp TACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCAAGCGTCTCGAATCTTaGTGTCTTCCGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: YSADTDEAGIRDPISLRCKRLES*CLPETR
Trigger: TCTGGTTTCCGGAAGACATCAAGATTCGAGACGCTT...GCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp ACCAGAAGGGCACTGAGTGCCAGCGTGCAACTTGAATTTGATCCCATAAAGTCAGAGGCATCAAAGGACTaGATGCAGGAAGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TRRALSASVQLEFDPIKSEASKD*MQEAWS
Trigger: GCTCCAAGCTTCCTGCATTCAGTCCTTTGATGCCTC...TGACTTTATGGGATCAAATTCAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp TACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCCTCATTCACCCATTTTaGCCAAAACCCTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: YSADTDEAGIRDPISLRCLIHPF*PKPFRG
Trigger: CCCTCTGAAGGGTTTTGGTCAAAATGGGTGAATGAG...GCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp ATTGTGGCTGTGGTGAAGCAGGCCCTGGTCTTGGCAGATGATACCAGAAGGGCATCAGGTACACATGTGTaGGTTCACCTCCTAACTATA +
Preference number: 4 (lower is better)
Translates to: IVAVVKQALVLADDTRRASGTHV*VHLLTI
Trigger: TATAGTTAGGAGGTGAACTCACACATGTGTACCTGA...TGCCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTTCACCACAGCCACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GGCCAAATGACATGCAACTACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCTGATTAGAAGGGAGTaGTGCCATAAACCACAGCCA +
Preference number: 4 (lower is better)
Translates to: GQMTCNYSADTDEAGIRDLIRRE*CHKPQP
Trigger: TGGCTGTGGTTTATGGCATCACTCCCTTCTAATCAG...GTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp AGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGATGGACGGGAAAGTCCTaGGGATTGGACTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RQRKKSSHGGRSRNGSTGWTGKS*GLDSGK
Trigger: TTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCA...TCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGTGGACGGGAAAGTCCTaGGGATTGGACTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KILESTGHECQISSTHIMWTGKS*GLDSGK
Trigger: TTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCA...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp AGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGAATCCTGTTCCGACATaGTTGGGTCTGTGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SSFRKRNLATSLWNFSPQNPVPT*LGLWLC
Trigger: ACAAAGCCACAGACCCAAGCATGTCGGAACAGGATT...CTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR GCA 90 bp GGGGACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGAGAGCTTCCTTCTCTTaGGGAGACTGGATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GDNTLISSFRKRNLATSLRASFS*GDWILW
Trigger: CCACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCT...CAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR GCA 90 bp AGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGCAGAGCTTCCTTCTCTTaGGGAGACTGGATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RTLVVARTRAVTQNWDRGRASFS*GDWILW
Trigger: CCACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCT...GCCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGGGTCCTCGGGGTGGTTaGTCTTTAGAAGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQGPRGG*SLEALS
Trigger: TGACAAGGCTTCTAAAGAGCAACCACCCCGAGGACC...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACAGGTGAGGAGGTCATTTaGCTGGAGAATTTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: QETSLGNTEIQSLRKTATGEEVI*LENFRE
Trigger: CTCGCGGAAATTCTCCAGGCAAATGACCTCCTCACC...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp CAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGACAGCAAGGAGGGACATGCAACTACTCTaGGGATACAGACGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: QIQITPDRLKYDLATARRDMQLL*GYRRSR
Trigger: CCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTC...CCTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGCAGTGGCAATGTAAGTaGAGGGAGGACATGATGTGG +
Preference number: 4 (lower is better)
Translates to: KILESTGHECQISSTHIMQWQCK*REDMMW
Trigger: CCACATCATGTCCTCCCTGCACTTACATTGCCACTG...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp ATCTTGATGTCTTCCGGAAACCAGACTGTCCAACTGAAGAGTATTTCAATGACTGCCGCTGTAGCGTCCTaGCGCTCTCCTCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: ILMSSGNQTVQLKSISMTAAVAS*RSPLLT
Trigger: AGTCAGCAGAGGAGAGCGCCAGGACGCTACAGCGGC...AGTCATTGAAATACTCTTCAGTTGGACAGTCTGGTTTCCGGAAGACATCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563494.5
CDS-3UTR CCA 90 bp CTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAAAGAGCTTGGCCACCTCGCTGTaGAACTTCTCCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: LRIGLWKTITLKRQRKKSLATSL*NFSPQW
Trigger: CCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAA...GCTCTTTTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp TCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACTCAGGAAACGAAATTTaGCCACCTCGCTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: SVRSGNEIWPPRCGTSPHSGNEI*PPRCGT
Trigger: AGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGA...GTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp TACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCTCAGGAAACGAAATTTaGCCACCTCGCTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: YSADTDEAGIRDPISLRCSGNEI*PPRCGT
Trigger: AGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGA...GCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp GTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTTCAGGAAACGAAATTTaGCCACCTCGCTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: VRSGNEIWPPRCGTSPHSSGNEI*PPRCGT
Trigger: AGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGA...ACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp AAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAACCAACCGGAACAGCGTaGGCCGCAGCTTTTCACACC +
Preference number: 4 (lower is better)
Translates to: KVLRIGLWKTITLKRQRKPTGTA*AAAFHT
Trigger: GGTGTGAAAAGCTGCGGCCCACGCTGTTCCGGTTGG...TTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACAAGAGGACTTAGTACCTaGTGGCACTTCCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QETSLGNTEIQSLRKTATRGLST*WHFLGD
Trigger: GTCCCCAAGGAAGTGCCACCAGGTACTAAGTCCTCT...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp GAGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGCCCGTCTGGGAGAAGTaGAGCAGAATTCTGAATCCA +
Preference number: 4 (lower is better)
Translates to: ENSGSGKNQSCYSELGQRPVWEK*SRILNP
Trigger: TGGATTCAGAATTCTGCTCCACTTCTCCCAGACGGG...CCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CTTAAGAGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAGGTGAAGGACATGATTaGTCCCCCAAGTGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LKRQRKKSSHGGRSRNGSGEGHD*SPKCGP
Trigger: AGGACCACACTTGGGGGACCAATCATGTCCTTCACC...TGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCTCTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGCTGGACTTGAAATCCTaGGCTCAAGCGGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQLDLKS*AQAVIP
Trigger: TGGGATGACCGCTTGAGCCCAGGATTTCAAGTCCAG...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp TGTGTGGACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGCTGGACTTGAAATCCTaGGCTCAAGCGGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: CVDGKVLRIGLWKTITLKLDLKS*AQAVIP
Trigger: TGGGATGACCGCTTGAGCCCAGGATTTCAAGTCCAG...CTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp ATTGTGGCTGTGGTGAAGCAGGCCCTGGTCTTGGCAGATGATACCAGAAGGGCACTGAGGATTGGACTCTaGAAAACCATCACACTTAAG +
Preference number: 4 (lower is better)
Translates to: IVAVVKQALVLADDTRRALRIGL*KTITLK
Trigger: CTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG...TGCCCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTTCACCACAGCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp GGGTCAACAGGACCCCCGAAGAGTTCAAGATACTGGAAAGCACTGGCCATGAGTGAAAGTCCTGAGGATTaGACTCTGGAAAACCATCAC +
Preference number: 4 (lower is better)
Translates to: GSTGPPKSSRYWKALAMSESPED*TLENHH
Trigger: GTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTC...ACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTCGGGGGTCCTGTTGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR CAA 72 bp CATGAGTGCCAGATCTCCAGCACACACATCATGAATTaGCTTCTCCCCAGAGGAAAAGAAGCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: HECQISSTHIMN*LLPRGKEAPSG
Trigger: CCCTGAAGGAGCTTCTTTTCCTCTGGGGAGAAGCAAATTCATGATGTGTGTGCTGGAGATCTGGCACTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR CAA 72 bp GACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTaGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: DNTLISSFRKRN*ATSLWNFSPQW
Trigger: CCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR TCA 90 bp AGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGGAAATTCTGGATAGCTaGCCAATCCTGTTCCGACAT +
Preference number: 4 (lower is better)
Translates to: SSFRKRNLATSLWNFSPQEILDS*PILFRH
Trigger: ATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTC...CTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR TCA 90 bp GTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTTTGGGGACAACACTTTaGTCAGTTCGTTCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: VRSGNEIWPPRCGTSPHSLGTTL*SVRSGN
Trigger: GTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAA...ACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR TCA 90 bp GGCCAAATGACATGCAACTACTCTGCGGATACAGACGAAGCAGGAATCAGGGACAAAGGGACAAACACTTaGGCCAGAGGTGTATTCTGT +
Preference number: 4 (lower is better)
Translates to: GQMTCNYSADTDEAGIRDKGTNT*ARGVFC
Trigger: ACAGAATACACCTCTGGCTCAAGTGTTTGTCCCTTT...GTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GGCCAAATGACATGCAACTACTCTGCGGATACAGACGAAGCAGGAATCAGGGACTTTGGCACAGCCACTTaGAACATGATATCCCAGACA +
Preference number: 4 (lower is better)
Translates to: GQMTCNYSADTDEAGIRDFGTAT*NMISQT
Trigger: TGTCTGGGATATCATGTTTCAAGTGGCTGTGCCAAA...GTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp TGTGTGGACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGGCTGTCCACCTTGGTTaGATGTCAGCTTGTACCGTA +
Preference number: 4 (lower is better)
Translates to: CVDGKVLRIGLWKTITLKAVHLG*MSACTV
Trigger: TACGGTACAAGCTGACATTCAACCAAGGTGGACAGC...CTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp CTTAAGAGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCACGCACTGAAACACCGTaGTTAGTCCTGACTAGACAG +
Preference number: 4 (lower is better)
Translates to: LKRQRKKSSHGGRSRNGSRTETP*LVLTRQ
Trigger: CTGTCTAGTCAGGACTAATCACGGTGTTTCAGTGCG...TGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCTCTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACAGAGCATCTGCAGAATAAGTCAGAGGCCAGCACACACATCATaGATTTGCTTCTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTQSICRISQRPAHTS*ICFSPE
Trigger: CTCTGGGGAGAAGCAAATTCATGATGTGTGTGCTGG...CCTCTGACTTATTCTGCAGATGCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp ACCAGAAGGGCACTGAGTGCCAGCGTGCAACTTGAATTTGATCCCATAAAGTCACCAGCACACACATCATaGATTTGCTTCTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TRRALSASVQLEFDPIKSPAHTS*ICFSPE
Trigger: CTCTGGGGAGAAGCAAATTCATGATGTGTGTGCTGG...TGACTTTATGGGATCAAATTCAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp AGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGAAATCCTGTTCCGACATaGTTGGGTCTGTGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: RQRKKSSHGGRSRNGSTGNPVPT*LGLWLC
Trigger: ACAAAGCCACAGACCCAAGCATGTCGGAACAGGATT...TCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp TACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCGGGTCAGTGTTCACCTaGTCACAGAAATTCTGGATA +
Preference number: 4 (lower is better)
Translates to: YSADTDEAGIRDPISLRCGSVFT*SQKFWI
Trigger: TATCCAGAATTTCTGTGAGCAGGTGAACACTGACCC...GCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp AGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGAGAGAATTTCCGCGAGTaGATCATCGTCATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RQRKKSSHGGRSRNGSTGENFRE*IIVISG
Trigger: ACCACTGATGACGATGATGCACTCGCGGAAATTCTC...TCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp TTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCAAGACTAACCAGGTCTGTCGCTCGCTGACATaGAGAAACATGACTGTAGCA +
Preference number: 4 (lower is better)
Translates to: FLEESAQVDTLCPKTNQVCRSLT*RNMTVA
Trigger: TGCTACAGTCATGTTTCTGCATGTCAGCGAGCGACA...GACCTGGTTAGTCTTGGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp TGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCTTTCACCCTTCAGAGGGAGATaGTGTCATTATGATGGGTAC +
Preference number: 4 (lower is better)
Translates to: CGYRRSRNQGPNKSQVLSPFRGR*CHYDGY
Trigger: GTACCCATCATAATGACAGCATCTCCCTCTGAAGGG...TGAAAGCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp CTTAAGAGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAGACATGCAACTACTCTaGGGATACAGACGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LKRQRKKSSHGGRSRNGSDMQLL*GYRRSR
Trigger: CCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTC...TGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCTCTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp ATGGAGACAAGGTCTTTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCTCAGGAAACGAAATTTaGCCACCTCGCTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: METRSFLEESAQVDTLCPSGNEI*PPRCGT
Trigger: AGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGA...GGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAAAGACCTTGTCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp CTTAAGAGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAGGACCCCAGGTACTTTaGGGACAACACTTTGATCAG +
Preference number: 4 (lower is better)
Translates to: LKRQRKKSSHGGRSRNGSGPQVL*GQHFDQ
Trigger: CTGATCAAAGTGTTGTCCCCAAAGTACCTGGGGTCC...TGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCTCTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp GGAGGTGGCAGCTTGAGAGAGGTCTACAACCCACCTAATGGTTTAGAGCCACCTGCCTTGTCAGAAGCTTaGACTTTTCTTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: GGGSLREVYNPPNGLEPPALSEA*TFLHQH
Trigger: ATGCTGATGAAGAAAAGTCCAAGCTTCTGACAAGGC...AGGTGGCTCTAAACCATTAGGTGGGTTGTAGACCTCTCTCAAGCTGCCACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp TGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCTTTCAGATTCTGAAAGACTCTaGAGACAGGGATGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: CGYRRSRNQGPNKSQVLSDSERL*RQGCLP
Trigger: TGGGAGACATCCCTGTCTCCAGAGTCTTTCAGAATC...TGAAAGCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp AGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGCCTTCATGCAGCCTGCTaGATTCTGAAAGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: RTLVVARTRAVTQNWDRGLHAAC*ILKDSG
Trigger: TCCAGAGTCTTTCAGAATCCAGCAGGCTGCATGAAG...GCCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp ACCAGAAGGGCACTGAGTGCCAGCGTGCAACTTGAATTTGATCCCATAAAGTCACTGGTGGCACTTCCTTaGGGACACTTTTCTGCGAAA +
Preference number: 4 (lower is better)
Translates to: TRRALSASVQLEFDPIKSLVALP*GHFSAK
Trigger: TTTCGCAGAAAAGTGTCCCCAAGGAAGTGCCACCAG...TGACTTTATGGGATCAAATTCAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp GGCCAAATGACATGCAACTACTCTGCGGATACAGACGAAGCAGGAATCAGGGACGAAAGTCCTGAGGATTaGACTCTGGAAAACCATCAC +
Preference number: 4 (lower is better)
Translates to: GQMTCNYSADTDEAGIRDESPED*TLENHH
Trigger: GTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTC...GTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp CAGATAACCCCTGACAGACTGAAATACGATCTGGCGACAGCAAGGAGGTGGCAGAGACTGAAGCAACAGTaGAACCTCCAGATACAGATA +
Preference number: 4 (lower is better)
Translates to: QITPDRLKYDLATARRWQRLKQQ*NLQIQI
Trigger: TATCTGTATCTGGAGGTTCCACTGTTGCTTCAGTCT...CTGCCACCTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
3UTR CAA 72 bp CTGTCAGATGTGCACACAAACATCTTGGTGCATCGCTaGGCTTTAAAACAAACTGGGGTCAGGACATGGTGG +
Preference number: 4 (lower is better)
Translates to: LSDVHTNILVHR*ALKQTGVRTWW
Trigger: CCACCATGTCCTGACCCCAGTTTGTTTTAAAGCCAAGCGATGCACCAAGATGTTTGTGTGCACATCTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GGGGACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGGAAATTCTGGATAGCTaGCCAATCCTGTTCCGACAT +
Preference number: 4 (lower is better)
Translates to: GDNTLISSFRKRNLATSLEILDS*PILFRH
Trigger: ATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTC...CAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR TCA 90 bp AGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGAGAAATTCTGGATAGCTaGCCAATCCTGTTCCGACAT +
Preference number: 4 (lower is better)
Translates to: RQRKKSSHGGRSRNGSTGEILDS*PILFRH
Trigger: ATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTC...TCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp CAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGACAGCAAGGAGGTTGGGGACAACACTTTaGTCAGTTCGTTCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: QIQITPDRLKYDLATARRLGTTL*SVRSGN
Trigger: GTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAA...CCTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp ATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCATTGGGGACAACACTTTaGTCAGTTCGTTCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: ISSFRKRNLATSLWNFSPLGTTL*SVRSGN
Trigger: GTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAA...TGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR TCA 90 bp TGCAGGGAGGACATGATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAAGCAGAACTCCTTGGGTaGGGAGGTCATTTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CREDMMWDYLENRPNDMQAELLG*GGHLPG
Trigger: TCCAGGCAAATGACCTCCTCACCCAAGGAGTTCTGC...TTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp AAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAGGCCACTGGACTTGCTaGTTAGAAGGGAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: KVLRIGLWKTITLKRQRKGHWTC*LEGSDA
Trigger: GGCATCACTCCCTTCTAATCAGCAAGTCCAGTGGCC...TTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp AGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGCCCACTTTTATACTCTTaGCGCTGGGTAAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: RTLVVARTRAVTQNWDRGPLLYS*RWVSIF
Trigger: GAAGATGCTTACCCAGCGTCAAGAGTATAAAAGTGG...GCCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAATCCTGTTCCGACATaGTTGGGTCTGTGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQNPVPT*LGLWLC
Trigger: ACAAAGCCACAGACCCAAGCATGTCGGAACAGGATT...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACACAGCAAATTCCTGTCTaGAGAAGGGTTCTGAACACC +
Preference number: 4 (lower is better)
Translates to: QETSLGNTEIQSLRKTATQQIPV*RRVLNT
Trigger: GGTGTTCAGAACCCTTCTGCAGACAGGAATTTGCTG...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp TGTGTGGACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGCATCAAAGGACTGAATaGAGGAAGCTTGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: CVDGKVLRIGLWKTITLKHQRTE*RKLGAG
Trigger: TCCAGCTCCAAGCTTCCTGCATTCAGTCCTTTGATG...CTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp TGCAGGGAGGACATGATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAAAGCACTGGCCATGAGTaGCAGATCTCCAGCACACAC +
Preference number: 4 (lower is better)
Translates to: CREDMMWDYLENRPNDMQSTGHE*QISSTH
Trigger: GTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCT...TTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp AGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGCACAGGCCAAATGACATaGAACTACTCTGCGGATACA +
Preference number: 4 (lower is better)
Translates to: RTLVVARTRAVTQNWDRGTGQMT*NYSADT
Trigger: TGTATCCGCAGAGTAGTTGCATGTCATTTGGCCTGT...GCCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp AAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACTGCTCACAGAAATTCTaGATAGCTGACCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: KRNLATSLWNFSPQWFMHCSQKF*IADQSC
Trigger: ACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCA...GTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp AAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACATCTCTGCTCACAGAAATTCTaGATAGCTGACCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: KFGHLAVELLPTVVHAHLCSQKF*IADQSC
Trigger: ACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCA...GAGATGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp CAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACATGCTCACAGAAATTCTaGATAGCTGACCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: QFVQETKFGHLAVELLPTCSQKF*IADQSC
Trigger: ACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCA...TGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp GTGGTTCATGCACATCTCCAGCACTCACCGTTAAGGCATAAAGAGCTTCCTTCTTCAGGAAACGAAATTTaGCCACCTCGCTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: VVHAHLQHSPLRHKELPSSGNEI*PPRCGT
Trigger: AGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGA...AGAAGGAAGCTCTTTATGCCTTAACGGTGAGTGCTGGAGATGTGCATGAACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS-3UTR CCA 90 bp ATGGAGACAAGGTCTTTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCAAAGGCTGTCCACCTTaGTTGAATGTCAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: METRSFLEESAQVDTLCPKGCPP*LNVSLY
Trigger: GTACAAGCTGACATTCAACCAAGGTGGACAGCCTTT...GGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAAAGACCTTGTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp GCCTGCCTCCTCTCCTCCTACCCCTATCCTGTCCAACACCTAAGCATAGTAGTACACAGAGTGGATGAATaGAACGAACGATACATGAAA +
Preference number: 4 (lower is better)
Translates to: ACLLSSYPYPVQHLSIVVHRVDE*NERYMK
Trigger: TTTCATGTATCGTTCGTTCCATTCATCCACTCTGTG...TACTACTATGCTTAGGTGTTGGACAGGATAGGGGTAGGAGGAGAGGAGGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp ACCAGAAGGGCACTGAGTGCCAGCGTGCAACTTGAATTTGATCCCATAAAGTCATTGGGGACAACACTTTaGTCAGTTCGTTCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: TRRALSASVQLEFDPIKSLGTTL*SVRSGN
Trigger: GTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAA...TGACTTTATGGGATCAAATTCAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGTGGAGCAGAATTCTaGATCCATTCCGGTCATACA +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQSGAEF*IHSGHT
Trigger: TGTATGACCGGAATGGATTCAGAATTCTGCTCCACT...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp AGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGAAGCCTAAGCTTGAAATaGAGGGTCCATCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: RQRKKSSHGGRSRNGSTGSLSLK*RVHLVK
Trigger: TTTCACAAGATGGACCCTTCATTTCAAGCTTAGGCT...TCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp AAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAATTGACACCCAGAGCCTaGCGTCAGGATAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: KVLRIGLWKTITLKRQRKLTPRA*RQDRTL
Trigger: AAGAGTCCTATCCTGACGTCAGGCTCTGGGTGTCAA...TTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGGAGATGCTGTCATTATaGTGGGTACCTCTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQEMLSL*WVPLQD
Trigger: GTCTTGAAGAGGTACCCATCATAATGACAGCATCTC...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp CTTAAGAGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAGGCATTATCAGGGCTTaGAAGGACTTTATTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LKRQRKKSSHGGRSRNGSGIIRA*KDFIVA
Trigger: AGCCACAATAAAGTCCTTTCAAGCCCTGATAATGCC...TGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCTCTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp GGCCAAATGACATGCAACTACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTaGTTTCAAGTAAGAGCATGT +
Preference number: 4 (lower is better)
Translates to: GQMTCNYSADTDEAGIRDPISLR*FQVRAC
Trigger: ACATGCTCTTACTTGAAAGCACCTGAGACTTATTGG...GTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTAGTTGCATGTCATTTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACATACCACTGTCAGATGTaGACACAAACATCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: QETSLGNTEIQSLRKTATYHCQM*TQTSWC
Trigger: GCACCAAGATGTTTGTGTGCACATCTGACAGTGGTA...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGTGCTCACAGAAATTCTaGATAGCTGACCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: KILESTGHECQISSTHIMCSQKF*IADQSC
Trigger: ACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCA...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp ATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCATGCTCACAGAAATTCTaGATAGCTGACCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: ISSFRKRNLATSLWNFSPCSQKF*IADQSC
Trigger: ACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCA...TGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp CAGGTACTTTGGGGACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGGCGGACCCCAGGTACTTTaGGGACAACACTTTGATCAG +
Preference number: 4 (lower is better)
Translates to: QVLWGQHFDQFVQETKFGGPQVL*GQHFDQ
Trigger: CTGATCAAAGTGTTGTCCCCAAAGTACCTGGGGTCC...GCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAAGTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp TTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCAAGACTAACCAGGTCAAGAGTTCAAGATACTaGAAAGCACTGGCCATGAGT +
Preference number: 4 (lower is better)
Translates to: FLEESAQVDTLCPKTNQVKSSRY*KALAMS
Trigger: ACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTT...GACCTGGTTAGTCTTGGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp ACGGAGGTAGGTCACGAAATGGGTCAACAGGACCCCCGAAGAGTTCAAGATACTAGGGAGGACATGATGTaGGATTATTTAGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: TEVGHEMGQQDPRRVQDTREDMM*DYLENR
Trigger: CCTGTTTTCTAAATAATCCCACATCATGTCCTCCCT...AGTATCTTGAACTCTTCGGGGGTCCTGTTGACCCATTTCGTGACCTACCTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp GTTCATGCACATCTCCAGCACTCACCGTTAAGGCATAAAGAGCTTCCTTCTCTTGAAATTCTGGATAGCTaGCCAATCCTGTTCCGACAT +
Preference number: 4 (lower is better)
Translates to: VHAHLQHSPLRHKELPSLEILDS*PILFRH
Trigger: ATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTC...AAGAGAAGGAAGCTCTTTATGCCTTAACGGTGAGTGCTGGAGATGTGCATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS-3UTR TCA 90 bp CTTTGGGGACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCTTGGGGACAACACTTTaGTCAGTTCGTTCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: LWGQHFDQFVQETKFGHLLGTTL*SVRSGN
Trigger: GTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAA...GAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR TCA 90 bp CCCCAGGTACTTTGGGGACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTTAAGCGTCTCGAATCTTaGTGTCTTCCGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: PQVLWGQHFDQFVQETKFKRLES*CLPETR
Trigger: TCTGGTTTCCGGAAGACATCAAGATTCGAGACGCTT...AAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAAGTACCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563494.5
ENST00000570111.5
CDS-3UTR TCA 90 bp AGGGAGGACATGATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAACTAATAAAACCTCCAACCTaGGGCAGGGACAGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: REDMMWDYLENRPNDMQLIKPPT*GRDSVA
Trigger: AGCGACACTGTCCCTGCCTCAGGTTGGAGGTTTTAT...TAGTTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp GACCCAATAAGTCTCAGGTGCTTTCAAGTAAGAGCATGTAGGTGGAAAGGGGCAGATACAGATAACCCCTaGCAGACTGAAATACGATCT +
Preference number: 4 (lower is better)
Translates to: DPISLRCFQVRACRWKGADTDNP*QTEIRS
Trigger: AGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATC...TGCCCCTTTCCACCTACATGCTCTTACTTGAAAGCACCTGAGACTTATTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp GACCCAATAAGTCTCAGGTGCTTTCAAGTAAGAGCATGTAGGTGGAAAGGGGCATTTCTTGGAAGAGAGTaGCCAAGTAGATACTCTCTG +
Preference number: 4 (lower is better)
Translates to: DPISLRCFQVRACRWKGAFLGRE*PSRYSL
Trigger: CAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAAA...TGCCCCTTTCCACCTACATGCTCTTACTTGAAAGCACCTGAGACTTATTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGTTTCACCCTGTCAGATaGTCAGATTTGCTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQFHPVR*SDLLEN
Trigger: GTTCTCTAGCAAATCTGAGCATCTGACAGGGTGAAA...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp GACCCAATAAGTCTCAGGTGCTTTCAAGTAAGAGCATGTAGGTGGAAAGGGGCATGCTCACAGAAATTCTaGATAGCTGACCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: DPISLRCFQVRACRWKGACSQKF*IADQSC
Trigger: ACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCA...TGCCCCTTTCCACCTACATGCTCTTACTTGAAAGCACCTGAGACTTATTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp CAGGTACTTTGGGGACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGGCTCAGGAAACGAAATTTaGCCACCTCGCTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: QVLWGQHFDQFVQETKFGSGNEI*PPRCGT
Trigger: AGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGA...GCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAAGTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CCA 90 bp CTTAAGAGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAGCCTTGTCAGAAGCTTaGACTTTTCTTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: LKRQRKKSSHGGRSRNGSALSEA*TFLHQH
Trigger: ATGCTGATGAAGAAAAGTCCAAGCTTCTGACAAGGC...TGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCTCTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACAGAGCATCTGCAGAATAAGTCAGAGGGATAGGTTCTTTGTGTaGATTGTCAAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTQSICRISQRDRFFV*IVKQQH
Trigger: ATGCTGCTGCTTGACAATCCACACAAAGAACCTATC...CCTCTGACTTATTCTGCAGATGCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp AGGGAGGACATGATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAACTAGAGCTGGGCTCTAAGTaGCCACTGGACTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: REDMMWDYLENRPNDMQLELGSK*PLDLLI
Trigger: AATCAGCAAGTCCAGTGGCCACTTAGAGCCCAGCTC...TAGTTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp GACCCAATAAGTCTCAGGTGCTTTCAAGTAAGAGCATGTAGGTGGAAAGGGGCAAAGAGTTCAAGATACTaGAAAGCACTGGCCATGAGT +
Preference number: 4 (lower is better)
Translates to: DPISLRCFQVRACRWKGAKSSRY*KALAMS
Trigger: ACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTT...TGCCCCTTTCCACCTACATGCTCTTACTTGAAAGCACCTGAGACTTATTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp ACCAGAAGGGCACTGAGTGCCAGCGTGCAACTTGAATTTGATCCCATAAAGTCACTGAGGATTGGACTCTaGAAAACCATCACACTTAAG +
Preference number: 4 (lower is better)
Translates to: TRRALSASVQLEFDPIKSLRIGL*KTITLK
Trigger: CTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG...TGACTTTATGGGATCAAATTCAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGAGGGAGGACATGATGTaGGATTATTTAGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: KILESTGHECQISSTHIMREDMM*DYLENR
Trigger: CCTGTTTTCTAAATAATCCCACATCATGTCCTCCCT...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp CTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAAAGAGCGAAATTCTGGATAGCTaGCCAATCCTGTTCCGACAT +
Preference number: 4 (lower is better)
Translates to: LRIGLWKTITLKRQRKKSEILDS*PILFRH
Trigger: ATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTC...GCTCTTTTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR TCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGTCAACACTATCTTCATaGCCTGTTTGTGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQSTLSS*PVCVQS
Trigger: ACTCTGAACACAAACAGGTCATGAAGATAGTGTTGA...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGCCAATAAGTCTCAGGTaGTTTCAAGTAAGAGCATGT +
Preference number: 4 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQPISLR*FQVRAC
Trigger: ACATGCTCTTACTTGAAAGCACCTGAGACTTATTGG...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp AAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAATGTCTCCCAATGAGCTaGTCACTCTGTTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KVLRIGLWKTITLKRQRKCLPMS*SLCFQR
Trigger: CCTTTGGAAACAGAGTGACCAGCTCATTGGGAGACA...TTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp ATCTTGATGTCTTCCGGAAACCAGACTGTCCAACTGAAGAGTATTTCAATGACTAAGCGTCTCGAATCTTaGTGTCTTCCGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: ILMSSGNQTVQLKSISMTKRLES*CLPETR
Trigger: TCTGGTTTCCGGAAGACATCAAGATTCGAGACGCTT...AGTCATTGAAATACTCTTCAGTTGGACAGTCTGGTTTCCGGAAGACATCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563494.5
ENST00000570111.5
CDS-3UTR TCA 90 bp AGGGAGGACATGATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAACTATCCTCACAGCAATTCTaGCCAGAAACCATGCCTGTA +
Preference number: 4 (lower is better)
Translates to: REDMMWDYLENRPNDMQLSSQQF*PETMPV
Trigger: TACAGGCATGGTTTCTGGTCAGAATTGCTGTGAGGA...TAGTTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR TCA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACATTATCTATAATTCCCTaGCCCAAAGATTACCACTGT +
Preference number: 4 (lower is better)
Translates to: QETSLGNTEIQSLRKTATLSIIP*PKDYHC
Trigger: ACAGTGGTAATCTTTGGGTCAGGGAATTATAGATAA...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp CTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAAAGAGCGATGATGATGAGAAATaGTTCGCATTTCCCACACTG +
Preference number: 4 (lower is better)
Translates to: LRIGLWKTITLKRQRKKSDDDEK*FAFPTL
Trigger: CAGTGTGGGAAATGCGAAGCATTTCTCATCATCATC...GCTCTTTTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp GACCCAATAAGTCTCAGGTGCTTTCAAGTAAGAGCATGTAGGTGGAAAGGGGCAGGAAGAGTAATTAACTaGAGCAAAAGGTTAGGACAA +
Preference number: 4 (lower is better)
Translates to: DPISLRCFQVRACRWKGAGRVIN*SKRLGQ
Trigger: TTGTCCTAACCTTTTGCTGCAGTTAATTACTCTTCC...TGCCCCTTTCCACCTACATGCTCTTACTTGAAAGCACCTGAGACTTATTGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp TGCAGGGAGGACATGATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAAGTCTTTACGAAAAACTaGAACATTAGCTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: CREDMMWDYLENRPNDMQVFTKN*NISWAW
Trigger: CCACGCCCAGCTAATGTTGCAGTTTTTCGTAAAGAC...TTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CCA 90 bp GAGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGACAGTAGGTGCTAAGTaGGAATTGATTATAAACTTG +
Preference number: 4 (lower is better)
Translates to: ENSGSGKNQSCYSELGQRTVGAK*ELIINL
Trigger: CAAGTTTATAATCAATTCCCACTTAGCACCTACTGT...CCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR GCA 90 bp TGCAGGGAGGACATGATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAATTTCACCCTGTCAGATaGTCAGATTTGCTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: CREDMMWDYLENRPNDMQFHPVR*SDLLEN
Trigger: GTTCTCTAGCAAATCTGAGCATCTGACAGGGTGAAA...TTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CCA 90 bp AAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAAGACTGAAGCAACAGTaGAACCTCCAGATACAGATA +
Preference number: 4 (lower is better)
Translates to: KVLRIGLWKTITLKRQRKRLKQQ*NLQIQI
Trigger: TATCTGTATCTGGAGGTTCCACTGTTGCTTCAGTCT...TTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR GCA 90 bp CTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAAAGAGCATAAGGAAACATTTTTaGCCAGTCTTAAGTTCATGG +
Preference number: 4 (lower is better)
Translates to: LRIGLWKTITLKRQRKKSIRKHF*PVLSSW
Trigger: CCATGAACTTAAGACTGGGCAAAAATGTTTCCTTAT...GCTCTTTTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309859.8
3UTR CAA 72 bp CATTTAGAAGATCTTCCAGAACACACACAAGAAGCATaGTCTAATGAAAATGGAGACAAGGTCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: HLEDLPEHTQEA*SNENGDKVFLG
Trigger: TCCAAGAAAGACCTTGTCTCCATTTTCATTAGACAATGCTTCTTGTGTGTGTTCTGGAAGATCTTCTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS GCA 90 bp CAGCCGCCGCCACCGCGGTCGCCGCCATCGCTCCAGCCCCGACGCTaGGGCCGCGGGCGCCACTGCCTCTTCAGCCGCTGTAGCGTCCTG +
Preference number: 5 (lower is better)
Translates to: QPPPPRSPPSLQPRR*GRGRHCLFSRCSVL
Trigger: CAGGACGCTACAGCGGCTGAAGAGGCAGTGGCGCCCGCGGCCGCAGCGTCGGGGCTGGAGCGATGGCGGCGACCGCGGTGGCGGCGGCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309859.8
ENST00000563494.5
ENST00000566547.1
ENST00000568799.1
ENST00000569189.2
CDS GCA 90 bp GACATGCTTGGGTCTGTGGTCACTGAGCCACAGCTCCAGCGACGCTaGCGGGCCCGGGGGACCCTGGGCCGACTCGGTTCCCGCCACAGC +
Preference number: 5 (lower is better)
Translates to: DMLGSVVTEPQLQRR*RARGTLGRLGSRHS
Trigger: GCTGTGGCGGGAACCGAGTCGGCCCAGGGTCCCCCGGGCCCGGCAGCGTCGCTGGAGCTGTGGCTCAGTGACCACAGACCCAAGCATGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS GCA 90 bp CATGCTTGGGTCTGTGGCTTTGTTGAGCCACAGCTCCAGCGACGCTaGCGGGCCCGGGGGACCCTGGGCCGACTCGGTTCCCGCCACAGC +
Preference number: 5 (lower is better)
Translates to: HAWVCGFVEPQLQRR*RARGTLGRLGSRHS
Trigger: GCTGTGGCGGGAACCGAGTCGGCCCAGGGTCCCCCGGGCCCGGCAGCGTCGCTGGAGCTGTGGCTCAACAAAGCCACAGACCCAAGCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000309859.8
ENST00000562117.1
ENST00000562944.5
ENST00000563494.5
ENST00000566547.1
ENST00000567468.5
ENST00000568799.1
ENST00000569189.2
ENST00000570111.5
CDS GCA 90 bp GCAGGGCCTCCTGGTCGGGCGGGGCCTGCCCTGGCCTGCGGTACATaGTCAGCATCTCCTGCAGCACCTTCACATGGCTTCGCACTTCCT +
Preference number: 5 (lower is better)
Translates to: AGPPGRAGPALACGT*SASPAAPSHGFALP
Trigger: AGGAAGTGCGAAGCCATGTGAAGGTGCTGCAGGAGATGCTGAGCATGTACCGCAGGCCAGGGCAGGCCCCGCCCGACCAGGAGGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CCA 90 bp CCTGGCCTGCGGTACATGCTCAGCATCTCCTGCAGCACCTTCACATaGCTTCGCACTTCCTCCACCGCACTGACCCTCTTGGACACCTTC +
Preference number: 5 (lower is better)
Translates to: PGLRYMLSISCSTFT*LRTSSTALTLLDTF
Trigger: GAAGGTGTCCAAGAGGGTCAGTGCGGTGGAGGAAGTGCGAAGCCATGTGAAGGTGCTGCAGGAGATGCTGAGCATGTACCGCAGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CCA 90 bp GCACCTGCACAGACACAGGACCCCCAGGAGAAGGTGGAAAGCCAGTaGTCCCAGGCTCCCCTCCAGGCGTTAAGGCATAAAGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: APAQTQDPQEKVESQ*SQAPLQALRHKELP
Trigger: AGGAAGCTCTTTATGCCTTAACGCCTGGAGGGGAGCCTGGGACCACTGGCTTTCCACCTTCTCCTGGGGGTCCTGTGTCTGTGCAGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562944.5
CDS-3UTR CAA 90 bp CCCCTCCAGGCTGGTAATCACTTGCTGGAGACTGCGCTGGAACCAAGGCTAACCCTTGGGTCTGTGGCTTaGTTGAGCCACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PLQAGNHLLETALEPRLTLGSVA*LSHSSS
Trigger: GCTGGAGCTGTGGCTCAACAAAGCCACAGACCCAAG...GGTTAGCCTTGGTTCCAGCGCAGTCTCCAGCAAGTGATTACCAGCCTGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569189.2
CDS GCA 90 bp GCTAAAGAACCAACCCCTCCCCAGAGGCAGAGATCTGGTATCCAGTaGCCAAGACCAGCCGGATGTCACCCACTGGCACTCAAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: AKEPTPPQRQRSGIQ*PRPAGCHPLALKRQ
Trigger: TTGCCTCTTGAGTGCCAGTGGGTGACATCCGGCTGGTCTTGGGCACTGGATACCAGATCTCTGCCTCTGGGGAGGGGTTGGTTCTTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568799.1
CDS TCA 90 bp TGTGCTGAGAGGAGGTCCAGCAAATTCCTGTCTGCAGAAGGGTTCTaGACACCACCGCCTGGCAGCGTGCTGGAGGAGGGATTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: CAERRSSKFLSAEGF*TPPPGSVLEEGFLF
Trigger: AAAGAGGAATCCCTCCTCCAGCACGCTGCCAGGCGGTGGTGTTCAGAACCCTTCTGCAGACAGGAATTTGCTGGACCTCCTCTCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000569182.1
CDS TCA 90 bp GGCGGCAGGCTGCTGGGCTTAACAGACTCCAAAGGGACAAACACTTaGGCCAGAGGTGTATTCTGTGAAGATGGGGAAGGAGCCAACGGG +
Preference number: 5 (lower is better)
Translates to: GGRLLGLTDSKGTNT*ARGVFCEDGEGANG
Trigger: CCCGTTGGCTCCTTCCCCATCTTCACAGAATACACCTCTGGCTCAAGTGTTTGTCCCTTTGGAGTCTGTTAAGCCCAGCAGCCTGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CCA 90 bp AGCACCTGTACCTCTGGGTGCCCAGGGGCTCCCGTCTGGGAGAAGTaGAGCAGAATTCTGAATCCATTCCGGTCATACACAATGAGAGGC +
Preference number: 5 (lower is better)
Translates to: STCTSGCPGAPVWEK*SRILNPFRSYTMRG
Trigger: GCCTCTCATTGTGTATGACCGGAATGGATTCAGAATTCTGCTCCACTTCTCCCAGACGGGAGCCCCTGGGCACCCAGAGGTACAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp AAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACATCTCTGCGGAGACTGGATCTaGTGGGCCAGTAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: KFGHLAVELLPTVVHAHLCGDWI*WASSQG
Trigger: GCCCTGGCTACTGGCCCACAAGATCCAGTCTCCGCA...GAGATGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CAA 90 bp CAGCTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTCCCTCCATCACCTGTTaGTACAGCAGAACTCCTTGG +
Preference number: 5 (lower is better)
Translates to: QLLGLQSPPPSHLSQAQVPSITC*YSRTPW
Trigger: CCAAGGAGTTCTGCTGTACAAACAGGTGATGGAGGG...AACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS TCA 90 bp GCCTGCTGGATTCTGAAAGACTCTGGAGACAGGGATGTCTCCCAATaGGCTGGTCACTCTGTTTCCAAAGGTGACCCGGCCCTCCATCAC +
Preference number: 5 (lower is better)
Translates to: ACWILKDSGDRDVSQ*AGHSVSKGDPALHH
Trigger: GTGATGGAGGGCCGGGTCACCTTTGGAAACAGAGTGACCAGCTCATTGGGAGACATCCCTGTCTCCAGAGTCTTTCAGAATCCAGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS TCA 90 bp AACAGACTCCAAAGGGACAAACACTTGAGCCAGAGGTGTATTCTGTaGAGATGGGGAAGGAGCCAACGGGCCAGCCTCCCAGGACCAACC +
Preference number: 5 (lower is better)
Translates to: NRLQRDKHLSQRCIL*RWGRSQRASLPGPT
Trigger: GGTTGGTCCTGGGAGGCTGGCCCGTTGGCTCCTTCCCCATCTTCACAGAATACACCTCTGGCTCAAGTGTTTGTCCCTTTGGAGTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS TCA 90 bp GCCTGCTGGATTCTGAAAGACTCCAGGCCCAGCTCCAAGCAGTCTTaGTTCAGAAGGTCCAAGCCAGGGACCGCATTTCAACCAGTGCTC +
Preference number: 5 (lower is better)
Translates to: ACWILKDSRPSSKQS*FRRSKPGTAFQPVL
Trigger: GAGCACTGGTTGAAATGCGGTCCCTGGCTTGGACCTTCTGAATCAAGACTGCTTGGAGCTGGGCCTGGAGTCTTTCAGAATCCAGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569182.1
CDS CCA 90 bp AGCATCACTGATTCCCAAGGCTGCCAGGTCCTGATGAAGCAAAGATaGCACCACAGTCCCCATCTGCGCAGGTCCATTGTCCACCTCCAA +
Preference number: 5 (lower is better)
Translates to: SITDSQGCQVLMKQR*HHSPHLRRSIVHLQ
Trigger: TTGGAGGTGGACAATGGACCTGCGCAGATGGGGACTGTGGTGCCATCTTTGCTTCATCAGGACCTGGCAGCCTTGGGAATCAGTGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000569182.1
CDS CCA 90 bp CGGGCCAGCCTCCCAGGACCAACCTGGAGAGGACTTAGTACCTGGTaGCACTTCCTTGGGGACACTTTTCTGCGAAACATAATTCAGAGG +
Preference number: 5 (lower is better)
Translates to: RASLPGPTWRGLSTW*HFLGDTFLRNIIQR
Trigger: CCTCTGAATTATGTTTCGCAGAAAAGTGTCCCCAAGGAAGTGCCACCAGGTACTAAGTCCTCTCCAGGTTGGTCCTGGGAGGCTGGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000569182.1
CDS-3UTR CAA 90 bp GGAGGTGGCAGCTTGAGAGAGGTCTACAACCCACCTAATGGTTTAGAGCCACCTCTTGGGTCTGTGGCTTaGTTGAGCCACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GGGSLREVYNPPNGLEPPLGSVA*LSHSSS
Trigger: GCTGGAGCTGTGGCTCAACAAAGCCACAGACCCAAG...AGGTGGCTCTAAACCATTAGGTGGGTTGTAGACCTCTCTCAAGCTGCCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp AAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACGCATGTGTGGGGCCATaGGGGTCAGTGTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: KRNLATSLWNFSPQWFMHACVGP*GSVFTC
Trigger: GCAGGTGAACACTGACCCCAATGGCCCCACACATGC...GTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS-3UTR CAA 90 bp AGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGCTGCGGAGACTGGATCTaGTGGGCCAGTAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RTLVVARTRAVTQNWDRGCGDWI*WASSQG
Trigger: GCCCTGGCTACTGGCCCACAAGATCCAGTCTCCGCA...GCCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp CAGCTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTTTCAGGAAACGAAATTaGGCCACCTCGCTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: QLLGLQSPPPSHLSQAQVFRKRN*ATSLWN
Trigger: GTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAA...AACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp GGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGACCCCCGAAGGTCCTCGGGGTGGTaGCTCTTTAGAAGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: GKRAVTEVGHEMGQQDPRRSSGW*LFRSLV
Trigger: GACAAGGCTTCTAAAGAGCAACCACCCCGAGGACCT...TCGGGGGTCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS TCA 90 bp AGACAGGGATGTCTCCCAATGAGCTGGTCACTCTGTTTCCAAAGGTaGCCCGGCCCTCCATCACCTGTTTGTACAGCAGAACTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: RQGCLPMSWSLCFQR*PGPPSPVCTAELLG
Trigger: CCCAAGGAGTTCTGCTGTACAAACAGGTGATGGAGGGCCGGGTCACCTTTGGAAACAGAGTGACCAGCTCATTGGGAGACATCCCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS GCA 90 bp AATTCCTGTCTGCAGAAGGGTTCTGAACACCACCGCCTGGCAGCGTaGTGGAGGAGGGATTCCTCTTTTCCTCACAGCAATTCTGACCAG +
Preference number: 5 (lower is better)
Translates to: NSCLQKGSEHHRLAA*WRRDSSFPHSNSDQ
Trigger: CTGGTCAGAATTGCTGTGAGGAAAAGAGGAATCCCTCCTCCAGCACGCTGCCAGGCGGTGGTGTTCAGAACCCTTCTGCAGACAGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000569182.1
CDS GCA 90 bp CCAGGGCGCATGTGTGGGGCTTACCCATTGGGGTCAGTGTTCACCTaGTCACAGAAATTCTGGATAGCTGACCAATCCTGTTCCGACATG +
Preference number: 5 (lower is better)
Translates to: PGRMCGAYPLGSVFT*SQKFWIADQSCSDM
Trigger: CATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGGTAAGCCCCACACATGCGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS CCA 90 bp AAGGTGACCCGGCCCTCCATCACCTGTTTGTACAGCAGAACTCCTTaGGTGAGGAGGTCATTTGCCTGGAGAATTTCCGCGAGTGCATCA +
Preference number: 5 (lower is better)
Translates to: KVTRPSITCLYSRTP*VRRSFAWRISASAS
Trigger: TGATGCACTCGCGGAAATTCTCCAGGCAAATGACCTCCTCACCCAAGGAGTTCTGCTGTACAAACAGGTGATGGAGGGCCGGGTCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CCA 90 bp TCCTGTCTGCAGAAGGGTTCTGAACACCACCGCCTGGCAGCGTGCTaGAGGAGGGATTCCTCTTTTCCTCACAGCAATTCTGACCAGAAA +
Preference number: 5 (lower is better)
Translates to: SCLQKGSEHHRLAAC*RRDSSFPHSNSDQK
Trigger: TTTCTGGTCAGAATTGCTGTGAGGAAAAGAGGAATCCCTCCTCCAGCACGCTGCCAGGCGGTGGTGTTCAGAACCCTTCTGCAGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000569182.1
CDS CCA 90 bp CAACGGGCCAGCCTCCCAGGACCAACCTGGAGAGGACTTAGTACCTaGTGGCACTTCCTTGGGGACACTTTTCTGCGAAACATAATTCAG +
Preference number: 5 (lower is better)
Translates to: QRASLPGPTWRGLST*WHFLGDTFLRNIIQ
Trigger: CTGAATTATGTTTCGCAGAAAAGTGTCCCCAAGGAAGTGCCACCAGGTACTAAGTCCTCTCCAGGTTGGTCCTGGGAGGCTGGCCCGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000569182.1
CDS-3UTR CAA 90 bp CAGTGGAACCTCCAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGGGGTCTGTGGCTTTGTaGAGCCACAGCTCCAGCGAC +
Preference number: 5 (lower is better)
Translates to: QWNLQIQITPDRLKYDLAGSVAL*SHSSSD
Trigger: GTCGCTGGAGCTGTGGCTCAACAAAGCCACAGACCC...CGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTGGAGGTTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp GAGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGGGGTCTGTGGCTTTGTaGAGCCACAGCTCCAGCGAC +
Preference number: 5 (lower is better)
Translates to: ENSGSGKNQSCYSELGQRGSVAL*SHSSSD
Trigger: GTCGCTGGAGCTGTGGCTCAACAAAGCCACAGACCC...CCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp AAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCACATCTCCTTGGGTCTGTGGCTTaGTTGAGCCACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: KFGHLAVELLPTVVHAHLLGSVA*LSHSSS
Trigger: GCTGGAGCTGTGGCTCAACAAAGCCACAGACCCAAG...GAGATGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CAA 90 bp CAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGACAGCAAGGAGGGCATGTGTGGGGCCATaGGGGTCAGTGTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: QIQITPDRLKYDLATARRACVGP*GSVFTC
Trigger: GCAGGTGAACACTGACCCCAATGGCCCCACACATGC...CCTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACATGCGGAGACTGGATCTaGTGGGCCAGTAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QETSLGNTEIQSLRKTATCGDWI*WASSQG
Trigger: GCCCTGGCTACTGGCCCACAAGATCCAGTCTCCGCA...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp GGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGACCCCCGAATCTGCGCAGGTCCATaGTCCACCTCCAAGTCAATC +
Preference number: 5 (lower is better)
Translates to: GKRAVTEVGHEMGQQDPRICAGP*STSKSI
Trigger: GATTGACTTGGAGGTGGACAATGGACCTGCGCAGAT...TCGGGGGTCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp CAGCTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTCAAAGGGACAAACACTaGAGCCAGAGGTGTATTCTG +
Preference number: 5 (lower is better)
Translates to: QLLGLQSPPPSHLSQAQVQRDKH*SQRCIL
Trigger: CAGAATACACCTCTGGCTCAAGTGTTTGTCCCTTTG...AACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp GGAGGTGGCAGCTTGAGAGAGGTCTACAACCCACCTAATGGTTTAGAGCCACCTCAAGGAGGTGGCAGCTaGAGAGAGGTCTACAACCCA +
Preference number: 5 (lower is better)
Translates to: GGGSLREVYNPPNGLEPPQGGGS*REVYNP
Trigger: TGGGTTGTAGACCTCTCTCAAGCTGCCACCTCCTTG...AGGTGGCTCTAAACCATTAGGTGGGTTGTAGACCTCTCTCAAGCTGCCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS TCA 90 bp GAGCTGGGCTCTAAGTGGCCACTGGACTTGCTGATTAGAAGGGAGTaGTGCCATAAACCACAGCCACTTTCAGGACAGCAGCCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: ELGSKWPLDLLIRRE*CHKPQPLSGQQPEG
Trigger: ACCTTCAGGCTGCTGTCCTGAAAGTGGCTGTGGTTTATGGCATCACTCCCTTCTAATCAGCAAGTCCAGTGGCCACTTAGAGCCCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567468.5
CDS TCA 90 bp TCCAAGTCAATCAGGGGGCAGGTCTTCATGCAGCCTGCTGGATTCTaGAAGACTCCAGGCCCAGCTCCAAGCAGTCTTGATTCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: SKSIRGQVFMQPAGF*KTPGPAPSSLDSEG
Trigger: ACCTTCTGAATCAAGACTGCTTGGAGCTGGGCCTGGAGTCTTTCAGAATCCAGCAGGCTGCATGAAGACCTGCCCCCTGATTGACTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569182.1
CDS GCA 90 bp GGGTCTGTGGCTTTGTCTTCAGGGCTAGGGCAGCTGTTGGCCAACTaGAGAGATAAAGAGAAAGGCAGCTTGACCATGAGCCAAGAAGCT +
Preference number: 5 (lower is better)
Translates to: GSVALSSGLGQLLAN*RDKEKGSLTMSQEA
Trigger: AGCTTCTTGGCTCATGGTCAAGCTGCCTTTCTCTTTATCTCTGCAGTTGGCCAACAGCTGCCCTAGCCCTGAAGACAAAGCCACAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569300.5
CDS CCA 90 bp TGTGTGGGGCCATTGGGGTCAGTGTTCACCTGCTCACAGAAATTCTaGATAGCTGACCAATCCTGTTCCGACATGCTTGGGTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: CVGPLGSVFTCSQKF*IADQSCSDMLGSVA
Trigger: AGCCACAGACCCAAGCATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGCCCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309859.8
ENST00000562117.1
ENST00000562944.5
ENST00000567468.5
ENST00000568799.1
ENST00000569300.5
CDS CCA 90 bp GGTCCATCTTGTGAAAAGTTAGGCTGCGCCCAAGACAGCCAGGTCTaGGAAGTCTTTCACTTCTCCTACTTCGCTGAAAGGCTGTCCACC +
Preference number: 5 (lower is better)
Translates to: GPSCEKLGCAQDSQV*EVFHFSYFAERLST
Trigger: GGTGGACAGCCTTTCAGCGAAGTAGGAGAAGTGAAAGACTTCCCAGACCTGGCTGTCTTGGGCGCAGCCTAACTTTTCACAAGATGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000568922.1
CDS CCA 90 bp GGGGCTTACCCATTGGGGTCAGTGTTCACCTGCTCACAGAAATTCTaGATAGCTGACCAATCCTGTTCCGACATGCTTGGGTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: GAYPLGSVFTCSQKF*IADQSCSDMLGSVA
Trigger: AGCCACAGACCCAAGCATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGGTAAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS CCA 90 bp TGTGTGGGGCCATTGGGGTCAGTGTTCACCTGCTCACAGAAATTCTaGATAGCTGACCAATCCTGTTCCGACATGCTTGGGTCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: CVGPLGSVFTCSQKF*IADQSCSDMLGSVV
Trigger: GACCACAGACCCAAGCATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGCCCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS-3UTR CAA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGGCATGTGTGGGGCCATaGGGGTCAGTGTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQACVGP*GSVFTC
Trigger: GCAGGTGAACACTGACCCCAATGGCCCCACACATGC...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp GAATTTGCTTCTCCCCAGAGGAAAAGAAGCTCCTTCAGGGTGGTGCCTGGCTCAACCGCACTGACCCTCTaGGACACCTTCTCCGATTTT +
Preference number: 5 (lower is better)
Translates to: EFASPQRKRSSFRVVPGSTALTL*DTFSDF
Trigger: AAAATCGGAGAAGGTGTCCAAGAGGGTCAGTGCGGT...TGAGCCAGGCACCACCCTGAAGGAGCTTCTTTTCCTCTGGGGAGAAGCAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp GAGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGAGCCAGTTCAGCTGCTaGGACTTCAAAGCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: ENSGSGKNQSCYSELGQRSQFSC*DFKALR
Trigger: GCGGAGGGCTTTGAAGTCCAAGCAGCTGAACTGGCT...CCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp TACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCCAAGGAGGTGGCAGCTaGAGAGAGGTCTACAACCCA +
Preference number: 5 (lower is better)
Translates to: YSADTDEAGIRDPISLRCQGGGS*REVYNP
Trigger: TGGGTTGTAGACCTCTCTCAAGCTGCCACCTCCTTG...GCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp TTTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCGGGTCTGTGGCTTTGTaGAGCCACAGCTCCAGCGAC +
Preference number: 5 (lower is better)
Translates to: FDQFVQETKFGHLAVELLGSVAL*SHSSSD
Trigger: GTCGCTGGAGCTGTGGCTCAACAAAGCCACAGACCC...GAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CAA 90 bp AACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACGGGTCTGTGGCTTTGTaGAGCCACAGCTCCAGCGAC +
Preference number: 5 (lower is better)
Translates to: NTLISSFRKRNLATSLWNGSVAL*SHSSSD
Trigger: GTCGCTGGAGCTGTGGCTCAACAAAGCCACAGACCC...GTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CAA 90 bp TGTGTGGACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGCTTGGGTCTGTGGCTTaGTTGAGCCACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CVDGKVLRIGLWKTITLKLGSVA*LSHSSS
Trigger: GCTGGAGCTGTGGCTCAACAAAGCCACAGACCCAAG...CTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp GAGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGAGGTCCTCGGGGTGGTaGCTCTTTAGAAGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: ENSGSGKNQSCYSELGQRRSSGW*LFRSLV
Trigger: GACAAGGCTTCTAAAGAGCAACCACCCCGAGGACCT...CCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp AGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGACCTCTCCTGTCCAGCTaGCCTCAGATCTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: RQRKKSSHGGRSRNGSTGPLLSS*PQIFRF
Trigger: GAACCTGAAGATCTGAGGCAAGCTGGACAGGAGAGG...TCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGAAGCAGGCCCTGGTCTaGGCAGATGATACCAGAAGG +
Preference number: 5 (lower is better)
Translates to: KILESTGHECQISSTHIMKQALV*ADDTRR
Trigger: CCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTT...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS TCA 90 bp GCCATTGGGGTCAGTGTTCACCTGCTCACAGAAATTCTGGATAGCTaGCCAATCCTGTTCCGACATGCTTGGGTCTGTGGCTTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: AIGVSVHLLTEILDS*PILFRHAWVCGFVE
Trigger: CTCAACAAAGCCACAGACCCAAGCATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309859.8
ENST00000562117.1
ENST00000562944.5
ENST00000567468.5
ENST00000568799.1
CDS TCA 90 bp CCCATTGGGGTCAGTGTTCACCTGCTCACAGAAATTCTGGATAGCTaGCCAATCCTGTTCCGACATGCTTGGGTCTGTGGCTTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: PIGVSVHLLTEILDS*PILFRHAWVCGFVE
Trigger: CTCAACAAAGCCACAGACCCAAGCATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563494.5
ENST00000566547.1
ENST00000569189.2
ENST00000570111.5
CDS TCA 90 bp CACACACAGAATGGATCGGGAGTTGTGTGGTCAATAACCGGCATCTaGGACGCAGCATCAACAGCCAGGGCACATCTTGGGTTGAATTCT +
Preference number: 5 (lower is better)
Translates to: HTQNGSGVVWSITGI*DAASTARAHLGLNS
Trigger: AGAATTCAACCCAAGATGTGCCCTGGCTGTTGATGCTGCGTCTCAGATGCCGGTTATTGACCACACAACTCCCGATCCATTCTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568922.1
CDS TCA 90 bp GCCATTGGGGTCAGTGTTCACCTGCTCACAGAAATTCTGGATAGCTaGCCAATCCTGTTCCGACATGCTTGGGTCTGTGGCTTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: AIGVSVHLLTEILDS*PILFRHAWVCGFVF
Trigger: GAAGACAAAGCCACAGACCCAAGCATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569300.5
CDS-3UTR CAA 90 bp AGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGAAGAGCTTCCTTCTCTaGCGGAGACTGGATCTTGTG +
Preference number: 5 (lower is better)
Translates to: RKRNLATSLWNFSPQWFMKSFLL*RRLDLV
Trigger: CACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCTT...CATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CAA 90 bp TCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACTTCAGGAAACGAAATTaGGCCACCTCGCTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: SVRSGNEIWPPRCGTSPHFRKRN*ATSLWN
Trigger: GTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAA...GTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CAA 90 bp GAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCATTCAGGAAACGAAATTaGGCCACCTCGCTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: ETKFGHLAVELLPTVVHAFRKRN*ATSLWN
Trigger: GTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAA...TGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CAA 90 bp GGAGGTGGCAGCTTGAGAGAGGTCTACAACCCACCTAATGGTTTAGAGCCACCTTGGTTGAATGTCAGCTaGTACCGTAAGCGGATAGGT +
Preference number: 5 (lower is better)
Translates to: GGGSLREVYNPPNGLEPPWLNVS*YRKRIG
Trigger: ACCTATCCGCTTACGGTACAAGCTGACATTCAACCA...AGGTGGCTCTAAACCATTAGGTGGGTTGTAGACCTCTCTCAAGCTGCCACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp AGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGCGGCTGTCCACCTTGGTaGAATGTCAGCTTGTACCGT +
Preference number: 5 (lower is better)
Translates to: RTLVVARTRAVTQNWDRGGCPPW*NVSLYR
Trigger: ACGGTACAAGCTGACATTCAACCAAGGTGGACAGCC...GCCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp ACCAGAAGGGCACTGAGTGCCAGCGTGCAACTTGAATTTGATCCCATAAAGTCAAAGCAGGCCCTGGTCTaGGCAGATGATACCAGAAGG +
Preference number: 5 (lower is better)
Translates to: TRRALSASVQLEFDPIKSKQALV*ADDTRR
Trigger: CCTTCTGGTATCATCTGCCAAGACCAGGGCCTGCTT...TGACTTTATGGGATCAAATTCAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp GCCTGCCTCCTCTCCTCCTACCCCTATCCTGTCCAACACCTAAGCATAGTAGTAGTGCACACAAACATCTaGGTGCATCGCTTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: ACLLSSYPYPVQHLSIVVVHTNI*VHRLAL
Trigger: TAAAGCCAAGCGATGCACCAAGATGTTTGTGTGCAC...TACTACTATGCTTAGGTGTTGGACAGGATAGGGGTAGGAGGAGAGGAGGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CCA 90 bp TTACCTTACCCATTGGGGTCAGTGTTCACCTGCTCACAGAAATTCTaGATAGCTGACCAATCCTGTTCCGACATGCTTGGGTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: LPYPLGSVFTCSQKF*IADQSCSDMLGSVA
Trigger: AGCCACAGACCCAAGCATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGGTAAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566547.1
CDS-3UTR CAA 90 bp CAGGTACTTTGGGGACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGGCCTTGGGTCTGTGGCTTaGTTGAGCCACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QVLWGQHFDQFVQETKFGLGSVA*LSHSSS
Trigger: GCTGGAGCTGTGGCTCAACAAAGCCACAGACCCAAG...GCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAAGTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CAA 90 bp AATCTTGATGTCTTCCGGAAACCAGACTGTCCAACTGAAGAGTATTTCAATGACTGCGGAGACTGGATCTaGTGGGCCAGTAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: NLDVFRKPDCPTEEYFNDCGDWI*WASSQG
Trigger: GCCCTGGCTACTGGCCCACAAGATCCAGTCTCCGCA...GTCATTGAAATACTCTTCAGTTGGACAGTCTGGTTTCCGGAAGACATCAAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563494.5
ENST00000570111.5
CDS-3UTR CAA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACAGTACAGCAGAACTCCTaGGGTGAGGAGGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: QETSLGNTEIQSLRKTATVQQNS*GEEVIC
Trigger: GCAAATGACCTCCTCACCCAAGGAGTTCTGCTGTAC...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp GAGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGGCAGCTTCACTCTCATaGACTTTGGCACAGCCACTT +
Preference number: 5 (lower is better)
Translates to: ENSGSGKNQSCYSELGQRAASLS*TLAQPL
Trigger: AAGTGGCTGTGCCAAAGTCAATGAGAGTGAAGCTGC...CCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp CTGCTTGGACTTCAAAGCCCTCCGCCTAGCCATCTCAGCCAGGCTCAGGTTCCTCTCCACAAAGTACACTaGCTACATGGTATTTATTCA +
Preference number: 5 (lower is better)
Translates to: LLGLQSPPPSHLSQAQVPLHKVH*LHGIYS
Trigger: TGAATAAATACCATGTAGCAAGTGTACTTTGTGGAG...AGGAACCTGAGCCTGGCTGAGATGGCTAGGCGGAGGGCTTTGAAGTCCAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp GGGTCAACAGGACCCCCGAAGAGTTCAAGATACTGGAAAGCACTGGCCATGAGTATCTTCATGACCTGTTaGTGTTCAGAGTGGCTCACA +
Preference number: 5 (lower is better)
Translates to: GSTGPPKSSRYWKALAMSIFMTC*CSEWLT
Trigger: TGTGAGCCACTCTGAACACAAACAGGTCATGAAGAT...ACTCATGGCCAGTGCTTTCCAGTATCTTGAACTCTTCGGGGGTCCTGTTGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS TCA 90 bp TCTTGTTCCTCCTTGACCAAATTCTTGATTAACCGGTTTGCAGCCTaGAGGTCCTCGGGGTGGTTGCTCTTTAGAAGCCTTGTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SCSSLTKFLINRFAA*RSSGWLLFRSLVRS
Trigger: GCTTCTGACAAGGCTTCTAAAGAGCAACCACCCCGAGGACCTTCAGGCTGCAAACCGGTTAATCAAGAATTTGGTCAAGGAGGAACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567201.5
CDS-3UTR CAA 90 bp TCTTCCGGAAACCAGACTGTCCAACTGAAGAGTATTTCAATGACTCTTCCTTTAGGGTCTGTGGCTTTGTaGAGCCACAGCTCCAGCGAC +
Preference number: 5 (lower is better)
Translates to: SSGNQTVQLKSISMTLPLGSVAL*SHSSSD
Trigger: GTCGCTGGAGCTGTGGCTCAACAAAGCCACAGACCC...TAAAGGAAGAGTCATTGAAATACTCTTCAGTTGGACAGTCTGGTTTCCGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563494.5
ENST00000570111.5
CDS-3UTR CAA 90 bp GACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAAGAGCTTCCTTCTCTaGCGGAGACTGGATCTTGTG +
Preference number: 5 (lower is better)
Translates to: DGKVLRIGLWKTITLKRQKSFLL*RRLDLV
Trigger: CACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCTT...CTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp ACCAGAAGGGCACTGAGTGCCAGCGTGCAACTTGAATTTGATCCCATAAAGTCAAAGAGCTTCCTTCTCTaGCGGAGACTGGATCTTGTG +
Preference number: 5 (lower is better)
Translates to: TRRALSASVQLEFDPIKSKSFLL*RRLDLV
Trigger: CACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCTT...TGACTTTATGGGATCAAATTCAAGTTGCACGCTGGCACTCAGTGCCCTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp TTGATCAGTTCGTTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCTTCAGGAAACGAAATTaGGCCACCTCGCTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: LISSFRKRNLATSLWNFSFRKRN*ATSLWN
Trigger: GTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAA...GGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAACGAACTGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CAA 90 bp TGTGTGGACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGTTCAGGAAACGAAATTaGGCCACCTCGCTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: CVDGKVLRIGLWKTITLKFRKRN*ATSLWN
Trigger: GTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAA...CTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp CAGCATCTGATAAGCGTCTCGAATCTTGATGTCTTCCGGAAACCAGACTGTCCATTCAGGAAACGAAATTaGGCCACCTCGCTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: QHLISVSNLDVFRKPDCPFRKRN*ATSLWN
Trigger: GTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAA...TGGACAGTCTGGTTTCCGGAAGACATCAAGATTCGAGACGCTTATCAGATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563494.5
ENST00000570111.5
CDS-3UTR CAA 90 bp TACTCTGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCAGCCTTGTCAGAAGCTaGGACTTTTCTTCATCAGCA +
Preference number: 5 (lower is better)
Translates to: YSADTDEAGIRDPISLRCSLVRS*DFSSSA
Trigger: TGCTGATGAAGAAAAGTCCAAGCTTCTGACAAGGCT...GCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp GAATTTGCTTCTCCCCAGAGGAAAAGAAGCTCCTTCAGGGTGGTGCCTGGCTCATGCTCTTTAGAAGCCTaGTCAGAAGCTTGGACTTTT +
Preference number: 5 (lower is better)
Translates to: EFASPQRKRSSFRVVPGSCSLEA*SEAWTF
Trigger: AAAAGTCCAAGCTTCTGACAAGGCTTCTAAAGAGCA...TGAGCCAGGCACCACCCTGAAGGAGCTTCTTTTCCTCTGGGGAGAAGCAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp TTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCAAGACTAACCAGGTCCTTTGGCACAGCCACTaGAAACATGATATCCCAGAC +
Preference number: 5 (lower is better)
Translates to: FLEESAQVDTLCPKTNQVLWHSH*KHDIPD
Trigger: GTCTGGGATATCATGTTTCAAGTGGCTGTGCCAAAG...GACCTGGTTAGTCTTGGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CCA 90 bp GGGAAGTCTTTCACTTCTCCTACTTCGCTGAAAGGCTGTCCACCTTaGTTGAATGTCAGCTTGTACCGTAAGCGGATAGGTTCTTTGTGT +
Preference number: 5 (lower is better)
Translates to: GKSFTSPTSLKGCPP*LNVSLYRKRIGSLC
Trigger: ACACAAAGAACCTATCCGCTTACGGTACAAGCTGACATTCAACCAAGGTGGACAGCCTTTCAGCGAAGTAGGAGAAGTGAAAGACTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000568922.1
CDS-3UTR CAA 90 bp GTTCATGCACATCTCCAGCACTCACCGTTAAGGCATAAAGAGCTTCCTTCTCTTAAGAGCTTCCTTCTCTaGCGGAGACTGGATCTTGTG +
Preference number: 5 (lower is better)
Translates to: VHAHLQHSPLRHKELPSLKSFLL*RRLDLV
Trigger: CACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCTT...AAGAGAAGGAAGCTCTTTATGCCTTAACGGTGAGTGCTGGAGATGTGCATGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS-3UTR CAA 90 bp ACGGAGGTAGGTCACGAAATGGGTCAACAGGACCCCCGAAGAGTTCAAGATACTTTTGGGGACAACACTTaGATCAGTTCGTTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: TEVGHEMGQQDPRRVQDTFGDNT*ISSFRK
Trigger: TTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAA...AGTATCTTGAACTCTTCGGGGGTCCTGTTGACCCATTTCGTGACCTACCTCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp GAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCATGCATTTGGGGACAACACTTaGATCAGTTCGTTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: ETKFGHLAVELLPTVVHAFGDNT*ISSFRK
Trigger: TTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAA...TGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CAA 90 bp TTCAGGAAACGAAATTTGGCCACCTCGCTGTGGAACTTCTCCCCACAGTGGTTCTTTGGGGACAACACTTaGATCAGTTCGTTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: FRKRNLATSLWNFSPQWFFGDNT*ISSFRK
Trigger: TTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAA...GAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTTCGTTTCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563047.1
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CAA 90 bp AGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAACAGGAAGCCTTGTCAGAAGCTaGGACTTTTCTTCATCAGCA +
Preference number: 5 (lower is better)
Translates to: RQRKKSSHGGRSRNGSTGSLVRS*DFSSSA
Trigger: TGCTGATGAAGAAAAGTCCAAGCTTCTGACAAGGCT...TCCTGTTGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp AGAACTCTGGTAGTGGCAAGAACCAGAGCTGTTACTCAGAATTGGGACAGAGGCTCCTTGACCAAATTCTaGATTAACCGGTTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: RTLVVARTRAVTQNWDRGSLTKF*INRFAA
Trigger: GGCTGCAAACCGGTTAATCAAGAATTTGGTCAAGGA...GCCTCTGTCCCAATTCTGAGTAACAGCTCTGGTTCTTGCCACTACCAGAGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp CAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGACAGCAAGGAGGTCACTCTCATTGACTTaGGCACAGCCACTTGAAACA +
Preference number: 5 (lower is better)
Translates to: QIQITPDRLKYDLATARRSLSLT*AQPLET
Trigger: TGTTTCAAGTGGCTGTGCCAAAGTCAATGAGAGTGA...CCTCCTTGCTGTCGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp CTTAAGAGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCAAAGCGGATAGGTTCTTaGTGTGGATTGTCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: LKRQRKKSSHGGRSRNGSKRIGS*CGLSSS
Trigger: GCTGCTTGACAATCCACACAAAGAACCTATCCGCTT...TGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCTCTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACAGAAAGGCTGTCCACCTaGGTTGAATGTCAGCTTGTA +
Preference number: 5 (lower is better)
Translates to: QETSLGNTEIQSLRKTATERLST*VECQLV
Trigger: TACAAGCTGACATTCAACCAAGGTGGACAGCCTTTC...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp CTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAAAAGAGCGTCAGGATAGGACTCTaGGCACTCCGCACTGAAACA +
Preference number: 5 (lower is better)
Translates to: LRIGLWKTITLKRQRKKSVRIGL*ALRTET
Trigger: TGTTTCAGTGCGGAGTGCCAAGAGTCCTATCCTGAC...GCTCTTTTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp CAGGAGACCAGCCTGGGTAACACAGAGATCCAGTCTTTACGAAAAACTGCAACAGAGACAAGGTCTTTCTaGGAAGAGAGTGCCCAAGTA +
Preference number: 5 (lower is better)
Translates to: QETSLGNTEIQSLRKTATETRSF*EESAQV
Trigger: TACTTGGGCACTCTCTTCCAAGAAAGACCTTGTCTC...TGTTGCAGTTTTTCGTAAAGACTGGATCTCTGTGTTACCCAGGCTGGTCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGGTCAGATGCTCAGATTaGCTAGAGAACTCTGGTAGT +
Preference number: 5 (lower is better)
Translates to: KILESTGHECQISSTHIMVRCSD*LENSGS
Trigger: ACTACCAGAGTTCTCTAGCAAATCTGAGCATCTGAC...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp TGCGGATACAGACGAAGCAGGAATCAGGGACCCAATAAGTCTCAGGTGCTTTCAATCTTGGTGCATCGCTaGGCTTTAAAACAAACTGGG +
Preference number: 5 (lower is better)
Translates to: CGYRRSRNQGPNKSQVLSILVHR*ALKQTG
Trigger: CCCAGTTTGTTTTAAAGCCAAGCGATGCACCAAGAT...TGAAAGCACCTGAGACTTATTGGGTCCCTGATTCCTGCTTCGTCTGTATCCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS GCA 90 bp TATGTGTGTGAGAAGTTACCTTACCCATTGGGGTCAGTGTTCACCTaGTCACAGAAATTCTGGATAGCTGACCAATCCTGTTCCGACATG +
Preference number: 5 (lower is better)
Translates to: YVCEKLPYPLGSVFT*SQKFWIADQSCSDM
Trigger: CATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGGTAAGGTAACTTCTCACACACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566547.1
CDS-3UTR CAA 90 bp CAGTGGAACCTCCAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGTTTGGGGACAACACTTaGATCAGTTCGTTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: QWNLQIQITPDRLKYDLAFGDNT*ISSFRK
Trigger: TTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAA...CGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTGGAGGTTCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp CTTAAGAGACAGAGGAAAAAGAGCAGTCACGGAGGTAGGTCACGAAATGGGTCACAGGCCAAGCAGGACTaGTCAAACATACACATTCAA +
Preference number: 5 (lower is better)
Translates to: LKRQRKKSSHGGRSRNGSQAKQD*SNIHIQ
Trigger: TTGAATGTGTATGTTTGACAAGTCCTGCTTGGCCTG...TGACCCATTTCGTGACCTACCTCCGTGACTGCTCTTTTTCCTCTGTCTCTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp GACCCAATAAGTCTCAGGTGCTTTCAAGTAAGAGCATGTAGGTGGAAAGGGGCATGGCATTATCAGGGCTaGAAAGGACTTTATTGTGGC +
Preference number: 5 (lower is better)
Translates to: DPISLRCFQVRACRWKGAWHYQG*KGLYCG
Trigger: GCCACAATAAAGTCCTTTCAAGCCCTGATAATGCCA...TGCCCCTTTCCACCTACATGCTCTTACTTGAAAGCACCTGAGACTTATTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp GCCTGCCTCCTCTCCTCCTACCCCTATCCTGTCCAACACCTAAGCATAGTAGTAGATAAGGAAACATTTTaGCCCAGTCTTAAGTTCATG +
Preference number: 5 (lower is better)
Translates to: ACLLSSYPYPVQHLSIVVDKETF*PSLKFM
Trigger: CATGAACTTAAGACTGGGCAAAAATGTTTCCTTATC...TACTACTATGCTTAGGTGTTGGACAGGATAGGGGTAGGAGGAGAGGAGGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp TGTGTGGACGGGAAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGCCCACTTTTATACTCTaGACGCTGGGTAAGCATCTT +
Preference number: 5 (lower is better)
Translates to: CVDGKVLRIGLWKTITLKPTFIL*TLGKHL
Trigger: AAGATGCTTACCCAGCGTCAAGAGTATAAAAGTGGG...CTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTTCCCGTCCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp CAGTGGAACCTCCAGATACAGATAACCCCTGACAGACTGAAATACGATCTGGCGCACACACAAGAAGCATaGTCTAATGAAAATGGAGAC +
Preference number: 5 (lower is better)
Translates to: QWNLQIQITPDRLKYDLAHTQEA*SNENGD
Trigger: GTCTCCATTTTCATTAGACAATGCTTCTTGTGTGTG...CGCCAGATCGTATTTCAGTCTGTCAGGGGTTATCTGTATCTGGAGGTTCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp AAGATACTGGAAAGCACTGGCCATGAGTGCCAGATCTCCAGCACACACATCATGCTCCACCAATTAGTATaGGCAGATTTCCACTATATG +
Preference number: 5 (lower is better)
Translates to: KILESTGHECQISSTHIMLHQLV*ADFHYM
Trigger: CATATAGTGGAAATCTGCCAATACTAATTGGTGGAG...CATGATGTGTGTGCTGGAGATCTGGCACTCATGGCCAGTGCTTTCCAGTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp TTCTTGGAAGAGAGTGCCCAAGTAGATACTCTCTGCCCCAAGACTAACCAGGTCGTAGGCAAGCACTATTaGTATTCTAGAATATTGCCC +
Preference number: 5 (lower is better)
Translates to: FLEESAQVDTLCPKTNQVVGKHY*YSRILP
Trigger: GGGCAATATTCTAGAATACAAATAGTGCTTGCCTAC...GACCTGGTTAGTCTTGGGGCAGAGAGTATCTACTTGGGCACTCTCTTCCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp TCTTCCGGAAACCAGACTGTCCAACTGAAGAGTATTTCAATGACTCTTCCTTTAAAGAGCTTCCTTCTCTaGCGGAGACTGGATCTTGTG +
Preference number: 5 (lower is better)
Translates to: SSGNQTVQLKSISMTLPLKSFLL*RRLDLV
Trigger: CACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCTT...TAAAGGAAGAGTCATTGAAATACTCTTCAGTTGGACAGTCTGGTTTCCGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563494.5
ENST00000570111.5
CDS-3UTR CAA 90 bp CCCAGGTACTTTGGGGACAACACTTTGATCAGTTCGTTCAGGAAACGAAATTTGTTTGGGGACAACACTTaGATCAGTTCGTTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: PRYFGDNTLISSFRKRNLFGDNT*ISSFRK
Trigger: TTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAA...CAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAAGTACCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS-3UTR CAA 90 bp TGCAGGGAGGACATGATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAATCTCATTCACCCATTTaGACCAAAACCCTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: CREDMMWDYLENRPNDMQSHSPI*TKTLQR
Trigger: CCTCTGAAGGGTTTTGGTCAAAATGGGTGAATGAGA...TTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS-3UTR CAA 90 bp AAAGTCCTGAGGATTGGACTCTGGAAAACCATCACACTTAAGAGACAGAGGAAATGCTCTTTAGAAGCCTaGTCAGAAGCTTGGACTTTT +
Preference number: 5 (lower is better)
Translates to: KVLRIGLWKTITLKRQRKCSLEA*SEAWTF
Trigger: AAAAGTCCAAGCTTCTGACAAGGCTTCTAAAGAGCA...TTTCCTCTGTCTCTTAAGTGTGATGGTTTTCCAGAGTCCAATCCTCAGGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS-3UTR CAA 90 bp AGGGAGGACATGATGTGGGATTATTTAGAAAACAGGCCAAATGACATGCAACTAGTCAGATGCTCAGATTaGCTAGAGAACTCTGGTAGT +
Preference number: 5 (lower is better)
Translates to: REDMMWDYLENRPNDMQLVRCSD*LENSGS
Trigger: ACTACCAGAGTTCTCTAGCAAATCTGAGCATCTGAC...TAGTTGCATGTCATTTGGCCTGTTTTCTAAATAATCCCACATCATGTCCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567468.5
CDS GCA 72 bp TCGCTCCAGCCCCGACGCTGCGGCCGCGGGCGCCACTaGCTCTTCAGCCGCTGTAGCGTCCTGGCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SLQPRRCGRGRH*LFSRCSVLALS
Trigger: GGAGAGCGCCAGGACGCTACAGCGGCTGAAGAGGCAGTGGCGCCCGCGGCCGCAGCGTCGGGGCTGGAGCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309859.8
ENST00000563494.5
ENST00000566547.1
ENST00000568799.1
ENST00000569189.2
CDS GCA 72 bp GGGTCTGTGGTCACTGAGCCACAGCTCCAGCGACGCTaGCGGGCCCGGGGGACCCTGGGCCGACTCGGTTCC +
Preference number: 6 (lower is better)
Translates to: GSVVTEPQLQRR*RARGTLGRLGS
Trigger: GGAACCGAGTCGGCCCAGGGTCCCCCGGGCCCGGCAGCGTCGCTGGAGCTGTGGCTCAGTGACCACAGACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS GCA 72 bp GTCTGTGGCTTTGTTGAGCCACAGCTCCAGCGACGCTaGCGGGCCCGGGGGACCCTGGGCCGACTCGGTTCC +
Preference number: 6 (lower is better)
Translates to: VCGFVEPQLQRR*RARGTLGRLGS
Trigger: GGAACCGAGTCGGCCCAGGGTCCCCCGGGCCCGGCAGCGTCGCTGGAGCTGTGGCTCAACAAAGCCACAGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000309859.8
ENST00000562117.1
ENST00000562944.5
ENST00000563494.5
ENST00000566547.1
ENST00000567468.5
ENST00000568799.1
ENST00000569189.2
ENST00000570111.5
CDS GCA 72 bp GCAGGGCCTCCTGGTCGGGCGGGGCCTGCCCTGGCCTaGGGTACATGCTCAGCATCTCCTGCAGCACCTTCA +
Preference number: 6 (lower is better)
Translates to: AGPPGRAGPALA*GTCSASPAAPS
Trigger: TGAAGGTGCTGCAGGAGATGCTGAGCATGTACCGCAGGCCAGGGCAGGCCCCGCCCGACCAGGAGGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS GCA 72 bp CCTGGTCGGGCGGGGCCTGCCCTGGCCTGCGGTACATaGTCAGCATCTCCTGCAGCACCTTCACATGGCTTC +
Preference number: 6 (lower is better)
Translates to: PGRAGPALACGT*SASPAAPSHGF
Trigger: GAAGCCATGTGAAGGTGCTGCAGGAGATGCTGAGCATGTACCGCAGGCCAGGGCAGGCCCCGCCCGACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS GCA 72 bp CCAACCCCTCCCCAGAGGCAGAGATCTGGTATCCAGTaGCCAAGACCAGCCGGATGTCACCCACTGGCACTC +
Preference number: 6 (lower is better)
Translates to: PTPPQRQRSGIQ*PRPAGCHPLAL
Trigger: GAGTGCCAGTGGGTGACATCCGGCTGGTCTTGGGCACTGGATACCAGATCTCTGCCTCTGGGGAGGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568799.1
CDS GCA 72 bp CTCATCATGGTCAAGAGCAGCACCTGTACCTCTGGGTaGCCAGGGGCTCCCGTCTGGGAGAAGTGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: LIMVKSSTCTSG*PGAPVWEKWSR
Trigger: TCTGCTCCACTTCTCCCAGACGGGAGCCCCTGGGCACCCAGAGGTACAGGTGCTGCTCTTGACCATGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CCA 72 bp GTATCCAGTGCCCAAGACCAGCCGGATGTCACCCACTaGCACTCAAGAGGCAAGCTGAGCCTGCAGACCCCT +
Preference number: 6 (lower is better)
Translates to: VSSAQDQPDVTH*HSRGKLSLQTP
Trigger: AGGGGTCTGCAGGCTCAGCTTGCCTCTTGAGTGCCAGTGGGTGACATCCGGCTGGTCTTGGGCACTGGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568799.1
CDS CCA 72 bp CGGTACATGCTCAGCATCTCCTGCAGCACCTTCACATaGCTTCGCACTTCCTCCACCGCACTGACCCTCTTG +
Preference number: 6 (lower is better)
Translates to: RYMLSISCSTFT*LRTSSTALTLL
Trigger: CAAGAGGGTCAGTGCGGTGGAGGAAGTGCGAAGCCATGTGAAGGTGCTGCAGGAGATGCTGAGCATGTACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CCA 72 bp GCCAGGGCGCATGTGTGGGGCTGCTCACAGAAATTCTaGATAGCTGACCAATCCTGTTCCGACATGCTTGGG +
Preference number: 6 (lower is better)
Translates to: ARAHVWGCSQKF*IADQSCSDMLG
Trigger: CCCAAGCATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGCCCCACACATGCGCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566651.1
CDS CCA 72 bp CAAGTCAATCAGGGGGCAGGTCTTCATGCAGCCTGCTaGATTCTGAAAGACTCCAGGCCCAGCTCCAAGCAG +
Preference number: 6 (lower is better)
Translates to: QVNQGAGLHAAC*ILKDSRPSSKQ
Trigger: CTGCTTGGAGCTGGGCCTGGAGTCTTTCAGAATCCAGCAGGCTGCATGAAGACCTGCCCCCTGATTGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569182.1
CDS CAA 72 bp AAAGATGGCACCACAGTCCCCATCTGCGCAGGTCCATaGTCCACCTCCAAGTCAATCAGGGGGCAGGTCTTC +
Preference number: 6 (lower is better)
Translates to: KDGTTVPICAGP*STSKSIRGQVF
Trigger: GAAGACCTGCCCCCTGATTGACTTGGAGGTGGACAATGGACCTGCGCAGATGGGGACTGTGGTGCCATCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000569182.1
CDS GCA 72 bp GGACTGAATGCAGGAAGCTTGGAGCTGGATGCCGGCTaGAGCTTCACTCTCATTGACTTTGGCACAGCCACT +
Preference number: 6 (lower is better)
Translates to: GLNAGSLELDAG*SFTLIDFGTAT
Trigger: AGTGGCTGTGCCAAAGTCAATGAGAGTGAAGCTGCAGCCGGCATCCAGCTCCAAGCTTCCTGCATTCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CCA 72 bp CGGCCCTCCATCACCTGTTTGTACAGCAGAACTCCTTaGGTGAGGAGGTCATTTGCCTGGAGAATTTCCGCG +
Preference number: 6 (lower is better)
Translates to: RPSITCLYSRTP*VRRSFAWRISA
Trigger: CGCGGAAATTCTCCAGGCAAATGACCTCCTCACCCAAGGAGTTCTGCTGTACAAACAGGTGATGGAGGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CAA 72 bp CCGGCCCTCCATCACCTGTTTGTACAGCAGAACTCCTaGGGTGAGGAGGTCATTTGCCTGGAGAATTTCCGC +
Preference number: 6 (lower is better)
Translates to: PALHHLFVQQNS*GEEVICLENFR
Trigger: GCGGAAATTCTCCAGGCAAATGACCTCCTCACCCAAGGAGTTCTGCTGTACAAACAGGTGATGGAGGGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CAA 90 bp AAAGGTGACCCGGCCCTCCATCACCTGTTTGTACAGCAGAACTCCTaGGGTGAGGAGGTCATTTGCCTGGAGAATTTCCGCGAGTGCATC +
Preference number: 6 (lower is better)
Translates to: KGDPALHHLFVQQNS*GEEVICLENFRECI
Trigger: GATGCACTCGCGGAAATTCTCCAGGCAAATGACCTCCTCACCCAAGGAGTTCTGCTGTACAAACAGGTGATGGAGGGCCGGGTCACCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CAA 90 bp CTGGTCACTCTGTTTCCAAAGGTGACCCGGCCCTCCATCACCTGTTaGTACAGCAGAACTCCTTGGGTGAGGAGGTCATTTGCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: LVTLFPKVTRPSITC*YSRTPWVRRSFAWR
Trigger: TCTCCAGGCAAATGACCTCCTCACCCAAGGAGTTCTGCTGTACAAACAGGTGATGGAGGGCCGGGTCACCTTTGGAAACAGAGTGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CAA 90 bp AGCCTGCTGGATTCTGAAAGACTCCAGGCCCAGCTCCAAGCAGTCTaGATTCAGAAGGTCCAAGCCAGGGACCGCATTTCAACCAGTGCT +
Preference number: 6 (lower is better)
Translates to: SLLDSERLQAQLQAV*IQKVQARDRISTSA
Trigger: AGCACTGGTTGAAATGCGGTCCCTGGCTTGGACCTTCTGAATCAAGACTGCTTGGAGCTGGGCCTGGAGTCTTTCAGAATCCAGCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569182.1
CDS TCA 72 bp GCATGTGTGGGGCTGCTCACAGAAATTCTGGATAGCTaGCCAATCCTGTTCCGACATGCTTGGGTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: ACVGLLTEILDS*PILFRHAWVCG
Trigger: GCCACAGACCCAAGCATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGCCCCACACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566651.1
CDS TCA 72 bp AATGGATCGGGAGTTGTGTGGTCAATAACCGGCATCTaGGACGCAGCATCAACAGCCAGGGCACATCTTGGG +
Preference number: 6 (lower is better)
Translates to: NGSGVVWSITGI*DAASTARAHLG
Trigger: CCCAAGATGTGCCCTGGCTGTTGATGCTGCGTCTCAGATGCCGGTTATTGACCACACAACTCCCGATCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568922.1
CDS GCA 72 bp GGCGCATGTGTGGGGCCATTGGGGTCAGTGTTCACCTaGTCACAGAAATTCTGGATAGCTGACCAATCCTGT +
Preference number: 6 (lower is better)
Translates to: GACVGPLGSVFT*SQKFWIADQSC
Trigger: ACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGCCCCACACATGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309859.8
ENST00000562117.1
ENST00000562944.5
ENST00000563047.1
ENST00000567468.5
ENST00000568799.1
ENST00000569300.5
CDS GCA 72 bp CTCCAAGTCAATCAGGGGGCAGGTCTTCATGCAGCCTaGTGGATTCTGAAAGACTCTGGAGACAGGGATGTC +
Preference number: 6 (lower is better)
Translates to: LQVNQGAGLHAA*WILKDSGDRDV
Trigger: GACATCCCTGTCTCCAGAGTCTTTCAGAATCCAGCAGGCTGCATGAAGACCTGCCCCCTGATTGACTTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CCA 72 bp CAAGTCAATCAGGGGGCAGGTCTTCATGCAGCCTGCTaGATTCTGAAAGACTCTGGAGACAGGGATGTCTCC +
Preference number: 6 (lower is better)
Translates to: QVNQGAGLHAAC*ILKDSGDRDVS
Trigger: GGAGACATCCCTGTCTCCAGAGTCTTTCAGAATCCAGCAGGCTGCATGAAGACCTGCCCCCTGATTGACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CAA 72 bp GGGTCTGTGGCTTTGTCTTCAGGGCTAGGGCAGCTGTaGGCCAACTGCAGAGATAAAGAGAAAGGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: GSVALSSGLGQL*ANCRDKEKGSL
Trigger: CAAGCTGCCTTTCTCTTTATCTCTGCAGTTGGCCAACAGCTGCCCTAGCCCTGAAGACAAAGCCACAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569300.5
CDS CAA 90 bp GACATGCTTGGGTCTGTGGCTTTGTCTTCAGGGCTAGGGCAGCTGTaGGCCAACTGCAGAGATAAAGAGAAAGGCAGCTTGACCATGAGC +
Preference number: 6 (lower is better)
Translates to: DMLGSVALSSGLGQL*ANCRDKEKGSLTMS
Trigger: GCTCATGGTCAAGCTGCCTTTCTCTTTATCTCTGCAGTTGGCCAACAGCTGCCCTAGCCCTGAAGACAAAGCCACAGACCCAAGCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569300.5
CDS TCA 72 bp GCACCTTCACATGGCTTCGCACTTCCTCCACCGCACTaGCCCTCTTGGACACCTTCTCCGATTTTTCTTGTT +
Preference number: 6 (lower is better)
Translates to: APSHGFALPPPH*PSWTPSPIFLV
Trigger: AACAAGAAAAATCGGAGAAGGTGTCCAAGAGGGTCAGTGCGGTGGAGGAAGTGCGAAGCCATGTGAAGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS TCA 72 bp ATTCTGAAAGACTCTGGAGACAGGGATGTCTCCCAATaGGCTGGTCACTCTGTTTCCAAAGGTGACCCGGCC +
Preference number: 6 (lower is better)
Translates to: ILKDSGDRDVSQ*AGHSVSKGDPA
Trigger: GGCCGGGTCACCTTTGGAAACAGAGTGACCAGCTCATTGGGAGACATCCCTGTCTCCAGAGTCTTTCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS GCA 72 bp GGACTGAATGCAGGAAGCTTGGAGCTGGATGCCGGCTaGAGCTTCACTCTCATTGACTATCAGGGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: GLNAGSLELDAG*SFTLIDYQGKK
Trigger: TTTCTTCCCCTGATAGTCAATGAGAGTGAAGCTGCAGCCGGCATCCAGCTCCAAGCTTCCTGCATTCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568922.1
CDS GCA 72 bp GCTTTGTCTTCAGGGCTAGGGCAGCTGTTGGCCAACTaGAGAGATAAAGAGAAAGGCAGCTTGACCATGAGC +
Preference number: 6 (lower is better)
Translates to: ALSSGLGQLLAN*RDKEKGSLTMS
Trigger: GCTCATGGTCAAGCTGCCTTTCTCTTTATCTCTGCAGTTGGCCAACAGCTGCCCTAGCCCTGAAGACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569300.5
CDS CAA 72 bp ACATGGCTTCGCACTTCCTCCACCGCACTGACCCTCTaGGACACCTTCTCCGATTTTTCTTGTTCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: TWLRTSSTALTL*DTFSDFSCSSL
Trigger: CAAGGAGGAACAAGAAAAATCGGAGAAGGTGTCCAAGAGGGTCAGTGCGGTGGAGGAAGTGCGAAGCCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567201.5
CDS CAA 72 bp CTGTTTCCAAAGGTGACCCGGCCCTCCATCACCTGTTaGTACAGCAGAACTCCTTGGGTGAGGAGGTCATTT +
Preference number: 6 (lower is better)
Translates to: LFPKVTRPSITC*YSRTPWVRRSF
Trigger: AAATGACCTCCTCACCCAAGGAGTTCTGCTGTACAAACAGGTGATGGAGGGCCGGGTCACCTTTGGAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CAA 72 bp GATTCTGAAAGACTCCAGGCCCAGCTCCAAGCAGTCTaGATTCAGAAGGTCCAAGCCAGGGACCGCATTTCA +
Preference number: 6 (lower is better)
Translates to: DSERLQAQLQAV*IQKVQARDRIS
Trigger: TGAAATGCGGTCCCTGGCTTGGACCTTCTGAATCAAGACTGCTTGGAGCTGGGCCTGGAGTCTTTCAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569182.1
CDS CAA 90 bp AGCACCTTCACATGGCTTCGCACTTCCTCCACCGCACTGACCCTCTaGGACACCTTCTCCGATTTTTCTTGTTCCTCCTTGACCAAATTC +
Preference number: 6 (lower is better)
Translates to: STFTWLRTSSTALTL*DTFSDFSCSSLTKF
Trigger: GAATTTGGTCAAGGAGGAACAAGAAAAATCGGAGAAGGTGTCCAAGAGGGTCAGTGCGGTGGAGGAAGTGCGAAGCCATGTGAAGGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS TCA 72 bp GTCAGTGTTCACCTGCTCACAGAAATTCTGGATAGCTaGCCAATCCTGTTCCGACATGCTTGGGTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: VSVHLLTEILDS*PILFRHAWVCG
Trigger: GCCACAGACCCAAGCATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000309859.8
ENST00000562117.1
ENST00000562944.5
ENST00000563494.5
ENST00000566547.1
ENST00000567468.5
ENST00000568799.1
ENST00000569189.2
ENST00000569300.5
ENST00000570111.5
CDS TCA 72 bp TCACTCTCATTGACTTTGGCACAGCCACTTGAAACATaGTATCCCAGACAGGCTGGGGAGCCGTGCTCATCA +
Preference number: 6 (lower is better)
Translates to: SLSLTLAQPLET*YPRQAGEPCSS
Trigger: TGATGAGCACGGCTCCCCAGCCTGTCTGGGATATCATGTTTCAAGTGGCTGTGCCAAAGTCAATGAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS TCA 72 bp ATTCTGAAAGACTCCAGGCCCAGCTCCAAGCAGTCTTaGTTCAGAAGGTCCAAGCCAGGGACCGCATTTCAA +
Preference number: 6 (lower is better)
Translates to: ILKDSRPSSKQS*FRRSKPGTAFQ
Trigger: TTGAAATGCGGTCCCTGGCTTGGACCTTCTGAATCAAGACTGCTTGGAGCTGGGCCTGGAGTCTTTCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569182.1
CDS TCA 72 bp GATCCTTGCCTAGAGAGCTTAACCCTAAAACAGTCTTaGGAGACAAAGGCCTACACTCAGTGTGGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: DPCLESLTLKQS*ETKAYTQCGVP
Trigger: GGGCACCCCACACTGAGTGTAGGCCTTTGTCTCTCAAGACTGTTTTAGGGTTAAGCTCTCTAGGCAAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566547.1
CDS GCA 72 bp CTTTCAGGACAGCAGCCTGAAGGTCCTCGGGGTGGTTaGTCTTTAGAAGCCTTGTCAGAAGCTTGGACTTTT +
Preference number: 6 (lower is better)
Translates to: LSGQQPEGPRGG*SLEALSEAWTF
Trigger: AAAAGTCCAAGCTTCTGACAAGGCTTCTAAAGAGCAACCACCCCGAGGACCTTCAGGCTGCTGTCCTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567468.5
CDS CCA 72 bp TACAGCAGAACTCCTTGGGTGAGGAGGTCATTTGCCTaGAGAATTTCCGCGAGTGCATCATCGTCATCAGTG +
Preference number: 6 (lower is better)
Translates to: YSRTPWVRRSFA*RISASASSSSV
Trigger: CACTGATGACGATGATGCACTCGCGGAAATTCTCCAGGCAAATGACCTCCTCACCCAAGGAGTTCTGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS CCA 72 bp TGTGAAAAGTTAGGCTGCGCCCAAGACAGCCAGGTCTaGGAAGTCTTTCACTTCTCCTACTTCGCTGAAAGG +
Preference number: 6 (lower is better)
Translates to: CEKLGCAQDSQV*EVFHFSYFAER
Trigger: CCTTTCAGCGAAGTAGGAGAAGTGAAAGACTTCCCAGACCTGGCTGTCTTGGGCGCAGCCTAACTTTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000568922.1
CDS CAA 72 bp CGATCCTTGCCTAGAGAGCTTAACCCTAAAACAGTCTaGAGAGACAAAGGCCTACACTCAGTGTGGGGTGCC +
Preference number: 6 (lower is better)
Translates to: RSLPRELNPKTV*RDKGLHSVWGA
Trigger: GGCACCCCACACTGAGTGTAGGCCTTTGTCTCTCAAGACTGTTTTAGGGTTAAGCTCTCTAGGCAAGGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566547.1
CDS CAA 90 bp GGTGCCCCCAGAGTCAACTATGTGTGTGAGAAGTTACCTTACCCATaGGGGTCAGTGTTCACCTGCTCACAGAAATTCTGGATAGCTGAC +
Preference number: 6 (lower is better)
Translates to: GAPRVNYVCEKLPYP*GSVFTCSQKFWIAD
Trigger: GTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGGTAAGGTAACTTCTCACACACATAGTTGACTCTGGGGGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566547.1
CDS TCA 72 bp CTGCTGGGCTTAACAGACTCCAAAGGGACAAACACTTaGGCCAGAGGTGTATTCTGTGAAGATGGGGAAGGA +
Preference number: 6 (lower is better)
Translates to: LLGLTDSKGTNT*ARGVFCEDGEG
Trigger: TCCTTCCCCATCTTCACAGAATACACCTCTGGCTCAAGTGTTTGTCCCTTTGGAGTCTGTTAAGCCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS TCA 72 bp GTCAGTGTTCACCTGCTCACAGAAATTCTGGATAGCTaGCCAATCCTGTTCCGACATGCTTGGGTCTGTGGT +
Preference number: 6 (lower is better)
Translates to: VSVHLLTEILDS*PILFRHAWVCG
Trigger: ACCACAGACCCAAGCATGTCGGAACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563047.1
CDS GCA 72 bp TTAACCGGTTTGCAGCCTGAAGGTCCTCGGGGTGGTTaGTCTTTAGAAGCCTTGTCAGAAGCTTGGACTTTT +
Preference number: 6 (lower is better)
Translates to: LTGLQPEGPRGG*SLEALSEAWTF
Trigger: AAAAGTCCAAGCTTCTGACAAGGCTTCTAAAGAGCAACCACCCCGAGGACCTTCAGGCTGCAAACCGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567201.5
CDS GCA 72 bp TTTGTACAGCAGAACTCCTTGGGTGAGGAGGTCATTTaGCTGGAGAATTTCCGCGAGTGCATCATCGTCATC +
Preference number: 6 (lower is better)
Translates to: FVQQNSLGEEVI*LENFRECIIVI
Trigger: GATGACGATGATGCACTCGCGGAAATTCTCCAGGCAAATGACCTCCTCACCCAAGGAGTTCTGCTGTACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309859.8
CDS GCA 72 bp ATGTGTGGGGCTTACCCATTGGGGTCAGTGTTCACCTaGTCACAGAAATTCTGGATAGCTGACCAATCCTGT +
Preference number: 6 (lower is better)
Translates to: MCGAYPLGSVFT*SQKFWIADQSC
Trigger: ACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGGTAAGCCCCACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563494.5
ENST00000569189.2
ENST00000570111.5
CDS CAA 90 bp TCTCCTACTTCGCTGAAAGGCTGTCCACCTTGGTTGAATGTCAGCTaGTACCGTAAGCGGATAGGTTCTTTGTGTGGATTGTCAAGCAGC +
Preference number: 6 (lower is better)
Translates to: SPTSLKGCPPWLNVS*YRKRIGSLCGLSSS
Trigger: GCTGCTTGACAATCCACACAAAGAACCTATCCGCTTACGGTACAAGCTGACATTCAACCAAGGTGGACAGCCTTTCAGCGAAGTAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000568922.1
CDS TCA 72 bp TCCTTGACCAAATTCTTGATTAACCGGTTTGCAGCCTaGAGGTCCTCGGGGTGGTTGCTCTTTAGAAGCCTT +
Preference number: 6 (lower is better)
Translates to: SLTKFLINRFAA*RSSGWLLFRSL
Trigger: AAGGCTTCTAAAGAGCAACCACCCCGAGGACCTTCAGGCTGCAAACCGGTTAATCAAGAATTTGGTCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000567201.5
CDS CCA 72 bp TTCACTTCTCCTACTTCGCTGAAAGGCTGTCCACCTTaGTTGAATGTCAGCTTGTACCGTAAGCGGATAGGT +
Preference number: 6 (lower is better)
Translates to: FTSPTSLKGCPP*LNVSLYRKRIG
Trigger: ACCTATCCGCTTACGGTACAAGCTGACATTCAACCAAGGTGGACAGCCTTTCAGCGAAGTAGGAGAAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000568922.1
CDS CCA 72 bp AAAGGATCTAAGAGGCCTTTCCTTCCACACACAGAATaGATCGGGAGTTGTGTGGTCAATAACCGGCATCTG +
Preference number: 6 (lower is better)
Translates to: KGSKRPFLPHTE*IGSCVVNNRHL
Trigger: CAGATGCCGGTTATTGACCACACAACTCCCGATCCATTCTGTGTGTGGAAGGAAAGGCCTCTTAGATCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568922.1
CDS CAA 72 bp TCGCTGAAAGGCTGTCCACCTTGGTTGAATGTCAGCTaGTACCGTAAGCGGATAGGTTCTTTGTGTGGATTG +
Preference number: 6 (lower is better)
Translates to: SLKGCPPWLNVS*YRKRIGSLCGL
Trigger: CAATCCACACAAAGAACCTATCCGCTTACGGTACAAGCTGACATTCAACCAAGGTGGACAGCCTTTCAGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000568922.1
CDS CAA 72 bp ACTTCTCCTACTTCGCTGAAAGGCTGTCCACCTTGGTaGAATGTCAGCTTGTACCGTAAGCGGATAGGTTCT +
Preference number: 6 (lower is better)
Translates to: TSPTSLKGCPPW*NVSLYRKRIGS
Trigger: AGAACCTATCCGCTTACGGTACAAGCTGACATTCAACCAAGGTGGACAGCCTTTCAGCGAAGTAGGAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000568922.1
CDS CAA 90 bp AAGTCTTTCACTTCTCCTACTTCGCTGAAAGGCTGTCCACCTTGGTaGAATGTCAGCTTGTACCGTAAGCGGATAGGTTCTTTGTGTGGA +
Preference number: 6 (lower is better)
Translates to: KSFTSPTSLKGCPPW*NVSLYRKRIGSLCG
Trigger: TCCACACAAAGAACCTATCCGCTTACGGTACAAGCTGACATTCAACCAAGGTGGACAGCCTTTCAGCGAAGTAGGAGAAGTGAAAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309859.8
ENST00000568922.1
CDS GCA 72 bp GAGAAGTTACCTTACCCATTGGGGTCAGTGTTCACCTaGTCACAGAAATTCTGGATAGCTGACCAATCCTGT +
Preference number: 6 (lower is better)
Translates to: EKLPYPLGSVFT*SQKFWIADQSC
Trigger: ACAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGGTAAGGTAACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566547.1
CDS CCA 72 bp GAGTCAACTATGTGTGTGAGAAGTTACCTTACCCATTaGGGTCAGTGTTCACCTGCTCACAGAAATTCTGGA +
Preference number: 6 (lower is better)
Translates to: ESTMCVRSYLTH*GQCSPAHRNSG
Trigger: TCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGGTAAGGTAACTTCTCACACACATAGTTGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566547.1
CDS CAA 72 bp CCACTTCCCTTGAAAAGGGATGGATGTTATCTCACATaGGCCAAGTGTCTCATATCCCAGGATACAAGTTCC +
Preference number: 6 (lower is better)
Translates to: PLPLKRDGCYLT*AKCLISQDTSS
Trigger: GGAACTTGTATCCTGGGATATGAGACACTTGGCCAATGTGAGATAACATCCATCCCTTTTCAAGGGAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568922.1
CDS GCA 72 bp AACATTGCCCATAGGACTACCGTAAGAAGTAGAGACTaGAGGTCATATTTTTGTCTGTCTCGAATCTTTTCC +
Preference number: 6 (lower is better)
Translates to: NIAHRTTVRSRD*RSYFCLSRIFS
Trigger: GGAAAAGATTCGAGACAGACAAAAATATGACCTGCAGTCTCTACTTCTTACGGTAGTCCTATGGGCAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568922.1