RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GEN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000178295

Ensembl transcript IDs: ENST00000317402.11, ENST00000381254.7, ENST00000524465.5, ENST00000528873.2, ENST00000532257.1, ENST00000534451.2, ENST00000534669.1, ENST00000614478.1

Found 455 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTCGCTTGCATGCCGCTCAACACCTGCTGTGCAGGCCGGTTCCTaGCAGGTGATGGACTGGTACCTGTCCATAGCCCAGGGGTTGGGG +
Preference number: 1 (lower is better)
Translates to: FSLACRSTPAVQAGS*QVMDWYLSIAQGLG
Trigger: CCCCAACCCCTGGGCTATGGACAGGTACCAGTCCATCACCTGTCAGGAACCGGCCTGCACAGCAGGTGTTGAGCGGCATGCAAGCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR GCA 90 bp ACCGCTGATCTGACAGGAGGCAGAGCTCAGGCGGTAATTCTCGCTTaGATGCCGCTCAACACCTGCTGTGCAGGCCGGTTCCTGACAGGT +
Preference number: 1 (lower is better)
Translates to: TADLTGGRAQAVILA*MPLNTCCAGRFLTG
Trigger: ACCTGTCAGGAACCGGCCTGCACAGCAGGTGTTGAGCGGCATGCAAGCGAGAATTACCGCCTGAGCTCTGCCTCCTGTCAGATCAGCGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR GCA 90 bp CCCACAGAAGGGTCAGCCTACTTTGCTGATAACTCTGCCCTCCATTaGCAAACAGGCAACTTAGTGAATTTATCTGGCCTGGGGCTAACT +
Preference number: 1 (lower is better)
Translates to: PTEGSAYFADNSALH*QTGNLVNLSGLGLT
Trigger: AGTTAGCCCCAGGCCAGATAAATTCACTAAGTTGCCTGTTTGGCAATGGAGGGCAGAGTTATCAGCAAAGTAGGCTGACCCTTCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 90 bp ATTACACAAAGCCCAAAGCAGTTAGGCCAGAGCAGGGCCTTAGCATaGAGCCATCAGAAAGAAACCAATTACAGGATCCTAGCAGCTGGA +
Preference number: 1 (lower is better)
Translates to: ITQSPKQLGQSRALA*SHQKETNYRILAAG
Trigger: TCCAGCTGCTAGGATCCTGTAATTGGTTTCTTTCTGATGGCTCCATGCTAAGGCCCTGCTCTGGCCTAACTGCTTTGGGCTTTGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 90 bp TTAAGTGCAGCCACTGCTGGTACAGGCTCCATGGGTGGGGCGTTGTaGAGAATTGTCATTCATGCATCTAGTAGTTACTGTGTCAAACAC +
Preference number: 1 (lower is better)
Translates to: LSAATAGTGSMGGAL*RIVIHASSSYCVKH
Trigger: GTGTTTGACACAGTAACTACTAGATGCATGAATGACAATTCTCCACAACGCCCCACCCATGGAGCCTGTACCAGCAGTGGCTGCACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 90 bp AGCATGGAGCCATCAGAAAGAAACCAATTACAGGATCCTAGCAGCTaGAGGCAGATCTTTGGCAGAGTATTTCAAAGGGAAGCAAGGCAT +
Preference number: 1 (lower is better)
Translates to: SMEPSERNQLQDPSS*RQIFGRVFQREARH
Trigger: ATGCCTTGCTTCCCTTTGAAATACTCTGCCAAAGATCTGCCTCCAGCTGCTAGGATCCTGTAATTGGTTTCTTTCTGATGGCTCCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR TCA 90 bp GTTAGCAATAATTACATCAGAGCAGTTACTGCAACCAGTATTGCTTaGAAACTAAAAGGCAAAGGGACTTGTAGTCTCCCCTCACCTGGG +
Preference number: 1 (lower is better)
Translates to: VSNNYIRAVTATSIA*KLKGKGTCSLPSPG
Trigger: CCCAGGTGAGGGGAGACTACAAGTCCCTTTGCCTTTTAGTTTTCAAGCAATACTGGTTGCAGTAACTGCTCTGATGTAATTATTGCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR TCA 90 bp CTTCCTCATTCTGGAACTGGGATTGTTTCCACTTTTAGGCTATTATaGATAACGCTGCTATGGACATTTGTGCACAGGTTTTTATGTGGA +
Preference number: 1 (lower is better)
Translates to: LPHSGTGIVSTFRLL*ITLLWTFVHRFLCG
Trigger: TCCACATAAAAACCTGTGCACAAATGTCCATAGCAGCGTTATTCATAATAGCCTAAAAGTGGAAACAATCCCAGTTCCAGAATGAGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR TCA 90 bp GCTGCATTCAGTTTGAATCCAAAATCTGATAGTGCTCTTTCCAAATaGTGGTATCGGACACAGCTACAATTTACTGAGTCCCTAGAATGT +
Preference number: 1 (lower is better)
Translates to: AAFSLNPKSDSALSK*WYRTQLQFTESLEC
Trigger: ACATTCTAGGGACTCAGTAAATTGTAGCTGTGTCCGATACCATCATTTGGAAAGAGCACTATCAGATTTTGGATTCAAACTGAATGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR TCA 90 bp TGGCAGAGTATTTCAAAGGGAAGCAAGGCATCCTCAACAAGACAATaGAGTGATGAGCAAATACGTAAGCAGCAACTTAAAAGATTTGAT +
Preference number: 1 (lower is better)
Translates to: WQSISKGSKASSTRQ*SDEQIRKQQLKRFD
Trigger: ATCAAATCTTTTAAGTTGCTGCTTACGTATTTGCTCATCACTTCATTGTCTTGTTGAGGATGCCTTGCTTCCCTTTGAAATACTCTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 90 bp AGACAGTTGGTTCAAAGACTGTTTCCTTTTCCCATTGAATTGTCTTaGCACTCTGGTTTAAAATCAACTGACCATAAACGTGAAGGCTTT +
Preference number: 1 (lower is better)
Translates to: RQLVQRLFPFPIELS*HSGLKSTDHKREGF
Trigger: AAAGCCTTCACGTTTATGGTCAGTTGATTTTAAACCAGAGTGCCAAGACAATTCAATGGGAAAAGGAAACAGTCTTTGAACCAACTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR GCA 90 bp ACCCGATATACCTGTGAACTTCTGGGGATACATAAGGAGTTACTTTaGTCAGTTTATTCAGCCATTACGAGCATGATTTTTACTAAACAT +
Preference number: 1 (lower is better)
Translates to: TRYTCELLGIHKELL*SVYSAITSMIFTKH
Trigger: ATGTTTAGTAAAAATCATGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAAGTTCACAGGTATATCGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 90 bp ATGACCACATCAAGGAACAAGAACATGGAATGCTTTAAAAAGAATTaGTATAACCTGGACAATGAAAACAGAGAAATCCTTGAGGAGGAG +
Preference number: 1 (lower is better)
Translates to: MTTSRNKNMECFKKN*YNLDNENREILEEE
Trigger: CTCCTCCTCAAGGATTTCTCTGTTTTCATTGTCCAGGTTATACCAATTCTTTTTAAAGCATTCCATGTTCTTGTTCCTTGATGTGGTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 90 bp TTTGATTTTCCAAATCTTTTTCCACCCGATATACCTGTGAACTTCTaGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTA +
Preference number: 1 (lower is better)
Translates to: FDFPNLFPPDIPVNF*GYIRSYFAQFIQPL
Trigger: TAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAAGTTCACAGGTATATCGGGTGGAAAAAGATTTGGAAAATCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCGCGGTAATTCTCGCTTaGATGCCGCTCAACACCTGC +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCAVILA*MPLNTC
Trigger: GCAGGTGTTGAGCGGCATGCAAGCGAGAATTACCGC...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCTGAGGCATGTGAATTaGGTGAACCTGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCLRHVN*VNLGGR
Trigger: TCTGCCTCCCAGGTTCACGCAATTCACATGCCTCAG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAAGTGCAGCCACTGCTaGTACAGGCTCCATGGGTGG +
Preference number: 2 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGKCSHC*YRLHGW
Trigger: CCACCCATGGAGCCTGTACCAGCAGTGGCTGCACTT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 90 bp CAGCCACTGCTGGTACAGGCTCCATGGGTGGGGCGTTGTGGAGAATaGTCATTCATGCATCTAGTAGTTACTGTGTCAAACACTGTTCTA +
Preference number: 2 (lower is better)
Translates to: QPLLVQAPWVGRCGE*SFMHLVVTVSNTVL
Trigger: TAGAACAGTGTTTGACACAGTAACTACTAGATGCATGAATGACAATTCTCCACAACGCCCCACCCATGGAGCCTGTACCAGCAGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 90 bp AGGTTAAGTGCAGCCACTGCTGGTACAGGCTCCATGGGTGGGGCGTaGTGGAGAATTGTCATTCATGCATCTAGTAGTTACTGTGTCAAA +
Preference number: 2 (lower is better)
Translates to: RLSAATAGTGSMGGA*WRIVIHASSSYCVK
Trigger: TTTGACACAGTAACTACTAGATGCATGAATGACAATTCTCCACAACGCCCCACCCATGGAGCCTGTACCAGCAGTGGCTGCACTTAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 90 bp TTTAGACTCTTCACCTTCAGAAAGCAAGCATCTTGGCAGGGCGTCTaGAAGTGGCTAAAGGCGACTAGGTATCAAGCTAATCCACCCGGT +
Preference number: 2 (lower is better)
Translates to: FRLFTFRKQASWQGV*KWLKATRYQANPPG
Trigger: ACCGGGTGGATTAGCTTGATACCTAGTCGCCTTTAGCCACTTCAAGACGCCCTGCCAAGATGCTTGCTTTCTGAAGGTGAAGAGTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGGCGGTAATTCTCGCTTaGATGCCGCTCAACACCTGC +
Preference number: 2 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGAVILA*MPLNTC
Trigger: GCAGGTGTTGAGCGGCATGCAAGCGAGAATTACCGC...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCAGCAGGGCCTTAGCATaGAGCCATCAGAAAGAAACC +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCSRALA*SHQKET
Trigger: GGTTTCTTTCTGATGGCTCCATGCTAAGGCCCTGCT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCGTATGCCTGACAAGATaGCTCAAGCCATGCTACCCA +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCVCLTR*LKPCYP
Trigger: TGGGTAGCATGGCTTGAGCCATCTTGTCAGGCATAC...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGATGGGTGGATCGCTTaGGGCCAGGAGTTCATGACT +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQDGWIA*GQEFMT
Trigger: AGTCATGAACTCCTGGCCTCAAGCGATCCACCCATC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCTTATAGGATGCCATTaGTCACTGTATCTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCLIGCH*SLYLQG
Trigger: GCCCTGGAGATACAGTGATCAATGGCATCCTATAAG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAACTCCCACCCTCACACTaGCCCCTACTAGTGTTACTG +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQLPPSH*PLLVLL
Trigger: CAGTAACACTAGTAGGGGGCAGTGTGAGGGTGGGAG...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCGAGGACCACTTTCGTaGAAAACAGTTTTTCCACGG +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCRGPLS*KTVFPR
Trigger: CCGTGGAAAAACTGTTTTCCACGAAAGTGGTCCTCG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCAGGATCCTAGCAGCTaGAGGCAGATCTTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGQDPSS*RQIFGR
Trigger: TCTGCCAAAGATCTGCCTCCAGCTGCTAGGATCCTG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCCTTGTGAGCCATGCTaGAGTACTAAGGCCAGATTC +
Preference number: 2 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGPCEPC*STKARF
Trigger: GAATCTGGCCTTAGTACTTCAGCATGGCTCACAAGG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCATCCTGGAGTGAAGTaGAGTGGCACTATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGHPGVK*SGTISA
Trigger: AGCTGAGATAGTGCCACTGCACTTCACTCCAGGATG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCATGGCCTTCCAAAGTaGAAGAGCACACTAAAGGTA +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCHGLPK*KSTLKV
Trigger: TACCTTTAGTGTGCTCTTCCACTTTGGAAGGCCATG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCACGGCCACCATGTGTaGCCAGATAGAGATTTTATA +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCHGHHV*PDRDFI
Trigger: TATAAAATCTCTATCTGGCCACACATGGTGGCCGTG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 90 bp CAGAAAGAAACCAATTACAGGATCCTAGCAGCTGGAGGCAGATCTTaGGCAGAGTATTTCAAAGGGAAGCAAGGCATCCTCAACAAGACA +
Preference number: 2 (lower is better)
Translates to: QKETNYRILAAGGRS*AEYFKGKQGILNKT
Trigger: TGTCTTGTTGAGGATGCCTTGCTTCCCTTTGAAATACTCTGCCAAAGATCTGCCTCCAGCTGCTAGGATCCTGTAATTGGTTTCTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTGCAGAAAAGCCTGTTaGGCTATTTTGCCCATTTCA +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCCRKAC*AILPIS
Trigger: TGAAATGGGCAAAATAGCTCAACAGGCTTTTCTGCA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTATCACAGCCACGACTaGACAAATCAGAATAAGCAG +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCYHSHD*TNQNKQ
Trigger: CTGCTTATTCTGATTTGTTCAGTCGTGGCTGTGATA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATGGTCTAGATGGTCCTaGACTATCACAGCCACGACT +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQWSRWS*TITATT
Trigger: AGTCGTGGCTGTGATAGTTCAGGACCATCTAGACCA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGAAGCTAGGTATGCCTaGCAAGATGGCTCAAGCCAT +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQEARYA*QDGSSH
Trigger: ATGGCTTGAGCCATCTTGTCAGGCATACCTAGCTTC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTGTCAATGGTGGCAGTaGCTTCACAGATATCAAAAC +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCCQWWQ*LHRYQN
Trigger: GTTTTGATATCTGTGAAGTCACTGCCACCATTGACA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAACATCCTGGAGTGAAGTaGAGTGGCACTATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQHPGVK*SGTISA
Trigger: AGCTGAGATAGTGCCACTGCACTTCACTCCAGGATG...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTCCCCTTCCTCATTCTaGAACTGGGATTGTTTCCAC +
Preference number: 2 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGSPSSF*NWDCFH
Trigger: GTGGAAACAATCCCAGTTCCAGAATGAGGAAGGGGA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAATGATGAGGGGGAGATaGCTGTGGGATGAAGCTGTT +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQMMRGR*LWDEAV
Trigger: AACAGCTTCATCCCACAGCCATCTCCCCCTCATCAT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGCTGAAGAGACAAGTTaGGGCCAGGCTGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIAEETS*GQAASA
Trigger: GGCTGAGGCAGCCTGGCCCCAACTTGTCTCTTCAGC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAGCTATATAGCAAAATaGACTCAGACTGGCCACTCC +
Preference number: 2 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGSYIAK*TQTGHS
Trigger: GGAGTGGCCAGTCTGAGTTCATTTTGCTATATAGCT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCACAGCTACAATTTACTaGGTCCCTAGAATGTGTCAA +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCTATIY*VPRMCQ
Trigger: TTGACACATTCTAGGGACTCAGTAAATTGTAGCTGT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAGTGCTCTTTCCAAATaGTGGTATCGGACACAGCTA +
Preference number: 2 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGSALSK*WYRTQL
Trigger: TAGCTGTGTCCGATACCATCATTTGGAAAGAGCACT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAAAGGACTTAGTCCCTaGCCTCATCAAGTCTGCATT +
Preference number: 2 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGKGLSP*PHQVCI
Trigger: AATGCAGACTTGATGAGGGCAGGGACTAAGTCCTTT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTCTTGGGTATATACCTaGGAGAGGAATTGCTGGATC +
Preference number: 2 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGSWVYT*ERNCWI
Trigger: GATCCAGCAATTCCTCTCCCAGGTATATACCCAAGA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAACGAGGACCACTTTCGTaGAAAACAGTTTTTCCACGG +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQRGPLS*KTVFPR
Trigger: CCGTGGAAAAACTGTTTTCCACGAAAGTGGTCCTCG...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACTGGTACAGGCTCCATaGGTGGGGCGTTGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILVQAP*VGRCGE
Trigger: TTCTCCACAACGCCCCACCCATGGAGCCTGTACCAG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCAGCCATTACGAGCATaGTTTTTACTAAACATACTG +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCQPLRA*FLLNIL
Trigger: CAGTATGTTTAGTAAAAATCATGCTCGTAATGGCTG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCAGTCCTTAAAGAGTTaGGATGATACAAGGTTTGTA +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCQSLKS*DDTRFV
Trigger: TACAAACCTTGTATCATCTCAACTCTTTAAGGACTG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCCTTTTCAATCTGGATaGCTCTCTAGAATTTTTGAG +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCPFQSG*LSRIFE
Trigger: CTCAAAAATTCTAGAGAGGCATCCAGATTGAAAAGG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTGCTATGGACATTTGTaGACAGGTTTTTATGTGGAT +
Preference number: 2 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCCYGHL*TGFYVD
Trigger: ATCCACATAAAAACCTGTGCACAAATGTCCATAGCA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAATGGAACACCTTGCATaGCCTTCCAAAGTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAMEHLA*PSKVEE
Trigger: CTCTTCCACTTTGGAAGGCCATGCAAGGTGTTCCAT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAACTGGAGGCAGATCTTTaGCAGAGTATTTCAAAGGGA +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQLEADL*QSISKG
Trigger: TCCCTTTGAAATACTCTGCCAAAGATCTGCCTCCAG...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACTGAGGCATGTGAATTaGGTGAACCTGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILRHVN*VNLGGR
Trigger: TCTGCCTCCCAGGTTCACGCAATTCACATGCCTCAG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAAGATGGCTCAAGCCATaGTACCCAAAAGGAAAAAGT +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQRWLKP*YPKGKS
Trigger: ACTTTTTCCTTTTGGGTAGCATGGCTTGAGCCATCT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTCCGCAAGGTTAAGTaGAGCCACTGCTGGTACAGG +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIFRKVK*SHCWYR
Trigger: CCTGTACCAGCAGTGGCTGCACTTAACCTTGCGGAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACATGGCCTTCCAAAGTaGAAGAGCACACTAAAGGTA +
Preference number: 2 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAHGLPK*KSTLKV
Trigger: TACCTTTAGTGTGCTCTTCCACTTTGGAAGGCCATG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGATACCTGTGAACTTCTaGGGATACATAAGGAGTTAC +
Preference number: 2 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGIPVNF*GYIRSY
Trigger: GTAACTCCTTATGTATCCCCAGAAGTTCACAGGTAT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATCCCTGCTACTCAGGTaGCTGAGGCATGTGAATTGC +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQISLLLR*LRHVNC
Trigger: GCAATTCACATGCCTCAGCCACCTGAGTAGCAGGGA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACTTTTTCGCCCATCCTaGAGTGAAGTGCAGTGGCAC +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILFRPS*SEVQWH
Trigger: GTGCCACTGCACTTCACTCCAGGATGGGCGAAAAAG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAACAGCTACAATTTACTaGGTCCCTAGAATGTGTCAA +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQTATIY*VPRMCQ
Trigger: TTGACACATTCTAGGGACTCAGTAAATTGTAGCTGT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATGGCTGCATTCAGTTTaGATCCAAAATCTGATAGTG +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQWLHSV*IQNLIV
Trigger: CACTATCAGATTTTGGATTCAAACTGAATGCAGCCA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATTTTTCCAAAGTGGCTaGCCCATTTTACATTCCTAC +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQFFQSG*PILHSY
Trigger: GTAGGAATGTAAAATGGGGCAGCCACTTTGGAAAAA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAATACCTGTGAACTTCTaGGGATACATAAGGAGTTAC +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQIPVNF*GYIRSY
Trigger: GTAACTCCTTATGTATCCCCAGAAGTTCACAGGTAT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGATCCAGAAGACAGTTaGTTCAAAGACTGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQDPEDS*FKDCFL
Trigger: AAGGAAACAGTCTTTGAACCAACTGTCTTCTGGATC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAATGATGAGGGGGAGATaGCTGTGGGATGAAGCTGTT +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIMMRGR*LWDEAV
Trigger: AACAGCTTCATCCCACAGCCATCTCCCCCTCATCAT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAAGCAGGGCCTTAGCATaGAGCCATCAGAAAGAAACC +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQISRALA*SHQKET
Trigger: GGTTTCTTTCTGATGGCTCCATGCTAAGGCCCTGCT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGTATGCCTGACAAGATaGCTCAAGCCATGCTACCCA +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIVCLTR*LKPCYP
Trigger: TGGGTAGCATGGCTTGAGCCATCTTGTCAGGCATAC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATTACAAGTGATAACATaGCCACATCAAGGAACAAGA +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQLQVIT*PHQGTR
Trigger: TCTTGTTCCTTGATGTGGTCATGTTATCACTTGTAA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACAGGGCCCAGCACAATaGCTGTCACATAAACATTTG +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIQGPAQ*LSHKHL
Trigger: CAAATGTTTATGTGACAGGCATTGTGCTGGGCCCTG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCTCTTGGGAACAAGCTaGAATATAAATACTTTAGAG +
Preference number: 2 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGLLGTS*NINTLE
Trigger: CTCTAAAGTATTTATATTCCAGCTTGTTCCCAAGAG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAACCCATTGAATTGTCTTaGCACTCTGGTTTAAAATCA +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQPIELS*HSGLKS
Trigger: TGATTTTAAACCAGAGTGCCAAGACAATTCAATGGG...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAATGGGTGGGGCGTTGTaGAGAATTGTCATTCATGCA +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIMGGAL*RIVIHA
Trigger: TGCATGAATGACAATTCTCCACAACGCCCCACCCAT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 90 bp TCCAGAAGACAGTTGGTTCAAAGACTGTTTCCTTTTCCCATTGAATaGTCTTGGCACTCTGGTTTAAAATCAACTGACCATAAACGTGAA +
Preference number: 2 (lower is better)
Translates to: SRRQLVQRLFPFPIE*SWHSGLKSTDHKRE
Trigger: TTCACGTTTATGGTCAGTTGATTTTAAACCAGAGTGCCAAGACAATTCAATGGGAAAAGGAAACAGTCTTTGAACCAACTGTCTTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 90 bp CTCCCCTCACCTGGGTGTTTCATAAATCACTTTCTGACTTTCAGATaGAAAGCATTTATTAAAGAACAGCCGTTTCTGATTTCACTCACA +
Preference number: 2 (lower is better)
Translates to: LPSPGCFINHFLTFR*KAFIKEQPFLISLT
Trigger: TGTGAGTGAAATCAGAAACGGCTGTTCTTTAATAAATGCTTTCAATCTGAAAGTCAGAAAGTGATTTATGAAACACCCAGGTGAGGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAAGCTATATAGCAAAATaGACTCAGACTGGCCACTCC +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQISYIAK*TQTGHS
Trigger: GGAGTGGCCAGTCTGAGTTCATTTTGCTATATAGCT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATACAATCTTGTCATCTaGAGACACCATTTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQYNLVI*RHHFPF
Trigger: AAAAGGAAAATGGTGTCTGCAGATGACAAGATTGTA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATCTAGTTGGGTGACCTaGAAAAATTTTAAACTCACT +
Preference number: 2 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQSSWVT*KNFKLT
Trigger: AGTGAGTTTAAAATTTTTCCAGGTCACCCAACTAGA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAAAGGCAGTGCTTGGCTaGATTCAGTTTGAATCCAAA +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIKAVLG*IQFESK
Trigger: TTTGGATTCAAACTGAATGCAGCCAAGCACTGCCTT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTTACCAAAAGGCAGTaGTTGGCTGCATTCAGTTTG +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIFTKRQ*LAAFSL
Trigger: CAAACTGAATGCAGCCAAGCACTGCCTTTTGGTAAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACTCTTGGGAACAAGCTaGAATATAAATACTTTAGAG +
Preference number: 2 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRALLGTS*NINTLE
Trigger: CTCTAAAGTATTTATATTCCAGCTTGTTCCCAAGAG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCAATTTTTACCACACATaGACTAGATACCTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFNFYHT*TRYLPS
Trigger: AGAGGGAAGGTATCTAGTTCATGTGTGGTAAAAATT...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCCAGCCATTACGAGCATaGTTTTTACTAAACATACTG +
Preference number: 2 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFQPLRA*FLLNIL
Trigger: CAGTATGTTTAGTAAAAATCATGCTCGTAATGGCTG...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACCTACCAGCATGTTATaGGAATTTCAATTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIPTSML*EFQFLH
Trigger: GTGGAGAAATTGAAATTCTCATAACATGCTGGTAGG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCCCTTTTCAATCTGGATaGCTCTCTAGAATTTTTGAG +
Preference number: 2 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFPFQSG*LSRIFE
Trigger: CTCAAAAATTCTAGAGAGGCATCCAGATTGAAAAGG...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTTTTCCAAAGTGGCTaGCCCATTTTACATTCCTAC +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIFFQSG*PILHSY
Trigger: GTAGGAATGTAAAATGGGGCAGCCACTTTGGAAAAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGATCCAGAAGACAGTTaGTTCAAAGACTGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIDPEDS*FKDCFL
Trigger: AAGGAAACAGTCTTTGAACCAACTGTCTTCTGGATC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAAATTTTTACCACACATaGACTAGATACCTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQINFYHT*TRYLPS
Trigger: AGAGGGAAGGTATCTAGTTCATGTGTGGTAAAAATT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGTTCATGACTATGAATaGATGAAGCTGAAGAGACAA +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIVHDYE*MKLKRQ
Trigger: TTGTCTCTTCAGCTTCATGCATTCATAGTCATGAAC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACCCATTGAATTGTCTTaGCACTCTGGTTTAAAATCA +
Preference number: 2 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIPIELS*HSGLKS
Trigger: TGATTTTAAACCAGAGTGCCAAGACAATTCAATGGG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR TCA 72 bp GCAATCTGCCCATCTCGGCCTCCCAAACTGCTGATGTaGGCCCCCACACCCGGCCTCACTGGACACTTTCTG +
Preference number: 3 (lower is better)
Translates to: AICPSRPPKLLM*APTPGLTGHFL
Trigger: CAGAAAGTGTCCAGTGAGGCCGGGTGTGGGGGCTCACATCAGCAGTTTGGGAGGCCGAGATGGGCAGATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 72 bp CAAACTGCTGATGTGAGCCCCCACACCCGGCCTCACTaGACACTTTCTGTGCCAATCCCTCTGCCGGGTGCT +
Preference number: 3 (lower is better)
Translates to: QTADVSPHTRPH*TLSVPIPLPGA
Trigger: AGCACCCGGCAGAGGGATTGGCACAGAAAGTGTCCAGTGAGGCCGGGTGTGGGGGCTCACATCAGCAGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR GCA 72 bp ACTAAGGCCAGATTCCGCAAGGTTAAGTGCAGCCACTaGTGGTACAGGCTCCATGGGTGGGGCGTTGTGGAG +
Preference number: 3 (lower is better)
Translates to: TKARFRKVKCSH*WYRLHGWGVVE
Trigger: CTCCACAACGCCCCACCCATGGAGCCTGTACCAGCAGTGGCTGCACTTAACCTTGCGGAATCTGGCCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 72 bp AAGGCCAGATTCCGCAAGGTTAAGTGCAGCCACTGCTaGTACAGGCTCCATGGGTGGGGCGTTGTGGAGAAT +
Preference number: 3 (lower is better)
Translates to: KARFRKVKCSHC*YRLHGWGVVEN
Trigger: ATTCTCCACAACGCCCCACCCATGGAGCCTGTACCAGCAGTGGCTGCACTTAACCTTGCGGAATCTGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCGCTGAGGCATGTGAATaGCGTGAACCTGGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCAEACE*REPGRQ
Trigger: CTGCCTCCCAGGTTCACGCAATTCACATGCCTCAGC...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCAGATGGGTGGATCGCTaGAGGCCAGGAGTTCATGAC +
Preference number: 3 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCRWVDR*RPGVHD
Trigger: GTCATGAACTCCTGGCCTCAAGCGATCCACCCATCT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 72 bp AGCCCAAAGCAGTTAGGCCAGAGCAGGGCCTTAGCATaGAGCCATCAGAAAGAAACCAATTACAGGATCCTA +
Preference number: 3 (lower is better)
Translates to: SPKQLGQSRALA*SHQKETNYRIL
Trigger: TAGGATCCTGTAATTGGTTTCTTTCTGATGGCTCCATGCTAAGGCCCTGCTCTGGCCTAACTGCTTTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 72 bp TTCAGAAAGCAAGCATCTTGGCAGGGCGTCTTGAAGTaGCTAAAGGCGACTAGGTATCAAGCTAATCCACCC +
Preference number: 3 (lower is better)
Translates to: FRKQASWQGVLK*LKATRYQANPP
Trigger: GGGTGGATTAGCTTGATACCTAGTCGCCTTTAGCCACTTCAAGACGCCCTGCCAAGATGCTTGCTTTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR GCA 72 bp GGGTCAGCCTACTTTGCTGATAACTCTGCCCTCCATTaGCAAACAGGCAACTTAGTGAATTTATCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: GSAYFADNSALH*QTGNLVNLSGL
Trigger: CAGGCCAGATAAATTCACTAAGTTGCCTGTTTGGCAATGGAGGGCAGAGTTATCAGCAAAGTAGGCTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGGCTGGAGGCAGATCTTaGGCAGAGTATTTCAAAGGG +
Preference number: 3 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGAGGRS*AEYFKG
Trigger: CCCTTTGAAATACTCTGCCAAAGATCTGCCTCCAGC...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR TCA 72 bp TTTTCCACGGATGATGAGGGGGAGATGGCTGTGGGATaGAGCTGTTCCACCTTATATCATCAGGCATTAGAT +
Preference number: 3 (lower is better)
Translates to: FSTDDEGEMAVG*SCSTLYHQALD
Trigger: ATCTAATGCCTGATGATATAAGGTGGAACAGCTTCATCCCACAGCCATCTCCCCCTCATCATCCGTGGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCCTTTTCCCATTGAATaGTCTTGGCACTCTGGTTTA +
Preference number: 3 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCPFPIE*SWHSGL
Trigger: TAAACCAGAGTGCCAAGACAATTCAATGGGAAAAGG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCGGGTGTCTTGTGGTTTaGATTTGCATTTTCCTGATG +
Preference number: 3 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCGCLVV*ICIFLM
Trigger: CATCAGGAAAATGCAAATCAAAACCACAAGACACCC...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAAAAGCCTAAGAACCTaGCTCAAAGTGGGTGCTCCA +
Preference number: 3 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGKSLRT*LKVGAP
Trigger: TGGAGCACCCACTTTGAGCAAGGTTCTTAGGCTTTT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGCCTCCAGCTGGCTGTaGTACATAGAAAAGCCTAAG +
Preference number: 3 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQASSWL*YIEKPK
Trigger: CTTAGGCTTTTCTATGTACAACAGCCAGCTGGAGGC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 72 bp GCCTATATTAGGTATATCAGCAGTCCCCAACCTTTCTaGCACCGAGGACCACTTTCGTGGAAAACAGTTTTT +
Preference number: 3 (lower is better)
Translates to: AYIRYISSPQPF*HRGPLSWKTVF
Trigger: AAAAACTGTTTTCCACGAAAGTGGTCCTCGGTGCCAGAAAGGTTGGGGACTGCTGATATACCTAATATAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCAATGATCATTGCACATaGGTCTTGTATTCTACGACC +
Preference number: 3 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCNDHCT*VLYSTT
Trigger: GGTCGTAGAATACAAGACCAATGTGCAATGATCATT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGACCAAAAGGCAGTGCTaGGCTGCATTCAGTTTGAAT +
Preference number: 3 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGTKRQC*AAFSLN
Trigger: ATTCAAACTGAATGCAGCCAAGCACTGCCTTTTGGT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR TCA 72 bp TCTGTTAGCAGAAAAGAATCTGAAGCTAGGTATGCCTaGCAAGATGGCTCAAGCCATGCTACCCAAAAGGAA +
Preference number: 3 (lower is better)
Translates to: SVSRKESEARYA*QDGSSHATQKE
Trigger: TTCCTTTTGGGTAGCATGGCTTGAGCCATCTTGTCAGGCATACCTAGCTTCAGATTCTTTTCTGCTAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR TCA 72 bp GGTCTCTCTCCACAGAGAAATTTAGAACTAAGACCCTaGCTGAAATCACCATCAGTCAATCAGCACCCATTC +
Preference number: 3 (lower is better)
Translates to: GLSPQRNLELRP*LKSPSVNQHPF
Trigger: GAATGGGTGCTGATTGACTGATGGTGATTTCAGTCAGGGTCTTAGTTCTAAATTTCTCTGTGGAGAGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 72 bp CCATCAGAAAGAAACCAATTACAGGATCCTAGCAGCTaGAGGCAGATCTTTGGCAGAGTATTTCAAAGGGAA +
Preference number: 3 (lower is better)
Translates to: PSERNQLQDPSS*RQIFGRVFQRE
Trigger: TTCCCTTTGAAATACTCTGCCAAAGATCTGCCTCCAGCTGCTAGGATCCTGTAATTGGTTTCTTTCTGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTTTGTGTATTCTCTTTaGTTGCCTATGCTTTGGGTA +
Preference number: 3 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCFVYSL*LPMLWV
Trigger: TACCCAAAGCATAGGCAACAAAAGAGAATACACAAA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTTGCAGAAAAGCCTGTaGAGCTATTTTGCCCATTTC +
Preference number: 3 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGLQKSL*SYFAHF
Trigger: GAAATGGGCAAAATAGCTCAACAGGCTTTTCTGCAA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGGTATGGGTAATTTCTTaGGGGACACGTATAGAGCAA +
Preference number: 3 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGVWVIS*GTRIEQ
Trigger: TTGCTCTATACGTGTCCCCAAAGAAATTACCCATAC...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTTGATGCATACAATCTaGTCATCTGCAGACACCATT +
Preference number: 3 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGLMHTI*SSADTI
Trigger: AATGGTGTCTGCAGATGACAAGATTGTATGCATCAA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATGTTTCCTTTTCCCATaGAATTGTCTTGGCACTCTG +
Preference number: 3 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQCFLFP*NCLGTL
Trigger: CAGAGTGCCAAGACAATTCAATGGGAAAAGGAAACA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAAGATCCAGAAGACAGTaGGTTCAAAGACTGTTTCCT +
Preference number: 3 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQRSRRQ*VQRLFP
Trigger: AGGAAACAGTCTTTGAACCAACTGTCTTCTGGATCT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATTGCAGAAAAGCCTGTaGAGCTATTTTGCCCATTTC +
Preference number: 3 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQLQKSL*SYFAHF
Trigger: GAAATGGGCAAAATAGCTCAACAGGCTTTTCTGCAA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR TCA 72 bp AATTACATCAGAGCAGTTACTGCAACCAGTATTGCTTaGAAACTAAAAGGCAAAGGGACTTGTAGTCTCCCC +
Preference number: 3 (lower is better)
Translates to: NYIRAVTATSIA*KLKGKGTCSLP
Trigger: GGGGAGACTACAAGTCCCTTTGCCTTTTAGTTTTCAAGCAATACTGGTTGCAGTAACTGCTCTGATGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR GCA 72 bp CCATTTGAAGAACTACCAGACTTTTTCCAAAGTGGCTaGCCCATTTTACATTCCTACCAGCATGTTATGAGA +
Preference number: 3 (lower is better)
Translates to: PFEELPDFFQSG*PILHSYQHVMR
Trigger: TCTCATAACATGCTGGTAGGAATGTAAAATGGGGCAGCCACTTTGGAAAAAGTCTGGTAGTTCTTCAAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATTGATGCATACAATCTaGTCATCTGCAGACACCATT +
Preference number: 3 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQLMHTI*SSADTI
Trigger: AATGGTGTCTGCAGATGACAAGATTGTATGCATCAA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTTGATGAAGTCCAGTTaGTGTATTCTCTTTTGTTGC +
Preference number: 3 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGLMKSS*CILFCC
Trigger: GCAACAAAAGAGAATACACAAACTGGACTTCATCAA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAATTCTGGAACTGGGATaGTTTCCACTTTTAGGCTAT +
Preference number: 3 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQILELG*FPLLGY
Trigger: ATAGCCTAAAAGTGGAAACAATCCCAGTTCCAGAAT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGTGTATTCTCTTTTGTaGCCTATGCTTTGGGTATAT +
Preference number: 3 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQVYSLL*PMLWVY
Trigger: ATATACCCAAAGCATAGGCAACAAAAGAGAATACAC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR TCA 72 bp TTGCTGGATCATATCGTAACTCTACATTTAACCATTTaGAGAACTACCAGACTTTTTCCAAAGTGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: LLDHIVTLHLTI*RTTRLFPKWLP
Trigger: GGGCAGCCACTTTGGAAAAAGTCTGGTAGTTCTTCAAATGGTTAAATGTAGAGTTACGATATGATCCAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR TCA 72 bp TCTGGAACTGGGATTGTTTCCACTTTTAGGCTATTATaGATAACGCTGCTATGGACATTTGTGCACAGGTTT +
Preference number: 3 (lower is better)
Translates to: SGTGIVSTFRLL*ITLLWTFVHRF
Trigger: AAACCTGTGCACAAATGTCCATAGCAGCGTTATTCATAATAGCCTAAAAGTGGAAACAATCCCAGTTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATACCTGGGAGAGGAATaGCTGGATCATATCGTAACT +
Preference number: 3 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIYLGEE*LDHIVT
Trigger: AGTTACGATATGATCCAGCAATTCCTCTCCCAGGTA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR TCA 72 bp ATTTCAAAGGGAAGCAAGGCATCCTCAACAAGACAATaGAGTGATGAGCAAATACGTAAGCAGCAACTTAAA +
Preference number: 3 (lower is better)
Translates to: ISKGSKASSTRQ*SDEQIRKQQLK
Trigger: TTTAAGTTGCTGCTTACGTATTTGCTCATCACTTCATTGTCTTGTTGAGGATGCCTTGCTTCCCTTTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR GCA 72 bp ACCTGTGAACTTCTGGGGATACATAAGGAGTTACTTTaGTCAGTTTATTCAGCCATTACGAGCATGATTTTT +
Preference number: 3 (lower is better)
Translates to: TCELLGIHKELL*SVYSAITSMIF
Trigger: AAAAATCATGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAAGTTCACAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 72 bp CCAAATCTTTTTCCACCCGATATACCTGTGAACTTCTaGGGATACATAAGGAGTTACTTTGCTCAGTTTATT +
Preference number: 3 (lower is better)
Translates to: PNLFPPDIPVNF*GYIRSYFAQFI
Trigger: AATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAAGTTCACAGGTATATCGGGTGGAAAAAGATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATGTTTCCTTTTCCCATaGAATTGTCTTGGCACTCTG +
Preference number: 3 (lower is better)
Translates to: NTLMNVWVISLGTRIEQICFLFP*NCLGTL
Trigger: CAGAGTGCCAAGACAATTCAATGGGAAAAGGAAACA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CCA 72 bp GTTCAAAGACTGTTTCCTTTTCCCATTGAATTGTCTTaGCACTCTGGTTTAAAATCAACTGACCATAAACGT +
Preference number: 3 (lower is better)
Translates to: VQRLFPFPIELS*HSGLKSTDHKR
Trigger: ACGTTTATGGTCAGTTGATTTTAAACCAGAGTGCCAAGACAATTCAATGGGAAAAGGAAACAGTCTTTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAAATGATCATTGCACATaGGTCTTGTATTCTACGACC +
Preference number: 3 (lower is better)
Translates to: NTLMNVWVISLGTRIEQINDHCT*VLYSTT
Trigger: GGTCGTAGAATACAAGACCAATGTGCAATGATCATT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATGTACAGAAATACAATaGAGGCTGAGTATGGTGATT +
Preference number: 3 (lower is better)
Translates to: NTLMNVWVISLGTRIEQICTEIQ*RLSMVI
Trigger: AATCACCATACTCAGCCTCAATTGTATTTCTGTACA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTGATGAAGTCCAGTTaGTGTATTCTCTTTTGTTGC +
Preference number: 3 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILMKSS*CILFCC
Trigger: GCAACAAAAGAGAATACACAAACTGGACTTCATCAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCTGCGGAGCCGCCCGTaGCTACCAGCTTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCLRSRP*LPASPT
Trigger: GGTGGGGGAAGCTGGTAGGCACGGGCGGCTCCGCAG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317402.11
CDS-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCCCGAGTCCGGTCACTaGGGAGCCGCCCGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCPESGH*GAARAY
Trigger: GTAGGCACGGGCGGCTCCGCAGTGACCGGACTCGGG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317402.11
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGGGCCTCCCAAACTGCTaGTGTGAGCCCCCACACCCG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGGLPNC*CEPPHP
Trigger: CGGGTGTGGGGGCTCACATCAGCAGTTTGGGAGGCC...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 72 bp GCAGCCACTGCTGGTACAGGCTCCATGGGTGGGGCGTaGTGGAGAATTGTCATTCATGCATCTAGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: AATAGTGSMGGA*WRIVIHASSSY
Trigger: GTAACTACTAGATGCATGAATGACAATTCTCCACAACGCCCCACCCATGGAGCCTGTACCAGCAGTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCTGGTACAGGCTCCATaGGTGGGGCGTTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCLVQAP*VGRCGE
Trigger: TTCTCCACAACGCCCCACCCATGGAGCCTGTACCAG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCAAGTGCAGCCACTGCTaGTACAGGCTCCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCKCSHC*YRLHGW
Trigger: CCACCCATGGAGCCTGTACCAGCAGTGGCTGCACTT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCACTGGACACTTTCTGTaGCAATCCCTCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCTGHFL*QSLCRV
Trigger: CACCCGGCAGAGGGATTGGCACAGAAAGTGTCCAGT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTTGCCCAGGCTAGAGTaGAATGGCACGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCLPRLE*NGTVSA
Trigger: AGCTGAGACCGTGCCATTGCACTCTAGCCTGGGCAA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCAGGCTAGAGTGCAATaGCACGGTCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCQARVQ*HGLSSL
Trigger: CAGTGAGCTGAGACCGTGCCATTGCACTCTAGCCTG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCAATAAGTTCCTGAGGTaGGGCTTCATGACGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCNKFLR*GFMTLP
Trigger: GGGCAGCGTCATGAAGCCCCACCTCAGGAACTTATT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCTTCCTCCTTGGCTCTaGAAGAAGCCCCTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCLPPWL*KKPLRH
Trigger: ATGACGAAGGGGCTTCTTCCAGAGCCAAGGAGGAAG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381254.7
CDS-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTATCTCCATCATTGGTaGGGCAGCCATCGACATGAC +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCYLHHW*GSHRHD
Trigger: GTCATGTCGATGGCTGCCTCACCAATGATGGAGATA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTGGTCTAGATGGTCCTaGACTATCACAGCCACGACT +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCWSRWS*TITATT
Trigger: AGTCGTGGCTGTGATAGTTCAGGACCATCTAGACCA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCGAAGCTAGGTATGCCTaGCAAGATGGCTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCEARYA*QDGSSH
Trigger: ATGGCTTGAGCCATCTTGTCAGGCATACCTAGCTTC...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCGGCCTCCCAAACTGCTaGTGTGAGCCCCCACACCCG +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFGLPNC*CEPPHP
Trigger: CGGGTGTGGGGGCTCACATCAGCAGTTTGGGAGGCC...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTTGGTCTCGAACTCCTaGCCTCAGGCAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGLVSNS*PQAICP
Trigger: TGGGCAGATTGCCTGAGGTCAGGAGTTCGAGACCAA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCTCCCACCCTCACACTaGCCCCTACTAGTGTTACTG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGLPPSH*PLLVLL
Trigger: CAGTAACACTAGTAGGGGGCAGTGTGAGGGTGGGAG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTCCAGGGACTCCCTTTaGGAGATAATCACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCSRDSL*EIITAK
Trigger: CTTGGCTGTGATTATCTCCCAAAGGGAGTCCCTGGA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 72 bp ACCAATTACAGGATCCTAGCAGCTGGAGGCAGATCTTaGGCAGAGTATTTCAAAGGGAAGCAAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: TNYRILAAGGRS*AEYFKGKQGIL
Trigger: GAGGATGCCTTGCTTCCCTTTGAAATACTCTGCCAAAGATCTGCCTCCAGCTGCTAGGATCCTGTAATTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 72 bp CTGGTACAGGCTCCATGGGTGGGGCGTTGTGGAGAATaGTCATTCATGCATCTAGTAGTTACTGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: LVQAPWVGRCGE*SFMHLVVTVSN
Trigger: GTTTGACACAGTAACTACTAGATGCATGAATGACAATTCTCCACAACGCCCCACCCATGGAGCCTGTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCTGAGGCATGTGAATTaGGTGAACCTGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGLRHVN*VNLGGR
Trigger: TCTGCCTCCCAGGTTCACGCAATTCACATGCCTCAG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCAGGGCCCAGCACAATaGCTGTCACATAAACATTTG +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCQGPAQ*LSHKHL
Trigger: CAAATGTTTATGTGACAGGCATTGTGCTGGGCCCTG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGTTAAGTGCAGCCACTaGTGGTACAGGCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQVKCSH*WYRLHG
Trigger: CCCATGGAGCCTGTACCAGCAGTGGCTGCACTTAAC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTCCCTGCTACTCAGGTaGCTGAGGCATGTGAATTGC +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGSLLLR*LRHVNC
Trigger: GCAATTCACATGCCTCAGCCACCTGAGTAGCAGGGA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATCACTCCCATTCTGGTaGTTATCTGCTCCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQSLPFW*LSAPPS
Trigger: ACTCGGGGGAGCAGATAATCACCAGAATGGGAGTGA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317402.11
CDS-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTGCAGTGTACCTTTCTaGTTCACAGGACAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCCSVPF*FTGQLF
Trigger: GAACAACTGTCCTGTGAATCAGAAAGGTACACTGCA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGATGGGTGGATCGCTTaGGGCCAGGAGTTCATGACT +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRADGWIA*GQEFMT
Trigger: AGTCATGAACTCCTGGCCTCAAGCGATCCACCCATC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGACTATTGCTGGGGCTaGCTCTGCAGCATGTCAGTT +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQDYCWG*LCSMSV
Trigger: AACTGACATGCTGCAGAGTCAGCCCCAGCAATAGTC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGCGGTAATTCTCGCTTaGATGCCGCTCAACACCTGC +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAAVILA*MPLNTC
Trigger: GCAGGTGTTGAGCGGCATGCAAGCGAGAATTACCGC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCTTGCTCAAAGTGGGTaGTCCAAAAATGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCLAQSG*SKNVVG
Trigger: ACCTACCACATTTTTGGAGCACCCACTTTGAGCAAG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGTTAAGTGCAGCCACTaGTGGTACAGGCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAVKCSH*WYRLHG
Trigger: CCCATGGAGCCTGTACCAGCAGTGGCTGCACTTAAC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAACTGGACACTTTCTGTaGCAATCCCTCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRATGHFL*QSLCRV
Trigger: CACCCGGCAGAGGGATTGGCACAGAAAGTGTCCAGT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCATTGCCCAGGCTAGAGTaGAATGGCACGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRALPRLE*NGTVSA
Trigger: AGCTGAGACCGTGCCATTGCACTCTAGCCTGGGCAA...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAAATAAGTTCCTGAGGTaGGGCTTCATGACGCTGCCC +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQNKFLR*GFMTLP
Trigger: GGGCAGCGTCATGAAGCCCCACCTCAGGAACTTATT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTCCAGGGACTCCCTTTaGGAGATAATCACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGSRDSL*EIITAK
Trigger: CTTGGCTGTGATTATCTCCCAAAGGGAGTCCCTGGA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCAAAGCCATCAGGGATaGCTGATAGCTCTGATTCAA +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCQSHQG*LIALIQ
Trigger: TTGAATCAGAGCTATCAGCCATCCCTGATGGCTTTG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCAGCTTTCCCAAACACTaGGGCACTTTGTTCATCAGA +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCSFPKH*GTLFIR
Trigger: TCTGATGAACAAAGTGCCCCAGTGTTTGGGAAAGCT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAGCAGGGCCTTAGCATaGAGCCATCAGAAAGAAACC +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGSRALA*SHQKET
Trigger: GGTTTCTTTCTGATGGCTCCATGCTAAGGCCCTGCT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGGTATGCCTGACAAGATaGCTCAAGCCATGCTACCCA +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGVCLTR*LKPCYP
Trigger: TGGGTAGCATGGCTTGAGCCATCTTGTCAGGCATAC...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACAGGCTAGAGTGCAATaGCACGGTCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAQARVQ*HGLSSL
Trigger: CAGTGAGCTGAGACCGTGCCATTGCACTCTAGCCTG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCAGGGCGTCTTGAAGTaGCTAAAGGCGACTAGGTAT +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGQGVLK*LKATRY
Trigger: ATACCTAGTCGCCTTTAGCCACTTCAAGACGCCCTG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAGAAAGCAAGCATCTTaGCAGGGCGTCTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGRKQAS*QGVLKW
Trigger: CCACTTCAAGACGCCCTGCCAAGATGCTTGCTTTCT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 72 bp TTCACCTTCAGAAAGCAAGCATCTTGGCAGGGCGTCTaGAAGTGGCTAAAGGCGACTAGGTATCAAGCTAAT +
Preference number: 4 (lower is better)
Translates to: FTFRKQASWQGV*KWLKATRYQAN
Trigger: ATTAGCTTGATACCTAGTCGCCTTTAGCCACTTCAAGACGCCCTGCCAAGATGCTTGCTTTCTGAAGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 72 bp AAATATTCATTCTGCCCACAGAAGGGTCAGCCTACTTaGCTGATAACTCTGCCCTCCATTGCCAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: KYSFCPQKGQPT*LITLPSIAKQA
Trigger: TGCCTGTTTGGCAATGGAGGGCAGAGTTATCAGCAAAGTAGGCTGACCCTTCTGTGGGCAGAATGAATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCACCGATTAAACCTCTaGAGTAAACTTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCHRLNL*SKLCPF
Trigger: GAAAGGGCAAAGTTTACTTCAGAGGTTTAATCGGTG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTTAGAACTAAGACCCTaGCTGAAATCACCATCAGTC +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCLELRP*LKSPSV
Trigger: GACTGATGGTGATTTCAGTCAGGGTCTTAGTTCTAA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGACTATTGCTGGGGCTaGCTCTGCAGCATGTCAGTT +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRADYCWG*LCSMSV
Trigger: AACTGACATGCTGCAGAGTCAGCCCCAGCAATAGTC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATCATGTTCTGTACGGTaGCACTCACAAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQSCSVR*HSQGQQ
Trigger: CTGCTGTCCTTGTGAGTGGCACCGTACAGAACATGA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTGCCCTCATCAAGTCTaGATTCTAGTTTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCCPHQV*ILVWET
Trigger: TGTTTCCCAAACTAGAATGCAGACTTGATGAGGGCA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCAAGCATTCGAGCATATaGAGGCACTCTCTTAAGACT +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCKHSSI*RHSLKT
Trigger: AGTCTTAAGAGAGTGCCTCCATATGCTCGAATGCTT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGATGGAACACCTTGCATaGCCTTCCAAAGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGMEHLA*PSKVEE
Trigger: CTCTTCCACTTTGGAAGGCCATGCAAGGTGTTCCAT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCGAGGACCACTTTCGTaGAAAACAGTTTTTCCACGG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGRGPLS*KTVFPR
Trigger: CCGTGGAAAAACTGTTTTCCACGAAAGTGGTCCTCG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGTATGCCTGACAAGATaGCTCAAGCCATGCTACCCA +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQVCLTR*LKPCYP
Trigger: TGGGTAGCATGGCTTGAGCCATCTTGTCAGGCATAC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAACACTGGGCCTCCAGCTaGCTGTTGTACATAGAAAAG +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQHWASS*LLYIEK
Trigger: CTTTTCTATGTACAACAGCCAGCTGGAGGCCCAGTG...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGATGGGTGGGGCGTTGTaGAGAATTGTCATTCATGCA +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGMGGAL*RIVIHA
Trigger: TGCATGAATGACAATTCTCCACAACGCCCCACCCAT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAAGAAAGCAAGCATCTTaGCAGGGCGTCTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQRKQAS*QGVLKW
Trigger: CCACTTCAAGACGCCCTGCCAAGATGCTTGCTTTCT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAAGAGTCCCACTGTTTTaGACTATTGCTGGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQRVPLF*TIAGAD
Trigger: GTCAGCCCCAGCAATAGTCCAAAACAGTGGGACTCT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAACAACCCTTCCTCCTTaGCTCTGGAAGAAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRATTLPP*LWKKPL
Trigger: AAGGGGCTTCTTCCAGAGCCAAGGAGGAAGGGTTGT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCATATCTCCATCATTGGTaGGGCAGCCATCGACATGAC +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAYLHHW*GSHRHD
Trigger: GTCATGTCGATGGCTGCCTCACCAATGATGGAGATA...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTGGCTGCATTCAGTTTaGATCCAAAATCTGATAGTG +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCWLHSV*IQNLIV
Trigger: CACTATCAGATTTTGGATTCAAACTGAATGCAGCCA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGGGCATCTGGGGGAAGTaGACAGAAATAAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGGIWGK*TEIRLD
Trigger: ATCAAGTCTTATTTCTGTTCACTTCCCCCAGATGCC...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAATGTGGCAAGTTCCTaGAAGAGGCTAATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGNVASS*KRLMQA
Trigger: AGCTTGCATTAGCCTCTTTCAGGAACTTGCCACATT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAAGAACAGCCGTTTCTaGTTTCACTCACAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGKNSRF*FHSQKG
Trigger: GCCTTTCTGTGAGTGAAATCAGAAACGGCTGTTCTT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACATCCTGGAGTGAAGTaGAGTGGCACTATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAHPGVK*SGTISA
Trigger: AGCTGAGATAGTGCCACTGCACTTCACTCCAGGATG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCATCAGAGCAGTTACTaGAACCAGTATTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCHQSSY*NQYCLK
Trigger: TTTCAAGCAATACTGGTTGCAGTAACTGCTCTGATG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTCAGATCAACTGCAATaGTTTTCCCACCAAGATTAC +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCSDQLQ*FSHQDY
Trigger: GTAATCTTGGTGGGAAAACCATTGCAGTTGATCTGA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGATCAGCTTTCAGCTTTaGTGGTTCCCCTTCCATAAC +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGISFQL*WFPFHN
Trigger: GTTATGGAAGGGGAACCACCAAAGCTGAAAGCTGAT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCAACAAATCAGGTCTTTaGTACCTGATAACCTTCACC +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCNKSGL*YLITFT
Trigger: GGTGAAGGTTATCAGGTACCAAAGACCTGATTTGTT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCAAAGCCATCAGGGATaGCTGATAGCTCTGATTCAA +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGQSHQG*LIALIQ
Trigger: TTGAATCAGAGCTATCAGCCATCCCTGATGGCTTTG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAGCTTTCCCAAACACTaGGGCACTTTGTTCATCAGA +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGSFPKH*GTLFIR
Trigger: TCTGATGAACAAAGTGCCCCAGTGTTTGGGAAAGCT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCTTAGTTTTAATCTCTaGCGTAAAGGAAGAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCLSFNL*RKGRGL
Trigger: TAGCCCTCTTCCTTTACGCCAGAGATTAAAACTAAG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATCCCCTTCCTCATTCTaGAACTGGGATTGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQSPSSF*NWDCFH
Trigger: GTGGAAACAATCCCAGTTCCAGAATGAGGAAGGGGA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCTGGAGGCAGATCTTTaGCAGAGTATTTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGLEADL*QSISKG
Trigger: TCCCTTTGAAATACTCTGCCAAAGATCTGCCTCCAG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCACGGCCACCATGTGTaGCCAGATAGAGATTTTATA +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGHGHHV*PDRDFI
Trigger: TATAAAATCTCTATCTGGCCACACATGGTGGCCGTG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACACTGGGCCTCCAGCTaGCTGTTGTACATAGAAAAG +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAHWASS*LLYIEK
Trigger: CTTTTCTATGTACAACAGCCAGCTGGAGGCCCAGTG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAATGGGTGGGGCGTTGTaGAGAATTGTCATTCATGCA +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQMGGAL*RIVIHA
Trigger: TGCATGAATGACAATTCTCCACAACGCCCCACCCAT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACAGGGCGTCTTGAAGTaGCTAAAGGCGACTAGGTAT +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAQGVLK*LKATRY
Trigger: ATACCTAGTCGCCTTTAGCCACTTCAAGACGCCCTG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGACCCATACCGAGACTaGTTCCTCTTGCTTATGACA +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRADPYRD*FLLLMT
Trigger: TGTCATAAGCAAGAGGAATCAGTCTCGGTATGGGTC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCACCGATTAAACCTCTaGAGTAAACTTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGHRLNL*SKLCPF
Trigger: GAAAGGGCAAAGTTTACTTCAGAGGTTTAATCGGTG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAACATCCATTACGTTCATaGTCCTTAGGTGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQHPLRS*SLGEPG
Trigger: TCCAGGTTCACCTAAGGATCATGAACGTAATGGATG...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTGTTCTCTACTTCACTaGGTTGCCTATCATGTTCTG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGCSLLH*VAYHVL
Trigger: CAGAACATGATAGGCAACTCAGTGAAGTAGAGAACA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCGAATTGGCTGTAGTTaGTTAGAGTTTCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGRIGCS*LEFLLP
Trigger: TGGTAGCAGAAACTCTAATCAACTACAGCCAATTCG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCAATTTTTACCACACATaGACTAGATACCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCNFYHT*TRYLPS
Trigger: AGAGGGAAGGTATCTAGTTCATGTGTGGTAAAAATT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACTTATAGGATGCCATTaGTCACTGTATCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRALIGCH*SLYLQG
Trigger: GCCCTGGAGATACAGTGATCAATGGCATCCTATAAG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGGATCTTAGTCTTATCTaGGGGAGAGATAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGDLSLI*GRDRGI
Trigger: AATGCCTCTATCTCTCCCTCAGATAAGACTAAGATC...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTGGTCTCGAACTCCTaGCCTCAGGCAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILVSNS*PQAICP
Trigger: TGGGCAGATTGCCTGAGGTCAGGAGTTCGAGACCAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGAGACTCAGATCAACTaGAATGGTTTTCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQETQIN*NGFPTK
Trigger: CTTGGTGGGAAAACCATTGCAGTTGATCTGAGTCTC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTCTACTTCACTGAGTTaGCTATCATGTTCTGTACGG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGSTSLS*LSCSVR
Trigger: CCGTACAGAACATGATAGGCAACTCAGTGAAGTAGA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTTTACCAAAAGGCAGTaGTTGGCTGCATTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGFTKRQ*LAAFSL
Trigger: CAAACTGAATGCAGCCAAGCACTGCCTTTTGGTAAA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACTCCCACCCTCACACTaGCCCCTACTAGTGTTACTG +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILPPSH*PLLVLL
Trigger: CAGTAACACTAGTAGGGGGCAGTGTGAGGGTGGGAG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAAAAGGACTTAGTCCCTaGCCTCATCAAGTCTGCATT +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQKGLSP*PHQVCI
Trigger: AATGCAGACTTGATGAGGGCAGGGACTAAGTCCTTT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCTTCCGCAAGGTTAAGTaGAGCCACTGCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFFRKVK*SHCWYR
Trigger: CCTGTACCAGCAGTGGCTGCACTTAACCTTGCGGAA...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCGTTCATGACTATGAATaGATGAAGCTGAAGAGACAA +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCVHDYE*MKLKRQ
Trigger: TTGTCTCTTCAGCTTCATGCATTCATAGTCATGAAC...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAACTGTTTTACCCTAAGTaGTACCAGCAGAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQLFYPK*YQQNRN
Trigger: GTTCCTGTTCTGCTGGTAGCACTTAGGGTAAAACAG...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAAACTCTGCCCTCCATTaGCAAACAGGCAACTTAGTG +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRANSALH*QTGNLV
Trigger: CACTAAGTTGCCTGTTTGGCAATGGAGGGCAGAGTT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCGTAACAGTCAACATGTaGGTCCTTTGTATTCATAGT +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCVTVNM*VLCIHS
Trigger: ACTATGAATACAAAGGACCCACATGTTGACTGTTAC...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAACATGGCCTTCCAAAGTaGAAGAGCACACTAAAGGTA +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQHGLPK*KSTLKV
Trigger: TACCTTTAGTGTGCTCTTCCACTTTGGAAGGCCATG...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATCTTGGGTATATACCTaGGAGAGGAATTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQSWVYT*ERNCWI
Trigger: GATCCAGCAATTCCTCTCCCAGGTATATACCCAAGA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCCAGGATCCTAGCAGCTaGAGGCAGATCTTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFQDPSS*RQIFGR
Trigger: TCTGCCAAAGATCTGCCTCCAGCTGCTAGGATCCTG...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCCTTTTTCGCCCATCCTaGAGTGAAGTGCAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFLFRPS*SEVQWH
Trigger: GTGCCACTGCACTTCACTCCAGGATGGGCGAAAAAG...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCTACAGGCTCCATGGGTaGGGCGTTGTGGAGAATTGT +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFYRLHG*GVVENC
Trigger: ACAATTCTCCACAACGCCCCACCCATGGAGCCTGTA...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGATCTCCCTGTTTTCTaGGACCACGATTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRADLPVF*DHDFPE
Trigger: TTCTGGAAAATCGTGGTCTCAGAAAACAGGGAGATC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATGTTCTCTACTTCACTaGGTTGCCTATCATGTTCTG +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQCSLLH*VAYHVL
Trigger: CAGAACATGATAGGCAACTCAGTGAAGTAGAGAACA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAAGCAAGCTATTCAATaGGGCAGAAATAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGKQAIQ*GRNRFL
Trigger: CAGGAATCTATTTCTGCCTCATTGAATAGCTTGCTT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCATGCAGTGTACCTTTCTaGTTCACAGGACAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRACSVPF*FTGQLF
Trigger: GAACAACTGTCCTGTGAATCAGAAAGGTACACTGCA...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCTGTGCTTCATTCTTTaGGTTGTGTACTTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGLCFIL*VVYLAF
Trigger: GAAAGCTAAGTACACAACTCAAAGAATGAAGCACAG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAAGCTATATAGCAAAATaGACTCAGACTGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRASYIAK*TQTGHS
Trigger: GGAGTGGCCAGTCTGAGTTCATTTTGCTATATAGCT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCGAAGCTAGGTATGCCTaGCAAGATGGCTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFEARYA*QDGSSH
Trigger: ATGGCTTGAGCCATCTTGTCAGGCATACCTAGCTTC...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATGTCAATGGTGGCAGTaGCTTCACAGATATCAAAAC +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQCQWWQ*LHRYQN
Trigger: GTTTTGATATCTGTGAAGTCACTGCCACCATTGACA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGACAGCTACAATTTACTaGGTCCCTAGAATGTGTCAA +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGTATIY*VPRMCQ
Trigger: TTGACACATTCTAGGGACTCAGTAAATTGTAGCTGT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAAATGTGGCAAGTTCCTaGAAGAGGCTAATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRANVASS*KRLMQA
Trigger: AGCTTGCATTAGCCTCTTTCAGGAACTTGCCACATT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAAAGAACAGCCGTTTCTaGTTTCACTCACAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAKNSRF*FHSQKG
Trigger: GCCTTTCTGTGAGTGAAATCAGAAACGGCTGTTCTT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATCACTCCCATTCTGGTaGTTATCTGCCGGACAACCC +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQISLPFW*LSAGQP
Trigger: GGGTTGTCCGGCAGATAATCACCAGAATGGGAGTGA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381254.7
CDS-3UTR GCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGAGACTCAGATCAACTaGAATGGTTTTCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAETQIN*NGFPTK
Trigger: CTTGGTGGGAAAACCATTGCAGTTGATCTGAGTCTC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCTCATGTTCTGTACGGTaGCACTCACAAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFSCSVR*HSQGQQ
Trigger: CTGCTGTCCTTGTGAGTGGCACCGTACAGAACATGA...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACAGCAATTTCTCACATaGATAGTGATTGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAQQFLT*IVIGPL
Trigger: GAGTGGCCCAATCACTATGCATGTGAGAAATTGCTG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCCATGAACTGTTCTTGTaGATTCAAACATGGAGTATT +
Preference number: 4 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCHELFL*IQTWSI
Trigger: AATACTCCATGTTTGAATGCACAAGAACAGTTCATG...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAATGCCAGAAAGTAGATaGTCTTCAGGACTAATCCCA +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQMPESR*SSGLIP
Trigger: TGGGATTAGTCCTGAAGAGCATCTACTTTCTGGCAT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAAAAGGACTTAGTCCCTaGCCTCATCAAGTCTGCATT +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAKGLSP*PHQVCI
Trigger: AATGCAGACTTGATGAGGGCAGGGACTAAGTCCTTT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTCAGATCAACTGCAATaGTTTTCCCACCAAGATTAC +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGSDQLQ*FSHQDY
Trigger: GTAATCTTGGTGGGAAAACCATTGCAGTTGATCTGA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAAATAACCTCATGGAATaGGAATCCCTCACAACAGCA +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQNNLME*ESLTTA
Trigger: TGCTGTTGTGAGGGATTCCCATTCCATGAGGTTATT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCAGAGTCCCACTGTTTTaGACTATTGCTGGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFRVPLF*TIAGAD
Trigger: GTCAGCCCCAGCAATAGTCCAAAACAGTGGGACTCT...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGATTCCTCTTGCTTATaGCATCAGCTTTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRADSSCL*HQLSAL
Trigger: CAAAGCTGAAAGCTGATGTCATAAGCAAGAGGAATC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCCATGACCACCAGCATTaGGATAAGCACACATGGCTT +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFHDHQH*DKHTWL
Trigger: AAGCCATGTGTGCTTATCTCAATGCTGGTGGTCATG...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCAGCCATTACGAGCATaGTTTTTACTAAACATACTG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGQPLRA*FLLNIL
Trigger: CAGTATGTTTAGTAAAAATCATGCTCGTAATGGCTG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCATATCACAGCCACGACTaGACAAATCAGAATAAGCAG +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAYHSHD*TNQNKQ
Trigger: CTGCTTATTCTGATTTGTTCAGTCGTGGCTGTGATA...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCCTTATAGGATGCCATTaGTCACTGTATCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFLIGCH*SLYLQG
Trigger: GCCCTGGAGATACAGTGATCAATGGCATCCTATAAG...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACCTTGTGAGCCATGCTaGAGTACTAAGGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIPCEPC*STKARF
Trigger: GAATCTGGCCTTAGTACTTCAGCATGGCTCACAAGG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGGGATTATAAAGTTATaGCATGTGAGCTGGTCCTTA +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQGIIKL*HVSWSL
Trigger: TAAGGACCAGCTCACATGTCATAACTTTATAATCCC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAATGCCAGAAAGTAGATaGTCTTCAGGACTAATCCCA +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAMPESR*SSGLIP
Trigger: TGGGATTAGTCCTGAAGAGCATCTACTTTCTGGCAT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCCTTTTCAATCTGGATaGCTCTCTAGAATTTTTGAG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGPFQSG*LSRIFE
Trigger: CTCAAAAATTCTAGAGAGGCATCCAGATTGAAAAGG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAAGATGGCTCAAGCCATaGTACCCAAAAGGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRARWLKP*YPKGKS
Trigger: ACTTTTTCCTTTTGGGTAGCATGGCTTGAGCCATCT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCAACTCTGCCCTCCATTaGCAAACAGGCAACTTAGTG +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFNSALH*QTGNLV
Trigger: CACTAAGTTGCCTGTTTGGCAATGGAGGGCAGAGTT...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCTACTCAACTTGTTATaGCCACTTTCTTTGAAATGG +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGLLNLL*PLSLKW
Trigger: CCATTTCAAAGAAAGTGGCCATAACAAGTTGAGTAG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGACTCTGATGAATGTATaGGTAATTTCTTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGTLMNV*VISLGT
Trigger: TGTCCCCAAAGAAATTACCCATACATTCATCAGAGT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGACCCATACCGAGACTaGTTCCTCTTGCTTATGACA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIDPYRD*FLLLMT
Trigger: TGTCATAAGCAAGAGGAATCAGTCTCGGTATGGGTC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCGATCTCCCTGTTTTCTaGGACCACGATTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFDLPVF*DHDFPE
Trigger: TTCTGGAAAATCGTGGTCTCAGAAAACAGGGAGATC...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACATGACCACCAGCATTaGGATAAGCACACATGGCTT +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIHDHQH*DKHTWL
Trigger: AAGCCATGTGTGCTTATCTCAATGCTGGTGGTCATG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGATGAGGTATTGGGTTaGCTAGATTCTGAAATTAGA +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQDEVLG*LDSEIR
Trigger: TCTAATTTCAGAATCTAGTCAACCCAATACCTCATC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAACAGCCATTACGAGCATaGTTTTTACTAAACATACTG +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQQPLRA*FLLNIL
Trigger: CAGTATGTTTAGTAAAAATCATGCTCGTAATGGCTG...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACCTACCAGCATGTTATaGGAATTTCAATTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAPTSML*EFQFLH
Trigger: GTGGAGAAATTGAAATTCTCATAACATGCTGGTAGG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCAGCTATATAGCAAAATaGACTCAGACTGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFSYIAK*TQTGHS
Trigger: GGAGTGGCCAGTCTGAGTTCATTTTGCTATATAGCT...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCAGTGCTCTTTCCAAATaGTGGTATCGGACACAGCTA +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFSALSK*WYRTQL
Trigger: TAGCTGTGTCCGATACCATCATTTGGAAAGAGCACT...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTACAATCTTGTCATCTaGAGACACCATTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGYNLVI*RHHFPF
Trigger: AAAAGGAAAATGGTGTCTGCAGATGACAAGATTGTA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATGCTATGGACATTTGTaGACAGGTTTTTATGTGGAT +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQCYGHL*TGFYVD
Trigger: ATCCACATAAAAACCTGTGCACAAATGTCCATAGCA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCCTGTTTTACCCTAAGTaGTACCAGCAGAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFLFYPK*YQQNRN
Trigger: GTTCCTGTTCTGCTGGTAGCACTTAGGGTAAAACAG...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCATCAGCTTTCAGCTTTaGTGGTTCCCCTTCCATAAC +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFISFQL*WFPFHN
Trigger: GTTATGGAAGGGGAACCACCAAAGCTGAAAGCTGAT...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGATCCAGAAGACAGTTaGTTCAAAGACTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRADPEDS*FKDCFL
Trigger: AAGGAAACAGTCTTTGAACCAACTGTCTTCTGGATC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACGAGGACCACTTTCGTaGAAAACAGTTTTTCCACGG +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIRGPLS*KTVFPR
Trigger: CCGTGGAAAAACTGTTTTCCACGAAAGTGGTCCTCG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTCTAGTTGGGTGACCTaGAAAAATTTTAAACTCACT +
Preference number: 4 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGSSWVT*KNFKLT
Trigger: AGTGAGTTTAAAATTTTTCCAGGTCACCCAACTAGA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCACAAATGGTCTTAGGTaGCTAGAGCCAAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFTNGLR*LEPRFM
Trigger: CATGAACCTTGGCTCTAGCCACCTAAGACCATTTGT...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCGATTCCTCTTGCTTATaGCATCAGCTTTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFDSSCL*HQLSAL
Trigger: CAAAGCTGAAAGCTGATGTCATAAGCAAGAGGAATC...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACATCCATTACGTTCATaGTCCTTAGGTGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIHPLRS*SLGEPG
Trigger: TCCAGGTTCACCTAAGGATCATGAACGTAATGGATG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCATTGGAATTCTGCTTATaGAAGATTTCACATGTGGGT +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRALEFCL*KISHVG
Trigger: ACCCACATGTGAAATCTTTCATAAGCAGAATTCCAA...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCTGCAGAAAAGCCTGTTaGGCTATTTTGCCCATTTCA +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFCRKAC*AILPIS
Trigger: TGAAATGGGCAAAATAGCTCAACAGGCTTTTCTGCA...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACAGTCCTTAAAGAGTTaGGATGATACAAGGTTTGTA +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAQSLKS*DDTRFV
Trigger: TACAAACCTTGTATCATCTCAACTCTTTAAGGACTG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCTATCACAGCCACGACTaGACAAATCAGAATAAGCAG +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFYHSHD*TNQNKQ
Trigger: CTGCTTATTCTGATTTGTTCAGTCGTGGCTGTGATA...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCATTACAAGTGATAACATaGCCACATCAAGGAACAAGA +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRALQVIT*PHQGTR
Trigger: TCTTGTTCCTTGATGTGGTCATGTTATCACTTGTAA...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGGCATCTGGGGGAAGTaGACAGAAATAAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIGIWGK*TEIRLD
Trigger: ATCAAGTCTTATTTCTGTTCACTTCCCCCAGATGCC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTTACCAGTTTGGCCTaGATCCTAACTACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIFTSLA*ILTTVP
Trigger: AGGCACAGTAGTTAGGATTCAGGCCAAACTGGTAAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381254.7
CDS-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAACAGGCTCCAAAATTTaGCACAAGTCATTCACTCCC +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQITGSKI*HKSFTP
Trigger: GGGAGTGAATGACTTGTGGCAAATTTTGGAGCCTGT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACCTTTTCAATCTGGATaGCTCTCTAGAATTTTTGAG +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAPFQSG*LSRIFE
Trigger: CTCAAAAATTCTAGAGAGGCATCCAGATTGAAAAGG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCAGATGGCTCAAGCCATaGTACCCAAAAGGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFRWLKP*YPKGKS
Trigger: ACTTTTTCCTTTTGGGTAGCATGGCTTGAGCCATCT...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCAAGGCAGTGCTTGGCTaGATTCAGTTTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFKAVLG*IQFESK
Trigger: TTTGGATTCAAACTGAATGCAGCCAAGCACTGCCTT...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACTTGCTCAAAGTGGGTaGTCCAAAAATGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILAQSG*SKNVVG
Trigger: ACCTACCACATTTTTGGAGCACCCACTTTGAGCAAG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGCTCATTACTTCATCTaGTTCTGGCAAATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAAHYFI*FWQIVF
Trigger: GAAAACAATTTGCCAGAACCAGATGAAGTAATGAGC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAATCCCCGAATTTAACTTaGAATTCTGCTTATGAAAGA +
Preference number: 4 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQSPNLT*NSAYER
Trigger: TCTTTCATAAGCAGAATTCCAAGTTAAATTCGGGGA...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACCCATTGAATTGTCTTaGCACTCTGGTTTAAAATCA +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAPIELS*HSGLKS
Trigger: TGATTTTAAACCAGAGTGCCAAGACAATTCAATGGG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACACGGCCACCATGTGTaGCCAGATAGAGATTTTATA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIHGHHV*PDRDFI
Trigger: TATAAAATCTCTATCTGGCCACACATGGTGGCCGTG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAACTCTGATGAATGTATaGGTAATTTCTTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRATLMNV*VISLGT
Trigger: TGTCCCCAAAGAAATTACCCATACATTCATCAGAGT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 72 bp ATTGCTGGATCATATCGTAACTCTACATTTAACCATTaGAAGAACTACCAGACTTTTTCCAAAGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: IAGSYRNSTFNH*KNYQTFSKVAA
Trigger: GGCAGCCACTTTGGAAAAAGTCTGGTAGTTCTTCAAATGGTTAAATGTAGAGTTACGATATGATCCAGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACGAATTGGCTGTAGTTaGTTAGAGTTTCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIRIGCS*LEFLLP
Trigger: TGGTAGCAGAAACTCTAATCAACTACAGCCAATTCG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCCTGTGCTTCATTCTTTaGGTTGTGTACTTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFLCFIL*VVYLAF
Trigger: GAAAGCTAAGTACACAACTCAAAGAATGAAGCACAG...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATGCAGAAAAGCCTGTTaGGCTATTTTGCCCATTTCA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQICRKAC*AILPIS
Trigger: TGAAATGGGCAAAATAGCTCAACAGGCTTTTCTGCA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCTGGCTGCATTCAGTTTaGATCCAAAATCTGATAGTG +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFWLHSV*IQNLIV
Trigger: CACTATCAGATTTTGGATTCAAACTGAATGCAGCCA...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGATCTTAGTCTTATCTaGGGGAGAGATAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIDLSLI*GRDRGI
Trigger: AATGCCTCTATCTCTCCCTCAGATAAGACTAAGATC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTAGAACTAAGACCCTaGCTGAAATCACCATCAGTC +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILELRP*LKSPSV
Trigger: GACTGATGGTGATTTCAGTCAGGGTCTTAGTTCTAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATCTACTTCACTGAGTTaGCTATCATGTTCTGTACGG +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQISTSLS*LSCSVR
Trigger: CCGTACAGAACATGATAGGCAACTCAGTGAAGTAGA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATGCCCTCATCAAGTCTaGATTCTAGTTTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQICPHQV*ILVWET
Trigger: TGTTTCCCAAACTAGAATGCAGACTTGATGAGGGCA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAAGCTTTCAGCTTTGGTaGTTCCCCTTCCATAACAAA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQISFQLW*FPFHNK
Trigger: TTTGTTATGGAAGGGGAACCACCAAAGCTGAAAGCT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAAAGCATTCGAGCATATaGAGGCACTCTCTTAAGACT +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIKHSSI*RHSLKT
Trigger: AGTCTTAAGAGAGTGCCTCCATATGCTCGAATGCTT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAAATAACCTCATGGAATaGGAATCCCTCACAACAGCA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQINNLME*ESLTTA
Trigger: TGCTGTTGTGAGGGATTCCCATTCCATGAGGTTATT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCACAGGACAGTTGTTCTaGGATATTTTCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFTGQLF*DIFKAI
Trigger: GATGGCTTTGAAAATATCCCAGAACAACTGTCCTGT...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGCAGTTTTTACCATTTaGGGAGGTTATTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAAVFTI*GGYFPF
Trigger: AAAAGGAAAATAACCTCCCCAAATGGTAAAAACTGC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 72 bp ACAAAAACAAAATGCAATGATCATTGCACATTGGTCTaGTATTCTACGACCTGGATGAACTCGCTTTATCAG +
Preference number: 4 (lower is better)
Translates to: TKTKCNDHCTLV*YSTTWMNSLYQ
Trigger: CTGATAAAGCGAGTTCATCCAGGTCGTAGAATACAAGACCAATGTGCAATGATCATTGCATTTTGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 72 bp GTGATAAATACTCTGATGAATGTATGGGTAATTTCTTaGGGGACACGTATAGAGCAAATAATTCTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: VINTLMNVWVIS*GTRIEQIILLG
Trigger: CCCAAGCAGAATTATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATTTATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCGATGAGGTATTGGGTTaGCTAGATTCTGAAATTAGA +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFDEVLG*LDSEIR
Trigger: TCTAATTTCAGAATCTAGTCAACCCAATACCTCATC...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCGGATATATTATGAGATaGGGTATTGGGTTGACTAGA +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFGYIMR*GIGLTR
Trigger: TCTAGTCAACCCAATACCTCATCTCATAATATATCC...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGGGATTATAAAGTTATaGCATGTGAGCTGGTCCTTA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIGIIKL*HVSWSL
Trigger: TAAGGACCAGCTCACATGTCATAACTTTATAATCCC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACATCAGAGCAGTTACTaGAACCAGTATTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIHQSSY*NQYCLK
Trigger: TTTCAAGCAATACTGGTTGCAGTAACTGCTCTGATG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCGTAACAGTCAACATGTaGGTCCTTTGTATTCATAGT +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFVTVNM*VLCIHS
Trigger: ACTATGAATACAAAGGACCCACATGTTGACTGTTAC...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAAACAAATCAGGTCTTTaGTACCTGATAACCTTCACC +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQINKSGL*YLITFT
Trigger: GGTGAAGGTTATCAGGTACCAAAGACCTGATTTGTT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAACAGGACAGTTGTTCTaGGATATTTTCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQITGQLF*DIFKAI
Trigger: GATGGCTTTGAAAATATCCCAGAACAACTGTCCTGT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACTTAGTTTTAATCTCTaGCGTAAAGGAAGAGGGCTA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILSFNL*RKGRGL
Trigger: TAGCCCTCTTCCTTTACGCCAGAGATTAAAACTAAG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAATACCTGTGAACTTCTaGGGATACATAAGGAGTTAC +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIIPVNF*GYIRSY
Trigger: GTAACTCCTTATGTATCCCCAGAAGTTCACAGGTAT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTGGAATTCTGCTTATaGAAGATTTCACATGTGGGT +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILEFCL*KISHVG
Trigger: ACCCACATGTGAAATCTTTCATAAGCAGAATTCCAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACAGTCCTTAAAGAGTTaGGATGATACAAGGTTTGTA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIQSLKS*DDTRFV
Trigger: TACAAACCTTGTATCATCTCAACTCTTTAAGGACTG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR TCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTACAAGTGATAACATaGCCACATCAAGGAACAAGA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILQVIT*PHQGTR
Trigger: TCTTGTTCCTTGATGTGGTCATGTTATCACTTGTAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCCATGAACTGTTCTTGTaGATTCAAACATGGAGTATT +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFHELFL*IQTWSI
Trigger: AATACTCCATGTTTGAATGCACAAGAACAGTTCATG...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCCATAAGGAGTTACTTTaGTCAGTTTATTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFHKELL*SVYSAI
Trigger: AATGGCTGAATAAACTGAGCAAAGTAACTCCTTATG...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGCTCATTACTTCATCTaGTTCTGGCAAATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIAHYFI*FWQIVF
Trigger: GAAAACAATTTGCCAGAACCAGATGAAGTAATGAGC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACTACTCAACTTGTTATaGCCACTTTCTTTGAAATGG +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILLNLL*PLSLKW
Trigger: CCATTTCAAAGAAAGTGGCCATAACAAGTTGAGTAG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCCTCTTGGGAACAAGCTaGAATATAAATACTTTAGAG +
Preference number: 4 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFLLGTS*NINTLE
Trigger: CTCTAAAGTATTTATATTCCAGCTTGTTCCCAAGAG...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
3UTR CAA 72 bp CCTGGGTGTTTCATAAATCACTTTCTGACTTTCAGATaGAAAGCATTTATTAAAGAACAGCCGTTTCTGATT +
Preference number: 4 (lower is better)
Translates to: PGCFINHFLTFR*KAFIKEQPFLI
Trigger: AATCAGAAACGGCTGTTCTTTAATAAATGCTTTCAATCTGAAAGTCAGAAAGTGATTTATGAAACACCCAGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR GCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACATAAGGAGTTACTTTaGTCAGTTTATTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIHKELL*SVYSAI
Trigger: AATGGCTGAATAAACTGAGCAAAGTAACTCCTTATG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGAAAGATTTCACATGTaGGTTTTAAAGTCATGTGTG +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIERFHM*VLKSCV
Trigger: CACACATGACTTTAAAACCCACATGTGAAATCTTTC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATCCCCGAATTTAACTTaGAATTCTGCTTATGAAAGA +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQISPNLT*NSAYER
Trigger: TCTTTCATAAGCAGAATTCCAAGTTAAATTCGGGGA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CCA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATCTAGTTGGGTGACCTaGAAAAATTTTAAACTCACT +
Preference number: 4 (lower is better)
Translates to: NTLMNVWVISLGTRIEQISSWVT*KNFKLT
Trigger: AGTGAGTTTAAAATTTTTCCAGGTCACCCAACTAGA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS CCA 90 bp GCGAACAAAGAGCTCGTCCGTAAGCCAGATGGTCAAAGGAATCAGTaGGAGGACCCGGGCGGCGCCGTCTCTCCACGTCCCGCGGGACTT +
Preference number: 5 (lower is better)
Translates to: ANKELVRKPDGQRNQ*EDPGGAVSPRPAGL
Trigger: AAGTCCCGCGGGACGTGGAGAGACGGCGCCGCCCGGGTCCTCCCACTGATTCCTTTGACCATCTGGCTTACGGACGAGCTCTTTGTTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS TCA 90 bp TTACTTGTTAGGTCAGCATATTCATGGGAAGGGTTGTGTAAAGACTaGAGCGGGAGTGTGGGGTTGAGAAGGGCGCTGAAACCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: LLVRSAYSWEGLCKD*SGSVGLRRALKPKP
Trigger: TGGCTTAGGTTTCAGCGCCCTTCTCAACCCCACACTCCCGCTTCAGTCTTTACACAACCCTTCCCATGAATATGCTGACCTAACAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGCTGAGGCATGTGAATaGCGTGAACCTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQAEACE*REPGRQ
Trigger: CTGCCTCCCAGGTTCACGCAATTCACATGCCTCAGC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCGCTGGAGGCAGATCTTaGGCAGAGTATTTCAAAGGG +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCAGGRS*AEYFKG
Trigger: CCCTTTGAAATACTCTGCCAAAGATCTGCCTCCAGC...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTCTTGGCAGGGCGTCTaGAAGTGGCTAAAGGCGACT +
Preference number: 5 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGSWQGV*KWLKAT
Trigger: AGTCGCCTTTAGCCACTTCAAGACGCCCTGCCAAGA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGCACTGTTTTGGACTATaGCTGGGGCTGACTCTGCAG +
Preference number: 5 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGHCFGL*LGLTLQ
Trigger: CTGCAGAGTCAGCCCCAGCAATAGTCCAAAACAGTG...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAAGGGTCAGCCTACTTaGCTGATAACTCTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGKGQPT*LITLPS
Trigger: GGAGGGCAGAGTTATCAGCAAAGTAGGCTGACCCTT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAACTCCAGGGACTCCCTTaGGGAGATAATCACAGCCAA +
Preference number: 5 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQLQGLP*GDNHSQ
Trigger: TTGGCTGTGATTATCTCCCAAAGGGAGTCCCTGGAG...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCGTCTCTGGATTCATTTaGCAAGGGAATTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCVSGFI*QGNSWK
Trigger: CTTCCAGGAATTCCCTTGCAAAATGAATCCAGAGAC...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCAAACACTGGGGCACTTaGTTCATCAGAGGAATGTCT +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCKHWGT*FIRGMS
Trigger: AGACATTCCTCTGATGAACAAAGTGCCCCAGTGTTT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTACCTGGGAGAGGAATaGCTGGATCATATCGTAACT +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCYLGEE*LDHIVT
Trigger: AGTTACGATATGATCCAGCAATTCCTCTCCCAGGTA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCACCAAAAGGCAGTGCTaGGCTGCATTCAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCTKRQC*AAFSLN
Trigger: ATTCAAACTGAATGCAGCCAAGCACTGCCTTTTGGT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAAAGGGTCAGCCTACTTaGCTGATAACTCTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQKGQPT*LITLPS
Trigger: GGAGGGCAGAGTTATCAGCAAAGTAGGCTGACCCTT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACTCCAGGGACTCCCTTaGGGAGATAATCACAGCCAA +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRALQGLP*GDNHSQ
Trigger: TTGGCTGTGATTATCTCCCAAAGGGAGTCCCTGGAG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCGACTTTATAGTCTTCTaGAAGCAGCTGGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCDFIVF*KQLVSF
Trigger: AAAGGAGACCAGCTGCTTCAAGAAGACTATAAAGTC...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCGCTGAGGCATGTGAATaGCGTGAACCTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFAEACE*REPGRQ
Trigger: CTGCCTCCCAGGTTCACGCAATTCACATGCCTCAGC...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTGTTTCCTTTTCCCATaGAATTGTCTTGGCACTCTG +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCCFLFP*NCLGTL
Trigger: CAGAGTGCCAAGACAATTCAATGGGAAAAGGAAACA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGCTGGAGGCAGATCTTaGGCAGAGTATTTCAAAGGG +
Preference number: 5 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQAGGRS*AEYFKG
Trigger: CCCTTTGAAATACTCTGCCAAAGATCTGCCTCCAGC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCGTATGGGTAATTTCTTaGGGGACACGTATAGAGCAA +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCVWVIS*GTRIEQ
Trigger: TTGCTCTATACGTGTCCCCAAAGAAATTACCCATAC...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACAGAAAGCAAGCATCTaGGCAGGGCGTCTTGAAGTG +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAQKASI*AGRLEV
Trigger: CACTTCAAGACGCCCTGCCAAGATGCTTGCTTTCTG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCAGACATGAACTGTTCTaGTGCATTCAAACATGGAGT +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCRHELF*CIQTWS
Trigger: ACTCCATGTTTGAATGCACAAGAACAGTTCATGTCT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCACTGACAGCTTTAATTaGCTGTATAGCCAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCTDSFN*LYSQRS
Trigger: AGACCTTTGGCTATACAGCAAATTAAAGCTGTCAGT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCAACTCAGAGAACTTTTaGTTGAATCTGGGAAACAGC +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCNSENF*LNLGNS
Trigger: GCTGTTTCCCAGATTCAACAAAAAGTTCTCTGAGTT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCAGATGGGTGGATCGCTaGAGGCCAGGAGTTCATGAC +
Preference number: 5 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFRWVDR*RPGVHD
Trigger: GTCATGAACTCCTGGCCTCAAGCGATCCACCCATCT...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAAAAAGCCTAAGAACCTaGCTCAAAGTGGGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQKSLRT*LKVGAP
Trigger: TGGAGCACCCACTTTGAGCAAGGTTCTTAGGCTTTT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCATCCACCCGGTTAGATTaGGTCTCTCTCCACAGAGAA +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRASTRLD*VSLHRE
Trigger: TTCTCTGTGGAGAGAGACCAAATCTAACCGGGTGGA...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGACAACCCTTCCTCCTaGGCTCTGGAAGAAGCCCCT +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIDNPSS*ALEEAP
Trigger: AGGGGCTTCTTCCAGAGCCAAGGAGGAAGGGTTGTC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381254.7
CDS TCA 90 bp TTACCGGAGGCCAGAATTTCAACATCAATTTATTTGGAGGTGGAGTaGGGTGGCAGTCAATGCATTATTTTCCCCACACAGAAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: LPEARISTSIYLEVE*GGSQCIIFPTQKRR
Trigger: TCTTCTCTTCTGTGTGGGGAAAATAATGCATTGACTGCCACCTCACTCCACCTCCAAATAAATTGATGTTGAAATTCTGGCCTCCGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAAACAGGCTCCAAAATTaGCCACAAGTCATTCACTCC +
Preference number: 5 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQNRLQN*PQVIHS
Trigger: GGAGTGAATGACTTGTGGCAAATTTTGGAGCCTGTT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAAAAGTATCTCCATCATaGGTGAGGCAGCCATCGACA +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAKVSPS*VRQPST
Trigger: TGTCGATGGCTGCCTCACCAATGATGGAGATACTTT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCACTGTGCTTCATTCTTaGAGTTGTGTACTTAGCTTT +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCTVLHS*SCVLSF
Trigger: AAAGCTAAGTACACAACTCAAAGAATGAAGCACAGT...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTTAGGGCTACTCAACTaGTTATGGCCACTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGLGLLN*LWPLSL
Trigger: CAAAGAAAGTGGCCATAACAAGTTGAGTAGCCCTAA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCCAGCTGGCTGTTGTACATAGAAAAGCCTAAGAACCTTGCTCAAAGTGGGTGCTGTACAGAAATACAATaGAGGCTGAGTATGGTGATT +
Preference number: 5 (lower is better)
Translates to: SSWLLYIEKPKNLAQSGCCTEIQ*RLSMVI
Trigger: AATCACCATACTCAGCCTCAATTGTATTTCTGTACA...GCACCCACTTTGAGCAAGGTTCTTAGGCTTTTCTATGTACAACAGCCAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTGTTTCCTTTTCCCATaGAATTGTCTTGGCACTCTG +
Preference number: 5 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGCFLFP*NCLGTL
Trigger: CAGAGTGCCAAGACAATTCAATGGGAAAAGGAAACA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGAGATCCAGAAGACAGTaGGTTCAAAGACTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGRSRRQ*VQRLFP
Trigger: AGGAAACAGTCTTTGAACCAACTGTCTTCTGGATCT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGGGGTGTCTTGTGGTTTaGATTTGCATTTTCCTGATG +
Preference number: 5 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGGCLVV*ICIFLM
Trigger: CATCAGGAAAATGCAAATCAAAACCACAAGACACCC...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAAAAAGCCTAAGAACCTaGCTCAAAGTGGGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAKSLRT*LKVGAP
Trigger: TGGAGCACCCACTTTGAGCAAGGTTCTTAGGCTTTT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS GCA 90 bp CAACAGCAAGCTTTCTTCTTAATATTGTTCTCTACTTCACTGAGTTaGCTATCATGTTCTGTACGGTGCCACTCACAAGGACAGCAGTAT +
Preference number: 5 (lower is better)
Translates to: QQQAFFLILFSTSLS*LSCSVRCHSQGQQY
Trigger: ATACTGCTGTCCTTGTGAGTGGCACCGTACAGAACATGATAGGCAACTCAGTGAAGTAGAGAACAATATTAAGAAGAAAGCTTGCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317402.11
ENST00000381254.7
ENST00000528873.2
ENST00000534451.2
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAAACAGGCTCCAAAATTaGCCACAAGTCATTCACTCC +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRANRLQN*PQVIHS
Trigger: GGAGTGAATGACTTGTGGCAAATTTTGGAGCCTGTT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCACACAGCCAAGAAGTATaGCTAATCCAACCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAHSQEV*LIQPEH
Trigger: ATGCTCTGGTTGGATTAGCAATACTTCTTGGCTGTG...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAGACTTTATAGTCTTCTaGAAGCAGCTGGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQDFIVF*KQLVSF
Trigger: AAAGGAGACCAGCTGCTTCAAGAAGACTATAAAGTC...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCATTTGGTGGTCTAACATaGCAGGTCTTTACCACTGTG +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAFGGLT*QVFTTV
Trigger: CACAGTGGTAAAGACCTGCAATGTTAGACCACCAAA...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAACCTTTTCCCATTGAATaGTCTTGGCACTCTGGTTTA +
Preference number: 5 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQPFPIE*SWHSGL
Trigger: TAAACCAGAGTGCCAAGACAATTCAATGGGAAAAGG...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGATTCTGGAACTGGGATaGTTTCCACTTTTAGGCTAT +
Preference number: 5 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGILELG*FPLLGY
Trigger: ATAGCCTAAAAGTGGAAACAATCCCAGTTCCAGAAT...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAACCAAAAGGCAGTGCTaGGCTGCATTCAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRATKRQC*AAFSLN
Trigger: ATTCAAACTGAATGCAGCCAAGCACTGCCTTTTGGT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCGCCTCCAGCTGGCTGTaGTACATAGAAAAGCCTAAG +
Preference number: 5 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFASSWL*YIEKPK
Trigger: CTTAGGCTTTTCTATGTACAACAGCCAGCTGGAGGC...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGGGCGTTGTGGAGAATaGTCATTCATGCATCTAGTA +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAGRCGE*SFMHLV
Trigger: TACTAGATGCATGAATGACAATTCTCCACAACGCCC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCTCCACCCGGTTAGATTaGGTCTCTCTCCACAGAGAA +
Preference number: 5 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFSTRLD*VSLHRE
Trigger: TTCTCTGTGGAGAGAGACCAAATCTAACCGGGTGGA...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACAGAAAGCAAGCATCTaGGCAGGGCGTCTTGAAGTG +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIQKASI*AGRLEV
Trigger: CACTTCAAGACGCCCTGCCAAGATGCTTGCTTTCTG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATACACTGTTTTGGACTATaGCTGGGGCTGACTCTGCAG +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIHCFGL*LGLTLQ
Trigger: CTGCAGAGTCAGCCCCAGCAATAGTCCAAAACAGTG...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS CCA 90 bp ATACCGAGACTGATTCCTCTTGCTTATGACATCAGCTTTCAGCTTTaGTGGTTCCCCTTCCATAACAAATACCAGTTTTACATCCATTTG +
Preference number: 5 (lower is better)
Translates to: IPRLIPLAYDISFQL*WFPFHNKYQFYIHL
Trigger: CAAATGGATGTAAAACTGGTATTTGTTATGGAAGGGGAACCACCAAAGCTGAAAGCTGATGTCATAAGCAAGAGGAATCAGTCTCGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317402.11
ENST00000381254.7
ENST00000524465.5
ENST00000534669.1
CDS-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAACTGACAGCTTTAATTaGCTGTATAGCCAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQTDSFN*LYSQRS
Trigger: AGACCTTTGGCTATACAGCAAATTAAAGCTGTCAGT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTTCCTGGAAGATCCTTaGAAAGATGTGATGTACAAT +
Preference number: 5 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGFLEDP*KDVMYN
Trigger: ATTGTACATCACATCTTTCAAAGGATCTTCCAGGAA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGTTATGGCCACTTTCTTaGAAATGGGATGAATTATGC +
Preference number: 5 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGLWPLS*KWDELC
Trigger: GCATAATTCATCCCATTTCAAAGAAAGTGGCCATAA...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AACACTGTTCTAGAATTCTGTGAACAGAAAGGACTTAGTCCCTGCCCTCATCAAAATGATCATTGCACATaGGTCTTGTATTCTACGACC +
Preference number: 5 (lower is better)
Translates to: NTVLEFCEQKGLSPCPHQNDHCT*VLYSTT
Trigger: GGTCGTAGAATACAAGACCAATGTGCAATGATCATT...TTGATGAGGGCAGGGACTAAGTCCTTTCTGTTCACAGAATTCTAGAACAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TCAGAAGTACAATATAGTTTCTCTGCCCTGAGGATGTTCATAGTCTGGTGTGGGGTGTATTCTCTTTTGTaGCCTATGCTTTGGGTATAT +
Preference number: 5 (lower is better)
Translates to: SEVQYSFSALRMFIVWCGVYSLL*PMLWVY
Trigger: ATATACCCAAAGCATAGGCAACAAAAGAGAATACAC...CCCACACCAGACTATGAACATCCTCAGGGCAGAGAAACTATATTGTACTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGCCAAGGACTTAAGATaGATTACACAAAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAAKDLR*ITQSPK
Trigger: CTTTGGGCTTTGTGTAATCAATCTTAAGTCCTTGGC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGCCTCCAGCTGGCTGTaGTACATAGAAAAGCCTAAG +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIASSWL*YIEKPK
Trigger: CTTAGGCTTTTCTATGTACAACAGCCAGCTGGAGGC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCCACAGCCAAGAAGTATaGCTAATCCAACCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFHSQEV*LIQPEH
Trigger: ATGCTCTGGTTGGATTAGCAATACTTCTTGGCTGTG...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAAGACATGAACTGTTCTaGTGCATTCAAACATGGAGT +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRARHELF*CIQTWS
Trigger: ACTCCATGTTTGAATGCACAAGAACAGTTCATGTCT...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCAGACAAAGTTTTCAGGTaGACATCTGGTTGTAGATTA +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRADKVFR*TSGCRL
Trigger: TAATCTACAACCAGATGTCAACCTGAAAACTTTGTC...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGTCTCTGGATTCATTTaGCAAGGGAATTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIVSGFI*QGNSWK
Trigger: CTTCCAGGAATTCCCTTGCAAAATGAATCCAGAGAC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTTGGTGGTCTAACATaGCAGGTCTTTACCACTGTG +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIFGGLT*QVFTTV
Trigger: CACAGTGGTAAAGACCTGCAATGTTAGACCACCAAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp TTCTGGGGATACATAAGGAGTTACTTTGCTCAGTTTATTCAGCCATTACGAGCATTTGTGTATTCTCTTTaGTTGCCTATGCTTTGGGTA +
Preference number: 5 (lower is better)
Translates to: FWGYIRSYFAQFIQPLRAFVYSL*LPMLWV
Trigger: TACCCAAAGCATAGGCAACAAAAGAGAATACACAAA...TGCTCGTAATGGCTGAATAAACTGAGCAAAGTAACTCCTTATGTATCCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGGGCGTTGTGGAGAATaGTCATTCATGCATCTAGTA +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIGRCGE*SFMHLV
Trigger: TACTAGATGCATGAATGACAATTCTCCACAACGCCC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCGTATGGGTAATTTCTTaGGGGACACGTATAGAGCAA +
Preference number: 5 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFVWVIS*GTRIEQ
Trigger: TTGCTCTATACGTGTCCCCAAAGAAATTACCCATAC...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAAGATCCAGAAGACAGTaGGTTCAAAGACTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIRSRRQ*VQRLFP
Trigger: AGGAAACAGTCTTTGAACCAACTGTCTTCTGGATCT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAGCCAAGGACTTAAGATaGATTACACAAAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIAKDLR*ITQSPK
Trigger: CTTTGGGCTTTGTGTAATCAATCTTAAGTCCTTGGC...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS CCA 90 bp TCCCCGAATTTAACTTGGAATTCTGCTTATGAAAGATTTCACATGTaGGTTTTAAAGTCATGTGTGACTGAAAGCTCATTACTTCATCTG +
Preference number: 5 (lower is better)
Translates to: SPNLTWNSAYERFHM*VLKSCVTESSLLHL
Trigger: CAGATGAAGTAATGAGCTTTCAGTCACACATGACTTTAAAACCCACATGTGAAATCTTTCATAAGCAGAATTCCAAGTTAAATTCGGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317402.11
ENST00000381254.7
ENST00000528873.2
CDS-3UTR CAA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCGACAAAGTTTTCAGGTaGACATCTGGTTGTAGATTA +
Preference number: 5 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFDKVFR*TSGCRL
Trigger: TAATCTACAACCAGATGTCAACCTGAAAACTTTGTC...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCTTCCTGGAAGATCCTTaGAAAGATGTGATGTACAAT +
Preference number: 5 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFFLEDP*KDVMYN
Trigger: ATTGTACATCACATCTTTCAAAGGATCTTCCAGGAA...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCACTGTGCTTCATTCTTaGAGTTGTGTACTTAGCTTT +
Preference number: 5 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFTVLHS*SCVLSF
Trigger: AAAGCTAAGTACACAACTCAAAGAATGAAGCACAGT...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAAACTCAGAGAACTTTTaGTTGAATCTGGGAAACAGC +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQINSENF*LNLGNS
Trigger: GCTGTTTCCCAGATTCAACAAAAAGTTCTCTGAGTT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTGATGCATACAATCTaGTCATCTGCAGACACCATT +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILMHTI*SSADTI
Trigger: AATGGTGTCTGCAGATGACAAGATTGTATGCATCAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp GAATTACATTTAACCTGTAGATCAGTTTGGGGAGTATGGTCATCTTATGTCTTCGTGTATTCTCTTTTGTaGCCTATGCTTTGGGTATAT +
Preference number: 5 (lower is better)
Translates to: ELHLTCRSVWGVWSSYVFVYSLL*PMLWVY
Trigger: ATATACCCAAAGCATAGGCAACAAAAGAGAATACAC...GAAGACATAAGATGACCATACTCCCCAAACTGATCTACAGGTTAAATGTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATAATTCTGGAACTGGGATaGTTTCCACTTTTAGGCTAT +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIILELG*FPLLGY
Trigger: ATAGCCTAAAAGTGGAAACAATCCCAGTTCCAGAAT...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTATGGCCACTTTCTTaGAAATGGGATGAATTATGC +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQILWPLS*KWDELC
Trigger: GCATAATTCATCCCATTTCAAAGAAAGTGGCCATAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS-3UTR CAA 90 bp AATACTCTGATGAATGTATGGGTAATTTCTTTGGGGACACGTATAGAGCAAATATTTGTGTATTCTCTTTaGTTGCCTATGCTTTGGGTA +
Preference number: 5 (lower is better)
Translates to: NTLMNVWVISLGTRIEQIFVYSL*LPMLWV
Trigger: TACCCAAAGCATAGGCAACAAAAGAGAATACACAAA...TATTTGCTCTATACGTGTCCCCAAAGAAATTACCCATACATTCATCAGAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS GCA 72 bp TTAGGCAAATCACTCACCTCCCCCGAGTCCGGTCACTaGGGAGCCGCCCGTGCCTACCAGCTTCCCCCACCC +
Preference number: 6 (lower is better)
Translates to: LGKSLTSPESGH*GAARAYQLPPP
Trigger: GGGTGGGGGAAGCTGGTAGGCACGGGCGGCTCCGCAGTGACCGGACTCGGGGGAGGTGAGTGATTTGCCTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS GCA 72 bp ATTCTGGTGATTATCTGCTCCCCCGAGTCCGGTCACTaGGGAGCCGCCCGTGCCTACCAGCTTCCCCCACCC +
Preference number: 6 (lower is better)
Translates to: ILVIICSPESGH*GAARAYQLPPP
Trigger: GGGTGGGGGAAGCTGGTAGGCACGGGCGGCTCCGCAGTGACCGGACTCGGGGGAGCAGATAATCACCAGAAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317402.11
CDS CCA 72 bp GAGCTCGTCCGTAAGCCAGATGGTCAAAGGAATCAGTaGGAGGACCCGGGCGGCGCCGTCTCTCCACGTCCC +
Preference number: 6 (lower is better)
Translates to: ELVRKPDGQRNQ*EDPGGAVSPRP
Trigger: GGGACGTGGAGAGACGGCGCCGCCCGGGTCCTCCCACTGATTCCTTTGACCATCTGGCTTACGGACGAGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS CCA 72 bp AGGGAGGGCTCTCCCGGGATGGCTTTGAGCGAGGCGTaGGAATTATCCCCATCGCATGCCCGGGGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: REGSPGMALSEA*ELSPSHARGKH
Trigger: GTGCTTCCCCCGGGCATGCGATGGGGATAATTCCCACGCCTCGCTCAAAGCCATCCCGGGAGAGCCCTCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS TCA 72 bp CTATGGGGACCAGGGAGGGCTCTCCCGGGATGGCTTTaGGCGAGGCGTGGGAATTATCCCCATCGCATGCCC +
Preference number: 6 (lower is better)
Translates to: LWGPGRALPGWL*ARRGNYPHRMP
Trigger: GGGCATGCGATGGGGATAATTCCCACGCCTCGCTCAAAGCCATCCCGGGAGAGCCCTCCCTGGTCCCCATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS CAA 72 bp CCTATGGGGACCAGGGAGGGCTCTCCCGGGATGGCTTaGAGCGAGGCGTGGGAATTATCCCCATCGCATGCC +
Preference number: 6 (lower is better)
Translates to: PMGTREGSPGMA*SEAWELSPSHA
Trigger: GGCATGCGATGGGGATAATTCCCACGCCTCGCTCAAAGCCATCCCGGGAGAGCCCTCCCTGGTCCCCATAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS CCA 72 bp CCCTCGCGAGTGGAAAACAGGGGCCAAGTCGCGGCCTaGCGGCTCGGTTCGGACTTCCTACTTTATTCAAAG +
Preference number: 6 (lower is better)
Translates to: PSRVENRGQVAA*RLGSDFLLYSK
Trigger: CTTTGAATAAAGTAGGAAGTCCGAACCGAGCCGCCAGGCCGCGACTTGGCCCCTGTTTTCCACTCGCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS CCA 72 bp GCGGGACTTACCCGGACAACCCTTCCTCCTTGGCTCTaGAAGAAGCCCCTTCGTCATTTACCAGTTTGGCCT +
Preference number: 6 (lower is better)
Translates to: AGLTRTTLPPWL*KKPLRHLPVWP
Trigger: AGGCCAAACTGGTAAATGACGAAGGGGCTTCTTCCAGAGCCAAGGAGGAAGGGTTGTCCGGGTAAGTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS CAA 90 bp CCTGGCGGCTCGGTTCGGACTTCCTACTTTATTCAAAGGGAGTCATaGAAGGCGTTTTCGGAGGAGCAGCGAACAAAGAGCTCGTCCGTA +
Preference number: 6 (lower is better)
Translates to: PGGSVRTSYFIQRES*KAFSEEQRTKSSSV
Trigger: TACGGACGAGCTCTTTGTTCGCTGCTCCTCCGAAAACGCCTTCAATGACTCCCTTTGAATAAAGTAGGAAGTCCGAACCGAGCCGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS CCA 72 bp GTGATTATCTGCCGGACAACCCTTCCTCCTTGGCTCTaGAAGAAGCCCCTTCGTCATTTACCAGTTTGGCCT +
Preference number: 6 (lower is better)
Translates to: VIICRTTLPPWL*KKPLRHLPVWP
Trigger: AGGCCAAACTGGTAAATGACGAAGGGGCTTCTTCCAGAGCCAAGGAGGAAGGGTTGTCCGGCAGATAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381254.7
ENST00000524465.5
CDS CCA 72 bp TGTGAAACACACCGGACAACCCTTCCTCCTTGGCTCTaGAAGAAGCCCCTTCGTCATTTACCAGTTTGGCCT +
Preference number: 6 (lower is better)
Translates to: CETHRTTLPPWL*KKPLRHLPVWP
Trigger: AGGCCAAACTGGTAAATGACGAAGGGGCTTCTTCCAGAGCCAAGGAGGAAGGGTTGTCCGGTGTGTTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532257.1
CDS TCA 72 bp AGGTCAGCATATTCATGGGAAGGGTTGTGTAAAGACTaGAGCGGGAGTGTGGGGTTGAGAAGGGCGCTGAAA +
Preference number: 6 (lower is better)
Translates to: RSAYSWEGLCKD*SGSVGLRRALK
Trigger: TTTCAGCGCCCTTCTCAACCCCACACTCCCGCTTCAGTCTTTACACAACCCTTCCCATGAATATGCTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS CAA 72 bp CATTCTGGTGATTATCTGCCGGACAACCCTTCCTCCTaGGCTCTGGAAGAAGCCCCTTCGTCATTTACCAGT +
Preference number: 6 (lower is better)
Translates to: HSGDYLPDNPSS*ALEEAPSSFTS
Trigger: ACTGGTAAATGACGAAGGGGCTTCTTCCAGAGCCAAGGAGGAAGGGTTGTCCGGCAGATAATCACCAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381254.7
ENST00000524465.5
CDS GCA 72 bp TGTCTGTGCCTCACACACCCAGAGACTCAGATCAACTaGAATGGTTTTCCCACCAAGATTACGCAAGGGGAT +
Preference number: 6 (lower is better)
Translates to: CLCLTHPETQIN*NGFPTKITQGD
Trigger: ATCCCCTTGCGTAATCTTGGTGGGAAAACCATTGCAGTTGATCTGAGTCTCTGGGTGTGTGAGGCACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317402.11
ENST00000381254.7
ENST00000524465.5
ENST00000532257.1
CDS CCA 72 bp GTGCCTCACACACCCAGAGACTCAGATCAACTGCAATaGTTTTCCCACCAAGATTACGCAAGGGGATGTGTT +
Preference number: 6 (lower is better)
Translates to: VPHTPRDSDQLQ*FSHQDYARGCV
Trigger: AACACATCCCCTTGCGTAATCTTGGTGGGAAAACCATTGCAGTTGATCTGAGTCTCTGGGTGTGTGAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317402.11
ENST00000381254.7
ENST00000524465.5
ENST00000532257.1
CDS CCA 72 bp ATTCTGGTGATTATCTGCCGGACAACCCTTCCTCCTTaGCTCTGGAAGAAGCCCCTTCGTCATTTACCAGTT +
Preference number: 6 (lower is better)
Translates to: ILVIICRTTLPP*LWKKPLRHLPV
Trigger: AACTGGTAAATGACGAAGGGGCTTCTTCCAGAGCCAAGGAGGAAGGGTTGTCCGGCAGATAATCACCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381254.7
ENST00000524465.5
CDS CCA 72 bp CTGTTATGTGAAACACACCGGACAACCCTTCCTCCTTaGCTCTGGAAGAAGCCCCTTCGTCATTTACCAGTT +
Preference number: 6 (lower is better)
Translates to: LLCETHRTTLPP*LWKKPLRHLPV
Trigger: AACTGGTAAATGACGAAGGGGCTTCTTCCAGAGCCAAGGAGGAAGGGTTGTCCGGTGTGTTTCACATAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532257.1
CDS TCA 72 bp CGGTTCGGACTTCCTACTTTATTCAAAGGGAGTCATTaGAGGCGTTTTCGGAGGAGCAGCGAACAAAGAGCT +
Preference number: 6 (lower is better)
Translates to: RFGLPTLFKGSH*RRFRRSSEQRA
Trigger: AGCTCTTTGTTCGCTGCTCCTCCGAAAACGCCTTCAATGACTCCCTTTGAATAAAGTAGGAAGTCCGAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS CAA 90 bp CAACTCCAGGGACTCCCTTTGGGAGATAATCACAGCCAAGAAGTATaGCTAATCCAACCAGAGCATCTCTATCCAAACCTAGTTTACTCT +
Preference number: 6 (lower is better)
Translates to: QLQGLPLGDNHSQEV*LIQPEHLYPNLVYS
Trigger: AGAGTAAACTAGGTTTGGATAGAGATGCTCTGGTTGGATTAGCAATACTTCTTGGCTGTGATTATCTCCCAAAGGGAGTCCCTGGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS CAA 72 bp GGACTCCCTTTGGGAGATAATCACAGCCAAGAAGTATaGCTAATCCAACCAGAGCATCTCTATCCAAACCTA +
Preference number: 6 (lower is better)
Translates to: GLPLGDNHSQEV*LIQPEHLYPNL
Trigger: TAGGTTTGGATAGAGATGCTCTGGTTGGATTAGCAATACTTCTTGGCTGTGATTATCTCCCAAAGGGAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS CAA 72 bp AGTTGTGTACTTAGCTTTCCCAAACACTGGGGCACTTaGTTCATCAGAGGAATGTCTGTCAAGGCAAACACT +
Preference number: 6 (lower is better)
Translates to: SCVLSFPKHWGT*FIRGMSVKANT
Trigger: AGTGTTTGCCTTGACAGACATTCCTCTGATGAACAAAGTGCCCCAGTGTTTGGGAAAGCTAAGTACACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS TCA 72 bp GCCAGAATTTCAACATCAATTTATTTGGAGGTGGAGTaGGGTGGCAGTCAATGCATTATTTTCCCCACACAG +
Preference number: 6 (lower is better)
Translates to: ARISTSIYLEVE*GGSQCIIFPTQ
Trigger: CTGTGTGGGGAAAATAATGCATTGACTGCCACCTCACTCCACCTCCAAATAAATTGATGTTGAAATTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS CAA 90 bp ACAACAGCAAGCTTTCTTCTTAATATTGTTCTCTACTTCACTGAGTaGCCTATCATGTTCTGTACGGTGCCACTCACAAGGACAGCAGTA +
Preference number: 6 (lower is better)
Translates to: TTASFLLNIVLYFTE*PIMFCTVPLTRTAV
Trigger: TACTGCTGTCCTTGTGAGTGGCACCGTACAGAACATGATAGGCAACTCAGTGAAGTAGAGAACAATATTAAGAAGAAAGCTTGCTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317402.11
ENST00000381254.7
ENST00000528873.2
ENST00000534451.2
CDS CAA 90 bp CATTCTTTGAGTTGTGTACTTAGCTTTCCCAAACACTGGGGCACTTaGTTCATCAGAGGAATGTCTGTCAAGGCAAACACTCTTCTTCAT +
Preference number: 6 (lower is better)
Translates to: HSLSCVLSFPKHWGT*FIRGMSVKANTLLH
Trigger: ATGAAGAAGAGTGTTTGCCTTGACAGACATTCCTCTGATGAACAAAGTGCCCCAGTGTTTGGGAAAGCTAAGTACACAACTCAAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS CAA 90 bp CGTGTTTCCCATTGGTTACAACAAGGCCAGATGTTTTGGTCTATTTaGACTATGTCATATTTTTCGTTGATCCATGGCAAGGGCCACAGT +
Preference number: 6 (lower is better)
Translates to: RVSHWLQQGQMFWSI*TMSYFSLIHGKGHS
Trigger: ACTGTGGCCCTTGCCATGGATCAACGAAAAATATGACATAGTCAAAATAGACCAAAACATCTGGCCTTGTTGTAACCAATGGGAAACACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS CAA 90 bp ACCTCCCAACCGTGTTTCCCATTGGTTACAACAAGGCCAGATGTTTaGGTCTATTTTGACTATGTCATATTTTTCGTTGATCCATGGCAA +
Preference number: 6 (lower is better)
Translates to: TSQPCFPLVTTRPDV*VYFDYVIFFVDPWQ
Trigger: TTGCCATGGATCAACGAAAAATATGACATAGTCAAAATAGACCAAAACATCTGGCCTTGTTGTAACCAATGGGAAACACGGTTGGGAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614478.1
CDS CAA 72 bp TCCCATCAGAATCCTCATCCAACACTTTCTTTATGTTaGCAGTGTACCTTTCTGATTCACAGGACAGTTGTT +
Preference number: 6 (lower is better)
Translates to: SHQNPHPTLSLC*QCTFLIHRTVV
Trigger: AACAACTGTCCTGTGAATCAGAAAGGTACACTGCAAACATAAAGAAAGTGTTGGATGAGGATTCTGATGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS TCA 72 bp TTATCACTTTTACATAATCTGCATCCATTACGTTCATaGTCCTTAGGTGAACCTGGATGGGAACATACGGAA +
Preference number: 6 (lower is better)
Translates to: LSLLHNLHPLRS*SLGEPGWEHTE
Trigger: TTCCGTATGTTCCCATCCAGGTTCACCTAAGGATCATGAACGTAATGGATGCAGATTATGTAAAAGTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317402.11
ENST00000381254.7
ENST00000528873.2
CDS TCA 72 bp CTGATTCGAGTCTTAACAATTCGAATTGGCTGTAGTTaGTTAGAGTTTCTGCTACCAAGCTTTCTTTCTATC +
Preference number: 6 (lower is better)
Translates to: LIRVLTIRIGCS*LEFLLPSFLSI
Trigger: GATAGAAAGAAAGCTTGGTAGCAGAAACTCTAATCAACTACAGCCAATTCGAATTGTTAAGACTCGAATCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317402.11
ENST00000381254.7
ENST00000528873.2
CDS TCA 72 bp CCATACAGTTCTTTACATTACCGAATTGGCTGTAGTTaGTTAGAGTTTCTGCTACCAAGCTTTCTTTCTATC +
Preference number: 6 (lower is better)
Translates to: PYSSLHYRIGCS*LEFLLPSFLSI
Trigger: GATAGAAAGAAAGCTTGGTAGCAGAAACTCTAATCAACTACAGCCAATTCGGTAATGTAAAGAACTGTATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534451.2
CDS CCA 72 bp ACAGTTGTTCTGGGATATTTTCAAAGCCATCAGGGATaGCTGATAGCTCTGATTCAACTTCTGATTTTAAAT +
Preference number: 6 (lower is better)
Translates to: TVVLGYFQSHQG*LIALIQLLILN
Trigger: ATTTAAAATCAGAAGTTGAATCAGAGCTATCAGCCATCCCTGATGGCTTTGAAAATATCCCAGAACAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317402.11
ENST00000381254.7
CDS GCA 72 bp TTAAATGTCTACTATTTAACAGGAAAGCTTTATAGGTaGTGGAGATACAATAATGGAAGATCAAGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: LNVYYLTGKLYR*WRYNNGRSSPA
Trigger: TGCAGGGCTTGATCTTCCATTATTGTATCTCCAGCACCTATAAAGCTTTCCTGTTAAATAGTAGACATTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614478.1