RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GDPD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000130055

Ensembl transcript IDs: ENST00000374382.4, ENST00000453994.6, ENST00000472623.1, ENST00000536730.5, ENST00000538649.5

Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCGTAGACTGGCTTGGGTaGGGAAGCAGGGCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGVDWLG*GSRAGH
Trigger: ATGCCCTGCCCTGCTTCCCCACCCAAGCCAGTCTAC...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR CCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAGTAGACTGGCTTGGGTaGGGAAGCAGGGCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKVDWLG*GSRAGH
Trigger: ATGCCCTGCCCTGCTTCCCCACCCAAGCCAGTCTAC...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR CCA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCTTGGGCAATGTAGACTaGCTTGGGTGGGGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTLGNVD*LGWGSR
Trigger: CCTGCTTCCCCACCCAAGCCAGTCTACATTGCCCAA...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR CCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAATTGGGCAATGTAGACTaGCTTGGGTGGGGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKLGNVD*LGWGSR
Trigger: CCTGCTTCCCCACCCAAGCCAGTCTACATTGCCCAA...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR GCA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCCACTCTCCAACCCTTaGTGTTTGGGCAATGTAGAC +
Preference number: 2 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPPLSNP*CLGNVD
Trigger: GTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGG...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR CCA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTTTGGGCAATGTAGACTaGCTTGGGTGGGGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLALGNVD*LGWGSR
Trigger: CCTGCTTCCCCACCCAAGCCAGTCTACATTGCCCAA...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR GCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCCCACTCTCCAACCCTTaGTGTTTGGGCAATGTAGAC +
Preference number: 2 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGPLSNP*CLGNVD
Trigger: GTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGG...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR TCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCGCAACCCACCACCCCTaGAGCATTCCACTTAAGCCA +
Preference number: 2 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNAATHHP*SIPLKP
Trigger: TGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGC...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR CCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACGGAATGCCCATCACCTaGGCAGAGGGCCCTCATGGT +
Preference number: 2 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNGMPIT*AEGPHG
Trigger: ACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCC...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR TCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACGCAACCCACCACCCCTaGAGCATTCCACTTAAGCCA +
Preference number: 2 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNATHHP*SIPLKP
Trigger: TGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGC...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR CCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACGGCAGAGGGCCCTCATaGTTCAAAACCTCCTGTTGG +
Preference number: 2 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNGRGPS*FKTSCW
Trigger: CCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCC...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR CCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAAGGCAGAGGGCCCTCATaGTTCAAAACCTCCTGTTGG +
Preference number: 2 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKGRGPS*FKTSCW
Trigger: CCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCC...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR GCA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGCCACTCTCCAACCCTTaGTGTTTGGGCAATGTAGAC +
Preference number: 2 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRPLSNP*CLGNVD
Trigger: GTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGG...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR CAA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCGCCACTCTCCAACCCTaGCTGTTTGGGCAATGTAGA +
Preference number: 3 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPATLQP*LFGQCR
Trigger: TCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR CAA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGGCCACTCTCCAACCCTaGCTGTTTGGGCAATGTAGA +
Preference number: 3 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWATLQP*LFGQCR
Trigger: TCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR CAA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAATCCAACCCTTGCTGTTaGGGCAATGTAGACTGGCTT +
Preference number: 3 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKSNPCC*GNVDWL
Trigger: AAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGA...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR CAA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCTCCAACCCTTGCTGTTaGGGCAATGTAGACTGGCTT +
Preference number: 3 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGSNPCC*GNVDWL
Trigger: AAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGA...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
3UTR-3UTR CAA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCTCCAACCCTTGCTGTTaGGGCAATGTAGACTGGCTT +
Preference number: 3 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNASNPCC*GNVDWL
Trigger: AAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGA...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCGGCAGTCGTTGGTGGTaGCCGAATCCACCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPGSRWW*PNPPLH
Trigger: GTGCAGGGGTGGATTCGGTCACCACCAACGACTGCC...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCTCTCGGGAGCCAGCATaGGGGCCCCTCGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGSREPA*GPLGVP
Trigger: TGGGACACCGAGGGGCCCCCATGCTGGCTCCCGAGA...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGAGCTGCTCTGTGGCCTaGGCACAGCCCGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWSCSVA*AQPGWE
Trigger: TTCCCACCCGGGCTGTGCCCAGGCCACAGAGCAGCT...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAGGGACTCGGCCATGGTaGAGGCCTTTGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKGTRPW*RPLLSG
Trigger: GCCGCTGAGCAAAGGCCTTCACCATGGCCGAGTCCC...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR TCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCCTCTCAGCCTCTTTCTaGTCAGGGCCTGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPLSASF*SGPASG
Trigger: ACCGCTGGCAGGCCCTGATCAGAAAGAGGCTGAGAG...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGGGCAGTCGTTGGTGGTaGCCGAATCCACCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKGSRWW*PNPPLH
Trigger: GTGCAGGGGTGGATTCGGTCACCACCAACGACTGCC...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGGGCAGTCGTTGGTGGTaGCCGAATCCACCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWGSRWW*PNPPLH
Trigger: GTGCAGGGGTGGATTCGGTCACCACCAACGACTGCC...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTTCTCGGGAGCCAGCATaGGGGCCCCTCGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLSREPA*GPLGVP
Trigger: TGGGACACCGAGGGGCCCCCATGCTGGCTCCCGAGA...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCGTAGACTGGCTTGGGTaGGGAAGCAGGGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPVDWLG*GSRAGH
Trigger: ATGCCCTGCCCTGCTTCCCCACCCAAGCCAGTCTAC...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGTGGGCACAGCCCGGGTaGGAAGATGGGAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKWAQPG*EDGREE
Trigger: TTCCTCCCTCCCATCTTCCCACCCGGGCTGTGCCCA...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTCCTGCAGCTGCTCTGTaGCCTGGGCACAGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLPAAAL*PGHSPG
Trigger: ACCCGGGCTGTGCCCAGGCCACAGAGCAGCTGCAGG...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTCCTGCAGCTGCTCTGTaGCCTGGGCACAGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLAPAAAL*PGHSPG
Trigger: ACCCGGGCTGTGCCCAGGCCACAGAGCAGCTGCAGG...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGGGGACTCGGCCATGGTaGAGGCCTTTGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGGTRPW*RPLLSG
Trigger: GCCGCTGAGCAAAGGCCTTCACCATGGCCGAGTCCC...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR CCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCAGCAGCAGCACCTTGTaGAGGCTGTGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPSSSTL*RLCRCR
Trigger: CCTGCATCTGCACAGCCTCCACAAGGTGCTGCTGCT...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCCCACCAGCCCAGGCTTaGGTGGTAAGTCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPPPAQA*VVSLWV
Trigger: AACCCAGAGACTTACCACCCAAGCCTGGGCTGGTGG...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCGTAGACTGGCTTGGGTaGGGAAGCAGGGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTVDWLG*GSRAGH
Trigger: ATGCCCTGCCCTGCTTCCCCACCCAAGCCAGTCTAC...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTGCTTCTTTACTCGCTaGCGGTCAGGGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWCFFTR*RSGGLG
Trigger: CCCCAAGCCCCCTGACCGCCAGCGAGTAAAGAAGCA...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGAGCTGCTCTGTGGCCTaGGCACAGCCCGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGSCSVA*AQPGWE
Trigger: TTCCCACCCGGGCTGTGCCCAGGCCACAGAGCAGCT...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCGCGGCTGCTCCAATATaGAGGAATGGGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGAAAPI*RNGAVA
Trigger: GGCCACAGCCCCATTCCTTCATATTGGAGCAGCCGC...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAACTCTCAGCCTCTTTCTaGTCAGGGCCTGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKLSASF*SGPASG
Trigger: ACCGCTGGCAGGCCCTGATCAGAAAGAGGCTGAGAG...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCGTTCTGTTGCCTCCCTaGCGTCCATATATCTGGCGC +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPVLLPP*RPYIWR
Trigger: GCGCCAGATATATGGACGTCAGGGAGGCAACAGAAC...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGTCAGGGGGCTTGGGGTaGGGAATTCCTTTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKSGGLG*GIPLCR
Trigger: CCTGCACAAAGGAATTCCTCACCCCAAGCCCCCTGA...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTCAGGGGGCTTGGGGTaGGGAATTCCTTTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWSGGLG*GIPLCR
Trigger: CCTGCACAAAGGAATTCCTCACCCCAAGCCCCCTGA...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCCTCGGTTCAGCCCTATaGGTCAAACAGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPLGSAL*VKQVAL
Trigger: CAGTGCCACCTGTTTGACTCATAGGGCTGAACCGAG...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTGGCGCATTCCAGGTaGCCGTCGTTGGACATTAGC +
Preference number: 4 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTLAHSR*PSLDIS
Trigger: GCTAATGTCCAACGACGGGCACCTGGAATGCGCCAG...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCCCTCTCCGAGTGGTCTaGCTCCTCCCTTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPPLRVV*LLPFSV
Trigger: GACTGAAAAAGGGAGGAGGCAGACCACTCGGAGAGG...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGCGGAAGAGGAATCTTTaGTCAGCGGCAGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWRKRNL*SAAAPL
Trigger: GAGCGGAGCTGCCGCTGAGCAAAGATTCCTCTTCCG...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538649.5
CDS-3UTR CCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGCCACCAGCCCAGGCTTaGGTGGTAAGTCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKPPAQA*VVSLWV
Trigger: AACCCAGAGACTTACCACCCAAGCCTGGGCTGGTGG...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGATCTGCTGCAGCAGCTaGCAGTCGTTGGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKICCSS*QSLVVT
Trigger: GGTCACCACCAACGACTGCCAGCTGCTGCAGCAGAT...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCATCTGCTGCAGCAGCTaGCAGTCGTTGGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPICCSS*QSLVVT
Trigger: GGTCACCACCAACGACTGCCAGCTGCTGCAGCAGAT...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGATCTGCTGCAGCAGCTaGCAGTCGTTGGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWICCSS*QSLVVT
Trigger: GGTCACCACCAACGACTGCCAGCTGCTGCAGCAGAT...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCTTGGGCAATGTAGACTaGCTTGGGTGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPLGNVD*LGWGSR
Trigger: CCTGCTTCCCCACCCAAGCCAGTCTACATTGCCCAA...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAGGAATGCCCATCACCTaGGCAGAGGGCCCTCATGGT +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKGMPIT*AEGPHG
Trigger: ACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCC...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGGGCGGTCAGGGGGCTTaGGGTGAGGAATTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKGGQGA*GEEFLC
Trigger: ACAAAGGAATTCCTCACCCCAAGCCCCCTGACCGCC...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCCTGCAGCTGCTCTGTaGCCTGGGCACAGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWPAAAL*PGHSPG
Trigger: ACCCGGGCTGTGCCCAGGCCACAGAGCAGCTGCAGG...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAACTACAGGAGGCTGTGTaGGTCCTCTCCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKLQEAV*VLSQGL
Trigger: CAGGCCTTGGGAGAGGACCCACACAGCCTCCTGTAG...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCCTACAGGAGGCTGTGTaGGTCCTCTCCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGLQEAV*VLSQGL
Trigger: CAGGCCTTGGGAGAGGACCCACACAGCCTCCTGTAG...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGGGCTGTGGCCTGCAGTaGCACACGCAAGCTATGCCA +
Preference number: 4 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGGCGLQ*HTQAMP
Trigger: TGGCATAGCTTGCGTGTGTCACTGCAGGCCACAGCC...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGGCTGTGGCCTGCAGTaGCACACGCAAGCTATGCCA +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLGCGLQ*HTQAMP
Trigger: TGGCATAGCTTGCGTGTGTCACTGCAGGCCACAGCC...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCAGTCTCTGGGTTCCATaGTGCAGGGTGAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPSLWVP*CRVRRC
Trigger: GCATCTCCTCACCCTGCATCATGGAACCCAGAGACT...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGGTGCTCATCATGCATaGGGAAGGGGACCCCATCGG +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLGAHHA*GRGPHR
Trigger: CCGATGGGGTCCCCTTCCTCATGCATGATGAGCACC...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGGTTCTGTTGCCTCCCTaGCGTCCATATATCTGGCGC +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKVLLPP*RPYIWR
Trigger: GCGCCAGATATATGGACGTCAGGGAGGCAACAGAAC...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGGCAACCCACCACCCCTaGAGCATTCCACTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKATHHP*SIPLKP
Trigger: TGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGC...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTGGAGGCTGTGCAGATaGAGGGGCTGTCTACAAAGC +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWWRLCR*RGCLQS
Trigger: GCTTTGTAGACAGCCCCTGCATCTGCACAGCCTCCA...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCACCTTGTGGAGGCTGTaGAGATGCAGGGGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPTLWRL*RCRGCL
Trigger: TAGACAGCCCCTGCATCTGCACAGCCTCCACAAGGT...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCTATGCCACTCCTGCTaGCATTGGATGTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPLCHSC*HWMSSP
Trigger: GGGACTGGACATCCAATGGCAGCAGGAGTGGCATAG...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTATGCCACTCCTGCTaGCATTGGATGTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTLCHSC*HWMSSP
Trigger: GGGACTGGACATCCAATGGCAGCAGGAGTGGCATAG...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCAATGGGGCTGTGGCCTaGAGTGACACACGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTNGAVA*SDTRKL
Trigger: TAGCTTGCGTGTGTCACTGCAGGCCACAGCCCCATT...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCTTTGCATCCTCTCTCTaGGGCATTTCCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPFASSL*GISSSG
Trigger: GCCACTGGAGGAAATGCCCCAGAGAGAGGATGCAAA...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR CCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAGAAGGAATGGGGCTGTaGCCTGCAGTGACACACGCA +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKEGMGL*PAVTHA
Trigger: TGCGTGTGTCACTGCAGGCCACAGCCCCATTCCTTC...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCGAAGGAATGGGGCTGTaGCCTGCAGTGACACACGCA +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGEGMGL*PAVTHA
Trigger: TGCGTGTGTCACTGCAGGCCACAGCCCCATTCCTTC...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAACCACCAGCCCAGGCTTaGGTGGTAAGTCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKPPAQA*VVSLWV
Trigger: AACCCAGAGACTTACCACCCAAGCCTGGGCTGGTGG...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGGTATGTGTGGTTCTGTaGGGGTCGGCGCAAGTCGAA +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWVCVVL*GSAQVE
Trigger: TTCGACTTGCGCCGACCCCCACAGAACCACACATAC...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGCCAGGTGCCCGTCGTTaGACATTAGCCCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKPGARR*TLARSS
Trigger: TGAAGATCGGGCTAATGTCCAACGACGGGCACCTGG...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGGGCAGAGGGCCCTCATaGTTCAAAACCTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKGRGPS*FKTSCW
Trigger: CCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCC...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGGAATGCCCATCACCTaGGCAGAGGGCCCTCATGGT +
Preference number: 4 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLAGMPIT*AEGPHG
Trigger: ACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCC...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGCAGCTCCTCTCCGAGTaGTCTGCCTCCTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKQLLSE*SASSLF
Trigger: AAAAAGGGAGGAGGCAGACCACTCGGAGAGGAGCTG...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGAGTTGTGCAGGTCATTaGGAAGGACGAGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWSCAGH*EGRARC
Trigger: ACATCGGGCTCGTCCTTCTCAATGACCTGCACAACT...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS-3UTR TCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAAGTCTCTGGGTTCCATaGTGCAGGGTGAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKSLWVP*CRVRRC
Trigger: GCATCTCCTCACCCTGCATCATGGAACCCAGAGACT...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGTCTCTGGGTTCCATaGTGCAGGGTGAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGSLWVP*CRVRRC
Trigger: GCATCTCCTCACCCTGCATCATGGAACCCAGAGACT...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCCACTGCTGTGGGCTGTaGTTCGGGTTGGGAATACAG +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGHCCGL*FGLGIQ
Trigger: CTGTATTCCCAACCCGAATCACAGCCCACAGCAGTG...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAGCAACCCACCACCCCTaGAGCATTCCACTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKATHHP*SIPLKP
Trigger: TGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGC...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTTCAGGGGGCTTGGGGTaGGGAATTCCTTTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLASGGLG*GIPLCR
Trigger: CCTGCACAAAGGAATTCCTCACCCCAAGCCCCCTGA...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCACCTTGTGGAGGCTGTaGAGATGCAGGGGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGTLWRL*RCRGCL
Trigger: TAGACAGCCCCTGCATCTGCACAGCCTCCACAAGGT...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCGACACACGCAAGCTATaGCACTCCTGCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGDTRKL*HSCCHW
Trigger: CCAATGGCAGCAGGAGTGGCATAGCTTGCGTGTGTC...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAGACACACGCAAGCTATaGCACTCCTGCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKDTRKL*HSCCHW
Trigger: CCAATGGCAGCAGGAGTGGCATAGCTTGCGTGTGTC...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCGTGGTCCTGCTGAGGTaGTCATCATGCATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTVVLLR*SSCMRK
Trigger: CTTCCTCATGCATGATGAGCACCTCAGCAGGACCAC...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCGGCTTGGGGCACCCTTaGATTCAGCACAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGGLGHP*IQHSLQ
Trigger: TTGGAGACTGTGCTGAATGCAAGGGTGCCCCAAGCC...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCGCCTCTCCGTTCTGTTaGCTCCCTGACGTCCATATA +
Preference number: 4 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTASPFC*LPDVHI
Trigger: TATATGGACGTCAGGGAGGCAACAGAACGGAGAGGC...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGGAGGGAGAGCAAATCTaGTTCTTTACTCGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWEGEQI*FFTRWR
Trigger: CCGCCAGCGAGTAAAGAAGCAGATTTGCTCTCCCTC...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCGAGGGAGAGCAAATCTaGTTCTTTACTCGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPEGEQI*FFTRWR
Trigger: CCGCCAGCGAGTAAAGAAGCAGATTTGCTCTCCCTC...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCCCTCTCCGAGTGGTCTaGCTCCTCCCTTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGPLRVV*LLPFSV
Trigger: GACTGAAAAAGGGAGGAGGCAGACCACTCGGAGAGG...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCTACAGTCGCACTTGCTaGTTTGCATCCTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPYSRTC*FASSLW
Trigger: CCAGAGAGAGGATGCAAACCAGCAAGTGCGACTGTA...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR CCA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGAGCAGCAGCACCTTGTaGAGGCTGTGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGSSSTL*RLCRCR
Trigger: CCTGCATCTGCACAGCCTCCACAAGGTGCTGCTGCT...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCGCAGTAGCAGAATCTTaGGACCTCTTCGGTGGATAC +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPAVAES*DLFGGY
Trigger: GTATCCACCGAAGAGGTCCCAAGATTCTGCTACTGC...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCGAGAAGTCACTGCTGTaGGCTGTGATTCGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGEKSLL*AVIRVG
Trigger: CCCAACCCGAATCACAGCCCACAGCAGTGACTTCTC...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCAAAAGACCATGGCTTaGGGCACCCTTGCATTCAGC +
Preference number: 4 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTQKTMA*GTLAFS
Trigger: GCTGAATGCAAGGGTGCCCCAAGCCATGGTCTTTTG...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGCAAAAGACCATGGCTTaGGGCACCCTTGCATTCAGC +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKQKTMA*GTLAFS
Trigger: GCTGAATGCAAGGGTGCCCCAAGCCATGGTCTTTTG...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCGTAGCCAAAAGACCATaGCTTGGGGCACCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPVAKRP*LGAPLH
Trigger: ATGCAAGGGTGCCCCAAGCCATGGTCTTTTGGCTAC...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCCCAGGTGCCCGTCGTTaGACATTAGCCCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGPGARR*TLARSS
Trigger: TGAAGATCGGGCTAATGTCCAACGACGGGCACCTGG...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCGGGAGGTTAAGAAACTaGGGCCTCTCCGTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPGRLRN*GLSVLL
Trigger: CAACAGAACGGAGAGGCCCCAGTTTCTTAACCTCCC...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGGGGAGGTTAAGAAACTaGGGCCTCTCCGTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWGRLRN*GLSVLL
Trigger: CAACAGAACGGAGAGGCCCCAGTTTCTTAACCTCCC...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCGGCAGAGGGCCCTCATaGTTCAAAACCTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGGRGPS*FKTSCW
Trigger: CCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCC...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGGCGGTCAGGGGGCTTaGGGTGAGGAATTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLGGQGA*GEEFLC
Trigger: ACAAAGGAATTCCTCACCCCAAGCCCCCTGACCGCC...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGGCGGTCAGGGGGCTTaGGGTGAGGAATTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLAGGQGA*GEEFLC
Trigger: ACAAAGGAATTCCTCACCCCAAGCCCCCTGACCGCC...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAAGTTGTGCAGGTCATTaGGAAGGACGAGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKSCAGH*EGRARC
Trigger: ACATCGGGCTCGTCCTTCTCAATGACCTGCACAACT...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS-3UTR TCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGGGCTGTGGCCTGCAGTaGCACACGCAAGCTATGCCA +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWGCGLQ*HTQAMP
Trigger: TGGCATAGCTTGCGTGTGTCACTGCAGGCCACAGCC...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCGCGGCTGCTCCAATATaGAGGAATGGGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNAAAAPI*RNGAVA
Trigger: GGCCACAGCCCCATTCCTTCATATTGGAGCAGCCGC...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTCACTGCTGTGGGCTGTaGTTCGGGTTGGGAATACAG +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLHCCGL*FGLGIQ
Trigger: CTGTATTCCCAACCCGAATCACAGCCCACAGCAGTG...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGACCAGGATCCAGCATTaGGTCTCTTCAGTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKTRIQH*VSSVQS
Trigger: GGACTGAACTGAAGAGACTCAATGCTGGATCCTGGT...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGGCAACCCACCACCCCTaGAGCATTCCACTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGATHHP*SIPLKP
Trigger: TGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGC...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTCTATGCCACTCCTGCTaGCATTGGATGTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLLCHSC*HWMSSP
Trigger: GGGACTGGACATCCAATGGCAGCAGGAGTGGCATAG...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTAATGGGGCTGTGGCCTaGAGTGACACACGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLNGAVA*SDTRKL
Trigger: TAGCTTGCGTGTGTCACTGCAGGCCACAGCCCCATT...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGGGCAATTCCAGCGGCTaGTCCAATATGAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKGNSSG*SNMKEW
Trigger: CCATTCCTTCATATTGGAGCAGCCGCTGGAATTGCC...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGGGCTTGGGGCACCCTTaGATTCAGCACAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGGLGHP*IQHSLQ
Trigger: TTGGAGACTGTGCTGAATGCAAGGGTGCCCCAAGCC...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCGCCTCTCCGTTCTGTTaGCTCCCTGACGTCCATATA +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGASPFC*LPDVHI
Trigger: TATATGGACGTCAGGGAGGCAACAGAACGGAGAGGC...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGCCACTCTCCAACCCTTaGTGTTTGGGCAATGTAGAC +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWPLSNP*CLGNVD
Trigger: GTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGG...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCCACTCTCCAACCCTTaGTGTTTGGGCAATGTAGAC +
Preference number: 4 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTPLSNP*CLGNVD
Trigger: GTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGG...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTCCTCTCCGAGTGGTCTaGCTCCTCCCTTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLAPLRVV*LLPFSV
Trigger: GACTGAAAAAGGGAGGAGGCAGACCACTCGGAGAGG...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGGGCATTTCCTCCAGTaGCAGCTATACAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLGHFLQ*QLYRQW
Trigger: CCACTGCCTGTATAGCTGCCACTGGAGGAAATGCCC...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR CCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCTTTGCATCCTCTCTCTaGGGCATTTCCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGFASSL*GISSSG
Trigger: GCCACTGGAGGAAATGCCCCAGAGAGAGGATGCAAA...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR CCA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCGCAGTAGCAGAATCTTaGGACCTCTTCGGTGGATAC +
Preference number: 4 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPAVAES*DLFGGY
Trigger: GTATCCACCGAAGAGGTCCCAAGATTCTGCTACTGC...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGTATGTGTGGTTCTGTaGGGGTCGGCGCAAGTCGAA +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLVCVVL*GSAQVE
Trigger: TTCGACTTGCGCCGACCCCCACAGAACCACACATAC...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTCCAGGTGCCCGTCGTTaGACATTAGCCCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLPGARR*TLARSS
Trigger: TGAAGATCGGGCTAATGTCCAACGACGGGCACCTGG...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTCCAGGTGCCCGTCGTTaGACATTAGCCCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLAPGARR*TLARSS
Trigger: TGAAGATCGGGCTAATGTCCAACGACGGGCACCTGG...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGGTAGACTGGCTTGGGTaGGGAAGCAGGGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWVDWLG*GSRAGH
Trigger: ATGCCCTGCCCTGCTTCCCCACCCAAGCCAGTCTAC...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGGGAATGCCCATCACCTaGGCAGAGGGCCCTCATGGT +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWGMPIT*AEGPHG
Trigger: ACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCC...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGTGCTTCTTTACTCGCTaGCGGTCAGGGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWCFFTR*RSGGLG
Trigger: CCCCAAGCCCCCTGACCGCCAGCGAGTAAAGAAGCA...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCTATGAGTCAAACAGGTaGCACTGTTGCCACCTACAG +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPYESNR*HCCHLQ
Trigger: CTGTAGGTGGCAACAGTGCCACCTGTTTGACTCATA...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTCAGCTCCTCTCCGAGTaGTCTGCCTCCTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLQLLSE*SASSLF
Trigger: AAAAAGGGAGGAGGCAGACCACTCGGAGAGGAGCTG...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGAGTTGTGCAGGTCATTaGGAAGGACGAGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGSCAGH*EGRARC
Trigger: ACATCGGGCTCGTCCTTCTCAATGACCTGCACAACT...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS-3UTR TCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCAGGATCCAGCATTaGGTCTCTTCAGTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKTRIQH*VSSVQS
Trigger: GGACTGAACTGAAGAGACTCAATGCTGGATCCTGGT...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCACCAGGATCCAGCATTaGGTCTCTTCAGTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGTRIQH*VSSVQS
Trigger: GGACTGAACTGAAGAGACTCAATGCTGGATCCTGGT...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAAAGCTATGCCACTCCTaGTGCCATTGGATGTCCAGT +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKKLCHS*CHWMSS
Trigger: ACTGGACATCCAATGGCAGCAGGAGTGGCATAGCTT...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAAGCTATGCCACTCCTaGTGCCATTGGATGTCCAGT +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGKLCHS*CHWMSS
Trigger: ACTGGACATCCAATGGCAGCAGGAGTGGCATAGCTT...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTGGCGCATTCCAGGTaGCCGTCGTTGGACATTAGC +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWLAHSR*PSLDIS
Trigger: GCTAATGTCCAACGACGGGCACCTGGAATGCGCCAG...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGGAAGGAATGGGGCTGTaGCCTGCAGTGACACACGCA +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWEGMGL*PAVTHA
Trigger: TGCGTGTGTCACTGCAGGCCACAGCCCCATTCCTTC...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGGGCTGTGATTCGGGTTaGGAATACAGAGGCTACATT +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKGCDSG*EYRGYI
Trigger: AATGTAGCCTCTGTATTCCCAACCCGAATCACAGCC...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGTAGCCAAAAGACCATaGCTTGGGGCACCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLVAKRP*LGAPLH
Trigger: ATGCAAGGGTGCCCCAAGCCATGGTCTTTTGGCTAC...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGGGAGGTTAAGAAACTaGGGCCTCTCCGTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLGRLRN*GLSVLL
Trigger: CAACAGAACGGAGAGGCCCCAGTTTCTTAACCTCCC...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCAGTCTCTGGGTTCCATaGTGCAGGGTGAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNASLWVP*CRVRRC
Trigger: GCATCTCCTCACCCTGCATCATGGAACCCAGAGACT...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCACTGCTGTGGGCTGTaGTTCGGGTTGGGAATACAG +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWHCCGL*FGLGIQ
Trigger: CTGTATTCCCAACCCGAATCACAGCCCACAGCAGTG...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTACCAGGATCCAGCATTaGGTCTCTTCAGTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLATRIQH*VSSVQS
Trigger: GGACTGAACTGAAGAGACTCAATGCTGGATCCTGGT...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCTTGAGGCCAGTAGTTTaGGACCAGCCTGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNALRPVV*DQPGQV
Trigger: TACCTGCCCAGGCTGGTCTCAAACTACTGGCCTCAA...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453994.6
CDS-3UTR GCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAAGATACAGTCGCACTTaGTGGTTTGCATCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKRYSRT*WFASSL
Trigger: GAGAGAGGATGCAAACCAGCAAGTGCGACTGTATCT...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR GCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCTATGCCACTCCTGCTaGCATTGGATGTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNALCHSC*HWMSSP
Trigger: GGGACTGGACATCCAATGGCAGCAGGAGTGGCATAG...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGAAGCTATGCCACTCCTaGTGCCATTGGATGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGKLCHS*CHWMSS
Trigger: ACTGGACATCCAATGGCAGCAGGAGTGGCATAGCTT...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCGACACACGCAAGCTATaGCACTCCTGCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNADTRKL*HSCCHW
Trigger: CCAATGGCAGCAGGAGTGGCATAGCTTGCGTGTGTC...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGAATGGGGCTGTGGCCTaGAGTGACACACGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWNGAVA*SDTRKL
Trigger: TAGCTTGCGTGTGTCACTGCAGGCCACAGCCCCATT...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGGCAATTCCAGCGGCTaGTCCAATATGAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLGNSSG*SNMKEW
Trigger: CCATTCCTTCATATTGGAGCAGCCGCTGGAATTGCC...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTCCACTCTCCAACCCTTaGTGTTTGGGCAATGTAGAC +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLPLSNP*CLGNVD
Trigger: GTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGG...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTTACAGTCGCACTTGCTaGTTTGCATCCTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLAYSRTC*FASSLW
Trigger: CCAGAGAGAGGATGCAAACCAGCAAGTGCGACTGTA...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR CCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCAGTAGCAGAATCTTaGGACCTCTTCGGTGGATAC +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLAVAES*DLFGGY
Trigger: GTATCCACCGAAGAGGTCCCAAGATTCTGCTACTGC...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAGGCTGTGATTCGGGTTaGGAATACAGAGGCTACATT +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKGCDSG*EYRGYI
Trigger: AATGTAGCCTCTGTATTCCCAACCCGAATCACAGCC...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCGAGAAGTCACTGCTGTaGGCTGTGATTCGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNAEKSLL*AVIRVG
Trigger: CCCAACCCGAATCACAGCCCACAGCAGTGACTTCTC...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGGAGAAGTCACTGCTGTaGGCTGTGATTCGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWEKSLL*AVIRVG
Trigger: CCCAACCCGAATCACAGCCCACAGCAGTGACTTCTC...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCTTGGGCAATGTAGACTaGCTTGGGTGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNALGNVD*LGWGSR
Trigger: CCTGCTTCCCCACCCAAGCCAGTCTACATTGCCCAA...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCAGCTCCTCTCCGAGTaGTCTGCCTCCTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNAQLLSE*SASSLF
Trigger: AAAAAGGGAGGAGGCAGACCACTCGGAGAGGAGCTG...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCCTTATGCAATGCCTTaGTATCCAATAGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTPYAMP*YPIVAD
Trigger: ATCTGCCACTATTGGATATCAAGGCATTGCATAAGG...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGCCTTATGCAATGCCTTaGTATCCAATAGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKPYAMP*YPIVAD
Trigger: ATCTGCCACTATTGGATATCAAGGCATTGCATAAGG...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCGTAGGAACCTGTCTTTaGTATCCAATAGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTVGTCL*YPIVAD
Trigger: ATCTGCCACTATTGGATATCAAAGACAGGTTCCTAC...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453994.6
CDS-3UTR GCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTAGATACAGTCGCACTTaGTGGTTTGCATCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLRYSRT*WFASSL
Trigger: GAGAGAGGATGCAAACCAGCAAGTGCGACTGTATCT...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR GCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCGTGGTCCTGCTGAGGTaGTCATCATGCATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNAVVLLR*SSCMRK
Trigger: CTTCCTCATGCATGATGAGCACCTCAGCAGGACCAC...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGGTGGTCCTGCTGAGGTaGTCATCATGCATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWVVLLR*SSCMRK
Trigger: CTTCCTCATGCATGATGAGCACCTCAGCAGGACCAC...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCGCCTCTCCGTTCTGTTaGCTCCCTGACGTCCATATA +
Preference number: 4 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNAASPFC*LPDVHI
Trigger: TATATGGACGTCAGGGAGGCAACAGAACGGAGAGGC...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGGCCTCTCCGTTCTGTTaGCTCCCTGACGTCCATATA +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWASPFC*LPDVHI
Trigger: TATATGGACGTCAGGGAGGCAACAGAACGGAGAGGC...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAATCTCGGGAGCCAGCATaGGGGCCCCTCGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKSREPA*GPLGVP
Trigger: TGGGACACCGAGGGGCCCCCATGCTGGCTCCCGAGA...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGGCTGTGATTCGGGTTaGGAATACAGAGGCTACATT +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLGCDSG*EYRGYI
Trigger: AATGTAGCCTCTGTATTCCCAACCCGAATCACAGCC...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACAGCTGCTCTGTGGCCTaGGCACAGCCCGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNSCSVA*AQPGWE
Trigger: TTCCCACCCGGGCTGTGCCCAGGCCACAGAGCAGCT...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTTATGAGTCAAACAGGTaGCACTGTTGCCACCTACAG +
Preference number: 4 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLAYESNR*HCCHLQ
Trigger: CTGTAGGTGGCAACAGTGCCACCTGTTTGACTCATA...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACGGCAGTCGTTGGTGGTaGCCGAATCCACCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNGSRWW*PNPPLH
Trigger: GTGCAGGGGTGGATTCGGTCACCACCAACGACTGCC...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCAAGCTATGCCACTCCTaGTGCCATTGGATGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNAKLCHS*CHWMSS
Trigger: ACTGGACATCCAATGGCAGCAGGAGTGGCATAGCTT...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGGGCAATTCCAGCGGCTaGTCCAATATGAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWGNSSG*SNMKEW
Trigger: CCATTCCTTCATATTGGAGCAGCCGCTGGAATTGCC...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACTGGGCACAGCCCGGGTaGGAAGATGGGAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNWAQPG*EDGREE
Trigger: TTCCTCCCTCCCATCTTCCCACCCGGGCTGTGCCCA...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACGCGGCTGCTCCAATATaGAGGAATGGGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNAAAPI*RNGAVA
Trigger: GGCCACAGCCCCATTCCTTCATATTGGAGCAGCCGC...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACGGTGCTCATCATGCATaGGGAAGGGGACCCCATCGG +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNGAHHA*GRGPHR
Trigger: CCGATGGGGTCCCCTTCCTCATGCATGATGAGCACC...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTCCTTATGCAATGCCTTaGTATCCAATAGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLPYAMP*YPIVAD
Trigger: ATCTGCCACTATTGGATATCAAGGCATTGCATAAGG...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAATTCATTGAAGTTGTaGAGGTCATTGAGAAGGACG +
Preference number: 4 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGNSLKL*RSLRRT
Trigger: CGTCCTTCTCAATGACCTGCACAACTTCAATGAATT...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS-3UTR GCA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCGAGACATTATCCTTATaGAATGCCTTGATATCCAAT +
Preference number: 4 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPETLSL*NALISN
Trigger: ATTGGATATCAAGGCATTGCATAAGGATAATGTCTC...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTAACAAATCTTCTTTaGAGGAGGAAGGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWLTNLL*RRKVHK
Trigger: TTTGTGGACCTTCCTCCTCCAAAGAAGATTTGTTAA...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCTTAACAAATCTTCTTTaGAGGAGGAAGGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPLTNLL*RRKVHK
Trigger: TTTGTGGACCTTCCTCCTCCAAAGAAGATTTGTTAA...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACGTAGACTGGCTTGGGTaGGGAAGCAGGGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNVDWLG*GSRAGH
Trigger: ATGCCCTGCCCTGCTTCCCCACCCAAGCCAGTCTAC...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACTGCTTCTTTACTCGCTaGCGGTCAGGGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNCFFTR*RSGGLG
Trigger: CCCCAAGCCCCCTGACCGCCAGCGAGTAAAGAAGCA...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACCTACAGGAGGCTGTGTaGGTCCTCTCCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNLQEAV*VLSQGL
Trigger: CAGGCCTTGGGAGAGGACCCACACAGCCTCCTGTAG...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAAGGCTGTGGCCTGCAGTaGCACACGCAAGCTATGCCA +
Preference number: 4 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKGCGLQ*HTQAMP
Trigger: TGGCATAGCTTGCGTGTGTCACTGCAGGCCACAGCC...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAAGGTGCTCATCATGCATaGGGAAGGGGACCCCATCGG +
Preference number: 4 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKGAHHA*GRGPHR
Trigger: CCGATGGGGTCCCCTTCCTCATGCATGATGAGCACC...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACTCTCAGCCTCTTTCTaGTCAGGGCCTGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKLSASF*SGPASG
Trigger: ACCGCTGGCAGGCCCTGATCAGAAAGAGGCTGAGAG...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTAATTCATTGAAGTTGTaGAGGTCATTGAGAAGGACG +
Preference number: 4 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLANSLKL*RSLRRT
Trigger: CGTCCTTCTCAATGACCTGCACAACTTCAATGAATT...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS-3UTR GCA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCGAGACATTATCCTTATaGAATGCCTTGATATCCAAT +
Preference number: 4 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPETLSL*NALISN
Trigger: ATTGGATATCAAGGCATTGCATAAGGATAATGTCTC...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGAGCAGCAGCACCTTGTaGAGGCTGTGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRSSSTL*RLCRCR
Trigger: CCTGCATCTGCACAGCCTCCACAAGGTGCTGCTGCT...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAATTAACAAATCTTCTTTaGAGGAGGAAGGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKLTNLL*RRKVHK
Trigger: TTTGTGGACCTTCCTCCTCCAAAGAAGATTTGTTAA...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACGTTCTGTTGCCTCCCTaGCGTCCATATATCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNVLLPP*RPYIWR
Trigger: GCGCCAGATATATGGACGTCAGGGAGGCAACAGAAC...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGACCTTGTGGAGGCTGTaGAGATGCAGGGGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRTLWRL*RCRGCL
Trigger: TAGACAGCCCCTGCATCTGCACAGCCTCCACAAGGT...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACACCTTGTGGAGGCTGTaGAGATGCAGGGGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNTLWRL*RCRGCL
Trigger: TAGACAGCCCCTGCATCTGCACAGCCTCCACAAGGT...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACAATGGGGCTGTGGCCTaGAGTGACACACGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNNGAVA*SDTRKL
Trigger: TAGCTTGCGTGTGTCACTGCAGGCCACAGCCCCATT...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGGGCTTGGGGCACCCTTaGATTCAGCACAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRGLGHP*IQHSLQ
Trigger: TTGGAGACTGTGCTGAATGCAAGGGTGCCCCAAGCC...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACGAGAAGTCACTGCTGTaGGCTGTGATTCGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNEKSLL*AVIRVG
Trigger: CCCAACCCGAATCACAGCCCACAGCAGTGACTTCTC...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAAATCTGCTGCAGCAGCTaGCAGTCGTTGGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKICCSS*QSLVVT
Trigger: GGTCACCACCAACGACTGCCAGCTGCTGCAGCAGAT...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACACTGCTGTGGGCTGTaGTTCGGGTTGGGAATACAG +
Preference number: 4 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKHCCGL*FGLGIQ
Trigger: CTGTATTCCCAACCCGAATCACAGCCCACAGCAGTG...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAAGTTCTGTTGCCTCCCTaGCGTCCATATATCTGGCGC +
Preference number: 4 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKVLLPP*RPYIWR
Trigger: GCGCCAGATATATGGACGTCAGGGAGGCAACAGAAC...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAAGCAACCCACCACCCCTaGAGCATTCCACTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKATHHP*SIPLKP
Trigger: TGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGC...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR TCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACTCGGTTCAGCCCTATaGGTCAAACAGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKLGSAL*VKQVAL
Trigger: CAGTGCCACCTGTTTGACTCATAGGGCTGAACCGAG...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAAGACACACGCAAGCTATaGCACTCCTGCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKDTRKL*HSCCHW
Trigger: CCAATGGCAGCAGGAGTGGCATAGCTTGCGTGTGTC...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACGTGGTCCTGCTGAGGTaGTCATCATGCATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNVVLLR*SSCMRK
Trigger: CTTCCTCATGCATGATGAGCACCTCAGCAGGACCAC...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACGAGGGAGAGCAAATCTaGTTCTTTACTCGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNEGEQI*FFTRWR
Trigger: CCGCCAGCGAGTAAAGAAGCAGATTTGCTCTCCCTC...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGCAAAAGACCATGGCTTaGGGCACCCTTGCATTCAGC +
Preference number: 4 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRQKTMA*GTLAFS
Trigger: GCTGAATGCAAGGGTGCCCCAAGCCATGGTCTTTTG...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGGGGAGGTTAAGAAACTaGGGCCTCTCCGTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRGRLRN*GLSVLL
Trigger: CAACAGAACGGAGAGGCCCCAGTTTCTTAACCTCCC...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGGGCAATTCCAGCGGCTaGTCCAATATGAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRGNSSG*SNMKEW
Trigger: CCATTCCTTCATATTGGAGCAGCCGCTGGAATTGCC...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGGCAGTAGCAGAATCTTaGGACCTCTTCGGTGGATAC +
Preference number: 4 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRAVAES*DLFGGY
Trigger: GTATCCACCGAAGAGGTCCCAAGATTCTGCTACTGC...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR GCA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCGAGACATTATCCTTATaGAATGCCTTGATATCCAAT +
Preference number: 4 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNAETLSL*NALISN
Trigger: ATTGGATATCAAGGCATTGCATAAGGATAATGTCTC...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAAGGCTGTGATTCGGGTTaGGAATACAGAGGCTACATT +
Preference number: 4 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKGCDSG*EYRGYI
Trigger: AATGTAGCCTCTGTATTCCCAACCCGAATCACAGCC...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CCA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAATATGAGTCAAACAGGTaGCACTGTTGCCACCTACAG +
Preference number: 4 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKYESNR*HCCHLQ
Trigger: CTGTAGGTGGCAACAGTGCCACCTGTTTGACTCATA...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS TCA 90 bp GGCAGCGGGCCCAGACGGAGCAGCAGCCGGGGGACTCGGCCATGGTaGAGGCCTTTGCTCAGCGGCAGCTCCGCTCCGCTCTCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: GSGPRRSSSRGTRPW*RPLLSGSSAPLSSL
Trigger: CAGAGAGGAGAGCGGAGCGGAGCTGCCGCTGAGCAAAGGCCTTCACCATGGCCGAGTCCCCCGGCTGCTGCTCCGTCTGGGCCCGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS GCA 90 bp CCAGACGGAGCAGCAGCCGGGGGACTCGGCCATGGTGAAGGCCTTTaGTCAGCGGCAGCTCCGCTCCGCTCTCCTCTCTGCACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: PDGAAAGGLGHGEGL*SAAAPLRSPLCTAS
Trigger: GGAAGCAGTGCAGAGAGGAGAGCGGAGCGGAGCTGCCGCTGAGCAAAGGCCTTCACCATGGCCGAGTCCCCCGGCTGCTGCTCCGTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS CCA 90 bp ATCCTCTCTCTGGGGCATTTCCTCCAGTGGCAGCTATACAGGCAGTaGAGGCAGCGGGCCCAGACGGAGCAGCAGCCGGGGGACTCGGCC +
Preference number: 5 (lower is better)
Translates to: ILSLGHFLQWQLYRQ*RQRAQTEQQPGDSA
Trigger: GGCCGAGTCCCCCGGCTGCTGCTCCGTCTGGGCCCGCTGCCTCCACTGCCTGTATAGCTGCCACTGGAGGAAATGCCCCAGAGAGAGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS GCA 90 bp ACTGTTGCCACCTACAGGAGGCTGTGTGGGTCCTCTCCCAAGGCCTaGAGCTGCTCTGTGGCCTGGGCACAGCCCGGGTGGGAAGATGGG +
Preference number: 5 (lower is better)
Translates to: TVATYRRLCGSSPKA*SCSVAWAQPGWEDG
Trigger: CCCATCTTCCCACCCGGGCTGTGCCCAGGCCACAGAGCAGCTGCAGGCCTTGGGAGAGGACCCACACAGCCTCCTGTAGGTGGCAACAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS GCA 90 bp AATGGGGCTGTGGCCTGCAGTGACACACGCAAGCTATGCCACTCCTaGTGCCATTGGATGTCCAGTCCCACAAGGCCAGCCGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: NGAVACSDTRKLCHS*CHWMSSPTRPAATS
Trigger: GCTTGTGGCGGCTGGCCTTGTGGGACTGGACATCCAATGGCAGCAGGAGTGGCATAGCTTGCGTGTGTCACTGCAGGCCACAGCCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS GCA 90 bp GAGGAAGGTGAGGAAGAGCAGGCCAAACCAGATACAGTCGCACTTTaGTCAGCGGCAGCTCCGCTCCGCTCTCCTCTCTGCACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: EEGEEEQAKPDTVAL*SAAAPLRSPLCTAS
Trigger: GGAAGCAGTGCAGAGAGGAGAGCGGAGCGGAGCTGCCGCTGAGCAAAGTGCGACTGTATCTGGTTTGGCCTGCTCTTCCTCACCTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536730.5
CDS CCA 90 bp TATGAGTCAAACAGGTGGCACTGTTGCCACCTACAGGAGGCTGTGTaGGTCCTCTCCCAAGGCCTGCAGCTGCTCTGTGGCCTGGGCACA +
Preference number: 5 (lower is better)
Translates to: YESNRWHCCHLQEAV*VLSQGLQLLCGLGT
Trigger: TGTGCCCAGGCCACAGAGCAGCTGCAGGCCTTGGGAGAGGACCCACACAGCCTCCTGTAGGTGGCAACAGTGCCACCTGTTTGACTCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCCCACCAGCCCAGGCTaGGGTGGTAAGTCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTPTSPG*GGKSLG
Trigger: ACCCAGAGACTTACCACCCAAGCCTGGGCTGGTGGG...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCAGCAGCTGGCAGTCGTaGGTGGTGACCGAATCCACC +
Preference number: 5 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPSSWQS*VVTEST
Trigger: GGTGGATTCGGTCACCACCAACGACTGCCAGCTGCT...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS GCA 90 bp CAGAATCTTGGGACCTGCAGTGACACACGCAAGCTATGCCACTCCTaGTGCCATTGGATGTCCAGTCCCACAAGGCCAGCCGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: QNLGTCSDTRKLCHS*CHWMSSPTRPAATS
Trigger: GCTTGTGGCGGCTGGCCTTGTGGGACTGGACATCCAATGGCAGCAGGAGTGGCATAGCTTGCGTGTGTCACTGCAGGTCCCAAGATTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472623.1
CDS CCA 90 bp GAAGGCAGGGTGGGGAGAGGGGGTCCTGGCAACATCACCATGGCTTaGGGCACCCTTGCATTCAGCACAGTCTCCAATGTCTGGATCACA +
Preference number: 5 (lower is better)
Translates to: EGRVGRGGPGNITMA*GTLAFSTVSNVWIT
Trigger: TGTGATCCAGACATTGGAGACTGTGCTGAATGCAAGGGTGCCCCAAGCCATGGTGATGTTGCCAGGACCCCCTCTCCCCACCCTGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472623.1
CDS-3UTR CAA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCTGGCTTGGGGCACCCTaGCATTCAGCACAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPWLGAP*HSAQSP
Trigger: TGGAGACTGTGCTGAATGCAAGGGTGCCCCAAGCCA...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCTCCAGGTGCCCGTCGTaGGACATTAGCCCGATCTTC +
Preference number: 5 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPSRCPS*DISPIF
Trigger: GAAGATCGGGCTAATGTCCAACGACGGGCACCTGGA...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCAGCAGCTGGCAGTCGTaGGTGGTGACCGAATCCACC +
Preference number: 5 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPSSWQS*VVTEST
Trigger: GGTGGATTCGGTCACCACCAACGACTGCCAGCTGCT...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS GCA 90 bp TTTCAGTCCTCGGTTCAGCCCTATGAGTCAAACAGGTGGCACTGTTaGCACCTACAGGAGGCTGTGTGGGTCCTCTCCCAAGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: FQSSVQPYESNRWHC*HLQEAVWVLSQGLQ
Trigger: CTGCAGGCCTTGGGAGAGGACCCACACAGCCTCCTGTAGGTGGCAACAGTGCCACCTGTTTGACTCATAGGGCTGAACCGAGGACTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGGTCGCACTTGCTGGTTaGCATCCTCTCTCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKVALAG*HPLSGA
Trigger: TGCCCCAGAGAGAGGATGCAAACCAGCAAGTGCGAC...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR CAA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGGTCGCACTTGCTGGTTaGCATCCTCTCTCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWVALAG*HPLSGA
Trigger: TGCCCCAGAGAGAGGATGCAAACCAGCAAGTGCGAC...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR CAA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTGGCTTGGGGCACCCTaGCATTCAGCACAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWWLGAP*HSAQSP
Trigger: TGGAGACTGTGCTGAATGCAAGGGTGCCCCAAGCCA...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCTCCAGGTGCCCGTCGTaGGACATTAGCCCGATCTTC +
Preference number: 5 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPSRCPS*DISPIF
Trigger: GAAGATCGGGCTAATGTCCAACGACGGGCACCTGGA...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS TCA 90 bp GAGCAAATCTGCTTCTTTACTCGCTGGCGGTCAGGGGGCTTGGGGTaGGGAATTCCTTTGTGCAGGCTTTCCCATCCCTCTGTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: EQICFFTRWRSGGLG*GIPLCRLSHPSVPP
Trigger: AGGAGGGACAGAGGGATGGGAAAGCCTGCACAAAGGAATTCCTCACCCCAAGCCCCCTGACCGCCAGCGAGTAAAGAAGCAGATTTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS CCA 90 bp GGCCAAACCAGATACAGTCGCACTTGCTGGTTTGCATCCTCTCTCTaGGGCATTTCCTCCAGTGGCAGCTATACAGGCAGTGGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: GQTRYSRTCWFASSL*GISSSGSYTGSGGS
Trigger: GCTGCCTCCACTGCCTGTATAGCTGCCACTGGAGGAAATGCCCCAGAGAGAGGATGCAAACCAGCAAGTGCGACTGTATCTGGTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR CAA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTAGGAGCAGCAGCACCTaGTGGAGGCTGTGCAGATGC +
Preference number: 5 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLARSSST*WRLCRC
Trigger: GCATCTGCACAGCCTCCACAAGGTGCTGCTGCTCCT...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCCAAAAGACCATGGCTaGGGGCACCCTTGCATTCAG +
Preference number: 5 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPPKDHG*GHPCIQ
Trigger: CTGAATGCAAGGGTGCCCCAAGCCATGGTCTTTTGG...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTAGCAGCTGGCAGTCGTaGGTGGTGACCGAATCCACC +
Preference number: 5 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLSSWQS*VVTEST
Trigger: GGTGGATTCGGTCACCACCAACGACTGCCAGCTGCT...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCAAACAGGTGGCACTGTaGCCACCTACAGGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTKQVAL*PPTGGC
Trigger: ACAGCCTCCTGTAGGTGGCAACAGTGCCACCTGTTT...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS GCA 90 bp GGGAATACAGAGGCTACATTCGTGGTCCTGCTGAGGTGCTCATCATaGATGAGGAAGGGGACCCCATCGGAGCTGACCATCACATCAGTC +
Preference number: 5 (lower is better)
Translates to: GNTEATFVVLLRCSS*MRKGTPSELTITSV
Trigger: GACTGATGTGATGGTCAGCTCCGATGGGGTCCCCTTCCTCATGCATGATGAGCACCTCAGCAGGACCACGAATGTAGCCTCTGTATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS GCA 90 bp ATTCGGGTTGGGAATACAGAGGCTACATTCGTGGTCCTGCTGAGGTaGTCATCATGCATGAGGAAGGGGACCCCATCGGAGCTGACCATC +
Preference number: 5 (lower is better)
Translates to: IRVGNTEATFVVLLR*SSCMRKGTPSELTI
Trigger: GATGGTCAGCTCCGATGGGGTCCCCTTCCTCATGCATGATGAGCACCTCAGCAGGACCACGAATGTAGCCTCTGTATTCCCAACCCGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS CCA 90 bp TCCTCCCTTTTTCAGTCCTCGGTTCAGCCCTATGAGTCAAACAGGTaGCACTGTTGCCACCTACAGGAGGCTGTGTGGGTCCTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: SSLFQSSVQPYESNR*HCCHLQEAVWVLSQ
Trigger: TTGGGAGAGGACCCACACAGCCTCCTGTAGGTGGCAACAGTGCCACCTGTTTGACTCATAGGGCTGAACCGAGGACTGAAAAAGGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCAAGTTGTGCAGGTCATaGAGAAGGACGAGCCCGATG +
Preference number: 5 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTKLCRS*RRTSPM
Trigger: CATCGGGCTCGTCCTTCTCAATGACCTGCACAACTT...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS-3UTR CAA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCAGCAGTAGCAGAATCTaGGGACCTCTTCGGTGGATA +
Preference number: 5 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPSSSRI*GPLRWI
Trigger: TATCCACCGAAGAGGTCCCAAGATTCTGCTACTGCT...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCCCACCAGCCCAGGCTaGGGTGGTAAGTCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWPTSPG*GGKSLG
Trigger: ACCCAGAGACTTACCACCCAAGCCTGGGCTGGTGGG...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCAACATGATGGAAAGGTaGAGGGCTGCAGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPNMMER*RAAASS
Trigger: GGAGGAAGCTGCAGCCCTCAACCTTTCCATCATGTT...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGAACATGATGGAAAGGTaGAGGGCTGCAGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWNMMER*RAAASS
Trigger: GGAGGAAGCTGCAGCCCTCAACCTTTCCATCATGTT...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTTGGCTTGGGGCACCCTaGCATTCAGCACAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLAWLGAP*HSAQSP
Trigger: TGGAGACTGTGCTGAATGCAAGGGTGCCCCAAGCCA...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTTCCAGGTGCCCGTCGTaGGACATTAGCCCGATCTTC +
Preference number: 5 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLSRCPS*DISPIF
Trigger: GAAGATCGGGCTAATGTCCAACGACGGGCACCTGGA...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS CCA 90 bp CAGTTCAGTCCAGGAGAAGTCACTGCTGTGGGCTGTGATTCGGGTTaGGAATACAGAGGCTACATTCGTGGTCCTGCTGAGGTGCTCATC +
Preference number: 5 (lower is better)
Translates to: QFSPGEVTAVGCDSG*EYRGYIRGPAEVLI
Trigger: GATGAGCACCTCAGCAGGACCACGAATGTAGCCTCTGTATTCCCAACCCGAATCACAGCCCACAGCAGTGACTTCTCCTGGACTGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS CCA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTaGCTTGGGTGGGGAAGCAGGGCAGGGCATTCACTCCATCATGAA +
Preference number: 5 (lower is better)
Translates to: PLKPLSNPCCLGNVD*LGWGSRAGHSLHHE
Trigger: TTCATGATGGAGTGAATGCCCTGCCCTGCTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCAGGAGCAGCAGCACCTaGTGGAGGCTGTGCAGATGC +
Preference number: 5 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNARSSST*WRLCRC
Trigger: GCATCTGCACAGCCTCCACAAGGTGCTGCTGCTCCT...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAACATGATGGAAAGGTaGAGGGCTGCAGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGNMMER*RAAASS
Trigger: GGAGGAAGCTGCAGCCCTCAACCTTTCCATCATGTT...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGCCAAAAGACCATGGCTaGGGGCACCCTTGCATTCAG +
Preference number: 5 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGPKDHG*GHPCIQ
Trigger: CTGAATGCAAGGGTGCCCCAAGCCATGGTCTTTTGG...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp AGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTCCAACCCTTGCTGTTaGGGCAATGTAGACTGGCTT +
Preference number: 5 (lower is better)
Translates to: RFHSSLGNAHHLGRGPSWSNPCC*GNVDWL
Trigger: AAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGA...CCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGAAACAGGTGGCACTGTaGCCACCTACAGGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGKQVAL*PPTGGC
Trigger: ACAGCCTCCTGTAGGTGGCAACAGTGCCACCTGTTT...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGAGGGCCCTCATGGTTCAAAAGCAGTAGCAGAATCTaGGGACCTCTTCGGTGGATA +
Preference number: 5 (lower is better)
Translates to: HSSLGNAHHLGRGPSWFKSSSRI*GPLRWI
Trigger: TATCCACCGAAGAGGTCCCAAGATTCTGCTACTGCT...TTTGAACCATGAGGGCCCTCTGCCCAGGTGATGGGCATTCCCTAAGCTGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp GCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTGGGGAAGAACCAGGATCCAGCATaGAGTCTCTTCAGTTCAGTC +
Preference number: 5 (lower is better)
Translates to: ATLQPLLFGQCRLAWVGKNQDPA*SLFSSV
Trigger: GACTGAACTGAAGAGACTCAATGCTGGATCCTGGTT...CTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGAACATGATGGAAAGGTaGAGGGCTGCAGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGNMMER*RAAASS
Trigger: GGAGGAAGCTGCAGCCCTCAACCTTTCCATCATGTT...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGTGGCTTGGGGCACCCTaGCATTCAGCACAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWWLGAP*HSAQSP
Trigger: TGGAGACTGTGCTGAATGCAAGGGTGCCCCAAGCCA...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCGAGAAGAGCCAGGGCTaGTTCACTACAAATAGGTTC +
Preference number: 5 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPEKSQG*FTTNRF
Trigger: GAACCTATTTGTAGTGAACAAGCCCTGGCTCTTCTC...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS CCA 90 bp CCAGCATTGAGTCTCTTCAGTTCAGTCCAGGAGAAGTCACTGCTGTaGGCTGTGATTCGGGTTGGGAATACAGAGGCTACATTCGTGGTC +
Preference number: 5 (lower is better)
Translates to: PALSLFSSVQEKSLL*AVIRVGNTEATFVV
Trigger: GACCACGAATGTAGCCTCTGTATTCCCAACCCGAATCACAGCCCACAGCAGTGACTTCTCCTGGACTGAACTGAAGAGACTCAATGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS CCA 90 bp CCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTaGGGAAGCAGGGCAGGGCATTCACTCCATCATGAAATTGTTGAT +
Preference number: 5 (lower is better)
Translates to: PLSNPCCLGNVDWLG*GSRAGHSLHHEIVD
Trigger: ATCAACAATTTCATGATGGAGTGAATGCCCTGCCCTGCTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTCAGATACAGTCGCACTaGCTGGTTTGCATCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLAQIQSH*LVCILS
Trigger: AGAGAGGATGCAAACCAGCAAGTGCGACTGTATCTG...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR CAA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAACCAGGATCCAGCATaGAGTCTCTTCAGTTCAGTC +
Preference number: 5 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGNQDPA*SLFSSV
Trigger: GACTGAACTGAAGAGACTCAATGCTGGATCCTGGTT...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCGAGAAGAGCCAGGGCTaGTTCACTACAAATAGGTTC +
Preference number: 5 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGEKSQG*FTTNRF
Trigger: GAACCTATTTGTAGTGAACAAGCCCTGGCTCTTCTC...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCCTTAACAAATCTTCTTaGGAGGAGGAAGGTCCACAA +
Preference number: 5 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPLNKSS*EEEGPQ
Trigger: TTGTGGACCTTCCTCCTCCAAAGAAGATTTGTTAAG...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCACTCCATCATGAAATaGTTGATCCTTGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTHSIMK*LILVSS
Trigger: GCTGCTGACAAGGATCAACAATTTCATGATGGAGTG...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTTCCAACCCTTGCTGTTaGGGCAATGTAGACTGGCTT +
Preference number: 5 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLASNPCC*GNVDWL
Trigger: AAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGA...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCCAGTAGGAACCTGTCTTaGATATCCAATAGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: SPGQRALMVQNLLLAKLPSRNLS*ISNSGR
Trigger: TCTGCCACTATTGGATATCAAAGACAGGTTCCTACT...GGGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453994.6
CDS-3UTR CAA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCTCCTTATGCAATGCCTaGATATCCAATAGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPSLCNA*ISNSGR
Trigger: TCTGCCACTATTGGATATCAAGGCATTGCATAAGGA...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGAGAAGAGCCAGGGCTaGTTCACTACAAATAGGTTC +
Preference number: 5 (lower is better)
Translates to: LQPTTPEAFHLSHSPTLAEKSQG*FTTNRF
Trigger: GAACCTATTTGTAGTGAACAAGCCCTGGCTCTTCTC...AGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CCCCACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCTCCATCATGAAATTGTaGATCCTTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: PHLQPTTPEAFHLSHSPTSIMKL*ILVSST
Trigger: AGTGCTGCTGACAAGGATCAACAATTTCATGATGGA...GGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCCACTCCATCATGAAATaGTTGATCCTTGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGHSIMK*LILVSS
Trigger: GCTGCTGACAAGGATCAACAATTTCATGATGGAGTG...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCGCCACTCTCCAACCCTaGCTGTTTGGGCAATGTAGA +
Preference number: 5 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNAATLQP*LFGQCR
Trigger: TCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp AACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCATCACCTGGGCAGGAATTCATTGAAGTaGTGCAGGTCATTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: NPKGSRFHSSLGNAHHLGRNSLK*CRSLRR
Trigger: CCTTCTCAATGACCTGCACAACTTCAATGAATTCCT...GCCCAGGTGATGGGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS-3UTR CAA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTCACTCCATCATGAAATaGTTGATCCTTGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLHSIMK*LILVSS
Trigger: GCTGCTGACAAGGATCAACAATTTCATGATGGAGTG...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTAGGAATTCATTGAAGTaGTGCAGGTCATTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLRNSLK*CRSLRR
Trigger: CCTTCTCAATGACCTGCACAACTTCAATGAATTCCT...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS-3UTR CAA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGAGGAGCAGCAGCACCTaGTGGAGGCTGTGCAGATGC +
Preference number: 5 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRRSSST*WRLCRC
Trigger: GCATCTGCACAGCCTCCACAAGGTGCTGCTGCTCCT...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCAACCAGGATCCAGCATaGAGTCTCTTCAGTTCAGTC +
Preference number: 5 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNANQDPA*SLFSSV
Trigger: GACTGAACTGAAGAGACTCAATGCTGGATCCTGGTT...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTCCTTATGCAATGCCTaGATATCCAATAGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGSLCNA*ISNSGR
Trigger: TCTGCCACTATTGGATATCAAGGCATTGCATAAGGA...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp ATCACCTGGGCAGAGGGCCCTCATGGTTCAAAACCTCCTGTTGGCAAAGCTCCCATGGTGGAAACACAATaGGTAATGACCCATATGATT +
Preference number: 5 (lower is better)
Translates to: ITWAEGPHGSKPPVGKAPMVETQ*VMTHMI
Trigger: AATCATATGGGTCATTACCAATTGTGTTTCCACCAT...GGGAGCTTTGCCAACAGGAGGTTTTGAACCATGAGGGCCCTCTGCCCAGGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CACTTGCAACCCACCACCCCTGAAGCATTCCACTTAAGCCACTCTCCAACCCTTTCCATCATGAAATTGTaGATCCTTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: HLQPTTPEAFHLSHSPTLSIMKL*ILVSST
Trigger: AGTGCTGCTGACAAGGATCAACAATTTCATGATGGA...AAGGGTTGGAGAGTGGCTTAAGTGGAATGCTTCAGGGGTGGTGGGTTGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCGGAAGAGGAATTCATaGAAGTTGTGCAGGTCATTG +
Preference number: 5 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNARKRNS*KLCRSL
Trigger: CAATGACCTGCACAACTTCAATGAATTCCTCTTCCG...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS-3UTR CAA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAAAGGAGCAGCAGCACCTaGTGGAGGCTGTGCAGATGC +
Preference number: 5 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKRSSST*WRLCRC
Trigger: GCATCTGCACAGCCTCCACAAGGTGCTGCTGCTCCT...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCCAGGTGCCCGTCGTaGGACATTAGCCCGATCTTC +
Preference number: 5 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRSRCPS*DISPIF
Trigger: GAAGATCGGGCTAATGTCCAACGACGGGCACCTGGA...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAAAGCAGCTGGCAGTCGTaGGTGGTGACCGAATCCACC +
Preference number: 5 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKSSWQS*VVTEST
Trigger: GGTGGATTCGGTCACCACCAACGACTGCCAGCTGCT...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp CCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGATGGTGGAAACACAATaGGTAATGACCCATATGATT +
Preference number: 5 (lower is better)
Translates to: PLKPLSNPCCLGNVDWLGMVETQ*VMTHMI
Trigger: AATCATATGGGTCATTACCAATTGTGTTTCCACCAT...CCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCCTTAACAAATCTTCTTaGGAGGAGGAAGGTCCACAA +
Preference number: 5 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNALNKSS*EEEGPQ
Trigger: TTGTGGACCTTCCTCCTCCAAAGAAGATTTGTTAAG...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGTCCATCATGAAATTGTaGATCCTTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWSIMKL*ILVSST
Trigger: AGTGCTGCTGACAAGGATCAACAATTTCATGATGGA...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp ATCTCAGGTCAAAACCCCAAAGGGAGCAGATTCCATAGCAGCTTAGGGAATGCCTCCATCATGAAATTGTaGATCCTTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: ISGQNPKGSRFHSSLGNASIMKL*ILVSST
Trigger: AGTGCTGCTGACAAGGATCAACAATTTCATGATGGA...GGCATTCCCTAAGCTGCTATGGAATCTGCTCCCTTTGGGGTTTTGACCTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACAAACAGGTGGCACTGTaGCCACCTACAGGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNKQVAL*PPTGGC
Trigger: ACAGCCTCCTGTAGGTGGCAACAGTGCCACCTGTTT...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACCAAAAGACCATGGCTaGGGGCACCCTTGCATTCAG +
Preference number: 5 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKPKDHG*GHPCIQ
Trigger: CTGAATGCAAGGGTGCCCCAAGCCATGGTCTTTTGG...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGGCCACTCTCCAACCCTaGCTGTTTGGGCAATGTAGA +
Preference number: 5 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRATLQP*LFGQCR
Trigger: TCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGC...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGAGCAGTAGCAGAATCTaGGGACCTCTTCGGTGGATA +
Preference number: 5 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRSSSRI*GPLRWI
Trigger: TATCCACCGAAGAGGTCCCAAGATTCTGCTACTGCT...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp AGCATTCCACTTAAGCCACTCTCCAACCCTTGCTGTTTGGGCAATGTAGACTGGATGGTGGAAACACAATaGGTAATGACCCATATGATT +
Preference number: 5 (lower is better)
Translates to: SIPLKPLSNPCCLGNVDWMVETQ*VMTHMI
Trigger: AATCATATGGGTCATTACCAATTGTGTTTCCACCAT...CCAGTCTACATTGCCCAAACAGCAAGGGTTGGAGAGTGGCTTAAGTGGAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCCAACCCTTGCTGTTaGGGCAATGTAGACTGGCTT +
Preference number: 5 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRSNPCC*GNVDWL
Trigger: AAGCCAGTCTACATTGCCCAAACAGCAAGGGTTGGA...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACAGATACAGTCGCACTaGCTGGTTTGCATCCTCTCT +
Preference number: 5 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKQIQSH*LVCILS
Trigger: AGAGAGGATGCAAACCAGCAAGTGCGACTGTATCTG...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS-3UTR CAA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAAAGCAGTAGCAGAATCTaGGGACCTCTTCGGTGGATA +
Preference number: 5 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKSSSRI*GPLRWI
Trigger: TATCCACCGAAGAGGTCCCAAGATTCTGCTACTGCT...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGCGGAAGAGGAATTCATaGAAGTTGTGCAGGTCATTG +
Preference number: 5 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRRKRNS*KLCRSL
Trigger: CAATGACCTGCACAACTTCAATGAATTCCTCTTCCG...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS-3UTR CAA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACCGGAAGAGGAATTCATaGAAGTTGTGCAGGTCATTG +
Preference number: 5 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNRKRNS*KLCRSL
Trigger: CAATGACCTGCACAACTTCAATGAATTCCTCTTCCG...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS-3UTR CAA 90 bp GTTTCATTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGCACTCCATCATGAAATaGTTGATCCTTGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VSFEEKLLITHSLPKHLRHSIMK*LILVSS
Trigger: GCTGCTGACAAGGATCAACAATTTCATGATGGAGTG...CCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAATGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACCTTAACAAATCTTCTTaGGAGGAGGAAGGTCCACAA +
Preference number: 5 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNLNKSS*EEEGPQ
Trigger: TTGTGGACCTTCCTCCTCCAAAGAAGATTTGTTAAG...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAAAGGAATTCATTGAAGTaGTGCAGGTCATTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKRNSLK*CRSLRR
Trigger: CCTTCTCAATGACCTGCACAACTTCAATGAATTCCT...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS-3UTR CAA 90 bp TTTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACTTAACAAATCTTCTTaGGAGGAGGAAGGTCCACAA +
Preference number: 5 (lower is better)
Translates to: FEEKLLITHSLPKHLRSKLNKSS*EEEGPQ
Trigger: TTGTGGACCTTCCTCCTCCAAAGAAGATTTGTTAAG...TTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS-3UTR CAA 90 bp TTGAGGAGAAACTTCTCATTACTCACTCTCTTCCCAAACATCTCAGGTCAAAACATGGTGGAAACACAATaGGTAATGACCCATATGATT +
Preference number: 5 (lower is better)
Translates to: LRRNFSLLTLFPNISGQNMVETQ*VMTHMI
Trigger: AATCATATGGGTCATTACCAATTGTGTTTCCACCAT...GTTTTGACCTGAGATGTTTGGGAAGAGAGTGAGTAATGAGAAGTTTCTCCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS TCA 72 bp CCCAGACGGAGCAGCAGCCGGGGGACTCGGCCATGGTaGAGGCCTTTGCTCAGCGGCAGCTCCGCTCCGCTC +
Preference number: 6 (lower is better)
Translates to: PRRSSSRGTRPW*RPLLSGSSAPL
Trigger: GAGCGGAGCGGAGCTGCCGCTGAGCAAAGGCCTTCACCATGGCCGAGTCCCCCGGCTGCTGCTCCGTCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS CCA 72 bp CTGGGGCATTTCCTCCAGTGGCAGCTATACAGGCAGTaGAGGCAGCGGGCCCAGACGGAGCAGCAGCCGGGG +
Preference number: 6 (lower is better)
Translates to: LGHFLQWQLYRQ*RQRAQTEQQPG
Trigger: CCCCGGCTGCTGCTCCGTCTGGGCCCGCTGCCTCCACTGCCTGTATAGCTGCCACTGGAGGAAATGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374382.4
ENST00000453994.6
CDS GCA 72 bp TCCATCCAGTGTCCCCAGCGGCGGAAGAGGAATCTTTaGTCAGCGGCAGCTCCGCTCCGCTCTCCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: SIQCPQRRKRNL*SAAAPLRSPLC
Trigger: GCAGAGAGGAGAGCGGAGCGGAGCTGCCGCTGAGCAAAGATTCCTCTTCCGCCGCTGGGGACACTGGATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538649.5
CDS CAA 72 bp GTCCATCCAGTGTCCCCAGCGGCGGAAGAGGAATCTTaGCTCAGCGGCAGCTCCGCTCCGCTCTCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: VHPVSPAAEEES*LSGSSAPLSSL
Trigger: CAGAGAGGAGAGCGGAGCGGAGCTGCCGCTGAGCAAAGATTCCTCTTCCGCCGCTGGGGACACTGGATGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538649.5
CDS TCA 72 bp CAGGCCAGGAGGGCAATTCCAGCGGCTGCTCCAATATaGAGGAATGGGGCTGTGGCCTGCAGTGACACACGC +
Preference number: 6 (lower is better)
Translates to: QARRAIPAAAPI*RNGAVACSDTR
Trigger: GCGTGTGTCACTGCAGGCCACAGCCCCATTCCTTCATATTGGAGCAGCCGCTGGAATTGCCCTCCTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS GCA 72 bp GTGGCCTGCAGTGACACACGCAAGCTATGCCACTCCTaGTGCCATTGGATGTCCAGTCCCACAAGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: VACSDTRKLCHS*CHWMSSPTRPA
Trigger: GGCTGGCCTTGTGGGACTGGACATCCAATGGCAGCAGGAGTGGCATAGCTTGCGTGTGTCACTGCAGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS GCA 72 bp GGGACCTGCAGTGACACACGCAAGCTATGCCACTCCTaGTGCCATTGGATGTCCAGTCCCACAAGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: GTCSDTRKLCHS*CHWMSSPTRPA
Trigger: GGCTGGCCTTGTGGGACTGGACATCCAATGGCAGCAGGAGTGGCATAGCTTGCGTGTGTCACTGCAGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472623.1
CDS GCA 72 bp GAGGAAGAGCAGGCCAAACCAGATACAGTCGCACTTTaGTCAGCGGCAGCTCCGCTCCGCTCTCCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: EEEQAKPDTVAL*SAAAPLRSPLC
Trigger: GCAGAGAGGAGAGCGGAGCGGAGCTGCCGCTGAGCAAAGTGCGACTGTATCTGGTTTGGCCTGCTCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536730.5
CDS CCA 72 bp GTGGGGAGAGGGGGTCCTGGCAACATCACCATGGCTTaGGGCACCCTTGCATTCAGCACAGTCTCCAATGTC +
Preference number: 6 (lower is better)
Translates to: VGRGGPGNITMA*GTLAFSTVSNV
Trigger: GACATTGGAGACTGTGCTGAATGCAAGGGTGCCCCAAGCCATGGTGATGTTGCCAGGACCCCCTCTCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472623.1
CDS GCA 72 bp GGGAATACAGAGGCTACATTCGTGGTCCTGCTGAGGTaGTCATCATGCATGAGGAAGGGGACCCCATCGGAG +
Preference number: 6 (lower is better)
Translates to: GNTEATFVVLLR*SSCMRKGTPSE
Trigger: CTCCGATGGGGTCCCCTTCCTCATGCATGATGAGCACCTCAGCAGGACCACGAATGTAGCCTCTGTATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS GCA 72 bp GCCTCCCTGACGTCCATATATCTGGCGCATTCCAGGTaGCCGTCGTTGGACATTAGCCCGATCTTCATCTGG +
Preference number: 6 (lower is better)
Translates to: ASLTSIYLAHSR*PSLDISPIFIW
Trigger: CCAGATGAAGATCGGGCTAATGTCCAACGACGGGCACCTGGAATGCGCCAGATATATGGACGTCAGGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS GCA 72 bp TCGGTTCAGCCCTATGAGTCAAACAGGTGGCACTGTTaGCACCTACAGGAGGCTGTGTGGGTCCTCTCCCAA +
Preference number: 6 (lower is better)
Translates to: SVQPYESNRWHC*HLQEAVWVLSQ
Trigger: TTGGGAGAGGACCCACACAGCCTCCTGTAGGTGGCAACAGTGCCACCTGTTTGACTCATAGGGCTGAACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS CAA 90 bp TGTCCCCAGCGGCGGAAGAGGAATTCATTGAAGTTGTGCAGGTCATaGAGAAGGACGAGCCCGATGTACAGCCAGCTCAGGGAAAGGAGG +
Preference number: 6 (lower is better)
Translates to: CPQRRKRNSLKLCRS*RRTSPMYSQLRERR
Trigger: CCTCCTTTCCCTGAGCTGGCTGTACATCGGGCTCGTCCTTCTCAATGACCTGCACAACTTCAATGAATTCCTCTTCCGCCGCTGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS TCA 72 bp TTAAGAAACTGGGGCCTCTCCGTTCTGTTGCCTCCCTaGCGTCCATATATCTGGCGCATTCCAGGTGCCCGT +
Preference number: 6 (lower is better)
Translates to: LRNWGLSVLLPP*RPYIWRIPGAR
Trigger: ACGGGCACCTGGAATGCGCCAGATATATGGACGTCAGGGAGGCAACAGAACGGAGAGGCCCCAGTTTCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS CCA 72 bp CCAGGAGAAGTCACTGCTGTGGGCTGTGATTCGGGTTaGGAATACAGAGGCTACATTCGTGGTCCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: PGEVTAVGCDSG*EYRGYIRGPAE
Trigger: CTCAGCAGGACCACGAATGTAGCCTCTGTATTCCCAACCCGAATCACAGCCCACAGCAGTGACTTCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS CCA 72 bp TTTCAGTCCTCGGTTCAGCCCTATGAGTCAAACAGGTaGCACTGTTGCCACCTACAGGAGGCTGTGTGGGTC +
Preference number: 6 (lower is better)
Translates to: FQSSVQPYESNR*HCCHLQEAVWV
Trigger: GACCCACACAGCCTCCTGTAGGTGGCAACAGTGCCACCTGTTTGACTCATAGGGCTGAACCGAGGACTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS CAA 72 bp GGGGTCCTGGCAACATCACCATGGCTTGGGGCACCCTaGCATTCAGCACAGTCTCCAATGTCTGGATCACAA +
Preference number: 6 (lower is better)
Translates to: GVLATSPWLGAP*HSAQSPMSGSQ
Trigger: TTGTGATCCAGACATTGGAGACTGTGCTGAATGCAAGGGTGCCCCAAGCCATGGTGATGTTGCCAGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472623.1
CDS CAA 90 bp GTGTGGTTCTGTGGGGGTCGGCGCAAGTCGAACATGATGGAAAGGTaGAGGGCTGCAGCTTCCTCCAATAGCTCTTCTAATGCTGGTACC +
Preference number: 6 (lower is better)
Translates to: VWFCGGRRKSNMMER*RAAASSNSSSNAGT
Trigger: GGTACCAGCATTAGAAGAGCTATTGGAGGAAGCTGCAGCCCTCAACCTTTCCATCATGTTCGACTTGCGCCGACCCCCACAGAACCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS TCA 72 bp TGCCTCCTCCCTTTTTCAGTCCTCGGTTCAGCCCTATaGGTCAAACAGGTGGCACTGTTGCCACCTACAGGA +
Preference number: 6 (lower is better)
Translates to: CLLPFSVLGSAL*VKQVALLPPTG
Trigger: TCCTGTAGGTGGCAACAGTGCCACCTGTTTGACTCATAGGGCTGAACCGAGGACTGAAAAAGGGAGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000453994.6
ENST00000536730.5
ENST00000538649.5
CDS GCA 72 bp TGTCCCCAGCGGCGGAAGAGGAATTCATTGAAGTTGTaGAGGTCATTGAGAAGGACGAGCCCGATGTACAGC +
Preference number: 6 (lower is better)
Translates to: CPQRRKRNSLKL*RSLRRTSPMYS
Trigger: GCTGTACATCGGGCTCGTCCTTCTCAATGACCTGCACAACTTCAATGAATTCCTCTTCCGCCGCTGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS GCA 72 bp GGGTCCTGGCAACATCACCATGGCTTGGGGCACCCTTaGATTCAGCACAGTCTCCAATGTCTGGATCACAAA +
Preference number: 6 (lower is better)
Translates to: GSWQHHHGLGHP*IQHSLQCLDHK
Trigger: TTTGTGATCCAGACATTGGAGACTGTGCTGAATGCAAGGGTGCCCCAAGCCATGGTGATGTTGCCAGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472623.1
CDS CCA 72 bp AACCCTTGCTGTTTGGGCAATGTAGACTGGCTTGGGTaGGGAAGCAGGGCAGGGCATTCACTCCATCATGAA +
Preference number: 6 (lower is better)
Translates to: NPCCLGNVDWLG*GSRAGHSLHHE
Trigger: TTCATGATGGAGTGAATGCCCTGCCCTGCTTCCCCACCCAAGCCAGTCTACATTGCCCAAACAGCAAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS CAA 72 bp CGGCGGAAGAGGAATTCATTGAAGTTGTGCAGGTCATaGAGAAGGACGAGCCCGATGTACAGCCAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: RRKRNSLKLCRS*RRTSPMYSQLR
Trigger: CCTGAGCTGGCTGTACATCGGGCTCGTCCTTCTCAATGACCTGCACAACTTCAATGAATTCCTCTTCCGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000536730.5
CDS TCA 72 bp AGAAGGGTCGCCTCTCTAGGAACCAGGATCCAGCATTaGGTCTCTTCAGTTCAGTCCAGGAGAAGTCACTGC +
Preference number: 6 (lower is better)
Translates to: RRVASLGTRIQH*VSSVQSRRSHC
Trigger: GCAGTGACTTCTCCTGGACTGAACTGAAGAGACTCAATGCTGGATCCTGGTTCCTAGAGAGGCGACCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS CCA 72 bp CGTCCATATATCTGGCGCATTCCAGGTGCCCGTCGTTaGACATTAGCCCGATCTTCATCTGGTAGCCAAAAG +
Preference number: 6 (lower is better)
Translates to: RPYIWRIPGARR*TLARSSSGSQK
Trigger: CTTTTGGCTACCAGATGAAGATCGGGCTAATGTCCAACGACGGGCACCTGGAATGCGCCAGATATATGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS CAA 72 bp CAGAAGGGTCGCCTCTCTAGGAACCAGGATCCAGCATaGAGTCTCTTCAGTTCAGTCCAGGAGAAGTCACTG +
Preference number: 6 (lower is better)
Translates to: QKGRLSRNQDPA*SLFSSVQEKSL
Trigger: CAGTGACTTCTCCTGGACTGAACTGAAGAGACTCAATGCTGGATCCTGGTTCCTAGAGAGGCGACCCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5
CDS CCA 72 bp AGTCTCTTCAGTTCAGTCCAGGAGAAGTCACTGCTGTaGGCTGTGATTCGGGTTGGGAATACAGAGGCTACA +
Preference number: 6 (lower is better)
Translates to: SLFSSVQEKSLL*AVIRVGNTEAT
Trigger: TGTAGCCTCTGTATTCCCAACCCGAATCACAGCCCACAGCAGTGACTTCTCCTGGACTGAACTGAAGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374382.4
ENST00000453994.6
ENST00000472623.1
ENST00000536730.5
ENST00000538649.5