RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GDF11 (Homo sapiens)

Ensembl gene IDs: ENSG00000135414

Ensembl transcript IDs: ENST00000257868.10, ENST00000546799.1

Found 511 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATATGTTCAGAGGGGCACTGGCCAGGTCCACACACATCATAAGGTaGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCTGTGCCCCC +
Preference number: 1 (lower is better)
Translates to: DMFRGALARSTHIIR*EGVLTPTGLLSCAP
Trigger: GGGGGCACAGCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGACCTGGCCAGTGCCCCTCTGAACATATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 90 bp CAGCTTGGAGTACAGTGGCTATTTACAGGCCCAATTATAGCACACTaGAGCCTTGACCCTCTGGCCTCAAGTGGTCCTCCTGCCACAGCC +
Preference number: 1 (lower is better)
Translates to: QLGVQWLFTGPIIAH*SLDPLASSGPPATA
Trigger: GGCTGTGGCAGGAGGACCACTTGAGGCCAGAGGGTCAAGGCTGCAGTGTGCTATAATTGGGCCTGTAAATAGCCACTGTACTCCAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 90 bp AATGTGAGTGGTGTTGATGGCCGGGTGTGTCTTGTCCTTCAGGATTaGGGCAGAAGGAAGGATGAAGAACAGGGCCAGAGAGGCTTGGGG +
Preference number: 1 (lower is better)
Translates to: NVSGVDGRVCLVLQD*GRRKDEEQGQRGLG
Trigger: CCCCAAGCCTCTCTGGCCCTGTTCTTCATCCTTCCTTCTGCCCCAATCCTGAAGGACAAGACACACCCGGCCATCAACACCACTCACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 90 bp TGGCCGGGTGTGTCTTGTCCTTCAGGATTGGGGCAGAAGGAAGGATaGAGAACAGGGCCAGAGAGGCTTGGGGTTAGCATAGCTGCTATA +
Preference number: 1 (lower is better)
Translates to: WPGVSCPSGLGQKEG*RTGPERLGVSIAAI
Trigger: TATAGCAGCTATGCTAACCCCAAGCCTCTCTGGCCCTGTTCTTCATCCTTCCTTCTGCCCCAATCCTGAAGGACAAGACACACCCGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 90 bp TTAAAGCTCACCAACATCACCTTCTCAAGGGTGGTCACATACCTTTaGCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGG +
Preference number: 1 (lower is better)
Translates to: LKLTNITFSRVVTYL*PFHQLAKGESHALG
Trigger: CCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCAAAGGTATGTGACCACCCTTGAGAAGGTGATGTTGGTGAGCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 90 bp CCTTCCCACCTTGGTCTGCTGGCTCTATTCCCTAGCCCAGAGCAGTaGTTTGGATTCAAATGCCCTGTAACCTTCAGCCTCCTTACTGCT +
Preference number: 1 (lower is better)
Translates to: PSHLGLLALFPSPEQ*FGFKCPVTFSLLTA
Trigger: AGCAGTAAGGAGGCTGAAGGTTACAGGGCATTTGAATCCAAATCACTGCTCTGGGCTAGGGAATAGAGCCAGCAGACCAAGGTGGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 90 bp GGTTCCCTCCAGGAAGCCTTGATCTCAGTTGAAGAAGTTCTTTCCTaGCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCT +
Preference number: 1 (lower is better)
Translates to: GSLQEALISVEEVLS*HSNAPVSSILLRHP
Trigger: AGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACTTCTTCAACTGAGATCAAGGCTTCCTGGAGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 90 bp CCCTCAAGCCCAGCTCACTGGCAGGAAAGCTGGACATTGTTGCTTTaGAGCATTGATTTTCCTGCTTCTACGCCACTACAGACCAGAAGC +
Preference number: 1 (lower is better)
Translates to: PSSPAHWQESWTLLL*SIDFPASTPLQTRS
Trigger: GCTTCTGGTCTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAGTGAGCTGGGCTTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 90 bp CACTTCTCTGTTCCTTTCCTTCCACCAAGGAAATGTGAGTGGTGTTaGTGGCCGGGTGTGTCTTGTCCTTCAGGATTGGGGCAGAAGGAA +
Preference number: 1 (lower is better)
Translates to: HFSVPFLPPRKCEWC*WPGVSCPSGLGQKE
Trigger: TTCCTTCTGCCCCAATCCTGAAGGACAAGACACACCCGGCCATCAACACCACTCACATTTCCTTGGTGGAAGGAAAGGAACAGAGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 90 bp CCCTATGGCCGTCTTTGCCCTCTGTCACATAACTTGAAAACTGCCTaGTGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCA +
Preference number: 1 (lower is better)
Translates to: PYGRLCPLSHNLKTA*WPFCSGSLQEALIS
Trigger: TGAGATCAAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTATGTGACAGAGGGCAAAGACGGCCATAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 90 bp AACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGTCACATAACTTaGAAACTGCCTGATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAG +
Preference number: 1 (lower is better)
Translates to: NSEHPMAVFALCHIT*KLPDGLFAVVPSRK
Trigger: CTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTATGTGACAGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 90 bp TCACTCCCTCAAGCCCAGCTCACTGGCAGGAAAGCTGGACATTGTTaGTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGACCA +
Preference number: 1 (lower is better)
Translates to: SLPQAQLTGRKAGHC*FGALIFLLLRHYRP
Trigger: TGGTCTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAGTGAGCTGGGCTTGAGGGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 90 bp AGAGTCCCATTCACTCCCTCAAGCCCAGCTCACTGGCAGGAAAGCTaGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCA +
Preference number: 1 (lower is better)
Translates to: RVPFTPSSPAHWQES*TLLLWSIDFPASTP
Trigger: TGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAGTGAGCTGGGCTTGAGGGAGTGAATGGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 90 bp ATGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGTTaGAGAAGTTCTTTCCTGGCATTCCAATGCCCCTGTCAGCTCCAT +
Preference number: 1 (lower is better)
Translates to: MAFLQWFPPGSLDLS*RSSFLAFQCPCQLH
Trigger: ATGGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACTTCTTCAACTGAGATCAAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 90 bp CTAGGTACCCCCAGTTTCCTGTCCTCTTTCCATCCTTCCTTGGCCTaGATGTCCCAAACCTTATACCACCATGCCCTTAGTGTTTTCTGT +
Preference number: 1 (lower is better)
Translates to: LGTPSFLSSFHPSLA*MSQTLYHHALSVFC
Trigger: ACAGAAAACACTAAGGGCATGGTGGTATAAGGTTTGGGACATGCAGGCCAAGGAAGGATGGAAAGAGGACAGGAAACTGGGGGTACCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 90 bp AGACTAAAATGTCCCCCTTCCAGAATCCTTCCCACCTTGGTCTGCTaGCTCTATTCCCTAGCCCAGAGCAGTGATTTGGATTCAAATGCC +
Preference number: 1 (lower is better)
Translates to: RLKCPPSRILPTLVC*LYSLAQSSDLDSNA
Trigger: GGCATTTGAATCCAAATCACTGCTCTGGGCTAGGGAATAGAGCCAGCAGACCAAGGTGGGAAGGATTCTGGAAGGGGGACATTTTAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 90 bp AGGCTAGAAGCTTCTGTGAGGATGAGGGCTATAGGAAGGAAGGTGTaGATAAGGGCAGGACTTCTTGGTGTTGAGCTGAGTTCTCTTGCT +
Preference number: 1 (lower is better)
Translates to: RLEASVRMRAIGRKV*IRAGLLGVELSSLA
Trigger: AGCAAGAGAACTCAGCTCAACACCAAGAAGTCCTGCCCTTATTCACACCTTCCTTCCTATAGCCCTCATCCTCACAGAAGCTTCTAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 90 bp CTGCCTCGTCTGTCTCTTCTGCCTCTCTCTTTGCCTTCTCACTGCTaGTCTTTTTGTTCCTCTGTCTCTATCACTGTCTCTACATCTCTC +
Preference number: 1 (lower is better)
Translates to: LPRLSLLPLSLPSHC*SFCSSVSITVSTSL
Trigger: GAGAGATGTAGAGACAGTGATAGAGACAGAGGAACAAAAAGAGCAGCAGTGAGAAGGCAAAGAGAGAGGCAGAAGAGACAGACGAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 90 bp AGGAGACTAAAATGTCCCCCTTCCAGAATCCTTCCCACCTTGGTCTaGTGGCTCTATTCCCTAGCCCAGAGCAGTGATTTGGATTCAAAT +
Preference number: 1 (lower is better)
Translates to: RRLKCPPSRILPTLV*WLYSLAQSSDLDSN
Trigger: ATTTGAATCCAAATCACTGCTCTGGGCTAGGGAATAGAGCCAGCAGACCAAGGTGGGAAGGATTCTGGAAGGGGGACATTTTAGTCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 90 bp TCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTACTCTaGCAAGATCACGAGGCATTTGACCTTGGAGGGAGGTATCTGTTC +
Preference number: 1 (lower is better)
Translates to: SVEGRYLMLIAQSLL*QDHEAFDLGGRYLF
Trigger: GAACAGATACCTCCCTCCAAGGTCAAATGCCTCGTGATCTTGGCAGAGTAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 90 bp GAAAAGGCAGAAAGAGTCCCATTCACTCCCTCAAGCCCAGCTCACTaGCAGGAAAGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCT +
Preference number: 1 (lower is better)
Translates to: EKAERVPFTPSSPAH*QESWTLLLWSIDFP
Trigger: AGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAGTGAGCTGGGCTTGAGGGAGTGAATGGGACTCTTTCTGCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 90 bp CTTAGTGTTTTCTGTCTTGCTCCAGGACCCCATCTTCTTAGTCATTaGACACGAGGTTTCCTGTCTCAGATCCTCTTCACCTCCGGTTCT +
Preference number: 1 (lower is better)
Translates to: LSVFCLAPGPHLLSH*TRGFLSQILFTSGS
Trigger: AGAACCGGAGGTGAAGAGGATCTGAGACAGGAAACCTCGTGTTCAATGACTAAGAAGATGGGGTCCTGGAGCAAGACAGAAAACACTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 90 bp TGGATCATCTCAAGAGAACCTTTAGATCTTCCATTCTGTGGAGGCTaGGAGAGGGGTCTTGTTGTCTTTGGGACTGTTTTGGCTCAAGCT +
Preference number: 1 (lower is better)
Translates to: WIISREPLDLPFCGG*ERGLVVFGTVLAQA
Trigger: AGCTTGAGCCAAAACAGTCCCAAAGACAACAAGACCCCTCTCCCAGCCTCCACAGAATGGAAGATCTAAAGGTTCTCTTGAGATGATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 90 bp TGCTACTCAACCACTTCCAGCCTTAGTCTTGTAGTTGGTCTCGAGTaGGGTCAGTGTGCTGATAGAACTGATAAGACAGGGAAAACATGG +
Preference number: 1 (lower is better)
Translates to: CYSTTSSLSLVVGLE*GQCADRTDKTGKTW
Trigger: CCATGTTTTCCCTGTCTTATCAGTTCTATCAGCACACTGACCCCACTCGAGACCAACTACAAGACTAAGGCTGGAAGTGGTTGAGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 90 bp TTTACTCCCATTCCCAACCCTGGAGGCTTTATACAAGTGCTTAAGTaGGTAGGTGTTGGGGAGAGCAGGGTTTGGGGAATAAGGGATAAA +
Preference number: 1 (lower is better)
Translates to: FTPIPNPGGFIQVLK*VGVGESRVWGIRDK
Trigger: TTTATCCCTTATTCCCCAAACCCTGCTCTCCCCAACACCTACTCACTTAAGCACTTGTATAAAGCCTCCAGGGTTGGGAATGGGAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 90 bp CTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTaGCCCATTCTGAGACTTTGGAGAAGTGAACAAAAGGGAATGCTG +
Preference number: 1 (lower is better)
Translates to: LGEQIQKLLPICCEV*PILRLWRSEQKGML
Trigger: CAGCATTCCCTTTTGTTCACTTCTCCAAAGTCTCAGAATGGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 90 bp TTCATTTATTACTCCATTTCAGTCTCTTTCTCAGTGTTTTGTCTCTaGCTCGTCTGTCTCTTCTGCCTCTCTCTTTGCCTTCTCACTGCT +
Preference number: 1 (lower is better)
Translates to: FIYYSISVSFSVFCL*LVCLFCLSLCLLTA
Trigger: AGCAGTGAGAAGGCAAAGAGAGAGGCAGAAGAGACAGACGAGGCAGAGACAAAACACTGAGAAAGAGACTGAAATGGAGTAATAAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 90 bp ACCTTCCAGAAAGATATTCAGCCTTACTTGCCAGGATTCTCTTCTTaGAGCCTAATTATTCTCCTCACTCATCTTACTTCCCCTAGATCT +
Preference number: 1 (lower is better)
Translates to: TFQKDIQPYLPGFSS*SLIILLTHLTSPRS
Trigger: AGATCTAGGGGAAGTAAGATGAGTGAGGAGAATAATTAGGCTTCAAGAAGAGAATCCTGGCAAGTAAGGCTGAATATCTTTCTGGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 90 bp GCCATAATACCTTTATCCCTTAGAAGAGAAGACAAGGAAAAGGACTaGGTTTACCCTTTAAGCCTGTTTATTCCCTTCTGTCATACTCAC +
Preference number: 1 (lower is better)
Translates to: AIIPLSLRREDKEKD*VYPLSLFIPFCHTH
Trigger: GTGAGTATGACAGAAGGGAATAAACAGGCTTAAAGGGTAAACTCAGTCCTTTTCCTTGTCTTCTCTTCTAAGGGATAAAGGTATTATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 90 bp TTGAGATGCTATTTTAGCCACTCTTGTGTAACAAGGCAAGTTCGTTaGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACC +
Preference number: 1 (lower is better)
Translates to: LRCYFSHSCVTRQVR*LCWFRFLSNFVEET
Trigger: GGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAACGAACTTGCCTTGTTACACAAGAGTGGCTAAAATAGCATCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCCAAGAGGCCTGGTGGTaGAGTAAGGATAGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSQEAWW*SKDRVW
Trigger: CCACACCCTATCCTTACTTCACCACCAGGCCTCTTG...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCAAACACTCCCCACCCTaGCTATGCCCCTGCTTCCCC +
Preference number: 2 (lower is better)
Translates to: QYIEPAVALSPILDQVDVKHSPP*LCPCFP
Trigger: GGGGAAGCAGGGGCATAGTCAGGGTGGGGAGTGTTT...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp GTCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCCCTCAATTCCCACCTaGCTCCCTCTGTTGTATTGC +
Preference number: 2 (lower is better)
Translates to: VHTHHKVGGGANSHWVAEPSIPT*LPLLYC
Trigger: GCAATACAACAGAGGGAGGCAGGTGGGAATTGAGGG...CTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCCTTTCCCCTCCCTGCTaGCAGGTACTGTTAGATTCC +
Preference number: 2 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSLSPPC*QVLLDS
Trigger: GGAATCTAACAGTACCTGGCAGCAGGGAGGGGAAAG...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCACTACTCTGGTGCCCTaGTTATCTGTCCCACAGCGA +
Preference number: 2 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSTTLVP*LSVPQR
Trigger: TCGCTGTGGGACAGATAACCAGGGCACCAGAGTAGT...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGGAAACTGAGGCACAGTaGGTCCAGAGGAGAATGGGT +
Preference number: 2 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRETEAQ*VQRRMG
Trigger: ACCCATTCTCCTCTGGACTCACTGTGCCTCAGTTTC...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCAAATGTGAGTGGTGTTaGTGGCCGGGTGTGTCTTGT +
Preference number: 2 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSKCEWC*WPGVSC
Trigger: ACAAGACACACCCGGCCATCAACACCACTCACATTT...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCTCTTCACCACTACTCTaGTGCCCTGGTTATCTGTCC +
Preference number: 2 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSSSPLL*CPGYLS
Trigger: GGACAGATAACCAGGGCACCAGAGTAGTGGTGAAGA...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 90 bp GGATTCAAATGCCCTGTAACCTTCAGCCTCCTTACTGCTCCTTTCTaGACCTCTCCTAACGCTTTCCAGACCCAGGGGACTCTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: GFKCPVTFSLLTAPF*TSPNAFQTQGTLGS
Trigger: AGACCCCAGAGTCCCCTGGGTCTGGAAAGCGTTAGGAGAGGTCAAGAAAGGAGCAGTAAGGAGGCTGAAGGTTACAGGGCATTTGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 90 bp GTTAAAGCTCACCAACATCACCTTCTCAAGGGTGGTCACATACCTTaGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: VKAHQHHLLKGGHIP*PLPPTGQGGESCSW
Trigger: CCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCAAAGGTATGTGACCACCCTTGAGAAGGTGATGTTGGTGAGCTTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTCCCTCACCTTGCCAGTaGAAGAAAGGAGGCTTGGTG +
Preference number: 2 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKAPSPCQ*KKGGLV
Trigger: CACCAAGCCTCCTTTCTTCCACTGGCAAGGTGAGGG...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGGGGAGAGCAGGGTTTaGGGAATAAGGGATAAACGG +
Preference number: 2 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSGESRV*GIRDKR
Trigger: CCGTTTATCCCTTATTCCCCAAACCCTGCTCTCCCC...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTAGGTCGGGGAACGGTGTaGTGTTCGCGGGAAGAGTGG +
Preference number: 2 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLGRGTV*CSREEW
Trigger: CCACTCTTCCCGCGAACATCACACCGTTCCCCGACC...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCGGGTTGTGGGAGGAATaGATGGGCCTAGCTAGTGAC +
Preference number: 2 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPGLWEE*MGLASD
Trigger: GTCACTAGCTAGGCCCATTCATTCCTCCCACAACCC...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTCTCGTCTGTCTCTTCTaGCTCTCTCTTTGCCTTCTC +
Preference number: 2 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSLVCLF*LSLCLL
Trigger: GAGAAGGCAAAGAGAGAGGCAGAAGAGACAGACGAG...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCGTATTGCACACGGCTTaGTCGGGGAACGGTGTGATG +
Preference number: 2 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPVLHTA*SGNGVM
Trigger: CATCACACCGTTCCCCGACCAAGCCGTGTGCAATAC...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 90 bp TTCACTCCCTCAAGCCCAGCTCACTGGCAGGAAAGCTGGACATTGTaGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGACC +
Preference number: 2 (lower is better)
Translates to: FTPSSPAHWQESWTL*LWSIDFPASTPLQT
Trigger: GGTCTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAGTGAGCTGGGCTTGAGGGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 90 bp CCATTCACTCCCTCAAGCCCAGCTCACTGGCAGGAAAGCTGGACATaGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAG +
Preference number: 2 (lower is better)
Translates to: PFTPSSPAHWQESWT*LLWSIDFPASTPLQ
Trigger: CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAGTGAGCTGGGCTTGAGGGAGTGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTCCTAGCCCAGAGCAGTaGTTTGGATTCAAATGCCCT +
Preference number: 2 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKAPSPEQ*FGFKCP
Trigger: AGGGCATTTGAATCCAAATCACTGCTCTGGGCTAGG...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCAGATCACGAGGCATTTaGCCTTGGAGGGAGGTATCT +
Preference number: 2 (lower is better)
Translates to: QYIEPAVALSPILDQVDVRSRGI*PWREVS
Trigger: AGATACCTCCCTCCAAGGTCAAATGCCTCGTGATCT...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp TCTAAGTGTCCCCCATATTTAATGCCCCAGCTCTCTAGAATCTGTAGAGGGAAGCCCACCTTGGTCTGCTaGCTCTATTCCCTAGCCCAG +
Preference number: 2 (lower is better)
Translates to: SKCPPYLMPQLSRICRGKPTLVC*LYSLAQ
Trigger: CTGGGCTAGGGAATAGAGCCAGCAGACCAAGGTGGG...CTTCCCTCTACAGATTCTAGAGAGCTGGGGCATTAAATATGGGGGACACTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTTCAGAATTCATCTCTTaGCTGTGGCGGGTGCTGTCA +
Preference number: 2 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKASEFIS*LWRVLS
Trigger: TGACAGCACCCGCCACAGCCAAGAGATGAATTCTGA...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 90 bp GTTGTTCTAGGTACCCCCAGTTTCCTGTCCTCTTTCCATCCTTCCTaGGCCTGCATGTCCCAAACCTTATACCACCATGCCCTTAGTGTT +
Preference number: 2 (lower is better)
Translates to: VVLGTPSFLSSFHPS*ACMSQTLYHHALSV
Trigger: AACACTAAGGGCATGGTGGTATAAGGTTTGGGACATGCAGGCCAAGGAAGGATGGAAAGAGGACAGGAAACTGGGGGTACCTAGAACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 90 bp GCCCAGCTCACTGGCAGGAAAGCTGGACATTGTTGCTTTGGAGCATaGATTTTCCTGCTTCTACGCCACTACAGACCAGAAGCTGTAGAT +
Preference number: 2 (lower is better)
Translates to: AQLTGRKAGHCCFGA*IFLLLRHYRPEAVD
Trigger: ATCTACAGCTTCTGGTCTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAGTGAGCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCAGGTCTCTCTCTTGGCTaGGGGAATTTGGGCATAAGC +
Preference number: 2 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPGLSLG*GNLGIS
Trigger: GCTTATGCCCAAATTCCCTCAGCCAAGAGAGAGACC...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGGTGGTCACATACCTTTaGCCCTTCCACCAACTGGCC +
Preference number: 2 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQVVTYL*PFHQLA
Trigger: GGCCAGTTGGTGGAAGGGGCAAAGGTATGTGACCAC...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCAATAAACGGGGCACAGTaGGCAGGGGCCCTCCTATTC +
Preference number: 2 (lower is better)
Translates to: GRWAGYPSETEEILYAESINGAQ*AGALLF
Trigger: GAATAGGAGGGCCCCTGCCCACTGTGCCCCGTTTAT...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTTTGCCTTCTCACTGCTaGTCTTTTTGTTCCTCTGTC +
Preference number: 2 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKALPSHC*SFCSSV
Trigger: GACAGAGGAACAAAAAGAGCAGCAGTGAGAAGGCAA...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTACATCCTCTAAGCTCTTaGCTGGAGCCAAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLHPLSS*LEPRGL
Trigger: CAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATG...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCCATCCTTCCTTGGCCTaGATGTCCCAAACCTTATAC +
Preference number: 2 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPHPSLA*MSQTLY
Trigger: GTATAAGGTTTGGGACATGCAGGCCAAGGAAGGATG...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCCTTGTCCTTCAGGATTaGGGCAGAAGGAAGGATGAA +
Preference number: 2 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPLVLQD*GRRKDE
Trigger: TTCATCCTTCCTTCTGCCCCAATCCTGAAGGACAAG...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 90 bp GCATGTCCCAAACCTTATACCACCATGCCCTTAGTGTTTTCTGTCTaGCTCCAGGACCCCATCTTCTTAGTCATTGAACACGAGGTTTCC +
Preference number: 2 (lower is better)
Translates to: ACPKPYTTMPLVFSV*LQDPIFLVIEHEVS
Trigger: GGAAACCTCGTGTTCAATGACTAAGAAGATGGGGTCCTGGAGCAAGACAGAAAACACTAAGGGCATGGTGGTATAAGGTTTGGGACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCAACTTGAAAACTGCCTaGTGGCCTTTTTGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPNLKTA*WPFCSG
Trigger: ACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTT...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTAATGTGTCCGCCCTCTTaGCCTTTACTCCCATTCCCA +
Preference number: 2 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLMCPPS*PLLPFP
Trigger: TGGGAATGGGAGTAAAGGGCAAGAGGGCGGACACAT...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCAAAGGAGGCTTGGTGTaGGGCTTTCATTTATTACTC +
Preference number: 2 (lower is better)
Translates to: QYIEPAVALSPILDQVDVKGGLV*GFHLLL
Trigger: GAGTAATAAATGAAAGCCCCACACCAAGCCTCCTTT...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGGCAGGCTGCACCCTCTaGCTAAATAACTCAGCATCA +
Preference number: 2 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQAGCTL*LNNSAS
Trigger: TGATGCTGAGTTATTTAGCCAGAGGGTGCAGCCTGC...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCAAGACCCAGGGGACTCTaGGGTCTCTATACTCTCTCT +
Preference number: 2 (lower is better)
Translates to: GRWAGYPSETEEILYAESRPRGL*GLYTLS
Trigger: AGAGAGAGTATAGAGACCCCAGAGTCCCCTGGGTCT...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp TCTAAGTGTCCCCCATATTTAATGCCCCAGCTCTCTAGAATCTGTAGAGGGAAGGCTAGTGACTTGAAATaGCAACCAGTCTCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: SKCPPYLMPQLSRICRGKASDLK*QPVSAC
Trigger: GCAGGCAGAGACTGGTTGCCATTTCAAGTCACTAGC...CTTCCCTCTACAGATTCTAGAGAGCTGGGGCATTAAATATGGGGGACACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCACCCTCCAGGAAGCCTTaGTCTCAGTTGAAGAAGTTC +
Preference number: 2 (lower is better)
Translates to: GRWAGYPSETEEILYAESPSRKP*SQLKKF
Trigger: GAACTTCTTCAACTGAGATCAAGGCTTCCTGGAGGG...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCAAAGGAACCCCATTGTaGAGGTTGCTGTGTGAATTA +
Preference number: 2 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPKGTPL*RLLCEL
Trigger: TAATTCACACAGCAACCTTCACAATGGGGTTCCTTT...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTAATAATTATACACTCTaGTTCCTTGTTCTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSNNYTL*FLVLPS
Trigger: AGAGGGGAGAACAAGGAAGCAGAGTGTATAATTATT...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCACTTGGCTGTGGCGGGTaGTGTCATTTCTCATTCCAT +
Preference number: 2 (lower is better)
Translates to: GRWAGYPSETEEILYAESLGCGG*CHFSFH
Trigger: ATGGAATGAGAAATGACAGCACCCGCCACAGCCAAG...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTTCATTATATAGATCCTaGATGTTGAGGGTTCTCTCT +
Preference number: 2 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSSLYRS*MLRVLS
Trigger: AGAGAGAACCCTCAACATCCAGGATCTATATAATGA...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGAGCCTTGATCTCAGTTaGAGAAGTTCTTTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQSLDLS*RSSFLA
Trigger: TGCCAGGAAAGAACTTCTTCAACTGAGATCAAGGCT...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTAAGTGCCCGTGGTAAGTaGTCAGAATTCATCTCTTGG +
Preference number: 2 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLSARGK*SEFISW
Trigger: CCAAGAGATGAATTCTGAGCACTTACCACGGGCACT...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCACATTTCTCATTCCATTaGGGGGAAGAAACTGAGGCA +
Preference number: 2 (lower is better)
Translates to: GRWAGYPSETEEILYAESHFSFH*GEETEA
Trigger: TGCCTCAGTTTCTTCCCCTCAATGGAATGAGAAATG...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACTCACCACTACTCTGGTaGCCTGGTTATCTGTCCCAC +
Preference number: 2 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNSPLLW*PGYLSH
Trigger: GTGGGACAGATAACCAGGGCACCAGAGTAGTGGTGA...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGATGGGTTGCTGAGCTGTaGCCCCCAAGTCCCTTCACT +
Preference number: 2 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRWVAEL*PPSPFT
Trigger: AGTGAAGGGACTTGGGGGGCACAGCTCAGCAACCCA...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTTATTTCCATGACAACTaGCTTCAATTCAAGCCATTT +
Preference number: 2 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKAYFHDN*LQFKPF
Trigger: AAATGGCTTGAATTGAAGCCAGTTGTCATGGAAATA...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGTCTTTGGGACTGTTTTaGCTCAAGCTTTTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQSLGLF*LKLFRE
Trigger: CTCTCTGAAAAGCTTGAGCCAAAACAGTCCCAAAGA...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACCTTCAGCCTCCTTACTaGTCCTTTCTTGACCTCTCC +
Preference number: 2 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNLQPPY*SFLDLS
Trigger: GGAGAGGTCAAGAAAGGAGCAGTAAGGAGGCTGAAG...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACGTACTTTCCCCTCCCTaGTGCCAGGTACTGTTAGAT +
Preference number: 2 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNVLSPP*CQVLLD
Trigger: ATCTAACAGTACCTGGCAGCAGGGAGGGGAAAGTAC...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACTTCATCTCTTGGCTGTaGCGGGTGCTGTCATTTCTC +
Preference number: 2 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNFISWL*RVLSFL
Trigger: GAGAAATGACAGCACCCGCCACAGCCAAGAGATGAA...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCTATGAAGTGGAACAGTaGATCTTTTGGAAGTTTTCT +
Preference number: 2 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPYEVEQ*IFWKFS
Trigger: AGAAAACTTCCAAAAGATCCACTGTTCCACTTCATA...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGAGTTCAGGAAGGGAGATaGGCTGGATATCCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRVQEGR*AGYPSE
Trigger: CTCTGAGGGATATCCAGCCCATCTCCCTTCCTGAAC...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGATGCTGTTCTCTTATATaGGGGCCTCTGGCAATGCCA +
Preference number: 2 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRCCSLI*GPLAMP
Trigger: TGGCATTGCCAGAGGCCCTCATATAAGAGAACAGCA...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGATGGCTCAGAAAAGGTTaGGTTAGGGTGATGATGGGT +
Preference number: 2 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRWLRKG*VRVMMG
Trigger: ACCCATCATCACCCTAACTCAACCTTTTCTGAGCCA...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACTCTTTGCCTTCTCACTaGTGCTCTTTTTGTTCCTCT +
Preference number: 2 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNSLPSH*CSFCSS
Trigger: AGAGGAACAAAAAGAGCAGCAGTGAGAAGGCAAAGA...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGTTCAAGCGATTCTTCTaGCTCAGCCTTCCATGTAGC +
Preference number: 2 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLFKRFF*LSLPCS
Trigger: GCTACATGGAAGGCTGAGGCAGAAGAATCGCTTGAA...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGATCCCATTCCCAACCCTaGAGGCTTTATACAAGTGCT +
Preference number: 2 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRSHSQP*RLYTSA
Trigger: AGCACTTGTATAAAGCCTCCAGGGTTGGGAATGGGA...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGACTGTGTTGCTCAGCTTaGAGTACAGTGGCTATTTAC +
Preference number: 2 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRLCCSA*STVAIY
Trigger: GTAAATAGCCACTGTACTCCAAGCTGAGCAACACAG...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGTATACTCTCTCTAATTaGCCTGAAGATAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLYTLSN*PEDRGW
Trigger: CCAGCCTCTATCTTCAGGTCAATTAGAGAGAGTATA...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGCCAGGATTCTCTTCTTaGAGCCTAATTATTCTCCTC +
Preference number: 2 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLPGFSS*SLIILL
Trigger: GAGGAGAATAATTAGGCTTCAAGAAGAGAATCCTGG...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGTTCAGGTTCAAGTGCTaGATTGTGTCATGTGACCAT +
Preference number: 2 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLFRFKC*IVSCDH
Trigger: ATGGTCACATGACACAATCCAGCACTTGAACCTGAA...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CCA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGAGGTCCCATGTTGCTGTaGTGTAATCCTTTATCCTTA +
Preference number: 2 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRGPMLL*CNPLSL
Trigger: TAAGGATAAAGGATTACACCACAGCAACATGGGACC...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR TCA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGACTCTTACTATTTCCATaGCAACTGGCTTCAATTCAA +
Preference number: 2 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRLLLFP*QLASIQ
Trigger: TTGAATTGAAGCCAGTTGTCATGGAAATAGTAAGAG...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR GCA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGAAATTTAGAAAAATTGTaGCTTGGAGAGCAGATCCAA +
Preference number: 2 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRNLEKL*LGEQIQ
Trigger: TTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATT...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp AGAGGGGCACTGGCCAGGTCCACACACATCATAAGGTaGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: RGALARSTHIIR*EGVLTPTGLLS
Trigger: GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGACCTGGCCAGTGCCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCCTCAGAATTCATCTCTaGGCTGTGGCGGGTGCTGTC +
Preference number: 3 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSLRIHL*AVAGAV
Trigger: GACAGCACCCGCCACAGCCAAGAGATGAATTCTGAG...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 72 bp CCTGCTTCTACGCCACTACAGACCAGAAGCTGTAGATaGCACTGCCTGCTGATTCTTAGCTTGGGGCCCCTG +
Preference number: 3 (lower is better)
Translates to: PASTPLQTRSCR*HCLLILSLGPL
Trigger: CAGGGGCCCCAAGCTAAGAATCAGCAGGCAGTGGCATCTACAGCTTCTGGTCTGTAGTGGCGTAGAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTATGGCCGGGTGTGTCTaGTCCTTCAGGATTGGGGCA +
Preference number: 3 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSMAGCV*SFRIGA
Trigger: TGCCCCAATCCTGAAGGACAAGACACACCCGGCCAT...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp AAGGATAGGGTGTGGATCAGGAGATTCTCAACTCCTTaGCTTCTAGGCACTGTCCAGCTGGGAGGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: KDRVWIRRFSTP*LLGTVQLGGRG
Trigger: CCCTCTGCCTCCCAGCTGGACAGTGCCTAGAAGCCAAGGAGTTGAGAATCTCCTGATCCACACCCTATCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp CAAGGGTGGTCACATACCTTTGCCCCTTCCACCAACTaGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATG +
Preference number: 3 (lower is better)
Translates to: QGWSHTFAPSTN*PRGRVMLLGRM
Trigger: CATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCAAAGGTATGTGACCACCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGAGGCAGAGGGGAACTaGTACTCTGAAGCCTGTGAC +
Preference number: 3 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSEAEGN*YSEACD
Trigger: GTCACAGGCTTCAGAGTACAAGTTCCCCTCTGCCTC...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp TGTCCCCCTTCCAGAATCCTTCCCACCTTGGTCTGCTaGCTCTATTCCCTAGCCCAGAGCAGTGATTTGGAT +
Preference number: 3 (lower is better)
Translates to: CPPSRILPTLVC*LYSLAQSSDLD
Trigger: ATCCAAATCACTGCTCTGGGCTAGGGAATAGAGCCAGCAGACCAAGGTGGGAAGGATTCTGGAAGGGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGTCTTTGGTCTCTCTCTaGGCTGAGGGAATTTGGGCA +
Preference number: 3 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRSLVSL*AEGIWA
Trigger: TGCCCAAATTCCCTCAGCCAAGAGAGAGACCAAAGA...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCACATCCTCTAAGCTCTaGCCTGGAGCCAAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: QYIEPAVALSPILDQVDVTSSKL*PGAKRP
Trigger: AGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGT...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 72 bp AAATGTCCCCCTTCCAGAATCCTTCCCACCTTGGTCTaGTGGCTCTATTCCCTAGCCCAGAGCAGTGATTTG +
Preference number: 3 (lower is better)
Translates to: KCPPSRILPTLV*WLYSLAQSSDL
Trigger: CAAATCACTGCTCTGGGCTAGGGAATAGAGCCAGCAGACCAAGGTGGGAAGGATTCTGGAAGGGGGACATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCGGGAGAGTCATGCTCTaGGGAAGAATGAGCCATCCA +
Preference number: 3 (lower is better)
Translates to: QYIEPAVALSPILDQVDVGRVML*GRMSHP
Trigger: TGGATGGCTCATTCTTCCCAAGAGCATGACTCTCCC...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGCATGTGTCCGCCCTCTaGCCCTTTACTCCCATTCCC +
Preference number: 3 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQHVSAL*PFTPIP
Trigger: GGGAATGGGAGTAAAGGGCAAGAGGGCGGACACATG...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp CTTGGTCTGCTGGCTCTATTCCCTAGCCCAGAGCAGTaGTTTGGATTCAAATGCCCTGTAACCTTCAGCCTC +
Preference number: 3 (lower is better)
Translates to: LGLLALFPSPEQ*FGFKCPVTFSL
Trigger: GAGGCTGAAGGTTACAGGGCATTTGAATCCAAATCACTGCTCTGGGCTAGGGAATAGAGCCAGCAGACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp GTGCTGTCATTTCTCATTCCATTGAGGGGAAGAAACTaGGGCACAGTGAGTCCAGAGGAGAATGGGTCAGGG +
Preference number: 3 (lower is better)
Translates to: VLSFLIPLRGRN*GTVSPEENGSG
Trigger: CCCTGACCCATTCTCCTCTGGACTCACTGTGCCTCAGTTTCTTCCCCTCAATGGAATGAGAAATGACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp CGTCTTTGCCCTCTGTCACATAACTTGAAAACTGCCTaGTGGCCTTTTTGCAGTGGTTCCCTCCAGGAAGCC +
Preference number: 3 (lower is better)
Translates to: RLCPLSHNLKTA*WPFCSGSLQEA
Trigger: GGCTTCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTATGTGACAGAGGGCAAAGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp CACCCTATGGCCGTCTTTGCCCTCTGTCACATAACTTaGAAACTGCCTGATGGCCTTTTTGCAGTGGTTCCC +
Preference number: 3 (lower is better)
Translates to: HPMAVFALCHIT*KLPDGLFAVVP
Trigger: GGGAACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTTATGTGACAGAGGGCAAAGACGGCCATAGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 72 bp GGAAGATACCTGATGCTTATTGCCCAATCCCTACTCTaGCAAGATCACGAGGCATTTGACCTTGGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: GRYLMLIAQSLL*QDHEAFDLGGR
Trigger: CCTCCCTCCAAGGTCAAATGCCTCGTGATCTTGGCAGAGTAGGGATTGGGCAATAAGCATCAGGTATCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTAGGTGGTCACATACCTTaGCCCCTTCCACCAACTGGC +
Preference number: 3 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLGGHIP*PLPPTG
Trigger: GCCAGTTGGTGGAAGGGGCAAAGGTATGTGACCACC...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCACGAGGCATTTGACCTaGGAGGGAGGTATCTGTTCT +
Preference number: 3 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPTRHLT*EGGICS
Trigger: AGAACAGATACCTCCCTCCAAGGTCAAATGCCTCGT...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp TGCCCAATCCCTACTCTGCCAAGATCACGAGGCATTTaGCCTTGGAGGGAGGTATCTGTTCTTCACTTCTCT +
Preference number: 3 (lower is better)
Translates to: CPIPTLPRSRGI*PWREVSVLHFS
Trigger: AGAGAAGTGAAGAACAGATACCTCCCTCCAAGGTCAAATGCCTCGTGATCTTGGCAGAGTAGGGATTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp TTGCAGTGGTTCCCTCCAGGAAGCCTTGATCTCAGTTaGAGAAGTTCTTTCCTGGCATTCCAATGCCCCTGT +
Preference number: 3 (lower is better)
Translates to: LQWFPPGSLDLS*RSSFLAFQCPC
Trigger: ACAGGGGCATTGGAATGCCAGGAAAGAACTTCTTCAACTGAGATCAAGGCTTCCTGGAGGGAACCACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp GCTTCTGTGAGGATGAGGGCTATAGGAAGGAAGGTGTaGATAAGGGCAGGACTTCTTGGTGTTGAGCTGAGT +
Preference number: 3 (lower is better)
Translates to: ASVRMRAIGRKV*IRAGLLGVELS
Trigger: ACTCAGCTCAACACCAAGAAGTCCTGCCCTTATTCACACCTTCCTTCCTATAGCCCTCATCCTCACAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp CAAGCCCCTCACCTTGCCAGTGGAAGAAAGGAGGCTTaGTGTGGGGCTTTCATTTATTACTCCATTTCAGTC +
Preference number: 3 (lower is better)
Translates to: QAPHLASGRKEA*CGAFIYYSISV
Trigger: GACTGAAATGGAGTAATAAATGAAAGCCCCACACCAAGCCTCCTTTCTTCCACTGGCAAGGTGAGGGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp CAGGAAGCCTTGATCTCAGTTGAAGAAGTTCTTTCCTaGCATTCCAATGCCCCTGTCAGCTCCATACTCCTC +
Preference number: 3 (lower is better)
Translates to: QEALISVEEVLS*HSNAPVSSILL
Trigger: GAGGAGTATGGAGCTGACAGGGGCATTGGAATGCCAGGAAAGAACTTCTTCAACTGAGATCAAGGCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp CAGTGTGCTGATAGAACTGATAAGACAGGGAAAACATaGCAGTACATTGAACCCGCAGTAGCGCTGTCCCCA +
Preference number: 3 (lower is better)
Translates to: QCADRTDKTGKT*QYIEPAVALSP
Trigger: TGGGGACAGCGCTACTGCGGGTTCAATGTACTGCCATGTTTTCCCTGTCTTATCAGTTCTATCAGCACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp ACCACTTCCAGCCTTAGTCTTGTAGTTGGTCTCGAGTaGGGTCAGTGTGCTGATAGAACTGATAAGACAGGG +
Preference number: 3 (lower is better)
Translates to: TTSSLSLVVGLE*GQCADRTDKTG
Trigger: CCCTGTCTTATCAGTTCTATCAGCACACTGACCCCACTCGAGACCAACTACAAGACTAAGGCTGGAAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp CCAGCTCACTGGCAGGAAAGCTGGACATTGTTGCTTTaGAGCATTGATTTTCCTGCTTCTACGCCACTACAG +
Preference number: 3 (lower is better)
Translates to: PAHWQESWTLLL*SIDFPASTPLQ
Trigger: CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAGTGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp TTCACTCCCTCAAGCCCAGCTCACTGGCAGGAAAGCTaGACATTGTTGCTTTGGAGCATTGATTTTCCTGCT +
Preference number: 3 (lower is better)
Translates to: FTPSSPAHWQES*TLLLWSIDFPA
Trigger: AGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAGTGAGCTGGGCTTGAGGGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp TTCTGTCTTGCTCCAGGACCCCATCTTCTTAGTCATTaGACACGAGGTTTCCTGTCTCAGATCCTCTTCACC +
Preference number: 3 (lower is better)
Translates to: FCLAPGPHLLSH*TRGFLSQILFT
Trigger: GGTGAAGAGGATCTGAGACAGGAAACCTCGTGTTCAATGACTAAGAAGATGGGGTCCTGGAGCAAGACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp CTGGCAGGAAAGCTGGACATTGTTGCTTTGGAGCATTaGTTTTCCTGCTTCTACGCCACTACAGACCAGAAG +
Preference number: 3 (lower is better)
Translates to: LAGKLDIVALEH*FSCFYATTDQK
Trigger: CTTCTGGTCTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTACATTCCAGAGGCTCTTaGGTCTCTCTCTTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLHSRGS*VSLLAE
Trigger: CTCAGCCAAGAGAGAGACCAAAGAGCCTCTGGAATG...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGGGCCTAGCTAGTGACTaGAAATGGCAACCAGTCTCT +
Preference number: 3 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQGLASD*KWQPVS
Trigger: AGAGACTGGTTGCCATTTCAAGTCACTAGCTAGGCC...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp TCTAAGTGTCCCCCATATTTAATGCCCCAGCTCTCTAGAATCTGTAGAGGGAAGAAGATCACGAGGCATTaGACCTTGGAGGGAGGTATC +
Preference number: 3 (lower is better)
Translates to: SKCPPYLMPQLSRICRGKKITRH*TLEGGI
Trigger: GATACCTCCCTCCAAGGTCAAATGCCTCGTGATCTT...CTTCCCTCTACAGATTCTAGAGAGCTGGGGCATTAAATATGGGGGACACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGTGGAAGAAAGGAGGCTaGGTGTGGGGCTTTCATTTA +
Preference number: 3 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQWKKGG*VWGFHL
Trigger: TAAATGAAAGCCCCACACCAAGCCTCCTTTCTTCCA...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCAGGTTCAAGTGCTGGATaGTGTCATGTGACCATCCCA +
Preference number: 3 (lower is better)
Translates to: GRWAGYPSETEEILYAESGSSAG*CHVTIP
Trigger: TGGGATGGTCACATGACACAATCCAGCACTTGAACC...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp CCCTCACCTTGCCAGTGGAAGAAAGGAGGCTTGGTGTaGGGCTTTCATTTATTACTCCATTTCAGTCTCTTT +
Preference number: 3 (lower is better)
Translates to: PSPCQWKKGGLV*GFHLLLHFSLF
Trigger: AAAGAGACTGAAATGGAGTAATAAATGAAAGCCCCACACCAAGCCTCCTTTCTTCCACTGGCAAGGTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACTGTATTGCACACGGCTaGGTCGGGGAACGGTGTGAT +
Preference number: 3 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNCIAHG*VGERCD
Trigger: ATCACACCGTTCCCCGACCAAGCCGTGTGCAATACA...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGCCTCCCTCTGTTGTATaGCACACGGCTTGGTCGGGG +
Preference number: 3 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLPPSVV*HTAWSG
Trigger: CCCCGACCAAGCCGTGTGCAATACAACAGAGGGAGG...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCTTCAATTCAAGCCATTaGGCTCAGAAAAGGTTGAGT +
Preference number: 3 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPFNSSH*AQKRLS
Trigger: ACTCAACCTTTTCTGAGCCAAATGGCTTGAATTGAA...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTACTTACTGCTCCTTTCTaGACCTCTCCTAACGCTTTC +
Preference number: 3 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLLTAPF*TSPNAF
Trigger: GAAAGCGTTAGGAGAGGTCAAGAAAGGAGCAGTAAG...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp TCCAGCATCCAGATGTGGTTAACTGATTCCAATTCCTaGAGCTGTGACATTCTCTGCATACCTGGAAGCTCT +
Preference number: 3 (lower is better)
Translates to: SSIQMWLTDSNS*SCDILCIPGSS
Trigger: AGAGCTTCCAGGTATGCAGAGAATGTCACAGCTTCAGGAATTGGAATCAGTTAACCACATCTGGATGCTGGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp AACTGCTGCCCATTTGTTGTGAAGTTTGCCCCATTCTaGGACTTTGGAGAAGTGAACAAAAGGGAATGCTGG +
Preference number: 3 (lower is better)
Translates to: NCCPFVVKFAPF*DFGEVNKRECW
Trigger: CCAGCATTCCCTTTTGTTCACTTCTCCAAAGTCTCAGAATGGGGCAAACTTCACAACAAATGGGCAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 72 bp TCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTaGCCAATCCCTACTCTGCCAAGATCACGAGGCATT +
Preference number: 3 (lower is better)
Translates to: SRICRGKIPDAY*PIPTLPRSRGI
Trigger: AATGCCTCGTGATCTTGGCAGAGTAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp CTATGTTGGTCAGTCAGTTCAGGAAGGGAGATGGGCTaGATATCCCTCAGAGACAGAAGAAATTTTGTATGC +
Preference number: 3 (lower is better)
Translates to: LCWSVSSGREMG*ISLRDRRNFVC
Trigger: GCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCCTTCCTGAACTGACTGACCAACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCACTTAGAGTGACAGTTTaGCTGAAGATTCTTACCCCC +
Preference number: 3 (lower is better)
Translates to: GRWAGYPSETEEILYAESLRVTV*LKILTP
Trigger: GGGGGTAAGAATCTTCAGCAAAACTGTCACTCTAAG...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACTCTTTCCATCCTTCCTaGGCCTGCATGTCCCAAACC +
Preference number: 3 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNSFHPS*ACMSQT
Trigger: GGTTTGGGACATGCAGGCCAAGGAAGGATGGAAAGA...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp CCCCAGCTCTTAAACCCTAACCTCTTACTATTTCCATaGCAACTGGCTTCAATTCAAGCCATTTGGCTCAGA +
Preference number: 3 (lower is better)
Translates to: PQLLNPNLLLFP*QLASIQAIWLR
Trigger: TCTGAGCCAAATGGCTTGAATTGAAGCCAGTTGTCATGGAAATAGTAAGAGGTTAGGGTTTAAGAGCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 72 bp CAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTaGCCCATTCTGAGACTTTGGAGAAGTGAACAAAAG +
Preference number: 3 (lower is better)
Translates to: QIQKLLPICCEV*PILRLWRSEQK
Trigger: CTTTTGTTCACTTCTCCAAAGTCTCAGAATGGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCATTCTCCACATACTCTTaGAGCATGAATAGTTCAGGA +
Preference number: 3 (lower is better)
Translates to: GRWAGYPSETEEILYAESFSTYS*SMNSSG
Trigger: TCCTGAACTATTCATGCTCAAAGAGTATGTGGAGAA...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGATATAGATCCTGGATGTaGAGGGTTCTCTCTCCCACC +
Preference number: 3 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRYRSWM*RVLSPT
Trigger: GGTGGGAGAGAGAACCCTCAACATCCAGGATCTATA...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGCATATTCCTGGGGAATaGTGCTCTAGGTACATGGGA +
Preference number: 3 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLHIPGE*CSRYMG
Trigger: TCCCATGTACCTAGAGCACAATTCCCCAGGAATATG...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp CCTTTATCCCTTAGAAGAGAAGACAAGGAAAAGGACTaGGTTTACCCTTTAAGCCTGTTTATTCCCTTCTGT +
Preference number: 3 (lower is better)
Translates to: PLSLRREDKEKD*VYPLSLFIPFC
Trigger: ACAGAAGGGAATAAACAGGCTTAAAGGGTAAACTCAGTCCTTTTCCTTGTCTTCTCTTCTAAGGGATAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp CACTCTTGTGTAACAAGGCAAGTTCGTTGGCTATGTTaGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACC +
Preference number: 3 (lower is better)
Translates to: HSCVTRQVRWLC*FRFLSNFVEET
Trigger: GGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAACGAACTTGCCTTGTTACACAAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR TCA 72 bp AAAGATATTCAGCCTTACTTGCCAGGATTCTCTTCTTaGAGCCTAATTATTCTCCTCACTCATCTTACTTCC +
Preference number: 3 (lower is better)
Translates to: KDIQPYLPGFSS*SLIILLTHLTS
Trigger: GGAAGTAAGATGAGTGAGGAGAATAATTAGGCTTCAAGAAGAGAATCCTGGCAAGTAAGGCTGAATATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR GCA 72 bp TTAATTTCTTATTCTACCACACTAGCTCTGAGACCCTaGGCAGATAATCATTCTCTTTTCAGACTGTACCAA +
Preference number: 3 (lower is better)
Translates to: LISYSTTLALRP*ADNHSLFRLYQ
Trigger: TTGGTACAGTCTGAAAAGAGAATGATTATCTGCGCAGGGTCTCAGAGCTAGTGTGGTAGAATAAGAAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR-3UTR CAA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGCATCTCTCTGTCTTTTaGTCAAACCTTCTCATCTGC +
Preference number: 3 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLHLSVF*SNLLIC
Trigger: GCAGATGAGAAGGTTTGACAAAAAGACAGAGAGATG...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CCA 72 bp TATTTTAGCCACTCTTGTGTAACAAGGCAAGTTCGTTaGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTT +
Preference number: 3 (lower is better)
Translates to: YFSHSCVTRQVR*LCWFRFLSNFV
Trigger: AACGAAGTTTGACAAAAATCTAAACCAACATAGCCAACGAACTTGCCTTGTTACACAAGAGTGGCTAAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTGGGCCGCGAGCACCATaGTGGAGGGGAGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKAGPRAP*WRGGEG
Trigger: TCCCTCCCCTCCCCTCCAGCATGGTGCTCGCGGCCC...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGAGGAAGTCCTCGGGCTaGAGCGCGTCGCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRRKSSG*SASPWK
Trigger: CTTCCAGGGCGACGCGCTGCAGCCCGAGGACTTCCT...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GTCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGGTCTCGGTGGTGGCGTaGTACTCGTCCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VHTHHKVGGGANSHWVAEVSVVA*YSSSSR
Trigger: CCTGGAGGAGGACGAGTACCACGCCACCACCGAGAC...CTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGCGGGACTCGCTTGAGTaGTCGTCGCAGTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRRDSLE*SSQSRP
Trigger: GGGTCTGGACTGCGACGAGCACTCAAGCGAGTCCCG...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGAGCGGATACGGATGTaGCGCCGGCCTCCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSERIRM*RRPPPP
Trigger: AGGGGGCGGAGGCCGGCGTCACATCCGTATCCGCTC...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTAGCTCGCGGCTGTGCTaGCGCCAAACGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLSSRLC*RQTHTG
Trigger: CCCCGTGTGCGTTTGGCGGCAGCACAGCCGCGAGCT...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGAGCTCGCGGCTGTGCTaGCGCCAAACGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVSSRLC*RQTHTG
Trigger: CCCCGTGTGCGTTTGGCGGCAGCACAGCCGCGAGCT...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTCGCAGCTCGCGGCTGTaGTGCCGCCAAACGCACACG +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLRSSRL*CRQTHT
Trigger: CGTGTGCGTTTGGCGGCAGCACAGCCGCGAGCTGCG...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCGCAGCTCGCGGCTGTaGTGCCGCCAAACGCACACG +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTRSSRL*CRQTHT
Trigger: CGTGTGCGTTTGGCGGCAGCACAGCCGCGAGCTGCG...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCAGGTCCAGGATCTGCTaGAGCGGCGGCGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTRSRIC*SGGALG
Trigger: GCCCAAGGCGCCGCCGCTGCAGCAGATCCTGGACCT...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAAGGAAGTCCTCGGGCTaGAGCGCGTCGCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPRKSSG*SASPWK
Trigger: CTTCCAGGGCGACGCGCTGCAGCCCGAGGACTTCCT...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp TGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATGAGGGCAGCAGAGAGGGCTaGCATCTGTCTGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: CPFHQLAKGESHALGKNEGSREG*HLSVLL
Trigger: CAGCAGTACAGACAGATGGCAGCCCTCTCTGCTGCC...CTCATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCGCAGCGGCGGCGCCTTaGGCAGCAGCTGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPAAAAP*AAAASP
Trigger: TGGTGAAGCAGCTGCTGCCCAAGGCGCCGCCGCTGC...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCGCAGCGGCGGCGCCTTaGGCAGCAGCTGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTAAAAP*AAAASP
Trigger: TGGTGAAGCAGCTGCTGCCCAAGGCGCCGCCGCTGC...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp GTCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCCCACCTTGGTCTGCTaGCTCTATTCCCTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VHTHHKVGGGANSHWVAEPTLVC*LYSLAQ
Trigger: CTGGGCTAGGGAATAGAGCCAGCAGACCAAGGTGGG...CTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTGCAGCGGGACTCGCTTaGGTGCTCGTCGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAAAGLA*VLVAVQ
Trigger: CTGGACTGCGACGAGCACTCAAGCGAGTCCCGCTGC...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTGCCTTGGGCAGCAGCTaGTTCACCACCTCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAALGSS*FTTSRL
Trigger: CAGCCGCGAGGTGGTGAAGCAGCTGCTGCCCAAGGC...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTTCTCGATGCCCCAGTTaGTCTGTGGCTGGCGGAACC +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSSRCPS*SVAGGT
Trigger: GGTTCCGCCAGCCACAGAGCAACTGGGGCATCGAGA...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GTCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGAGCGATCCACCACCATaGCAGGGATCTTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: VHTHHKVGGGANSHWVAESDPPP*QGSCRR
Trigger: TCTACGGCAAGATCCCTGGCATGGTGGTGGATCGCT...CTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATGAGAGTCCCTTCACTCTGTaGCTCTTTGGGGGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: CPFHQLAKGESHALGKNESPFTL*LFGGRE
Trigger: CTCCCTACCCCCAAAGAGGCACAGAGTGAAGGGACT...CTCATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCATGCAGCGCGTCGCCCTaGAAGTCGTGTAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPCSASP*KSCRSR
Trigger: CCTGGACCTACACGACTTCCAGGGCGACGCGCTGCA...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAGCCCCAGTTGCTCTGTaGCTGGCGGAACCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPAPVAL*LAEPAV
Trigger: CACAGCTGGTTCCGCCAGCCACAGAGCAACTGGGGC...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp TGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATGAGCCATTCTGTGGAGGCTaGGAGAGGGGTCTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: CPFHQLAKGESHALGKNEPFCGG*ERGLVV
Trigger: GACAACAAGACCCCTCTCCCAGCCTCCACAGAATGG...CTCATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAGGACTCGAAGCTCCATaGATGGATGCAGCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPGLEAP*MDAAPR
Trigger: CCGAGGGGCTGCATCCATTCATGGAGCTTCGAGTCC...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR TCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTCCTCAAAGTCCACTGTaGGGGGATATCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSPQSPL*GDIGSS
Trigger: GCTGCTGCCGATATCCCCTCACAGTGGACTTTGAGG...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTGGTCGGGGAACGGTGTaGTGTTCGCGGGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLGRGTV*CSREEW
Trigger: CCACTCTTCCCGCGAACATCACACCGTTCCCCGACC...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCATAGATCCTGGATGTTaGGGGTTCTCTCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSIDPGC*GFSLPP
Trigger: GGGTGGGAGAGAGAACCCTCAACATCCAGGATCTAT...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GTCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGTTGAGGGGAAGAAACTaGGGCACAGTGAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VHTHHKVGGGANSHWVAELRGRN*GTVSPE
Trigger: CTCTGGACTCACTGTGCCTCAGTTTCTTCCCCTCAA...CTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAGATGCCACTGCCTGCTaGTTCTTAGCTTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPDATAC*FLAWGP
Trigger: GGGGCCCCAAGCTAAGAATCAGCAGGCAGTGGCATC...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGGTCCAGGATCTaGTGCAGCGGCGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAACRSRI*CSGGAL
Trigger: CAAGGCGCCGCCGCTGCAGCAGATCCTGGACCTACA...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGAGCTCCATGAATGGATaGAGCCCCTCGGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVSSMNG*SPSAPG
Trigger: GCCGGGAGCCGAGGGGCTGCATCCATTCATGGAGCT...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCCTTGGATTGGCCTGCTaGACCAAATGGGTATGCGGA +
Preference number: 4 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSLGLAC*TKWVCG
Trigger: TCCGCATACCCATTTGGTGCAGCAGGCCAATCCAAG...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCCCTCTTGGATTGGCCTaGTGCACCAAATGGGTATGC +
Preference number: 4 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSPLGLA*CTKWVC
Trigger: GCATACCCATTTGGTGCAGCAGGCCAATCCAAGAGG...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCTGCAGCGCGTCGCCCTaGAAGTCGTGTAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPCSASP*KSCRSR
Trigger: CCTGGACCTACACGACTTCCAGGGCGACGCGCTGCA...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAGCTGGGTCCGTCTCCTaGGCCATGCTAATGACGGTC +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPAGSVS*AMLMTV
Trigger: GACCGTCATTAGCATGGCCCAGGAGACGGACCCAGC...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTCAGTTGCTCTGTGGCTaGCGGAACCAGCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSQLLCG*RNQLCS
Trigger: GCTACACAGCTGGTTCCGCCAGCCACAGAGCAACTG...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAGGTGCTAACTCCCACTaGGTTGCTGAGCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPGANSH*VAELCP
Trigger: GGGGCACAGCTCAGCAACCCAGTGGGAGTTAGCACC...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTCCCTCTGGCCTCAAGTaGTCCTCCTGCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLPSGLK*SSCHSL
Trigger: GAGGCTGTGGCAGGAGGACCACTTGAGGCCAGAGGG...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 72 bp CACCAACATCACCTTCTCAAGGGTGGTCACATACCTTaGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: HQHHLLKGGHIP*PLPPTGQGGES
Trigger: TGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCAAAGGTATGTGACCACCCTTGAGAAGGTGATGTTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCATGTTGGGCGCCTCCTTaGGCCGCAGTTTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPCWAPP*AAVCSR
Trigger: TCTTGAGCAAACTGCGGCTCAAGGAGGCGCCCAACA...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR TCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCGGACTCGAAGCTCCATaGATGGATGCAGCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPGLEAP*MDAAPR
Trigger: CCGAGGGGCTGCATCCATTCATGGAGCTTCGAGTCC...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGGCAGCGGGACTCGCTTaGGTGCTCGTCGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQAAGLA*VLVAVQ
Trigger: CTGGACTGCGACGAGCACTCAAGCGAGTCCCGCTGC...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGGGTTGTGGGAGGAATaGATGGGCCTAGCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSGLWEE*MGLASD
Trigger: GTCACTAGCTAGGCCCATTCATTCCTCCCACAACCC...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTCGGGACTCGCTTGAGTaGTCGTCGCAGTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSRDSLE*SSQSRP
Trigger: GGGTCTGGACTGCGACGAGCACTCAAGCGAGTCCCG...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTCTTCCCACCTTGGTCTaGTGGCTCTATTCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSLPTLV*WLYSLA
Trigger: GGCTAGGGAATAGAGCCAGCAGACCAAGGTGGGAAG...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGTGGTCACATACCTTTaGCCCTTCCACCAACTGGCC +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSVVTYL*PFHQLA
Trigger: GGCCAGTTGGTGGAAGGGGCAAAGGTATGTGACCAC...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GTCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCCCTATGGCCGTCTTTaGCCTCTGTCACATAACTTG +
Preference number: 4 (lower is better)
Translates to: VHTHHKVGGGANSHWVAEPYGRL*PLSHNL
Trigger: CAAGTTATGTGACAGAGGGCAAAGACGGCCATAGGG...CTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGGCTGGGTCCGTCTCCTaGGCCATGCTAATGACGGTC +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVAGSVS*AMLMTV
Trigger: GACCGTCATTAGCATGGCCCAGGAGACGGACCCAGC...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGCCCCAGTTGCTCTGTaGCTGGCGGAACCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSAPVAL*LAEPAV
Trigger: CACAGCTGGTTCCGCCAGCCACAGAGCAACTGGGGC...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp TGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATGAGTTCATCTCTTGGCTGTaGCGGGTGCTGTCATTTCTC +
Preference number: 4 (lower is better)
Translates to: CPFHQLAKGESHALGKNEFISWL*RVLSFL
Trigger: GAGAAATGACAGCACCCGCCACAGCCAAGAGATGAA...CTCATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCTCAGAATTCATCTCTTaGCTGTGGCGGGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSSEFIS*LWRVLS
Trigger: TGACAGCACCCGCCACAGCCAAGAGATGAATTCTGA...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGGCCCCTTCCACCAACTaGCCAAGGGGGAGAGTCATG +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVAPSTN*PRGRVM
Trigger: CATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGC...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGGTTCAGGAAGGGAGATaGGCTGGATATCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRVQEGR*AGYPSE
Trigger: CTCTGAGGGATATCCAGCCCATCTCCCTTCCTGAAC...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCGCGGATATTTTTGCATaGACATGTACTCGCACTGGC +
Preference number: 4 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSADIFA*TCTRTG
Trigger: GCCAGTGCGAGTACATGTTCATGCAAAAATATCCGC...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGGTCTCTCTCTTGGCTaGGGGAATTTGGGCATAAGC +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSGLSLG*GNLGIS
Trigger: GCTTATGCCCAAATTCCCTCAGCCAAGAGAGAGACC...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCAGCCTTGGGCAGCAGCTaGTTCACCACCTCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GRWAGYPSETEEILYAESALGSS*FTTSRL
Trigger: CAGCCGCGAGGTGGTGAAGCAGCTGCTGCCCAAGGC...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGTGTAGGTCCAGGATCTaGTGCAGCGGCGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQCRSRI*CSGGAL
Trigger: CAAGGCGCCGCCGCTGCAGCAGATCCTGGACCTACA...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGCCATCTGTCTGTACTaGTGGGTCCGTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSAICLY*WVRLLG
Trigger: GCCCAGGAGACGGACCCAGCAGTACAGACAGATGGC...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCGGCAGCAGAGAGGGCTaGCATCTGTCTGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTGSREG*HLSVLL
Trigger: CAGCAGTACAGACAGATGGCAGCCCTCTCTGCTGCC...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTTCTCGATGCCCCAGTTaGTCTGTGGCTGGCGGAACC +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSSRCPS*SVAGGT
Trigger: GGTTCCGCCAGCCACAGAGCAACTGGGGCATCGAGA...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAAGCGATCCACCACCATaGCAGGGATCTTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPSDPPP*QGSCRR
Trigger: TCTACGGCAAGATCCCTGGCATGGTGGTGGATCGCT...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTCCAAGCCCCTCACCTTaGCAGTGGAAGAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAPSPSP*QWKKGG
Trigger: GCCTCCTTTCTTCCACTGGCAAGGTGAGGGGCTTGG...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCACATCCTCTAAGCTCTTaGCTGGAGCCAAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPHPLSS*LEPRGL
Trigger: CAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATG...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATGAGAGCTGTAGATGCCACTaGCTGCTGATTCTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: CPFHQLAKGESHALGKNESCRCH*LLILSL
Trigger: CAAGCTAAGAATCAGCAGGCAGTGGCATCTACAGCT...CTCATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTAGGTACACCCACAGCTaGGCCTTCAGTACCTTTGTG +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSRYTHS*AFSTFV
Trigger: CACAAAGGTACTGAAGGCCCAGCTGTGGGTGTACCT...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCTCGATGCTCTGCCAATaGCCTGAGCGTGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPSMLCQ*PERECS
Trigger: GCTGCACTCACGCTCAGGCCATTGGCAGAGCATCGA...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTCGATGCTCTGCCAATaGCCTGAGCGTGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAASMLCQ*PERECS
Trigger: GCTGCACTCACGCTCAGGCCATTGGCAGAGCATCGA...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTCGAAGCTCCATGAATaGATGCAGCCCCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAASKLHE*MQPLGS
Trigger: GGAGCCGAGGGGCTGCATCCATTCATGGAGCTTCGA...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp TGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATGAGCTTTGGTCTCTCTCTTaGCTGAGGGAATTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: CPFHQLAKGESHALGKNELWSLS*LREFGH
Trigger: ATGCCCAAATTCCCTCAGCCAAGAGAGAGACCAAAG...CTCATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCATGTTGGGCGCCTCCTTaGGCCGCAGTTTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPCWAPP*AAVCSR
Trigger: TCTTGAGCAAACTGCGGCTCAAGGAGGCGCCCAACA...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCTGGGATCAAAGGCGTTaGTCTCGATGCCCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPWDQRR*SRCPSC
Trigger: GCAACTGGGGCATCGAGATCAACGCCTTTGATCCCA...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCTGGGATCAAAGGCGTTaGTCTCGATGCCCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTWDQRR*SRCPSC
Trigger: GCAACTGGGGCATCGAGATCAACGCCTTTGATCCCA...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR TCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTCCTCAAAGTCCACTGTaGGGGGATATCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSPQSPL*GDIGSS
Trigger: GCTGCTGCCGATATCCCCTCACAGTGGACTTTGAGG...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR TCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGAAACACTCCCCACCCTaGCTATGCCCCTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQKHSPP*LCPCFP
Trigger: GGGGAAGCAGGGGCATAGTCAGGGTGGGGAGTGTTT...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTCAAGAGGCCTGGTGGTaGAGTAAGGATAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLQEAWW*SKDRVW
Trigger: CCACACCCTATCCTTACTTCACCACCAGGCCTCTTG...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCTCCACCAAGGAAATGTaGGTGGTGTTGATGGCCGGG +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTSTKEM*VVLMAG
Trigger: CCCGGCCATCAACACCACTCACATTTCCTTGGTGGA...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp TGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATGAGGAGACTTTGGAGAAGTaGACAAAAGGGAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: CPFHQLAKGESHALGKNEETLEK*TKGNAG
Trigger: ACCAGCATTCCCTTTTGTTCACTTCTCCAAAGTCTC...CTCATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TCTAAGTGTCCCCCATATTTAATGCCCCAGCTCTCTAGAATCTGTAGAGGGAAGGCCATCTGTCTGTACTaGTGGGTCCGTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SKCPPYLMPQLSRICRGKAICLY*WVRLLG
Trigger: GCCCAGGAGACGGACCCAGCAGTACAGACAGATGGC...CTTCCCTCTACAGATTCTAGAGAGCTGGGGCATTAAATATGGGGGACACTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCATTGAAGTCGATGCTCTaGCAATGGCCTGAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPLKSML*QWPERE
Trigger: CTCACGCTCAGGCCATTGGCAGAGCATCGACTTCAA...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCATCACCACTACTCTGGTaGCCTGGTTATCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPSPLLW*PGYLSH
Trigger: GTGGGACAGATAACCAGGGCACCAGAGTAGTGGTGA...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCTCAAGTGGTCCTCCTaGCACAGCCTCCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTLKWSS*HSLLNS
Trigger: GCTATTCAGGAGGCTGTGGCAGGAGGACCACTTGAG...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTATCTGTCTGTACTGCTaGGTCCGTCTCCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAICLYC*VRLLGH
Trigger: ATGGCCCAGGAGACGGACCCAGCAGTACAGACAGAT...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTCAGTTGCTCTGTGGCTaGCGGAACCAGCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSQLLCG*RNQLCS
Trigger: GCTACACAGCTGGTTCCGCCAGCCACAGAGCAACTG...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTTCGAAGCTCCATGAATaGATGCAGCCCCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSSKLHE*MQPLGS
Trigger: GGAGCCGAGGGGCTGCATCCATTCATGGAGCTTCGA...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGTCCCATTCCCAACCCTaGAGGCTTTATACAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRSHSQP*RLYTSA
Trigger: AGCACTTGTATAAAGCCTCCAGGGTTGGGAATGGGA...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCCTGAAGATAGAGGCTaGGAGCAGGGCCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTPEDRG*EQGHSR
Trigger: TCTGGAATGGCCCTGCTCCCAGCCTCTATCTTCAGG...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCACTCAGAGCACCCTATaGCCGTCTTTGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTTQSTL*PSLPSV
Trigger: GACAGAGGGCAAAGACGGCCATAGGGTGCTCTGAGT...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCAGCCTTCCATGTAGCTaGGATTACAGGCGCACGCCA +
Preference number: 4 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPSLPCS*DYRRTP
Trigger: TGGCGTGCGCCTGTAATCCCAGCTACATGGAAGGCT...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCTCAAGATCTGCGACTTaGTGCTCTCTAGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTSRSAT*CSLGAA
Trigger: AGCTGCGCCTAGAGAGCATCAAGTCGCAGATCTTGA...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR TCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTCAGCTCAATCTTCAGTaGGCGGATACGGATGTGACG +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLQLNLQ*ADTDVT
Trigger: CGTCACATCCGTATCCGCTCACTGAAGATTGAGCTG...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAGCTCAATCTTCAGTaGGCGGATACGGATGTGACG +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTQLNLQ*ADTDVT
Trigger: CGTCACATCCGTATCCGCTCACTGAAGATTGAGCTG...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR TCA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCCCTAGCCCAGAGCAGTaGTTTGGATTCAAATGCCCT +
Preference number: 4 (lower is better)
Translates to: QYIEPAVALSPILDQVDVPSPEQ*FGFKCP
Trigger: AGGGCATTTGAATCCAAATCACTGCTCTGGGCTAGG...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCAAATGTGAGTGGTGTTaGTGGCCGGGTGTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QYIEPAVALSPILDQVDVKCEWC*WPGVSC
Trigger: ACAAGACACACCCGGCCATCAACACCACTCACATTT...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAGCTGCCCATTTGTTGTaGAGTTTGCCCCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPAAHLL*SLPHSE
Trigger: CTCAGAATGGGGCAAACTTCACAACAAATGGGCAGC...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACAGGTCCAGGATCTGCTaGAGCGGCGGCGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNRSRIC*SGGALG
Trigger: GCCCAAGGCGCCGCCGCTGCAGCAGATCCTGGACCT...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTTGGCCTGAGCGTGAGTaGAGCTCAATCTTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLWPERE*SSIFSE
Trigger: CTCACTGAAGATTGAGCTGCACTCACGCTCAGGCCA...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCCAGCTGTGTAGCACTTaGTTGAAGTCGATGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QYIEPAVALSPILDQVDVQLCST*LKSMLC
Trigger: GCAGAGCATCGACTTCAAGCAAGTGCTACACAGCTG...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTCTTGTAGCGCTTAGGTaGGATGATCCAGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSLVALR*DDPVPA
Trigger: GGCTGGGACTGGATCATCGCACCTAAGCGCTACAAG...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTCTTGGATTGGCCTGCTaGACCAAATGGGTATGCGGA +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAALGLAC*TKWVCG
Trigger: TCCGCATACCCATTTGGTGCAGCAGGCCAATCCAAG...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCACTCCCTCTGTTGTATTaGACACGGCTTGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPLPLLY*TRLGRG
Trigger: TCCCCGACCAAGCCGTGTGCAATACAACAGAGGGAG...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATGAGTCTTTGCCTTCTCACTaGTGCTCTTTTTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: CPFHQLAKGESHALGKNESLPSH*CSFCSS
Trigger: AGAGGAACAAAAAGAGCAGCAGTGAGAAGGCAAAGA...CTCATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTTTCTGCCTCTCTCTTTaGCTTCTCACTGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSFCLSL*LLTAAL
Trigger: AAGAGCAGCAGTGAGAAGGCAAAGAGAGAGGCAGAA...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTCTTTCCCCTCCCTGCTaGCAGGTACTGTTAGATTCC +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAALSPPC*QVLLDS
Trigger: GGAATCTAACAGTACCTGGCAGCAGGGAGGGGAAAG...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCGTACTTTCCCCTCCCTaGTGCCAGGTACTGTTAGAT +
Preference number: 4 (lower is better)
Translates to: QYIEPAVALSPILDQVDVVLSPP*CQVLLD
Trigger: ATCTAACAGTACCTGGCAGCAGGGAGGGGAAAGTAC...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCACTTGGCTGTGGCGGGTaGTGTCATTTCTCATTCCAT +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPLGCGG*CHFSFH
Trigger: ATGGAATGAGAAATGACAGCACCCGCCACAGCCAAG...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCATTCCTGGCATTCCAATaGCCCTGTCAGCTCCATACT +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPFLAFQ*PCQLHT
Trigger: AGTATGGAGCTGACAGGGGCATTGGAATGCCAGGAA...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATGAGATTCCTGGGGAATTGTaGTCTAGGTACATGGGAAAA +
Preference number: 4 (lower is better)
Translates to: CPFHQLAKGESHALGKNEIPGEL*SRYMGK
Trigger: TTTTCCCATGTACCTAGAGCACAATTCCCCAGGAAT...CTCATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGAGGTACACCCACAGCTaGGCCTTCAGTACCTTTGTG +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVRYTHS*AFSTFV
Trigger: CACAAAGGTACTGAAGGCCCAGCTGTGGGTGTACCT...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp TCTAAGTGTCCCCCATATTTAATGCCCCAGCTCTCTAGAATCTGTAGAGGGAAGATAAACGGGGCACAGTaGGCAGGGGCCCTCCTATTC +
Preference number: 4 (lower is better)
Translates to: SKCPPYLMPQLSRICRGKINGAQ*AGALLF
Trigger: GAATAGGAGGGCCCCTGCCCACTGTGCCCCGTTTAT...CTTCCCTCTACAGATTCTAGAGAGCTGGGGCATTAAATATGGGGGACACTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCAGACCCAGGGGACTCTaGGGTCTCTATACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTRPRGL*GLYTLS
Trigger: AGAGAGAGTATAGAGACCCCAGAGTCCCCTGGGTCT...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTGCTAGTGACTTGAAATaGCAACCAGTCTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKAASDLK*QPVSAC
Trigger: GCAGGCAGAGACTGGTTGCCATTTCAAGTCACTAGC...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGGGTCTTGTTGTCTTTaGGACTGTTTTGGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSGSCCL*DCFGSS
Trigger: GCTTGAGCCAAAACAGTCCCAAAGACAACAAGACCC...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATGAGTCCAGCATCCAGATGTaGTTAACTGATTCCAATTCC +
Preference number: 4 (lower is better)
Translates to: CPFHQLAKGESHALGKNESSIQM*LTDSNS
Trigger: GGAATTGGAATCAGTTAACCACATCTGGATGCTGGA...CTCATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 72 bp CCCTCAAGCCCAGCTCACTGGCAGGAAAGCTGGACATaGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACG +
Preference number: 4 (lower is better)
Translates to: PSSPAHWQESWT*LLWSIDFPAST
Trigger: CGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAGTGAGCTGGGCTTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCATCCCCTCTTCCACCCTaGGCTTTGGGGTTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GRWAGYPSETEEILYAESSPLPP*ALGLGD
Trigger: GTCTCCTAACCCCAAAGCTCAGGGTGGAAGAGGGGA...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCGGAGGAACAGGGGAATaGGACTTCAGCTCACAGATT +
Preference number: 4 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPGGTGE*DFSSQI
Trigger: AATCTGTGAGCTGAAGTCTCATTCCCCTGTTCCTCC...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTCCCTCCAGGAAGCCTTaGTCTCAGTTGAAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLPSRKP*SQLKKF
Trigger: GAACTTCTTCAACTGAGATCAAGGCTTCCTGGAGGG...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGCCTGCCACAGCCTCCTaGATAGCTGGAACTACAGGA +
Preference number: 4 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQPATAS*IAGTTG
Trigger: TCCTGTAGTTCCAGCTATTCAGGAGGCTGTGGCAGG...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTGTTGCTTTGGAGCATTaGTTTTCCTGCTTCTACGCC +
Preference number: 4 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKAVALEH*FSCFYA
Trigger: GGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAAC...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGTGCTGTTCTCTTATATaGGGGCCTCTGGCAATGCCA +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVCCSLI*GPLAMP
Trigger: TGGCATTGCCAGAGGCCCTCATATAAGAGAACAGCA...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTAGGACTTCTTGGTGTTaGGCTGAGTTCTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKARTSWC*AEFSCC
Trigger: ACAGCAAGAGAACTCAGCTCAACACCAAGAAGTCCT...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTTTTCCCTACTATAGTTaGTCCAGCATCCAGATGTGG +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSFPYYS*SSIQMW
Trigger: CCACATCTGGATGCTGGATCAACTATAGTAGGGAAA...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCAAACCTCCAAGCCAGATaGAGTCCTCCCCTTCCTATC +
Preference number: 4 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPNLQAR*SPPLPI
Trigger: GATAGGAAGGGGAGGACTTCATCTGGCTTGGAGGTT...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGCTTGTAGTGACCCACTaGAATAAAACAGAACATGGG +
Preference number: 4 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRLVVTH*NKTEHG
Trigger: CCCATGTTCTGTTTTATTTCAGTGGGTCACTACAAG...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTTGGCCTGAGCGTGAGTaGAGCTCAATCTTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSWPERE*SSIFSE
Trigger: CTCACTGAAGATTGAGCTGCACTCACGCTCAGGCCA...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGCAGCTGTGTAGCACTTaGTTGAAGTCGATGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVQLCST*LKSMLC
Trigger: GCAGAGCATCGACTTCAAGCAAGTGCTACACAGCTG...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGCTTGTAGCGCTTAGGTaGGATGATCCAGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQLVALR*DDPVPA
Trigger: GGCTGGGACTGGATCATCGCACCTAAGCGCTACAAG...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTCCTCTTGGATTGGCCTaGTGCACCAAATGGGTATGC +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSPLGLA*CTKWVC
Trigger: GCATACCCATTTGGTGCAGCAGGCCAATCCAAGAGG...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCTCGTCTGTCTCTTCTaGCTCTCTCTTTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTLVCLF*LSLCLL
Trigger: GAGAAGGCAAAGAGAGAGGCAGAAGAGACAGACGAG...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGGCCCAATCCCTACTCTaGCAAGATCACGAGGCATTT +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVAQSLL*QDHEAF
Trigger: AAATGCCTCGTGATCTTGGCAGAGTAGGGATTGGGC...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTGCAGGCTGCACCCTCTaGCTAAATAACTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLAGCTL*LNNSAS
Trigger: TGATGCTGAGTTATTTAGCCAGAGGGTGCAGCCTGC...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCAGATTCTCAACTCCTTaGCTTCTAGGCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QYIEPAVALSPILDQVDVRFSTP*LLGTVQ
Trigger: CTGGACAGTGCCTAGAAGCCAAGGAGTTGAGAATCT...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCTCACCTTCTCAAGGGTaGTCACATACCTTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPSPSQG*SHTFAP
Trigger: AGGGGCAAAGGTATGTGACCACCCTTGAGAAGGTGA...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGTGTTCAGAGGGGCACTaGCCAGGTCCACACACATCA +
Preference number: 4 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQCSEGH*PGPHTS
Trigger: TGATGTGTGTGGACCTGGCCAGTGCCCCTCTGAACA...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCATGGCCTTTTTGCAGTaGTTCCCTCCAGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTMAFLQ*FPPGSL
Trigger: AAGGCTTCCTGGAGGGAACCACTGCAAAAAGGCCAT...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCACATGCTAGAGTGCAGTaGTGCGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPHARVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCACCACTGCACTCTAGCATG...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGGGTCCCATGTTGCTGTaGTGTAATCCTTTATCCTTA +
Preference number: 4 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRGPMLL*CNPLSL
Trigger: TAAGGATAAAGGATTACACCACAGCAACATGGGACC...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCAGGAAGGGAGATGGGCTaGATATCCCTCAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPGREMG*ISLRDR
Trigger: TCTGTCTCTGAGGGATATCCAGCCCATCTCCCTTCC...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 72 bp CCAAGCCCCTCACCTTGCCAGTGGAAGAAAGGAGGCTaGGTGTGGGGCTTTCATTTATTACTCCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: PSPSPCQWKKGG*VWGFHLLLHFS
Trigger: ACTGAAATGGAGTAATAAATGAAAGCCCCACACCAAGCCTCCTTTCTTCCACTGGCAAGGTGAGGGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 72 bp GATGGGTTAGAAACTAAACTTCATGTGTCCGCCCTCTaGCCCTTTACTCCCATTCCCAACCCTGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: DGLETKLHVSAL*PFTPIPNPGGF
Trigger: AAAGCCTCCAGGGTTGGGAATGGGAGTAAAGGGCAAGAGGGCGGACACATGAAGTTTAGTTTCTAACCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 72 bp TTGCCCAATCCCTACTCTGCCAAGATCACGAGGCATTaGACCTTGGAGGGAGGTATCTGTTCTTCACTTCTC +
Preference number: 4 (lower is better)
Translates to: LPNPYSAKITRH*TLEGGICSSLL
Trigger: GAGAAGTGAAGAACAGATACCTCCCTCCAAGGTCAAATGCCTCGTGATCTTGGCAGAGTAGGGATTGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCGCGGATATTTTTGCATaGACATGTACTCGCACTGGC +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTADIFA*TCTRTG
Trigger: GCCAGTGCGAGTACATGTTCATGCAAAAATATCCGC...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR TCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGGATTTCTTCTCCTACTaGATAGTCAGGGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVDFFSY*IVRGSP
Trigger: GGGAGATCCCCTGACTATTCAGTAGGAGAAGAAATC...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp TGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATGAGCTCTTACTATTTCCATaGCAACTGGCTTCAATTCAA +
Preference number: 4 (lower is better)
Translates to: CPFHQLAKGESHALGKNELLLFP*QLASIQ
Trigger: TTGAATTGAAGCCAGTTGTCATGGAAATAGTAAGAG...CTCATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCTTACTGCTCCTTTCTTaGCCTCTCCTAACGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTLLLLS*PLLTLS
Trigger: GGAAAGCGTTAGGAGAGGTCAAGAAAGGAGCAGTAA...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp TCTAAGTGTCCCCCATATTTAATGCCCCAGCTCTCTAGAATCTGTAGAGGGAAGGAAACTGAGGCACAGTaGGTCCAGAGGAGAATGGGT +
Preference number: 4 (lower is better)
Translates to: SKCPPYLMPQLSRICRGKETEAQ*VQRRMG
Trigger: ACCCATTCTCCTCTGGACTCACTGTGCCTCAGTTTC...CTTCCCTCTACAGATTCTAGAGAGCTGGGGCATTAAATATGGGGGACACTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAAACTTGAAAACTGCCTaGTGGCCTTTTTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPNLKTA*WPFCSG
Trigger: ACCACTGCAAAAAGGCCATCAGGCAGTTTTCAAGTT...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCTGGATTGTGTCATGTaGCCATCCCAAAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTLDCVM*PSQNSE
Trigger: CTCTGAGTTTTGGGATGGTCACATGACACAATCCAG...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCATTTGTCAAACTTCGTTaGGGAAACCTAGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPFVKLR*GNLGTG
Trigger: CCCTGTTCCTAGGTTTCCTCAACGAAGTTTGACAAA...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCAATTCTGGATCAGGTTaGTGTCACAGGAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QYIEPAVALSPILDQVDVNSGSG*CHRSFP
Trigger: AGGAAAGCTCCTGTGACATCAACCTGATCCAGAATT...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAATTCCTGAAGCTGTaGCATTCTCTGCATACCTGG +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTQFLKL*HSLHTW
Trigger: CCAGGTATGCAGAGAATGTCACAGCTTCAGGAATTG...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGTTGAAGTCGATGCTCTaGCAATGGCCTGAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQLKSML*QWPERE
Trigger: CTCACGCTCAGGCCATTGGCAGAGCATCGACTTCAA...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGCCCTCAATTCCCACCTaGCTCCCTCTGTTGTATTGC +
Preference number: 4 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQPSIPT*LPLLYC
Trigger: GCAATACAACAGAGGGAGGCAGGTGGGAATTGAGGG...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGATGTGTCCGCCCTCTTaGCCTTTACTCCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQMCPPS*PLLPFP
Trigger: TGGGAATGGGAGTAAAGGGCAAGAGGGCGGACACAT...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTCATCCTTCCTTGGCCTaGATGTCCCAAACCTTATAC +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAHPSLA*MSQTLY
Trigger: GTATAAGGTTTGGGACATGCAGGCCAAGGAAGGATG...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGTTCAAGCGATTCTTCTaGCTCAGCCTTCCATGTAGC +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVFKRFF*LSLPCS
Trigger: GCTACATGGAAGGCTGAGGCAGAAGAATCGCTTGAA...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTAGTGTCTTACTGTGTTaGTCAGCTTGGAGTACAGTG +
Preference number: 4 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKASVLLC*SAWSTV
Trigger: CACTGTACTCCAAGCTGAGCAACACAGTAAGACACT...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCACCAGAAGCTGTAGATaGCACTGCCTGCTGATTCTT +
Preference number: 4 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPTRSCR*HCLLIL
Trigger: AAGAATCAGCAGGCAGTGGCATCTACAGCTTCTGGT...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTAATCTGTCTGTACTGCTaGGTCCGTCTCCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLICLYC*VRLLGH
Trigger: ATGGCCCAGGAGACGGACCCAGCAGTACAGACAGAT...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTGCCTGCTGCACCAAATaGGTATGCGGATATTTTTGC +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAACCTK*VCGYFC
Trigger: GCAAAAATATCCGCATACCCATTTGGTGCAGCAGGC...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp TGCCCCTTCCACCAACTGGCCAAGGGGGAGAGTCATGCTCTTGGGAAGAATGAGTCATTATATAGATCCTaGATGTTGAGGGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: CPFHQLAKGESHALGKNESLYRS*MLRVLS
Trigger: AGAGAGAACCCTCAACATCCAGGATCTATATAATGA...CTCATTCTTCCCAAGAGCATGACTCTCCCCCTTGGCCAGTTGGTGGAAGGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTTCTTCACCACTACTCTaGTGCCCTGGTTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSSSPLL*CPGYLS
Trigger: GGACAGATAACCAGGGCACCAGAGTAGTGGTGAAGA...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCTGGATATGGTTCCCTTaGGAAGATAGAATACATAAC +
Preference number: 4 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSWIWFP*EDRIHN
Trigger: GTTATGTATTCTATCTTCCCAAGGGAACCATATCCA...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTTTATATGAGGGCCTCTaGCAATGCCACTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSLYEGL*QCHLFL
Trigger: CAGAAATAAGTGGCATTGCCAGAGGCCCTCATATAA...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGATACGATACTATGTTaGTCAGTCAGTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSDTILC*SVSSGR
Trigger: CCTTCCTGAACTGACTGACCAACATAGTATCGTATC...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTATCAAGATCTGCGACTTaGTGCTCTCTAGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLSRSAT*CSLGAA
Trigger: AGCTGCGCCTAGAGAGCATCAAGTCGCAGATCTTGA...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCATGTGTAGCACTTGCTTaGAGTCGATGCTCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPCVALA*SRCSAN
Trigger: ATTGGCAGAGCATCGACTTCAAGCAAGTGCTACACA...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTTGTGTAGCACTTGCTTaGAGTCGATGCTCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSCVALA*SRCSAN
Trigger: ATTGGCAGAGCATCGACTTCAAGCAAGTGCTACACA...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR TCA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCATGGCTCAGAAAAGGTTaGGTTAGGGTGATGATGGGT +
Preference number: 4 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPWLRKG*VRVMMG
Trigger: ACCCATCATCACCCTAACTCAACCTTTTCTGAGCCA...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTTATACTCTCTCTAATTaGCCTGAAGATAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKAYTLSN*PEDRGW
Trigger: CCAGCCTCTATCTTCAGGTCAATTAGAGAGAGTATA...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCTGTAAATGTGGCACTTaGTTAGGGAGAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTCKCGT*LGRRAQ
Trigger: CTGAGCTCTTCTCCCTAATCAAGTGCCACATTTACA...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTAAAGGAACCCCATTGTaGAGGTTGCTGTGTGAATTA +
Preference number: 4 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKAKGTPL*RLLCEL
Trigger: TAATTCACACAGCAACCTTCACAATGGGGTTCCTTT...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGTCTTTCCAGATTCTTTaGGTCCAAGGTGTCCCTAAC +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVSFQIL*VQGVPN
Trigger: GTTAGGGACACCTTGGACTCAAAGAATCTGGAAAGA...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTACTGATTCCAATTCCTaGAGCTGTGACATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLTDSNS*SCDILC
Trigger: GCAGAGAATGTCACAGCTTCAGGAATTGGAATCAGT...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGCCAGATGTGGTTAACTaGTTCCAATTCCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVPDVVN*FQFLKL
Trigger: CAGCTTCAGGAATTGGAATCAGTTAACCACATCTGG...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCAAGTTTGCCCCATTCTaGGACTTTGGAGAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPKFAPF*DFGEVN
Trigger: GTTCACTTCTCCAAAGTCTCAGAATGGGGCAAACTT...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTGACAAGGAAAAGGACTaGGTTTACCCTTTAAGCCTG +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLDKEKD*VYPLSL
Trigger: CAGGCTTAAAGGGTAAACTCAGTCCTTTTCCTTGTC...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGAGTTTGCTCAAGATCTaGGACTTGATGCTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVSLLKI*DLMLSR
Trigger: CCTAGAGAGCATCAAGTCGCAGATCTTGAGCAAACT...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCATACCTGATGCTTATTaGCCAATCCCTACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTIPDAY*PIPTLP
Trigger: TGGCAGAGTAGGGATTGGGCAATAAGCATCAGGTAT...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAAGCAGATCCAAAAACTaGTGCCCATTTGTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPSRSKN*CPFVVK
Trigger: CTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCT...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGCCTGCTGCACCAAATaGGTATGCGGATATTTTTGC +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSACCTK*VCGYFC
Trigger: GCAAAAATATCCGCATACCCATTTGGTGCAGCAGGC...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCGGAAGAAAGGAGGCTTaGTGTGGGGCTTTCATTTAT +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTGRKEA*CGAFIY
Trigger: ATAAATGAAAGCCCCACACCAAGCCTCCTTTCTTCC...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCCCAGAGCAGTGATTTaGATTCAAATGCCCTGTAAC +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTPRAVI*IQMPCN
Trigger: GTTACAGGGCATTTGAATCCAAATCACTGCTCTGGG...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTCTTGTCCTTCAGGATTaGGGCAGAAGGAAGGATGAA +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSLVLQD*GRRKDE
Trigger: TTCATCCTTCCTTCTGCCCCAATCCTGAAGGACAAG...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCATCTTTGGGACTGTTTTaGCTCAAGCTTTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPSLGLF*LKLFRE
Trigger: CTCTCTGAAAAGCTTGAGCCAAAACAGTCCCAAAGA...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGACAAGGCAAGTTCGTTaGCTATGTTGGTTTAGATTT +
Preference number: 4 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRTRQVR*LCWFRF
Trigger: AAATCTAAACCAACATAGCCAACGAACTTGCCTTGT...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGCTGTGTTGCTCAGCTTaGAGTACAGTGGCTATTTAC +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVLCCSA*STVAIY
Trigger: GTAAATAGCCACTGTACTCCAAGCTGAGCAACACAG...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TCTAAGTGTCCCCCATATTTAATGCCCCAGCTCTCTAGAATCTGTAGAGGGAAGCGCTGTCCCCAATTCTaGATCAGGTTGATGTCACAG +
Preference number: 4 (lower is better)
Translates to: SKCPPYLMPQLSRICRGKRCPQF*IRLMSQ
Trigger: CTGTGACATCAACCTGATCCAGAATTGGGGACAGCG...CTTCCCTCTACAGATTCTAGAGAGCTGGGGCATTAAATATGGGGGACACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGCACTGGCAGGAAAGCTaGACATTGTTGCTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQHWQES*TLLLWS
Trigger: GCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAGTG...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCATCAAGCCCAGCTCACTaGCAGGAAAGCTGGACATTG +
Preference number: 4 (lower is better)
Translates to: GRWAGYPSETEEILYAESSSPAH*QESWTL
Trigger: CAATGTCCAGCTTTCCTGCCAGTGAGCTGGGCTTGA...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGAGAAAAATTGTGCCTTaGAGAGCAGATCCAAAAACT +
Preference number: 4 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRRKIVP*RADPKT
Trigger: AGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCT...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGGGAACATAAGCAGTaGAACTGGAGGCTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAWEHKQ*NWRLQV
Trigger: AACTTGAAGCCTCCAGTTCCACTGCTTATGTTCCCA...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTTGCCCATTCCTCTACTaGAAGATCTTGTTTCACTTT +
Preference number: 4 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKACPFLY*KILFHF
Trigger: AAAGTGAAACAAGATCTTTCAGTAGAGGAATGGGCA...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCAAGATCACGAGGCATTTaGCCTTGGAGGGAGGTATCT +
Preference number: 4 (lower is better)
Translates to: GRWAGYPSETEEILYAESRSRGI*PWREVS
Trigger: AGATACCTCCCTCCAAGGTCAAATGCCTCGTGATCT...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCCATCTTCTTAGTCATTaGACACGAGGTTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPHLLSH*TRGFLS
Trigger: AGACAGGAAACCTCGTGTTCAATGACTAAGAAGATG...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTTTAGCTTTTACTGGGTaGTCAGGGTACTGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLLAFTG*SGYCGN
Trigger: ATTTCCACAGTACCCTGATCACCCAGTAAAAGCTAA...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGTTGCTGTGTCTGATATaGGGAGTGAGGGAGGAACTT +
Preference number: 4 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQLLCLI*GVREEL
Trigger: AAGTTCCTCCCTCACTCCTCATATCAGACACAGCAA...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTATAGGAAGGAAGGTGTaGATAAGGGCAGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSIGRKV*IRAGLL
Trigger: AAGAAGTCCTGCCCTTATTCACACCTTCCTTCCTAT...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCAAGTTTGCTCAAGATCTaGGACTTGATGCTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPSLLKI*DLMLSR
Trigger: CCTAGAGAGCATCAAGTCGCAGATCTTGAGCAAACT...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGAGCTCCATGAATGGATaGAGCCCCTCGGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLSSMNG*SPSAPG
Trigger: GCCGGGAGCCGAGGGGCTGCATCCATTCATGGAGCT...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTGATCAGGTCCCATGTTaGTGTGGTGTAATCCTTTAT +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLDQVPC*CGVILY
Trigger: ATAAAGGATTACACCACAGCAACATGGGACCTGATC...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTAGTAAGGATAGGGTGTaGATCAGGAGATTCTCAACT +
Preference number: 4 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLSKDRV*IRRFST
Trigger: AGTTGAGAATCTCCTGATCCACACCCTATCCTTACT...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGGTTCGTTGGCTATGTTaGTTTAGATTTTTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRVRWLC*FRFLSN
Trigger: GTTTGACAAAAATCTAAACCAACATAGCCAACGAAC...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCAATATTAGCTTTTACTaGGTGATCAGGGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: QYIEPAVALSPILDQVDVNISFY*VIRVLW
Trigger: CCACAGTACCCTGATCACCCAGTAAAAGCTAATATT...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCTTTTCTTGGATAAAATaGAGTCCAGGGTCCCACATT +
Preference number: 4 (lower is better)
Translates to: QYIEPAVALSPILDQVDVFSWIK*SPGSHI
Trigger: AATGTGGGACCCTGGACTCCATTTTATCCAAGAAAA...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 72 bp ACTGGCAGGAAAGCTGGACATTGTTGCTTTGGAGCATaGATTTTCCTGCTTCTACGCCACTACAGACCAGAA +
Preference number: 4 (lower is better)
Translates to: TGRKAGHCCFGA*IFLLLRHYRPE
Trigger: TTCTGGTCTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTATTCTTGGTGTTGAGCTaGGTTCTCTTGCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLFLVLS*VLLLCL
Trigger: CAGACACAGCAAGAGAACTCAGCTCAACACCAAGAA...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGGTATGCGGATATTTTTaGATGAACATGTACTCGCAC +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVVCGYF*MNMYSH
Trigger: GTGCGAGTACATGTTCATGCAAAAATATCCGCATAC...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCTGCACCAAATGGGTATaGGGATATTTTTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTCTKWV*GYFCMN
Trigger: GTTCATGCAAAAATATCCGCATACCCATTTGGTGCA...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR GCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCAAGTGCCCGTGGTAAGTaGTCAGAATTCATCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GRWAGYPSETEEILYAESSARGK*SEFISW
Trigger: CCAAGAGATGAATTCTGAGCACTTACCACGGGCACT...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGTTTTTCAGGTTCAAGTaGTGGATTGTGTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVFFRFK*WIVSCD
Trigger: GTCACATGACACAATCCAGCACTTGAACCTGAAAAA...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCGAACATGTTTGTGTGTaGATACACCCAGTTAATGCA +
Preference number: 4 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPEHVCV*IHPVNA
Trigger: TGCATTAACTGGGTGTATGCACACACAAACATGTTC...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACGTATTGCACACGGCTTaGTCGGGGAACGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNVLHTA*SGNGVM
Trigger: CATCACACCGTTCCCCGACCAAGCCGTGTGCAATAC...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCATTCAGGTTCAAGTGCTaGATTGTGTCATGTGACCAT +
Preference number: 4 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPFRFKC*IVSCDH
Trigger: ATGGTCACATGACACAATCCAGCACTTGAACCTGAA...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTACATTTCTCATTCCATTaGGGGGAAGAAACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLHFSFH*GEETEA
Trigger: TGCCTCAGTTTCTTCCCCTCAATGGAATGAGAAATG...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTACTCTGCCTTCATCTaGAAACAGAATAGATCTGAT +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAYSAFI*KQNRSD
Trigger: ATCAGATCTATTCTGTTTTCAGATGAAGGCAGAGTA...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCAACCTTAAAATTGGAATaGCCTTCCCTTTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPTLKLE*PSLFPL
Trigger: AAGAGGGAAAAGGGAAGGTCATTCCAATTTTAAGGT...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCATTGCCTTCTCACTGCTaGTCTTTTTGTTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GRWAGYPSETEEILYAESLPSHC*SFCSSV
Trigger: GACAGAGGAACAAAAAGAGCAGCAGTGAGAAGGCAA...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGATATTCAGCCTTACTTaGCAGGATTCTCTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVIFSLT*QDSLLE
Trigger: TTCAAGAAGAGAATCCTGGCAAGTAAGGCTGAATAT...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTTTCCTCTCTCTACTCTaGCTTCATCTGAAAACAGAA +
Preference number: 4 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSFLSLL*LHLKTE
Trigger: TTCTGTTTTCAGATGAAGGCAGAGTAGAGAGAGGAA...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCTATTTCCATGACAACTaGCTTCAATTCAAGCCATTT +
Preference number: 4 (lower is better)
Translates to: QYIEPAVALSPILDQVDVYFHDN*LQFKPF
Trigger: AAATGGCTTGAATTGAAGCCAGTTGTCATGGAAATA...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACACACACATCATAAGGTaGGAGGGGGTGCTAACTCCC +
Preference number: 4 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNTHIIR*EGVLTP
Trigger: GGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGT...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTAAAGACAGGGAAAACATaGCAGTACATTGAACCCGCA +
Preference number: 4 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLKTGKT*QYIEPA
Trigger: TGCGGGTTCAATGTACTGCCATGTTTTCCCTGTCTT...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCATGGACATTGTTGCTTTaGAGCATTGATTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPWTLLL*SIDFPA
Trigger: AGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCA...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTACAGCTGTTCCTATGTTaGTCAGAAGTCTCTAACCTC +
Preference number: 4 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLQLFLC*SEVSNL
Trigger: GAGGTTAGAGACTTCTGACCAACATAGGAACAGCTG...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TCTAAGTGTCCCCCATATTTAATGCCCCAGCTCTCTAGAATCTGTAGAGGGAAGCATAAGCAGTGGAACTaGAGGCTTCAAGTTCATGTA +
Preference number: 4 (lower is better)
Translates to: SKCPPYLMPQLSRICRGKHKQWN*RLQVHV
Trigger: TACATGAACTTGAAGCCTCCAGTTCCACTGCTTATG...CTTCCCTCTACAGATTCTAGAGAGCTGGGGCATTAAATATGGGGGACACTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCACCAGGATTCTCTTCTTaGAGCCTAATTATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRWAGYPSETEEILYAESPGFSS*SLIILL
Trigger: GAGGAGAATAATTAGGCTTCAAGAAGAGAATCCTGG...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGATTTCAAGGGTGATGTaGTACGATACTATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQISRVM*YDTMLV
Trigger: GACCAACATAGTATCGTATCACATCACCCTTGAAAT...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTGGAGGTTTTAGGTGTTaGAAAGGATATAAATACAAG +
Preference number: 4 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAGGFRC*KGYKYK
Trigger: CTTGTATTTATATCCTTTGCAACACCTAAAACCTCC...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGACCCTCACCTTGCCAGTaGAAGAAAGGAGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRPSPCQ*KKGGLV
Trigger: CACCAAGCCTCCTTTCTTCCACTGGCAAGGTGAGGG...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 72 bp CATTTATTACTCCATTTCAGTCTCTTTCTCAGTGTTTaGTCTCTGCCTCGTCTGTCTCTTCTGCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: HLLLHFSLFLSV*SLPRLSLLPLS
Trigger: AGAGAGAGGCAGAAGAGACAGACGAGGCAGAGACAAAACACTGAGAAAGAGACTGAAATGGAGTAATAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCATGCACCAAATGGGTATaGGGATATTTTTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: GRWAGYPSETEEILYAESCTKWV*GYFCMN
Trigger: GTTCATGCAAAAATATCCGCATACCCATTTGGTGCA...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp TCTAAGTGTCCCCCATATTTAATGCCCCAGCTCTCTAGAATCTGTAGAGGGAAGAAAGCTGGACATTGTTaGTTTGGAGCATTGATTTTC +
Preference number: 4 (lower is better)
Translates to: SKCPPYLMPQLSRICRGKKAGHC*FGALIF
Trigger: GAAAATCAATGCTCCAAAGCAACAATGTCCAGCTTT...CTTCCCTCTACAGATTCTAGAGAGCTGGGGCATTAAATATGGGGGACACTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGGGGGAGAGCAGGGTTTaGGGAATAAGGGATAAACGG +
Preference number: 4 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLGESRV*GIRDKR
Trigger: CCGTTTATCCCTTATTCCCCAAACCCTGCTCTCCCC...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGAACTACTCTGGTGCCCTaGTTATCTGTCCCACAGCGA +
Preference number: 4 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRTTLVP*LSVPQR
Trigger: TCGCTGTGGGACAGATAACCAGGGCACCAGAGTAGT...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR TCA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACAGCCTTGATCTCAGTTaGAGAAGTTCTTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNSLDLS*RSSFLA
Trigger: TGCCAGGAAAGAACTTCTTCAACTGAGATCAAGGCT...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCAAATAATTATACACTCTaGTTCCTTGTTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRWAGYPSETEEILYAESNNYTL*FLVLPS
Trigger: AGAGGGGAGAACAAGGAAGCAGAGTGTATAATTATT...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCAAGATCCAAAAACTGCTaGCCATTTGTTGTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: GRWAGYPSETEEILYAESRSKNC*PFVVKF
Trigger: AAACTTCACAACAAATGGGCAGCAGTTTTTGGATCT...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp GGGAGATGGGCTGGATATCCCTCAGAGACAGAAGAAATTTTGTATGCAGAATCAAATTTAGAAAAATTGTaGCTTGGAGAGCAGATCCAA +
Preference number: 4 (lower is better)
Translates to: GRWAGYPSETEEILYAESNLEKL*LGEQIQ
Trigger: TTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATT...TGATTCTGCATACAAAATTTCTTCTGTCTCTGAGGGATATCCAGCCCATCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTATATGAAGTGGAACAGTaGATCTTTTGGAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLYEVEQ*IFWKFS
Trigger: AGAAAACTTCCAAAAGATCCACTGTTCCACTTCATA...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
3UTR CAA 72 bp GATAAGGGGAGCTTCAGGGGCAAATATTATAGAGAATaGGCCATAATACCTTTATCCCTTAGAAGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: DKGSFRGKYYRE*AIIPLSLRRED
Trigger: GTCTTCTCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAAGCTCCCCTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGAAAGGAGGCTTGGTGTaGGGCTTTCATTTATTACTC +
Preference number: 4 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLKGGLV*GFHLLL
Trigger: GAGTAATAAATGAAAGCCCCACACCAAGCCTCCTTT...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGACCCATTCTGAGACTTTaGAGAAGTGAACAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRPILRL*RSEQKG
Trigger: TCCCTTTTGTTCACTTCTCCAAAGTCTCAGAATGGG...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR GCA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGGTATGCGGATATTTTTaGATGAACATGTACTCGCAC +
Preference number: 4 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLVCGYF*MNMYSH
Trigger: GTGCGAGTACATGTTCATGCAAAAATATCCGCATAC...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CCA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACACAAAGGTCTTTATTTaGTGGTATTTAAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNTKVFI*WYLRSC
Trigger: ACAGCTCCTTAAATACCACCAAATAAAGACCTTTGT...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS GCA 90 bp GGCTGCAGCGCGTCGCCCTGGAAGTCGTGTAGGTCCAGGATCTGCTaGAGCGGCGGCGCCTTGGGCAGCAGCTGCTTCACCACCTCGCGG +
Preference number: 5 (lower is better)
Translates to: GCSASPWKSCRSRIC*SGGALGSSCFTTSR
Trigger: CCGCGAGGTGGTGAAGCAGCTGCTGCCCAAGGCGCCGCCGCTGCAGCAGATCCTGGACCTACACGACTTCCAGGGCGACGCGCTGCAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS GCA 90 bp AAGATCTGCGACTTGATGCTCTCTAGGCGCAGCTCGCGGCTGTGCTaGCGCCAAACGCACACGGGGCAGCCGTCCGGCTCGGGCGCCACG +
Preference number: 5 (lower is better)
Translates to: KICDLMLSRRSSRLC*RQTHTGQPSGSGAT
Trigger: CGTGGCGCCCGAGCCGGACGGCTGCCCCGTGTGCGTTTGGCGGCAGCACAGCCGCGAGCTGCGCCTAGAGAGCATCAAGTCGCAGATCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS GCA 90 bp CTCAAGATCTGCGACTTGATGCTCTCTAGGCGCAGCTCGCGGCTGTaGTGCCGCCAAACGCACACGGGGCAGCCGTCCGGCTCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: LKICDLMLSRRSSRL*CRQTHTGQPSGSGA
Trigger: GGCGCCCGAGCCGGACGGCTGCCCCGTGTGCGTTTGGCGGCAGCACAGCCGCGAGCTGCGCCTAGAGAGCATCAAGTCGCAGATCTTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS GCA 90 bp TCGGGCTGCAGCGCGTCGCCCTGGAAGTCGTGTAGGTCCAGGATCTaGTGCAGCGGCGGCGCCTTGGGCAGCAGCTGCTTCACCACCTCG +
Preference number: 5 (lower is better)
Translates to: SGCSASPWKSCRSRI*CSGGALGSSCFTTS
Trigger: CGAGGTGGTGAAGCAGCTGCTGCCCAAGGCGCCGCCGCTGCAGCAGATCCTGGACCTACACGACTTCCAGGGCGACGCGCTGCAGCCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CCA 90 bp TACTCGTCCTCCTCCAGGAAGTCCTCGGGCTGCAGCGCGTCGCCCTaGAAGTCGTGTAGGTCCAGGATCTGCTGCAGCGGCGGCGCCTTG +
Preference number: 5 (lower is better)
Translates to: YSSSSRKSSGCSASP*KSCRSRICCSGGAL
Trigger: CAAGGCGCCGCCGCTGCAGCAGATCCTGGACCTACACGACTTCCAGGGCGACGCGCTGCAGCCCGAGGACTTCCTGGAGGAGGACGAGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS TCA 90 bp CTCAAAGTCCACTGTGAGGGGATATCGGCAGCAGCGGGACTCGCTTaGGTGCTCGTCGCAGTCCAGACCCAGGTTCCGCCGGGAACGTTT +
Preference number: 5 (lower is better)
Translates to: LKVHCEGISAAAGLA*VLVAVQTQVPPGTF
Trigger: AAACGTTCCCGGCGGAACCTGGGTCTGGACTGCGACGAGCACTCAAGCGAGTCCCGCTGCTGCCGATATCCCCTCACAGTGGACTTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS GCA 90 bp AAGTCCACTGTGAGGGGATATCGGCAGCAGCGGGACTCGCTTGAGTaGTCGTCGCAGTCCAGACCCAGGTTCCGCCGGGAACGTTTTGTG +
Preference number: 5 (lower is better)
Translates to: KSTVRGYRQQRDSLE*SSQSRPRFRRERFV
Trigger: CACAAAACGTTCCCGGCGGAACCTGGGTCTGGACTGCGACGAGCACTCAAGCGAGTCCCGCTGCTGCCGATATCCCCTCACAGTGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS GCA 90 bp ATGCCCCAGTTGCTCTGTGGCTGGCGGAACCAGCTGTGTAGCACTTaGTTGAAGTCGATGCTCTGCCAATGGCCTGAGCGTGAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: MPQLLCGWRNQLCST*LKSMLCQWPERECS
Trigger: GCTGCACTCACGCTCAGGCCATTGGCAGAGCATCGACTTCAAGCAAGTGCTACACAGCTGGTTCCGCCAGCCACAGAGCAACTGGGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS TCA 90 bp CCCAGTTGCTCTGTGGCTGGCGGAACCAGCTGTGTAGCACTTGCTTaGAGTCGATGCTCTGCCAATGGCCTGAGCGTGAGTGCAGCTCAA +
Preference number: 5 (lower is better)
Translates to: PSCSVAGGTSCVALA*SRCSANGLSVSAAQ
Trigger: TTGAGCTGCACTCACGCTCAGGCCATTGGCAGAGCATCGACTTCAAGCAAGTGCTACACAGCTGGTTCCGCCAGCCACAGAGCAACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS GCA 90 bp GTACTCGCACTGGCCGGAGCAGTAGTTGGCCTTGTAGCGCTTAGGTaGGATGATCCAGTCCCAGCCGAAAGCCTCAAAGTCCACTGTGAG +
Preference number: 5 (lower is better)
Translates to: VLALAGAVVGLVALR*DDPVPAESLKVHCE
Trigger: CTCACAGTGGACTTTGAGGCTTTCGGCTGGGACTGGATCATCGCACCTAAGCGCTACAAGGCCAACTACTGCTCCGGCCAGTGCGAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCTCGCGGCTGATGTaGGGCGCCTCCTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVTSRLM*GASLSR
Trigger: GCGGCTCAAGGAGGCGCCCAACATCAGCCGCGAGGT...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp TCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGCGGTGGTCACATACCTTaGCCCCTTCCACCAACTGGC +
Preference number: 5 (lower is better)
Translates to: STHIIRWEGVLTPTGLLSGGHIP*PLPPTG
Trigger: GCCAGTTGGTGGAAGGGGCAAAGGTATGTGACCACC...GCTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS CCA 90 bp CTGGGATCAAAGGCGTTGATCTCGATGCCCCAGTTGCTCTGTGGCTaGCGGAACCAGCTGTGTAGCACTTGCTTGAAGTCGATGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LGSKALISMPQLLCG*RNQLCSTCLKSMLC
Trigger: GCAGAGCATCGACTTCAAGCAAGTGCTACACAGCTGGTTCCGCCAGCCACAGAGCAACTGGGGCATCGAGATCAACGCCTTTGATCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAAGCAGCGGGACTCGCTaGAGTGCTCGTCGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPSSGTR*SARRSP
Trigger: TGGACTGCGACGAGCACTCAAGCGAGTCCCGCTGCT...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CCA 90 bp CGGAACCAGCTGTGTAGCACTTGCTTGAAGTCGATGCTCTGCCAATaGCCTGAGCGTGAGTGCAGCTCAATCTTCAGTGAGCGGATACGG +
Preference number: 5 (lower is better)
Translates to: RNQLCSTCLKSMLCQ*PERECSSIFSERIR
Trigger: CCGTATCCGCTCACTGAAGATTGAGCTGCACTCACGCTCAGGCCATTGGCAGAGCATCGACTTCAAGCAAGTGCTACACAGCTGGTTCCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCGCCCAGCAGAGCCTCTaGGATTGGCCTGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTAQQSL*DWPAAP
Trigger: TGGTGCAGCAGGCCAATCCAAGAGGCTCTGCTGGGC...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCAATGTTGGGCGCCTCCTaGAGCCGCAGTTTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPMLGAS*SRSLLK
Trigger: CTTGAGCAAACTGCGGCTCAAGGAGGCGCCCAACAT...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGATCTCGATGCCCCAGTaGCTCTGTGGCTGGCGGAAC +
Preference number: 5 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVISMPQ*LCGWRN
Trigger: GTTCCGCCAGCCACAGAGCAACTGGGGCATCGAGAT...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTCCTCCCTCTGTTGTATaGCACACGGCTTGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAPPSVV*HTAWSG
Trigger: CCCCGACCAAGCCGTGTGCAATACAACAGAGGGAGG...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GTCCACACACATCATAAGGTGGGAGGGGGTGCTAACTCCCACTGGGTTGCTGAGAAGATCACGAGGCATTaGACCTTGGAGGGAGGTATC +
Preference number: 5 (lower is better)
Translates to: VHTHHKVGGGANSHWVAEKITRH*TLEGGI
Trigger: GATACCTCCCTCCAAGGTCAAATGCCTCGTGATCTT...CTCAGCAACCCAGTGGGAGTTAGCACCCCCTCCCACCTTATGATGTGTGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTATCTCGATGCCCCAGTaGCTCTGTGGCTGGCGGAAC +
Preference number: 5 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSISMPQ*LCGWRN
Trigger: GTTCCGCCAGCCACAGAGCAACTGGGGCATCGAGAT...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCATTGATTGGGGACATCTaGGTGGGGGTACAACAGGGC +
Preference number: 5 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPLIGDI*VGVQQG
Trigger: GCCCTGTTGTACCCCCACCAAGATGTCCCCAATCAA...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGTATAGATCCTGGATGTaGAGGGTTCTCTCTCCCACC +
Preference number: 5 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRYRSWM*RVLSPT
Trigger: GGTGGGAGAGAGAACCCTCAACATCCAGGATCTATA...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGATGAGCCATCCAGTTTaGCTCACCAGCTTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRMSHPV*LTSLGF
Trigger: AAAGCCCAAGCTGGTGAGCAAAACTGGATGGCTCAT...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTTGCCTGATGGCCTTTTaGCAGTGGTTCCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKACLMAF*QWFPPG
Trigger: TCCTGGAGGGAACCACTGCAAAAAGGCCATCAGGCA...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp CAGTACATTGAACCCGCAGTAGCGCTGTCCCCAATTCTGGATCAGGTTGATGTCCCTCAGGCTCTGATCTaGGGGCTAGCTTTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: QYIEPAVALSPILDQVDVPQALI*GLAFPL
Trigger: GAGAGGAAAAGCTAGCCCCAAGATCAGAGCCTGAGG...GACATCAACCTGATCCAGAATTGGGGACAGCGCTACTGCGGGTTCAATGTACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS CCA 90 bp GCCGTAGATAATCTGCTGCTTGTCATTGAAGTAGAGCATGTTGATTaGGGACATCTTGGTGGGGGTACAACAGGGCCCAGCAGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: AVDNLLLVIEVEHVD*GHLGGGTTGPSRAS
Trigger: AGAGGCTCTGCTGGGCCCTGTTGTACCCCCACCAAGATGTCCCCAATCAACATGCTCTACTTCAATGACAAGCAGCAGATTATCTACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTATGTTGGGCGCCTCCTaGAGCCGCAGTTTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSMLGAS*SRSLLK
Trigger: CTTGAGCAAACTGCGGCTCAAGGAGGCGCCCAACAT...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGCTGGGATCAAAGGCGTaGATCTCGATGCCCCAGTTG +
Preference number: 5 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVLGSKA*ISMPQL
Trigger: CAACTGGGGCATCGAGATCAACGCCTTTGATCCCAG...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCTTGATTGGGGACATCTaGGTGGGGGTACAACAGGGC +
Preference number: 5 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTLIGDI*VGVQQG
Trigger: GCCCTGTTGTACCCCCACCAAGATGTCCCCAATCAA...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCTGTATTGCACACGGCTaGGTCGGGGAACGGTGTGAT +
Preference number: 5 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPCIAHG*VGERCD
Trigger: ATCACACCGTTCCCCGACCAAGCCGTGTGCAATACA...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp CTGACATCCTCTAAGCTCTTGCCTGGAGCCAAGAGGCCTGGTGGTGAAGTAAGGCTTACTGCTCCTTTCTaGACCTCTCCTAACGCTTTC +
Preference number: 5 (lower is better)
Translates to: LTSSKLLPGAKRPGGEVRLTAPF*TSPNAF
Trigger: GAAAGCGTTAGGAGAGGTCAAGAAAGGAGCAGTAAG...CCTTACTTCACCACCAGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCTCAGAATTCATCTCTaGGCTGTGGCGGGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTLRIHL*AVAGAV
Trigger: GACAGCACCCGCCACAGCCAAGAGATGAATTCTGAG...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCGAGGCAGAGGGGAACTaGTACTCTGAAGCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTEAEGN*YSEACD
Trigger: GTCACAGGCTTCAGAGTACAAGTTCCCCTCTGCCTC...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTACATCCTCTAAGCTCTaGCCTGGAGCCAAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAATSSKL*PGAKRP
Trigger: AGGCCTCTTGGCTCCAGGCAAGAGCTTAGAGGATGT...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCATCACTCTGTGCCTCTTaGGGGGTAGGGAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPSLCAS*GVGRNR
Trigger: CCTGTTCCTCCCTACCCCCAAAGAGGCACAGAGTGA...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGGTTCAAGTGCTGGATaGTGTCATGTGACCATCCCA +
Preference number: 5 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSGSSAG*CHVTIP
Trigger: TGGGATGGTCACATGACACAATCCAGCACTTGAACC...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTGCTGGGAGAGGGGTCTaGTTGTCTTTGGGACTGTTT +
Preference number: 5 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKAAGRGV*LSLGLF
Trigger: AAACAGTCCCAAAGACAACAAGACCCCTCTCCCAGC...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGTCCTTGAGCCGCAGTTaGCTCAAGATCTGCGACTTG +
Preference number: 5 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVSLSRS*LKICDL
Trigger: CAAGTCGCAGATCTTGAGCAAACTGCGGCTCAAGGA...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGTCCGCCGGGAACGTTTaGTGTTCTCTAGGACTCGAA +
Preference number: 5 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVSAGNV*CSLGLE
Trigger: TTCGAGTCCTAGAGAACACAAAACGTTCCCGGCGGA...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp TCTAAGTGTCCCCCATATTTAATGCCCCAGCTCTCTAGAATCTGTAGAGGGAAGCATGTGTCCGCCCTCTaGCCCTTTACTCCCATTCCC +
Preference number: 5 (lower is better)
Translates to: SKCPPYLMPQLSRICRGKHVSAL*PFTPIP
Trigger: GGGAATGGGAGTAAAGGGCAAGAGGGCGGACACATG...CTTCCCTCTACAGATTCTAGAGAGCTGGGGCATTAAATATGGGGGACACTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTTCTTTGGTCTCTCTCTaGGCTGAGGGAATTTGGGCA +
Preference number: 5 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKASLVSL*AEGIWA
Trigger: TGCCCAAATTCCCTCAGCCAAGAGAGAGACCAAAGA...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCGGGAGAGTCATGCTCTaGGGAAGAATGAGCCATCCA +
Preference number: 5 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTGRVML*GRMSHP
Trigger: TGGATGGCTCATTCTTCCCAAGAGCATGACTCTCCC...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCTCTTTCCATCCTTCCTaGGCCTGCATGTCCCAAACC +
Preference number: 5 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTSFHPS*ACMSQT
Trigger: GGTTTGGGACATGCAGGCCAAGGAAGGATGGAAAGA...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGCTGGGATCAAAGGCGTaGATCTCGATGCCCCAGTTG +
Preference number: 5 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQLGSKA*ISMPQL
Trigger: CAACTGGGGCATCGAGATCAACGCCTTTGATCCCAG...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTTGGAAGAAAGGAGGCTaGGTGTGGGGCTTTCATTTA +
Preference number: 5 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKAWKKGG*VWGFHL
Trigger: TAAATGAAAGCCCCACACCAAGCCTCCTTTCTTCCA...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTAGAATCCTTCCCACCTaGGTCTGCTGGCTCTATTCC +
Preference number: 5 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSRILPT*VCWLYS
Trigger: GGAATAGAGCCAGCAGACCAAGGTGGGAAGGATTCT...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GCATTCCAATGCCCCTGTCAGCTCCATACTCCTCAGACACCCTTAACAAAGGCTCAGTGTCTTACTGTGTaGCTCAGCTTGGAGTACAGT +
Preference number: 5 (lower is better)
Translates to: AFQCPCQLHTPQTPLTKAQCLTV*LSLEYS
Trigger: ACTGTACTCCAAGCTGAGCAACACAGTAAGACACTG...AGCCTTTGTTAAGGGTGTCTGAGGAGTATGGAGCTGACAGGGGCATTGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGTCCTTGAGCCGCAGTTaGCTCAAGATCTGCGACTTG +
Preference number: 5 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQSLSRS*LKICDL
Trigger: CAAGTCGCAGATCTTGAGCAAACTGCGGCTCAAGGA...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTCTGTGTAGCACTTGCTaGAAGTCGATGCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSLCSTC*KSMLCQ
Trigger: TTGGCAGAGCATCGACTTCAAGCAAGTGCTACACAG...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGTCCGCCGGGAACGTTTaGTGTTCTCTAGGACTCGAA +
Preference number: 5 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQSAGNV*CSLGLE
Trigger: TTCGAGTCCTAGAGAACACAAAACGTTCCCGGCGGA...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGGTATGCGGATATTTTaGCATGAACATGTACTCGCA +
Preference number: 5 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSGMRIF*HEHVLA
Trigger: TGCGAGTACATGTTCATGCAAAAATATCCGCATACC...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GGAACTTGTACTCTGAAGCCTGTGACTCCTCTTAAGCCTCACATCTCTTCACCAGGCCTAGCTAGTGACTaGAAATGGCAACCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: GTCTLKPVTPLKPHISSPGLASD*KWQPVS
Trigger: AGAGACTGGTTGCCATTTCAAGTCACTAGCTAGGCC...TGGTGAAGAGATGTGAGGCTTAAGAGGAGTCACAGGCTTCAGAGTACAAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTCATATTCCTGGGGAATaGTGCTCTAGGTACATGGGA +
Preference number: 5 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAHIPGE*CSRYMG
Trigger: TCCCATGTACCTAGAGCACAATTCCCCAGGAATATG...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCCAATTCTGGATCAGGTaGATGTCACAGGAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPQFWIR*MSQELS
Trigger: GGAAAGCTCCTGTGACATCAACCTGATCCAGAATTG...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCCACAGGAAAGCTGGACATaGTTGCTTTGGAGCATTGAT +
Preference number: 5 (lower is better)
Translates to: EVKLPTHQVFAPAACSDPQESWT*LLWSID
Trigger: ATCAATGCTCCAAAGCAACAATGTCCAGCTTTCCTG...TGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCGTTTTGCTCACCAGCTaGGGCTTTACTTTAGTTCAG +
Preference number: 5 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPVLLTS*GFTLVQ
Trigger: CTGAACTAAAGTAAAGCCCAAGCTGGTGAGCAAAAC...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGGTCTTTGGGACTGTTTaGGCTCAAGCTTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVVFGTV*AQAFQR
Trigger: TCTCTGAAAAGCTTGAGCCAAAACAGTCCCAAAGAC...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGCACGCCCGGCTAATTTaGGGTATTTTAGTAGAGATG +
Preference number: 5 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVHARLI*GILVEM
Trigger: CATCTCTACTAAAATACCCAAAATTAGCCGGGCGTG...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGACCTGTTGCTTTGGAGCATaGATTTTCCTGCTTCTACGC +
Preference number: 5 (lower is better)
Translates to: KRLSYPPTKSLLQQLVVTCCFGA*IFLLLR
Trigger: GCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACA...GGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTGTGTCCCTAACTTTCTaGTTATCTCTTTCCCTTATG +
Preference number: 5 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSVSLTF*LSLSLM
Trigger: CATAAGGGAAAGAGATAACAAGAAAGTTAGGGACAC...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGAGCAGCGGGACTCGCTaGAGTGCTCGTCGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLSSGTR*SARRSP
Trigger: TGGACTGCGACGAGCACTCAAGCGAGTCCCGCTGCT...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTGGTATGCGGATATTTTaGCATGAACATGTACTCGCA +
Preference number: 5 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAGMRIF*HEHVLA
Trigger: TGCGAGTACATGTTCATGCAAAAATATCCGCATACC...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS-3UTR CAA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGAGCCCAGCAGAGCCTCTaGGATTGGCCTGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRAQQSL*DWPAAP
Trigger: TGGTGCAGCAGGCCAATCCAAGAGGCTCTGCTGGGC...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp TGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTTCACTGCTGCTCTTTTaGTTCCTCTGTCTCTATCAC +
Preference number: 5 (lower is better)
Translates to: CEEVKLPTHQVFAPAACSSLLLF*FLCLYH
Trigger: GTGATAGAGACAGAGGAACAAAAAGAGCAGCAGTGA...ACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTAACGAGGCATTTGACCTaGGAGGGAGGTATCTGTTCT +
Preference number: 5 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLTRHLT*EGGICS
Trigger: AGAACAGATACCTCCCTCCAAGGTCAAATGCCTCGT...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp ATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTTTTGTCAAACTTCGTaGAGGAAACCTAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: ILCEEVKLPTHQVFAPAAFCQTS*RKPRNR
Trigger: CCTGTTCCTAGGTTTCCTCAACGAAGTTTGACAAAA...AGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GTGTCATGTGACCATCCCAAAACTCAGAGCACCCTATGGCCGTCTTTGCCCTCTACTTCCCCTAGATCTTaGAACAGTGTTTTCCAATTT +
Preference number: 5 (lower is better)
Translates to: VSCDHPKTQSTLWPSLPSTSPRS*NSVFQF
Trigger: AAATTGGAAAACACTGTTCAAAGATCTAGGGGAAGT...AGAGGGCAAAGACGGCCATAGGGTGCTCTGAGTTTTGGGATGGTCACATGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp TGCCTTGGAGAGCAGATCCAAAAACTGCTGCCCATTTGTTGTGAAGTTTGCCCCGGAACAGTGGATCTTTaGGAAGTTTTCTTCGTCTCT +
Preference number: 5 (lower is better)
Translates to: CLGEQIQKLLPICCEVCPGTVDL*EVFFVS
Trigger: AGAGACGAAGAAAACTTCCAAAAGATCCACTGTTCC...GGGGCAAACTTCACAACAAATGGGCAGCAGTTTTTGGATCTGCTCTCCAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AGCTCTCTAGAATCTGTAGAGGGAAGATACCTGATGCTTATTGCCCAATCCCTATTAGTGTTTTCTGTCTaGCTCCAGGACCCCATCTTC +
Preference number: 5 (lower is better)
Translates to: SSLESVEGRYLMLIAQSLLVFSV*LQDPIF
Trigger: GAAGATGGGGTCCTGGAGCAAGACAGAAAACACTAA...TAGGGATTGGGCAATAAGCATCAGGTATCTTCCCTCTACAGATTCTAGAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AACCTTCTCATCTGCAAACTTCAAACACTCCCCACCCTGACTATGCCCCTGCTTGGGAGGATAACTTTTTaGCTGTTCTCTTATATGAGG +
Preference number: 5 (lower is better)
Translates to: NLLICKLQTLPTLTMPLLGRITF*LFSYMR
Trigger: CCTCATATAAGAGAACAGCAAAAAAGTTATCCTCCC...AAGCAGGGGCATAGTCAGGGTGGGGAGTGTTTGAAGTTTGCAGATGAGAAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTTGCTCCAGCAGCTTGTAGTGTTCTCCACATACTCTTaGAGCATGAATAGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: VKRLSYPPTKSLLQQLVVFSTYS*SMNSSG
Trigger: TCCTGAACTATTCATGCTCAAAGAGTATGTGGAGAA...CACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGCATCTCTCTGTCTTTTaGTCAAACCTTCTCATCTGC +
Preference number: 5 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQHLSVF*SNLLIC
Trigger: GCAGATGAGAAGGTTTGACAAAAAGACAGAGAGATG...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGCAGAGCTGTTACGCATaGTTAGCTAAATCATTGGGA +
Preference number: 5 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQQSCYA*LAKSLG
Trigger: TCCCAATGATTTAGCTAACAATGCGTAACAGCTCTG...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AGCTGGACATTGTTGCTTTGGAGCATTGATTTTCCTGCTTCTACGCCACTACAGGAAAGCTGGACATTGTaGCTTTGGAGCATTGATTTT +
Preference number: 5 (lower is better)
Translates to: SWTLLLWSIDFPASTPLQESWTL*LWSIDF
Trigger: AAAATCAATGCTCCAAAGCAACAATGTCCAGCTTTC...CTGTAGTGGCGTAGAAGCAGGAAAATCAATGCTCCAAAGCAACAATGTCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACTCCCTCCAGGAAGCCTaGATCTCAGTTGAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNSLQEA*ISVEEV
Trigger: AACTTCTTCAACTGAGATCAAGGCTTCCTGGAGGGA...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGCTGTGTAGCACTTGCTaGAAGTCGATGCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLLCSTC*KSMLCQ
Trigger: TTGGCAGAGCATCGACTTCAAGCAAGTGCTACACAG...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp AGTTTAGATAATTTAGAAAAATTGTGCCTTGGAGAGCAGATCCAAAAACTGCTGGAGATTCTCAACTCCTaGGCTTCTAGGCACTGTCCA +
Preference number: 5 (lower is better)
Translates to: SLDNLEKLCLGEQIQKLLEILNS*ASRHCP
Trigger: TGGACAGTGCCTAGAAGCCAAGGAGTTGAGAATCTC...CAGCAGTTTTTGGATCTGCTCTCCAAGGCACAATTTTTCTAAATTATCTAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGACTGCTGATTCTTAGCTaGGGGCCCCTGCCATTTAAA +
Preference number: 5 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRLLILS*GPLPFK
Trigger: TTTAAATGGCAGGGGCCCCAAGCTAAGAATCAGCAG...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp GTTGGCTATGTTGGTTTAGATTTTTGTCAAACTTCGTTGAGGAAACCTAGGAACCACAAAGGTCTTTATTaGGTGGTATTTAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: VGYVGLDFCQTSLRKPRNHKGLY*VVFKEL
Trigger: CAGCTCCTTAAATACCACCAAATAAAGACCTTTGTG...GTTCCTAGGTTTCCTCAACGAAGTTTGACAAAAATCTAAACCAACATAGCCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGATATGAGTGCCCTAGTTaGAACATGTTTGTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRYECPS*NMFVCA
Trigger: TGCACACACAAACATGTTCAAACTAGGGCACTCATA...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS-3UTR CAA 90 bp TTCAGGGGCAAATATTATAGAGAATTGGCCATAATACCTTTATCCCTTAGAAGATCAGGCAATATTCTTTaGCCATTCCCAACTCATATT +
Preference number: 5 (lower is better)
Translates to: FRGKYYRELAIIPLSLRRSGNIL*PFPTHI
Trigger: AATATGAGTTGGGAATGGCAAAAGAATATTGCCTGA...TCTTCTAAGGGATAAAGGTATTATGGCCAATTCTCTATAATATTTGCCCCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257868.10
CDS GCA 72 bp GACTTGATGCTCTCTAGGCGCAGCTCGCGGCTGTGCTaGCGCCAAACGCACACGGGGCAGCCGTCCGGCTCG +
Preference number: 6 (lower is better)
Translates to: DLMLSRRSSRLC*RQTHTGQPSGS
Trigger: CGAGCCGGACGGCTGCCCCGTGTGCGTTTGGCGGCAGCACAGCCGCGAGCTGCGCCTAGAGAGCATCAAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS GCA 72 bp TGCGACTTGATGCTCTCTAGGCGCAGCTCGCGGCTGTaGTGCCGCCAAACGCACACGGGGCAGCCGTCCGGC +
Preference number: 6 (lower is better)
Translates to: CDLMLSRRSSRL*CRQTHTGQPSG
Trigger: GCCGGACGGCTGCCCCGTGTGCGTTTGGCGGCAGCACAGCCGCGAGCTGCGCCTAGAGAGCATCAAGTCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS GCA 72 bp GCGTCGCCCTGGAAGTCGTGTAGGTCCAGGATCTGCTaGAGCGGCGGCGCCTTGGGCAGCAGCTGCTTCACC +
Preference number: 6 (lower is better)
Translates to: ASPWKSCRSRIC*SGGALGSSCFT
Trigger: GGTGAAGCAGCTGCTGCCCAAGGCGCCGCCGCTGCAGCAGATCCTGGACCTACACGACTTCCAGGGCGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS TCA 72 bp ATGGATGCAGCCCCTCGGCTCCCGGCCCCAGGGAGGTaGCAGCCAGGTCTGTGCCACTGGGATCAAAGGCGT +
Preference number: 6 (lower is better)
Translates to: MDAAPRLPAPGR*QPGLCHWDQRR
Trigger: ACGCCTTTGATCCCAGTGGCACAGACCTGGCTGTCACCTCCCTGGGGCCGGGAGCCGAGGGGCTGCATCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CCA 72 bp TCCTCCAGGAAGTCCTCGGGCTGCAGCGCGTCGCCCTaGAAGTCGTGTAGGTCCAGGATCTGCTGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: SSRKSSGCSASP*KSCRSRICCSG
Trigger: GCCGCTGCAGCAGATCCTGGACCTACACGACTTCCAGGGCGACGCGCTGCAGCCCGAGGACTTCCTGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS TCA 72 bp CACTGTGAGGGGATATCGGCAGCAGCGGGACTCGCTTaGGTGCTCGTCGCAGTCCAGACCCAGGTTCCGCCG +
Preference number: 6 (lower is better)
Translates to: HCEGISAAAGLA*VLVAVQTQVPP
Trigger: CGGCGGAACCTGGGTCTGGACTGCGACGAGCACTCAAGCGAGTCCCGCTGCTGCCGATATCCCCTCACAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS GCA 72 bp GTGAGGGGATATCGGCAGCAGCGGGACTCGCTTGAGTaGTCGTCGCAGTCCAGACCCAGGTTCCGCCGGGAA +
Preference number: 6 (lower is better)
Translates to: VRGYRQQRDSLE*SSQSRPRFRRE
Trigger: TTCCCGGCGGAACCTGGGTCTGGACTGCGACGAGCACTCAAGCGAGTCCCGCTGCTGCCGATATCCCCTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CCA 72 bp TCCTGGGCCATGCTAATGACGGTCTCGGTGGTGGCGTaGTACTCGTCCTCCTCCAGGAAGTCCTCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: SWAMLMTVSVVA*YSSSSRKSSGC
Trigger: GCAGCCCGAGGACTTCCTGGAGGAGGACGAGTACCACGCCACCACCGAGACCGTCATTAGCATGGCCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 90 bp CCCAGGGAGGTGACAGCCAGGTCTGTGCCACTGGGATCAAAGGCGTaGATCTCGATGCCCCAGTTGCTCTGTGGCTGGCGGAACCAGCTG +
Preference number: 6 (lower is better)
Translates to: PREVTARSVPLGSKA*ISMPQLLCGWRNQL
Trigger: CAGCTGGTTCCGCCAGCCACAGAGCAACTGGGGCATCGAGATCAACGCCTTTGATCCCAGTGGCACAGACCTGGCTGTCACCTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 90 bp TTCACCACCTCGCGGCTGATGTTGGGCGCCTCCTTGAGCCGCAGTTaGCTCAAGATCTGCGACTTGATGCTCTCTAGGCGCAGCTCGCGG +
Preference number: 6 (lower is better)
Translates to: FTTSRLMLGASLSRS*LKICDLMLSRRSSR
Trigger: CCGCGAGCTGCGCCTAGAGAGCATCAAGTCGCAGATCTTGAGCAAACTGCGGCTCAAGGAGGCGCCCAACATCAGCCGCGAGGTGGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CCA 72 bp GCTGGGCGGGGTACAGGCCGTAGGTACACCCACAGCTaGGCCTTCAGTACCTTTGTGAACATCACCTTGGGG +
Preference number: 6 (lower is better)
Translates to: AGRGTGRRYTHS*AFSTFVNITLG
Trigger: CCCCAAGGTGATGTTCACAAAGGTACTGAAGGCCCAGCTGTGGGTGTACCTACGGCCTGTACCCCGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 72 bp GTGACAGCCAGGTCTGTGCCACTGGGATCAAAGGCGTaGATCTCGATGCCCCAGTTGCTCTGTGGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: VTARSVPLGSKA*ISMPQLLCGWR
Trigger: CCGCCAGCCACAGAGCAACTGGGGCATCGAGATCAACGCCTTTGATCCCAGTGGCACAGACCTGGCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 90 bp GGCAGCAGCTGCTTCACCACCTCGCGGCTGATGTTGGGCGCCTCCTaGAGCCGCAGTTTGCTCAAGATCTGCGACTTGATGCTCTCTAGG +
Preference number: 6 (lower is better)
Translates to: GSSCFTTSRLMLGAS*SRSLLKICDLMLSR
Trigger: CCTAGAGAGCATCAAGTCGCAGATCTTGAGCAAACTGCGGCTCAAGGAGGCGCCCAACATCAGCCGCGAGGTGGTGAAGCAGCTGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 90 bp CCCCAGTTGCTCTGTGGCTGGCGGAACCAGCTGTGTAGCACTTGCTaGAAGTCGATGCTCTGCCAATGGCCTGAGCGTGAGTGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: PQLLCGWRNQLCSTC*KSMLCQWPERECSS
Trigger: TGAGCTGCACTCACGCTCAGGCCATTGGCAGAGCATCGACTTCAAGCAAGTGCTACACAGCTGGTTCCGCCAGCCACAGAGCAACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS GCA 72 bp CTGGCCGGAGCAGTAGTTGGCCTTGTAGCGCTTAGGTaGGATGATCCAGTCCCAGCCGAAAGCCTCAAAGTC +
Preference number: 6 (lower is better)
Translates to: LAGAVVGLVALR*DDPVPAESLKV
Trigger: GACTTTGAGGCTTTCGGCTGGGACTGGATCATCGCACCTAAGCGCTACAAGGCCAACTACTGCTCCGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CCA 72 bp CTTGGTGGGGGTACAACAGGGCCCAGCAGAGCCTCTTaGATTGGCCTGCTGCACCAAATGGGTATGCGGATA +
Preference number: 6 (lower is better)
Translates to: LGGGTTGPSRAS*IGLLHQMGMRI
Trigger: TATCCGCATACCCATTTGGTGCAGCAGGCCAATCCAAGAGGCTCTGCTGGGCCCTGTTGTACCCCCACCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 72 bp TGCTTCACCACCTCGCGGCTGATGTTGGGCGCCTCCTaGAGCCGCAGTTTGCTCAAGATCTGCGACTTGATG +
Preference number: 6 (lower is better)
Translates to: CFTTSRLMLGAS*SRSLLKICDLM
Trigger: CATCAAGTCGCAGATCTTGAGCAAACTGCGGCTCAAGGAGGCGCCCAACATCAGCCGCGAGGTGGTGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 72 bp CTCTGTGGCTGGCGGAACCAGCTGTGTAGCACTTGCTaGAAGTCGATGCTCTGCCAATGGCCTGAGCGTGAG +
Preference number: 6 (lower is better)
Translates to: LCGWRNQLCSTC*KSMLCQWPERE
Trigger: CTCACGCTCAGGCCATTGGCAGAGCATCGACTTCAAGCAAGTGCTACACAGCTGGTTCCGCCAGCCACAGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 72 bp TCTTGGTGGGGGTACAACAGGGCCCAGCAGAGCCTCTaGGATTGGCCTGCTGCACCAAATGGGTATGCGGAT +
Preference number: 6 (lower is better)
Translates to: SWWGYNRAQQSL*DWPAAPNGYAD
Trigger: ATCCGCATACCCATTTGGTGCAGCAGGCCAATCCAAGAGGCTCTGCTGGGCCCTGTTGTACCCCCACCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 90 bp AGGTCTGTGCCACTGGGATCAAAGGCGTTGATCTCGATGCCCCAGTaGCTCTGTGGCTGGCGGAACCAGCTGTGTAGCACTTGCTTGAAG +
Preference number: 6 (lower is better)
Translates to: RSVPLGSKALISMPQ*LCGWRNQLCSTCLK
Trigger: CTTCAAGCAAGTGCTACACAGCTGGTTCCGCCAGCCACAGAGCAACTGGGGCATCGAGATCAACGCCTTTGATCCCAGTGGCACAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS TCA 72 bp TCTGTGGCTGGCGGAACCAGCTGTGTAGCACTTGCTTaGAGTCGATGCTCTGCCAATGGCCTGAGCGTGAGT +
Preference number: 6 (lower is better)
Translates to: SVAGGTSCVALA*SRCSANGLSVS
Trigger: ACTCACGCTCAGGCCATTGGCAGAGCATCGACTTCAAGCAAGTGCTACACAGCTGGTTCCGCCAGCCACAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS GCA 72 bp TTGCTCTGTGGCTGGCGGAACCAGCTGTGTAGCACTTaGTTGAAGTCGATGCTCTGCCAATGGCCTGAGCGT +
Preference number: 6 (lower is better)
Translates to: LLCGWRNQLCST*LKSMLCQWPER
Trigger: ACGCTCAGGCCATTGGCAGAGCATCGACTTCAAGCAAGTGCTACACAGCTGGTTCCGCCAGCCACAGAGCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 72 bp GTGGGGGTACAACAGGGCCCAGCAGAGCCTCTTGGATaGGCCTGCTGCACCAAATGGGTATGCGGATATTTT +
Preference number: 6 (lower is better)
Translates to: VGVQQGPAEPLG*ACCTKWVCGYF
Trigger: AAAATATCCGCATACCCATTTGGTGCAGCAGGCCAATCCAAGAGGCTCTGCTGGGCCCTGTTGTACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CCA 72 bp TGGGGGTACAACAGGGCCCAGCAGAGCCTCTTGGATTaGCCTGCTGCACCAAATGGGTATGCGGATATTTTT +
Preference number: 6 (lower is better)
Translates to: WGYNRAQQSLLD*PAAPNGYADIF
Trigger: AAAAATATCCGCATACCCATTTGGTGCAGCAGGCCAATCCAAGAGGCTCTGCTGGGCCCTGTTGTACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CCA 72 bp CTGTGTAGCACTTGCTTGAAGTCGATGCTCTGCCAATaGCCTGAGCGTGAGTGCAGCTCAATCTTCAGTGAG +
Preference number: 6 (lower is better)
Translates to: LCSTCLKSMLCQ*PERECSSIFSE
Trigger: CTCACTGAAGATTGAGCTGCACTCACGCTCAGGCCATTGGCAGAGCATCGACTTCAAGCAAGTGCTACACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 90 bp GCCTCTTGGATTGGCCTGCTGCACCAAATGGGTATGCGGATATTTTaGCATGAACATGTACTCGCACTGGCCGGAGCAGTAGTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: ASWIGLLHQMGMRIF*HEHVLALAGAVVGL
Trigger: AAGGCCAACTACTGCTCCGGCCAGTGCGAGTACATGTTCATGCAAAAATATCCGCATACCCATTTGGTGCAGCAGGCCAATCCAAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CCA 72 bp AATCTGCTGCTTGTCATTGAAGTAGAGCATGTTGATTaGGGACATCTTGGTGGGGGTACAACAGGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: NLLLVIEVEHVD*GHLGGGTTGPS
Trigger: GCTGGGCCCTGTTGTACCCCCACCAAGATGTCCCCAATCAACATGCTCTACTTCAATGACAAGCAGCAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 72 bp ATTGGCCTGCTGCACCAAATGGGTATGCGGATATTTTaGCATGAACATGTACTCGCACTGGCCGGAGCAGTA +
Preference number: 6 (lower is better)
Translates to: IGLLHQMGMRIF*HEHVLALAGAV
Trigger: TACTGCTCCGGCCAGTGCGAGTACATGTTCATGCAAAAATATCCGCATACCCATTTGGTGCAGCAGGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257868.10
ENST00000546799.1
CDS CAA 90 bp TTTTTATCCTCTGTGAAGAGGTTAAGTTACCCACCCACCAAGTCTTaGCTCCAGCAGCTTGTAGTGACCCACTTAAGAGCAGCCACAGCG +
Preference number: 6 (lower is better)
Translates to: FLSSVKRLSYPPTKS*LQQLVVTHLRAATA
Trigger: CGCTGTGGCTGCTCTTAAGTGGGTCACTACAAGCTGCTGGAGCAAAGACTTGGTGGGTGGGTAACTTAACCTCTTCACAGAGGATAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546799.1