Pregenerated sensors for GCNA (Homo sapiens)
Ensembl gene IDs: ENSG00000147174Ensembl transcript IDs: ENST00000373695.1, ENST00000373696.8, ENST00000471950.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTAGTTATGGCAACGGGTaGCCCTGGGCAGCTCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: HIPKANPSHLLHNFSIILSYGNG*PWAAPG Trigger: ACCCGGAGCTGCCCAGGGTCACCCGTTGCCATAACT...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR GCA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTTCCTCCTCCGGCTCTTaGAAGCGGGGCAGCTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: HIPKANPSHLLHNFSIILSSSGS*KRGSSF Trigger: AAAAGAGCTGCCCCGCTTGCAAGAGCCGGAGGAGGA...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATATCTTCGGAGCTCTTCTaGCCACAGAAGACCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSISSELF*PQKTHW Trigger: CCAGTGGGTCTTCTGTGGCCAGAAGAGCTCCGAAGA...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAGCAAATGGTCACACGTaGGGCACAATACGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSIANGHT*GTIRVP Trigger: TGGGACCCGTATTGTGCCCCACGTGTGACCATTTGC...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR TCA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTATGGCAGGCTTCACATaGCAACACTCCGGACTCTCA | + |
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Preference number: 4 (lower is better) Translates to: HIPKANPSHLLHNFSIILMAGFT*QHSGLS Trigger: TGAGAGTCCGGAGTGTTGTCATGTGAAGCCTGCCAT...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR TCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATACGGGTCCCATCTTTCTaGGTTAATGGCACCATGACC | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSIRVPSF*VNGTMT Trigger: GGTCATGGTGCCATTAACTCAGAAAGATGGGACCCG...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CCA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTCCACAGAAGACCCACTaGTGTCACCACTCCTTGACT | + |
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Preference number: 4 (lower is better) Translates to: HIPKANPSHLLHNFSIILPQKTH*CHHSLT Trigger: AGTCAAGGAGTGGTGACACCAGTGGGTCTTCTGTGG...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CCA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTAGCCAATCTGGATCTTaGCAAAGCGCCGCCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: HIPKANPSHLLHNFSIILSQSGS*QSAATL Trigger: CAAAGTGGCGGCGCTTTGCCAAGATCCAGATTGGCT...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR TCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATATGGCAGCTTTCTCTCTaGAACTTCAGGGTTAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSIWQLSL*NFRVSL Trigger: GAGGCTAACCCTGAAGTTTCAGAGAGAAAGCTGCCA...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR TCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAGAGTTAATGGCACCATaGCCAGAGACCCCTTGCATT | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSIELMAP*PETPCI Trigger: AATGCAAGGGGTCTCTGGTCATGGTGCCATTAACTC...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATACCACAGAAGACCCACTaGTGTCATCACTGCTTGACT | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSIPQKTH*CHHCLT Trigger: AGTCAAGCAGTGATGACACCAGTGGGTCTTCTGTGG...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAACTTTCAAGCCAATCTaGATCTTGGCAAAGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSITFKPI*ILAKRR Trigger: GCGGCGCTTTGCCAAGATCCAGATTGGCTTGAAAGT...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAAGCCAGGAGGCAGCATaGCACATTTCATGGATCAAG | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSISQEAA*HISWIK Trigger: CTTGATCCATGAAATGTGCCATGCTGCCTCCTGGCT...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATATGGTGTCCAACGATTTaGTGTAGCAGCCAATCCTCG | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSIWCPTI*CSSQSS Trigger: CGAGGATTGGCTGCTACACCAAATCGTTGGACACCA...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR GCA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTACCACATCTCACCAGTaGTGCATAAGCCAGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HIPKANPSHLLHNFSIILTTSHQ*CISQQF Trigger: AAACTGCTGGCTTATGCAGCACTGGTGAGATGTGGT...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATACACATACACAGCAAATaGTCACACGTGGGGCACAAT | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSIHIHSK*SHVGHN Trigger: ATTGTGCCCCACGTGTGACCATTTGCTGTGTATGTG...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR TCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATATTCCATGCGTCACCATaGGAATCATGGATACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSIFHASP*ESWIPS Trigger: TGATGGTATCCATGATTCTCATGGTGACGCATGGAA...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR GCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATATGTTATTCCAGCCTATaGGTAGTTTCTCTGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSICYSSL*VVSLAA Trigger: AGCTGCCAGAGAAACTACGCATAGGCTGGAATAACA...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CCA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTGCATGGCACATTTCATaGATCAAGGTATCCCGGATT | + |
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Preference number: 4 (lower is better) Translates to: HIPKANPSHLLHNFSIILAWHIS*IKVSRI Trigger: AATCCGGGATACCTTGATCCATGAAATGTGCCATGC...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CCA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTCCGGGTGTATCCTGTTaGATTTCCTGGCATAATACT | + |
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Preference number: 4 (lower is better) Translates to: HIPKANPSHLLHNFSIILPGVSC*ISWHNT Trigger: AGTATTATGCCAGGAAATCCAACAGGATACACCCGG...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR TCA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTTCCTGGCTAACACGGTaGAACCCTATCTCTATTAAA | + |
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Preference number: 4 (lower is better) Translates to: HIPKANPSHLLHNFSIILSWLTR*NPISIK Trigger: TTTAATAGAGATAGGGTTTCACCGTGTTAGCCAGGA...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR TCA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTTTCTCTTCATGGGTGTaGCATTCCTCATCAGAATCA | + |
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Preference number: 4 (lower is better) Translates to: HIPKANPSHLLHNFSIILFSSWV*HSSSES Trigger: TGATTCTGATGAGGAATGTCACACCCATGAAGAGAA...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR GCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAGGCATAATACTTCCATaGGTCACCATGAGAATCATG | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSIGIILP*VTMRIM Trigger: CATGATTCTCATGGTGACGCATGGAAGTATTATGCC...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR GCA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTATTACACAAATCTTCTaGTGGCACAGGAACTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: HIPKANPSHLLHNFSIILITQIF*WHRNFQ Trigger: TTGGAAGTTCCTGTGCCAGCAGAAGATTTGTGTAAT...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR TCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATATCCAGAGTATTTCTTTaGCTTTTCAAGGTCTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSISRVFL*LFKVLQ Trigger: TTGCAAGACCTTGAAAAGTCAAAGAAATACTCTGGA...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR GCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAAGCCAATCCTCGTTTTaGATCCAGTACATTCATAAT | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSISQSSF*IQYIHN Trigger: ATTATGAATGTACTGGATGCAAAACGAGGATTGGCT...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR GCA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATATTGCCTTGTAATTCCTaGCAAGTGTTTTCATCACAT | + |
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Preference number: 4 (lower is better) Translates to: FHHIPKANPSHLLHNFSILPCNS*QVFSSH Trigger: ATGTGATGAAAACACTTGGCAGGAATTACAAGGCAA...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS CCA 90 bp | GGATTCGGTCTGCAGAGTCGCAGACTTTCAAGCCAATCTGGATCTTaGCAAAGCGCCGCCACTTTGGGTACCACATCTCACCAGTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GFGLQSRRLSSQSGS*QSAATLGTTSHQCC Trigger: GCAGCACTGGTGAGATGTGGTACCCAAAGTGGCGGCGCTTTGCCAAGATCCAGATTGGCTTGAAAGTCTGCGACTCTGCAGACCGAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373695.1 ENST00000373696.8 ENST00000471950.1 |
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| CDS CCA 90 bp | GTATCCCGGATTCGGTCTGCAGAGTCGCAGACTTTCAAGCCAATCTaGATCTTGGCAAAGCGCCGCCACTTTGGGTACCACATCTCACCA | + |
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Preference number: 5 (lower is better) Translates to: VSRIRSAESQTFKPI*ILAKRRHFGYHISP Trigger: TGGTGAGATGTGGTACCCAAAGTGGCGGCGCTTTGCCAAGATCCAGATTGGCTTGAAAGTCTGCGACTCTGCAGACCGAATCCGGGATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373695.1 ENST00000373696.8 ENST00000471950.1 |
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| CDS CCA 90 bp | ACTTTTCTCTGGGTTGTCAGAGACCCGGGCACCAAGCGGCAGCAGTaGTCAGGCCGGCTCAAATTACGGAAGAGAAAGGAGAAAGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: TFLWVVRDPGTKRQQ*SGRLKLRKRKEKEN Trigger: GTTCTCTTTCTCCTTTCTCTTCCGTAATTTGAGCCGGCCTGACCACTGCTGCCGCTTGGTGCCCGGGTCTCTGACAACCCAGAGAAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471950.1 |
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| CDS TCA 90 bp | ACAGCAAATGGTCACACGTGGGGCACAATACGGGTCCCATCTTTCTaGGTTAATGGCACCATGACCAGAGACCCCTTGCATTTGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: TANGHTWGTIRVPSF*VNGTMTRDPLHLAQ Trigger: CTGTGCCAAATGCAAGGGGTCTCTGGTCATGGTGCCATTAACTCAGAAAGATGGGACCCGTATTGTGCCCCACGTGTGACCATTTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373695.1 ENST00000373696.8 |
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| CDS CCA 90 bp | TCATGGATACCATCAATCAGCCAGGAGGCAGCATGGCACATTTCATaGATCAAGGTATCCCGGATTCGGTCTGCAGAGTCGCAGACTTTC | + |
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Preference number: 5 (lower is better) Translates to: SWIPSISQEAAWHIS*IKVSRIRSAESQTF Trigger: GAAAGTCTGCGACTCTGCAGACCGAATCCGGGATACCTTGATCCATGAAATGTGCCATGCTGCCTCCTGGCTGATTGATGGTATCCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373695.1 ENST00000373696.8 ENST00000471950.1 |
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| CDS GCA 90 bp | CAGCTCCGGGTGTATCCTGTTGGATTTCCTGGCATAATACTTCCATaGGTCACCATGAGAATCATGGATACCATCAATCAGCCAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: QLRVYPVGFPGIILP*VTMRIMDTINQPGG Trigger: GCCTCCTGGCTGATTGATGGTATCCATGATTCTCATGGTGACGCATGGAAGTATTATGCCAGGAAATCCAACAGGATACACCCGGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373695.1 ENST00000373696.8 ENST00000471950.1 |
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| CDS-3UTR CAA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTGTCCTCCTCCGGCTCTaGCAAGCGGGGCAGCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: HIPKANPSHLLHNFSIILVLLRL*QAGQLF Trigger: AAAGAGCTGCCCCGCTTGCAAGAGCCGGAGGAGGAC...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CAA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTCAAAGCGCCGCCACTTaGGGTACCACATCTCACCAG | + |
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Preference number: 5 (lower is better) Translates to: HIPKANPSHLLHNFSIILQSAAT*GTTSHQ Trigger: CTGGTGAGATGTGGTACCCAAAGTGGCGGCGCTTTG...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CAA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTAGAGACCCCTTGCATTaGGCACAGATGAAGCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: HIPKANPSHLLHNFSIILRDPLH*AQMKRL Trigger: CAGCCGCTTCATCTGTGCCAAATGCAAGGGGTCTCT...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CAA 90 bp | TTTCATCACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATACGGGGCAGCTCTTTTTaGCACCCATCCATGTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: FHHIPKANPSHLLHNFSIRGSSF*HPSMSV Trigger: TACAGACATGGATGGGTGCAAAAAAGAGCTGCCCCG...TATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTGATGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CAA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTAAGCCAATCTGGATCTaGGCAAAGCGCCGCCACTTT | + |
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Preference number: 5 (lower is better) Translates to: HIPKANPSHLLHNFSIILKPIWI*AKRRHF Trigger: AAAGTGGCGGCGCTTTGCCAAGATCCAGATTGGCTT...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CAA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTATGACCAGAGACCCCTaGCATTTGGCACAGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: HIPKANPSHLLHNFSIILMTRDP*HLAQMK Trigger: CTTCATCTGTGCCAAATGCAAGGGGTCTCTGGTCAT...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS-3UTR CAA 90 bp | CACATCCCCAAGGCTAATCCTAGCCATCTCCTGCATAATTTTTCTATAATACTTCTTAAAGCCGAAACTTaGCTCTGCAAAATGAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: HIPKANPSHLLHNFSIILLKAET*LCKMKR Trigger: CCTTTTCATTTTGCAGAGCAAAGTTTCGGCTTTAAG...AAGTATTATAGAAAAATTATGCAGGAGATGGCTAGGATTAGCCTTGGGGATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS CCA 72 bp | TGGGTTGTCAGAGACCCGGGCACCAAGCGGCAGCAGTaGTCAGGCCGGCTCAAATTACGGAAGAGAAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: WVVRDPGTKRQQ*SGRLKLRKRKE Trigger: CTCCTTTCTCTTCCGTAATTTGAGCCGGCCTGACCACTGCTGCCGCTTGGTGCCCGGGTCTCTGACAACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471950.1 |
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| CDS CAA 72 bp | GTTAGCCTTGGGCCCAAAGCAATACTTTTCTCTGGGTaGTCAGAGACCCGGGCACCAAGCGGCAGCAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: VSLGPKAILFSG*SETRAPSGSSG Trigger: ACCACTGCTGCCGCTTGGTGCCCGGGTCTCTGACAACCCAGAGAAAAGTATTGCTTTGGGCCCAAGGCTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471950.1 |
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| CDS CAA 90 bp | CGGATTCGGTCTGCAGAGTCGCAGACTTTCAAGCCAATCTGGATCTaGGCAAAGCGCCGCCACTTTGGGTACCACATCTCACCAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RIRSAESQTFKPIWI*AKRRHFGYHISPVL Trigger: CAGCACTGGTGAGATGTGGTACCCAAAGTGGCGGCGCTTTGCCAAGATCCAGATTGGCTTGAAAGTCTGCGACTCTGCAGACCGAATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373695.1 ENST00000373696.8 ENST00000471950.1 |
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| CDS TCA 72 bp | GGTCACACGTGGGGCACAATACGGGTCCCATCTTTCTaGGTTAATGGCACCATGACCAGAGACCCCTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: GHTWGTIRVPSF*VNGTMTRDPLH Trigger: ATGCAAGGGGTCTCTGGTCATGGTGCCATTAACTCAGAAAGATGGGACCCGTATTGTGCCCCACGTGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373695.1 ENST00000373696.8 |
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| CDS CCA 72 bp | CTGCAGAGTCGCAGACTTTCAAGCCAATCTGGATCTTaGCAAAGCGCCGCCACTTTGGGTACCACATCTCAC | + |
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Preference number: 6 (lower is better) Translates to: LQSRRLSSQSGS*QSAATLGTTSH Trigger: GTGAGATGTGGTACCCAAAGTGGCGGCGCTTTGCCAAGATCCAGATTGGCTTGAAAGTCTGCGACTCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373695.1 ENST00000373696.8 ENST00000471950.1 |
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| CDS CCA 72 bp | ATTCGGTCTGCAGAGTCGCAGACTTTCAAGCCAATCTaGATCTTGGCAAAGCGCCGCCACTTTGGGTACCAC | + |
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Preference number: 6 (lower is better) Translates to: IRSAESQTFKPI*ILAKRRHFGYH Trigger: GTGGTACCCAAAGTGGCGGCGCTTTGCCAAGATCCAGATTGGCTTGAAAGTCTGCGACTCTGCAGACCGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373695.1 ENST00000373696.8 ENST00000471950.1 |
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| CDS CCA 72 bp | CCATCAATCAGCCAGGAGGCAGCATGGCACATTTCATaGATCAAGGTATCCCGGATTCGGTCTGCAGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: PSISQEAAWHIS*IKVSRIRSAES Trigger: CGACTCTGCAGACCGAATCCGGGATACCTTGATCCATGAAATGTGCCATGCTGCCTCCTGGCTGATTGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373695.1 ENST00000373696.8 ENST00000471950.1 |
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| CDS CAA 72 bp | TCAAGCCAATCTGGATCTTGGCAAAGCGCCGCCACTTaGGGTACCACATCTCACCAGTGCTGCATAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSQSGSWQSAAT*GTTSHQCCISQ Trigger: CTGGCTTATGCAGCACTGGTGAGATGTGGTACCCAAAGTGGCGGCGCTTTGCCAAGATCCAGATTGGCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373695.1 ENST00000373696.8 ENST00000471950.1 |
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| CDS CAA 72 bp | TCTGCAGAGTCGCAGACTTTCAAGCCAATCTGGATCTaGGCAAAGCGCCGCCACTTTGGGTACCACATCTCA | + |
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Preference number: 6 (lower is better) Translates to: SAESQTFKPIWI*AKRRHFGYHIS Trigger: TGAGATGTGGTACCCAAAGTGGCGGCGCTTTGCCAAGATCCAGATTGGCTTGAAAGTCTGCGACTCTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373695.1 ENST00000373696.8 ENST00000471950.1 |
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| CDS CAA 90 bp | AAGAATCAGTCACTGCACCTCAGCATCAGCTCTGAGATGTTAGCCTaGGGCCCAAAGCAATACTTTTCTCTGGGTTGTCAGAGACCCGGG | + |
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Preference number: 6 (lower is better) Translates to: KNQSLHLSISSEMLA*GPKQYFSLGCQRPG Trigger: CCCGGGTCTCTGACAACCCAGAGAAAAGTATTGCTTTGGGCCCAAGGCTAACATCTCAGAGCTGATGCTGAGGTGCAGTGACTGATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471950.1 |
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| CDS CAA 72 bp | TCCTCCTCCGGCTCTTGCAAGCGGGGCAGCTCTTTTTaGCACCCATCCATGTCTGTAGTGAAAGACAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SSSGSCKRGSSF*HPSMSVVKDKD Trigger: ATCTTTGTCTTTCACTACAGACATGGATGGGTGCAAAAAAGAGCTGCCCCGCTTGCAAGAGCCGGAGGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS CAA 90 bp | CAATCCTCGTCCTCCTCCGGCTCTTGCAAGCGGGGCAGCTCTTTTTaGCACCCATCCATGTCTGTAGTGAAAGACAAAGATACACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: QSSSSSGSCKRGSSF*HPSMSVVKDKDTLS Trigger: AGAAAGTGTATCTTTGTCTTTCACTACAGACATGGATGGGTGCAAAAAAGAGCTGCCCCGCTTGCAAGAGCCGGAGGAGGACGAGGATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS CCA 72 bp | GAATCATGGATACCATCAATCAGCCAGGAGGCAGCATaGCACATTTCATGGATCAAGGTATCCCGGATTCGG | + |
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Preference number: 6 (lower is better) Translates to: ESWIPSISQEAA*HISWIKVSRIR Trigger: CCGAATCCGGGATACCTTGATCCATGAAATGTGCCATGCTGCCTCCTGGCTGATTGATGGTATCCATGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373695.1 ENST00000373696.8 ENST00000471950.1 |
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| CDS TCA 72 bp | ACAAAAGAATCAGTCACTGCACCTCAGCATCAGCTCTaGGATGTTAGCCTTGGGCCCAAAGCAATACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: TKESVTAPQHQL*DVSLGPKAILF Trigger: GAAAAGTATTGCTTTGGGCCCAAGGCTAACATCTCAGAGCTGATGCTGAGGTGCAGTGACTGATTCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471950.1 |
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| CDS GCA 72 bp | GTGTATCCTGTTGGATTTCCTGGCATAATACTTCCATaGGTCACCATGAGAATCATGGATACCATCAATCAG | + |
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Preference number: 6 (lower is better) Translates to: VYPVGFPGIILP*VTMRIMDTINQ Trigger: CTGATTGATGGTATCCATGATTCTCATGGTGACGCATGGAAGTATTATGCCAGGAAATCCAACAGGATACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373695.1 ENST00000373696.8 ENST00000471950.1 |
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| CDS CCA 72 bp | AATTTTTCTATAATACTTCTGCACATACACAGCAAATaGTCACACGTGGGGCACAATACGGGTCCCATCTTT | + |
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Preference number: 6 (lower is better) Translates to: NFSIILLHIHSK*SHVGHNTGPIF Trigger: AAAGATGGGACCCGTATTGTGCCCCACGTGTGACCATTTGCTGTGTATGTGCAGAAGTATTATAGAAAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373695.1 ENST00000373696.8 |
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| CDS CAA 72 bp | CAGAGACATCTCTACATTTACATTCTGCATTTATCTTaGGGTATCTTCCCCACCTTAAAGCCGAAACTTTGC | + |
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Preference number: 6 (lower is better) Translates to: QRHLYIYILHLS*GIFPTLKPKLC Trigger: GCAAAGTTTCGGCTTTAAGGTGGGGAAGATACCCAAAGATAAATGCAGAATGTAAATGTAGAGATGTCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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| CDS CAA 90 bp | ACTCAAAAGCAGAGACATCTCTACATTTACATTCTGCATTTATCTTaGGGTATCTTCCCCACCTTAAAGCCGAAACTTTGCTCTGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: TQKQRHLYIYILHLS*GIFPTLKPKLCSAK Trigger: TTTTGCAGAGCAAAGTTTCGGCTTTAAGGTGGGGAAGATACCCAAAGATAAATGCAGAATGTAAATGTAGAGATGTCTCTGCTTTTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373695.1 |
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