RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GATA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000179348

Ensembl transcript IDs: ENST00000341105.7, ENST00000430265.6, ENST00000487848.5, ENST00000489987.1, ENST00000492608.1, ENST00000498200.1

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGGCCGAGCCGGGCTGGCAGGAGTGGTGTCGGCCTTCGGGAAATaGTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCG +
Preference number: 1 (lower is better)
Translates to: LGRAGLAGVVSAFGK*WAAKGLVHPSRECP
Trigger: CGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGACACCACTCCTGCCAGCCCGGCTCGGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CCA 90 bp GGCCGAGCCGGGCTGGCAGGAGTGGTGTCGGCCTTCGGGAAATGCTaGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTC +
Preference number: 1 (lower is better)
Translates to: GRAGLAGVVSAFGKC*AAKGLVHPSRECPV
Trigger: GACCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGACACCACTCCTGCCAGCCCGGCTCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR TCA 90 bp TCCTGTGACCCAGCCCTGGCCTGGGAATCTGTGCAGGACCGCCCGTaGTTGTCTCTGCCCTCCAGGGCCTGGCCCGTCAAAGCAGGCACC +
Preference number: 1 (lower is better)
Translates to: SCDPALAWESVQDRP*LSLPSRAWPVKAGT
Trigger: GGTGCCTGCTTTGACGGGCCAGGCCCTGGAGGGCAGAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTCACAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR GCA 90 bp CAGCCCTGGCCTGGGAATCTGTGCAGGACCGCCCGTGATTGTCTCTaGCCTCCAGGGCCTGGCCCGTCAAAGCAGGCACCAGCTCACCCT +
Preference number: 1 (lower is better)
Translates to: QPWPGNLCRTARDCL*PPGPGPSKQAPAHP
Trigger: AGGGTGAGCTGGTGCCTGCTTTGACGGGCCAGGCCCTGGAGGGCAGAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CCA 90 bp CTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCACTTaGTCACTACATCAGCACAATCCTCCTCCTGGGCCAGGGGCCCCT +
Preference number: 1 (lower is better)
Translates to: LAVVLPAATARPYCT*SLHQHNPPPGPGAP
Trigger: AGGGGCCCCTGGCCCAGGAGGAGGATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341105.7
3UTR GCA 90 bp GGAAGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTaGCCCCAGAGCCCTGGCAAGTGGACCCGCCAATCCCGAGGAAGA +
Preference number: 1 (lower is better)
Translates to: GSQRRRGCRLRSPQI*PQSPGKWTRQSRGR
Trigger: TCTTCCTCGGGATTGGCGGGTCCACTTGCCAGGGCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CCA 90 bp CGTCAAAGCAGGCACCAGCTCACCCTCCCTGGGCCGTGGCCACTCTaGCTTTGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGG +
Preference number: 1 (lower is better)
Translates to: RQSRHQLTLPGPWPL*LWLSPAWSSAISER
Trigger: CCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCAAAGCCAGAGTGGCCACGGCCCAGGGAGGGTGAGCTGGTGCCTGCTTTGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CCA 90 bp GTCCTTGTTGTTCTCCAAACAACTGTCCATGCAGGAAACCCCACCTaGGCAGCGGTCAGGTGCGGAGGCAGCCTCTCAGCGGTGGGGAAC +
Preference number: 1 (lower is better)
Translates to: VLVVLQTTVHAGNPT*AAVRCGGSLSAVGN
Trigger: GTTCCCCACCGCTGAGAGGCTGCCTCCGCACCTGACCGCTGCCCAGGTGGGGTTTCCTGCATGGACAGTTGTTTGGAGAACAACAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR GCA 90 bp TTACTTCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTaGACTTGGTCACTACATCAGCACAATCCTCCTCCTGGGCCAGGG +
Preference number: 1 (lower is better)
Translates to: LLLAVVLPAATARPY*TWSLHQHNPPPGPG
Trigger: CCCTGGCCCAGGAGGAGGATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
3UTR CCA 90 bp CCCTGGCAAGTGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTTaGGACAGCTCAGACCACCAAGTCTCCAAGTCCTTGTTAGAAACA +
Preference number: 1 (lower is better)
Translates to: PWQVDPPIPRKNRRT*DSSDHQVSKSLLET
Trigger: TGTTTCTAACAAGGACTTGGAGACTTGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCACTTGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CCA 90 bp TTTCCCCTTTCAAGAAAATGTTGTTTCCTTCCTGTGACCCAGCCCTaGCCTGGGAATCTGTGCAGGACCGCCCGTGATTGTCTCTGCCCT +
Preference number: 1 (lower is better)
Translates to: FPLSRKCCFLPVTQP*PGNLCRTARDCLCP
Trigger: AGGGCAGAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTCACAGGAAGGAAACAACATTTTCTTGAAAGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CCA 90 bp GGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTaGGAGACGTTTCCCCTTTCAAGAAAATGTTGTTTCCTTCCTGTG +
Preference number: 1 (lower is better)
Translates to: GHSHSSFGLKAKGAI*ETFPLSRKCCFLPV
Trigger: CACAGGAAGGAAACAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR GCA 90 bp TGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCCTCCAGGAGAGGGGGTaGTGGGCCGAGCCGGGCTGG +
Preference number: 2 (lower is better)
Translates to: WTRQSRGRTGGLGTAQTTLQERG*WAEPGW
Trigger: CCAGCCCGGCTCGGCCCAGCACCCCCTCTCCTGGAG...GGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp GGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGATGGGCCGAGCCGGGCTaGCAGGAGTGGTGTCGGCCT +
Preference number: 2 (lower is better)
Translates to: GDTVTAASASKPRERSGRWAEPG*QEWCRP
Trigger: AGGCCGACACCACTCCTGCCAGCCCGGCTCGGCCCA...TCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGCAGGAGAGGGGGTGCTaGGCCGAGCCGGGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGQERGC*AEPGWQ
Trigger: CTGCCAGCCCGGCTCGGCCCAGCACCCCCTCTCCTG...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CAA 90 bp TCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCACTaGGTCACTACATCAGCACAATCCTCCTCCTGGGCCAGGGGCCCC +
Preference number: 2 (lower is better)
Translates to: SGRGAPCSDCPPILH*VTTSAQSSSWARGP
Trigger: GGGGCCCCTGGCCCAGGAGGAGGATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341105.7
3UTR-3UTR CCA 90 bp GGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGCTGCTGGCAGGCTGCTaGGCGCCCTCCAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: GSAQPGVRLFQRGKPEEKLLAGC*APSRRG
Trigger: CCCTCTCCTGGAGGGCGCCCAGCAGCCTGCCAGCAG...CTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp GGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACCAGCTCACCCTCCCTaGGCCGTGGCCACTCTGGCT +
Preference number: 2 (lower is better)
Translates to: GDTVTAASASKPRERSGRPAHPP*AVATLA
Trigger: AGCCAGAGTGGCCACGGCCCAGGGAGGGTGAGCTGG...TCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp CCTGTGACCCAGCCCTGGCCTGGGAATCTGTGCAGGACCGCCCGTGATTGTCTCATTCACAGTAACTGCTaGCAGGCTGCTGGGCGCCCT +
Preference number: 2 (lower is better)
Translates to: PVTQPWPGNLCRTARDCLIHSNC*QAAGRP
Trigger: AGGGCGCCCAGCAGCCTGCCAGCAGTTACTGTGAAT...GAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp CAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCTCAGTAAGGGGACACAGTGCAGGAAACCCCACCTaGGCAGCGGTCAGGTGCGGA +
Preference number: 2 (lower is better)
Translates to: QGPPDKTGCGLRSVRGHSAGNPT*AAVRCG
Trigger: TCCGCACCTGACCGCTGCCCAGGTGGGGTTTCCTGC...ACTGTGTCCCCTTACTGAGCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGCTGCCCCCAGAGCCCTaGCAAGTGGACCCGCCAATC +
Preference number: 2 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGLPPEP*QVDPPI
Trigger: GATTGGCGGGTCCACTTGCCAGGGCTCTGGGGGCAG...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp GGCTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGACCCTCCCTGGGCCGTaGCCACTCTGGCTTTGGCTC +
Preference number: 2 (lower is better)
Translates to: GLRSVRGHSHSSFGLKAKTLPGP*PLWLWL
Trigger: GAGCCAAAGCCAGAGTGGCCACGGCCCAGGGAGGGT...CTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp CACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCAGCTCACCCTCCCTaGGCCGTGGCCACTCTGGCT +
Preference number: 2 (lower is better)
Translates to: HSHSSFGLKAKGAIWETFPAHPP*AVATLA
Trigger: AGCCAGAGTGGCCACGGCCCAGGGAGGGTGAGCTGG...AAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR TCA 90 bp GGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGAGAAGAGGGTGCAGGCTaGGGTCCCCACAAATCTGCC +
Preference number: 2 (lower is better)
Translates to: GDTVTAASASKPRERSGREEGAG*GPHKSA
Trigger: GGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTC...TCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR GCA 90 bp CCCGCCCATATTGCACTTGGTCACTACATCAGCACAATCCTCCTCCTGGGCCAGCACCCATCCCGGGAGTaGCCGGTCCTCGACGTCCAT +
Preference number: 2 (lower is better)
Translates to: PAHIALGHYISTILLLGQHPSRE*PVLDVH
Trigger: ATGGACGTCGAGGACCGGGCACTCCCGGGATGGGTG...CTGGCCCAGGAGGAGGATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
3UTR-3UTR GCA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGACACCCATCCCGGGAGTaGCCGGTCCTCGACGTCCAT +
Preference number: 2 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGHPSRE*PVLDVH
Trigger: ATGGACGTCGAGGACCGGGCACTCCCGGGATGGGTG...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGCCGGGCTGGCAGGAGTaGTGTCGGCCTTCGGGAAAT +
Preference number: 2 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGPGWQE*CRPSGN
Trigger: ATTTCCCGAAGGCCGACACCACTCCTGCCAGCCCGG...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp AATAAGTTACTTCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCCTGCCCCCAGAGCCCTaGCAAGTGGACCCGCCAATC +
Preference number: 2 (lower is better)
Translates to: NKLLLAVVLPAATARPYCLPPEP*QVDPPI
Trigger: GATTGGCGGGTCCACTTGCCAGGGCTCTGGGGGCAG...GCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAACTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341105.7
3UTR CAA 90 bp GTTACTTCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATaGCACTTGGTCACTACATCAGCACAATCCTCCTCCTGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: VTSGRGAPCSDCPPI*HLVTTSAQSSSWAR
Trigger: CCTGGCCCAGGAGGAGGATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
3UTR-3UTR GCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCCTCCAGGAGAGGGGGTaGTGGGCCGAGCCGGGCTGG +
Preference number: 2 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRLQERG*WAEPGW
Trigger: CCAGCCCGGCTCGGCCCAGCACCCCCTCTCCTGGAG...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp GGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTCTGCTGGCAGGCTGCTaGGCGCCCTCCAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: GLKAKGAIWETFPLSRKCLLAGC*APSRRG
Trigger: CCCTCTCCTGGAGGGCGCCCAGCAGCCTGCCAGCAG...ACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR GCA 90 bp GTTACTTCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCACTTGAACATTCACAGTAACTaGTGGCAGGCTGCTGGGCGC +
Preference number: 2 (lower is better)
Translates to: VTSGRGAPCSDCPPILHLNIHSN*WQAAGR
Trigger: GCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTT...CAAGTGCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
3UTR-3UTR GCA 90 bp GCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGAAGGTCCCCACAAATCTaGCCCCAGAGCCCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: AQPSLEFGYFREGSQRRRRSPQI*PQSPGK
Trigger: CTTGCCAGGGCTCTGGGGGCAGATTTGTGGGGACCT...TCTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR GCA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGTGGCCTGGGAATCTGTaGAGGACCGCCCGTGATTGT +
Preference number: 2 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGWPGNL*RTARDC
Trigger: ACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCA...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp TCTGGCTTTGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGGGCTGCTAAGGGTTTaGTCCACCCATCCCGGGAGT +
Preference number: 2 (lower is better)
Translates to: SGFGSAQPGVRLFQRGKPGLLRV*STHPGS
Trigger: ACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCC...TGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCAAAGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp AGGACTTGGGACAGCTCAGACCACCAAGTCTCCAAGTCCTTGTTAGAAACAAGACAGGAGAGGGGGTGCTaGGCCGAGCCGGGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: RTWDSSDHQVSKSLLETRQERGC*AEPGWQ
Trigger: CTGCCAGCCCGGCTCGGCCCAGCACCCCCTCTCCTG...TCTTGTTTCTAACAAGGACTTGGAGACTTGGTGGTCTGAGCTGTCCCAAGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CAA 90 bp GCCCTGGCAAGTGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTaGGGACAGCTCAGACCACCAAGTCTCCAAGTCCTTGTTAGAAAC +
Preference number: 2 (lower is better)
Translates to: ALASGPANPEEEPED*GQLRPPSLQVLVRN
Trigger: GTTTCTAACAAGGACTTGGAGACTTGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCACTTGCCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR GCA 90 bp GGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACCTTCTAAAAATGGTTaGCTTCGTCTGTCCCGTCCC +
Preference number: 2 (lower is better)
Translates to: GDTVTAASASKPRERSGRPSKNG*LRLSRP
Trigger: GGGACGGGACAGACGAAGGCAACCATTTTTAGAAGG...TCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp GCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGAGCCTTCGGGAAATGCTaGGCTGCTAAGGGTTTGGTC +
Preference number: 2 (lower is better)
Translates to: AQPSLEFGYFREGSQRRRAFGKC*AAKGLV
Trigger: GACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGC...TCTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp CACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTGCCTTCGGGAAATGCTaGGCTGCTAAGGGTTTGGTC +
Preference number: 2 (lower is better)
Translates to: HSHSSFGLKAKGAIWETFAFGKC*AAKGLV
Trigger: GACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGC...AAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp CAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCTCAGTAAGGGGACACAGTGCAGCCTCTCAGCGGTaGGGAACATTCACAGTAACT +
Preference number: 2 (lower is better)
Translates to: QGPPDKTGCGLRSVRGHSAASQR*GTFTVT
Trigger: AGTTACTGTGAATGTTCCCCACCGCTGAGAGGCTGC...ACTGTGTCCCCTTACTGAGCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR GCA 90 bp GGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGCCTTCTAAAAATGGTTaGCTTCGTCTGTCCCGTCCC +
Preference number: 2 (lower is better)
Translates to: GSAQPGVRLFQRGKPEEKPSKNG*LRLSRP
Trigger: GGGACGGGACAGACGAAGGCAACCATTTTTAGAAGG...CTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp GCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGAGCAGCCTCTCAGCGGTaGGGAACATTCACAGTAACT +
Preference number: 2 (lower is better)
Translates to: AQPSLEFGYFREGSQRRRAASQR*GTFTVT
Trigger: AGTTACTGTGAATGTTCCCCACCGCTGAGAGGCTGC...TCTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCCAGAGCCCTGGCAAGTaGACCCGCCAATCCCGAGGA +
Preference number: 2 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRQSPGK*TRQSRG
Trigger: TCCTCGGGATTGGCGGGTCCACTTGCCAGGGCTCTG...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CCA 90 bp AGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGTTTCCTTCCTGTGACGCAGGAAACCCCACCTaGGCAGCGGTCAGGTGCGGA +
Preference number: 2 (lower is better)
Translates to: SDLGDVSPFKKMLFPSCDAGNPT*AAVRCG
Trigger: TCCGCACCTGACCGCTGCCCAGGTGGGGTTTCCTGC...GTCACAGGAAGGAAACAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR GCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCTGGCCTGGGAATCTGTaGAGGACCGCCCGTGATTGT +
Preference number: 2 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRWPGNL*RTARDC
Trigger: ACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCA...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CAA 90 bp AAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTaGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAA +
Preference number: 2 (lower is better)
Translates to: KRMYLQGPPDKTGCG*RSVRGHSHSSFGLK
Trigger: TTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR TCA 72 bp CCAGCCCTGGCCTGGGAATCTGTGCAGGACCGCCCGTaGTTGTCTCTGCCCTCCAGGGCCTGGCCCGTCAAA +
Preference number: 3 (lower is better)
Translates to: PALAWESVQDRP*LSLPSRAWPVK
Trigger: TTTGACGGGCCAGGCCCTGGAGGGCAGAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR GCA 72 bp GCCGGGCTGGCAGGAGTGGTGTCGGCCTTCGGGAAATaGTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGG +
Preference number: 3 (lower is better)
Translates to: AGLAGVVSAFGK*WAAKGLVHPSR
Trigger: CCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGACACCACTCCTGCCAGCCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR GCA 72 bp CCTGGGAATCTGTGCAGGACCGCCCGTGATTGTCTCTaGCCTCCAGGGCCTGGCCCGTCAAAGCAGGCACCA +
Preference number: 3 (lower is better)
Translates to: PGNLCRTARDCL*PPGPGPSKQAP
Trigger: TGGTGCCTGCTTTGACGGGCCAGGCCCTGGAGGGCAGAGACAATCACGGGCGGTCCTGCACAGATTCCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CCA 72 bp TGTCGGCCTTCGGGAAATGCTGGGCTGCTAAGGGTTTaGTCCACCCATCCCGGGAGTGCCCGGTCCTCGACG +
Preference number: 3 (lower is better)
Translates to: CRPSGNAGLLRV*STHPGSARSST
Trigger: CGTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CCA 72 bp GGGCTGGCAGGAGTGGTGTCGGCCTTCGGGAAATGCTaGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAG +
Preference number: 3 (lower is better)
Translates to: GLAGVVSAFGKC*AAKGLVHPSRE
Trigger: CTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGACACCACTCCTGCCAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR GCA 72 bp AGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTaGCCCCAGAGCCCTGGCAAGTGGACCCGCCAATCC +
Preference number: 3 (lower is better)
Translates to: RRRGCRLRSPQI*PQSPGKWTRQS
Trigger: GGATTGGCGGGTCCACTTGCCAGGGCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CAA 90 bp AGCCTCTCAGCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCTGGGCTGCTAAGGGTTaGGTCCACCCATCCCGGGAG +
Preference number: 3 (lower is better)
Translates to: SLSAVGNIHSNCWQAAGRWAAKG*VHPSRE
Trigger: CTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCA...GCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGCTGAGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CAA 90 bp CCTGTGACCCAGCCCTGGCCTGGGAATCTGTGCAGGACCGCCCGTGATTGTCTCGAAGAACCGGAGGACTaGGGACAGCTCAGACCACCA +
Preference number: 3 (lower is better)
Translates to: PVTQPWPGNLCRTARDCLEEPED*GQLRPP
Trigger: TGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTC...GAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CAA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGTGGGCTGCTAAGGGTTaGGTCCACCCATCCCGGGAG +
Preference number: 3 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGWAAKG*VHPSRE
Trigger: CTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCA...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR GCA 72 bp GCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTaGACTTGGTCACTACATCAGCACAATCCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: AVVLPAATARPY*TWSLHQHNPPP
Trigger: AGGAGGAGGATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
3UTR CCA 72 bp GTGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTTaGGACAGCTCAGACCACCAAGTCTCCAAGTCCTTG +
Preference number: 3 (lower is better)
Translates to: VDPPIPRKNRRT*DSSDHQVSKSL
Trigger: CAAGGACTTGGAGACTTGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CCA 72 bp GTGCTCCCTGCAGCGACTGCCCGCCCATATTGCACTTaGTCACTACATCAGCACAATCCTCCTCCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: VLPAATARPYCT*SLHQHNPPPGP
Trigger: TGGCCCAGGAGGAGGATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGGGCAGTCGCTGCAGGGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
3UTR-3UTR CAA 90 bp AATAAGTTACTTCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCAAGACAGGCTGTGGCTaGCGCTCAGTAAGGGGACAC +
Preference number: 3 (lower is better)
Translates to: NKLLLAVVLPAATARPYCKTGCG*RSVRGH
Trigger: GTGTCCCCTTACTGAGCGCAAGCCACAGCCTGTCTT...GCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAACTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341105.7
3UTR CCA 72 bp TCAAGAAAATGTTGTTTCCTTCCTGTGACCCAGCCCTaGCCTGGGAATCTGTGCAGGACCGCCCGTGATTGT +
Preference number: 3 (lower is better)
Translates to: SRKCCFLPVTQP*PGNLCRTARDC
Trigger: ACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTCACAGGAAGGAAACAACATTTTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CAA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGGAAGAACCGGAGGACTaGGGACAGCTCAGACCACCA +
Preference number: 3 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLEEPED*GQLRPP
Trigger: TGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTC...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CCA 72 bp CACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTaGGAGACGTTTCCCCTTTCAAGAAAATGTTGTTTC +
Preference number: 3 (lower is better)
Translates to: HSSFGLKAKGAI*ETFPLSRKCCF
Trigger: GAAACAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR-3UTR CAA 90 bp TCTGGCTTTGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAATAAAGTTGTCCTTGTaGTTCTCCAAACAACTGTCC +
Preference number: 3 (lower is better)
Translates to: SGFGSAQPGVRLFQRGKPIKLSL*FSKQLS
Trigger: GGACAGTTGTTTGGAGAACAACAAGGACAACTTTAT...TGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCAAAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp GCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCCCTCCAGGACTCCAGGAGAGGGGGTaGTGGGCCGAGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AVGNIHSNCWQAAGRPPGLQERG*WAEPGW
Trigger: CCAGCCCGGCTCGGCCCAGCACCCCCTCTCCTGGAG...TCCTGGAGGGCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CCTGTGACCCAGCCCTGGCCTGGGAATCTGTGCAGGACCGCCCGTGATTGTCTCGTCCCGGGGCGACGCTaGCCTCGCTACCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PVTQPWPGNLCRTARDCLVPGRR*PRYLPG
Trigger: GCCAGGAAGGTAGCGAGGCCAGCGTCGCCCCGGGAC...GAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCCTCACCAGCAGAGCCTaGGCGGCACGCCGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSLTSRA*AARRAA
Trigger: GGCCGCTCGGCGTGCCGCCCAGGCTCTGCTGGTGAG...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp TGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTCCTCGACTGGCGGTCACCATGCTaGACGGGTGGGGGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: CWAAKGLVHPSRECPVLDWRSPC*TGGGGR
Trigger: TCGGCCACCCCCACCCGTCCAGCATGGTGACCGCCA...GTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGCCTCTCAGCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCCAGGAGAGGGGGTGCTaGGCCGAGCCGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLSAVGNIHSNCWQAAGRQERGC*AEPGWQ
Trigger: CTGCCAGCCCGGCTCGGCCCAGCACCCCCTCTCCTG...GCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGCTGAGAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCCCTCCAGGACTGCTGGCAGGCTGCTaGGCGCCCTCCAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: AVGNIHSNCWQAAGRPPGLLAGC*APSRRG
Trigger: CCCTCTCCTGGAGGGCGCCCAGCAGCCTGCCAGCAG...TCCTGGAGGGCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp TGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTCCTCGACTGTGAGTCGGGGTGCTaGGCATTCAGCACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: CWAAKGLVHPSRECPVLDCESGC*AFSTAG
Trigger: CCCGGCCGTGCTGAATGCGCAGCACCCCGACTCACA...GTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTCCTCGACGTCCATCTGTTCGAGCTGGGGGTAGAGTaGGCCTCGGCCTCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KGLVHPSRECPVLDVHLFELGVE*ASASGP
Trigger: AGGGCCCGAGGCCGAGGCGCACTCTACCCCCAGCTC...GAACAGATGGACGTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430265.6
CDS-3UTR CCA 90 bp AGCCTCTCAGCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCCGGGCGGACGGGGCCTaGAGTAGAGCTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLSAVGNIHSNCWQAAGRRADGA*SRAGSR
Trigger: CCTGCTCCCAGCTCTACTCCAGGCCCCGTCCGCCCG...GCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGCTGAGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp AGCCTCTCAGCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCCTGCTGGCAGGCTGCTaGGCGCCCTCCAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLSAVGNIHSNCWQAAGRLLAGC*APSRRG
Trigger: CCCTCTCCTGGAGGGCGCCCAGCAGCCTGCCAGCAG...GCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGCTGAGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTCCTCGACGCAGGAAACCCCACCTaGGCAGCGGTCAGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: CWAAKGLVHPSRECPVLDAGNPT*AAVRCG
Trigger: TCCGCACCTGACCGCTGCCCAGGTGGGGTTTCCTGC...GTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AGCCTCTCAGCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCGCCCGTGATTGTCTCTaGCCTCCAGGGCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SLSAVGNIHSNCWQAAGRARDCL*PPGPGP
Trigger: CGGGCCAGGCCCTGGAGGGCAGAGACAATCACGGGC...GCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGCTGAGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCCAGGGGTTGTGGTGGTaGGCCGCAGCGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSQGLWW*AAAAER
Trigger: CCTCTCTGCCGCTGCGGCCCACCACCACAACCCCTG...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCCCAGCTCACCCTCCCTaGGCCGTGGCCACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSPAHPP*AVATLA
Trigger: AGCCAGAGTGGCCACGGCCCAGGGAGGGTGAGCTGG...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGCCTCTCAGCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCCTGCCCTCCAGGGCCTaGCCCGTCAAAGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: SLSAVGNIHSNCWQAAGRLPSRA*PVKAGT
Trigger: GGTGCCTGCTTTGACGGGCCAGGCCCTGGAGGGCAG...GCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGCTGAGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCCCTCCAGGAGACCCAGCCCTGGCCTaGGAATCTGTGCAGGACCGC +
Preference number: 4 (lower is better)
Translates to: AVGNIHSNCWQAAGRPPGDPALA*ESVQDR
Trigger: GCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTC...TCCTGGAGGGCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCAAGTCTGGCCACACGCAGCCGTaGGGAGGGGAGGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: RQSRGRTGGLGTAQTTKSGHTQP*GGEGLG
Trigger: GCCGAGTCCCTCCCCTCCCCACGGCTGCGTGTGGCC...AGACTTGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430265.6
3UTR CAA 72 bp GTGTCGGCCTTCGGGAAATGCTGGGCTGCTAAGGGTTaGGTCCACCCATCCCGGGAGTGCCCGGTCCTCGAC +
Preference number: 4 (lower is better)
Translates to: VSAFGKCWAAKG*VHPSRECPVLD
Trigger: GTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp CCTGTGACCCAGCCCTGGCCTGGGAATCTGTGCAGGACCGCCCGTGATTGTCTCGGCAAACCCGGGCTGTaGAACAAGTGTGGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: PVTQPWPGNLCRTARDCLGKPGL*NKCGRH
Trigger: GTGCCGCCCACACTTGTTGCACAGCCCGGGTTTGCC...GAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGACTCCAGGAGAGGGGGTaGTGGGCCGAGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGLQERG*WAEPGW
Trigger: CCAGCCCGGCTCGGCCCAGCACCCCCTCTCCTGGAG...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GGCTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGCCGCTTTTGTCCGCCTaGTGGGCGACGGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GLRSVRGHSHSSFGLKAKPLLSA*WATGPC
Trigger: GCAGGGCCCCGTCGCCCACCAGGCGGACAAAAGCGG...CTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp CACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTGACCTGGGCGCGGGGTaGCGGCGCTCACCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HSHSSFGLKAKGAIWETFDLGAG*RRSPAE
Trigger: CTCTGCTGGTGAGCGCCGCCACCCCGCGCCCAGGTC...AAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp GGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGTGTGGGCGGCACATCTaGCCTCCGGTCAGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GSAQPGVRLFQRGKPEEKCGRHI*PPVRRA
Trigger: CGCCCGCCTGACCGGAGGCCAGATGTGCCGCCCACA...CTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TCTGGCTTTGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCACAGGAGAGGGGGTGCTaGGCCGAGCCGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SGFGSAQPGVRLFQRGKPQERGC*AEPGWQ
Trigger: CTGCCAGCCCGGCTCGGCCCAGCACCCCCTCTCCTG...TGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCAAAGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTCCTCGACGTCCATCTGTTCCTGCCCCCAGAGCCCTaGCAAGTGGACCCGCCAATC +
Preference number: 4 (lower is better)
Translates to: KGLVHPSRECPVLDVHLFLPPEP*QVDPPI
Trigger: GATTGGCGGGTCCACTTGCCAGGGCTCTGGGGGCAG...GAACAGATGGACGTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TCGGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGGACACAGCCTCTCCCTaGGTCCTGGTCCTGACCTGC +
Preference number: 4 (lower is better)
Translates to: SGNAGLLRVWSTHPGSARDTASP*VLVLTC
Trigger: GCAGGTCAGGACCAGGACCCAGGGAGAGGCTGTGTC...CCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCAGCACGTCCGGAGGCTaGCGGGGCTTACAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSSTSGG*RGLQGR
Trigger: CCTACCCTGTAAGCCCCGCCAGCCTCCGGACGTGCT...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430265.6
CDS-3UTR GCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCGGTGGAAGAGTCCGCTaGTGTAGTCGTGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSGGRVR*CSRGQP
Trigger: CGGCTGCCCACGACTACAGCAGCGGACTCTTCCACC...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp GTGGTGTCGGCCTTCGGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCACCCATCCCGGGAGTaGCCGGTCCTCGACGTCCAT +
Preference number: 4 (lower is better)
Translates to: VVSAFGKCWAAKGLVHPSHPSRE*PVLDVH
Trigger: ATGGACGTCGAGGACCGGGCACTCCCGGGATGGGTG...GGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGACACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGCCGAGCGGCCGCATaGTGTTCAGCGGACCGCTTT +
Preference number: 4 (lower is better)
Translates to: GDTVTAASASKPRERSGRRRAAA*CSADRF
Trigger: AAAGCGGTCCGCTGAACACCATGCGGCCGCTCGGCG...TCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGACGGCGGCTCAGGGTCTaGGTGCAGACGGCAACGGCC +
Preference number: 4 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGRRLRV*VQTATA
Trigger: GGCCGTTGCCGTCTGCACCCAGACCCTGAGCCGCCG...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGATGTGGGCGGCACATCTaGCCTCCGGTCAGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGCGRHI*PPVRRA
Trigger: CGCCCGCCTGACCGGAGGCCAGATGTGCCGCCCACA...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GGCTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGCAGGGGTTGTGGTGGTaGGCCGCAGCGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GLRSVRGHSHSSFGLKAKQGLWW*AAAAER
Trigger: CCTCTCTGCCGCTGCGGCCCACCACCACAACCCCTG...CTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCAGGTGGGAGCCAGAGTaGGCTGCTGTAGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: WTRQSRGRTGGLGTAQTTRWEPE*AAVGVR
Trigger: CCTCACCCCTACAGCAGCCCACTCTGGCTCCCACCT...GGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTCCTCGACGTCCATCTGTTCCTGAAGGGCGGGAGGTaGCCCACAGGTGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: KGLVHPSRECPVLDVHLFLKGGR*PTGAMC
Trigger: ACACATGGCACCTGTGGGCCACCTCCCGCCCTTCAG...GAACAGATGGACGTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGAGGCTGGAGGAGGGGTaGATGGGCGTCGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GSAQPGVRLFQRGKPEEKRLEEG*MGVGVG
Trigger: GCCCACTCCGACGCCCATCCACCCCTCCTCCAGCCT...CTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCCCGGGCTGGCAGGAGTaGTGTCGGCCTTCGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSPGWQE*CRPSGN
Trigger: ATTTCCCGAAGGCCGACACCACTCCTGCCAGCCCGG...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AATAAGTTACTTCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCTGGGCCGAGCCGGGCTaGCAGGAGTGGTGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: NKLLLAVVLPAATARPYCWAEPG*QEWCRP
Trigger: AGGCCGACACCACTCCTGCCAGCCCGGCTCGGCCCA...GCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAACTTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp TGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCCAGAGCCCTGGCAAGTaGACCCGCCAATCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: WTRQSRGRTGGLGTAQTTQSPGK*TRQSRG
Trigger: TCCTCGGGATTGGCGGGTCCACTTGCCAGGGCTCTG...GGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCTCAGTAAGGGGACACAGTCTGCCCTCCAGGGCCTaGCCCGTCAAAGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: QGPPDKTGCGLRSVRGHSLPSRA*PVKAGT
Trigger: GGTGCCTGCTTTGACGGGCCAGGCCCTGGAGGGCAG...ACTGTGTCCCCTTACTGAGCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp GCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCCCTCCAGGACCCTGCGAGTCGAGGTaGTTGAAGAAGACGTCCACC +
Preference number: 4 (lower is better)
Translates to: AVGNIHSNCWQAAGRPPGPCESR*LKKTST
Trigger: GGTGGACGTCTTCTTCAATCACCTCGACTCGCAGGG...TCCTGGAGGGCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp CGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCAAGTCTAGGGCCTCCAGCAGCTaGGGGGTGCAGTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: RQSRGRTGGLGTAQTTKSRASSS*GVQWRL
Trigger: AAGACGCCACTGCACCCCTCAGCTGCTGGAGGCCCT...AGACTTGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp CAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCTCAGTAAGGGGACACAGTAGGGCCTCCAGCAGCTaGGGGGTGCAGTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: QGPPDKTGCGLRSVRGHSRASSS*GVQWRL
Trigger: AAGACGCCACTGCACCCCTCAGCTGCTGGAGGCCCT...ACTGTGTCCCCTTACTGAGCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp AATAAGTTACTTCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCTGTGTCCGGAGTGGCTaGAGGGCGGGAGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: NKLLLAVVLPAATARPYCCVRSG*RAGGGP
Trigger: TGGGCCACCTCCCGCCCTTCAGCCACTCCGGACACA...GCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAACTTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR GCA 90 bp TGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGGCTCAGGGTCTGGGTaGAGACGGCAACGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: WLSPAWSSAISEREARGEGSGSG*RRQRPE
Trigger: CTCGGGCCGTTGCCGTCTGCACCCAGACCCTGAGCC...TTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR GCA 90 bp CAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCTCAGTAAGGGGACACAGTTGTGAGTCGGGGTGCTaGGCATTCAGCACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QGPPDKTGCGLRSVRGHSCESGC*AFSTAG
Trigger: CCCGGCCGTGCTGAATGCGCAGCACCCCGACTCACA...ACTGTGTCCCCTTACTGAGCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp TCGGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGCTGGGCGCAGGGGACTaGCACTTTCCATCTTCATGC +
Preference number: 4 (lower is better)
Translates to: SGNAGLLRVWSTHPGSARLGAGD*HFPSSC
Trigger: GCATGAAGATGGAAAGTGGCAGTCCCCTGCGCCCAG...CCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGGAGGTGGCCCACAGGTaGCATGTGTCCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGEVAHR*HVSSQG
Trigger: GCCCTGGCTGGACACATGGCACCTGTGGGCCACCTC...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AGCCTCTCAGCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCAGGTCCCCACAAATCTaGCCCCAGAGCCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SLSAVGNIHSNCWQAAGRRSPQI*PQSPGK
Trigger: CTTGCCAGGGCTCTGGGGGCAGATTTGTGGGGACCT...GCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGCTGAGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCAGGTCCCCACAAATCTaGCCCCAGAGCCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSRSPQI*PQSPGK
Trigger: CTTGCCAGGGCTCTGGGGGCAGATTTGTGGGGACCT...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp TCGGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTGGCCTGGGAATCTGTaGAGGACCGCCCGTGATTGT +
Preference number: 4 (lower is better)
Translates to: SGNAGLLRVWSTHPGSARWPGNL*RTARDC
Trigger: ACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCA...CCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCGTCCTGGTCCTGACCTaGCCCCAACTCCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSVLVLT*PQLLPS
Trigger: TGAAGGCAGGAGTTGGGGGCAGGTCAGGACCAGGAC...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp TGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTCCTCGACAGACACTTCTTTGGGTaGCGTGGGTGGGAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: CWAAKGLVHPSRECPVLDRHFFG*RGWEAE
Trigger: TTCGGCTTCCCACCCACGCCACCCAAAGAAGTGTCT...GTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGAAGGCTGGAGGAGGGGTaGATGGGCGTCGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: AQPSLEFGYFREGSQRRRRLEEG*MGVGVG
Trigger: GCCCACTCCGACGCCCATCCACCCCTCCTCCAGCCT...TCTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GGCTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGACCATGCTGGACGGGTaGGGGTGGCCGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GLRSVRGHSHSSFGLKAKTMLDG*GWPKER
Trigger: CCTCTCCTTCGGCCACCCCCACCCGTCCAGCATGGT...CTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCTCAGTAAGGGGACACAGTGACCCAGCCCTGGCCTaGGAATCTGTGCAGGACCGC +
Preference number: 4 (lower is better)
Translates to: QGPPDKTGCGLRSVRGHSDPALA*ESVQDR
Trigger: GCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTC...ACTGTGTCCCCTTACTGAGCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTCCTCGACGCCAAGGGAGCGATCTaGGAGACGTTTCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: CWAAKGLVHPSRECPVLDAKGAI*ETFPLS
Trigger: TGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGC...GTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp TCGGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGGCGAGTCGAGGTGATTaGAGAAGACGTCCACCTCGT +
Preference number: 4 (lower is better)
Translates to: SGNAGLLRVWSTHPGSARASRGD*RRRPPR
Trigger: ACGAGGTGGACGTCTTCTTCAATCACCTCGACTCGC...CCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp GCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGAGTGCAGGACCGCCCGTaGTTGTCTCTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AQPSLEFGYFREGSQRRRVQDRP*LSLPSR
Trigger: CCTGGAGGGCAGAGACAATCACGGGCGGTCCTGCAC...TCTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGTGCAGGACCGCCCGTaGTTGTCTCTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGVQDRP*LSLPSR
Trigger: CCTGGAGGGCAGAGACAATCACGGGCGGTCCTGCAC...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp GCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGACAGAGAGGGCTGCTTTaGCCCCGTCCAGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AQPSLEFGYFREGSQRRRQRGLL*PRPARA
Trigger: TGCCCTGGCTGGACGGGGGCAAAGCAGCCCTCTCTG...TCTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AATAAGTTACTTCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCAGCGGCAGAGAGGGCTaGTTTGCCCCCGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NKLLLAVVLPAATARPYCSGREG*FAPVQP
Trigger: TGGCTGGACGGGGGCAAAGCAGCCCTCTCTGCCGCT...GCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAACTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR GCA 90 bp TCTGGCTTTGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAAGCGGCAGAGAGGGCTaGTTTGCCCCCGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SGFGSAQPGVRLFQRGKPSGREG*FAPVQP
Trigger: TGGCTGGACGGGGGCAAAGCAGCCCTCTCTGCCGCT...TGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCAAAGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTCCTCGACGTCCATCTGTTCTGGCCTGGGAATCTGTaGAGGACCGCCCGTGATTGT +
Preference number: 4 (lower is better)
Translates to: KGLVHPSRECPVLDVHLFWPGNL*RTARDC
Trigger: ACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCA...GAACAGATGGACGTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGGTGGGAGCCAGAGTaGGCTGCTGTAGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGRWEPE*AAVGVR
Trigger: CCTCACCCCTACAGCAGCCCACTCTGGCTCCCACCT...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CCTGTGACCCAGCCCTGGCCTGGGAATCTGTGCAGGACCGCCCGTGATTGTCTCCTTCTTTGGGTGGCGTaGGTGGGAAGCCGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: PVTQPWPGNLCRTARDCLLLWVA*VGSRKG
Trigger: ACCTTTTCGGCTTCCCACCCACGCCACCCAAAGAAG...GAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCAGGAAACCCCACCTaGGCAGCGGTCAGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGAGNPT*AAVRCG
Trigger: TCCGCACCTGACCGCTGCCCAGGTGGGGTTTCCTGC...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAACTGCCCCCAGAGCCCTaGCAAGTGGACCCGCCAATC +
Preference number: 4 (lower is better)
Translates to: WLSPAWSSAISEREARGELPPEP*QVDPPI
Trigger: GATTGGCGGGTCCACTTGCCAGGGCTCTGGGGGCAG...TTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CAA 72 bp GGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCACTaGGTCACTACATCAGCACAATCCTCCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GAPCSDCPPILH*VTTSAQSSSWA
Trigger: GGCCCAGGAGGAGGATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGGGCAGTCGCTGCAGGGAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
3UTR CAA 72 bp GGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATaGCACTTGGTCACTACATCAGCACAATCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRGAPCSDCPPI*HLVTTSAQSSS
Trigger: GGAGGAGGATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR TCA 90 bp GGCTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGCCAGGGCAGCTGCACTaGAGGGGGATGACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GLRSVRGHSHSSFGLKAKPGQLH*RGMTSP
Trigger: AGGAGAAGTCATCCCCCTTCAGTGCAGCTGCCCTGG...CTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp CGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCAAGTCTGAAGAGGGTGCAGGCTaGGGTCCCCACAAATCTGCC +
Preference number: 4 (lower is better)
Translates to: RQSRGRTGGLGTAQTTKSEEGAG*GPHKSA
Trigger: GGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTC...AGACTTGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGGAAGAGGGTGCAGGCTaGGGTCCCCACAAATCTGCC +
Preference number: 4 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGEEGAG*GPHKSA
Trigger: GGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTC...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGATGGTGTGAGTCGGGGTaGTGCGCATTCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGWCESG*CAFSTA
Trigger: GGCCGTGCTGAATGCGCAGCACCCCGACTCACACCA...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCTGGCATAGTAGGGGTTaGCCTGCGAGTCGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSWHSRG*PASRGD
Trigger: ATCACCTCGACTCGCAGGGCAACCCCTACTATGCCA...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGCCAGCAGCTGAGGGGTaGAGTGGCGTCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGPAAEG*SGVLEK
Trigger: CTTCTCCAAGACGCCACTGCACCCCTCAGCTGCTGG...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp CACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTGGTGGAAGAGTCCGCTaGTGTAGTCGTGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: HSHSSFGLKAKGAIWETFGGRVR*CSRGQP
Trigger: CGGCTGCCCACGACTACAGCAGCGGACTCTTCCACC...AAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp GCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGATACTTCTGGCCGTGGTaGTCCCTGCAGCGACTGCCC +
Preference number: 4 (lower is better)
Translates to: AQPSLEFGYFREGSQRRRYFWPW*SLQRLP
Trigger: GGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTA...TCTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp GCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGAGCCTCGCTACCTTCCTaGCGCTCACGCTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: AQPSLEFGYFREGSQRRRASLPS*RSRCLS
Trigger: AGAGAGGCAGCGTGAGCGCCAGGAAGGTAGCGAGGC...TCTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp GGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTCGGCGGCTCAGGGTCTaGGTGCAGACGGCAACGGCC +
Preference number: 4 (lower is better)
Translates to: GLKAKGAIWETFPLSRKCRRLRV*VQTATA
Trigger: GGCCGTTGCCGTCTGCACCCAGACCCTGAGCCGCCG...ACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AATAAGTTACTTCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCGCGCGTGAGCGGGGTTaGCATAGTAGGGGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: NKLLLAVVLPAATARPYCARERG*HSRGCP
Trigger: AGGGCAACCCCTACTATGCCAACCCCGCTCACGCGC...GCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAACTTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGCGTGAGCGGGGTTaGCATAGTAGGGGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGARERG*HSRGCP
Trigger: AGGGCAACCCCTACTATGCCAACCCCGCTCACGCGC...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CCCGCCCATATTGCACTTGGTCACTACATCAGCACAATCCTCCTCCTGGGCCAGGGTGCAGTGGCGTCTTaGAGAAGGGGCTCACGGTCC +
Preference number: 4 (lower is better)
Translates to: PAHIALGHYISTILLLGQGAVAS*RRGSRS
Trigger: GGACCGTGAGCCCCTTCTCCAAGACGCCACTGCACC...CTGGCCCAGGAGGAGGATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp GGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGGGGAAGCCGAAAAGGTaGGAGCCAGAGTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSAQPGVRLFQRGKPEEKGKPKR*EPEWAA
Trigger: AGCAGCCCACTCTGGCTCCCACCTTTTCGGCTTCCC...CTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCCTTCTTTGGGTGGCGTaGGTGGGAAGCCGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: WTRQSRGRTGGLGTAQTTLLWVA*VGSRKG
Trigger: ACCTTTTCGGCTTCCCACCCACGCCACCCAAAGAAG...GGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCTCCGTCAGTGACACCTaGTACTTGACGCCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSSVSDT*YLTPSL
Trigger: CAAGGACGGCGTCAAGTACCAGGTGTCACTGACGGA...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CCCGCCCATATTGCACTTGGTCACTACATCAGCACAATCCTCCTCCTGGGCCAGGGATGGGCGTCGGAGTaGGCAGGATGTGTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: PAHIALGHYISTILLLGQGWASE*AGCVRS
Trigger: ACTCCGGACACATCCTGCCCACTCCGACGCCCATCC...CTGGCCCAGGAGGAGGATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp GGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGCTGTTCCCTAGCCCATaGCGGTCACCATGCTGGACG +
Preference number: 4 (lower is better)
Translates to: GSAQPGVRLFQRGKPEEKLFPSP*RSPCWT
Trigger: CGTCCAGCATGGTGACCGCCATGGGCTAGGGAACAG...CTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCTCAGTAAGGGGACACAGTGGGCTGCTAAGGGTTTaGTCCACCCATCCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: QGPPDKTGCGLRSVRGHSGLLRV*STHPGS
Trigger: ACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCC...ACTGTGTCCCCTTACTGAGCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AATAAGTTACTTCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCCCGGGCTGGCAGGAGTaGTGTCGGCCTTCGGGAAAT +
Preference number: 4 (lower is better)
Translates to: NKLLLAVVLPAATARPYCPGWQE*CRPSGN
Trigger: ATTTCCCGAAGGCCGACACCACTCCTGCCAGCCCGG...GCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAACTTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp TCGGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGAAGAACCGGAGGACTTaGGACAGCTCAGACCACCAA +
Preference number: 4 (lower is better)
Translates to: SGNAGLLRVWSTHPGSARKNRRT*DSSDHQ
Trigger: TTGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTT...CCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp GGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGAGCGAGTCGAGGTGATTaGAGAAGACGTCCACCTCGT +
Preference number: 4 (lower is better)
Translates to: GDTVTAASASKPRERSGRASRGD*RRRPPR
Trigger: ACGAGGTGGACGTCTTCTTCAATCACCTCGACTCGC...TCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTGGTGAGGGAGGCCACTaGGCTCCCGCTGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVGEGGH*APAASP
Trigger: GGGGGAGGCAGCGGGAGCTCAGTGGCCTCCCTCACC...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp CGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCAAGTCTGTGACACCTGGTACTTaGCGCCGTCCTTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RQSRGRTGGLGTAQTTKSVTPGT*RRPCPL
Trigger: GAGAGGACAAGGACGGCGTCAAGTACCAGGTGTCAC...AGACTTGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp GTGGTGTCGGCCTTCGGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCTCCTGCATGCACTTTaGCAGCTCCTCGAAGCACTC +
Preference number: 4 (lower is better)
Translates to: VVSAFGKCWAAKGLVHPSLLHAL*QLLEAL
Trigger: GAGTGCTTCGAGGAGCTGTCAAAGTGCATGCAGGAG...GGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGACACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp GCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGACCAGGGCAGCTGCACTaGAGGGGGATGACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AQPSLEFGYFREGSQRRRPGQLH*RGMTSP
Trigger: AGGAGAAGTCATCCCCCTTCAGTGCAGCTGCCCTGG...TCTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp GTGGTGTCGGCCTTCGGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCAGGAGGCGAGGGGGTTaGAGGGTTAGCAGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: VVSAFGKCWAAKGLVHPSRRRGG*RVSRKR
Trigger: CCTTTTTCTGCTAACCCTTCAACCCCCTCGCCTCCT...GGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGACACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGACCAGCAGCTGAGGGGTaGAGTGGCGTCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGPAAEG*SGVLEK
Trigger: CTTCTCCAAGACGCCACTGCACCCCTCAGCTGCTGG...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGACGAGCCTTGCTGCGCTaGTTAGGGGTGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGRALLR*LGVKLE
Trigger: CTCCAGCTTCACCCCTAAGCAGCGCAGCAAGGCTCG...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp TGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAACGAGCCTTGCTGCGCTaGTTAGGGGTGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: WLSPAWSSAISEREARGERALLR*LGVKLE
Trigger: CTCCAGCTTCACCCCTAAGCAGCGCAGCAAGGCTCG...TTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TCTGGCTTTGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGGGGCCCTGCTAGGATaGATGTGGCGGCAGGCAATA +
Preference number: 4 (lower is better)
Translates to: SGFGSAQPGVRLFQRGKPGALLG*MWRQAI
Trigger: TATTGCCTGCCGCCACATCCATCCTAGCAGGGCCCC...TGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCAAAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp TGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGGGAAGCCGAAAAGGTaGGAGCCAGAGTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: WLSPAWSSAISEREARGEGKPKR*EPEWAA
Trigger: AGCAGCCCACTCTGGCTCCCACCTTTTCGGCTTCCC...TTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGACTGTTCCCTAGCCCATaGCGGTCACCATGCTGGACG +
Preference number: 4 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGLFPSP*RSPCWT
Trigger: CGTCCAGCATGGTGACCGCCATGGGCTAGGGAACAG...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTCCTCGACGTCCATCTGTTCTTCGGCGCCATAAGGTaGTGGTTGTCGTCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KGLVHPSRECPVLDVHLFFGAIR*WLSSVF
Trigger: GAAGACTGACGACAACCACCACCTTATGGCGCCGAA...GAACAGATGGACGTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430265.6
CDS-3UTR TCA 90 bp CACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCTGCGAGTCGAGGTaGTTGAAGAAGACGTCCACC +
Preference number: 4 (lower is better)
Translates to: HSHSSFGLKAKGAIWETFPCESR*LKKTST
Trigger: GGTGGACGTCTTCTTCAATCACCTCGACTCGCAGGG...AAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCTGTGTCCGGAGTGGCTaGAGGGCGGGAGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRCVRSG*RAGGGP
Trigger: TGGGCCACCTCCCGCCCTTCAGCCACTCCGGACACA...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp GGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTCACCCATCCCGGGAGTaGCCGGTCCTCGACGTCCAT +
Preference number: 4 (lower is better)
Translates to: GLKAKGAIWETFPLSRKCHPSRE*PVLDVH
Trigger: ATGGACGTCGAGGACCGGGCACTCCCGGGATGGGTG...ACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGTCGGCCTTCGGGAAATaGTGGGCTGCTAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGSAFGK*WAAKGL
Trigger: CAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGA...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp CGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCAAGTCTAACATTCACAGTAACTaGTGGCAGGCTGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: RQSRGRTGGLGTAQTTKSNIHSN*WQAAGR
Trigger: GCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTT...AGACTTGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGGCCCGTGATTGTCTCTaGCCTCCAGGGCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLARDCL*PPGPGP
Trigger: CGGGCCAGGCCCTGGAGGGCAGAGACAATCACGGGC...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCGTCCAGGGGTTGTGGTaGTGGGCCGCAGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRVQGLW*WAAAAE
Trigger: CTCTGCCGCTGCGGCCCACCACCACAACCCCTGGAC...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGGTCCAGGGGTTGTGGTaGTGGGCCGCAGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLVQGLW*WAAAAE
Trigger: CTCTGCCGCTGCGGCCCACCACCACAACCCCTGGAC...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TCTGGCTTTGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCATTTGGGTGGCGTGGGTaGGAAGCCGAAAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SGFGSAQPGVRLFQRGKPFGWRG*EAEKVG
Trigger: TCCCACCTTTTCGGCTTCCCACCCACGCCACCCAAA...TGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCAAAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGACAGGAGACACTTCTTTaGGTGGCGTGGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: AQPSLEFGYFREGSQRRRQETLL*VAWVGS
Trigger: GCTTCCCACCCACGCCACCCAAAGAAGTGTCTCCTG...TCTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGGCCTTCGGGAAATGCTaGGCTGCTAAGGGTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGAFGKC*AAKGLV
Trigger: GACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGC...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTTGGGCCGAGCCGGGCTaGCAGGAGTGGTGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVWAEPG*QEWCRP
Trigger: AGGCCGACACCACTCCTGCCAGCCCGGCTCGGCCCA...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTATTCACAGTAACTGCTaGCAGGCTGCTGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: HSHSSFGLKAKGAIWETFIHSNC*QAAGRP
Trigger: AGGGCGCCCAGCAGCCTGCCAGCAGTTACTGTGAAT...AAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAATTCACAGTAACTGCTaGCAGGCTGCTGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: WLSPAWSSAISEREARGEIHSNC*QAAGRP
Trigger: AGGGCGCCCAGCAGCCTGCCAGCAGTTACTGTGAAT...TTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCGGGCCGTGGCCACTCTaGCTTTGGCTCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRGPWPL*LWLSPA
Trigger: GGCTGGGCTGAGCCAAAGCCAGAGTGGCCACGGCCC...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
3UTR CAA 72 bp AGTGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTaGGGACAGCTCAGACCACCAAGTCTCCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SGPANPEEEPED*GQLRPPSLQVL
Trigger: AAGGACTTGGAGACTTGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp CACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTTGGCATAGTAGGGGTTaGCCTGCGAGTCGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: HSHSSFGLKAKGAIWETFWHSRG*PASRGD
Trigger: ATCACCTCGACTCGCAGGGCAACCCCTACTATGCCA...AAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCCAGAGAGGGCTGCTTTaGCCCCGTCCAGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRQRGLL*PRPARA
Trigger: TGCCCTGGCTGGACGGGGGCAAAGCAGCCCTCTCTG...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AGCCTCTCAGCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCCACTTTCCATCTTCATaGTCTCCGTCAGTGACACCT +
Preference number: 4 (lower is better)
Translates to: SLSAVGNIHSNCWQAAGRHFPSS*SPSVTP
Trigger: AGGTGTCACTGACGGAGAGCATGAAGATGGAAAGTG...GCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGCTGAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp GTGGTGTCGGCCTTCGGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCACTCCGCCCCTTTCTTaGTCTTCTTGGACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VVSAFGKCWAAKGLVHPSTPPLS*SSWTCW
Trigger: CCAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGT...GGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCATGACTTCTCCTGCATaGACTTTGACAGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSMTSPA*TLTAPR
Trigger: TCGAGGAGCTGTCAAAGTGCATGCAGGAGAAGTCAT...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGGGGGATGACTTCTCCTaGATGCACTTTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGGDDFS*MHFDSS
Trigger: GGAGCTGTCAAAGTGCATGCAGGAGAAGTCATCCCC...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTGGCCGTGGTGCTCCCTaGAGCGACTGCCCGCCCATA +
Preference number: 4 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVGRGAP*SDCPPI
Trigger: TATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCC...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR GCA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGGGCTCAGGGTCTGGGTaGAGACGGCAACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLGSGSG*RRQRPH
Trigger: GTGTGGCCGTTGCCGTCTGCACCCAGACCCTGAGCC...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430265.6
CDS-3UTR CCA 90 bp AATAAGTTACTTCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCAGACACTTCTTTGGGTaGCGTGGGTGGGAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: NKLLLAVVLPAATARPYCRHFFG*RGWEAE
Trigger: TTCGGCTTCCCACCCACGCCACCCAAAGAAGTGTCT...GCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAACTTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp TCTGGCTTTGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCATCCGTCAGTGACACCTaGTACTTGACGCCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SGFGSAQPGVRLFQRGKPSVSDT*YLTPSL
Trigger: CAAGGACGGCGTCAAGTACCAGGTGTCACTGACGGA...TGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCAAAGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAATGGTGTGTAGCAGGCTaGGTGCCCATAGTAGCTAGG +
Preference number: 4 (lower is better)
Translates to: WLSPAWSSAISEREARGEWCVAG*VPIVAR
Trigger: CCTAGCTACTATGGGCACCCAGCCTGCTACACACCA...TTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCTCTTCTTGGACTTGTTaGACATCTTCCGGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSSSWTC*TSSGSE
Trigger: CTCGGAACCGGAAGATGTCCAACAAGTCCAAGAAGA...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTTGGCGGTCACCATGCTaGACGGGTGGGGGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVWRSPC*TGGGGR
Trigger: TCGGCCACCCCCACCCGTCCAGCATGGTGACCGCCA...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GGCTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGCAGCCTCTCAGCGGTaGGGAACATTCACAGTAACT +
Preference number: 4 (lower is better)
Translates to: GLRSVRGHSHSSFGLKAKAASQR*GTFTVT
Trigger: AGTTACTGTGAATGTTCCCCACCGCTGAGAGGCTGC...CTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGACCCTCCCTGGGCCGTaGCCACTCTGGCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLTLPGP*PLWLWL
Trigger: GAGCCAAAGCCAGAGTGGCCACGGCCCAGGGAGGGT...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TCTGGCTTTGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGCCAAGGGAGCGATCTaGGAGACGTTTCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SGFGSAQPGVRLFQRGKPAKGAI*ETFPLS
Trigger: TGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGC...TGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCAAAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp TGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCTATACAGCTGTACCTTaGGAAGGATCCAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: WTRQSRGRTGGLGTAQTTYTAVP*EGSRQP
Trigger: TGGCTGTCTGGATCCTTCCCAAGGTACAGCTGTATA...GGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR GCA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGCCTTCTAAAAATGGTTaGCTTCGTCTGTCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGPSKNG*LRLSRP
Trigger: GGGACGGGACAGACGAAGGCAACCATTTTTAGAAGG...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCTGCTAGGATGGATGTaGCGGCAGGCAATAGACAGA +
Preference number: 4 (lower is better)
Translates to: HSHSSFGLKAKGAIWETFLLGWM*RQAIDR
Trigger: TCTGTCTATTGCCTGCCGCCACATCCATCCTAGCAG...AAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCGGTGCAGTGGCGTCTTaGAGAAGGGGCTCACGGTCC +
Preference number: 4 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRGAVAS*RRGSRS
Trigger: GGACCGTGAGCCCCTTCTCCAAGACGCCACTGCACC...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCAGGTGCCGGCTCTTCTaGCGGCCGACAGTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRRCRLF*RPTVFA
Trigger: AGCGAAGACTGTCGGCCGCCAGAAGAGCCGGCACCT...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCCTTCTTCATGGTCAGTaGCCTGTTAACATTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSLLHGQ*PVNIVQ
Trigger: CTGCACAATGTTAACAGGCCACTGACCATGAAGAAG...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGCTGAAGGGCGGGAGGTaGCCCACAGGTGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLLKGGR*PTGAMC
Trigger: ACACATGGCACCTGTGGGCCACCTCCCGCCCTTCAG...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCGGATGGGCGTCGGAGTaGGCAGGATGTGTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRGWASE*AGCVRS
Trigger: ACTCCGGACACATCCTGCCCACTCCGACGCCCATCC...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTACCATGCTGGACGGGTaGGGGTGGCCGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVTMLDG*GWPKER
Trigger: CCTCTCCTTCGGCCACCCCCACCCGTCCAGCATGGT...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGTTTCCTTCCTGTGACGGGCCGTGGCCACTCTaGCTTTGGCTCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SDLGDVSPFKKMLFPSCDGPWPL*LWLSPA
Trigger: GGCTGGGCTGAGCCAAAGCCAGAGTGGCCACGGCCC...GTCACAGGAAGGAAACAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GTGGTGTCGGCCTTCGGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCAAAATAAGTTACTTCTaGCCGTGGTGCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VVSAFGKCWAAKGLVHPSKISYF*PWCSLQ
Trigger: CTGCAGGGAGCACCACGGCCAGAAGTAACTTATTTT...GGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR TCA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTGGCAATAGACAGACTTaGGCAGCGAGTCCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVGNRQT*AASPGA
Trigger: CGCCCCGGGACTCGCTGCTCAAGTCTGTCTATTGCC...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR GCA 90 bp GGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGATGACTTCTCCTGCATaGACTTTGACAGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: GSAQPGVRLFQRGKPEEKMTSPA*TLTAPR
Trigger: TCGAGGAGCTGTCAAAGTGCATGCAGGAGAAGTCAT...CTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp ACGTTTATATACAGCTGTACCTTGGGAAGGATCCAGACAGCCACAGTAAAGCTGGAGGTGGCCCACAGGTaGCATGTGTCCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TFIYSCTLGRIQTATVKLEVAHR*HVSSQG
Trigger: GCCCTGGCTGGACACATGGCACCTGTGGGCCACCTC...CAGCTTTACTGTGGCTGTCTGGATCCTTCCCAAGGTACAGCTGTATATAAACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR GCA 90 bp AATAAGTTACTTCTGGCCGTGGTGCTCCCTGCAGCGACTGCCCGCCCATATTGCCCTTCTAAAAATGGTTaGCTTCGTCTGTCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: NKLLLAVVLPAATARPYCPSKNG*LRLSRP
Trigger: GGGACGGGACAGACGAAGGCAACCATTTTTAGAAGG...GCAATATGGGCGGGCAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAACTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR GCA 90 bp TGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAACTGCCCGCCCATATTaGACTTGGTCACTACATCAG +
Preference number: 4 (lower is better)
Translates to: WLSPAWSSAISEREARGETARPY*TWSLHQ
Trigger: CTGATGTAGTGACCAAGTGCAATATGGGCGGGCAGT...TTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCGCTGTGCAACAAGTGTaGGCGGCACATCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRAVQQV*AAHLAS
Trigger: GGAGGCCAGATGTGCCGCCCACACTTGTTGCACAGC...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCAGACAGGGTCCCCGTTaGCGTTTCGGCGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRRQGPR*RFGAIR
Trigger: CCTTATGGCGCCGAAACGCCAACGGGGACCCTGTCT...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGGGGCTGCTAAGGGTTTaGTCCACCCATCCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLGLLRV*STHPGS
Trigger: ACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCC...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CGTCACCGCATACAGAATCTAAGCTCGGGACACGTTTATATACAGCTGTACCTTACCCTCCCTGGGCCGTaGCCACTCTGGCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RHRIQNLSSGHVYIQLYLTLPGP*PLWLWL
Trigger: GAGCCAAAGCCAGAGTGGCCACGGCCCAGGGAGGGT...AAGGTACAGCTGTATATAAACGTGTCCCGAGCTTAGATTCTGTATGCGGTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
3UTR CAA 72 bp TATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTaGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: YLQGPPDKTGCG*RSVRGHSHSSF
Trigger: GAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGTTTCCTTCCTGTGACTGGTGTGAGTCGGGGTaGTGCGCATTCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: SDLGDVSPFKKMLFPSCDWCESG*CAFSTA
Trigger: GGCCGTGCTGAATGCGCAGCACCCCGACTCACACCA...GTCACAGGAAGGAAACAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGTTTCCTTCCTGTGACGGCAAACCCGGGCTGTaGAACAAGTGTGGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: SDLGDVSPFKKMLFPSCDGKPGL*NKCGRH
Trigger: GTGCCGCCCACACTTGTTGCACAGCCCGGGTTTGCC...GTCACAGGAAGGAAACAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGACACTTTCCATCTTCATaGTCTCCGTCAGTGACACCT +
Preference number: 4 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGHFPSS*SPSVTP
Trigger: AGGTGTCACTGACGGAGAGCATGAAGATGGAAAGTG...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp GGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTAACATTCACAGTAACTaGTGGCAGGCTGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: GLKAKGAIWETFPLSRKCNIHSN*WQAAGR
Trigger: GCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTT...ACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTGCTGTGCAACAAGTGTaGGCGGCACATCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVAVQQV*AAHLAS
Trigger: GGAGGCCAGATGTGCCGCCCACACTTGTTGCACAGC...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp GGCTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGCTTCTTCATGGTCAGTaGCCTGTTAACATTGTGCAG +
Preference number: 4 (lower is better)
Translates to: GLRSVRGHSHSSFGLKAKLLHGQ*PVNIVQ
Trigger: CTGCACAATGTTAACAGGCCACTGACCATGAAGAAG...CTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CGTCACCGCATACAGAATCTAAGCTCGGGACACGTTTATATACAGCTGTACCTTCAGAGCCCTGGCAAGTaGACCCGCCAATCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: RHRIQNLSSGHVYIQLYLQSPGK*TRQSRG
Trigger: TCCTCGGGATTGGCGGGTCCACTTGCCAGGGCTCTG...AAGGTACAGCTGTATATAAACGTGTCCCGAGCTTAGATTCTGTATGCGGTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGAGTTACTTCTGGCCGTaGTGCTCCCTGCAGCGACTG +
Preference number: 4 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLSYFWP*CSLQRL
Trigger: CAGTCGCTGCAGGGAGCACCACGGCCAGAAGTAACT...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR TCA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTGTGACACCTGGTACTTaGCGCCGTCCTTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVVTPGT*RRPCPL
Trigger: GAGAGGACAAGGACGGCGTCAAGTACCAGGTGTCAC...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGAGGAGGCGAGGGGGTTaGAGGGTTAGCAGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLRRRGG*RVSRKR
Trigger: CCTTTTTCTGCTAACCCTTCAACCCCCTCGCCTCCT...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp AGGACTTGGGACAGCTCAGACCACCAAGTCTCCAAGTCCTTGTTAGAAACAAGACTGGGCGCAGGGGACTaGCACTTTCCATCTTCATGC +
Preference number: 4 (lower is better)
Translates to: RTWDSSDHQVSKSLLETRLGAGD*HFPSSC
Trigger: GCATGAAGATGGAAAGTGGCAGTCCCCTGCGCCCAG...TCTTGTTTCTAACAAGGACTTGGAGACTTGGTGGTCTGAGCTGTCCCAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGTCGGCCTTCGGGAAATaGTGGGCTGCTAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLSAFGK*WAAKGL
Trigger: CAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGA...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTTGCCAGGCCAGCAAATaGCAACCAGCCCCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVCQASK*QPAPRN
Trigger: GTTTCTGGGGGCTGGTTGGCATTTGCTGGCCTGGCA...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR GCA 90 bp CGTCACCGCATACAGAATCTAAGCTCGGGACACGTTTATATACAGCTGTACCTTGCTCCCTGCAGCGACTaGCCGCCCATATTGCACTTG +
Preference number: 4 (lower is better)
Translates to: RHRIQNLSSGHVYIQLYLAPCSD*PPILHL
Trigger: CAAGTGCAATATGGGCGGGCAGTCGCTGCAGGGAGC...AAGGTACAGCTGTATATAAACGTGTCCCGAGCTTAGATTCTGTATGCGGTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTTTTGGGTGGCGTGGGTaGGAAGCCGAAAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVFGWRG*EAEKVG
Trigger: TCCCACCTTTTCGGCTTCCCACCCACGCCACCCAAA...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCTGGTGTGTAGCAGGCTaGGTGCCCATAGTAGCTAGG +
Preference number: 4 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRWCVAG*VPIVAR
Trigger: CCTAGCTACTATGGGCACCCAGCCTGCTACACACCA...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGTGGCTCAGCCCAGCCTaGAGTTCGGCTATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLWLSPA*SSAISE
Trigger: CTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCA...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp CGTCACCGCATACAGAATCTAAGCTCGGGACACGTTTATATACAGCTGTACCTTAATTTGCACAACAGGTaGCGGCTCTTCTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: RHRIQNLSSGHVYIQLYLNLHNR*RLFWRP
Trigger: CGGCCGCCAGAAGAGCCGGCACCTGTTGTGCAAATT...AAGGTACAGCTGTATATAAACGTGTCCCGAGCTTAGATTCTGTATGCGGTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR GCA 90 bp GGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGTCGTCTGACAATTTaGACAACAGGTGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GLKAKGAIWETFPLSRKCCRLTI*TTGAGS
Trigger: AGAGCCGGCACCTGTTGTGCAAATTGTCAGACGACA...ACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp ACGTTTATATACAGCTGTACCTTGGGAAGGATCCAGACAGCCACAGTAAAGCTGCAGGAGACACTTCTTTaGGTGGCGTGGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TFIYSCTLGRIQTATVKLQETLL*VAWVGS
Trigger: GCTTCCCACCCACGCCACCCAAAGAAGTGTCTCCTG...CAGCTTTACTGTGGCTGTCTGGATCCTTCCCAAGGTACAGCTGTATATAAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp AGGACTTGGGACAGCTCAGACCACCAAGTCTCCAAGTCCTTGTTAGAAACAAGAGGCGCCATAAGGTGGTaGTTGTCGTCAGTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: RTWDSSDHQVSKSLLETRGAIRW*LSSVFA
Trigger: AGCGAAGACTGACGACAACCACCACCTTATGGCGCC...TCTTGTTTCTAACAAGGACTTGGAGACTTGGTGGTCTGAGCTGTCCCAAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430265.6
CDS-3UTR TCA 90 bp ACGTTTATATACAGCTGTACCTTGGGAAGGATCCAGACAGCCACAGTAAAGCTGCTCCTGCATGCACTTTaGCAGCTCCTCGAAGCACTC +
Preference number: 4 (lower is better)
Translates to: TFIYSCTLGRIQTATVKLLLHAL*QLLEAL
Trigger: GAGTGCTTCGAGGAGCTGTCAAAGTGCATGCAGGAG...CAGCTTTACTGTGGCTGTCTGGATCCTTCCCAAGGTACAGCTGTATATAAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR GCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCACTCCGCCCCTTTCTTaGTCTTCTTGGACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRTPPLS*SSWTCW
Trigger: CCAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGT...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR GCA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTGGGGATGACTTCTCCTaGATGCACTTTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVGDDFS*MHFDSS
Trigger: GGAGCTGTCAAAGTGCATGCAGGAGAAGTCATCCCC...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp CGTCACCGCATACAGAATCTAAGCTCGGGACACGTTTATATACAGCTGTACCTTTGGCTCAGCCCAGCCTaGAGTTCGGCTATTTCAGAG +
Preference number: 4 (lower is better)
Translates to: RHRIQNLSSGHVYIQLYLWLSPA*SSAISE
Trigger: CTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCA...AAGGTACAGCTGTATATAAACGTGTCCCGAGCTTAGATTCTGTATGCGGTGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCTCTTCTTGGACTTGTTaGACATCTTCCGGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRSSWTC*TSSGSE
Trigger: CTCGGAACCGGAAGATGTCCAACAAGTCCAAGAAGA...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CCA 90 bp AGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGTTTCCTTCCTGTGACAAGAACCGGAGGACTTaGGACAGCTCAGACCACCAA +
Preference number: 4 (lower is better)
Translates to: SDLGDVSPFKKMLFPSCDKNRRT*DSSDHQ
Trigger: TTGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTT...GTCACAGGAAGGAAACAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR TCA 90 bp AGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGTTTCCTTCCTGTGACGTGGTGGTTGTCGTCTaGCAATTTGCACAACAGGTG +
Preference number: 4 (lower is better)
Translates to: SDLGDVSPFKKMLFPSCDVVVVV*QFAQQV
Trigger: CACCTGTTGTGCAAATTGTCAGACGACAACCACCAC...GTCACAGGAAGGAAACAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp AGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGTTTCCTTCCTGTGACTTCATACTAGGGCTGTaGGATCCCAGCTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SDLGDVSPFKKMLFPSCDFILGL*DPSSFP
Trigger: TGGAAAAGAGCTGGGATCCCACAGCCCTAGTATGAA...GTCACAGGAAGGAAACAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CCA 90 bp ACGTTTATATACAGCTGTACCTTGGGAAGGATCCAGACAGCCACAGTAAAGCTGCGCCCATATTGCACTTaGTCACTACATCAGCACAAT +
Preference number: 4 (lower is better)
Translates to: TFIYSCTLGRIQTATVKLRPYCT*SLHQHN
Trigger: ATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCG...CAGCTTTACTGTGGCTGTCTGGATCCTTCCCAAGGTACAGCTGTATATAAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS CCA 90 bp GCGGCGCTCACCAGCAGAGCCTGGGCGGCACGCCGAGCGGCCGCATaGTGTTCAGCGGACCGCTTTTGTCCGCCTGGTGGGCGACGGGGC +
Preference number: 5 (lower is better)
Translates to: AALTSRAWAARRAAA*CSADRFCPPGGRRG
Trigger: GCCCCGTCGCCCACCAGGCGGACAAAAGCGGTCCGCTGAACACCATGCGGCCGCTCGGCGTGCCGCCCAGGCTCTGCTGGTGAGCGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000498200.1
CDS CCA 90 bp TTTGCCCCCGTCCAGCCAGGGCAAACCCGGGCTGTGCAACAAGTGTaGGCGGCACATCTGGCCTCCGGTCAGGCGGGCGTGCGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: FAPVQPGQTRAVQQV*AAHLASGQAGVRGA
Trigger: AGCCCCGCGCACGCCCGCCTGACCGGAGGCCAGATGTGCCGCCCACACTTGTTGCACAGCCCGGGTTTGCCCTGGCTGGACGGGGGCAAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS GCA 90 bp GAGAGGGCTGCTTTGCCCCCGTCCAGCCAGGGCAAACCCGGGCTGTaGAACAAGTGTGGGCGGCACATCTGGCCTCCGGTCAGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: ERAALPPSSQGKPGL*NKCGRHIWPPVRRA
Trigger: CGCCCGCCTGACCGGAGGCCAGATGTGCCGCCCACACTTGTTGCACAGCCCGGGTTTGCCCTGGCTGGACGGGGGCAAAGCAGCCCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS GCA 90 bp CACGGTCCAGGGGTTGTGGTGGTGGGCCGCAGCGGCAGAGAGGGCTaGTTTGCCCCCGTCCAGCCAGGGCAAACCCGGGCTGTGCAACAA +
Preference number: 5 (lower is better)
Translates to: HGPGVVVVGRSGREG*FAPVQPGQTRAVQQ
Trigger: TTGTTGCACAGCCCGGGTTTGCCCTGGCTGGACGGGGGCAAAGCAGCCCTCTCTGCCGCTGCGGCCCACCACCACAACCCCTGGACCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS CCA 90 bp GCTGCCGACTCCCAGACCGTTCCCTCCCCTAGCTCGGGCGCTGTCTaGGTGGACTGGGGGTTGGGATGGTTCGGACGACAGCGGCGGAAC +
Preference number: 5 (lower is better)
Translates to: AADSQTVPSPSSGAV*VDWGLGWFGRQRRN
Trigger: GTTCCGCCGCTGTCGTCCGAACCATCCCAACCCCCAGTCCACCCAGACAGCGCCCGAGCTAGGGGAGGGAACGGTCTGGGAGTCGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487848.5
CDS GCA 90 bp TCCAGGGGTTGTGGTGGTGGGCCGCAGCGGCAGAGAGGGCTGCTTTaGCCCCGTCCAGCCAGGGCAAACCCGGGCTGTGCAACAAGTGTG +
Preference number: 5 (lower is better)
Translates to: SRGCGGGPQRQRGLL*PRPARANPGCATSV
Trigger: CACACTTGTTGCACAGCCCGGGTTTGCCCTGGCTGGACGGGGGCAAAGCAGCCCTCTCTGCCGCTGCGGCCCACCACCACAACCCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS CCA 90 bp CCGACTCCCAGACCGTTCCCTCCCCTAGCTCGGGCGCTGTCTGGGTaGACTGGGGGTTGGGATGGTTCGGACGACAGCGGCGGAACAGCA +
Preference number: 5 (lower is better)
Translates to: PTPRPFPPLARALSG*TGGWDGSDDSGGTA
Trigger: TGCTGTTCCGCCGCTGTCGTCCGAACCATCCCAACCCCCAGTCCACCCAGACAGCGCCCGAGCTAGGGGAGGGAACGGTCTGGGAGTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487848.5
CDS-3UTR CAA 90 bp CCTGTGACCCAGCCCTGGCCTGGGAATCTGTGCAGGACCGCCCGTGATTGTCTCCTCACGGTCCAGGGGTaGTGGTGGTGGGCCGCAGCG +
Preference number: 5 (lower is better)
Translates to: PVTQPWPGNLCRTARDCLLTVQG*WWWAAA
Trigger: CGCTGCGGCCCACCACCACAACCCCTGGACCGTGAG...GAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS TCA 90 bp CGGGGCCCTGCTAGGATGGATGTGGCGGCAGGCAATAGACAGACTTaGGCAGCGAGTCCCGGGGCGACGCTGGCCTCGCTACCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: RGPARMDVAAGNRQT*AASPGATLASLPSW
Trigger: CCAGGAAGGTAGCGAGGCCAGCGTCGCCCCGGGACTCGCTGCTCAAGTCTGTCTATTGCCTGCCGCCACATCCATCCTAGCAGGGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CAA 90 bp TGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCCTCACGGTCCAGGGGTaGTGGTGGTGGGCCGCAGCG +
Preference number: 5 (lower is better)
Translates to: WTRQSRGRTGGLGTAQTTLTVQG*WWWAAA
Trigger: CGCTGCGGCCCACCACCACAACCCCTGGACCGTGAG...GGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS TCA 90 bp AGGCCTTGGGGTTGCCTTCCTCGACAACGCAGGCAGGAGCCGGCTTaGCCGAAGCCTCCACCTCGGTTGCAGGTCCTGCGTAGGATGCGG +
Preference number: 5 (lower is better)
Translates to: RPWGCLPRQRRQEPA*PKPPPRLQVLRRMR
Trigger: CCGCATCCTACGCAGGACCTGCAACCGAGGTGGAGGCTTCGGTCAAGCCGGCTCCTGCCTGCGTTGTCGAGGAAGGCAACCCCAAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS CCA 90 bp CGGACCGCTTTTGTCCGCCTGGTGGGCGACGGGGCCCTGCTAGGATaGATGTGGCGGCAGGCAATAGACAGACTTGAGCAGCGAGTCCCG +
Preference number: 5 (lower is better)
Translates to: RTAFVRLVGDGALLG*MWRQAIDRLEQRVP
Trigger: CGGGACTCGCTGCTCAAGTCTGTCTATTGCCTGCCGCCACATCCATCCTAGCAGGGCCCCGTCGCCCACCAGGCGGACAAAAGCGGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000498200.1
CDS GCA 90 bp GGCAGGAGCCGGCTTGACCGAAGCCTCCACCTCGGTTGCAGGTCCTaGGTAGGATGCGGGACTGCTGCATTCTCTGGCGGAAACGAACCC +
Preference number: 5 (lower is better)
Translates to: GRSRLDRSLHLGCRS*VGCGTAAFSGGNEP
Trigger: GGGTTCGTTTCCGCCAGAGAATGCAGCAGTCCCGCATCCTACGCAGGACCTGCAACCGAGGTGGAGGCTTCGGTCAAGCCGGCTCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS GCA 90 bp GACAACGCAGGCAGGAGCCGGCTTGACCGAAGCCTCCACCTCGGTTaGAGGTCCTGCGTAGGATGCGGGACTGCTGCATTCTCTGGCGGA +
Preference number: 5 (lower is better)
Translates to: DNAGRSRLDRSLHLG*RSCVGCGTAAFSGG
Trigger: TCCGCCAGAGAATGCAGCAGTCCCGCATCCTACGCAGGACCTGCAACCGAGGTGGAGGCTTCGGTCAAGCCGGCTCCTGCCTGCGTTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS CCA 90 bp AGACGCAGCCCCCGTGGTGCTAGGGTCAGGAGACACTTCTTTGGGTaGCGTGGGTGGGAAGCCGAAAAGGTGGGAGCCAGAGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RRSPRGARVRRHFFG*RGWEAEKVGARVGC
Trigger: GCAGCCCACTCTGGCTCCCACCTTTTCGGCTTCCCACCCACGCCACCCAAAGAAGTGTCTCCTGACCCTAGCACCACGGGGGCTGCGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
CDS-3UTR CAA 90 bp CCTGTGACCCAGCCCTGGCCTGGGAATCTGTGCAGGACCGCCCGTGATTGTCTCGCTGTGGCCCCACAGTaGACACACTCCCGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: PVTQPWPGNLCRTARDCLAVAPQ*THSRPS
Trigger: AGAAGGCCGGGAGTGTGTCAACTGTGGGGCCACAGC...GAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp CCTGTGACCCAGCCCTGGCCTGGGAATCTGTGCAGGACCGCCCGTGATTGTCTCTGGGCTGCTAAGGGTTaGGTCCACCCATCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: PVTQPWPGNLCRTARDCLWAAKG*VHPSRE
Trigger: CTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCA...GAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS GCA 90 bp GGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTaGCCGGTCCTCGACGTCCATCTGTTCCCTAGCCCATGGCGGTCA +
Preference number: 5 (lower is better)
Translates to: GKCWAAKGLVHPSRE*PVLDVHLFPSPWRS
Trigger: TGACCGCCATGGGCTAGGGAACAGATGGACGTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000489987.1
CDS CCA 90 bp GTAGGATGCGGGACTGCTGCATTCTCTGGCGGAAACGAACCCGCCTaGGAGAGAGAAATGCGACGCCAAGTAGCAGGGCGCCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: VGCGTAAFSGGNEPA*EREMRRQVAGRPAG
Trigger: GCCAGCTGGGCGCCCTGCTACTTGGCGTCGCATTTCTCTCTCCCAGGCGGGTTCGTTTCCGCCAGAGAATGCAGCAGTCCCGCATCCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS-3UTR CAA 90 bp TCGGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTGCCCGGTACTTGACGCCGTCCTaGTCCTCTCCTCGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: SGNAGLLRVWSTHPGSARYLTPS*SSPRAA
Trigger: TGCAGCCCGAGGAGAGGACAAGGACGGCGTCAAGTA...CCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS TCA 90 bp GAGCGGGGTTGGCATAGTAGGGGTTGCCCTGCGAGTCGAGGTGATTaGAGAAGACGTCCACCTCGTCTGGAGGCAGCAGCTGCGCGGGTT +
Preference number: 5 (lower is better)
Translates to: ERGWHSRGCPASRGD*RRRPPRLEAAAARV
Trigger: AACCCGCGCAGCTGCTGCCTCCAGACGAGGTGGACGTCTTCTTCAATCACCTCGACTCGCAGGGCAACCCCTACTATGCCAACCCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS CCA 90 bp GTTGCCCTGCGAGTCGAGGTGATTGAAGAAGACGTCCACCTCGTCTaGAGGCAGCAGCTGCGCGGGTTCCATGTAGTTGTGCGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: VALRVEVIEEDVHLV*RQQLRGFHVVVRQA
Trigger: GGCCTGGCGCACAACTACATGGAACCCGCGCAGCTGCTGCCTCCAGACGAGGTGGACGTCTTCTTCAATCACCTCGACTCGCAGGGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS CCA 90 bp TGGTGGTTGTCGTCTGACAATTTGCACAACAGGTGCCGGCTCTTCTaGCGGCCGACTGGGAGGGCAAGGCAGCGTCAGCAGGCTGGACTC +
Preference number: 5 (lower is better)
Translates to: WWLSSDNLHNRCRLF*RPTGRARQRQQAGL
Trigger: GAGTCCAGCCTGCTGACGCTGCCTTGCCCTCCCAGTCGGCCGCCAGAAGAGCCGGCACCTGTTGTGCAAATTGTCAGACGACAACCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489987.1
CDS GCA 90 bp AAGCCTCCACCTCGGTTGCAGGTCCTGCGTAGGATGCGGGACTGCTaGATTCTCTGGCGGAAACGAACCCGCCTGGGAGAGAGAAATGCG +
Preference number: 5 (lower is better)
Translates to: KPPPRLQVLRRMRDC*ILWRKRTRLGERNA
Trigger: CGCATTTCTCTCTCCCAGGCGGGTTCGTTTCCGCCAGAGAATGCAGCAGTCCCGCATCCTACGCAGGACCTGCAACCGAGGTGGAGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS GCA 90 bp CCGAAGCCTCCACCTCGGTTGCAGGTCCTGCGTAGGATGCGGGACTaGTGCATTCTCTGGCGGAAACGAACCCGCCTGGGAGAGAGAAAT +
Preference number: 5 (lower is better)
Translates to: PKPPPRLQVLRRMRD*CILWRKRTRLGERN
Trigger: ATTTCTCTCTCCCAGGCGGGTTCGTTTCCGCCAGAGAATGCAGCAGTCCCGCATCCTACGCAGGACCTGCAACCGAGGTGGAGGCTTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS CCA 90 bp CCTCGGTTGCAGGTCCTGCGTAGGATGCGGGACTGCTGCATTCTCTaGCGGAAACGAACCCGCCTGGGAGAGAGAAATGCGACGCCAAGT +
Preference number: 5 (lower is better)
Translates to: PRLQVLRRMRDCCIL*RKRTRLGERNATPS
Trigger: ACTTGGCGTCGCATTTCTCTCTCCCAGGCGGGTTCGTTTCCGCCAGAGAATGCAGCAGTCCCGCATCCTACGCAGGACCTGCAACCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS-3UTR CAA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGATTCAGCGGACCGCTTTaGTCCGCCTGGTGGGCGACG +
Preference number: 5 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGFSGPL*SAWWAT
Trigger: CGTCGCCCACCAGGCGGACAAAAGCGGTCCGCTGAA...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CAA 90 bp GCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGAGGGTGCAGTGGCGTCTaGGAGAAGGGGCTCACGGTC +
Preference number: 5 (lower is better)
Translates to: AQPSLEFGYFREGSQRRRGCSGV*EKGLTV
Trigger: GACCGTGAGCCCCTTCTCCAAGACGCCACTGCACCC...TCTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp TGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCTCAGGAGACACTTCTTaGGGTGGCGTGGGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: WTRQSRGRTGGLGTAQTTSGDTS*GGVGGK
Trigger: CTTCCCACCCACGCCACCCAAAGAAGTGTCTCCTGA...GGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp GTGGTGTCGGCCTTCGGGAAATGCTGGGCTGCTAAGGGTTTGGTCCACCCATCCTACTTGACGCCGTCCTaGTCCTCTCCTCGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: VVSAFGKCWAAKGLVHPSYLTPS*SSPRAA
Trigger: TGCAGCCCGAGGAGAGGACAAGGACGGCGTCAAGTA...GGATGGGTGGACCAAACCCTTAGCAGCCCAGCATTTCCCGAAGGCCGACACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp GCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCCCTCCAGGAAGTGACACCTGGTACTaGACGCCGTCCTTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: AVGNIHSNCWQAAGRPPGSDTWY*TPSLSS
Trigger: AGAGGACAAGGACGGCGTCAAGTACCAGGTGTCACT...TCCTGGAGGGCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp CGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCAAGTCTTGGGCTGCTAAGGGTTaGGTCCACCCATCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: RQSRGRTGGLGTAQTTKSWAAKG*VHPSRE
Trigger: CTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCA...AGACTTGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp TGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCGAAGAACCGGAGGACTaGGGACAGCTCAGACCACCA +
Preference number: 5 (lower is better)
Translates to: WTRQSRGRTGGLGTAQTTEEPED*GQLRPP
Trigger: TGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTC...GGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp TGGACCCGCCAATCCCGAGGAAGAACCGGAGGACTTGGGACAGCTCAGACCACCAAGACAGGCTGTGGCTaGCGCTCAGTAAGGGGACAC +
Preference number: 5 (lower is better)
Translates to: WTRQSRGRTGGLGTAQTTKTGCG*RSVRGH
Trigger: GTGTCCCCTTACTGAGCGCAAGCCACAGCCTGTCTT...GGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTCCTCGGGATTGGCGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp CTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGGAACAGGAACGAGCCTaGCTGCGCTGCTTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: LALSKGTQSQQLRPQSQGEQERA*LRCLGV
Trigger: CACCCCTAAGCAGCGCAGCAAGGCTCGTTCCTGTTC...CCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp CACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTGCTGTGGCCCCACAGTaGACACACTCCCGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: HSHSSFGLKAKGAIWETFAVAPQ*THSRPS
Trigger: AGAAGGCCGGGAGTGTGTCAACTGTGGGGCCACAGC...AAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp CCTGTGACCCAGCCCTGGCCTGGGAATCTGTGCAGGACCGCCCGTGATTGTCTCTCTCCTGCATGCACTTaGACAGCTCCTCGAAGCACT +
Preference number: 5 (lower is better)
Translates to: PVTQPWPGNLCRTARDCLSPACT*TAPRST
Trigger: AGTGCTTCGAGGAGCTGTCAAAGTGCATGCAGGAGA...GAGACAATCACGGGCGGTCCTGCACAGATTCCCAGGCCAGGGCTGGGTCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS GCA 90 bp TCTCGAATCCTGCCTGCTCATAAACGAATCCTAGCACGGGGTGCCTaGGTAGACCTGGAGCTCACCACCAGATGTTCCCGACCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: SRILPAHKRILARGA*VDLELTTRCSRPRE
Trigger: CTCCCGAGGTCGGGAACATCTGGTGGTGAGCTCCAGGTCTACGCAGGCACCCCGTGCTAGGATTCGTTTATGAGCAGGCAGGATTCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498200.1
CDS CCA 90 bp AGGGGACTGCCACTTTCCATCTTCATGCTCTCCGTCAGTGACACCTaGTACTTGACGCCGTCCTTGTCCTCTCCTCGGGCTGCACTACCC +
Preference number: 5 (lower is better)
Translates to: RGLPLSIFMLSVSDT*YLTPSLSSPRAALP
Trigger: GGGTAGTGCAGCCCGAGGAGAGGACAAGGACGGCGTCAAGTACCAGGTGTCACTGACGGAGAGCATGAAGATGGAAAGTGGCAGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
CDS-3UTR CAA 90 bp AGCCTCTCAGCGGTGGGGAACATTCACAGTAACTGCTGGCAGGCTGCTGGGCGCGACTGCCCGCCCATATaGCACTTGGTCACTACATCA +
Preference number: 5 (lower is better)
Translates to: SLSAVGNIHSNCWQAAGRDCPPI*HLVTTS
Trigger: TGATGTAGTGACCAAGTGCAATATGGGCGGGCAGTC...GCGCCCAGCAGCCTGCCAGCAGTTACTGTGAATGTTCCCCACCGCTGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS GCA 90 bp ATGTGTCCAGCCAGGGCAGCTGCACTGAAGGGGGATGACTTCTCCTaGATGCACTTTGACAGCTCCTCGAAGCACTCCGCCCCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: MCPARAAALKGDDFS*MHFDSSSKHSAPFL
Trigger: CAAGAAAGGGGCGGAGTGCTTCGAGGAGCTGTCAAAGTGCATGCAGGAGAAGTCATCCCCCTTCAGTGCAGCTGCCCTGGCTGGACACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000489987.1
CDS-3UTR CAA 90 bp AGGACTTGGGACAGCTCAGACCACCAAGTCTCCAAGTCCTTGTTAGAAACAAGAGCAGAGAGGGCTGCTTaGCCCCCGTCCAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RTWDSSDHQVSKSLLETRAERAA*PPSSQG
Trigger: GCCCTGGCTGGACGGGGGCAAAGCAGCCCTCTCTGC...TCTTGTTTCTAACAAGGACTTGGAGACTTGGTGGTCTGAGCTGTCCCAAGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp TGGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGAAGAACCGGAGGACTaGGGACAGCTCAGACCACCA +
Preference number: 5 (lower is better)
Translates to: WLSPAWSSAISEREARGEEEPED*GQLRPP
Trigger: TGGTGGTCTGAGCTGTCCCAAGTCCTCCGGTTCTTC...TTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp AGCCAGAGGAGAAGAGGGTGCAGGCTGAGGTCCCCACAAATCTGCCCCCAGAGCCCGCCCATATTGCACTaGGTCACTACATCAGCACAA +
Preference number: 5 (lower is better)
Translates to: SQRRRGCRLRSPQICPQSPPILH*VTTSAQ
Trigger: TTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGG...GCTCTGGGGGCAGATTTGTGGGGACCTCAGCCTGCACCCTCTTCTCCTCTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CAA 90 bp CGTCACCGCATACAGAATCTAAGCTCGGGACACGTTTATATACAGCTGTACCTTGCAGAGAGGGCTGCTTaGCCCCCGTCCAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RHRIQNLSSGHVYIQLYLAERAA*PPSSQG
Trigger: GCCCTGGCTGGACGGGGGCAAAGCAGCCCTCTCTGC...AAGGTACAGCTGTATATAAACGTGTCCCGAGCTTAGATTCTGTATGCGGTGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CAA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCGGGTGCAGTGGCGTCTaGGAGAAGGGGCTCACGGTC +
Preference number: 5 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRGCSGV*EKGLTV
Trigger: GACCGTGAGCCCCTTCTCCAAGACGCCACTGCACCC...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp GGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGTTGTCGTCTGACAATTaGCACAACAGGTGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: GSAQPGVRLFQRGKPEEKLSSDN*HNRCRL
Trigger: GAGCCGGCACCTGTTGTGCAAATTGTCAGACGACAA...CTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CAA 90 bp GGCTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGTCTCCTGCATGCACTTaGACAGCTCCTCGAAGCACT +
Preference number: 5 (lower is better)
Translates to: GLRSVRGHSHSSFGLKAKSPACT*TAPRST
Trigger: AGTGCTTCGAGGAGCTGTCAAAGTGCATGCAGGAGA...CTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp TTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCCATAAGGTGGTGGTaGTCGTCAGTCTTCGCTTGG +
Preference number: 5 (lower is better)
Translates to: LRSVRGHSHSSFGLKAKGAIRWW*SSVFAW
Trigger: CCAAGCGAAGACTGACGACAACCACCACCTTATGGC...TCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430265.6
CDS-3UTR CAA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCCAGACAGGGTCCCCGTaGGCGTTTCGGCGCCATAAG +
Preference number: 5 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRQTGSP*AFRRHK
Trigger: CTTATGGCGCCGAAACGCCAACGGGGACCCTGTCTG...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS GCA 90 bp CCTGCATGCACTTTGACAGCTCCTCGAAGCACTCCGCCCCTTTCTTaGTCTTCTTGGACTTGTTGGACATCTTCCGGTTCCGAGTCTGGA +
Preference number: 5 (lower is better)
Translates to: PACTLTAPRSTPPLS*SSWTCWTSSGSESG
Trigger: TCCAGACTCGGAACCGGAAGATGTCCAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGTGCTTCGAGGAGCTGTCAAAGTGCATGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000489987.1
CDS-3UTR CAA 90 bp GGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTCAGGAGACACTTCTTaGGGTGGCGTGGGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: GLKAKGAIWETFPLSRKCSGDTS*GGVGGK
Trigger: CTTCCCACCCACGCCACCCAAAGAAGTGTCTCCTGA...ACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGGAACAGGAACGAGCCTaGCTGCGCTGCTTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLEQERA*LRCLGV
Trigger: CACCCCTAAGCAGCGCAGCAAGGCTCGTTCCTGTTC...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp CCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGGCCGACAGTCTTCGCTaGGGCTTGATGAGTGGTCGG +
Preference number: 5 (lower is better)
Translates to: PQSQGSDLGDVSPFKKMLADSLR*GLMSGR
Trigger: CCGACCACTCATCAAGCCCAAGCGAAGACTGTCGGC...CAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CAA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTCAGACAGGGTCCCCGTaGGCGTTTCGGCGCCATAAG +
Preference number: 5 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVQTGSP*AFRRHK
Trigger: CTTATGGCGCCGAAACGCCAACGGGGACCCTGTCTG...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp CACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTATATACAGCTGTACCTaGGGAAGGATCCAGACAGCC +
Preference number: 5 (lower is better)
Translates to: HSHSSFGLKAKGAIWETFIYSCT*GRIQTA
Trigger: GGCTGTCTGGATCCTTCCCAAGGTACAGCTGTATAT...AAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CAA 90 bp GGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTGTCGTCAGTCTTCGCTaGGGCTTGATGAGTGGTCGG +
Preference number: 5 (lower is better)
Translates to: GLKAKGAIWETFPLSRKCVVSLR*GLMSGR
Trigger: CCGACCACTCATCAAGCCCAAGCGAAGACTGACGAC...ACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430265.6
CDS CCA 90 bp ACTTTGACAGCTCCTCGAAGCACTCCGCCCCTTTCTTGCTCTTCTTaGACTTGTTGGACATCTTCCGGTTCCGAGTCTGGATCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: TLTAPRSTPPLSCSS*TCWTSSGSESGSLP
Trigger: AGGAAGGGATCCAGACTCGGAACCGGAAGATGTCCAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGTGCTTCGAGGAGCTGTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000489987.1
CDS-3UTR CAA 90 bp GGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTAGTGACACCTGGTACTaGACGCCGTCCTTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: GLKAKGAIWETFPLSRKCSDTWY*TPSLSS
Trigger: AGAGGACAAGGACGGCGTCAAGTACCAGGTGTCACT...ACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp CCCGCCCATATTGCACTTGGTCACTACATCAGCACAATCCTCCTCCTGGGCCAGTTGCTCTTCTTGGACTaGTTGGACATCTTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: PAHIALGHYISTILLLGQLLFLD*LDIFRF
Trigger: GAACCGGAAGATGTCCAACAAGTCCAAGAAGAGCAA...CTGGCCCAGGAGGAGGATTGTGCTGATGTAGTGACCAAGTGCAATATGGGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CAA 90 bp GGCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGCCTTTCTTGCTCTTCTaGGACTTGTTGGACATCTTC +
Preference number: 5 (lower is better)
Translates to: GSAQPGVRLFQRGKPEEKPFLLF*DLLDIF
Trigger: GAAGATGTCCAACAAGTCCAAGAAGAGCAAGAAAGG...CTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp GGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTCACTCCGCCCCTTTCTaGCTCTTCTTGGACTTGTTG +
Preference number: 5 (lower is better)
Translates to: GLKAKGAIWETFPLSRKCHSAPF*LFLDLL
Trigger: CAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGTG...ACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTAAGACAGGCTGTGGCTaGCGCTCAGTAAGGGGACAC +
Preference number: 5 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVKTGCG*RSVRGH
Trigger: GTGTCCCCTTACTGAGCGCAAGCCACAGCCTGTCTT...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp AGAAAAAGGATGTATTTACAGGGTCCACCTGACAAGACAGGCTGTGGCTTGCGCCACTCCGCCCCTTTCTaGCTCTTCTTGGACTTGTTG +
Preference number: 5 (lower is better)
Translates to: RKRMYLQGPPDKTGCGLRHSAPF*LFLDLL
Trigger: CAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGTG...GCGCAAGCCACAGCCTGTCTTGTCAGGTGGACCCTGTAAATACATCCTTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp GGCTTGCGCTCAGTAAGGGGACACAGTCACAGCAGCTTCGGCCTCAAAGCCAAGATAAAGTTGTCCTTGTaGTTCTCCAAACAACTGTCC +
Preference number: 5 (lower is better)
Translates to: GLRSVRGHSHSSFGLKAKIKLSL*FSKQLS
Trigger: GGACAGTTGTTTGGAGAACAACAAGGACAACTTTAT...CTTGGCTTTGAGGCCGAAGCTGCTGTGACTGTGTCCCCTTACTGAGCGCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp GCTCAGCCCAGCCTGGAGTTCGGCTATTTCAGAGAGGGAAGCCAGAGGAGAAGACTTTTCCAAAAAGAATaGCAAAGCTCCAACCTTGTG +
Preference number: 5 (lower is better)
Translates to: AQPSLEFGYFREGSQRRRLFQKE*QSSNLV
Trigger: CACAAGGTTGGAGCTTTGCAATTCTTTTTGGAAAAG...TCTTCTCCTCTGGCTTCCCTCTCTGAAATAGCCGAACTCCAGGCTGGGCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS-3UTR CAA 90 bp GGCCTCAAAGCCAAGGGAGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTCCTTTCTTGCTCTTCTaGGACTTGTTGGACATCTTC +
Preference number: 5 (lower is better)
Translates to: GLKAKGAIWETFPLSRKCPFLLF*DLLDIF
Trigger: GAAGATGTCCAACAAGTCCAAGAAGAGCAAGAAAGG...ACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCTCCCTTGGCTTTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp GCCTTCGTCTGTCCCGTCCCCTCCTTTTCTCTACATAAAGTTGTCCTTGTTGTTTTGCTCTTCTTGGACTaGTTGGACATCTTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: AFVCPVPSFSLHKVVLVVLLFLD*LDIFRF
Trigger: GAACCGGAAGATGTCCAACAAGTCCAAGAAGAGCAA...AACAACAAGGACAACTTTATGTAGAGAAAAGGAGGGGACGGGACAGACGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS-3UTR CAA 90 bp AGCGATCTGGGAGACGTTTCCCCTTTCAAGAAAATGTTGTTTCCTTCCTGTGACATAAAGTTGTCCTTGTaGTTCTCCAAACAACTGTCC +
Preference number: 5 (lower is better)
Translates to: SDLGDVSPFKKMLFPSCDIKLSL*FSKQLS
Trigger: GGACAGTTGTTTGGAGAACAACAAGGACAACTTTAT...GTCACAGGAAGGAAACAACATTTTCTTGAAAGGGGAAACGTCTCCCAGATCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000430265.6
CDS CCA 72 bp TCCCGGCTCCGGCCCCTCGGCATCCTCCGGCCGCCCTaGCGCCAGCTGCCGACTCCCAGACCGTTCCCTCCC +
Preference number: 6 (lower is better)
Translates to: SRLRPLGILRPP*RQLPTPRPFPP
Trigger: GGGAGGGAACGGTCTGGGAGTCGGCAGCTGGCGCCAGGGCGGCCGGAGGATGCCGAGGGGCCGGAGCCGGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487848.5
CDS GCA 72 bp GGGGTTGTGGTGGTGGGCCGCAGCGGCAGAGAGGGCTaGTTTGCCCCCGTCCAGCCAGGGCAAACCCGGGCT +
Preference number: 6 (lower is better)
Translates to: GVVVVGRSGREG*FAPVQPGQTRA
Trigger: AGCCCGGGTTTGCCCTGGCTGGACGGGGGCAAAGCAGCCCTCTCTGCCGCTGCGGCCCACCACCACAACCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS GCA 72 bp TGTGGTGGTGGGCCGCAGCGGCAGAGAGGGCTGCTTTaGCCCCGTCCAGCCAGGGCAAACCCGGGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: CGGGPQRQRGLL*PRPARANPGCA
Trigger: TGCACAGCCCGGGTTTGCCCTGGCTGGACGGGGGCAAAGCAGCCCTCTCTGCCGCTGCGGCCCACCACCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS CAA 72 bp TTGTGGTGGTGGGCCGCAGCGGCAGAGAGGGCTGCTTaGCCCCCGTCCAGCCAGGGCAAACCCGGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: LWWWAAAAERAA*PPSSQGKPGLC
Trigger: GCACAGCCCGGGTTTGCCCTGGCTGGACGGGGGCAAAGCAGCCCTCTCTGCCGCTGCGGCCCACCACCACAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS CCA 72 bp GTCCAGCCAGGGCAAACCCGGGCTGTGCAACAAGTGTaGGCGGCACATCTGGCCTCCGGTCAGGCGGGCGTG +
Preference number: 6 (lower is better)
Translates to: VQPGQTRAVQQV*AAHLASGQAGV
Trigger: CACGCCCGCCTGACCGGAGGCCAGATGTGCCGCCCACACTTGTTGCACAGCCCGGGTTTGCCCTGGCTGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS CAA 90 bp GTCCAGGGGTTGTGGTGGTGGGCCGCAGCGGCAGAGAGGGCTGCTTaGCCCCCGTCCAGCCAGGGCAAACCCGGGCTGTGCAACAAGTGT +
Preference number: 6 (lower is better)
Translates to: VQGLWWWAAAAERAA*PPSSQGKPGLCNKC
Trigger: ACACTTGTTGCACAGCCCGGGTTTGCCCTGGCTGGACGGGGGCAAAGCAGCCCTCTCTGCCGCTGCGGCCCACCACCACAACCCCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS GCA 72 bp GCTTTGCCCCCGTCCAGCCAGGGCAAACCCGGGCTGTaGAACAAGTGTGGGCGGCACATCTGGCCTCCGGTC +
Preference number: 6 (lower is better)
Translates to: ALPPSSQGKPGL*NKCGRHIWPPV
Trigger: GACCGGAGGCCAGATGTGCCGCCCACACTTGTTGCACAGCCCGGGTTTGCCCTGGCTGGACGGGGGCAAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS CCA 72 bp GGCTGTAGGAGACGCGCGCCCGCGCGTGAGCGGGGTTaGCATAGTAGGGGTTGCCCTGCGAGTCGAGGTGAT +
Preference number: 6 (lower is better)
Translates to: GCRRRAPARERG*HSRGCPASRGD
Trigger: ATCACCTCGACTCGCAGGGCAACCCCTACTATGCCAACCCCGCTCACGCGCGGGCGCGCGTCTCCTACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS CCA 72 bp AGACCGTTCCCTCCCCTAGCTCGGGCGCTGTCTGGGTaGACTGGGGGTTGGGATGGTTCGGACGACAGCGGC +
Preference number: 6 (lower is better)
Translates to: RPFPPLARALSG*TGGWDGSDDSG
Trigger: GCCGCTGTCGTCCGAACCATCCCAACCCCCAGTCCACCCAGACAGCGCCCGAGCTAGGGGAGGGAACGGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487848.5
CDS GCA 72 bp CGCCGCACAGAGGGGCTTAGCAGGACGGTTAAGGAGTaGTTGAGCAGGGGCCTCGGGAGACCCGAACCAGCC +
Preference number: 6 (lower is better)
Translates to: RRTEGLSRTVKE*LSRGLGRPEPA
Trigger: GGCTGGTTCGGGTCTCCCGAGGCCCCTGCTCAAGCACTCCTTAACCGTCCTGCTAAGCCCCTCTGTGCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS CCA 72 bp TTTGCACAACAGGTGCCGGCTCTTCTGGCGGCCGACTaGGAGGGCAAGGCAGCGTCAGCAGGCTGGACTCCC +
Preference number: 6 (lower is better)
Translates to: FAQQVPALLAAD*EGKAASAGWTP
Trigger: GGGAGTCCAGCCTGCTGACGCTGCCTTGCCCTCCCAGTCGGCCGCCAGAAGAGCCGGCACCTGTTGTGCAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489987.1
CDS CCA 72 bp TCCCAGACCGTTCCCTCCCCTAGCTCGGGCGCTGTCTaGGTGGACTGGGGGTTGGGATGGTTCGGACGACAG +
Preference number: 6 (lower is better)
Translates to: SQTVPSPSSGAV*VDWGLGWFGRQ
Trigger: CTGTCGTCCGAACCATCCCAACCCCCAGTCCACCCAGACAGCGCCCGAGCTAGGGGAGGGAACGGTCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487848.5
CDS CAA 72 bp GGGTTGCCTTCCTCGACAACGCAGGCAGGAGCCGGCTaGACCGAAGCCTCCACCTCGGTTGCAGGTCCTGCG +
Preference number: 6 (lower is better)
Translates to: GLPSSTTQAGAG*TEASTSVAGPA
Trigger: CGCAGGACCTGCAACCGAGGTGGAGGCTTCGGTCAAGCCGGCTCCTGCCTGCGTTGTCGAGGAAGGCAACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS TCA 72 bp GGTTGCCTTCCTCGACAACGCAGGCAGGAGCCGGCTTaGCCGAAGCCTCCACCTCGGTTGCAGGTCCTGCGT +
Preference number: 6 (lower is better)
Translates to: GCLPRQRRQEPA*PKPPPRLQVLR
Trigger: ACGCAGGACCTGCAACCGAGGTGGAGGCTTCGGTCAAGCCGGCTCCTGCCTGCGTTGTCGAGGAAGGCAACC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS GCA 72 bp GGCAGGAGCCGGCTTGACCGAAGCCTCCACCTCGGTTaGAGGTCCTGCGTAGGATGCGGGACTGCTGCATTC +
Preference number: 6 (lower is better)
Translates to: GRSRLDRSLHLG*RSCVGCGTAAF
Trigger: GAATGCAGCAGTCCCGCATCCTACGCAGGACCTGCAACCGAGGTGGAGGCTTCGGTCAAGCCGGCTCCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS CCA 72 bp ATAGACAGACTTGAGCAGCGAGTCCCGGGGCGACGCTaGCCTCGCTACCTTCCTGGCGCTCACGCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: IDRLEQRVPGRR*PRYLPGAHAAS
Trigger: AGAGGCAGCGTGAGCGCCAGGAAGGTAGCGAGGCCAGCGTCGCCCCGGGACTCGCTGCTCAAGTCTGTCTAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341105.7
CDS CCA 72 bp CGCCTGGTGGGCGACGGGGCCCTGCTAGGATGGATGTaGCGGCAGGCAATAGACAGACTTGAGCAGCGAGTC +
Preference number: 6 (lower is better)
Translates to: RLVGDGALLGWM*RQAIDRLEQRV
Trigger: GACTCGCTGCTCAAGTCTGTCTATTGCCTGCCGCCACATCCATCCTAGCAGGGCCCCGTCGCCCACCAGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000498200.1
CDS CAA 72 bp CGCACAGAGGGGCTTAGCAGGACGGTTAAGGAGTGCTaGAGCAGGGGCCTCGGGAGACCCGAACCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: RTEGLSRTVKEC*SRGLGRPEPAS
Trigger: GGAGGCTGGTTCGGGTCTCCCGAGGCCCCTGCTCAAGCACTCCTTAACCGTCCTGCTAAGCCCCTCTGTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS CAA 90 bp GCTGGAGACGCAGCCCCCGTGGTGCTAGGGTCAGGAGACACTTCTTaGGGTGGCGTGGGTGGGAAGCCGAAAAGGTGGGAGCCAGAGTGG +
Preference number: 6 (lower is better)
Translates to: AGDAAPVVLGSGDTS*GGVGGKPKRWEPEW
Trigger: CCACTCTGGCTCCCACCTTTTCGGCTTCCCACCCACGCCACCCAAAGAAGTGTCTCCTGACCCTAGCACCACGGGGGCTGCGTCTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
CDS TCA 72 bp GCTAGGATGGATGTGGCGGCAGGCAATAGACAGACTTaGGCAGCGAGTCCCGGGGCGACGCTGGCCTCGCTA +
Preference number: 6 (lower is better)
Translates to: ARMDVAAGNRQT*AASPGATLASL
Trigger: TAGCGAGGCCAGCGTCGCCCCGGGACTCGCTGCTCAAGTCTGTCTATTGCCTGCCGCCACATCCATCCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000498200.1
CDS TCA 72 bp GCACAGAGGGGCTTAGCAGGACGGTTAAGGAGTGCTTaGGCAGGGGCCTCGGGAGACCCGAACCAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: AQRGLAGRLRSA*AGASGDPNQPP
Trigger: AGGAGGCTGGTTCGGGTCTCCCGAGGCCCCTGCTCAAGCACTCCTTAACCGTCCTGCTAAGCCCCTCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS GCA 72 bp TGGGCTGCTAAGGGTTTGGTCCACCCATCCCGGGAGTaGCCGGTCCTCGACGTCCATCTGTTCCCTAGCCCA +
Preference number: 6 (lower is better)
Translates to: WAAKGLVHPSRE*PVLDVHLFPSP
Trigger: TGGGCTAGGGAACAGATGGACGTCGAGGACCGGGCACTCCCGGGATGGGTGGACCAAACCCTTAGCAGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000489987.1
CDS GCA 72 bp CCTCGGTTGCAGGTCCTGCGTAGGATGCGGGACTGCTaGATTCTCTGGCGGAAACGAACCCGCCTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: PRLQVLRRMRDC*ILWRKRTRLGE
Trigger: CTCTCCCAGGCGGGTTCGTTTCCGCCAGAGAATGCAGCAGTCCCGCATCCTACGCAGGACCTGCAACCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS GCA 72 bp CCACCTCGGTTGCAGGTCCTGCGTAGGATGCGGGACTaGTGCATTCTCTGGCGGAAACGAACCCGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: PPRLQVLRRMRD*CILWRKRTRLG
Trigger: TCCCAGGCGGGTTCGTTTCCGCCAGAGAATGCAGCAGTCCCGCATCCTACGCAGGACCTGCAACCGAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS GCA 72 bp CGGCTTGACCGAAGCCTCCACCTCGGTTGCAGGTCCTaGGTAGGATGCGGGACTGCTGCATTCTCTGGCGGA +
Preference number: 6 (lower is better)
Translates to: RLDRSLHLGCRS*VGCGTAAFSGG
Trigger: TCCGCCAGAGAATGCAGCAGTCCCGCATCCTACGCAGGACCTGCAACCGAGGTGGAGGCTTCGGTCAAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS CAA 72 bp GCAGCCCCCGTGGTGCTAGGGTCAGGAGACACTTCTTaGGGTGGCGTGGGTGGGAAGCCGAAAAGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: AAPVVLGSGDTS*GGVGGKPKRWE
Trigger: CTCCCACCTTTTCGGCTTCCCACCCACGCCACCCAAAGAAGTGTCTCCTGACCCTAGCACCACGGGGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
CDS CCA 72 bp TTTGTCCGCCTGGTGGGCGACGGGGCCCTGCTAGGATaGATGTGGCGGCAGGCAATAGACAGACTTGAGCAG +
Preference number: 6 (lower is better)
Translates to: FVRLVGDGALLG*MWRQAIDRLEQ
Trigger: CTGCTCAAGTCTGTCTATTGCCTGCCGCCACATCCATCCTAGCAGGGCCCCGTCGCCCACCAGGCGGACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000498200.1
CDS CCA 72 bp GCTAGGGTCAGGAGACACTTCTTTGGGTGGCGTGGGTaGGAAGCCGAAAAGGTGGGAGCCAGAGTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: ARVRRHFFGWRG*EAEKVGARVGC
Trigger: GCAGCCCACTCTGGCTCCCACCTTTTCGGCTTCCCACCCACGCCACCCAAAGAAGTGTCTCCTGACCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
CDS CCA 72 bp CCCCGTGGTGCTAGGGTCAGGAGACACTTCTTTGGGTaGCGTGGGTGGGAAGCCGAAAAGGTGGGAGCCAGA +
Preference number: 6 (lower is better)
Translates to: PRGARVRRHFFG*RGWEAEKVGAR
Trigger: TCTGGCTCCCACCTTTTCGGCTTCCCACCCACGCCACCCAAAGAAGTGTCTCCTGACCCTAGCACCACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
CDS CCA 72 bp TCGTCTGACAATTTGCACAACAGGTGCCGGCTCTTCTaGCGGCCGACTGGGAGGGCAAGGCAGCGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: SSDNLHNRCRLF*RPTGRARQRQQ
Trigger: CTGCTGACGCTGCCTTGCCCTCCCAGTCGGCCGCCAGAAGAGCCGGCACCTGTTGTGCAAATTGTCAGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489987.1
CDS CCA 72 bp GGGACTGCTGCATTCTCTGGCGGAAACGAACCCGCCTaGGAGAGAGAAATGCGACGCCAAGTAGCAGGGCGC +
Preference number: 6 (lower is better)
Translates to: GTAAFSGGNEPA*EREMRRQVAGR
Trigger: GCGCCCTGCTACTTGGCGTCGCATTTCTCTCTCCCAGGCGGGTTCGTTTCCGCCAGAGAATGCAGCAGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS GCA 72 bp GCCAGGGCAGCTGCACTGAAGGGGGATGACTTCTCCTaGATGCACTTTGACAGCTCCTCGAAGCACTCCGCC +
Preference number: 6 (lower is better)
Translates to: ARAAALKGDDFS*MHFDSSSKHSA
Trigger: GGCGGAGTGCTTCGAGGAGCTGTCAAAGTGCATGCAGGAGAAGTCATCCCCCTTCAGTGCAGCTGCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000489987.1
CDS GCA 72 bp AGGTGGTGGTTGTCGTCTGACAATTTGCACAACAGGTaGCGGCTCTTCTGGCGGCCGACTGGGAGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: RWWLSSDNLHNR*RLFWRPTGRAR
Trigger: CCTTGCCCTCCCAGTCGGCCGCCAGAAGAGCCGGCACCTGTTGTGCAAATTGTCAGACGACAACCACCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489987.1
CDS CAA 72 bp AACAGGAGTTCTGCCAGGTCCTTTCAGGCCTTGGGGTaGCCTTCCTCGACAACGCAGGCAGGAGCCGGCTTG +
Preference number: 6 (lower is better)
Translates to: NRSSARSFQALG*PSSTTQAGAGL
Trigger: CAAGCCGGCTCCTGCCTGCGTTGTCGAGGAAGGCAACCCCAAGGCCTGAAAGGACCTGGCAGAACTCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS TCA 72 bp TGGCATAGTAGGGGTTGCCCTGCGAGTCGAGGTGATTaGAGAAGACGTCCACCTCGTCTGGAGGCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: WHSRGCPASRGD*RRRPPRLEAAA
Trigger: AGCTGCTGCCTCCAGACGAGGTGGACGTCTTCTTCAATCACCTCGACTCGCAGGGCAACCCCTACTATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS GCA 72 bp AGGTGGTGGTTGTCGTCTGACAATTTGCACAACAGGTaGCGGCTCTTCTGGCGGCCGACAGTCTTCGCTTGG +
Preference number: 6 (lower is better)
Translates to: RWWLSSDNLHNR*RLFWRPTVFAW
Trigger: CCAAGCGAAGACTGTCGGCCGCCAGAAGAGCCGGCACCTGTTGTGCAAATTGTCAGACGACAACCACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341105.7
ENST00000487848.5
CDS GCA 72 bp CTGCCTGCTCATAAACGAATCCTAGCACGGGGTGCCTaGGTAGACCTGGAGCTCACCACCAGATGTTCCCGA +
Preference number: 6 (lower is better)
Translates to: LPAHKRILARGA*VDLELTTRCSR
Trigger: TCGGGAACATCTGGTGGTGAGCTCCAGGTCTACGCAGGCACCCCGTGCTAGGATTCGTTTATGAGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498200.1
CDS CCA 72 bp CGAGTCGAGGTGATTGAAGAAGACGTCCACCTCGTCTaGAGGCAGCAGCTGCGCGGGTTCCATGTAGTTGTG +
Preference number: 6 (lower is better)
Translates to: RVEVIEEDVHLV*RQQLRGFHVVV
Trigger: CACAACTACATGGAACCCGCGCAGCTGCTGCCTCCAGACGAGGTGGACGTCTTCTTCAATCACCTCGACTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000492608.1
CDS CAA 72 bp AAAGGAAACAGGAGTTCTGCCAGGTCCTTTCAGGCCTaGGGGTTGCCTTCCTCGACAACGCAGGCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: KGNRSSARSFQA*GLPSSTTQAGA
Trigger: GGCTCCTGCCTGCGTTGTCGAGGAAGGCAACCCCAAGGCCTGAAAGGACCTGGCAGAACTCCTGTTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492608.1
CDS CCA 72 bp CCACTTTCCATCTTCATGCTCTCCGTCAGTGACACCTaGTACTTGACGCCGTCCTTGTCCTCTCCTCGGGCT +
Preference number: 6 (lower is better)
Translates to: PLSIFMLSVSDT*YLTPSLSSPRA
Trigger: AGCCCGAGGAGAGGACAAGGACGGCGTCAAGTACCAGGTGTCACTGACGGAGAGCATGAAGATGGAAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
CDS CAA 72 bp AGCTCCTCGAAGCACTCCGCCCCTTTCTTGCTCTTCTaGGACTTGTTGGACATCTTCCGGTTCCGAGTCTGG +
Preference number: 6 (lower is better)
Translates to: SSSKHSAPFLLF*DLLDIFRFRVW
Trigger: CCAGACTCGGAACCGGAAGATGTCCAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGTGCTTCGAGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000489987.1
CDS CAA 90 bp CACTTTGACAGCTCCTCGAAGCACTCCGCCCCTTTCTTGCTCTTCTaGGACTTGTTGGACATCTTCCGGTTCCGAGTCTGGATCCCTTCC +
Preference number: 6 (lower is better)
Translates to: HFDSSSKHSAPFLLF*DLLDIFRFRVWIPS
Trigger: GGAAGGGATCCAGACTCGGAACCGGAAGATGTCCAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGTGCTTCGAGGAGCTGTCAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000489987.1
CDS CAA 90 bp TCCTGCATGCACTTTGACAGCTCCTCGAAGCACTCCGCCCCTTTCTaGCTCTTCTTGGACTTGTTGGACATCTTCCGGTTCCGAGTCTGG +
Preference number: 6 (lower is better)
Translates to: SCMHFDSSSKHSAPF*LFLDLLDIFRFRVW
Trigger: CCAGACTCGGAACCGGAAGATGTCCAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGTGCTTCGAGGAGCTGTCAAAGTGCATGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000489987.1
CDS CCA 72 bp AGCACTCCGCCCCTTTCTTGCTCTTCTTGGACTTGTTaGACATCTTCCGGTTCCGAGTCTGGATCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: STPPLSCSSWTC*TSSGSESGSLP
Trigger: AGGAAGGGATCCAGACTCGGAACCGGAAGATGTCCAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000489987.1
CDS CAA 72 bp TCGAAGCACTCCGCCCCTTTCTTGCTCTTCTTGGACTaGTTGGACATCTTCCGGTTCCGAGTCTGGATCCCT +
Preference number: 6 (lower is better)
Translates to: SKHSAPFLLFLD*LDIFRFRVWIP
Trigger: AGGGATCCAGACTCGGAACCGGAAGATGTCCAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGTGCTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000489987.1
CDS GCA 72 bp ACTTTGACAGCTCCTCGAAGCACTCCGCCCCTTTCTTaGTCTTCTTGGACTTGTTGGACATCTTCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: TLTAPRSTPPLS*SSWTCWTSSGS
Trigger: GGAACCGGAAGATGTCCAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGTGCTTCGAGGAGCTGTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000489987.1
CDS CAA 72 bp CACTTTGACAGCTCCTCGAAGCACTCCGCCCCTTTCTaGCTCTTCTTGGACTTGTTGGACATCTTCCGGTTC +
Preference number: 6 (lower is better)
Translates to: HFDSSSKHSAPF*LFLDLLDIFRF
Trigger: GAACCGGAAGATGTCCAACAAGTCCAAGAAGAGCAAGAAAGGGGCGGAGTGCTTCGAGGAGCTGTCAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341105.7
ENST00000430265.6
ENST00000487848.5
ENST00000489987.1