RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GASK1B (Homo sapiens)

Ensembl gene IDs: ENSG00000164125

Ensembl transcript IDs: ENST00000296530.12, ENST00000393807.9, ENST00000585682.6, ENST00000587787.1, ENST00000589306.1, ENST00000590648.5, ENST00000592057.1, ENST00000592586.1, ENST00000593260.1

Found 552 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTCTACTCTGCTCAGAACAGTCAGTGTGGGCCTGTTGTCCCAATaGCCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGAT +
Preference number: 1 (lower is better)
Translates to: CSTLLRTVSVGLLSQ*PPASPFTPHGSSLD
Trigger: ATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGGGCATTGGGACAACAGGCCCACACTGACTGTTCTGAGCAGAGTAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR CCA 90 bp ATGTCCAATACAGCATTTCCCTGGAACTCTCATATCCTCCCAGGCTaGGAAAATAAAGAATGCCAAGCGCATGGAAAGACACGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: MSNTAFPWNSHILPG*ENKECQAHGKTRCC
Trigger: GCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTATTTTCCCAGCCTGGGAGGATATGAGAGTTCCAGGGAAATGCTGTATTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR TCA 90 bp AAACCCTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTaGGACTCAAAGTTAAAGCCAGCTTCTAAAAAGCCTGTTAGTCCT +
Preference number: 1 (lower is better)
Translates to: KPSRGKTRLPNSIVA*DSKLKPASKKPVSP
Trigger: AGGACTAACAGGCTTTTTAGAAGCTGGCTTTAACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAGGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR TCA 90 bp AGGAAACTGAGGCATAAAGAGACATGGCAACATTTCCAAGTCGTATaGTTGGTAAGTTCAAACCTAGTCAGTCCAACTCCACGGCCCAGG +
Preference number: 1 (lower is better)
Translates to: RKLRHKETWQHFQVV*LVSSNLVSPTPRPR
Trigger: CCTGGGCCGTGGAGTTGGACTGACTAGGTTTGAACTTACCAATCATACGACTTGGAAATGTTGCCATGTCTCTTTATGCCTCAGTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR CCA 90 bp TTCGAGCCCTGGAATAGCTTTAATATTCAGAGAATATCCTTTATATaGCATGGGCATGACCGCAGACCAGTCCTTTTGCTGGCAACTGCA +
Preference number: 1 (lower is better)
Translates to: FEPWNSFNIQRISFI*HGHDRRPVLLLATA
Trigger: TGCAGTTGCCAGCAAAAGGACTGGTCTGCGGTCATGCCCATGCCATATAAAGGATATTCTCTGAATATTAAAGCTATTCCAGGGCTCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR GCA 90 bp CATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTaGCTCCAGCCTAGCTTCCTCTCCTCATCATGCAAATTGCCGTTG +
Preference number: 1 (lower is better)
Translates to: HSNLFNSMPDCQQVL*LQPSFLSSSCKLPL
Trigger: CAACGGCAATTTGCATGATGAGGAGAGGAAGCTAGGCTGGAGGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR GCA 90 bp AAAATGCAAATATGCCACCTTGGTAAGACAGGATGTCAGGCAACTTaGCAAAAGAGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCA +
Preference number: 1 (lower is better)
Translates to: KMQICHLGKTGCQAT*QKSYFKSVAQSRIP
Trigger: TGGAATCCTACTTTGAGCCACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAGGTGGCATATTTGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR CCA 90 bp GTTTTAGTCATAGTCCTATCACGTAACGAAGTAACACATGAGACTTaGAGATTATGTGAGGAATTCAATGAACTTGGTACCTCATGTGCT +
Preference number: 1 (lower is better)
Translates to: VLVIVLSRNEVTHET*RLCEEFNELGTSCA
Trigger: AGCACATGAGGTACCAAGTTCATTGAATTCCTCACATAATCTCCAAGTCTCATGTGTTACTTCGTTACGTGATAGGACTATGACTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR TCA 90 bp AGCCTCTATTGTAACGTTGTTAGTAGTTCTCTTTCACACAGATATTaGGTTAACCTTGACCAGAACAAAGAAAATGTGGTGTATTTCAGC +
Preference number: 1 (lower is better)
Translates to: SLYCNVVSSSLSHRY*VNLDQNKENVVYFS
Trigger: GCTGAAATACACCACATTTTCTTTGTTCTGGTCAAGGTTAACTCAATATCTGTGTGAAAGAGAACTACTAACAACGTTACAATAGAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR CAA 90 bp GGGATCCTGTGCTCTACTCTGCTCAGAACAGTCAGTGTGGGCCTGTaGTCCCAATGCCCACCAGCATCTCCTTTCACGCCACACGGTTCC +
Preference number: 2 (lower is better)
Translates to: GILCSTLLRTVSVGL*SQCPPASPFTPHGS
Trigger: GGAACCGTGTGGCGTGAAAGGAGATGCTGGTGGGCATTGGGACAACAGGCCCACACTGACTGTTCTGAGCAGAGTAGAGCACAGGATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR GCA 90 bp GGGTCTCAGCCACTCCCAGGGATTTTAATCCATTCCATTCTAGGCTCCCTGGGAAAGACACGCTGCTGCTaGTGCTGTCCAAATGTGAAC +
Preference number: 2 (lower is better)
Translates to: GSQPLPGILIHSILGSLGKTRCC*CCPNVN
Trigger: GTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTT...TCCCAGGGAGCCTAGAATGGAATGGATTAAAATCCCTGGGAGTGGCTGAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR GCA 90 bp GCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGATAACCCGCTTCCCCATGGAAAGACACGCTaGTGCTGCTGCTGTCCAAAT +
Preference number: 2 (lower is better)
Translates to: ALRGLRRFHLLKNDNPLPHGKTR*CCCCPN
Trigger: ATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATG...GGGAAGCGGGTTATCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR GCA 90 bp CTTTGCCTCCAGCCTAGCTTCCTCTCCTCATCATGCAAATTGCCGTTGGCTTTAACACGCTGCTGCTGCTaGTGTCCAAATGTGAACCGT +
Preference number: 2 (lower is better)
Translates to: LCLQPSFLSSSCKLPLALTRCCC*CPNVNR
Trigger: ACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGT...TAAAGCCAACGGCAATTTGCATGATGAGGAGAGGAAGCTAGGCTGGAGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR GCA 90 bp GCCCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACTGTCAGCAAGTTCTTTaGCTCCAGCCTAGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: AHQHLLSRHTVPVWIISYCQQVL*LQPSFL
Trigger: GAGGAAGCTAGGCTGGAGGCAAAGAACTTGCTGACA...GTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR GCA 90 bp GCCCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACCCTTTTGCTGGCAACTaGAGTAACTGGCTACATGTG +
Preference number: 2 (lower is better)
Translates to: AHQHLLSRHTVPVWIISYPFAGN*SNWLHV
Trigger: CACATGTAGCCAGTTACTGCAGTTGCCAGCAAAAGG...GTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CCA 90 bp GGGTCTCAGCCACTCCCAGGGATTTTAATCCATTCCATTCTAGGCTCCCTGGGAGTGAAGCGAGGGAAATaGAGAGCAAAGATTATACAG +
Preference number: 2 (lower is better)
Translates to: GSQPLPGILIHSILGSLGVKRGK*RAKIIQ
Trigger: CTGTATAATCTTTGCTCTCCATTTCCCTCGCTTCAC...TCCCAGGGAGCCTAGAATGGAATGGATTAAAATCCCTGGGAGTGGCTGAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR GCA 90 bp GCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGATAACCCGCTTCCCGTATGGGCTTACTCTTaGATGTCCAATACAGCATTT +
Preference number: 2 (lower is better)
Translates to: ALRGLRRFHLLKNDNPLPVWAYS*MSNTAF
Trigger: AAATGCTGTATTGGACATGCAAGAGTAAGCCCATAC...GGGAAGCGGGTTATCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CCA 90 bp AACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCTCCAGCCTAGCAGAATGCCAAGCGCATaGAAAGACACGCTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: NLFNSMPDCQQVLCLQPSRMPSA*KDTLLL
Trigger: CAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCT...GCTAGGCTGGAGGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CCA 90 bp GGGTCTCAGCCACTCCCAGGGATTTTAATCCATTCCATTCTAGGCTCCCTGGGATACATTTTAGCCTCTTaGGCCAATCTGGATTCAAAG +
Preference number: 2 (lower is better)
Translates to: GSQPLPGILIHSILGSLGYILAS*ANLDSK
Trigger: CTTTGAATCCAGATTGGCCCAAGAGGCTAAAATGTA...TCCCAGGGAGCCTAGAATGGAATGGATTAAAATCCCTGGGAGTGGCTGAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR CAA 90 bp CTTTGCCTCCAGCCTAGCTTCCTCTCCTCATCATGCAAATTGCCGTaGGCTTTAATTAGATTTAATAAGCCACTGGGAAGTGAAGCGAGG +
Preference number: 2 (lower is better)
Translates to: LCLQPSFLSSSCKLP*ALIRFNKPLGSEAR
Trigger: CCTCGCTTCACTTCCCAGTGGCTTATTAAATCTAATTAAAGCCAACGGCAATTTGCATGATGAGGAGAGGAAGCTAGGCTGGAGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR GCA 90 bp TTAAGTATCCTTTCAGCTTATAATCTCTTTGGGGTACATTTTAGCCTCTTGGGCGGAAAGACACGCTGCTaGTGCTGCTGTCCAAATGTG +
Preference number: 2 (lower is better)
Translates to: LSILSAYNLFGVHFSLLGGKTRC*CCCPNV
Trigger: CACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCC...GCCCAAGAGGCTAAAATGTACCCCAAAGAGATTATAAGCTGAAAGGATACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR GCA 90 bp GCCCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACACCTATTTAATAGTATaGCTGACTGTCAGCAAGTTC +
Preference number: 2 (lower is better)
Translates to: AHQHLLSRHTVPVWIISYTYLIV*LTVSKF
Trigger: GAACTTGCTGACAGTCAGGCATACTATTAAATAGGT...GTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTCCAATTCTCAATATCTaGGCAGTAACCATTAAATCA +
Preference number: 2 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVPILNI*AVTIKS
Trigger: TGATTTAATGGTTACTGCCCAGATATTGAGAATTGG...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CCA 90 bp TTAAGTATCCTTTCAGCTTATAATCTCTTTGGGGTACATTTTAGCCTCTTGGGCGGGTTAAACCTAACATaGTCTGGCTCTGCGCGGCTT +
Preference number: 2 (lower is better)
Translates to: LSILSAYNLFGVHFSLLGGLNLT*SGSARL
Trigger: AAGCCGCGCAGAGCCAGACCATGTTAGGTTTAACCC...GCCCAAGAGGCTAAAATGTACCCCAAAGAGATTATAAGCTGAAAGGATACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CCA 90 bp CCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATCCTCTTGGGCCAATCTaGATTCAAAGTTGTAACTTC +
Preference number: 2 (lower is better)
Translates to: PPASPFTPHGSSLDNKLHPLGPI*IQSCNF
Trigger: GAAGTTACAACTTTGAATCCAGATTGGCCCAAGAGG...ATGTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR TCA 90 bp CCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATAAGACGGGAGAATCTTaGAAGACAGACTCAATAGAT +
Preference number: 2 (lower is better)
Translates to: PPASPFTPHGSSLDNKLHKTGES*KTDSID
Trigger: ATCTATTGAGTCTGTCTTTCAAGATTCTCCCGTCTT...ATGTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR GCA 90 bp CCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATACATGTGTTAGAACCTaGCAAAATGTTTGTCACCCA +
Preference number: 2 (lower is better)
Translates to: PPASPFTPHGSSLDNKLHTCVRT*QNVCHP
Trigger: TGGGTGACAAACATTTTGGCAGGTTCTAACACATGT...ATGTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATGTTCCCATTAGTATTTaGTCAGAACAGTCAAAACGG +
Preference number: 2 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDVPISI*SEQSKR
Trigger: CCGTTTTGACTGTTCTGACCAAATACTAATGGGAAC...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CCA 90 bp AGTTATGTTCTGAAGTTTGCTGGGTCTATAGTCAAAACCCAGCTTAGCCACCTAGAAGGTTTCTTACATTaGCATAACTGTGGTGGACTG +
Preference number: 2 (lower is better)
Translates to: SYVLKFAGSIVKTQLSHLEGFLH*HNCGGL
Trigger: CAGTCCACCACAGTTATGCCAATGTAAGAAACCTTC...TAGGTGGCTAAGCTGGGTTTTGACTATAGACCCAGCAAACTTCAGAACATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR TCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGCTTTCACACAGATATTaGGTTAACCTTGACCAGAAC +
Preference number: 2 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVLSHRY*VNLDQN
Trigger: GTTCTGGTCAAGGTTAACTCAATATCTGTGTGAAAG...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCCACTAGATACAAATTaGACCAAAATAGAGAGAGTA +
Preference number: 2 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDPLDTN*TKIERV
Trigger: TACTCTCTCTATTTTGGTCCAATTTGTATCTAGTGG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTACGTATTCATCTACACTaGCTCATTGCTAAACGGGCT +
Preference number: 2 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLRIHLH*LIAKRA
Trigger: AGCCCGTTTAGCAATGAGGCAGTGTAGATGAATACG...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CCA 90 bp GGAGATTATGTGAGGAATTCAATGAACTTGGTACCTCATGTGCTTGGTACAATACATATCCTCCCAGGCTaGGAAAATAAAGAATGCCAA +
Preference number: 2 (lower is better)
Translates to: GDYVRNSMNLVPHVLGTIHILPG*ENKECQ
Trigger: TTGGCATTCTTTATTTTCCCAGCCTGGGAGGATATG...TATTGTACCAAGCACATGAGGTACCAAGTTCATTGAATTCCTCACATAATCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CCA 90 bp TTACATATTCACCTAAGTCCAGTGGCTAAGAAGTTATGTTCTGAAGTTTGCTGGGATTTAATAAGCCACTaGGAAGTGAAGCGAGGGAAA +
Preference number: 2 (lower is better)
Translates to: LHIHLSPVAKKLCSEVCWDLISH*EVKRGK
Trigger: TTTCCCTCGCTTCACTTCCCAGTGGCTTATTAAATC...CCAGCAAACTTCAGAACATAACTTCTTAGCCACTGGACTTAGGTGAATATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCCGTATTCATCTACACTaGCTCATTGCTAAACGGGCT +
Preference number: 2 (lower is better)
Translates to: INMFLGLSFNKHFGITGGRIHLH*LIAKRA
Trigger: AGCCCGTTTAGCAATGAGGCAGTGTAGATGAATACG...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR TCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAAGTCATGAGGAAAATTaGTCAGACGCAGGTTTTAAC +
Preference number: 2 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLSHEEN*SDAGFN
Trigger: GTTAAAACCTGCGTCTGATCAATTTTCCTCATGACT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR TCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCAAATCCCAGAGACAGTaGGTAAAAGTGGAGACTCAA +
Preference number: 2 (lower is better)
Translates to: INMFLGLSFNKHFGITGGKSQRQ*VKVETQ
Trigger: TTGAGTCTCCACTTTTACTCACTGTCTCTGGGATTT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CCA 90 bp TTAAGTATCCTTTCAGCTTATAATCTCTTTGGGGTACATTTTAGCCTCTTGGGCAAAGATTATACAGTATaGGCTTACTCTTGCATGTCC +
Preference number: 2 (lower is better)
Translates to: LSILSAYNLFGVHFSLLGKDYTV*AYSCMS
Trigger: GGACATGCAAGAGTAAGCCCATACTGTATAATCTTT...GCCCAAGAGGCTAAAATGTACCCCAAAGAGATTATAAGCTGAAAGGATACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR TCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCAGTCATGAGGAAAATTaGTCAGACGCAGGTTTTAAC +
Preference number: 2 (lower is better)
Translates to: INMFLGLSFNKHFGITGGSHEEN*SDAGFN
Trigger: GTTAAAACCTGCGTCTGATCAATTTTCCTCATGACT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCGTTCCCATTAGTATTTaGTCAGAACAGTCAAAACGG +
Preference number: 2 (lower is better)
Translates to: INMFLGLSFNKHFGITGGVPISI*SEQSKR
Trigger: CCGTTTTGACTGTTCTGACCAAATACTAATGGGAAC...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR CAA 90 bp TCTGAATTTGAAACTCCATGTGAATATCTACCATATGTGATGATCTaGGATATTGGCAAAGGACATAAAGATGCAACACATGAACCTGAT +
Preference number: 2 (lower is better)
Translates to: SEFETPCEYLPYVMI*DIGKGHKDATHEPD
Trigger: ATCAGGTTCATGTGTTGCATCTTTATGTCCTTTGCCAATATCCAAGATCATCACATATGGTAGATATTCACATGGAGTTTCAAATTCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCCCACTAGATACAAATTaGACCAAAATAGAGAGAGTA +
Preference number: 2 (lower is better)
Translates to: INMFLGLSFNKHFGITGGPLDTN*TKIERV
Trigger: TACTCTCTCTATTTTGGTCCAATTTGTATCTAGTGG...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR GCA 72 bp CTGCTCAGAACAGTCAGTGTGGGCCTGTTGTCCCAATaGCCACCAGCATCTCCTTTCACGCCACACGGTTCC +
Preference number: 3 (lower is better)
Translates to: LLRTVSVGLLSQ*PPASPFTPHGS
Trigger: GGAACCGTGTGGCGTGAAAGGAGATGCTGGTGGGCATTGGGACAACAGGCCCACACTGACTGTTCTGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR GCA 72 bp AAAGAATGCCAAGCGCATGGAAAGACACGCTGCTGCTaGTGCTGTCCAAATGTGAACCGTGGGTGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: KECQAHGKTRCC*CCPNVNRGWRK
Trigger: TTTTCTCCACCCACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR GCA 72 bp AATAAAGAATGCCAAGCGCATGGAAAGACACGCTGCTaGTGCTGCTGTCCAAATGTGAACCGTGGGTGGAGA +
Preference number: 3 (lower is better)
Translates to: NKECQAHGKTRC*CCCPNVNRGWR
Trigger: TCTCCACCCACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR GCA 72 bp GAAAATAAAGAATGCCAAGCGCATGGAAAGACACGCTaGTGCTGCTGCTGTCCAAATGTGAACCGTGGGTGG +
Preference number: 3 (lower is better)
Translates to: ENKECQAHGKTR*CCCCPNVNRGW
Trigger: CCACCCACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR GCA 72 bp AATGAATGGGATTTCAGCATAACAAGGGGGATCCTGTaGTCTACTCTGCTCAGAACAGTCAGTGTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: NEWDFSITRGIL*STLLRTVSVGL
Trigger: CAGGCCCACACTGACTGTTCTGAGCAGAGTAGAGCACAGGATCCCCCTTGTTATGCTGAAATCCCATTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CAA 90 bp GCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGATAACCCGCTTCCCAGTATGGGCTTACTCTaGCATGTCCAATACAGCATT +
Preference number: 3 (lower is better)
Translates to: ALRGLRRFHLLKNDNPLPSMGLL*HVQYSI
Trigger: AATGCTGTATTGGACATGCAAGAGTAAGCCCATACT...GGGAAGCGGGTTATCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR TCA 72 bp CGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTaGGACTCAAAGTTAAAGCCAGCTTCTAAAAAGCCT +
Preference number: 3 (lower is better)
Translates to: RGKTRLPNSIVA*DSKLKPASKKP
Trigger: AGGCTTTTTAGAAGCTGGCTTTAACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR CCA 72 bp CCGCAGACCAGTCCTTTTGCTGGCAACTGCAGTAACTaGCTACATGTGTTAGAACCTGCCAAAATGTTTGTC +
Preference number: 3 (lower is better)
Translates to: PQTSPFAGNCSN*LHVLEPAKMFV
Trigger: GACAAACATTTTGGCAGGTTCTAACACATGTAGCCAGTTACTGCAGTTGCCAGCAAAAGGACTGGTCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATATCTACACTGCCTCATaGCTAAACGGGCTTGAGGTT +
Preference number: 3 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDIYTAS*LNGLEV
Trigger: AACCTCAAGCCCGTTTAGCAATGAGGCAGTGTAGAT...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGCCTCTATTGTAACGTaGTTAGTAGTTCTCTTTCAC +
Preference number: 3 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVASIVT*LVVLFH
Trigger: GTGAAAGAGAACTACTAACAACGTTACAATAGAGGC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTATCAGCTCTGATGCTCTaGCAGGCTGTAAGCCTCAGT +
Preference number: 3 (lower is better)
Translates to: VVYFSNNRRNREKTGENVSALML*QAVSLS
Trigger: ACTGAGGCTTACAGCCTGCAAGAGCATCAGAGCTGA...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp CCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATCTGACTCACTGTACTTaGTATTCGAGCCCTGGAATA +
Preference number: 3 (lower is better)
Translates to: PPASPFTPHGSSLDNKLHLTHCT*YSSPGI
Trigger: TATTCCAGGGCTCGAATACAAAGTACAGTGAGTCAG...ATGTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CAA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGTGTTCCAATGTAGAGTaGCCTCAGGGTAGTGTAGAG +
Preference number: 3 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVCSNVE*PQGSVE
Trigger: CTCTACACTACCCTGAGGCAACTCTACATTGGAACA...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATGTCAGTGTCTCTGGTTaGCAGTTTTCTATTAAACAG +
Preference number: 3 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDVSVSG*QFSIKQ
Trigger: CTGTTTAATAGAAAACTGCAAACCAGAGACACTGAC...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTATGTTCCAATGTAGAGTaGCCTCAGGGTAGTGTAGAG +
Preference number: 3 (lower is better)
Translates to: VVYFSNNRRNREKTGENVCSNVE*PQGSVE
Trigger: CTCTACACTACCCTGAGGCAACTCTACATTGGAACA...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTATCAGCTCTGATGCTCTaGCAGGCTGTAAGCCTCAGT +
Preference number: 3 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLSALML*QAVSLS
Trigger: ACTGAGGCTTACAGCCTGCAAGAGCATCAGAGCTGA...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCCATATGTGATGATCTaGGATATTGGCAAAGGACAT +
Preference number: 3 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDPYVMI*DIGKGH
Trigger: ATGTCCTTTGCCAATATCCAAGATCATCACATATGG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR GCA 72 bp ATATGCCACCTTGGTAAGACAGGATGTCAGGCAACTTaGCAAAAGAGTTATTTCAAGTCAGTGGCTCAAAGT +
Preference number: 3 (lower is better)
Translates to: ICHLGKTGCQAT*QKSYFKSVAQS
Trigger: ACTTTGAGCCACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAGGTGGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp TTACATATTCACCTAAGTCCAGTGGCTAAGAAGTTATGTTCTGAAGTTTGCTGGAACCTGCCAAAATGTTaGTCACCCAAGACGGGAGAA +
Preference number: 3 (lower is better)
Translates to: LHIHLSPVAKKLCSEVCWNLPKC*SPKTGE
Trigger: TTCTCCCGTCTTGGGTGACAAACATTTTGGCAGGTT...CCAGCAAACTTCAGAACATAACTTCTTAGCCACTGGACTTAGGTGAATATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR TCA 72 bp AGGCATAAAGAGACATGGCAACATTTCCAAGTCGTATaGTTGGTAAGTTCAAACCTAGTCAGTCCAACTCCA +
Preference number: 3 (lower is better)
Translates to: RHKETWQHFQVV*LVSSNLVSPTP
Trigger: TGGAGTTGGACTGACTAGGTTTGAACTTACCAATCATACGACTTGGAAATGTTGCCATGTCTCTTTATGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR GCA 72 bp ATGGAGAGCAAAGATTATACAGTATGGGCTTACTCTTaGATGTCCAATACAGCATTTCCCTGGAACTCTCAT +
Preference number: 3 (lower is better)
Translates to: MESKDYTVWAYS*MSNTAFPWNSH
Trigger: ATGAGAGTTCCAGGGAAATGCTGTATTGGACATGCAAGAGTAAGCCCATACTGTATAATCTTTGCTCTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR CCA 72 bp GTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTaGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGT +
Preference number: 3 (lower is better)
Translates to: VRQLAKRVISSQ*LKVGFQSPNFC
Trigger: ACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR CCA 72 bp TGGAATAGCTTTAATATTCAGAGAATATCCTTTATATaGCATGGGCATGACCGCAGACCAGTCCTTTTGCTG +
Preference number: 3 (lower is better)
Translates to: WNSFNIQRISFI*HGHDRRPVLLL
Trigger: CAGCAAAAGGACTGGTCTGCGGTCATGCCCATGCCATATAAAGGATATTCTCTGAATATTAAAGCTATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAATCTACACTGCCTCATaGCTAAACGGGCTTGAGGTT +
Preference number: 3 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLIYTAS*LNGLEV
Trigger: AACCTCAAGCCCGTTTAGCAATGAGGCAGTGTAGAT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGTCAGTGTCTCTGGTTaGCAGTTTTCTATTAAACAG +
Preference number: 3 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVVSVSG*QFSIKQ
Trigger: CTGTTTAATAGAAAACTGCAAACCAGAGACACTGAC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTATGTTCCAATGTAGAGTaGCCTCAGGGTAGTGTAGAG +
Preference number: 3 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLCSNVE*PQGSVE
Trigger: CTCTACACTACCCTGAGGCAACTCTACATTGGAACA...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAACACATGAACCTGATTaGTCCATGTCTTCCAATCTG +
Preference number: 3 (lower is better)
Translates to: VVYFSNNRRNREKTGENVTHEPD*SMSSNL
Trigger: CAGATTGGAAGACATGGACAAATCAGGTTCATGTGT...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp AGTTATGTTCTGAAGTTTGCTGGGTCTATAGTCAAAACCCAGCTTAGCCACCTACAGCTTATAATCTCTTaGGGGTACATTTTAGCCTCT +
Preference number: 3 (lower is better)
Translates to: SYVLKFAGSIVKTQLSHLQLIIS*GYILAS
Trigger: AGAGGCTAAAATGTACCCCAAAGAGATTATAAGCTG...TAGGTGGCTAAGCTGGGTTTTGACTATAGACCCAGCAAACTTCAGAACATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CAA 90 bp TTAAGTATCCTTTCAGCTTATAATCTCTTTGGGGTACATTTTAGCCTCTTGGGCCAAGACGGGAGAATCTaGAAAGACAGACTCAATAGA +
Preference number: 3 (lower is better)
Translates to: LSILSAYNLFGVHFSLLGQDGRI*KDRLNR
Trigger: TCTATTGAGTCTGTCTTTCAAGATTCTCCCGTCTTG...GCCCAAGAGGCTAAAATGTACCCCAAAGAGATTATAAGCTGAAAGGATACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAACACATGAACCTGATTaGTCCATGTCTTCCAATCTG +
Preference number: 3 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLTHEPD*SMSSNL
Trigger: CAGATTGGAAGACATGGACAAATCAGGTTCATGTGT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp TTAAGTATCCTTTCAGCTTATAATCTCTTTGGGGTACATTTTAGCCTCTTGGGCTCCTCATCATGCAAATaGCCGTTGGCTTTAATTAGA +
Preference number: 3 (lower is better)
Translates to: LSILSAYNLFGVHFSLLGSSSCK*PLALIR
Trigger: TCTAATTAAAGCCAACGGCAATTTGCATGATGAGGA...GCCCAAGAGGCTAAAATGTACCCCAAAGAGATTATAAGCTGAAAGGATACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR CCA 72 bp AGTATTTGGTCAGAACAGTCAAAACGGCACAAAATATaGTTTATTAATGGAGTCAGTGTCTCTGGTTTGCAG +
Preference number: 3 (lower is better)
Translates to: SIWSEQSKRHKI*FINGVSVSGLQ
Trigger: CTGCAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTGTTCTGACCAAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR CCA 72 bp ATAGTCCTATCACGTAACGAAGTAACACATGAGACTTaGAGATTATGTGAGGAATTCAATGAACTTGGTACC +
Preference number: 3 (lower is better)
Translates to: IVLSRNEVTHET*RLCEEFNELGT
Trigger: GGTACCAAGTTCATTGAATTCCTCACATAATCTCCAAGTCTCATGTGTTACTTCGTTACGTGATAGGACTAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGTCAGTGTCTCTGGTTaGCAGTTTTCTATTAAACAG +
Preference number: 3 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLVSVSG*QFSIKQ
Trigger: CTGTTTAATAGAAAACTGCAAACCAGAGACACTGAC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGCCTCTATTGTAACGTaGTTAGTAGTTCTCTTTCAC +
Preference number: 3 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLASIVT*LVVLFH
Trigger: GTGAAAGAGAACTACTAACAACGTTACAATAGAGGC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR-3UTR CAA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCCCATATGTGATGATCTaGGATATTGGCAAAGGACAT +
Preference number: 3 (lower is better)
Translates to: INMFLGLSFNKHFGITGGPYVMI*DIGKGH
Trigger: ATGTCCTTTGCCAATATCCAAGATCATCACATATGG...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR TCA 72 bp TCAGATGAATGCTCTAAATGTGTGCTTGTTCTGTGCTaGCATAAACATAAGAATTTCATAAGACAGTGTGTA +
Preference number: 3 (lower is better)
Translates to: SDECSKCVLVLC*HKHKNFIRQCV
Trigger: TACACACTGTCTTATGAAATTCTTATGTTTATGTCAGCACAGAACAAGCACACATTTAGAGCATTCATCTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585682.6
CDS-3UTR CCA 90 bp TGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTGCTGTCCAAATGTGAACCGTGGGCTGCAGGAAGTCTaGGCCCCCGGCTCGCACTCC +
Preference number: 4 (lower is better)
Translates to: CQAHGKTRCCCCCPNVNRGLQEV*APGSHS
Trigger: GGAGTGCGAGCCGGGGGCCCAGACTTCCTGCAGCCC...ACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp GCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGATAACCCGCTTCCCGCCGCCTGTCCATGCTaGAGAGAGGCCCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: ALRGLRRFHLLKNDNPLPAACPC*REALPT
Trigger: GGTGGGGAGGGCCTCTCTCCAGCATGGACAGGCGGC...GGGAAGCGGGTTATCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CCAGGCTGGGAAAATAAAGAATGCCAAGCGCATGGAAAGACACGCTGCTGCTGCGTCGCGGCTGCGATGTaGCCCCTTCTCAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PGWENKECQAHGKTRCCCVAAAM*PLLSRL
Trigger: CAGGCGGCTGAGAAGGGGCCACATCGCAGCCGCGAC...GCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTATTTTCCCAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTTCCCTGGAGCTGGGCTaGAGGAAGTCTGGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVSLELG*RKSGPP
Trigger: CGGGGGCCCAGACTTCCTGCAGCCCAGCTCCAGGGA...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGTCGCGGCTGCGATGTaGCCCCTTCTCAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVVAAAM*PLLSRL
Trigger: CAGGCGGCTGAGAAGGGGCCACATCGCAGCCGCGAC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTAACATGGTCTGGCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGACGGCGGTGTCGCGGCTaGGATGTGGCCCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LTWSGSARLKKIPSAQERRRCRG*DVAPSQ
Trigger: CTGAGAAGGGGCCACATCGCAGCCGCGACACCGCCG...TCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGCCAGACCATGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTAACATGGTCTGGCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGACCGACCAAAGCCTCCTaGCCTGGGGCAGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: LTWSGSARLKKIPSAQERPTKAS*PGAADA
Trigger: GGCATCGGCTGCCCCAGGGCAGGAGGCTTTGGTCGG...TCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGCCAGACCATGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTAACATGGTCTGGCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGACACAGGCCGGAGCCCTaGCACTGCGCTGTCCGCCAA +
Preference number: 4 (lower is better)
Translates to: LTWSGSARLKKIPSAQERHRPEP*HCAVRQ
Trigger: TTGGCGGACAGCGCAGTGGCAGGGCTCCGGCCTGTG...TCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGCCAGACCATGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGTGGACCCATTGCCCTaGGACTCTGGAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVVDPLP*DSGGAR
Trigger: CCTGGCCCCTCCAGAGTCCCAGGGCAATGGGTCCAC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp TGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTGCTGTCCAAATGTGAACCGTCTGCGGCTGAAGGGATaGTCCGACCAAAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CQAHGKTRCCCCCPNVNRLRLKG*SDQSLL
Trigger: CAGGAGGCTTTGGTCGGACCATCCCTTCAGCCGCAG...ACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp GCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGATAACCCGCTTCCCACGGCAGGGTCCTGTTaGGCCCCAGGATCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: ALRGLRRFHLLKNDNPLPTAGSC*APGSCL
Trigger: TAGACAGGATCCTGGGGCTCAACAGGACCCTGCCGT...GGGAAGCGGGTTATCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTTTGCCTCCAGCCTAGCTTCCTCTCCTCATCATGCAAATTGCCGTTGGCTTTATCAGCCGCCTGTCCATaGTGGAGAGAGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LCLQPSFLSSSCKLPLALSAACP*WREALP
Trigger: GGGGAGGGCCTCTCTCCAGCATGGACAGGCGGCTGA...TAAAGCCAACGGCAATTTGCATGATGAGGAGAGGAAGCTAGGCTGGAGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGCAGAGTGGACCCATTaGCCTGGGACTCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVAEWTH*PGTLEG
Trigger: CCCCTCCAGAGTCCCAGGGCAATGGGTCCACTCTGC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGTTTCTCCGGGTCCTTaGACGCCGGCTGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVVSPGP*TPAAPE
Trigger: CTCTGGAGCAGCCGGCGTCCAAGGACCCGGAGAAAC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTACGGCAGGGTCCTGTTaGGCCCCAGGATCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVTAGSC*APGSCL
Trigger: TAGACAGGATCCTGGGGCTCAACAGGACCCTGCCGT...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCGGCGGTGTCGCGGCTaGGATGTGGCCCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDRRCRG*DVAPSQ
Trigger: CTGAGAAGGGGCCACATCGCAGCCGCGACACCGCCG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGCTTGGGCTTCACGGTaGCACGGATATTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVAWASR*HGYWPA
Trigger: AGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCACAGGCCGGAGCCCTaGCACTGCGCTGTCCGCCAA +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDHRPEP*HCAVRQ
Trigger: TTGGCGGACAGCGCAGTGGCAGGGCTCCGGCCTGTG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATGCCGCCTGTCCATGCTaGAGAGAGGCCCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDAACPC*REALPT
Trigger: GGTGGGGAGGGCCTCTCTCCAGCATGGACAGGCGGC...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTTATCTCAGGGAAGGATaGCTCGGCGGTGTCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVYLREG*LGGVAA
Trigger: AGCCGCGACACCGCCGAGCCATCCTTCCCTGAGATA...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CCAGGCTGGGAAAATAAAGAATGCCAAGCGCATGGAAAGACACGCTGCTGCTGCCATTGGGCTGCAGAGTaGACCCATTGCCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PGWENKECQAHGKTRCCCHWAAE*THCPGT
Trigger: AGTCCCAGGGCAATGGGTCCACTCTGCAGCCCAATG...GCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTATTTTCCCAGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp ATAAAGAATGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTGCTGTCCAAATGCGGTGCCACGGATATTaGCCGGCTTGCTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: IKNAKRMERHAAAAAVQMRCHGY*PACCAW
Trigger: CCAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCG...CATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR CAA 72 bp TGCTCTACTCTGCTCAGAACAGTCAGTGTGGGCCTGTaGTCCCAATGCCCACCAGCATCTCCTTTCACGCCA +
Preference number: 4 (lower is better)
Translates to: CSTLLRTVSVGL*SQCPPASPFTP
Trigger: TGGCGTGAAAGGAGATGCTGGTGGGCATTGGGACAACAGGCCCACACTGACTGTTCTGAGCAGAGTAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp GGGTCTCAGCCACTCCCAGGGATTTTAATCCATTCCATTCTAGGCTCCCTGGGATTTCCTGACTTCAGCTaGCGCGTCCGCTTCGGGATA +
Preference number: 4 (lower is better)
Translates to: GSQPLPGILIHSILGSLGFPDFS*RVRFGI
Trigger: TATCCCGAAGCGGACGCGGCAGCTGAAGTCAGGAAA...TCCCAGGGAGCCTAGAATGGAATGGATTAAAATCCCTGGGAGTGGCTGAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CCAGGCTGGGAAAATAAAGAATGCCAAGCGCATGGAAAGACACGCTGCTGCTGCCTGCATGCTTTTTCCTaGGCTTGGGCTTCACGGTGC +
Preference number: 4 (lower is better)
Translates to: PGWENKECQAHGKTRCCCLHAFS*AWASRC
Trigger: GCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAG...GCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTATTTTCCCAGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTCCCTGGGGCAGCCGATaGCACTGCATGCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVPWGSR*HCMLFP
Trigger: AGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGG...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGGAAGCCCAAGTAGATaGCACACGCAGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVGSPSR*HTQCPA
Trigger: TGCTGGGCACTGCGTGTGCCATCTACTTGGGCTTCC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGCTTTTTCCTGCGCTTaGGCTTCACGGTGCCACGGA +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVAFSCA*ASRCHG
Trigger: TCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGGGCTGCAGGAAGTCTaGGCCCCCGGCTCGCACTCC +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVGLQEV*APGSHS
Trigger: GGAGTGCGAGCCGGGGGCCCAGACTTCCTGCAGCCC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp TGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTGCTGTCCAAATGTGAACCGTGGGTTAAACCTAACATaGTCTGGCTCTGCGCGGCTT +
Preference number: 4 (lower is better)
Translates to: CQAHGKTRCCCCCPNVNRGLNLT*SGSARL
Trigger: AAGCCGCGCAGAGCCAGACCATGTTAGGTTTAACCC...ACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATGCAGAGTGGACCCATTaGCCTGGGACTCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PPASPFTPHGSSLDNKLHAEWTH*PGTLEG
Trigger: CCCCTCCAGAGTCCCAGGGCAATGGGTCCACTCTGC...ATGTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTCTGCATGCTTTTTCCTaGGCTTGGGCTTCACGGTGC +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVLHAFS*AWASRC
Trigger: GCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAG...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGCCGACCAAAGCCTCCTaGCCTGGGGCAGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVPTKAS*PGAADA
Trigger: GGCATCGGCTGCCCCAGGGCAGGAGGCTTTGGTCGG...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTAACATGGTCTGGCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGATTCGGATGTCATCTTTaGTCAGCCAGGAGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LTWSGSARLKKIPSAQERFGCHL*SARRGR
Trigger: GCGCCCCCTCCTGGCTGAGCAAAGATGACATCCGAA...TCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGCCAGACCATGTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTTTGCCTCCAGCCTAGCTTCCTCTCCTCATCATGCAAATTGCCGTTGGCTTTACTCATGTCCAAGGGCTaGTTGAGAAGCCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: LCLQPSFLSSSCKLPLALLMSKG*LRSPQG
Trigger: CCCCTGTGGGCTTCTCAAGCAGCCCTTGGACATGAG...TAAAGCCAACGGCAATTTGCATGATGAGGAGAGGAAGCTAGGCTGGAGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp TGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTGCTGTCCAAATGTGAACCGTCATGGAAAGACACGCTaGTGCTGCTGCTGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: CQAHGKTRCCCCCPNVNRHGKTR*CCCCPN
Trigger: ATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATG...ACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp TGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTGCTGTCCAAATGTGAACCGTATAAGTGGTCTCCAGTaGGCAGAGGTGGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: CQAHGKTRCCCCCPNVNRISGLQ*AEVEGK
Trigger: CTTTCCTTCCACCTCTGCCCACTGGAGACCACTTAT...ACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp GGGTCTCAGCCACTCCCAGGGATTTTAATCCATTCCATTCTAGGCTCCCTGGGAGCTTCGGGATATAAGTaGTCTCCAGTGGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GSQPLPGILIHSILGSLGASGYK*SPVGRG
Trigger: ACCTCTGCCCACTGGAGACCACTTATATCCCGAAGC...TCCCAGGGAGCCTAGAATGGAATGGATTAAAATCCCTGGGAGTGGCTGAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp GCCCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACGGAAGCCCAAGTAGATaGCACACGCAGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AHQHLLSRHTVPVWIISYGSPSR*HTQCPA
Trigger: TGCTGGGCACTGCGTGTGCCATCTACTTGGGCTTCC...GTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGCCGCCTGTCCATGCTaGAGAGAGGCCCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVAACPC*REALPT
Trigger: GGTGGGGAGGGCCTCTCTCCAGCATGGACAGGCGGC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp AACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCTCCAGCCTAGCGTGGACCCATTGCCCTaGGACTCTGGAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NLFNSMPDCQQVLCLQPSVDPLP*DSGGAR
Trigger: CCTGGCCCCTCCAGAGTCCCAGGGCAATGGGTCCAC...GCTAGGCTGGAGGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCGGTGCCACGGATATTaGCCGGCTTGCTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDRCHGY*PACCAW
Trigger: CCAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp ATAAAGAATGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTGCTGTCCAAATGGCTTTTTCCTGCGCTTaGGCTTCACGGTGCCACGGA +
Preference number: 4 (lower is better)
Translates to: IKNAKRMERHAAAAAVQMAFSCA*ASRCHG
Trigger: TCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGC...CATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTAACCCGATTCAGGCTTaGGTACTCGGCCATTCTGCC +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVNPIQA*VLGHSA
Trigger: GGCAGAATGGCCGAGTACCCAAGCCTGAATCGGGTT...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CCAGGCTGGGAAAATAAAGAATGCCAAGCGCATGGAAAGACACGCTGCTGCTGCAGAATGCCAAGCGCATaGAAAGACACGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PGWENKECQAHGKTRCCCRMPSA*KDTLLL
Trigger: CAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCT...GCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTATTTTCCCAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp GCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGATAACCCGCTTCCCTATATGGCATGGGCATaGCCGCAGACCAGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ALRGLRRFHLLKNDNPLPYMAWA*PQTSPF
Trigger: AAAAGGACTGGTCTGCGGTCATGCCCATGCCATATA...GGGAAGCGGGTTATCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGTCAGCCGCCTGTCCATaGTGGAGAGAGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVSAACP*WREALP
Trigger: GGGGAGGGCCTCTCTCCAGCATGGACAGGCGGCTGA...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATGGATATTGGCCGGCTTaGTGCGCTTGGAGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDGYWPA*CAWSVG
Trigger: CCCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCC...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATGCTTGGGCTTCACGGTaGCACGGATATTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDAWASR*HGYWPA
Trigger: AGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGC...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTACACAGGCCGGAGCCCTaGCACTGCGCTGTCCGCCAA +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVHRPEP*HCAVRQ
Trigger: TTGGCGGACAGCGCAGTGGCAGGGCTCCGGCCTGTG...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTTTGCCTCCAGCCTAGCTTCCTCTCCTCATCATGCAAATTGCCGTTGGCTTTAGGCCTGTTGTCCCAATaGCCACCAGCATCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LCLQPSFLSSSCKLPLALGLLSQ*PPASPF
Trigger: GAAAGGAGATGCTGGTGGGCATTGGGACAACAGGCC...TAAAGCCAACGGCAATTTGCATGATGAGGAGAGGAAGCTAGGCTGGAGGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGCTTCGGGATATAAGTaGTCTCCAGTGGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVASGYK*SPVGRG
Trigger: ACCTCTGCCCACTGGAGACCACTTATATCCCGAAGC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp GGTGGACTGCTTTATAAACTTGAGACATCAAAGCATACCTGTGAATCTGGAGCAGAGGCCCTCCCCACCTaGCTCACCAGGAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GGLLYKLETSKHTCESGAEALPT*LTRKPK
Trigger: CTTGGGCTTCCTGGTGAGCCAGGTGGGGAGGGCCTC...TGCTCCAGATTCACAGGTATGCTTTGATGTCTCAAGTTTATAAAGCAGTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGCCGCCTGTCCATGCTaGAGAGAGGCCCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVAACPC*REALPT
Trigger: GGTGGGGAGGGCCTCTCTCCAGCATGGACAGGCGGC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATACCAGGTTTGCTCCCTaGGCGTACCCAGGTGCTACA +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDTRFAP*AYPGAT
Trigger: TGTAGCACCTGGGTACGCTCAGGGAGCAAACCTGGT...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CCTCCCATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCTCCTTGGACGCCGGCTaGTCCAGAGCTTACGCACCC +
Preference number: 4 (lower is better)
Translates to: PPIVTYLIVCLTVSKFFASLDAG*SRAYAP
Trigger: GGGTGCGTAAGCTCTGGAGCAGCCGGCGTCCAAGGA...GGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTATCAGCCGCCTGTCCATaGTGGAGAGAGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVSAACP*WREALP
Trigger: GGGGAGGGCCTCTCTCCAGCATGGACAGGCGGCTGA...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATAGCATCAGCTTCCCTTaGCGCTTCCTGCGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDSISFP*RFLRLK
Trigger: CTTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCT...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GGAGATTATGTGAGGAATTCAATGAACTTGGTACCTCATGTGCTTGGTACAATATCCCTGGAGCTGGGCTaGAGGAAGTCTGGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GDYVRNSMNLVPHVLGTISLELG*RKSGPP
Trigger: CGGGGGCCCAGACTTCCTGCAGCCCAGCTCCAGGGA...TATTGTACCAAGCACATGAGGTACCAAGTTCATTGAATTCCTCACATAATCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATTTCGGATGTCATCTTTaGTCAGCCAGGAGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDFGCHL*SARRGR
Trigger: GCGCCCCCTCCTGGCTGAGCAAAGATGACATCCGAA...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGCCGGAGCCCTGCCACTaGGCTGTCCGCCAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLPEPCH*AVRQES
Trigger: CGACTCTTGGCGGACAGCGCAGTGGCAGGGCTCCGG...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp TTAAGTATCCTTTCAGCTTATAATCTCTTTGGGGTACATTTTAGCCTCTTGGGCCCGGAGCCCTGCCACTaGGCTGTCCGCCAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: LSILSAYNLFGVHFSLLGPEPCH*AVRQES
Trigger: CGACTCTTGGCGGACAGCGCAGTGGCAGGGCTCCGG...GCCCAAGAGGCTAAAATGTACCCCAAAGAGATTATAAGCTGAAAGGATACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGGTACTCGGCCATTCTaGCAGCATTTCTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVGTRPF*QHFCFS
Trigger: GCTGAAACAGAAATGCTGGCAGAATGGCCGAGTACC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTATAAGTGGTCTCCAGTaGGCAGAGGTGGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVISGLQ*AEVEGK
Trigger: CTTTCCTTCCACCTCTGCCCACTGGAGACCACTTAT...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCTGCCCCGGCTTGTCTaGACAGGTCATTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDLPRLV*TGHFSA
Trigger: GGCAGAGAAATGACCTGTCCAGACAAGCCGGGGCAG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGTGGACCCATTGCCCTaGGACTCTGGAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVVDPLP*DSGGAR
Trigger: CCTGGCCCCTCCAGAGTCCCAGGGCAATGGGTCCAC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGGGCTGCAGGAAGTCTaGGCCCCCGGCTCGCACTCC +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLGLQEV*APGSHS
Trigger: GGAGTGCGAGCCGGGGGCCCAGACTTCCTGCAGCCC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGCCGCTTCCTGCGGCTaGAGGGATGGTCCGACCAAA +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVAASCG*RDGPTK
Trigger: TTTGGTCGGACCATCCCTTCAGCCGCAGGAAGCGGC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGACGGCAGGGTCCTGTTaGGCCCCAGGATCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVTAGSC*APGSCL
Trigger: TAGACAGGATCCTGGGGCTCAACAGGACCCTGCCGT...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATATGCATCCCAAAGAATaGTGGGGCATGGGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDMHPKE*WGMGGH
Trigger: ATGGCCGCCCATGCCCCATCATTCTTTGGGATGCAT...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR TCA 90 bp ATAAAGAATGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTGCTGTCCAAATGGCTGCTGTCCAAATGTaGACCGTGGGTGGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: IKNAKRMERHAAAAAVQMAAVQM*TVGGEK
Trigger: TTTTTCTCCACCCACGGTTCACATTTGGACAGCAGC...CATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGACAGGTCATTTCTCTaGCGCATCCACATGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVDRSFL*RIHMLN
Trigger: GTTCAACATGTGGATGCGGCAGAGAAATGACCTGTC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTATCCTTGGACGCCGGCTaGTCCAGAGCTTACGCACCC +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVSLDAG*SRAYAP
Trigger: GGGTGCGTAAGCTCTGGAGCAGCCGGCGTCCAAGGA...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTACGGCGGTGTCGCGGCTaGGATGTGGCCCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLRRCRG*DVAPSQ
Trigger: CTGAGAAGGGGCCACATCGCAGCCGCGACACCGCCG...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATTACACCACATTGGGCTaGAGAGTGGACCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDYTTLG*RVDPLP
Trigger: GGGCAATGGGTCCACTCTGCAGCCCAATGTGGTGTA...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGGATATTGGCCGGCTTaGTGCGCTTGGAGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVGYWPA*CAWSVG
Trigger: CCCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GGTGGACTGCTTTATAAACTTGAGACATCAAAGCATACCTGTGAATCTGGAGCAGGATATTGGCCGGCTTaGTGCGCTTGGAGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: GGLLYKLETSKHTCESGAGYWPA*CAWSVG
Trigger: CCCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCC...TGCTCCAGATTCACAGGTATGCTTTGATGTCTCAAGTTTATAAAGCAGTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp GGTGGACTGCTTTATAAACTTGAGACATCAAAGCATACCTGTGAATCTGGAGCAGCTTGGGCTTCACGGTaGCACGGATATTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: GGLLYKLETSKHTCESGAAWASR*HGYWPA
Trigger: AGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGC...TGCTCCAGATTCACAGGTATGCTTTGATGTCTCAAGTTTATAAAGCAGTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCTGCATGCTTTTTCCTaGGCTTGGGCTTCACGGTGC +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDLHAFS*AWASRC
Trigger: GCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATGGCAGCCGATGCCACTaGATGCTTTTTCCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDGSRCH*MLFPAL
Trigger: AAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCC...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTACCGACCAAAGCCTCCTaGCCTGGGGCAGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLPTKAS*PGAADA
Trigger: GGCATCGGCTGCCCCAGGGCAGGAGGCTTTGGTCGG...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCTGAGCGTACCCAGGTaGTACAGCATCAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDLSVPR*YSISFP
Trigger: AGGGAAGCTGATGCTGTAGCACCTGGGTACGCTCAG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAAGAATGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTGCTGTCCAAATGAATCTTAACCAGGTTTaGTCCCTGAGCGTACCCAGG +
Preference number: 4 (lower is better)
Translates to: IKNAKRMERHAAAAAVQMNLNQV*SLSVPR
Trigger: CCTGGGTACGCTCAGGGAGCAAACCTGGTTAAGATT...CATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTACCGGAGCCCTGCCACTaGGCTGTCCGCCAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLPEPCH*AVRQES
Trigger: CGACTCTTGGCGGACAGCGCAGTGGCAGGGCTCCGG...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTACACAGGCCGGAGCCCTaGCACTGCGCTGTCCGCCAA +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLHRPEP*HCAVRQ
Trigger: TTGGCGGACAGCGCAGTGGCAGGGCTCCGGCCTGTG...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTATCTTGGATGAACTCTaGTTTCCTGCTCACAGACGG +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVILDEL*FPAHRR
Trigger: CCGTCTGTGAGCAGGAAAGCAGAGTTCATCCAAGAT...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR CCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGTTTCTCCGGGTCCTTaGACGCCGGCTGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVVSPGP*TPAAPE
Trigger: CTCTGGAGCAGCCGGCGTCCAAGGACCCGGAGAAAC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGGAGGCCCTCCCCACCTaGCTCACCAGGAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLEALPT*LTRKPK
Trigger: CTTGGGCTTCCTGGTGAGCCAGGTGGGGAGGGCCTC...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGTCGCGGCTGCGATGTaGCCCCTTCTCAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLVAAAM*PLLSRL
Trigger: CAGGCGGCTGAGAAGGGGCCACATCGCAGCCGCGAC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGTATCTCAGGGAAGGATaGCTCGGCGGTGTCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVYLREG*LGGVAA
Trigger: AGCCGCGACACCGCCGAGCCATCCTTCCCTGAGATA...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp AGTTATGTTCTGAAGTTTGCTGGGTCTATAGTCAAAACCCAGCTTAGCCACCTATATCTCAGGGAAGGATaGCTCGGCGGTGTCGCGGCT +
Preference number: 4 (lower is better)
Translates to: SYVLKFAGSIVKTQLSHLYLREG*LGGVAA
Trigger: AGCCGCGACACCGCCGAGCCATCCTTCCCTGAGATA...TAGGTGGCTAAGCTGGGTTTTGACTATAGACCCAGCAAACTTCAGAACATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CCTCCCATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCATTGCCCTGGGACTCTaGAGGGGCCAGGGTACCATC +
Preference number: 4 (lower is better)
Translates to: PPIVTYLIVCLTVSKFFAIALGL*RGQGTI
Trigger: GATGGTACCCTGGCCCCTCCAGAGTCCCAGGGCAAT...GGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTACGGTGCCACGGATATTaGCCGGCTTGCTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVRCHGY*PACCAW
Trigger: CCAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCG...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp TGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTGCTGTCCAAATGTGAACCGTGATTTAATAAGCCACTaGGAAGTGAAGCGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: CQAHGKTRCCCCCPNVNRDLISH*EVKRGK
Trigger: TTTCCCTCGCTTCACTTCCCAGTGGCTTATTAAATC...ACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp GGGTCTCAGCCACTCCCAGGGATTTTAATCCATTCCATTCTAGGCTCCCTGGGAGGCAACTGCAGTAACTaGCTACATGTGTTAGAACCT +
Preference number: 4 (lower is better)
Translates to: GSQPLPGILIHSILGSLGGNCSN*LHVLEP
Trigger: AGGTTCTAACACATGTAGCCAGTTACTGCAGTTGCC...TCCCAGGGAGCCTAGAATGGAATGGATTAAAATCCCTGGGAGTGGCTGAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGACCAGGTTTGCTCCCTaGGCGTACCCAGGTGCTACA +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVTRFAP*AYPGAT
Trigger: TGTAGCACCTGGGTACGCTCAGGGAGCAAACCTGGT...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp GGTGGACTGCTTTATAAACTTGAGACATCAAAGCATACCTGTGAATCTGGAGCAACCAGGTTTGCTCCCTaGGCGTACCCAGGTGCTACA +
Preference number: 4 (lower is better)
Translates to: GGLLYKLETSKHTCESGATRFAP*AYPGAT
Trigger: TGTAGCACCTGGGTACGCTCAGGGAGCAAACCTGGT...TGCTCCAGATTCACAGGTATGCTTTGATGTCTCAAGTTTATAAAGCAGTCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTCTTCCTTGCGAGGTCTaGATCCACAGCAATTTGTAT +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVLPCEV*IHSNLY
Trigger: ATACAAATTGCTGTGGATTCAGACCTCGCAAGGAAG...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATAACCAGTTTATGAGCTaGCCCGGCTTGTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDNQFMS*PGLSGQ
Trigger: CTGTCCAGACAAGCCGGGGCAGCTCATAAACTGGTT...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTATGGGCTTACTCTTGCATGTCCAATACAGCATTTCCCTGGAACTCTCATATCAGATGGCACACGCAGTaGCCAGCAGAAGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VWAYSCMSNTAFPWNSHIRWHTQ*PAEGFS
Trigger: GGAGAAACCTTCTGCTGGGCACTGCGTGTGCCATCT...GATATGAGAGTTCCAGGGAAATGCTGTATTGGACATGCAAGAGTAAGCCCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGGCAGAGTGGACCCATTaGCCTGGGACTCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLAEWTH*PGTLEG
Trigger: CCCCTCCAGAGTCCCAGGGCAATGGGTCCACTCTGC...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGCCGATGCCACTGCATaGTTTTTCCTGCGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVADATA*FFLRLG
Trigger: GCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CCTCCCATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCGCCGATGCCACTGCATaGTTTTTCCTGCGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PPIVTYLIVCLTVSKFFAADATA*FFLRLG
Trigger: GCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGC...GGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGCCCTGGGGCAGCCGATaGCACTGCATGCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVPWGSR*HCMLFP
Trigger: AGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGG...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GGTGGACTGCTTTATAAACTTGAGACATCAAAGCATACCTGTGAATCTGGAGCACCCTGGGGCAGCCGATaGCACTGCATGCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GGLLYKLETSKHTCESGAPWGSR*HCMLFP
Trigger: AGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGG...TGCTCCAGATTCACAGGTATGCTTTGATGTCTCAAGTTTATAAAGCAGTCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp GGTGGACTGCTTTATAAACTTGAGACATCAAAGCATACCTGTGAATCTGGAGCAAGCATCAGCTTCCCTTaGCGCTTCCTGCGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GGLLYKLETSKHTCESGASISFP*RFLRLK
Trigger: CTTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCT...TGCTCCAGATTCACAGGTATGCTTTGATGTCTCAAGTTTATAAAGCAGTCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCTCCCTGGAGCTGGGCTaGAGGAAGTCTGGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGSLELG*RKSGPP
Trigger: CGGGGGCCCAGACTTCCTGCAGCCCAGCTCCAGGGA...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGCTCATGTCCAAGGGCTaGTTGAGAAGCCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVLMSKG*LRSPQG
Trigger: CCCCTGTGGGCTTCTCAAGCAGCCCTTGGACATGAG...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATGGAAAGACACGCTGCTaGTGCTGCTGTCCAAATGTG +
Preference number: 4 (lower is better)
Translates to: PPASPFTPHGSSLDNKLHGKTRC*CCCPNV
Trigger: CACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCC...ATGTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp TGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTGCTGTCCAAATGTGAACCGTACATGTGTTAGAACCTaGCAAAATGTTTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: CQAHGKTRCCCCCPNVNRTCVRT*QNVCHP
Trigger: TGGGTGACAAACATTTTGGCAGGTTCTAACACATGT...ACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATTCCAGTGGGCAGAGGTaGAAGGAAAGGGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDSSGQR*KERVGD
Trigger: ATCACCAACCCTTTCCTTCCACCTCTGCCCACTGGA...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATGCTTCGGGATATAAGTaGTCTCCAGTGGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDASGYK*SPVGRG
Trigger: ACCTCTGCCCACTGGAGACCACTTATATCCCGAAGC...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGCTGCCCCGGCTTGTCTaGACAGGTCATTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVLPRLV*TGHFSA
Trigger: GGCAGAGAAATGACCTGTCCAGACAAGCCGGGGCAG...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp GGAGATTATGTGAGGAATTCAATGAACTTGGTACCTCATGTGCTTGGTACAATAGTTTCTCCGGGTCCTTaGACGCCGGCTGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GDYVRNSMNLVPHVLGTIVSPGP*TPAAPE
Trigger: CTCTGGAGCAGCCGGCGTCCAAGGACCCGGAGAAAC...TATTGTACCAAGCACATGAGGTACCAAGTTCATTGAATTCCTCACATAATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGAGGCCCTCCCCACCTaGCTCACCAGGAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLEALPT*LTRKPK
Trigger: CTTGGGCTTCCTGGTGAGCCAGGTGGGGAGGGCCTC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCGTCGCGGCTGCGATGTaGCCCCTTCTCAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGVAAAM*PLLSRL
Trigger: CAGGCGGCTGAGAAGGGGCCACATCGCAGCCGCGAC...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGCATTGGGCTGCAGAGTaGACCCATTGCCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVHWAAE*THCPGT
Trigger: AGTCCCAGGGCAATGGGTCCACTCTGCAGCCCAATG...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGCTTTTTCCTGCGCTTaGGCTTCACGGTGCCACGGA +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVAFSCA*ASRCHG
Trigger: TCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATGCTGCTGCTGCTGCTTaGATGAACTCTGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDAAAAA*MNSAFL
Trigger: CAGGAAAGCAGAGTTCATCCAAGCAGCAGCAGCAGC...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393807.9
CDS-3UTR CCA 90 bp GGGTCTCAGCCACTCCCAGGGATTTTAATCCATTCCATTCTAGGCTCCCTGGGAGAAGGTTTCTTACATTaGCATAACTGTGGTGGACTG +
Preference number: 4 (lower is better)
Translates to: GSQPLPGILIHSILGSLGEGFLH*HNCGGL
Trigger: CAGTCCACCACAGTTATGCCAATGTAAGAAACCTTC...TCCCAGGGAGCCTAGAATGGAATGGATTAAAATCCCTGGGAGTGGCTGAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp GGGCTTGATAAAACCACACAGCTAGTTAGTATACATACTGAACAAATCACCAATGCCGCTTCCTGCGGCTaGAGGGATGGTCCGACCAAA +
Preference number: 4 (lower is better)
Translates to: GLDKTTQLVSIHTEQITNAASCG*RDGPTK
Trigger: TTTGGTCGGACCATCCCTTCAGCCGCAGGAAGCGGC...ATTGGTGATTTGTTCAGTATGTATACTAACTAGCTGTGTGGTTTTATCAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAACCAGGTTTGCTCCCTaGGCGTACCCAGGTGCTACA +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVTRFAP*AYPGAT
Trigger: TGTAGCACCTGGGTACGCTCAGGGAGCAAACCTGGT...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTCCTTGTCTACCTCCTTaGCTTTCCCAATACACTTTA +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVPCLPP*LSQYTL
Trigger: TAAAGTGTATTGGGAAAGTCAAGGAGGTAGACAAGG...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp CTAACATGGTCTGGCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGAATCTGTTACCTTGGATaGACTCTGCTTTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LTWSGSARLKKIPSAQERICYLG*TLLSCS
Trigger: TGAGCAGGAAAGCAGAGTTCATCCAAGGTAACAGAT...TCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGCCAGACCATGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGTTTCCTGACTTCAGCTaGCGCGTCCGCTTCGGGATA +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVFPDFS*RVRFGI
Trigger: TATCCCGAAGCGGACGCGGCAGCTGAAGTCAGGAAA...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTATCCTTGGACGCCGGCTaGTCCAGAGCTTACGCACCC +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLSLDAG*SRAYAP
Trigger: GGGTGCGTAAGCTCTGGAGCAGCCGGCGTCCAAGGA...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCTCAGCCGCCTGTCCATaGTGGAGAGAGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGSAACP*WREALP
Trigger: GGGGAGGGCCTCTCTCCAGCATGGACAGGCGGCTGA...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGTACACCACATTGGGCTaGAGAGTGGACCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVYTTLG*RVDPLP
Trigger: GGGCAATGGGTCCACTCTGCAGCCCAATGTGGTGTA...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGGGATATTGGCCGGCTTaGTGCGCTTGGAGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLGYWPA*CAWSVG
Trigger: CCCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCC...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGCCGATGCCACTGCATaGTTTTTCCTGCGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVADATA*FFLRLG
Trigger: GCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGGCAGCCGATGCCACTaGATGCTTTTTCCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVGSRCH*MLFPAL
Trigger: AAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGCTGAGCGTACCCAGGTaGTACAGCATCAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVLSVPR*YSISFP
Trigger: AGGGAAGCTGATGCTGTAGCACCTGGGTACGCTCAG...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CCTCCCATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCCTGAGCGTACCCAGGTaGTACAGCATCAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PPIVTYLIVCLTVSKFFALSVPR*YSISFP
Trigger: AGGGAAGCTGATGCTGTAGCACCTGGGTACGCTCAG...GGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATAATCTTAACCAGGTTTaGTCCCTGAGCGTACCCAGG +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDNLNQV*SLSVPR
Trigger: CCTGGGTACGCTCAGGGAGCAAACCTGGTTAAGATT...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTACTCATGTCCAAGGGCTaGTTGAGAAGCCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVLMSKG*LRSPQG
Trigger: CCCCTGTGGGCTTCTCAAGCAGCCCTTGGACATGAG...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATGGTACTCGGCCATTCTaGCAGCATTTCTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDGTRPF*QHFCFS
Trigger: GCTGAAACAGAAATGCTGGCAGAATGGCCGAGTACC...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCATGGAAAGACACGCTaGTGCTGCTGCTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDHGKTR*CCCLDE
Trigger: TTCATCCAAGCAGCAGCAGCAGCGTGTCTTTCCATG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393807.9
CDS-3UTR GCA 90 bp CCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATACCTTGGATGAACTCTaGTTTCCTGCTCACAGACGG +
Preference number: 4 (lower is better)
Translates to: PPASPFTPHGSSLDNKLHTLDEL*FPAHRR
Trigger: CCGTCTGTGAGCAGGAAAGCAGAGTTCATCCAAGGT...ATGTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATTGTCAGCAAGTTCTTTaGCTCCAGCCTAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PPASPFTPHGSSLDNKLHCQQVL*LQPSFL
Trigger: GAGGAAGCTAGGCTGGAGGCAAAGAACTTGCTGACA...ATGTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGGAAGCCCAAGTAGATaGCACACGCAGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVGSPSR*HTQCPA
Trigger: TGCTGGGCACTGCGTGTGCCATCTACTTGGGCTTCC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGCTGCGGCTGAAGGGATaGTCCGACCAAAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLLRLKG*SDQSLL
Trigger: CAGGAGGCTTTGGTCGGACCATCCCTTCAGCCGCAG...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTAGAAACTGCAGAAGCTaGAAACTCTTTGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVRNCRS*KLFDAF
Trigger: GAAGGCATCAAAGAGTTTCCAGCTTCTGCAGTTTCT...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTCATATCCTCCCAGGCTaGGAAAATAAAGAATGCCAA +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVHILPG*ENKECQ
Trigger: TTGGCATTCTTTATTTTCCCAGCCTGGGAGGATATG...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393807.9
CDS-3UTR CCA 90 bp TGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTGCTGTCCAAATGTGAACCGTAAAGATTATACAGTATaGGCTTACTCTTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: CQAHGKTRCCCCCPNVNRKDYTV*AYSCMS
Trigger: GGACATGCAAGAGTAAGCCCATACTGTATAATCTTT...ACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCGCCGCTTCCTGCGGCTaGAGGGATGGTCCGACCAAA +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGAASCG*RDGPTK
Trigger: TTTGGTCGGACCATCCCTTCAGCCGCAGGAAGCGGC...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTAGTCATGAGGAAAATTaGTCAGACGCAGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVSHEEN*SDAGFN
Trigger: GTTAAAACCTGCGTCTGATCAATTTTCCTCATGACT...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTCTTTCACACAGATATTaGGTTAACCTTGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVLSHRY*VNLDQN
Trigger: GTTCTGGTCAAGGTTAACTCAATATCTGTGTGAAAG...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAAGATGGCACACGCAGTaGCCAGCAGAAGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVRWHTQ*PAEGFS
Trigger: GGAGAAACCTTCTGCTGGGCACTGCGTGTGCCATCT...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCGCAGAGTGGACCCATTaGCCTGGGACTCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGAEWTH*PGTLEG
Trigger: CCCCTCCAGAGTCCCAGGGCAATGGGTCCACTCTGC...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGCTTGGGCTTCACGGTaGCACGGATATTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLAWASR*HGYWPA
Trigger: AGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGGCCGATGCCACTGCATaGTTTTTCCTGCGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLADATA*FFLRLG
Trigger: GCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGC...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGAGCATCAGCTTCCCTTaGCGCTTCCTGCGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLSISFP*RFLRLK
Trigger: CTTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCT...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTTACTTTGACCCCGTGTaGATTGATATAGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVYFDPV*IDIGDK
Trigger: CTTATCACCTATATCAATGCACACGGGGTCAAAGTA...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp AACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCTCCAGCCTAGCTCCTGTGCTCTACTCTaGTCAGAACAGTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: NLFNSMPDCQQVLCLQPSSCALL*SEQSVW
Trigger: CCACACTGACTGTTCTGAGCAGAGTAGAGCACAGGA...GCTAGGCTGGAGGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGCGGCTTGTTTACAGCTaGCCCCATGCTTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLRLVYS*PHAWLQ
Trigger: CTGGAGCCAAGCATGGGGCCAGCTGTAAACAAGCCG...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296530.12
CDS-3UTR CCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGCTTCGGGATATAAGTaGTCTCCAGTGGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVASGYK*SPVGRG
Trigger: ACCTCTGCCCACTGGAGACCACTTATATCCCGAAGC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp TTACATATTCACCTAAGTCCAGTGGCTAAGAAGTTATGTTCTGAAGTTTGCTGGCTGCCCCGGCTTGTCTaGACAGGTCATTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LHIHLSPVAKKLCSEVCWLPRLV*TGHFSA
Trigger: GGCAGAGAAATGACCTGTCCAGACAAGCCGGGGCAG...CCAGCAAACTTCAGAACATAACTTCTTAGCCACTGGACTTAGGTGAATATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCGTTTCTCCGGGTCCTTaGACGCCGGCTGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGVSPGP*TPAAPE
Trigger: CTCTGGAGCAGCCGGCGTCCAAGGACCCGGAGAAAC...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAATTGCCCTGGGACTCTaGAGGGGCCAGGGTACCATC +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLIALGL*RGQGTI
Trigger: GATGGTACCCTGGCCCCTCCAGAGTCCCAGGGCAAT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGCATTGGGCTGCAGAGTaGACCCATTGCCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLHWAAE*THCPGT
Trigger: AGTCCCAGGGCAATGGGTCCACTCTGCAGCCCAATG...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGGCTTTTTCCTGCGCTTaGGCTTCACGGTGCCACGGA +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLAFSCA*ASRCHG
Trigger: TCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGC...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTACTGCGGCTGAAGGGATaGTCCGACCAAAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLLRLKG*SDQSLL
Trigger: CAGGAGGCTTTGGTCGGACCATCCCTTCAGCCGCAG...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGCATGGGCGGCCATCTTaGATGAACTCTGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVHGRPS*MNSAFL
Trigger: CAGGAAAGCAGAGTTCATCCAAGATGGCCGCCCATG...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR CCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAAACCCGATTCAGGCTTaGGTACTCGGCCATTCTGCC +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVNPIQA*VLGHSA
Trigger: GGCAGAATGGCCGAGTACCCAAGCCTGAATCGGGTT...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTTTGCCTCCAGCCTAGCTTCCTCTCCTCATCATGCAAATTGCCGTTGGCTTTAGTGAAGCGAGGGAAATaGAGAGCAAAGATTATACAG +
Preference number: 4 (lower is better)
Translates to: LCLQPSFLSSSCKLPLALVKRGK*RAKIIQ
Trigger: CTGTATAATCTTTGCTCTCCATTTCCCTCGCTTCAC...TAAAGCCAACGGCAATTTGCATGATGAGGAGAGGAAGCTAGGCTGGAGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CTAACATGGTCTGGCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGACCTCTTGGGCCAATCTaGATTCAAAGTTGTAACTTC +
Preference number: 4 (lower is better)
Translates to: LTWSGSARLKKIPSAQERPLGPI*IQSCNF
Trigger: GAAGTTACAACTTTGAATCCAGATTGGCCCAAGAGG...TCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGCCAGACCATGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CCTCCCATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCCATTGGAAATGCAGTTaGGTCTCAGCCACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PPIVTYLIVCLTVSKFFAHWKCS*VSATPR
Trigger: CCTGGGAGTGGCTGAGACCCAACTGCATTTCCAATG...GGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCACGGCAGGGTCCTGTTaGGCCCCAGGATCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGTAGSC*APGSCL
Trigger: TAGACAGGATCCTGGGGCTCAACAGGACCCTGCCGT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGATGCATCCCAAAGAATaGTGGGGCATGGGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLMHPKE*WGMGGH
Trigger: ATGGCCGCCCATGCCCCATCATTCTTTGGGATGCAT...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR TCA 90 bp CCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATCCCTGGGAACCTCACTaGAATGCTAAATTTCATGGT +
Preference number: 4 (lower is better)
Translates to: PPASPFTPHGSSLDNKLHPWEPH*NAKFHG
Trigger: ACCATGAAATTTAGCATTTCAGTGAGGTTCCCAGGG...ATGTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTAACTTGGAAACTGACTaGTGCATGGTTTTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVNLETD*CMVLRD
Trigger: ATCTCTTAAAACCATGCAGCAGTCAGTTTCCAAGTT...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296530.12
CDS-3UTR GCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGTTTCCTGACTTCAGCTaGCGCGTCCGCTTCGGGATA +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLFPDFS*RVRFGI
Trigger: TATCCCGAAGCGGACGCGGCAGCTGAAGTCAGGAAA...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAAACCAGTTTATGAGCTaGCCCGGCTTGTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVNQFMS*PGLSGQ
Trigger: CTGTCCAGACAAGCCGGGGCAGCTCATAAACTGGTT...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp TTACATATTCACCTAAGTCCAGTGGCTAAGAAGTTATGTTCTGAAGTTTGCTGGTACACCACATTGGGCTaGAGAGTGGACCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: LHIHLSPVAKKLCSEVCWYTTLG*RVDPLP
Trigger: GGGCAATGGGTCCACTCTGCAGCCCAATGTGGTGTA...CCAGCAAACTTCAGAACATAACTTCTTAGCCACTGGACTTAGGTGAATATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp GGAGATTATGTGAGGAATTCAATGAACTTGGTACCTCATGTGCTTGGTACAATAGGCAGCCGATGCCACTaGATGCTTTTTCCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: GDYVRNSMNLVPHVLGTIGSRCH*MLFPAL
Trigger: AAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCC...TATTGTACCAAGCACATGAGGTACCAAGTTCATTGAATTCCTCACATAATCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGAATCTTAACCAGGTTTaGTCCCTGAGCGTACCCAGG +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVNLNQV*SLSVPR
Trigger: CCTGGGTACGCTCAGGGAGCAAACCTGGTTAAGATT...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCGTATTCATCTACACTaGCTCATTGCTAAACGGGCT +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDRIHLH*LIAKRA
Trigger: AGCCCGTTTAGCAATGAGGCAGTGTAGATGAATACG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGTGCTTGGATGAACTCTaGTTTCCTGCTCACAGACGG +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVCLDEL*FPAHRR
Trigger: CCGTCTGTGAGCAGGAAAGCAGAGTTCATCCAAGCA...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393807.9
CDS-3UTR GCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTAATGCTCTAAATGTGTaGTTGTTCTGTGCTGACATA +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVNALNV*LFCADI
Trigger: TATGTCAGCACAGAACAAGCACACATTTAGAGCATT...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585682.6
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGGAAGCCCAAGTAGATaGCACACGCAGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLGSPSR*HTQCPA
Trigger: TGCTGGGCACTGCGTGTGCCATCTACTTGGGCTTCC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCATTGCCCTGGGACTCTaGAGGGGCCAGGGTACCATC +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGIALGL*RGQGTI
Trigger: GATGGTACCCTGGCCCCTCCAGAGTCCCAGGGCAAT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGAAGAATGATGGGGCATaGGCGGCCATCTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVKNDGA*AAILDE
Trigger: TTCATCCAAGATGGCCGCCCATGCCCCATCATTCTT...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR CCA 90 bp GCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGATAACCCGCTTCCCTTTGTATTCGAGCCCTaGAATAGCTTTAATATTCAG +
Preference number: 4 (lower is better)
Translates to: ALRGLRRFHLLKNDNPLPFVFEP*NSFNIQ
Trigger: CTGAATATTAAAGCTATTCCAGGGCTCGAATACAAA...GGGAAGCGGGTTATCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CTAACATGGTCTGGCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGAAGGCATAAAGAGACATaGCAACATTTCCAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: LTWSGSARLKKIPSAQERRHKET*QHFQVV
Trigger: TACGACTTGGAAATGTTGCCATGTCTCTTTATGCCT...TCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGCCAGACCATGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGCCGCATCCACATGTTaGACGGAGTTTAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVAASTC*TEFKVC
Trigger: GCAGACTTTAAACTCCGTTCAACATGTGGATGCGGC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATAAATCCCAGAGACAGTaGGTAAAAGTGGAGACTCAA +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDKSQRQ*VKVETQ
Trigger: TTGAGTCTCCACTTTTACTCACTGTCTCTGGGATTT...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp CTAACATGGTCTGGCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGATCAAACATAAGCCACTaGCTCACTGTACTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LTWSGSARLKKIPSAQERSNISH*LTVLCI
Trigger: AATACAAAGTACAGTGAGTCAGTGGCTTATGTTTGA...TCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGCCAGACCATGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp GCCCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACCATTTCCAAGTCGTATaGTTGGTAAGTTCAAACCTA +
Preference number: 4 (lower is better)
Translates to: AHQHLLSRHTVPVWIISYHFQVV*LVSSNL
Trigger: TAGGTTTGAACTTACCAATCATACGACTTGGAAATG...GTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp GGAGATTATGTGAGGAATTCAATGAACTTGGTACCTCATGTGCTTGGTACAATAAACCAGTTTATGAGCTaGCCCGGCTTGTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: GDYVRNSMNLVPHVLGTINQFMS*PGLSGQ
Trigger: CTGTCCAGACAAGCCGGGGCAGCTCATAAACTGGTT...TATTGTACCAAGCACATGAGGTACCAAGTTCATTGAATTCCTCACATAATCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGGCAGCCGATGCCACTaGATGCTTTTTCCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLGSRCH*MLFPAL
Trigger: AAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCAGCATCAGCTTCCCTTaGCGCTTCCTGCGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGSISFP*RFLRLK
Trigger: CTTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAAATCTTAACCAGGTTTaGTCCCTGAGCGTACCCAGG +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVNLNQV*SLSVPR
Trigger: CCTGGGTACGCTCAGGGAGCAAACCTGGTTAAGATT...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCCTCATGTCCAAGGGCTaGTTGAGAAGCCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGLMSKG*LRSPQG
Trigger: CCCCTGTGGGCTTCTCAAGCAGCCCTTGGACATGAG...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATAGTTTCTGCCGTAAGTaGTGGCTCTTCAAAACAGAA +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDSFCRK*WLFKTE
Trigger: TTCTGTTTTGAAGAGCCAGCACTTACGGCAGAAACT...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTAACATGGTCTGGCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGAACCTATTTAATAGTATaGCTGACTGTCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LTWSGSARLKKIPSAQERTYLIV*LTVSKF
Trigger: GAACTTGCTGACAGTCAGGCATACTATTAAATAGGT...TCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGCCAGACCATGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCCTGCCCCGGCTTGTCTaGACAGGTCATTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGLPRLV*TGHFSA
Trigger: GGCAGAGAAATGACCTGTCCAGACAAGCCGGGGCAG...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGCATGGGCGGCCATCTTaGATGAACTCTGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLHGRPS*MNSAFL
Trigger: CAGGAAAGCAGAGTTCATCCAAGATGGCCGCCCATG...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR CCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGGGTCATGCTTTCGCTaGATAATGTGTGCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVGSCFR*IMCARA
Trigger: GGCTCTAGCACACATTATCCAGCGAAAGCATGACCC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTCCACTAGATACAAATTaGACCAAAATAGAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVPLDTN*TKIERV
Trigger: TACTCTCTCTATTTTGGTCCAATTTGTATCTAGTGG...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATTCCCTTGAAAACTACTaGTTGCAAAGCAAAACTTGG +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDSLENY*LQSKTW
Trigger: CCAAGTTTTGCTTTGCAATCAGTAGTTTTCAAGGGA...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296530.12
CDS-3UTR TCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGGCCGCATCCACATGTTaGACGGAGTTTAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLAASTC*TEFKVC
Trigger: GCAGACTTTAAACTCCGTTCAACATGTGGATGCGGC...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp GGAGATTATGTGAGGAATTCAATGAACTTGGTACCTCATGTGCTTGGTACAATAGCCGCATCCACATGTTaGACGGAGTTTAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GDYVRNSMNLVPHVLGTIAASTC*TEFKVC
Trigger: GCAGACTTTAAACTCCGTTCAACATGTGGATGCGGC...TATTGTACCAAGCACATGAGGTACCAAGTTCATTGAATTCCTCACATAATCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCTTTCACACAGATATTaGGTTAACCTTGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDLSHRY*VNLDQN
Trigger: GTTCTGGTCAAGGTTAACTCAATATCTGTGTGAAAG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAAACCAGTTTATGAGCTaGCCCGGCTTGTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLNQFMS*PGLSGQ
Trigger: CTGTCCAGACAAGCCGGGGCAGCTCATAAACTGGTT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCAGATGGCACACGCAGTaGCCAGCAGAAGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGRWHTQ*PAEGFS
Trigger: GGAGAAACCTTCTGCTGGGCACTGCGTGTGCCATCT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCTACACCACATTGGGCTaGAGAGTGGACCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGYTTLG*RVDPLP
Trigger: GGGCAATGGGTCCACTCTGCAGCCCAATGTGGTGTA...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATTCTATAAAAACCAAATaGCTTGGGTCATGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDSIKTK*LGSCFR
Trigger: GCGAAAGCATGACCCAAGGCATTTGGTTTTTATAGA...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp TTAAGTATCCTTTCAGCTTATAATCTCTTTGGGGTACATTTTAGCCTCTTGGGCAAGACACGCTGCTGCTaGTGCTGTCCAAATGTGAAC +
Preference number: 4 (lower is better)
Translates to: LSILSAYNLFGVHFSLLGKTRCC*CCPNVN
Trigger: GTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTT...GCCCAAGAGGCTAAAATGTACCCCAAAGAGATTATAAGCTGAAAGGATACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp GCCCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATAACTGTGGTGGACTaGTTTATAAACTTGAGACAT +
Preference number: 4 (lower is better)
Translates to: AHQHLLSRHTVPVWIISYITVVD*FINLRH
Trigger: ATGTCTCAAGTTTATAAAGCAGTCCACCACAGTTAT...GTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGATAAGTGGTCTCCAGTaGGCAGAGGTGGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLISGLQ*AEVEGK
Trigger: CTTTCCTTCCACCTCTGCCCACTGGAGACCACTTAT...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGAAGAATGATGGGGCATaGGCGGCCATCTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLKNDGA*AAILDE
Trigger: TTCATCCAAGATGGCCGCCCATGCCCCATCATTCTT...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGGGGTCATGCTTTCGCTaGATAATGTGTGCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLGSCFR*IMCARA
Trigger: GGCTCTAGCACACATTATCCAGCGAAAGCATGACCC...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAAGAATGCCAAGCGCATaGAAAGACACGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLRMPSA*KDTLLL
Trigger: CAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393807.9
CDS-3UTR CCA 90 bp GTATGGGCTTACTCTTGCATGTCCAATACAGCATTTCCCTGGAACTCTCATATCAGAATATCCTTTATATaGCATGGGCATGACCGCAGA +
Preference number: 4 (lower is better)
Translates to: VWAYSCMSNTAFPWNSHIRISFI*HGHDRR
Trigger: TCTGCGGTCATGCCCATGCCATATAAAGGATATTCT...GATATGAGAGTTCCAGGGAAATGCTGTATTGGACATGCAAGAGTAAGCCCATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CTAACATGGTCTGGCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGACAAAGTTGTAACTTCTaGCATCATTCTGCATTCAAA +
Preference number: 4 (lower is better)
Translates to: LTWSGSARLKKIPSAQERQSCNF*HHSAFK
Trigger: TTTGAATGCAGAATGATGCCAGAAGTTACAACTTTG...TCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGCCAGACCATGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CTAACATGGTCTGGCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGAATCCTTAGCAAATTGTaGGCACCCAATAAAAATTCA +
Preference number: 4 (lower is better)
Translates to: LTWSGSARLKKIPSAQERILSKL*APNKNS
Trigger: TGAATTTTTATTGGGTGCCCACAATTTGCTAAGGAT...TCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGCCAGACCATGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp GCCCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACCACACGGTTCCAGTTTaGATAATAAGTTACATATTC +
Preference number: 4 (lower is better)
Translates to: AHQHLLSRHTVPVWIISYHTVPV*IISYIF
Trigger: GAATATGTAACTTATTATCCAAACTGGAACCGTGTG...GTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR CAA 72 bp CAGCCTAGCTTCCTCTCCTCATCATGCAAATTGCCGTaGGCTTTAATTAGATTTAATAAGCCACTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: QPSFLSSSCKLP*ALIRFNKPLGS
Trigger: ACTTCCCAGTGGCTTATTAAATCTAATTAAAGCCAACGGCAATTTGCATGATGAGGAGAGGAAGCTAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGCAAAACTTGGAAACTaGCTGCTGCATGGTTTTAAG +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVAKLGN*LLHGFK
Trigger: CTTAAAACCATGCAGCAGTCAGTTTCCAAGTTTTGC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296530.12
CDS-3UTR TCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTACTTCCTTGCGAGGTCTaGATCCACAGCAATTTGTAT +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVLPCEV*IHSNLY
Trigger: ATACAAATTGCTGTGGATTCAGACCTCGCAAGGAAG...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGAAATCCCAGAGACAGTaGGTAAAAGTGGAGACTCAA +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVKSQRQ*VKVETQ
Trigger: TTGAGTCTCCACTTTTACTCACTGTCTCTGGGATTT...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp TTAAGTATCCTTTCAGCTTATAATCTCTTTGGGGTACATTTTAGCCTCTTGGGCGACAGGTCATTTCTCTaGCGCATCCACATGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LSILSAYNLFGVHFSLLGDRSFL*RIHMLN
Trigger: GTTCAACATGTGGATGCGGCAGAGAAATGACCTGTC...GCCCAAGAGGCTAAAATGTACCCCAAAGAGATTATAAGCTGAAAGGATACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGAAATGCCTTGGGTCATaGTTTCGCTGGATAATGTGT +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVKCLGS*FRWIMC
Trigger: ACACATTATCCAGCGAAAGCATGACCCAAGGCATTT...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATGGAGTGCATTTGAAATaGACAGAGTATTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDGVHLK*TEYSHC
Trigger: ACAATGAGAATACTCTGTGCATTTCAAATGCACTCC...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCGGAAAGACACGCTGCTaGTGCTGCTTGGATGAACTC +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGGKTRC*CCLDEL
Trigger: GAGTTCATCCAAGCAGCAGCAGCAGCGTGTCTTTCC...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393807.9
CDS-3UTR GCA 90 bp GGAGATTATGTGAGGAATTCAATGAACTTGGTACCTCATGTGCTTGGTACAATACCTTTTGCTGGCAACTaGAGTAACTGGCTACATGTG +
Preference number: 4 (lower is better)
Translates to: GDYVRNSMNLVPHVLGTIPFAGN*SNWLHV
Trigger: CACATGTAGCCAGTTACTGCAGTTGCCAGCAAAAGG...TATTGTACCAAGCACATGAGGTACCAAGTTCATTGAATTCCTCACATAATCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAATAAGTGGTCTCCAGTaGGCAGAGGTGGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLISGLQ*AEVEGK
Trigger: CTTTCCTTCCACCTCTGCCCACTGGAGACCACTTAT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGGGTCATGCTTTCGCTaGATAATGTGTGCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLGSCFR*IMCARA
Trigger: GGCTCTAGCACACATTATCCAGCGAAAGCATGACCC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGTTCTGCCGTAAGTGCTaGCTCTTCAAAACAGAAACT +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVFCRKC*LFKTET
Trigger: AGTTTCTGTTTTGAAGAGCCAGCACTTACGGCAGAA...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp GTATGGGCTTACTCTTGCATGTCCAATACAGCATTTCCCTGGAACTCTCATATCTACATTTTAGCCTCTTaGGCCAATCTGGATTCAAAG +
Preference number: 4 (lower is better)
Translates to: VWAYSCMSNTAFPWNSHIYILAS*ANLDSK
Trigger: CTTTGAATCCAGATTGGCCCAAGAGGCTAAAATGTA...GATATGAGAGTTCCAGGGAAATGCTGTATTGGACATGCAAGAGTAAGCCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp CCTCCCATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCTCATCTTCTCCTCTCTaGGGCCTTTATGACATGAAA +
Preference number: 4 (lower is better)
Translates to: PPIVTYLIVCLTVSKFFASSSPL*GLYDMK
Trigger: TTTCATGTCATAAAGGCCCCAGAGAGGAGAAGATGA...GGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATGGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR CAA 72 bp AATGGAGAGCAAAGATTATACAGTATGGGCTTACTCTaGCATGTCCAATACAGCATTTCCCTGGAACTCTCA +
Preference number: 4 (lower is better)
Translates to: NGEQRLYSMGLL*HVQYSISLELS
Trigger: TGAGAGTTCCAGGGAAATGCTGTATTGGACATGCAAGAGTAAGCCCATACTGTATAATCTTTGCTCTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTACCTTGTCTACCTCCTTaGCTTTCCCAATACACTTTA +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVPCLPP*LSQYTL
Trigger: TAAAGTGTATTGGGAAAGTCAAGGAGGTAGACAAGG...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAAAATGCCTTGGGTCATaGTTTCGCTGGATAATGTGT +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVKCLGS*FRWIMC
Trigger: ACACATTATCCAGCGAAAGCATGACCCAAGGCATTT...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGGATGTCAGGCAACTTaGCAAAAGAGTTATTTCAAG +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVGCQAT*QKSYFK
Trigger: CTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CCTCCCATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCGTATGGGCTTACTCTTaGATGTCCAATACAGCATTT +
Preference number: 4 (lower is better)
Translates to: PPIVTYLIVCLTVSKFFAVWAYS*MSNTAF
Trigger: AAATGCTGTATTGGACATGCAAGAGTAAGCCCATAC...GGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATGGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCAGCTGGCCCCATGCTTaGCTCCAGGAAGAATGTAAT +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGSWPHA*LQEECN
Trigger: ATTACATTCTTCCTGGAGCCAAGCATGGGGCCAGCT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296530.12
CDS-3UTR CCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTACAAAGAGTGCCATCTTaGACCACTCATGATGATGTA +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVQRVPS*TTHDDV
Trigger: TACATCATCATGAGTGGTCCAAGATGGCACTCTTTG...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAAAAAACCAAATGCCTTaGGTCATGCTTTCGCTGGAT +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVKNQMP*VMLSLD
Trigger: ATCCAGCGAAAGCATGACCCAAGGCATTTGGTTTTT...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGCCTTGTCTACCTCCTTaGCTTTCCCAATACACTTTA +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLPCLPP*LSQYTL
Trigger: TAAAGTGTATTGGGAAAGTCAAGGAGGTAGACAAGG...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTACTTTCACACAGATATTaGGTTAACCTTGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVLSHRY*VNLDQN
Trigger: GTTCTGGTCAAGGTTAACTCAATATCTGTGTGAAAG...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCGACAGGTCATTTCTCTaGCGCATCCACATGTTGAAC +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGDRSFL*RIHMLN
Trigger: GTTCAACATGTGGATGCGGCAGAGAAATGACCTGTC...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCATCTTGGATGAACTCTaGTTTCCTGCTCACAGACGG +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGILDEL*FPAHRR
Trigger: CCGTCTGTGAGCAGGAAAGCAGAGTTCATCCAAGAT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR GCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGAGTTTCTGCCGTAAGTaGTGGCTCTTCAAAACAGAA +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLSFCRK*WLFKTE
Trigger: TTCTGTTTTGAAGAGCCAGCACTTACGGCAGAAACT...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTATCCCCAGGTGAGTCTTaGATGTCCAATACAGCATTT +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLSPGES*MSNTAF
Trigger: AAATGCTGTATTGGACATGCAAGACTCACCTGGGGA...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393807.9
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGAAAAACCAAATGCCTTaGGTCATGCTTTCGCTGGAT +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLKNQMP*VMLSLD
Trigger: ATCCAGCGAAAGCATGACCCAAGGCATTTGGTTTTT...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGAGAAACTGCAGAAGCTaGAAACTCTTTGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLRNCRS*KLFDAF
Trigger: GAAGGCATCAAAGAGTTTCCAGCTTCTGCAGTTTCT...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGTTCCCATTAGTATTTaGTCAGAACAGTCAAAACGG +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVVPISI*SEQSKR
Trigger: CCGTTTTGACTGTTCTGACCAAATACTAATGGGAAC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGTTATTTCAAGTCAGTaGCTCAAAGTAGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVVISSQ*LKVGFQ
Trigger: CTGGAATCCTACTTTGAGCCACTGACTTGAAATAAC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp TTACATATTCACCTAAGTCCAGTGGCTAAGAAGTTATGTTCTGAAGTTTGCTGGCATATCCTCCCAGGCTaGGAAAATAAAGAATGCCAA +
Preference number: 4 (lower is better)
Translates to: LHIHLSPVAKKLCSEVCWHILPG*ENKECQ
Trigger: TTGGCATTCTTTATTTTCCCAGCCTGGGAGGATATG...CCAGCAAACTTCAGAACATAACTTCTTAGCCACTGGACTTAGGTGAATATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp AGTTATGTTCTGAAGTTTGCTGGGTCTATAGTCAAAACCCAGCTTAGCCACCTAGTAACACATGAGACTTaGAGATTATGTGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: SYVLKFAGSIVKTQLSHLVTHET*RLCEEF
Trigger: GAATTCCTCACATAATCTCCAAGTCTCATGTGTTAC...TAGGTGGCTAAGCTGGGTTTTGACTATAGACCCAGCAAACTTCAGAACATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR TCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGAGTCATGAGGAAAATTaGTCAGACGCAGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLSHEEN*SDAGFN
Trigger: GTTAAAACCTGCGTCTGATCAATTTTCCTCATGACT...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCACGGAGTTTAAAGTCTaGAGTTGGCTCCTGCTAATG +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGTEFKV*SWLLLM
Trigger: CATTAGCAGGAGCCAACTGCAGACTTTAAACTCCGT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAAAATGCCTTGGGTCATaGTTTCGCTGGATAATGTGT +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLKCLGS*FRWIMC
Trigger: ACACATTATCCAGCGAAAGCATGACCCAAGGCATTT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAAGTTTCTGCCGTAAGTaGTGGCTCTTCAAAACAGAA +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLSFCRK*WLFKTE
Trigger: TTCTGTTTTGAAGAGCCAGCACTTACGGCAGAAACT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGGAGTGCATTTGAAATaGACAGAGTATTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVGVHLK*TEYSHC
Trigger: ACAATGAGAATACTCTGTGCATTTCAAATGCACTCC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTATTGCAAAGCAAAACTTaGAAACTGACTGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLLQSKT*KLTAAW
Trigger: CCATGCAGCAGTCAGTTTCCAAGTTTTGCTTTGCAA...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296530.12
CDS-3UTR CCA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGTAGAACATATTTCATaGTCAAGAGTGTTCCACATT +
Preference number: 4 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVVEHIS*SRVFHI
Trigger: AATGTGGAACACTCTTGACCATGAAATATGTTCTAC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296530.12
CDS-3UTR CCA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAAGCTTAACAGAAGAATaGGTGTCATTACTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VVYFSNNRRNREKTGENVSLTEE*VSLLAE
Trigger: TTCAGCAAGTAATGACACCCATTCTTCTGTTAAGCT...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTACAAAGAGTGCCATCTTaGACCACTCATGATGATGTA +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLQRVPS*TTHDDV
Trigger: TACATCATCATGAGTGGTCCAAGATGGCACTCTTTG...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGGTTCCCATTAGTATTTaGTCAGAACAGTCAAAACGG +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLVPISI*SEQSKR
Trigger: CCGTTTTGACTGTTCTGACCAAATACTAATGGGAAC...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp GGGCTTGATAAAACCACACAGCTAGTTAGTATACATACTGAACAAATCACCAATAAGACGGGAGAATCTTaGAAGACAGACTCAATAGAT +
Preference number: 4 (lower is better)
Translates to: GLDKTTQLVSIHTEQITNKTGES*KTDSID
Trigger: ATCTATTGAGTCTGTCTTTCAAGATTCTCCCGTCTT...ATTGGTGATTTGTTCAGTATGTATACTAACTAGCTGTGTGGTTTTATCAAGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTATACTTTGACCCCGTGTaGATTGATATAGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLYFDPV*IDIGDK
Trigger: CTTATCACCTATATCAATGCACACGGGGTCAAAGTA...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGGATGTCAGGCAACTTaGCAAAAGAGTTATTTCAAG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLGCQAT*QKSYFK
Trigger: CTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGGGAGTGCATTTGAAATaGACAGAGTATTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLGVHLK*TEYSHC
Trigger: ACAATGAGAATACTCTGTGCATTTCAAATGCACTCC...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGAGCTTAACAGAAGAATaGGTGTCATTACTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLSLTEE*VSLLAE
Trigger: TTCAGCAAGTAATGACACCCATTCTTCTGTTAAGCT...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR CCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCAAAAACCAAATGCCTTaGGTCATGCTTTCGCTGGAT +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGKNQMP*VMLSLD
Trigger: ATCCAGCGAAAGCATGACCCAAGGCATTTGGTTTTT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCAGAAACTGCAGAAGCTaGAAACTCTTTGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGRNCRS*KLFDAF
Trigger: GAAGGCATCAAAGAGTTTCCAGCTTCTGCAGTTTCT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCTTCTGCCGTAAGTGCTaGCTCTTCAAAACAGAAACT +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGFCRKC*LFKTET
Trigger: AGTTTCTGTTTTGAAGAGCCAGCACTTACGGCAGAA...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGTTCCCATTAGTATTTaGTCAGAACAGTCAAAACGG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLVPISI*SEQSKR
Trigger: CCGTTTTGACTGTTCTGACCAAATACTAATGGGAAC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGTTATTTCAAGTCAGTaGCTCAAAGTAGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLVISSQ*LKVGFQ
Trigger: CTGGAATCCTACTTTGAGCCACTGACTTGAAATAAC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp GGAGATTATGTGAGGAATTCAATGAACTTGGTACCTCATGTGCTTGGTACAATATCCAAATGTGAACCGTaGGTGGAGAAAAATCATTTA +
Preference number: 4 (lower is better)
Translates to: GDYVRNSMNLVPHVLGTISKCEP*VEKNHL
Trigger: TAAATGATTTTTCTCCACCCACGGTTCACATTTGGA...TATTGTACCAAGCACATGAGGTACCAAGTTCATTGAATTCCTCACATAATCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592057.1
3UTR CAA 72 bp AGTCATTTATTTTACGTATTCATCTACACTGCCTCATaGCTAAACGGGCTTGAGGTTGATGTGCTTGATTTA +
Preference number: 4 (lower is better)
Translates to: SHLFYVFIYTAS*LNGLEVDVLDL
Trigger: TAAATCAAGCACATCAACCTCAAGCCCGTTTAGCAATGAGGCAGTGTAGATGAATACGTAAAATAAATGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCTCTATAAAAACCAAATaGCTTGGGTCATGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGSIKTK*LGSCFR
Trigger: GCGAAAGCATGACCCAAGGCATTTGGTTTTTATAGA...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR GCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCGGATGTCAGGCAACTTaGCAAAAGAGTTATTTCAAG +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGGCQAT*QKSYFK
Trigger: CTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCC...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR TCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCGTGCTTGTTCTGTGCTaGCATAAACATAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGVLVLC*HKHKNF
Trigger: GAAATTCTTATGTTTATGTCAGCACAGAACAAGCAC...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585682.6
CDS-3UTR GCA 90 bp GGGCTTGATAAAACCACACAGCTAGTTAGTATACATACTGAACAAATCACCAATTTATGTTCTGAAGTTTaGTGGGTCTATAGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: GLDKTTQLVSIHTEQITNLCSEV*WVYSQN
Trigger: GTTTTGACTATAGACCCAGCAAACTTCAGAACATAA...ATTGGTGATTTGTTCAGTATGTATACTAACTAGCTGTGTGGTTTTATCAAGCCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CCA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTACCACTAGATACAAATTaGACCAAAATAGAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLPLDTN*TKIERV
Trigger: TACTCTCTCTATTTTGGTCCAATTTGTATCTAGTGG...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR CAA 72 bp GAAACTCCATGTGAATATCTACCATATGTGATGATCTaGGATATTGGCAAAGGACATAAAGATGCAACACAT +
Preference number: 4 (lower is better)
Translates to: ETPCEYLPYVMI*DIGKGHKDATH
Trigger: ATGTGTTGCATCTTTATGTCCTTTGCCAATATCCAAGATCATCACATATGGTAGATATTCACATGGAGTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
3UTR CAA 72 bp TTAGTAGTTCTCTTTCACACAGATATTGAGTTAACCTaGACCAGAACAAAGAAAATGTGGTGTATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LVVLFHTDIELT*TRTKKMWCISA
Trigger: TGCTGAAATACACCACATTTTCTTTGTTCTGGTCAAGGTTAACTCAATATCTGTGTGAAAGAGAACTACTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CCA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCCCAATTCTCAATATCTaGGCAGTAACCATTAAATCA +
Preference number: 4 (lower is better)
Translates to: INMFLGLSFNKHFGITGGPILNI*AVTIKS
Trigger: TGATTTAATGGTTACTGCCCAGATATTGAGAATTGG...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS GCA 90 bp GCGGTGTCGCGGCTGCGATGTGGCCCCTTCTCAGCCGCCTGTCCATaGTGGAGAGAGGCCCTCCCCACCTGGCTCACCAGGAAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: AVSRLRCGPFSAACP*WREALPTWLTRKPK
Trigger: CTTGGGCTTCCTGGTGAGCCAGGTGGGGAGGGCCTCTCTCCAGCATGGACAGGCGGCTGAGAAGGGGCCACATCGCAGCCGCGACACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 90 bp GGGTATCTCAGGGAAGGATGGCTCGGCGGTGTCGCGGCTGCGATGTaGCCCCTTCTCAGCCGCCTGTCCATGCTGGAGAGAGGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: GYLREGWLGGVAAAM*PLLSRLSMLERGPP
Trigger: GGGAGGGCCTCTCTCCAGCATGGACAGGCGGCTGAGAAGGGGCCACATCGCAGCCGCGACACCGCCGAGCCATCCTTCCCTGAGATACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp CATCCAGGGGTATCTCAGGGAAGGATGGCTCGGCGGTGTCGCGGCTaGGATGTGGCCCCTTCTCAGCCGCCTGTCCATGCTGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: HPGVSQGRMARRCRG*DVAPSQPPVHAGER
Trigger: CCTCTCTCCAGCATGGACAGGCGGCTGAGAAGGGGCCACATCGCAGCCGCGACACCGCCGAGCCATCCTTCCCTGAGATACCCCTGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp TCCCCACCTGGCTCACCAGGAAGCCCAAGTAGATGGCACACGCAGTaGCCAGCAGAAGGTTTCTCCGGGTCCTTGGACGCCGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SPPGSPGSPSRWHTQ*PAEGFSGSLDAGCS
Trigger: GGAGCAGCCGGCGTCCAAGGACCCGGAGAAACCTTCTGCTGGGCACTGCGTGTGCCATCTACTTGGGCTTCCTGGTGAGCCAGGTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 90 bp CCTGCCCTGGGGCAGCCGATGCCACTGCATGCTTTTTCCTGCGCTTaGGCTTCACGGTGCCACGGATATTGGCCGGCTTGCTGCGCTTGG +
Preference number: 5 (lower is better)
Translates to: PALGQPMPLHAFSCA*ASRCHGYWPACCAW
Trigger: CCAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 90 bp TGCTACAGCATCAGCTTCCCTTGCCGCTTCCTGCGGCTGAAGGGATaGTCCGACCAAAGCCTCCTGCCCTGGGGCAGCCGATGCCACTGC +
Preference number: 5 (lower is better)
Translates to: CYSISFPCRFLRLKG*SDQSLLPWGSRCHC
Trigger: GCAGTGGCATCGGCTGCCCCAGGGCAGGAGGCTTTGGTCGGACCATCCCTTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCTGTAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS TCA 90 bp TACCCAGGTGCTACAGCATCAGCTTCCCTTGCCGCTTCCTGCGGCTaGAGGGATGGTCCGACCAAAGCCTCCTGCCCTGGGGCAGCCGAT +
Preference number: 5 (lower is better)
Translates to: YPGATASASLAASCG*RDGPTKASCPGAAD
Trigger: ATCGGCTGCCCCAGGGCAGGAGGCTTTGGTCGGACCATCCCTTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCTGTAGCACCTGGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp AAGCCTCCTGCCCTGGGGCAGCCGATGCCACTGCATGCTTTTTCCTaGGCTTGGGCTTCACGGTGCCACGGATATTGGCCGGCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: KPPALGQPMPLHAFS*AWASRCHGYWPACC
Trigger: GCAGCAAGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGGCAGGAGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp GGTCCGACCAAAGCCTCCTGCCCTGGGGCAGCCGATGCCACTGCATaGTTTTTCCTGCGCTTGGGCTTCACGGTGCCACGGATATTGGCC +
Preference number: 5 (lower is better)
Translates to: GPTKASCPGAADATA*FFLRLGFTVPRILA
Trigger: GGCCAATATCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGGCAGGAGGCTTTGGTCGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp CTGAAGGGATGGTCCGACCAAAGCCTCCTGCCCTGGGGCAGCCGATaGCACTGCATGCTTTTTCCTGCGCTTGGGCTTCACGGTGCCACG +
Preference number: 5 (lower is better)
Translates to: LKGWSDQSLLPWGSR*HCMLFPALGLHGAT
Trigger: CGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGGCAGGAGGCTTTGGTCGGACCATCCCTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 90 bp GGAGAGAGGCCCTCCCCACCTGGCTCACCAGGAAGCCCAAGTAGATaGCACACGCAGTGCCCAGCAGAAGGTTTCTCCGGGTCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: GERPSPPGSPGSPSR*HTQCPAEGFSGSLD
Trigger: GTCCAAGGACCCGGAGAAACCTTCTGCTGGGCACTGCGTGTGCCATCTACTTGGGCTTCCTGGTGAGCCAGGTGGGGAGGGCCTCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 90 bp CGCTTCCTGCGGCTGAAGGGATGGTCCGACCAAAGCCTCCTGCCCTaGGGCAGCCGATGCCACTGCATGCTTTTTCCTGCGCTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: RFLRLKGWSDQSLLP*GSRCHCMLFPALGL
Trigger: AAGCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGGCAGGAGGCTTTGGTCGGACCATCCCTTCAGCCGCAGGAAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp GGCTTGCTGCGCTTGGAGCGTAGGGTAATGTACACCACATTGGGCTaGAGAGTGGACCCATTGCCCTGGGACTCTGGAGGGGCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: GLLRLERRVMYTTLG*RVDPLPWDSGGARV
Trigger: TACCCTGGCCCCTCCAGAGTCCCAGGGCAATGGGTCCACTCTGCAGCCCAATGTGGTGTACATTACCCTACGCTCCAAGCGCAGCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp GGATGGTCCGACCAAAGCCTCCTGCCCTGGGGCAGCCGATGCCACTaGATGCTTTTTCCTGCGCTTGGGCTTCACGGTGCCACGGATATT +
Preference number: 5 (lower is better)
Translates to: GWSDQSLLPWGSRCH*MLFPALGLHGATDI
Trigger: AATATCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGGCAGGAGGCTTTGGTCGGACCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp GTTTGCTCCCTGAGCGTACCCAGGTGCTACAGCATCAGCTTCCCTTaGCGCTTCCTGCGGCTGAAGGGATGGTCCGACCAAAGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: VCSLSVPRCYSISFP*RFLRLKGWSDQSLL
Trigger: CAGGAGGCTTTGGTCGGACCATCCCTTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCTGTAGCACCTGGGTACGCTCAGGGAGCAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp CAAACGGGCTCCGCTCCTAGAGGACACAGGCCGGAGCCCTGCCACTaGGCTGTCCGCCAAGAGTCGCATTCTTCGGATGTCATCTTTGCT +
Preference number: 5 (lower is better)
Translates to: QTGSAPRGHRPEPCH*AVRQESHSSDVIFA
Trigger: AGCAAAGATGACATCCGAAGAATGCGACTCTTGGCGGACAGCGCAGTGGCAGGGCTCCGGCCTGTGTCCTCTAGGAGCGGAGCCCGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp CGCACCCGCGGGACGCACAGGGAGCAGATGAACCAGTTTATGAGCTaGCCCGGCTTGTCTGGACAGGTCATTTCTCTGCCGCATCCACAT +
Preference number: 5 (lower is better)
Translates to: RTRGTHREQMNQFMS*PGLSGQVISLPHPH
Trigger: ATGTGGATGCGGCAGAGAAATGACCTGTCCAGACAAGCCGGGGCAGCTCATAAACTGGTTCATCTGCTCCCTGTGCGTCCCGCGGGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp ATCCTGTCTAGGTGGAAGGCAAACACCTCACTCATGTCCAAGGGCTaGTTGAGAAGCCCACAGGGGCTAGGGCCACAGCGGAGCACAGCG +
Preference number: 5 (lower is better)
Translates to: ILSRWKANTSLMSKG*LRSPQGLGPQRSTA
Trigger: CGCTGTGCTCCGCTGTGGCCCTAGCCCCTGTGGGCTTCTCAAGCAGCCCTTGGACATGAGTGAGGTGTTTGCCTTCCACCTAGACAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 90 bp AGGGTAATGTACACCACATTGGGCTGCAGAGTGGACCCATTGCCCTaGGACTCTGGAGGGGCCAGGGTACCATCCAGGGGTATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: RVMYTTLGCRVDPLP*DSGGARVPSRGISG
Trigger: CCCTGAGATACCCCTGGATGGTACCCTGGCCCCTCCAGAGTCCCAGGGCAATGGGTCCACTCTGCAGCCCAATGTGGTGTACATTACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp ACCCCGCACCAACCTCCAGGGTCGCTCTCCAATCTTAACCAGGTTTaGTCCCTGAGCGTACCCAGGTGCTACAGCATCAGCTTCCCTTGC +
Preference number: 5 (lower is better)
Translates to: TPHQPPGSLSNLNQV*SLSVPRCYSISFPC
Trigger: GCAAGGGAAGCTGATGCTGTAGCACCTGGGTACGCTCAGGGAGCAAACCTGGTTAAGATTGGAGAGCGACCCTGGAGGTTGGTGCGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS TCA 90 bp ACCAACCTCCAGGGTCGCTCTCCAATCTTAACCAGGTTTGCTCCCTaGGCGTACCCAGGTGCTACAGCATCAGCTTCCCTTGCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: TNLQGRSPILTRFAP*AYPGATASASLAAS
Trigger: GGAAGCGGCAAGGGAAGCTGATGCTGTAGCACCTGGGTACGCTCAGGGAGCAAACCTGGTTAAGATTGGAGAGCGACCCTGGAGGTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 90 bp TCGCTCTCCAATCTTAACCAGGTTTGCTCCCTGAGCGTACCCAGGTaGTACAGCATCAGCTTCCCTTGCCGCTTCCTGCGGCTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: SLSNLNQVCSLSVPR*YSISFPCRFLRLKG
Trigger: TCCCTTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCTGTAGCACCTGGGTACGCTCAGGGAGCAAACCTGGTTAAGATTGGAGAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 90 bp CTCACAGACGGCAGGGTCCTGTTGAGCCCCAGGATCCTGTCTAGGTaGAAGGCAAACACCTCACTCATGTCCAAGGGCTGCTTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: LTDGRVLLSPRILSR*KANTSLMSKGCLRS
Trigger: GCTTCTCAAGCAGCCCTTGGACATGAGTGAGGTGTTTGCCTTCCACCTAGACAGGATCCTGGGGCTCAACAGGACCCTGCCGTCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGGTTTCTCCGGGTCCTaGGACGCCGGCTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVGFSGS*DAGCSR
Trigger: TCTGGAGCAGCCGGCGTCCAAGGACCCGGAGAAACC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GGGTCTCAGCCACTCCCAGGGATTTTAATCCATTCCATTCTAGGCTCCCTGGGAGCCGGCTTGCTGCGCTaGGAGCGTAGGGTAATGTAC +
Preference number: 5 (lower is better)
Translates to: GSQPLPGILIHSILGSLGAGLLR*ERRVMY
Trigger: GTACATTACCCTACGCTCCAAGCGCAGCAAGCCGGC...TCCCAGGGAGCCTAGAATGGAATGGATTAAAATCCCTGGGAGTGGCTGAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTCGGATATTGGCCGGCTaGCTGCGCTTGGAGCGTAGG +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVRILAG*LRLERR
Trigger: CCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCCG...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GGGTCTCAGCCACTCCCAGGGATTTTAATCCATTCCATTCTAGGCTCCCTGGGACTTCGGATGTCATCTTaGCTCAGCCAGGAGGGGGCG +
Preference number: 5 (lower is better)
Translates to: GSQPLPGILIHSILGSLGLRMSS*LSQEGA
Trigger: CGCCCCCTCCTGGCTGAGCAAAGATGACATCCGAAG...TCCCAGGGAGCCTAGAATGGAATGGATTAAAATCCCTGGGAGTGGCTGAGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGACGGCAGGGTCCTGTaGAGCCCCAGGATCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVDGRVL*SPRILS
Trigger: AGACAGGATCCTGGGGCTCAACAGGACCCTGCCGTC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS CCA 90 bp CATGGTTTCCTGACTTCAGCTGCCGCGTCCGCTTCGGGATATAAGTaGTCTCCAGTGGGCAGAGGTGGAAGGAAAGGGTTGGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: HGFLTSAAASASGYK*SPVGRGGRKGLVMK
Trigger: CTTCATCACCAACCCTTTCCTTCCACCTCTGCCCACTGGAGACCACTTATATCCCGAAGCGGACGCGGCAGCTGAAGTCAGGAAACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTTGCTTTTTCCTGCGCTaGGGCTTCACGGTGCCACGG +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVCFFLR*GFTVPR
Trigger: CCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCA...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTCTTCGGATGTCATCTTaGCTCAGCCAGGAGGGGGCG +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVLRMSS*LSQEGA
Trigger: CGCCCCCTCCTGGCTGAGCAAAGATGACATCCGAAG...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GGGTCTCAGCCACTCCCAGGGATTTTAATCCATTCCATTCTAGGCTCCCTGGGAATGTCCAAGGGCTGCTaGAGAAGCCCACAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: GSQPLPGILIHSILGSLGMSKGC*RSPQGL
Trigger: TAGCCCCTGTGGGCTTCTCAAGCAGCCCTTGGACAT...TCCCAGGGAGCCTAGAATGGAATGGATTAAAATCCCTGGGAGTGGCTGAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp CTTTGCCTCCAGCCTAGCTTCCTCTCCTCATCATGCAAATTGCCGTTGGCTTTACAGCATCAGCTTCCCTaGCCGCTTCCTGCGGCTGAA +
Preference number: 5 (lower is better)
Translates to: LCLQPSFLSSSCKLPLALQHQLP*PLPAAE
Trigger: TTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCTG...TAAAGCCAACGGCAATTTGCATGATGAGGAGAGGAAGCTAGGCTGGAGGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp CCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATCGGATATTGGCCGGCTaGCTGCGCTTGGAGCGTAGG +
Preference number: 5 (lower is better)
Translates to: PPASPFTPHGSSLDNKLHRILAG*LRLERR
Trigger: CCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCCG...ATGTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGGTGGAAGGAAAGGGTaGGTGATGAAGCTGGGAATG +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVGGRKG*VMKLGM
Trigger: CATTCCCAGCTTCATCACCAACCCTTTCCTTCCACC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATGCCGGCTTGCTGCGCTaGGAGCGTAGGGTAATGTAC +
Preference number: 5 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDAGLLR*ERRVMY
Trigger: GTACATTACCCTACGCTCCAAGCGCAGCAAGCCGGC...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATTGCTTTTTCCTGCGCTaGGGCTTCACGGTGCCACGG +
Preference number: 5 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDCFFLR*GFTVPR
Trigger: CCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCA...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCTTCGGATGTCATCTTaGCTCAGCCAGGAGGGGGCG +
Preference number: 5 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDLRMSS*LSQEGA
Trigger: CGCCCCCTCCTGGCTGAGCAAAGATGACATCCGAAG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTTCAGCTCTGATGCTCTaGCAGGCTGTAAGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVSALML*QAVSLS
Trigger: ACTGAGGCTTACAGCCTGCAAGAGCATCAGAGCTGA...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS GCA 90 bp GCTGCAAATAACGAAGCATGTGAATCTGTTACCTTGGATGAACTCTaGTTTCCTGCTCACAGACGGCAGGGTCCTGTTGAGCCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: AANNEACESVTLDEL*FPAHRRQGPVEPQD
Trigger: ATCCTGGGGCTCAACAGGACCCTGCCGTCTGTGAGCAGGAAAGCAGAGTTCATCCAAGGTAACAGATTCACATGCTTCGTTATTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS GCA 90 bp CCAGGCTGGGAAAATAAAGAATGCCAAGCGCATGGAAAGACACGCTaGTGCTGCTGCTGTCCAAATGTGAACCGTGGGTGGAGAAAAATC +
Preference number: 5 (lower is better)
Translates to: PGWENKECQAHGKTR*CCCCPNVNRGWRKI
Trigger: GATTTTTCTCCACCCACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTATTTTCCCAGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGGTTTCTCCGGGTCCTaGGACGCCGGCTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VVYFSNNRRNREKTGENVGFSGS*DAGCSR
Trigger: TCTGGAGCAGCCGGCGTCCAAGGACCCGGAGAAACC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGACGGTGCCACGGATATaGGCCGGCTTGCTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVTVPRI*AGLLRL
Trigger: CAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCGT...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CCTCCCATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCACGGTGCCACGGATATaGGCCGGCTTGCTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: PPIVTYLIVCLTVSKFFATVPRI*AGLLRL
Trigger: CAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCGT...GGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp AGTTATGTTCTGAAGTTTGCTGGGTCTATAGTCAAAACCCAGCTTAGCCACCTAGACGGCAGGGTCCTGTaGAGCCCCAGGATCCTGTCT +
Preference number: 5 (lower is better)
Translates to: SYVLKFAGSIVKTQLSHLDGRVL*SPRILS
Trigger: AGACAGGATCCTGGGGCTCAACAGGACCCTGCCGTC...TAGGTGGCTAAGCTGGGTTTTGACTATAGACCCAGCAAACTTCAGAACATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCAACCCGATTCAGGCTaGGGTACTCGGCCATTCTGC +
Preference number: 5 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDQPDSG*GTRPFC
Trigger: GCAGAATGGCCGAGTACCCAAGCCTGAATCGGGTTG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CCAGGCTGGGAAAATAAAGAATGCCAAGCGCATGGAAAGACACGCTGCTGCTGCAAGGAGAAATGCGGCTaGTTTCTTACCATCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PGWENKECQAHGKTRCCCKEKCG*FLTILA
Trigger: GGCCAAGATGGTAAGAAACAAGCCGCATTTCTCCTT...GCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTATTTTCCCAGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp CCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATATGAGCTGCCCCGGCTaGTCTGGACAGGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: PPASPFTPHGSSLDNKLHMSCPG*SGQVIS
Trigger: AGAAATGACCTGTCCAGACAAGCCGGGGCAGCTCAT...ATGTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp GGAGATTATGTGAGGAATTCAATGAACTTGGTACCTCATGTGCTTGGTACAATAGGTTTCTCCGGGTCCTaGGACGCCGGCTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GDYVRNSMNLVPHVLGTIGFSGS*DAGCSR
Trigger: TCTGGAGCAGCCGGCGTCCAAGGACCCGGAGAAACC...TATTGTACCAAGCACATGAGGTACCAAGTTCATTGAATTCCTCACATAATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAACGGTGCCACGGATATaGGCCGGCTTGCTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: VVYFSNNRRNREKTGENVTVPRI*AGLLRL
Trigger: CAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCGT...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGACGGCAGGGTCCTGTaGAGCCCCAGGATCCTGTCT +
Preference number: 5 (lower is better)
Translates to: VVYFSNNRRNREKTGENVDGRVL*SPRILS
Trigger: AGACAGGATCCTGGGGCTCAACAGGACCCTGCCGTC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTAAGGAGAAATGCGGCTaGTTTCTTACCATCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVKEKCG*FLTILA
Trigger: GGCCAAGATGGTAAGAAACAAGCCGCATTTCTCCTT...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATCGCTGCTGCTGCTGCTaGGATGAACTCTGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDRCCCC*DELCFP
Trigger: AGGAAAGCAGAGTTCATCCAAGCAGCAGCAGCAGCG...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393807.9
CDS-3UTR CAA 90 bp CCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACATCCATTGGAAATGCAGTaGGGTCTCAGCCACTCCCAG +
Preference number: 5 (lower is better)
Translates to: PPASPFTPHGSSLDNKLHPLEMQ*GLSHSQ
Trigger: CTGGGAGTGGCTGAGACCCAACTGCATTTCCAATGG...ATGTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS GCA 90 bp GGCTGGGAAAATAAAGAATGCCAAGCGCATGGAAAGACACGCTGCTaGTGCTGCTGTCCAAATGTGAACCGTGGGTGGAGAAAAATCATT +
Preference number: 5 (lower is better)
Translates to: GWENKECQAHGKTRC*CCCPNVNRGWRKII
Trigger: AATGATTTTTCTCCACCCACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTCTTTATTTTCCCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS CCA 90 bp GGGTCATGCTTTCGCTGGATAATGTGTGCTAGAGCCGCAGAACCTTaGTCATCACATTTTGGCCTCAATCCATTCTGTACACAGGCATCT +
Preference number: 5 (lower is better)
Translates to: GSCFRWIMCARAAEP*SSHFGLNPFCTQAS
Trigger: AGATGCCTGTGTACAGAATGGATTGAGGCCAAAATGTGATGACCAAGGTTCTGCGGCTCTAGCACACATTATCCAGCGAAAGCATGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGGTTTCTCCGGGTCCTaGGACGCCGGCTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLGFSGS*DAGCSR
Trigger: TCTGGAGCAGCCGGCGTCCAAGGACCCGGAGAAACC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTACAGCATCAGCTTCCCTaGCCGCTTCCTGCGGCTGAA +
Preference number: 5 (lower is better)
Translates to: VVYFSNNRRNREKTGENVQHQLP*PLPAAE
Trigger: TTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCTG...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGATGTCCAAGGGCTGCTaGAGAAGCCCACAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVMSKGC*RSPQGL
Trigger: TAGCCCCTGTGGGCTTCTCAAGCAGCCCTTGGACAT...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GCTCTGCGCGGCTTAAGAAGATTCCATCTGCTCAAGAACGATAACCCGCTTCCCATAATGCTAAAGCCATaGGAAATGCAGTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: ALRGLRRFHLLKNDNPLPIMLKP*EMQLGL
Trigger: GAGACCCAACTGCATTTCCAATGGCTTTAGCATTAT...GGGAAGCGGGTTATCGTTCTTGAGCAGATGGAATCTTCTTAAGCCGCGCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS CCA 90 bp TGGACCACTCATGATGATGTATTTCAGTACAACCCGATTCAGGCTTaGGTACTCGGCCATTCTGCCAGCATTTCTGTTTCAGCAACTGCT +
Preference number: 5 (lower is better)
Translates to: WTTHDDVFQYNPIQA*VLGHSASISVSATA
Trigger: AGCAGTTGCTGAAACAGAAATGCTGGCAGAATGGCCGAGTACCCAAGCCTGAATCGGGTTGTACTGAAATACATCATCATGAGTGGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS-3UTR CAA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGATGAGCTGCCCCGGCTaGTCTGGACAGGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVMSCPG*SGQVIS
Trigger: AGAAATGACCTGTCCAGACAAGCCGGGGCAGCTCAT...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTACGGATATTGGCCGGCTaGCTGCGCTTGGAGCGTAGG +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLRILAG*LRLERR
Trigger: CCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCCG...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp TTACATATTCACCTAAGTCCAGTGGCTAAGAAGTTATGTTCTGAAGTTTGCTGGTGCTTTTTCCTGCGCTaGGGCTTCACGGTGCCACGG +
Preference number: 5 (lower is better)
Translates to: LHIHLSPVAKKLCSEVCWCFFLR*GFTVPR
Trigger: CCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCA...CCAGCAAACTTCAGAACATAACTTCTTAGCCACTGGACTTAGGTGAATATGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGCATGGGCGGCCATCTaGGATGAACTCTGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVAWAAI*DELCFP
Trigger: AGGAAAGCAGAGTTCATCCAAGATGGCCGCCCATGC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTTCCTTGTCTACCTCCTaGACTTTCCCAATACACTTT +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVSLSTS*TFPIHF
Trigger: AAAGTGTATTGGGAAAGTCAAGGAGGTAGACAAGGA...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GCCCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACCTGACTCACTGTACTTaGTATTCGAGCCCTGGAATA +
Preference number: 5 (lower is better)
Translates to: AHQHLLSRHTVPVWIISYLTHCT*YSSPGI
Trigger: TATTCCAGGGCTCGAATACAAAGTACAGTGAGTCAG...GTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGGTGGAAGGAAAGGGTaGGTGATGAAGCTGGGAATG +
Preference number: 5 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVGGRKG*VMKLGM
Trigger: CATTCCCAGCTTCATCACCAACCCTTTCCTTCCACC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GGTGGACTGCTTTATAAACTTGAGACATCAAAGCATACCTGTGAATCTGGAGCAGGTGGAAGGAAAGGGTaGGTGATGAAGCTGGGAATG +
Preference number: 5 (lower is better)
Translates to: GGLLYKLETSKHTCESGAGGRKG*VMKLGM
Trigger: CATTCCCAGCTTCATCACCAACCCTTTCCTTCCACC...TGCTCCAGATTCACAGGTATGCTTTGATGTCTCAAGTTTATAAAGCAGTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp CCTCCCATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCGTAATGTACACCACATaGGGCTGCAGAGTGGACCCA +
Preference number: 5 (lower is better)
Translates to: PPIVTYLIVCLTVSKFFAVMYTT*GCRVDP
Trigger: TGGGTCCACTCTGCAGCCCAATGTGGTGTACATTAC...GGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGCCGGCTTGCTGCGCTaGGAGCGTAGGGTAATGTAC +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLAGLLR*ERRVMY
Trigger: GTACATTACCCTACGCTCCAAGCGCAGCAAGCCGGC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCCGGATATTGGCCGGCTaGCTGCGCTTGGAGCGTAGG +
Preference number: 5 (lower is better)
Translates to: INMFLGLSFNKHFGITGGRILAG*LRLERR
Trigger: CCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCCG...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTATGCTTTTTCCTGCGCTaGGGCTTCACGGTGCCACGG +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLCFFLR*GFTVPR
Trigger: CCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCA...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTACAGCATCAGCTTCCCTaGCCGCTTCCTGCGGCTGAA +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLQHQLP*PLPAAE
Trigger: TTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCTG...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGCATGGGCGGCCATCTaGGATGAACTCTGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: VVYFSNNRRNREKTGENVAWAAI*DELCFP
Trigger: AGGAAAGCAGAGTTCATCCAAGATGGCCGCCCATGC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTTTCATAGGTAATACTTaGACCCCGTGTGCATTGATA +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVFIGNT*TPCALI
Trigger: TATCAATGCACACGGGGTCAAAGTATTACCTATGAA...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTGTCAGTGTCTCTGGTTaGCAGTTTTCTATTAAACAG +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVVSVSG*QFSIKQ
Trigger: CTGTTTAATAGAAAACTGCAAACCAGAGACACTGAC...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATTGTTCCAATGTAGAGTaGCCTCAGGGTAGTGTAGAG +
Preference number: 5 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDCSNVE*PQGSVE
Trigger: CTCTACACTACCCTGAGGCAACTCTACATTGGAACA...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGTCAGCTCTGATGCTCTaGCAGGCTGTAAGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVSALML*QAVSLS
Trigger: ACTGAGGCTTACAGCCTGCAAGAGCATCAGAGCTGA...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTCCATATGTGATGATCTaGGATATTGGCAAAGGACAT +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVPYVMI*DIGKGH
Trigger: ATGTCCTTTGCCAATATCCAAGATCATCACATATGG...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTAGGATGTCAGGCAACTaGCCAAAAGAGTTATTTCAA +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVRMSGN*PKELFQ
Trigger: TTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCT...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATTGCAAATATGCCACCTaGGTAAGACAGGATGTCAGG +
Preference number: 5 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDCKYAT*VRQDVR
Trigger: CCTGACATCCTGTCTTACCAAGGTGGCATATTTGCA...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp AGTTATGTTCTGAAGTTTGCTGGGTCTATAGTCAAAACCCAGCTTAGCCACCTACGCAGACCAGTCCTTTaGCTGGCAACTGCAGTAACT +
Preference number: 5 (lower is better)
Translates to: SYVLKFAGSIVKTQLSHLRRPVL*LATAVT
Trigger: AGTTACTGCAGTTGCCAGCAAAAGGACTGGTCTGCG...TAGGTGGCTAAGCTGGGTTTTGACTATAGACCCAGCAAACTTCAGAACATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp GCCCACCAGCATCTCCTTTCACGCCACACGGTTCCAGTTTGGATAATAAGTTACAGGAATTCAATGAACTaGGTACCTCATGTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: AHQHLLSRHTVPVWIISYRNSMN*VPHVLG
Trigger: ACCAAGCACATGAGGTACCAAGTTCATTGAATTCCT...GTAACTTATTATCCAAACTGGAACCGTGTGGCGTGAAAGGAGATGCTGGTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCCAGCATCAGCTTCCCTaGCCGCTTCCTGCGGCTGAA +
Preference number: 5 (lower is better)
Translates to: INMFLGLSFNKHFGITGGQHQLP*PLPAAE
Trigger: TTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCTG...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAATGTCCAAGGGCTGCTaGAGAAGCCCACAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLMSKGC*RSPQGL
Trigger: TAGCCCCTGTGGGCTTCTCAAGCAGCCCTTGGACAT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTAATGGGTGTCATTACTaGCTGAAGATAAAGATGCAT +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVNGCHY*LKIKMH
Trigger: ATGCATCTTTATCTTCAGCAAGTAATGACACCCATT...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR CAA 90 bp CTCACGTGGGAAGACCAGGCTGCCCAACAGCATTGTAGCTTGAGACTCAAAGTTATAATCGGAGTGCATTaGAAATGCACAGAGTATTCT +
Preference number: 5 (lower is better)
Translates to: LTWEDQAAQQHCSLRLKVIIGVH*KCTEYS
Trigger: AGAATACTCTGTGCATTTCAAATGCACTCCGATTAT...AACTTTGAGTCTCAAGCTACAATGCTGTTGGGCAGCCTGGTCTTCCCACGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS GCA 90 bp TCAAAGAAACCCTTGTTGTCTATAAAAACCAAATGCCTTGGGTCATaGTTTCGCTGGATAATGTGTGCTAGAGCCGCAGAACCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: SKKPLLSIKTKCLGS*FRWIMCARAAEPWS
Trigger: TGACCAAGGTTCTGCGGCTCTAGCACACATTATCCAGCGAAAGCATGACCCAAGGCATTTGGTTTTTATAGACAACAAGGGTTTCTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS GCA 90 bp TCTTCACTCCTGTCAAAGAAACCCTTGTTGTCTATAAAAACCAAATaGCTTGGGTCATGCTTTCGCTGGATAATGTGTGCTAGAGCCGCA +
Preference number: 5 (lower is better)
Translates to: SSLLSKKPLLSIKTK*LGSCFRWIMCARAA
Trigger: TGCGGCTCTAGCACACATTATCCAGCGAAAGCATGACCCAAGGCATTTGGTTTTTATAGACAACAAGGGTTTCTTTGACAGGAGTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS CCA 90 bp CCCTTGTTGTCTATAAAAACCAAATGCCTTGGGTCATGCTTTCGCTaGATAATGTGTGCTAGAGCCGCAGAACCTTGGTCATCACATTTT +
Preference number: 5 (lower is better)
Translates to: PLLSIKTKCLGSCFR*IMCARAAEPWSSHF
Trigger: AAAATGTGATGACCAAGGTTCTGCGGCTCTAGCACACATTATCCAGCGAAAGCATGACCCAAGGCATTTGGTTTTTATAGACAACAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS-3UTR CAA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGGGTGGAAGGAAAGGGTaGGTGATGAAGCTGGGAATG +
Preference number: 5 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLGGRKG*VMKLGM
Trigger: CATTCCCAGCTTCATCACCAACCCTTTCCTTCCACC...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCCAACCCGATTCAGGCTaGGGTACTCGGCCATTCTGC +
Preference number: 5 (lower is better)
Translates to: INMFLGLSFNKHFGITGGQPDSG*GTRPFC
Trigger: GCAGAATGGCCGAGTACCCAAGCCTGAATCGGGTTG...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATTCCTTGTCTACCTCCTaGACTTTCCCAATACACTTT +
Preference number: 5 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDSLSTS*TFPIHF
Trigger: AAAGTGTATTGGGAAAGTCAAGGAGGTAGACAAGGA...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGATCTACACTGCCTCATaGCTAAACGGGCTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVIYTAS*LNGLEV
Trigger: AACCTCAAGCCCGTTTAGCAATGAGGCAGTGTAGAT...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATACACATGAACCTGATTaGTCCATGTCTTCCAATCTG +
Preference number: 5 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDTHEPD*SMSSNL
Trigger: CAGATTGGAAGACATGGACAAATCAGGTTCATGTGT...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CCTCCCATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCTCTTGGCCGTTTCATTaGTCTTCCACCAGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: PPIVTYLIVCLTVSKFFASWPFH*SSTSSG
Trigger: TCCAGAACTGGTGGAAGACAAATGAAACGGCCAAGA...GGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATGGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATGCTCTAAATGTGTGCTaGTTCTGTGCTGACATAAAC +
Preference number: 5 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDALNVC*FCADIN
Trigger: GTTTATGTCAGCACAGAACAAGCACACATTTAGAGC...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585682.6
CDS-3UTR CAA 90 bp GGTGGACTGCTTTATAAACTTGAGACATCAAAGCATACCTGTGAATCTGGAGCAAACCTGCCAAAATGTTaGTCACCCAAGACGGGAGAA +
Preference number: 5 (lower is better)
Translates to: GGLLYKLETSKHTCESGANLPKC*SPKTGE
Trigger: TTCTCCCGTCTTGGGTGACAAACATTTTGGCAGGTT...TGCTCCAGATTCACAGGTATGCTTTGATGTCTCAAGTTTATAAAGCAGTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCATGAGCTGCCCCGGCTaGTCTGGACAGGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: INMFLGLSFNKHFGITGGMSCPG*SGQVIS
Trigger: AGAAATGACCTGTCCAGACAAGCCGGGGCAGCTCAT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGTAATGTACACCACATaGGGCTGCAGAGTGGACCCA +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLVMYTT*GCRVDP
Trigger: TGGGTCCACTCTGCAGCCCAATGTGGTGTACATTAC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATAAGCTTTTCAATTCCTaGTCTACCTCCTTGACTTTC +
Preference number: 5 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDKLFNS*STSLTF
Trigger: GAAAGTCAAGGAGGTAGACAAGGAATTGAAAAGCTT...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAATCTACACTGCCTCATaGCTAAACGGGCTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: VVYFSNNRRNREKTGENVIYTAS*LNGLEV
Trigger: AACCTCAAGCCCGTTTAGCAATGAGGCAGTGTAGAT...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTAGAAGCAGAGGGAGACACTCGGGTCAATAGAGGGAAAATTGAAGAGGAAGATAGGATGTCAGGCAACTaGCCAAAAGAGTTATTTCAA +
Preference number: 5 (lower is better)
Translates to: VEAEGDTRVNRGKIEEEDRMSGN*PKELFQ
Trigger: TTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCT...ATCTTCCTCTTCAATTTTCCCTCTATTGACCCGAGTGTCTCCCTCTGCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp AACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCTCCAGCCTAGCGTACATTTTAGCCTCTaGGGCCAATCTGGATTCAAA +
Preference number: 5 (lower is better)
Translates to: NLFNSMPDCQQVLCLQPSVHFSL*GQSGFK
Trigger: TTTGAATCCAGATTGGCCCAAGAGGCTAAAATGTAC...GCTAGGCTGGAGGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCGTAATGTACACCACATaGGGCTGCAGAGTGGACCCA +
Preference number: 5 (lower is better)
Translates to: INMFLGLSFNKHFGITGGVMYTT*GCRVDP
Trigger: TGGGTCCACTCTGCAGCCCAATGTGGTGTACATTAC...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGTGTTCCAATGTAGAGTaGCCTCAGGGTAGTGTAGAG +
Preference number: 5 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLCSNVE*PQGSVE
Trigger: CTCTACACTACCCTGAGGCAACTCTACATTGGAACA...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGTGCAAATATGCCACCTaGGTAAGACAGGATGTCAGG +
Preference number: 5 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLCKYAT*VRQDVR
Trigger: CCTGACATCCTGTCTTACCAAGGTGGCATATTTGCA...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CCTCCCATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCCAAGACGGGAGAATCTaGAAAGACAGACTCAATAGA +
Preference number: 5 (lower is better)
Translates to: PPIVTYLIVCLTVSKFFAQDGRI*KDRLNR
Trigger: TCTATTGAGTCTGTCTTTCAAGATTCTCCCGTCTTG...GGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATGGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS TCA 90 bp TTGGCCTCAATCCATTCTGTACACAGGCATCTTCCTTGCGAGGTCTaGATCCACAGCAATTTGTATCTAAGCGATTATAAATCTGTAACA +
Preference number: 5 (lower is better)
Translates to: LASIHSVHRHLPCEV*IHSNLYLSDYKSVT
Trigger: TGTTACAGATTTATAATCGCTTAGATACAAATTGCTGTGGATTCAGACCTCGCAAGGAAGATGCCTGTGTACAGAATGGATTGAGGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS-3UTR CAA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGCCATATGTGATGATCTaGGATATTGGCAAAGGACAT +
Preference number: 5 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVPYVMI*DIGKGH
Trigger: ATGTCCTTTGCCAATATCCAAGATCATCACATATGG...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGGCCTCTATTGTAACGTaGTTAGTAGTTCTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVASIVT*LVVLFH
Trigger: GTGAAAGAGAACTACTAACAACGTTACAATAGAGGC...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTATGCAAATATGCCACCTaGGTAAGACAGGATGTCAGG +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLCKYAT*VRQDVR
Trigger: CCTGACATCCTGTCTTACCAAGGTGGCATATTTGCA...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTATCTTGGCCGTTTCATTaGTCTTCCACCAGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLSWPFH*SSTSSG
Trigger: TCCAGAACTGGTGGAAGACAAATGAAACGGCCAAGA...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAAAGGAGAAATGCGGCTaGTTTCTTACCATCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLKEKCG*FLTILA
Trigger: GGCCAAGATGGTAAGAAACAAGCCGCATTTCTCCTT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GGTGGACTGCTTTATAAACTTGAGACATCAAAGCATACCTGTGAATCTGGAGCATCCTCATCATGCAAATaGCCGTTGGCTTTAATTAGA +
Preference number: 5 (lower is better)
Translates to: GGLLYKLETSKHTCESGASSSCK*PLALIR
Trigger: TCTAATTAAAGCCAACGGCAATTTGCATGATGAGGA...TGCTCCAGATTCACAGGTATGCTTTGATGTCTCAAGTTTATAAAGCAGTCCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp CCTCCCATAGTAACCTATTTAATAGTATGCCTGACTGTCAGCAAGTTCTTTGCCCAGCTTATAATCTCTTaGGGGTACATTTTAGCCTCT +
Preference number: 5 (lower is better)
Translates to: PPIVTYLIVCLTVSKFFAQLIIS*GYILAS
Trigger: AGAGGCTAAAATGTACCCCAAAGAGATTATAAGCTG...GGCAAAGAACTTGCTGACAGTCAGGCATACTATTAAATAGGTTACTATGGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCTGTTCCAATGTAGAGTaGCCTCAGGGTAGTGTAGAG +
Preference number: 5 (lower is better)
Translates to: INMFLGLSFNKHFGITGGCSNVE*PQGSVE
Trigger: CTCTACACTACCCTGAGGCAACTCTACATTGGAACA...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGACACATGAACCTGATTaGTCCATGTCTTCCAATCTG +
Preference number: 5 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLTHEPD*SMSSNL
Trigger: CAGATTGGAAGACATGGACAAATCAGGTTCATGTGT...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTACCATATGTGATGATCTaGGATATTGGCAAAGGACAT +
Preference number: 5 (lower is better)
Translates to: VVYFSNNRRNREKTGENVPYVMI*DIGKGH
Trigger: ATGTCCTTTGCCAATATCCAAGATCATCACATATGG...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GTGGTGTATTTCAGCAATAACAGACGTAACCGTGAAAAGACAGGAGAGAATGTAGCCTCTATTGTAACGTaGTTAGTAGTTCTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: VVYFSNNRRNREKTGENVASIVT*LVVLFH
Trigger: GTGAAAGAGAACTACTAACAACGTTACAATAGAGGC...TACATTCTCTCCTGTCTTTTCACGGTTACGTCTGTTATTGCTGAAATACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CTTGGTAAGACAGGATGTCAGGCAACTTGCCAAAAGAGTTATTTCAAGTCAGTGATAATCGGAGTGCATTaGAAATGCACAGAGTATTCT +
Preference number: 5 (lower is better)
Translates to: LGKTGCQATCQKSYFKSVIIGVH*KCTEYS
Trigger: AGAATACTCTGTGCATTTCAAATGCACTCCGATTAT...CACTGACTTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCTGTCTTACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGAAGCTTTTCAATTCCTaGTCTACCTCCTTGACTTTC +
Preference number: 5 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLKLFNS*STSLTF
Trigger: GAAAGTCAAGGAGGTAGACAAGGAATTGAAAAGCTT...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGTTCATAGGTAATACTTaGACCCCGTGTGCATTGATA +
Preference number: 5 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLFIGNT*TPCALI
Trigger: TATCAATGCACACGGGGTCAAAGTATTACCTATGAA...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGGCCTCTATTGTAACGTaGTTAGTAGTTCTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLASIVT*LVVLFH
Trigger: GTGAAAGAGAACTACTAACAACGTTACAATAGAGGC...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp GGGCTTGATAAAACCACACAGCTAGTTAGTATACATACTGAACAAATCACCAATTGTGAATCTGTTACCTaGGATGAACTCTGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: GLDKTTQLVSIHTEQITNCESVT*DELCFP
Trigger: AGGAAAGCAGAGTTCATCCAAGGTAACAGATTCACA...ATTGGTGATTTGTTCAGTATGTATACTAACTAGCTGTGTGGTTTTATCAAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp GGGCTTGATAAAACCACACAGCTAGTTAGTATACATACTGAACAAATCACCAATAGTATGGGCTTACTCTaGCATGTCCAATACAGCATT +
Preference number: 5 (lower is better)
Translates to: GLDKTTQLVSIHTEQITNSMGLL*HVQYSI
Trigger: AATGCTGTATTGGACATGCAAGAGTAAGCCCATACT...ATTGGTGATTTGTTCAGTATGTATACTAACTAGCTGTGTGGTTTTATCAAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS-3UTR CAA 90 bp CAGTCAAAACGGCACAAAATATGGTTTATTAATGGAGTCAGTGTCTCTGGTTTGAATGGGTGTCATTACTaGCTGAAGATAAAGATGCAT +
Preference number: 5 (lower is better)
Translates to: QSKRHKIWFINGVSVSGLNGCHY*LKIKMH
Trigger: ATGCATCTTTATCTTCAGCAAGTAATGACACCCATT...CAAACCAGAGACACTGACTCCATTAATAAACCATATTTTGTGCCGTTTTGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAAGGATGTCAGGCAACTaGCCAAAAGAGTTATTTCAA +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLRMSGN*PKELFQ
Trigger: TTGAAATAACTCTTTTGGCAAGTTGCCTGACATCCT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAGCTTTAAAAGCTCCCTaGAAAACTACTGATTGCAAA +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLALKAP*KTTDCK
Trigger: TTTGCAATCAGTAGTTTTCAAGGGAGCTTTTAAAGC...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296530.12
CDS-3UTR CAA 90 bp ATAAACATGTTCCTGGGACTTTCATTTAATAAGCATTTTGGAATAACTGGAGGCAAGCTTTTCAATTCCTaGTCTACCTCCTTGACTTTC +
Preference number: 5 (lower is better)
Translates to: INMFLGLSFNKHFGITGGKLFNS*STSLTF
Trigger: GAAAGTCAAGGAGGTAGACAAGGAATTGAAAAGCTT...GCCTCCAGTTATTCCAAAATGCTTATTAAATGAAAGTCCCAGGAACATGTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS-3UTR CAA 90 bp AGTTATTTCAAGTCAGTGGCTCAAAGTAGGATTCCAGTCTCCAAACTTTTGTTAATAATCGGAGTGCATTaGAAATGCACAGAGTATTCT +
Preference number: 5 (lower is better)
Translates to: SYFKSVAQSRIPVSKLLLIIGVH*KCTEYS
Trigger: AGAATACTCTGTGCATTTCAAATGCACTCCGATTAT...TAACAAAAGTTTGGAGACTGGAATCCTACTTTGAGCCACTGACTTGAAATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
CDS GCA 72 bp CGGCTGCGATGTGGCCCCTTCTCAGCCGCCTGTCCATaGTGGAGAGAGGCCCTCCCCACCTGGCTCACCAGG +
Preference number: 6 (lower is better)
Translates to: RLRCGPFSAACP*WREALPTWLTR
Trigger: CCTGGTGAGCCAGGTGGGGAGGGCCTCTCTCCAGCATGGACAGGCGGCTGAGAAGGGGCCACATCGCAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp CCAGCAGAAGGTTTCTCCGGGTCCTTGGACGCCGGCTaGTCCAGAGCTTACGCACCCGCGGGACGCACAGGG +
Preference number: 6 (lower is better)
Translates to: PAEGFSGSLDAG*SRAYAPAGRTG
Trigger: CCCTGTGCGTCCCGCGGGTGCGTAAGCTCTGGAGCAGCCGGCGTCCAAGGACCCGGAGAAACCTTCTGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 72 bp ACACGCAGTGCCCAGCAGAAGGTTTCTCCGGGTCCTTaGACGCCGGCTGCTCCAGAGCTTACGCACCCGCGG +
Preference number: 6 (lower is better)
Translates to: TRSAQQKVSPGP*TPAAPELTHPR
Trigger: CCGCGGGTGCGTAAGCTCTGGAGCAGCCGGCGTCCAAGGACCCGGAGAAACCTTCTGCTGGGCACTGCGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 72 bp CTGCGATGTGGCCCCTTCTCAGCCGCCTGTCCATGCTaGAGAGAGGCCCTCCCCACCTGGCTCACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: LRCGPFSAACPC*REALPTWLTRK
Trigger: CTTCCTGGTGAGCCAGGTGGGGAGGGCCTCTCTCCAGCATGGACAGGCGGCTGAGAAGGGGCCACATCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 72 bp GGCCAGGGTACCATCCAGGGGTATCTCAGGGAAGGATaGCTCGGCGGTGTCGCGGCTGCGATGTGGCCCCTT +
Preference number: 6 (lower is better)
Translates to: GQGTIQGYLREG*LGGVAAAMWPL
Trigger: AAGGGGCCACATCGCAGCCGCGACACCGCCGAGCCATCCTTCCCTGAGATACCCCTGGATGGTACCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 72 bp CACACGCAGTGCCCAGCAGAAGGTTTCTCCGGGTCCTaGGACGCCGGCTGCTCCAGAGCTTACGCACCCGCG +
Preference number: 6 (lower is better)
Translates to: HTQCPAEGFSGS*DAGCSRAYAPA
Trigger: CGCGGGTGCGTAAGCTCTGGAGCAGCCGGCGTCCAAGGACCCGGAGAAACCTTCTGCTGGGCACTGCGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 72 bp ATCAGCTTCCCTTGCCGCTTCCTGCGGCTGAAGGGATaGTCCGACCAAAGCCTCCTGCCCTGGGGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: ISFPCRFLRLKG*SDQSLLPWGSR
Trigger: TCGGCTGCCCCAGGGCAGGAGGCTTTGGTCGGACCATCCCTTCAGCCGCAGGAAGCGGCAAGGGAAGCTGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS TCA 72 bp GCTACAGCATCAGCTTCCCTTGCCGCTTCCTGCGGCTaGAGGGATGGTCCGACCAAAGCCTCCTGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: ATASASLAASCG*RDGPTKASCPG
Trigger: CCCAGGGCAGGAGGCTTTGGTCGGACCATCCCTTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCTGTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp GCCCTGGGGCAGCCGATGCCACTGCATGCTTTTTCCTaGGCTTGGGCTTCACGGTGCCACGGATATTGGCCG +
Preference number: 6 (lower is better)
Translates to: ALGQPMPLHAFS*AWASRCHGYWP
Trigger: CGGCCAATATCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp AAAGCCTCCTGCCCTGGGGCAGCCGATGCCACTGCATaGTTTTTCCTGCGCTTGGGCTTCACGGTGCCACGG +
Preference number: 6 (lower is better)
Translates to: KASCPGAADATA*FFLRLGFTVPR
Trigger: CCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGGCAGGAGGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp GACCAAAGCCTCCTGCCCTGGGGCAGCCGATGCCACTaGATGCTTTTTCCTGCGCTTGGGCTTCACGGTGCC +
Preference number: 6 (lower is better)
Translates to: DQSLLPWGSRCH*MLFPALGLHGA
Trigger: GGCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGGCAGGAGGCTTTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp TCCGCTCCTAGAGGACACAGGCCGGAGCCCTGCCACTaGGCTGTCCGCCAAGAGTCGCATTCTTCGGATGTC +
Preference number: 6 (lower is better)
Translates to: SAPRGHRPEPCH*AVRQESHSSDV
Trigger: GACATCCGAAGAATGCGACTCTTGGCGGACAGCGCAGTGGCAGGGCTCCGGCCTGTGTCCTCTAGGAGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 72 bp CGGCTGAAGGGATGGTCCGACCAAAGCCTCCTGCCCTaGGGCAGCCGATGCCACTGCATGCTTTTTCCTGCG +
Preference number: 6 (lower is better)
Translates to: RLKGWSDQSLLP*GSRCHCMLFPA
Trigger: CGCAGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGGCAGGAGGCTTTGGTCGGACCATCCCTTCAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 90 bp TTGGCCGGCTTGCTGCGCTTGGAGCGTAGGGTAATGTACACCACATaGGGCTGCAGAGTGGACCCATTGCCCTGGGACTCTGGAGGGGCC +
Preference number: 6 (lower is better)
Translates to: LAGLLRLERRVMYTT*GCRVDPLPWDSGGA
Trigger: GGCCCCTCCAGAGTCCCAGGGCAATGGGTCCACTCTGCAGCCCAATGTGGTGTACATTACCCTACGCTCCAAGCGCAGCAAGCCGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp GGCTCACCAGGAAGCCCAAGTAGATGGCACACGCAGTaGCCAGCAGAAGGTTTCTCCGGGTCCTTGGACGCC +
Preference number: 6 (lower is better)
Translates to: GSPGSPSRWHTQ*PAEGFSGSLDA
Trigger: GGCGTCCAAGGACCCGGAGAAACCTTCTGCTGGGCACTGCGTGTGCCATCTACTTGGGCTTCCTGGTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp TGGTCCGACCAAAGCCTCCTGCCCTGGGGCAGCCGATaGCACTGCATGCTTTTTCCTGCGCTTGGGCTTCAC +
Preference number: 6 (lower is better)
Translates to: WSDQSLLPWGSR*HCMLFPALGLH
Trigger: GTGAAGCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCCCCAGGGCAGGAGGCTTTGGTCGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 72 bp TACACCACATTGGGCTGCAGAGTGGACCCATTGCCCTaGGACTCTGGAGGGGCCAGGGTACCATCCAGGGGT +
Preference number: 6 (lower is better)
Translates to: YTTLGCRVDPLP*DSGGARVPSRG
Trigger: ACCCCTGGATGGTACCCTGGCCCCTCCAGAGTCCCAGGGCAATGGGTCCACTCTGCAGCCCAATGTGGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 72 bp GGGCAGCCGATGCCACTGCATGCTTTTTCCTGCGCTTaGGCTTCACGGTGCCACGGATATTGGCCGGCTTGC +
Preference number: 6 (lower is better)
Translates to: GQPMPLHAFSCA*ASRCHGYWPAC
Trigger: GCAAGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAGTGGCATCGGCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 90 bp GGTTTGCTCCCTGAGCGTACCCAGGTGCTACAGCATCAGCTTCCCTaGCCGCTTCCTGCGGCTGAAGGGATGGTCCGACCAAAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: GLLPERTQVLQHQLP*PLPAAEGMVRPKPP
Trigger: AGGAGGCTTTGGTCGGACCATCCCTTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCTGTAGCACCTGGGTACGCTCAGGGAGCAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 90 bp CTGTCTAGGTGGAAGGCAAACACCTCACTCATGTCCAAGGGCTGCTaGAGAAGCCCACAGGGGCTAGGGCCACAGCGGAGCACAGCGCCA +
Preference number: 6 (lower is better)
Translates to: LSRWKANTSLMSKGC*RSPQGLGPQRSTAP
Trigger: TGGCGCTGTGCTCCGCTGTGGCCCTAGCCCCTGTGGGCTTCTCAAGCAGCCCTTGGACATGAGTGAGGTGTTTGCCTTCCACCTAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp CCACTGCATGCTTTTTCCTGCGCTTGGGCTTCACGGTaGCACGGATATTGGCCGGCTTGCTGCGCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: PLHAFSCAWASR*HGYWPACCAWS
Trigger: GCTCCAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp CTGAGCGTACCCAGGTGCTACAGCATCAGCTTCCCTTaGCGCTTCCTGCGGCTGAAGGGATGGTCCGACCAA +
Preference number: 6 (lower is better)
Translates to: LSVPRCYSISFP*RFLRLKGWSDQ
Trigger: TTGGTCGGACCATCCCTTCAGCCGCAGGAAGCGGCAAGGGAAGCTGATGCTGTAGCACCTGGGTACGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp AGGTGGAAGGCAAACACCTCACTCATGTCCAAGGGCTaGTTGAGAAGCCCACAGGGGCTAGGGCCACAGCGG +
Preference number: 6 (lower is better)
Translates to: RWKANTSLMSKG*LRSPQGLGPQR
Trigger: CCGCTGTGGCCCTAGCCCCTGTGGGCTTCTCAAGCAGCCCTTGGACATGAGTGAGGTGTTTGCCTTCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 90 bp CGCTTGGGCTTCACGGTGCCACGGATATTGGCCGGCTTGCTGCGCTaGGAGCGTAGGGTAATGTACACCACATTGGGCTGCAGAGTGGAC +
Preference number: 6 (lower is better)
Translates to: RLGFTVPRILAGLLR*ERRVMYTTLGCRVD
Trigger: GTCCACTCTGCAGCCCAATGTGGTGTACATTACCCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp CGCTTGGAGCGTAGGGTAATGTACACCACATTGGGCTaGAGAGTGGACCCATTGCCCTGGGACTCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: RLERRVMYTTLG*RVDPLPWDSGG
Trigger: CCCTCCAGAGTCCCAGGGCAATGGGTCCACTCTGCAGCCCAATGTGGTGTACATTACCCTACGCTCCAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 72 bp GGCAGGGTCCTGTTGAGCCCCAGGATCCTGTCTAGGTaGAAGGCAAACACCTCACTCATGTCCAAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: GRVLLSPRILSR*KANTSLMSKGC
Trigger: GCAGCCCTTGGACATGAGTGAGGTGTTTGCCTTCCACCTAGACAGGATCCTGGGGCTCAACAGGACCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 72 bp CGCTTGGGCTTCACGGTGCCACGGATATTGGCCGGCTaGCTGCGCTTGGAGCGTAGGGTAATGTACACCACA +
Preference number: 6 (lower is better)
Translates to: RLGFTVPRILAG*LRLERRVMYTT
Trigger: TGTGGTGTACATTACCCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 90 bp TTTTTCCTGCGCTTGGGCTTCACGGTGCCACGGATATTGGCCGGCTaGCTGCGCTTGGAGCGTAGGGTAATGTACACCACATTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: FFLRLGFTVPRILAG*LRLERRVMYTTLGC
Trigger: GCAGCCCAATGTGGTGTACATTACCCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp GGGACGCACAGGGAGCAGATGAACCAGTTTATGAGCTaGCCCGGCTTGTCTGGACAGGTCATTTCTCTGCCG +
Preference number: 6 (lower is better)
Translates to: GTHREQMNQFMS*PGLSGQVISLP
Trigger: CGGCAGAGAAATGACCTGTCCAGACAAGCCGGGGCAGCTCATAAACTGGTTCATCTGCTCCCTGTGCGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp TGTCCGCCAAGAGTCGCATTCTTCGGATGTCATCTTTaGTCAGCCAGGAGGGGGCGCTCTCGCTGTAGATCC +
Preference number: 6 (lower is better)
Translates to: CPPRVAFFGCHL*SARRGRSRCRS
Trigger: GGATCTACAGCGAGAGCGCCCCCTCCTGGCTGAGCAAAGATGACATCCGAAGAATGCGACTCTTGGCGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CCA 72 bp CTGACTTCAGCTGCCGCGTCCGCTTCGGGATATAAGTaGTCTCCAGTGGGCAGAGGTGGAAGGAAAGGGTTG +
Preference number: 6 (lower is better)
Translates to: LTSAAASASGYK*SPVGRGGRKGL
Trigger: CAACCCTTTCCTTCCACCTCTGCCCACTGGAGACCACTTATATCCCGAAGCGGACGCGGCAGCTGAAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 72 bp TTCACGGTGCCACGGATATTGGCCGGCTTGCTGCGCTaGGAGCGTAGGGTAATGTACACCACATTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: FTVPRILAGLLR*ERRVMYTTLGC
Trigger: GCAGCCCAATGTGGTGTACATTACCCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 72 bp TTTTTCCTGCGCTTGGGCTTCACGGTGCCACGGATATaGGCCGGCTTGCTGCGCTTGGAGCGTAGGGTAATG +
Preference number: 6 (lower is better)
Translates to: FFLRLGFTVPRI*AGLLRLERRVM
Trigger: CATTACCCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 90 bp GGGACGCACAGGGAGCAGATGAACCAGTTTATGAGCTGCCCCGGCTaGTCTGGACAGGTCATTTCTCTGCCGCATCCACATGTTGAACGG +
Preference number: 6 (lower is better)
Translates to: GTHREQMNQFMSCPG*SGQVISLPHPHVER
Trigger: CCGTTCAACATGTGGATGCGGCAGAGAAATGACCTGTCCAGACAAGCCGGGGCAGCTCATAAACTGGTTCATCTGCTCCCTGTGCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 90 bp ACTGCATGCTTTTTCCTGCGCTTGGGCTTCACGGTGCCACGGATATaGGCCGGCTTGCTGCGCTTGGAGCGTAGGGTAATGTACACCACA +
Preference number: 6 (lower is better)
Translates to: TACFFLRLGFTVPRI*AGLLRLERRVMYTT
Trigger: TGTGGTGTACATTACCCTACGCTCCAAGCGCAGCAAGCCGGCCAATATCCGTGGCACCGTGAAGCCCAAGCGCAGGAAAAAGCATGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 90 bp GCTTGGATGAACTCTGCTTTCCTGCTCACAGACGGCAGGGTCCTGTaGAGCCCCAGGATCCTGTCTAGGTGGAAGGCAAACACCTCACTC +
Preference number: 6 (lower is better)
Translates to: AWMNSAFLLTDGRVL*SPRILSRWKANTSL
Trigger: GAGTGAGGTGTTTGCCTTCCACCTAGACAGGATCCTGGGGCTCAACAGGACCCTGCCGTCTGTGAGCAGGAAAGCAGAGTTCATCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393807.9
CDS CAA 90 bp CCTTGGATGAACTCTGCTTTCCTGCTCACAGACGGCAGGGTCCTGTaGAGCCCCAGGATCCTGTCTAGGTGGAAGGCAAACACCTCACTC +
Preference number: 6 (lower is better)
Translates to: PWMNSAFLLTDGRVL*SPRILSRWKANTSL
Trigger: GAGTGAGGTGTTTGCCTTCCACCTAGACAGGATCCTGGGGCTCAACAGGACCCTGCCGTCTGTGAGCAGGAAAGCAGAGTTCATCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS GCA 72 bp AATCTTAACCAGGTTTGCTCCCTGAGCGTACCCAGGTaGTACAGCATCAGCTTCCCTTGCCGCTTCCTGCGG +
Preference number: 6 (lower is better)
Translates to: NLNQVCSLSVPR*YSISFPCRFLR
Trigger: CCGCAGGAAGCGGCAAGGGAAGCTGATGCTGTAGCACCTGGGTACGCTCAGGGAGCAAACCTGGTTAAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp CAACCTCCAGGGTCGCTCTCCAATCTTAACCAGGTTTaGTCCCTGAGCGTACCCAGGTGCTACAGCATCAGC +
Preference number: 6 (lower is better)
Translates to: QPPGSLSNLNQV*SLSVPRCYSIS
Trigger: GCTGATGCTGTAGCACCTGGGTACGCTCAGGGAGCAAACCTGGTTAAGATTGGAGAGCGACCCTGGAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 72 bp TTGCTGCGCTTGGAGCGTAGGGTAATGTACACCACATaGGGCTGCAGAGTGGACCCATTGCCCTGGGACTCT +
Preference number: 6 (lower is better)
Translates to: LLRLERRVMYTT*GCRVDPLPWDS
Trigger: AGAGTCCCAGGGCAATGGGTCCACTCTGCAGCCCAATGTGGTGTACATTACCCTACGCTCCAAGCGCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 90 bp TCTTGGATGAACTCTGCTTTCCTGCTCACAGACGGCAGGGTCCTGTaGAGCCCCAGGATCCTGTCTAGGTGGAAGGCAAACACCTCACTC +
Preference number: 6 (lower is better)
Translates to: SWMNSAFLLTDGRVL*SPRILSRWKANTSL
Trigger: GAGTGAGGTGTTTGCCTTCCACCTAGACAGGATCCTGGGGCTCAACAGGACCCTGCCGTCTGTGAGCAGGAAAGCAGAGTTCATCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296530.12
ENST00000585682.6
CDS TCA 72 bp CAGGGTCGCTCTCCAATCTTAACCAGGTTTGCTCCCTaGGCGTACCCAGGTGCTACAGCATCAGCTTCCCTT +
Preference number: 6 (lower is better)
Translates to: QGRSPILTRFAP*AYPGATASASL
Trigger: AAGGGAAGCTGATGCTGTAGCACCTGGGTACGCTCAGGGAGCAAACCTGGTTAAGATTGGAGAGCGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 72 bp AGGGAGCAGATGAACCAGTTTATGAGCTGCCCCGGCTaGTCTGGACAGGTCATTTCTCTGCCGCATCCACAT +
Preference number: 6 (lower is better)
Translates to: REQMNQFMSCPG*SGQVISLPHPH
Trigger: ATGTGGATGCGGCAGAGAAATGACCTGTCCAGACAAGCCGGGGCAGCTCATAAACTGGTTCATCTGCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS GCA 72 bp GAATGCCAAGCGCATGGAAAGACACGCTGCTGCTGCTaGTGTCCAAATGTGAACCGTGGGTGGAGAAAAATC +
Preference number: 6 (lower is better)
Translates to: ECQAHGKTRCCC*CPNVNRGWRKI
Trigger: GATTTTTCTCCACCCACGGTTCACATTTGGACAGCAGCAGCAGCAGCGTGTCTTTCCATGCGCTTGGCATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS CAA 72 bp GCATGGGCGGCCATCTTACCATCTTGGCCGTTTCATTaGTCTTCCACCAGTTCTGGAAAGAGAAGGCCTAGA +
Preference number: 6 (lower is better)
Translates to: AWAAILPSWPFH*SSTSSGKRRPR
Trigger: TCTAGGCCTTCTCTTTCCAGAACTGGTGGAAGACAAATGAAACGGCCAAGATGGTAAGATGGCCGCCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589306.1
CDS TCA 72 bp GTCTGGACAGGTCATTTCTCTGCCGCATCCACATGTTaGACGGAGTTTAAAGTCTGCAGTTGGCTCCTGCTA +
Preference number: 6 (lower is better)
Translates to: VWTGHFSAASTC*TEFKVCSWLLL
Trigger: TAGCAGGAGCCAACTGCAGACTTTAAACTCCGTTCAACATGTGGATGCGGCAGAGAAATGACCTGTCCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000587787.1
ENST00000592057.1
CDS TCA 72 bp TGGGGCATGGGCGGCCATCCTGAAGTGTTTCAGAGATaGGAAGCATTCATCTCTCCACATTCAGGTTTGTCA +
Preference number: 6 (lower is better)
Translates to: WGMGGHPEVFQR*EAFISPHSGLS
Trigger: TGACAAACCTGAATGTGGAGAGATGAATGCTTCTCATCTCTGAAACACTTCAGGATGGCCGCCCATGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590648.5
CDS GCA 72 bp AACGAAGCATGTGAATCTGTTACCTTGGATGAACTCTaGTTTCCTGCTCACAGACGGCAGGGTCCTGTTGAG +
Preference number: 6 (lower is better)
Translates to: NEACESVTLDEL*FPAHRRQGPVE
Trigger: CTCAACAGGACCCTGCCGTCTGTGAGCAGGAAAGCAGAGTTCATCCAAGGTAACAGATTCACATGCTTCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS CAA 72 bp TGTGTGCTAGAGCCGCAGAACCTTGGTCATCACATTTaGGCCTCAATCCATTCTGTACACAGGCATCTTCCT +
Preference number: 6 (lower is better)
Translates to: CVLEPQNLGHHI*ASIHSVHRHLP
Trigger: AGGAAGATGCCTGTGTACAGAATGGATTGAGGCCAAAATGTGATGACCAAGGTTCTGCGGCTCTAGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS CAA 72 bp GCTTCGGGATATAAGTGGTCATCTTGGCCGTTTCATTaGTCTTCCACCAGTTCTGGAAAGAGAAGGCCTAGA +
Preference number: 6 (lower is better)
Translates to: ASGYKWSSWPFH*SSTSSGKRRPR
Trigger: TCTAGGCCTTCTCTTTCCAGAACTGGTGGAAGACAAATGAAACGGCCAAGATGACCACTTATATCCCGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587787.1
CDS CAA 72 bp ACAGCTGCAAATAACGAAGCATGTGAATCTGTTACCTaGGATGAACTCTGCTTTCCTGCTCACAGACGGCAG +
Preference number: 6 (lower is better)
Translates to: TAANNEACESVT*DELCFPAHRRQ
Trigger: CTGCCGTCTGTGAGCAGGAAAGCAGAGTTCATCCAAGGTAACAGATTCACATGCTTCGTTATTTGCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592057.1
CDS GCA 72 bp CCCTTGTTGTCTATAAAAACCAAATGCCTTGGGTCATaGTTTCGCTGGATAATGTGTGCTAGAGCCGCAGAA +
Preference number: 6 (lower is better)
Translates to: PLLSIKTKCLGS*FRWIMCARAAE
Trigger: TTCTGCGGCTCTAGCACACATTATCCAGCGAAAGCATGACCCAAGGCATTTGGTTTTTATAGACAACAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS CCA 72 bp CATGATGATGTATTTCAGTACAACCCGATTCAGGCTTaGGTACTCGGCCATTCTGCCAGCATTTCTGTTTCA +
Preference number: 6 (lower is better)
Translates to: HDDVFQYNPIQA*VLGHSASISVS
Trigger: TGAAACAGAAATGCTGGCAGAATGGCCGAGTACCCAAGCCTGAATCGGGTTGTACTGAAATACATCATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS CCA 72 bp TTTCGCTGGATAATGTGTGCTAGAGCCGCAGAACCTTaGTCATCACATTTTGGCCTCAATCCATTCTGTACA +
Preference number: 6 (lower is better)
Translates to: FRWIMCARAAEP*SSHFGLNPFCT
Trigger: TGTACAGAATGGATTGAGGCCAAAATGTGATGACCAAGGTTCTGCGGCTCTAGCACACATTATCCAGCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS CCA 72 bp TCTATAAAAACCAAATGCCTTGGGTCATGCTTTCGCTaGATAATGTGTGCTAGAGCCGCAGAACCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: SIKTKCLGSCFR*IMCARAAEPWS
Trigger: TGACCAAGGTTCTGCGGCTCTAGCACACATTATCCAGCGAAAGCATGACCCAAGGCATTTGGTTTTTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS CAA 72 bp AATGCGGCTTGTTTCTTACCATCTTGGCCGTTTCATTaGTCTTCCACCAGTTCTGGAAAGAGAAGGCCTAGA +
Preference number: 6 (lower is better)
Translates to: NAACFLPSWPFH*SSTSSGKRRPR
Trigger: TCTAGGCCTTCTCTTTCCAGAACTGGTGGAAGACAAATGAAACGGCCAAGATGGTAAGAAACAAGCCGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393807.9
ENST00000585682.6
ENST00000592057.1
CDS CAA 72 bp TTTGGCCTCAATCCATTCTGTACACAGGCATCTTCCTaGCGAGGTCTGAATCCACAGCAATTTGTATCTAAG +
Preference number: 6 (lower is better)
Translates to: FGLNPFCTQASS*RGLNPQQFVSK
Trigger: CTTAGATACAAATTGCTGTGGATTCAGACCTCGCAAGGAAGATGCCTGTGTACAGAATGGATTGAGGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS TCA 72 bp ATCCATTCTGTACACAGGCATCTTCCTTGCGAGGTCTaGATCCACAGCAATTTGTATCTAAGCGATTATAAA +
Preference number: 6 (lower is better)
Translates to: IHSVHRHLPCEV*IHSNLYLSDYK
Trigger: TTTATAATCGCTTAGATACAAATTGCTGTGGATTCAGACCTCGCAAGGAAGATGCCTGTGTACAGAATGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6
ENST00000589306.1
ENST00000590648.5
ENST00000592586.1
ENST00000593260.1
CDS TCA 72 bp GAAGCATTCATCTCTCCACATTCAGGTTTGTCAAAATaGTGCAGTACTGGACTCTCTAGAGAAATCTCAACA +
Preference number: 6 (lower is better)
Translates to: EAFISPHSGLSK*CSTGLSREIST
Trigger: TGTTGAGATTTCTCTAGAGAGTCCAGTACTGCATCATTTTGACAAACCTGAATGTGGAGAGATGAATGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590648.5
CDS CAA 72 bp TACATCGATAAGCTTTTCAATTCCTTGTCTACCTCCTaGACTTTCCCAATACACTTTATCAAGAAACAGAGA +
Preference number: 6 (lower is better)
Translates to: YIDKLFNSLSTS*TFPIHFIKKQR
Trigger: TCTCTGTTTCTTGATAAAGTGTATTGGGAAAGTCAAGGAGGTAGACAAGGAATTGAAAAGCTTATCGATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296530.12
ENST00000393807.9
ENST00000585682.6