Pregenerated sensors for GAR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000109534

Ensembl transcript IDs: ENST00000503671.2, ENST00000506840.5

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GGTCTCGTGAGCGCCGACCGACCACACACCACCCTTGCCGCCCCATaGTTAGTATCTCCTCCCCCTACAGACAGCAAGGTCTTCGCACCG	+
Preference number: 5 (lower is better) Translates to: GLVSADRPHTTLAAP*LVSPPPTDSKVFAP Trigger: CGGTGCGAAGACCTTGCTGTCTGTAGGGGGAGGAGATACTAATCATGGGGCGGCAAGGGTGGTGTGTGGTCGGTCGGCGCTCACGAGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503671.2
CDS GCA 90 bp	ACTTCTCCATGGTCTCGTGAGCGCCGACCGACCACACACCACCCTTaGCGCCCCATGATTAGTATCTCCTCCCCCTACAGACAGCAAGGT	+
Preference number: 5 (lower is better) Translates to: TSPWSRERRPTTHHP*RPMISISSPYRQQG Trigger: ACCTTGCTGTCTGTAGGGGGAGGAGATACTAATCATGGGGCGGCAAGGGTGGTGTGTGGTCGGTCGGCGCTCACGAGACCATGGAGAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503671.2
CDS CCA 90 bp	AGACATTCTCTCTCCTCCCTGATGGGTGAAGAGTTTACTTCTCCATaGTCTCGTGAGCGCCGACCGACCACACACCACCCTTGCCGCCCC	+
Preference number: 5 (lower is better) Translates to: RHSLSSLMGEEFTSP*SRERRPTTHHPCRP Trigger: GGGGCGGCAAGGGTGGTGTGTGGTCGGTCGGCGCTCACGAGACCATGGAGAAGTAAACTCTTCACCCATCAGGGAGGAGAGAGAATGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503671.2
CDS GCA 90 bp	ACAGTTAATTTCATTAGAAATTTTCCCCAAGTAACTTACCGCCTCTaGCACCACCTCTGCCACCTCCTCCTCTTCCTCCTCCTCGGCCTC	+
Preference number: 5 (lower is better) Translates to: TVNFIRNFPQVTYRL*HHLCHLLLFLLLGL Trigger: GAGGCCGAGGAGGAGGAAGAGGAGGAGGTGGCAGAGGTGGTGGCAGAGGCGGTAAGTTACTTGGGGAAAATTTCTAATGAAATTAACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506840.5
CDS TCA 72 bp	AGCGCCGACCGACCACACACCACCCTTGCCGCCCCATaGTTAGTATCTCCTCCCCCTACAGACAGCAAGGTC	+
Preference number: 6 (lower is better) Translates to: SADRPHTTLAAP*LVSPPPTDSKV Trigger: GACCTTGCTGTCTGTAGGGGGAGGAGATACTAATCATGGGGCGGCAAGGGTGGTGTGTGGTCGGTCGGCGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503671.2
CDS GCA 72 bp	TGGTCTCGTGAGCGCCGACCGACCACACACCACCCTTaGCGCCCCATGATTAGTATCTCCTCCCCCTACAGA	+
Preference number: 6 (lower is better) Translates to: WSRERRPTTHHP*RPMISISSPYR Trigger: TCTGTAGGGGGAGGAGATACTAATCATGGGGCGGCAAGGGTGGTGTGTGGTCGGTCGGCGCTCACGAGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503671.2
CDS CCA 72 bp	CTCTCCTCCCTGATGGGTGAAGAGTTTACTTCTCCATaGTCTCGTGAGCGCCGACCGACCACACACCACCCT	+
Preference number: 6 (lower is better) Translates to: LSSLMGEEFTSP*SRERRPTTHHP Trigger: AGGGTGGTGTGTGGTCGGTCGGCGCTCACGAGACCATGGAGAAGTAAACTCTTCACCCATCAGGGAGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503671.2
CDS CCA 72 bp	CTCACTTTTTCAGGAAACACTACAGACTTAAAAAGCTaGTGGCACTACAAAGCTTCTCATGGCAACCTGTAT	+
Preference number: 6 (lower is better) Translates to: LTFSGNTTDLKS*WHYKASHGNLY Trigger: ATACAGGTTGCCATGAGAAGCTTTGTAGTGCCACCAGCTTTTTAAGTCTGTAGTGTTTCCTGAAAAAGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000503671.2

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