RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GABRA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000022355

Ensembl transcript IDs: ENST00000023897.10, ENST00000393943.10, ENST00000428797.7, ENST00000437025.6, ENST00000519621.2, ENST00000521339.5, ENST00000522651.6, ENST00000634335.1, ENST00000635096.1, ENST00000635880.1, ENST00000635916.2, ENST00000636340.1, ENST00000636573.1, ENST00000637044.1, ENST00000637827.1, ENST00000638112.1, ENST00000638159.1

Found 821 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTaGTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATGAATTA +
Preference number: 1 (lower is better)
Translates to: RLLCQNPVSKLHSLL*SRLPDRGLLFLNEL
Trigger: TAATTCATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
3UTR CCA 90 bp GACTGGACAATTCCAGAGTCTACTGTTTGTCCAAGAAGGTCATACTaGTTTAGACGTGATCCATCTTCTGCTACAACCACTGAGCGTGCT +
Preference number: 1 (lower is better)
Translates to: DWTIPESTVCPRRSY*FRRDPSSATTTERA
Trigger: AGCACGCTCAGTGGTTGTAGCAGAAGATGGATCACGTCTAAACCAGTATGACCTTCTTGGACAAACAGTAGACTCTGGAATTGTCCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR CCA 90 bp GACGTGATCCATCTTCTGCTACAACCACTGAGCGTGCTGGCTCTCTaGTCCATTCATAAACAACTTCTGCTCTTGTATAAGCATAACTTC +
Preference number: 1 (lower is better)
Translates to: DVIHLLLQPLSVLAL*SIHKQLLLLYKHNF
Trigger: GAAGTTATGCTTATACAAGAGCAGAAGTTGTTTATGAATGGACCAGAGAGCCAGCACGCTCAGTGGTTGTAGCAGAAGATGGATCACGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR CCA 90 bp TTGGATAGCAGCTTTTTGAGAAAAACATTGCTCAAGACTTGGGTTTaGATCCCAACTGTCTTATTTGGCAATAATGCTAACAGATTTATG +
Preference number: 1 (lower is better)
Translates to: LDSSFLRKTLLKTWV*IPTVLFGNNANRFM
Trigger: CATAAATCTGTTAGCATTATTGCCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR TCA 90 bp GCAATCATTTATACAGTAGAATACTATCCACATATACTAACAAACTaGGAAATGATAGAAATGCAGTCATTGCGTAGCAGGAAGCAGACT +
Preference number: 1 (lower is better)
Translates to: AIIYTVEYYPHILTN*EMIEMQSLRSRKQT
Trigger: AGTCTGCTTCCTGCTACGCAATGACTGCATTTCTATCATTTCTCAGTTTGTTAGTATATGTGGATAGTATTCTACTGTATAAATGATTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR TCA 90 bp GGCCAAATTAGGGGTGTAGCTGGTTGCTGTTGGAGCGTAAGTGTTGTTTTTCTTAGGTGCCATCCTCTGTaGTCCGCAGGAGTTTGTTGG +
Preference number: 2 (lower is better)
Translates to: GQIRGVAGCCWSVSVVFLRCHPL*SAGVCW
Trigger: CCAACAAACTCCTGCGGATCACAGAGGATGGCACCT...AAGAAAAACAACACTTACGCTCCAACAGCAACCAGCTACACCCCTAATTTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR GCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTTGCTTTGCTCCAGACTaGCAGACAGGGGTCTCTTGT +
Preference number: 2 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPCFAPD*QTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCA...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
3UTR CAA 90 bp TTCTCTCTCATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTaGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGC +
Preference number: 2 (lower is better)
Translates to: FSLILSPSDMTLLFR*LCQNPVSKLHSLLC
Trigger: GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAATGAGAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
3UTR-3UTR TCA 90 bp GGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGTTGCACTTTGTCTCCTTCTGACATaGCTTTGCTCTTTCGCTTGC +
Preference number: 2 (lower is better)
Translates to: GSGGFVSGLTSLGSMVALCLLLT*LCSFAC
Trigger: GCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACA...AAGTGCAACCATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR GCA 90 bp GTTTTCTTGGGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGGGAAGTCCTCCAAATaGATCGGACATTCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: VFLGSGGFVSGLTSLGSMGKSSK*IGHSAL
Trigger: GAGAGCTGAATGTCCGATGCATTTGGAGGACTTCCC...CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CCA 90 bp GTTTGTCCAAGAAGGTCATACTGGTTTAGACGTGATCCATCTTCTGCTACAACCTCACTGTCAGCCTCATaGTGTACAGCAAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: VCPRRSYWFRRDPSSATTSLSAS*CTARCH
Trigger: ATGGCACCTTGCTGTACACCATGAGGCTGACAGTGA...GGTTGTAGCAGAAGATGGATCACGTCTAAACCAGTATGACCTTCTTGGACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CCA 90 bp CTTTGGCTTTTCTGGAACCACACTTTTGCCATCCCATGCATAACCTCTCTTAGTTTTAGTGGGCAAGCATaGGCATCCATAGGGAAGTCC +
Preference number: 2 (lower is better)
Translates to: LWLFWNHTFAIPCITSLSFSGQA*ASIGKS
Trigger: GGACTTCCCTATGGATGCCCATGCTTGCCCACTAAA...ACTAAGAGAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAGAAAAGCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR TCA 90 bp GGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGTTGCACTTCATTCTGTCTCCTTCTaGCATGACTTTGCTCTTTCG +
Preference number: 2 (lower is better)
Translates to: GSGGFVSGLTSLGSMVALHSVSF*HDFALS
Trigger: CGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAATG...AAGTGCAACCATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR GCA 90 bp ACATATTCTCCTGTACTTGACTGGACAATTCCAGAGTCTACTGTTTGTCCAAGACCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAG +
Preference number: 2 (lower is better)
Translates to: TYSPVLDWTIPESTVCPRPSCIV*FAPDCQ
Trigger: CTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG...TCTTGGACAAACAGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR GCA 90 bp GGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGTTGCACTTCTTTGCTCTTTCGCTTaGTCTGTCAGAATCCTGTCT +
Preference number: 2 (lower is better)
Translates to: GSGGFVSGLTSLGSMVALLCSFA*SVRILS
Trigger: AGACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAG...AAGTGCAACCATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGGTATATTCCATATCATaGTCTGAAACGGGTCCGAAA +
Preference number: 2 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLVYSIS*SETGPK
Trigger: TTTCGGACCCGTTTCAGACCATGATATGGAATATAC...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636340.1
3UTR-3UTR CCA 90 bp GGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGTTGCACTTAGCGTGCTGGCTCTCTaGTCCATTCATAAACAACTT +
Preference number: 2 (lower is better)
Translates to: GSGGFVSGLTSLGSMVALSVLAL*SIHKQL
Trigger: AAGTTGTTTATGAATGGACCAGAGAGCCAGCACGCT...AAGTGCAACCATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR TCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCATCCTTCCAGCTTTaGCGGAAAAATACATCTATT +
Preference number: 2 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCSSFQL*RKNTSI
Trigger: AATAGATGTATTTTTCCGTCAAAGCTGGAAGGATGA...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR TCA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTTTCTGCTACAACCACTaGGCGTGCTGGCTCTCTGGT +
Preference number: 2 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSFCYNH*ACWLSG
Trigger: ACCAGAGAGCCAGCACGCTCAGTGGTTGTAGCAGAA...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637044.1
3UTR-3UTR GCA 90 bp GTTTTCTTGGGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGCTTTGCTCTTTCGCTTaGTCTGTCAGAATCCTGTCT +
Preference number: 2 (lower is better)
Translates to: VFLGSGGFVSGLTSLGSMLCSFA*SVRILS
Trigger: AGACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAG...CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR TCA 90 bp GTTTTCTTGGGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGCCAGAAGGAGACTTGTaGGAGAATCACTGTCATTAT +
Preference number: 2 (lower is better)
Translates to: VFLGSGGFVSGLTSLGSMPEGDL*ENHCHY
Trigger: ATAATGACAGTGATTCTCTCACAAGTCTCCTTCTGG...CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR GCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTTGCTTTGCTCCAGACTaGCAGACAGGGGTCTCTTGT +
Preference number: 2 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFCFAPD*QTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCA...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
3UTR-3UTR GCA 90 bp ACATATTCTCCTGTACTTGACTGGACAATTCCAGAGTCTACTGTTTGTCCAAGAATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: TYSPVLDWTIPESTVCPRILSPS*IVCFAP
Trigger: TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGAT...TCTTGGACAAACAGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTTCTCCTGTACTTGACTaGACAATTCCAGAGTCTACT +
Preference number: 2 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPSPVLD*TIPEST
Trigger: AGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGA...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR CAA 90 bp ATTCCAAATAGCAGCGGGAAGGCTATTCTTGACAGTCGGTCAATTTaGCTGACACTGTTAAAGGTTTTCTTGGGTTCTGGTGGTTTTGTT +
Preference number: 2 (lower is better)
Translates to: IPNSSGKAILDSRSI*LTLLKVFLGSGGFV
Trigger: AACAAAACCACCAGAACCCAAGAAAACCTTTAACAGTGTCAGCAAAATTGACCGACTGTCAAGAATAGCCTTCCCGCTGCTATTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR TCA 90 bp GGCCAAATTAGGGGTGTAGCTGGTTGCTGTTGGAGCGTAAGTGTTGTTTTTCTTTTTTTCTTGTATCTTTaGACCATCTTCCCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: GQIRGVAGCCWSVSVVFLFFLYL*TIFPLF
Trigger: AAAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAA...AAGAAAAACAACACTTACGCTCCAACAGCAACCAGCTACACCCCTAATTTGGCC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR GCA 90 bp AATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATCTATTCTGCATAGTCTGCTTTaGTCCAGACTGCCAGACAGG +
Preference number: 2 (lower is better)
Translates to: NKFPVQRTEQQNVSKRSILHSLL*SRLPDR
Trigger: CCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG...AATAGATCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR GCA 90 bp GGCCAAATTAGGGGTGTAGCTGGTTGCTGTTGGAGCGTAAGTGTTGTTTTTCTTTCTACAATGAGCAACTaGACCTTTACGTATGAAAGT +
Preference number: 2 (lower is better)
Translates to: GQIRGVAGCCWSVSVVFLSTMSN*TFTYES
Trigger: ACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGA...AAGAAAAACAACACTTACGCTCCAACAGCAACCAGCTACACCCCTAATTTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR TCA 90 bp AATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATCTATTCGGGTCCGAAACTGGTaGCGAAGATATCAGTCTTCA +
Preference number: 2 (lower is better)
Translates to: NKFPVQRTEQQNVSKRSIRVRNW*RRYQSS
Trigger: TGAAGACTGATATCTTCGTCACCAGTTTCGGACCCG...AATAGATCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636340.1
3UTR-3UTR GCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGCTTTGCTCTTTCGCTTaGTCTGTCAGAATCCTGTCT +
Preference number: 2 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWLCSFA*SVRILS
Trigger: AGACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAG...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR GCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTTCTACAATGAGCAACTaGACCTTTACGTATGAAAGT +
Preference number: 2 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPSTMSN*TFTYES
Trigger: ACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGA...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
3UTR-3UTR GCA 90 bp GTTTTCTTGGGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGTCTACAATGAGCAACTaGACCTTTACGTATGAAAGT +
Preference number: 2 (lower is better)
Translates to: VFLGSGGFVSGLTSLGSMSTMSN*TFTYES
Trigger: ACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGA...CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR GCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTGAATCACTGTCATTATaGATGGCAGGTATGTTTGAA +
Preference number: 2 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPESLSL*MAGMFE
Trigger: TTCAAACATACCTGCCATGCATAATGACAGTGATTC...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CCA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCAGCGTGCTGGCTCTCTaGTCCATTCATAAACAACTT +
Preference number: 2 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCSVLAL*SIHKQL
Trigger: AAGTTGTTTATGAATGGACCAGAGAGCCAGCACGCT...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637044.1
3UTR-3UTR TCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACAAATGTGCTCTACAATaGGCAACTGCACCTTTACGT +
Preference number: 2 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNKCALQ*ATAPLR
Trigger: ACGTAAAGGTGCAGTTGCTCATTGTAGAGCACATTT...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR TCA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCAAATGTGCTCTACAATaGGCAACTGCACCTTTACGT +
Preference number: 2 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCKCALQ*ATAPLR
Trigger: ACGTAAAGGTGCAGTTGCTCATTGTAGAGCACATTT...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGGAATTAAGTGAGTGTTaGGCTCATGTGCTATCTGAA +
Preference number: 2 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWELSEC*AHVLSE
Trigger: TTCAGATAGCACATGAGCCCAACACTCACTTAATTC...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR TCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGTTTTTCTTGTATCTTTaGACCATCTTCCCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWFFLYL*TIFPLF
Trigger: AAAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAA...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR TCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGTGGATAGCAGCTTTTTaGGAAAAACATTGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWWIAAF*EKHCSR
Trigger: TCTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCA...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR GCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGTCTACAATGAGCAACTaGACCTTTACGTATGAAAGT +
Preference number: 2 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWSTMSN*TFTYES
Trigger: ACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGA...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACCTCAAGACTTGGGTTTaGATCCCAACTGTCTTATTT +
Preference number: 2 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNLKTWV*IPTVLF
Trigger: AAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAG...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CCA 90 bp AATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATCTATTCCAAGAAGGTCATACTaGTTTAGACGTGATCCATCT +
Preference number: 2 (lower is better)
Translates to: NKFPVQRTEQQNVSKRSIPRRSY*FRRDPS
Trigger: AGATGGATCACGTCTAAACCAGTATGACCTTCTTGG...AATAGATCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGATCCTTTACTTTCTTTaGCTTTTCTGGAACCACACT +
Preference number: 2 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWILYFL*LFWNHT
Trigger: AGTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGAT...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637044.1
3UTR-3UTR TCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACTTTTTCTTGTATCTTTaGACCATCTTCCCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNFFLYL*TIFPLF
Trigger: AAAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAA...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR GCA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTCATGTTAGGTTTTATTaGCACTTCACTGCACTAAAG +
Preference number: 2 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSHVRFY*HFTALK
Trigger: CTTTAGTGCAGTGAAGTGGCAATAAAACCTAACATG...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CCA 90 bp AATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATCTATTGAATTAAGTGAGTGTTaGGCTCATGTGCTATCTGAA +
Preference number: 2 (lower is better)
Translates to: NKFPVQRTEQQNVSKRSIELSEC*AHVLSE
Trigger: TTCAGATAGCACATGAGCCCAACACTCACTTAATTC...AATAGATCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637044.1
3UTR-3UTR CCA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTTTAGACCGTGACTTGTaGATTCTGAGCACTAAATTT +
Preference number: 2 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSLDRDL*ILSTKF
Trigger: AAATTTAGTGCTCAGAATCCACAAGTCACGGTCTAA...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR GCA 72 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGT +
Preference number: 3 (lower is better)
Translates to: CSVRILSPSCIV*FAPDCQTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
3UTR GCA 72 bp TCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCAGACTGCCAGACAGGG +
Preference number: 3 (lower is better)
Translates to: SFACSVRILSPS*IVCFAPDCQTG
Trigger: CCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
3UTR GCA 72 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTaGTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTA +
Preference number: 3 (lower is better)
Translates to: CQNPVSKLHSLL*SRLPDRGLLFL
Trigger: TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
3UTR-3UTR CAA 90 bp CTTGGGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGTTGCTTGGGCATGGTCATGTaGTGGGCCACTGACTTCTTT +
Preference number: 3 (lower is better)
Translates to: LGFWWFCFGLDLFRFYGCLGMVM*WATDFF
Trigger: AAAGAAGTCAGTGGCCCACAACATGACCATGCCCAA...GCAACCATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CAA 90 bp GGCCAAATTAGGGGTGTAGCTGGTTGCTGTTGGAGCGTAAGTGTTGTTTTTCTTACTTTGCTCTTTCGCTaGCTCTGTCAGAATCCTGTC +
Preference number: 3 (lower is better)
Translates to: GQIRGVAGCCWSVSVVFLTLLFR*LCQNPV
Trigger: GACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAGT...AAGAAAAACAACACTTACGCTCCAACAGCAACCAGCTACACCCCTAATTTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CAA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTACTTTGCTCTTTCGCTaGCTCTGTCAGAATCCTGTC +
Preference number: 3 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPTLLFR*LCQNPV
Trigger: GACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAGT...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
3UTR CCA 72 bp CATCTTCTGCTACAACCACTGAGCGTGCTGGCTCTCTaGTCCATTCATAAACAACTTCTGCTCTTGTATAAG +
Preference number: 3 (lower is better)
Translates to: HLLLQPLSVLAL*SIHKQLLLLYK
Trigger: CTTATACAAGAGCAGAAGTTGTTTATGAATGGACCAGAGAGCCAGCACGCTCAGTGGTTGTAGCAGAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CAA 90 bp GGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGTTGCACTTCTTTTTCTTGTATCTTaGAACCATCTTCCCCCTCTT +
Preference number: 3 (lower is better)
Translates to: GSGGFVSGLTSLGSMVALLFLVS*NHLPPL
Trigger: AAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAAG...AAGTGCAACCATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CAA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTACTGACTTCTTTCCATaGTGGAAAAATGTGTCCGGA +
Preference number: 3 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPTDFFP*WKNVSG
Trigger: TCCGGACACATTTTTCCACAATGGAAAGAAGTCAGT...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CAA 90 bp GTTTTCTTGGGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGATCCTTTACTTTCTTaGGCTTTTCTGGAACCACAC +
Preference number: 3 (lower is better)
Translates to: VFLGSGGFVSGLTSLGSMDPLLS*AFLEPH
Trigger: GTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGATC...CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CAA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTGACAGTCGGTCAATTTaGCTGACACTGTTAAAGGTT +
Preference number: 3 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPDSRSI*LTLLKV
Trigger: AACCTTTAACAGTGTCAGCAAAATTGACCGACTGTC...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR GCA 72 bp CTTTGGCTTTTCTGGAACCACACTTTTGCCATCCCATaGATAACCTCTCTTAGTGAAATAGTTTACTGTGGC +
Preference number: 3 (lower is better)
Translates to: LWLFWNHTFAIP*ITSLSEIVYCG
Trigger: GCCACAGTAAACTATTTCACTAAGAGAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAGAAAAGCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR CCA 72 bp ATTCCAGAGTCTACTGTTTGTCCAAGAAGGTCATACTaGTTTAGACGTGATCCATCTTCTGCTACAACCACT +
Preference number: 3 (lower is better)
Translates to: IPESTVCPRRSY*FRRDPSSATTT
Trigger: AGTGGTTGTAGCAGAAGATGGATCACGTCTAAACCAGTATGACCTTCTTGGACAAACAGTAGACTCTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR TCA 72 bp ATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTaGGTAAAAGATCTATTGATGTGGTGTGGGGGCTTT +
Preference number: 3 (lower is better)
Translates to: INSQCRGLNNRM*VKDLLMWCGGF
Trigger: AAAGCCCCCACACCACATCAATAGATCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
3UTR-3UTR CAA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCCCTTCTGACATGACTTaGCTCTTTCGCTTGCTCTGT +
Preference number: 3 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCPSDMT*LFRLLC
Trigger: ACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGG...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CAA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGAACATTGCTCAAGACTaGGGTTTGGATCCCAACTGT +
Preference number: 3 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWNIAQD*GLDPNC
Trigger: ACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTT...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CAA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGATAGAAATGCAGTCATaGCGTAGCAGGAAGCAGACT +
Preference number: 3 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWIEMQS*RSRKQT
Trigger: AGTCTGCTTCCTGCTACGCAATGACTGCATTTCTAT...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CAA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGAATGTGTGGAATGACTaGAACAGAGAGCAACTGATC +
Preference number: 3 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWNVWND*NREQLI
Trigger: GATCAGTTGCTCTCTGTTCAAGTCATTCCACACATT...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CAA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTGCTCAAGACTTGGGTTaGGATCCCAACTGTCTTATT +
Preference number: 3 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSAQDLG*DPNCLI
Trigger: AATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGC...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CAA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTAATGTGTGGAATGACTaGAACAGAGAGCAACTGATC +
Preference number: 3 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSNVWND*NREQLI
Trigger: GATCAGTTGCTCTCTGTTCAAGTCATTCCACACATT...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CAA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACAATGTGTGGAATGACTaGAACAGAGAGCAACTGATC +
Preference number: 3 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNNVWND*NREQLI
Trigger: GATCAGTTGCTCTCTGTTCAAGTCATTCCACACATT...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CAA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACTGTTTAGACCGTGACTaGTGGATTCTGAGCACTAAA +
Preference number: 3 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNCLDRD*WILSTK
Trigger: TTTAGTGCTCAGAATCCACAAGTCACGGTCTAAACA...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CAA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCACTGACTTCTTTCCATaGTGGAAAAATGTGTCCGGA +
Preference number: 3 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCTDFFP*WKNVSG
Trigger: TCCGGACACATTTTTCCACAATGGAAAGAAGTCAGT...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637044.1
3UTR-3UTR CAA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTCTTTTTCTTGTATCTTaGAACCATCTTCCCCCTCTT +
Preference number: 3 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSLFLVS*NHLPPL
Trigger: AAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAAG...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR CCA 72 bp AGCTTTTTGAGAAAAACATTGCTCAAGACTTGGGTTTaGATCCCAACTGTCTTATTTGGCAATAATGCTAAC +
Preference number: 3 (lower is better)
Translates to: SFLRKTLLKTWV*IPTVLFGNNAN
Trigger: GTTAGCATTATTGCCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAAAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR-3UTR CAA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACTCCCAACTGTCTTATTaGGCAATAATGCTAACAGAT +
Preference number: 3 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNSQLSY*AIMLTD
Trigger: ATCTGTTAGCATTATTGCCAAATAAGACAGTTGGGA...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
3UTR CCA 72 bp CAACAGTTTGGAAATTATAAGTTTTGTCTACATAAGTaGACTTCACACCCATATGTTTTAAGTTCCATGTGG +
Preference number: 3 (lower is better)
Translates to: QQFGNYKFCLHK*TSHPYVLSSMW
Trigger: CCACATGGAACTTAAAACATATGGGTGTGAAGTCCACTTATGTAGACAAAACTTATAATTTCCAAACTGTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTGAGCCAGCGCGAGTCTaGGAGTCCGAGTCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCEPARV*ESESGR
Trigger: GCGCCCGGACTCGGACTCGCAGACTCGCGCTGGCTC...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR GCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCGAGCCAGCGCGAGTCTaGGAGTCCGAGTCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSEPARV*ESESGR
Trigger: GCGCCCGGACTCGGACTCGCAGACTCGCGCTGGCTC...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR GCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAGCCAGCGCGAGTCTaGGAGTCCGAGTCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPEPARV*ESESGR
Trigger: GCGCCCGGACTCGGACTCGCAGACTCGCGCTGGCTC...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR GCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTGAGCCAGCGCGAGTCTaGGAGTCCGAGTCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLEPARV*ESESGR
Trigger: GCGCCCGGACTCGGACTCGCAGACTCGCGCTGGCTC...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR GCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTGGGGCGTCCTCGCTCTaGCTCTCACTCACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSGASSL*LSLTWS
Trigger: AGACCAAGTGAGTGAGAGGCAGAGCGAGGACGCCCC...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTGGGGCGTCCTCGCTCTaGCTCTCACTCACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGGASSL*LSLTWS
Trigger: AGACCAAGTGAGTGAGAGGCAGAGCGAGGACGCCCC...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR GCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTGGGGCGTCCTCGCTCTaGCTCTCACTCACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCGASSL*LSLTWS
Trigger: AGACCAAGTGAGTGAGAGGCAGAGCGAGGACGCCCC...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTGAATCGTGGAGAGACTaGAGCCAGCGCGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSESWRD*SQRESA
Trigger: CGCAGACTCGCGCTGGCTCCAGTCTCTCCACGATTC...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTGAATCGTGGAGAGACTaGAGCCAGCGCGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGESWRD*SQRESA
Trigger: CGCAGACTCGCGCTGGCTCCAGTCTCTCCACGATTC...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTTCCTCATCGCGGGCTaGAGCAGCTGCTGTGGGATC +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDFLIAG*SSCCGI
Trigger: GATCCCACAGCAGCTGCTCCAGCCCGCGATGAGGAA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS-3UTR TCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTAGGTGCCATCCTCTGTaGTCCGCAGGAGTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGRCHPL*SAGVCW
Trigger: CCAACAAACTCCTGCGGATCACAGAGGATGGCACCT...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTTCTGCTACAACCACTaGGCGTGCTGGCTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCFCYNH*ACWLSG
Trigger: ACCAGAGAGCCAGCACGCTCAGTGGTTGTAGCAGAA...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTTTCTGCTACAACCACTaGGCGTGCTGGCTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGFCYNH*ACWLSG
Trigger: ACCAGAGAGCCAGCACGCTCAGTGGTTGTAGCAGAA...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTGGGAGAGAGAATCGTaGAGAGACTGGAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCWERES*RDWSQR
Trigger: GCGCTGGCTCCAGTCTCTCCACGATTCTCTCTCCCA...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000636340.1
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGATGGGAGAGAGAATCGTaGAGAGACTGGAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRWERES*RDWSQR
Trigger: GCGCTGGCTCCAGTCTCTCCACGATTCTCTCTCCCA...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000636340.1
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTTCCTCATCGCGGGCTaGAGCAGCTCATTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCFLIAG*SSSLEA
Trigger: TGCTTCCAATGAGCTGCTCCAGCCCGCGATGAGGAA...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS-3UTR TCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTTCTGCTACAACCACTaGGCGTGCTGGCTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCFCYNH*ACWLSG
Trigger: ACCAGAGAGCCAGCACGCTCAGTGGTTGTAGCAGAA...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAAGGCGCTGTTACCTCTaGATTGTGCTGGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRRRCYL*IVLGSW
Trigger: CCAGGAACCCAGCACAATTCAGAGGTAACAGCGCCT...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS-3UTR GCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTGGGGCGTCCTCGCTCTaGCTCTCACTCACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLGASSL*LSLTWS
Trigger: AGACCAAGTGAGTGAGAGGCAGAGCGAGGACGCCCC...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR GCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTGCTTTGCTCCAGACTaGCAGACAGGGGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSCFAPD*QTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCA...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTTGCTTTGCTCCAGACTaGCAGACAGGGGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGCFAPD*QTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCA...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTCTGCATAGTCTGCTTTaGTCCAGACTGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCLHSLL*SRLPDR
Trigger: CCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTGCATAGTCTGCTTTaGTCCAGACTGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGLHSLL*SRLPDR
Trigger: CCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGPSCIV*FAPDCQ
Trigger: CTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTCCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCPSCIV*FAPDCQ
Trigger: CTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTGGTCTGAGCCATCATaGACTCTGCGTGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSWSEPS*TLRAPL
Trigger: CAAAGGAGCACGCAGAGTCCATGATGGCTCAGACCA...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR CCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATGAATCGTGGAGAGACTaGAGCCAGCGCGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNESWRD*SQRESA
Trigger: CGCAGACTCGCGCTGGCTCCAGTCTCTCCACGATTC...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTGGGAGAGAGAATCGTaGAGAGACTGGAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCWERES*RDWSQR
Trigger: GCGCTGGCTCCAGTCTCTCCACGATTCTCTCTCCCA...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000636340.1
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATGGGAGAGAGAATCGTaGAGAGACTGGAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLWERES*RDWSQR
Trigger: GCGCTGGCTCCAGTCTCTCCACGATTCTCTCTCCCA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000636340.1
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGTGGGAGAGAGAATCGTaGAGAGACTGGAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLWERES*RDWSQR
Trigger: GCGCTGGCTCCAGTCTCTCCACGATTCTCTCTCCCA...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000636340.1
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSTVRQT*TFPHRG
Trigger: CCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGT...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTCGGGTCCGAAACTGGTaGCGAAGATATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSRVRNW*RRYQSS
Trigger: TGAAGACTGATATCTTCGTCACCAGTTTCGGACCCG...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCGGGTCCGAAACTGGTaGCGAAGATATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGRVRNW*RRYQSS
Trigger: TGAAGACTGATATCTTCGTCACCAGTTTCGGACCCG...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGAGGTGCCATCCTCTGTaGTCCGCAGGAGTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLRCHPL*SAGVCW
Trigger: CCAACAAACTCCTGCGGATCACAGAGGATGGCACCT...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGGTGCCATCCTCTGTaGTCCGCAGGAGTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSRCHPL*SAGVCW
Trigger: CCAACAAACTCCTGCGGATCACAGAGGATGGCACCT...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AAGATATCAGTCTTCACTTCGGTTACACGCTCTCCCAATCCTGGTCTCAGGCGAAGGTGCCATCCTCTGTaGTCCGCAGGAGTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: KISVFTSVTRSPNPGLRRRCHPL*SAGVCW
Trigger: CCAACAAACTCCTGCGGATCACAGAGGATGGCACCT...TCGCCTGAGACCAGGATTGGGAGAGCGTGTAACCGAAGTGAAGACTGATATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636340.1
CDS-3UTR TCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCAGGTGCCATCCTCTGTaGTCCGCAGGAGTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCRCHPL*SAGVCW
Trigger: CCAACAAACTCCTGCGGATCACAGAGGATGGCACCT...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCATTCTGCTACAACCACTaGGCGTGCTGGCTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPFCYNH*ACWLSG
Trigger: ACCAGAGAGCCAGCACGCTCAGTGGTTGTAGCAGAA...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTTCTGCTACAACCACTaGGCGTGCTGGCTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSFCYNH*ACWLSG
Trigger: ACCAGAGAGCCAGCACGCTCAGTGGTTGTAGCAGAA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTTCTTCCAGTCAGTGTaGTCAGAAGGAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSFFQSV*SEGGSR
Trigger: CCTGGATCCTCCTTCTGAGCACACTGACTGGAAGAA...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTTCTTCCAGTCAGTGTaGTCAGAAGGAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCFFQSV*SEGGSR
Trigger: CCTGGATCCTCCTTCTGAGCACACTGACTGGAAGAA...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTGGGAAGTCCTCCAAATaGATCGGACATTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGGKSSK*IGHSAL
Trigger: GAGAGCTGAATGTCCGATGCATTTGGAGGACTTCCC...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTGGGAAGTCCTCCAAATaGATCGGACATTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSGKSSK*IGHSAL
Trigger: GAGAGCTGAATGTCCGATGCATTTGGAGGACTTCCC...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTAGGGGTGTAGCTGGTTaGTGTTGGAGCGTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGRGVAG*CWSVSV
Trigger: AACACTTACGCTCCAACAGCAACCAGCTACACCCCT...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTGCTTTGCTCCAGACTaGCAGACAGGGGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCCFAPD*QTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCA...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGATGCTTTGCTCCAGACTaGCAGACAGGGGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRCFAPD*QTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCA...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTGCTTTGCTCCAGACTaGCAGACAGGGGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDCFAPD*QTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACCTGCATAGTCTGCTTTaGTCCAGACTGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDLHSLL*SRLPDR
Trigger: CCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTGGTCTGAGCCATCATaGACTCTGCGTGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCWSEPS*TLRAPL
Trigger: CAAAGGAGCACGCAGAGTCCATGATGGCTCAGACCA...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR CCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCGACCGGGGAAAAGTCTaGGAGAGAGAATCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCDRGKV*ERESWR
Trigger: TCTCCACGATTCTCTCTCCCAGACTTTTCCCCGGTC...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000636340.1
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRTVRQT*TFPHRG
Trigger: CCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGT...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCACTGTCAGCCTCATaGTGTACAGCAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCSLSAS*CTARCH
Trigger: ATGGCACCTTGCTGTACACCATGAGGCTGACAGTGA...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTTCCTCATCGCGGGCTaGAGCAGCCTGCGGAATACA +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLFLIAG*SSLRNT
Trigger: TGTATTCCGCAGGCTGCTCCAGCCCGCGATGAGGAA...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636573.1
CDS-3UTR TCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACGGGTCCGAAACTGGTaGCGAAGATATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRRVRNW*RRYQSS
Trigger: TGAAGACTGATATCTTCGTCACCAGTTTCGGACCCG...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCGGGTCCGAAACTGGTaGCGAAGATATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCRVRNW*RRYQSS
Trigger: TGAAGACTGATATCTTCGTCACCAGTTTCGGACCCG...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTTCCATATCATGGTCTaGAACGGGTCCGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCFHIMV*NGSETG
Trigger: ACCAGTTTCGGACCCGTTTCAGACCATGATATGGAA...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTAGGTGCCATCCTCTGTaGTCCGCAGGAGTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLRCHPL*SAGVCW
Trigger: CCAACAAACTCCTGCGGATCACAGAGGATGGCACCT...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATTTCTGCTACAACCACTaGGCGTGCTGGCTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNFCYNH*ACWLSG
Trigger: ACCAGAGAGCCAGCACGCTCAGTGGTTGTAGCAGAA...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTCGGGAAGGCTATTCTTaGCAGTCGGTCAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSREGYS*QSVNFA
Trigger: AGCAAAATTGACCGACTGTCAAGAATAGCCTTCCCG...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTGTGGGGGCTTTTAGCTaGGGCTCTCTGTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCVGAFS*GSLFKY
Trigger: GTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCAC...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTGTCTCCTTCTGACATaGCTTTGCTCTTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCCLLLT*LCSFAC
Trigger: GCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACA...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAATGAACGCAAGCTCTaGAACTGGGAGATGCAGGGT +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDNERKL*NWEMQG
Trigger: ACCCTGCATCTCCCAGTTTCAGAGCTTGCGTTCATT...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428797.7
CDS-3UTR TCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTACCAAGGAATCAGGGATaGCTTGGTTTCCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLPRNQG*LGFLLG
Trigger: TCCGAGGAGGAAACCAAGTCATCCCTGATTCCTTGG...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS-3UTR GCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTGCAGCTCTGAATTGTaGTGGGTTCCTGGACGAAGA +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDCSSEL*WVPGRR
Trigger: TCTTCGTCCAGGAACCCAGCACAATTCAGAGCTGCA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000023897.10
CDS-3UTR GCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTTCTTCCAGTCAGTGTaGTCAGAAGGAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDFFQSV*SEGGSR
Trigger: CCTGGATCCTCCTTCTGAGCACACTGACTGGAAGAA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCCAATCCATAGCTGTTaGATAAGCCACCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGPIHSC*ISHLRE
Trigger: CTCCCTAAGGTGGCTTATGCAACAGCTATGGATTGG...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTCCAATCCATAGCTGTTaGATAAGCCACCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCPIHSC*ISHLRE
Trigger: CTCCCTAAGGTGGCTTATGCAACAGCTATGGATTGG...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTGGAACCACACTTTTaGCATCCCATGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGLEPHF*HPMHNL
Trigger: GAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAG...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTCTGGAACCACACTTTTaGCATCCCATGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCLEPHF*HPMHNL
Trigger: GAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAG...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCAGGGGTGTAGCTGGTTaGTGTTGGAGCGTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCRGVAG*CWSVSV
Trigger: AACACTTACGCTCCAACAGCAACCAGCTACACCCCT...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTGCTTTGCTCCAGACTaGCAGACAGGGGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSCFAPD*QTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATGCTTTGCTCCAGACTaGCAGACAGGGGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLCFAPD*QTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCACTGCATAGTCTGCTTTaGTCCAGACTGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPLHSLL*SRLPDR
Trigger: CCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCCTGCATAGTCTGCTTTaGTCCAGACTGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCLHSLL*SRLPDR
Trigger: CCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCACCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPPSCIV*FAPDCQ
Trigger: CTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLPSCIV*FAPDCQ
Trigger: CTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTACCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLPSCIV*FAPDCQ
Trigger: CTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGILSPS*IVCFAP
Trigger: TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGAT...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCILSPS*IVCFAP
Trigger: TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGAT...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCATGGTCTGAGCCATCATaGACTCTGCGTGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPWSEPS*TLRAPL
Trigger: CAAAGGAGCACGCAGAGTCCATGATGGCTCAGACCA...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR CCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTGGTCTGAGCCATCATaGACTCTGCGTGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSWSEPS*TLRAPL
Trigger: CAAAGGAGCACGCAGAGTCCATGATGGCTCAGACCA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR CCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACCGGGGAAAAGTCTaGGAGAGAGAATCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPDRGKV*ERESWR
Trigger: TCTCCACGATTCTCTCTCCCAGACTTTTCCCCGGTC...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000636340.1
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCTVRQT*TFPHRG
Trigger: CCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGT...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLTVRQT*TFPHRG
Trigger: CCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGT...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPTVRQT*TFPHRG
Trigger: CCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGT...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAACGCTCTCCCAATCCTaGTCTCAGGCGATTGTCATA +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRTLSQS*SQAIVI
Trigger: TATGACAATCGCCTGAGACCAGGATTGGGAGAGCGT...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTCACTGTCAGCCTCATaGTGTACAGCAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDSLSAS*CTARCH
Trigger: ATGGCACCTTGCTGTACACCATGAGGCTGACAGTGA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGATTTAGTGGGCAAGCATaGGCATCCATAGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRFSGQA*ASIGKS
Trigger: GGACTTCCCTATGGATGCCCATGCTTGCCCACTAAA...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTTTAGTGGGCAAGCATaGGCATCCATAGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDFSGQA*ASIGKS
Trigger: GGACTTCCCTATGGATGCCCATGCTTGCCCACTAAA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTTCCTCATCGCGGGCTaGAGCAGCTTGATTTCAGAA +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDFLIAG*SSLISE
Trigger: TTCTGAAATCAAGCTGCTCCAGCCCGCGATGAGGAA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637827.1
CDS-3UTR TCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCGGGTCCGAAACTGGTaGCGAAGATATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLRVRNW*RRYQSS
Trigger: TGAAGACTGATATCTTCGTCACCAGTTTCGGACCCG...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCCGGGTCCGAAACTGGTaGCGAAGATATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSRVRNW*RRYQSS
Trigger: TGAAGACTGATATCTTCGTCACCAGTTTCGGACCCG...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTTCCATATCATGGTCTaGAACGGGTCCGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDFHIMV*NGSETG
Trigger: ACCAGTTTCGGACCCGTTTCAGACCATGATATGGAA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTTCCATATCATGGTCTaGAACGGGTCCGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCFHIMV*NGSETG
Trigger: ACCAGTTTCGGACCCGTTTCAGACCATGATATGGAA...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACGGGAAGGCTATTCTTaGCAGTCGGTCAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRREGYS*QSVNFA
Trigger: AGCAAAATTGACCGACTGTCAAGAATAGCCTTCCCG...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCGTGGGGGCTTTTAGCTaGGGCTCTCTGTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCVGAFS*GSLFKY
Trigger: GTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCAC...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTGTCTCCTTCTGACATaGCTTTGCTCTTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDCLLLT*LCSFAC
Trigger: GCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTGTCTCCTTCTGACATaGCTTTGCTCTTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCCLLLT*LCSFAC
Trigger: GCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACA...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTGGGAAATGTGTGGAATaGCTTGAACAGAGAGCAACT +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSGKCVE*LEQRAT
Trigger: AGTTGCTCTCTGTTCAAGTCATTCCACACATTTCCC...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCGGGCTGGAGCAGCTTaGTTTCAGAAGCAACTGTAT +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLRAGAA*FQKQLY
Trigger: ATACAGTTGCTTCTGAAATCAAGCTGCTCCAGCCCG...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637827.1
CDS-3UTR GCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTCCCAATATCCAATCTaGAGCTCTGAATTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSSQYPI*SSELCW
Trigger: CCAGCACAATTCAGAGCTGCAGATTGGATATTGGGA...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000023897.10
CDS-3UTR GCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAGAGCCAGCGCGAGTCTaGGAGTCCGAGTCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKREPARV*ESESGR
Trigger: GCGCCCGGACTCGGACTCGCAGACTCGCGCTGGCTC...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR GCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTTCTTCCAGTCAGTGTaGTCAGAAGGAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSFFQSV*SEGGSR
Trigger: CCTGGATCCTCCTTCTGAGCACACTGACTGGAAGAA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGTTCTTCCAGTCAGTGTaGTCAGAAGGAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLFFQSV*SEGGSR
Trigger: CCTGGATCCTCCTTCTGAGCACACTGACTGGAAGAA...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGGGAAGTCCTCCAAATaGATCGGACATTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCGKSSK*IGHSAL
Trigger: GAGAGCTGAATGTCCGATGCATTTGGAGGACTTCCC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAGGGAAGTCCTCCAAATaGATCGGACATTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLGKSSK*IGHSAL
Trigger: GAGAGCTGAATGTCCGATGCATTTGGAGGACTTCCC...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGGAACCACACTTTTaGCATCCCATGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRLEPHF*HPMHNL
Trigger: GAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAG...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCTGGAACCACACTTTTaGCATCCCATGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCLEPHF*HPMHNL
Trigger: GAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAG...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTTTGCTCCAGACTaGCAGACAGGGGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLCFAPD*QTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCA...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATCCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNPSCIV*FAPDCQ
Trigger: CTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRILSPS*IVCFAP
Trigger: TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGAT...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDILSPS*IVCFAP
Trigger: TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGAT...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGTGCCTCTCACTCACTTaGTCTGAGCCATCATGGACT +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLCLSLT*SEPSWT
Trigger: AGTCCATGATGGCTCAGACCAAGTGAGTGAGAGGCA...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR CCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATGCCTCTCACTCACTTaGTCTGAGCCATCATGGACT +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLCLSLT*SEPSWT
Trigger: AGTCCATGATGGCTCAGACCAAGTGAGTGAGAGGCA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR CCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATGACCGGGGAAAAGTCTaGGAGAGAGAATCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNDRGKV*ERESWR
Trigger: TCTCCACGATTCTCTCTCCCAGACTTTTCCCCGGTC...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000636340.1
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNTVRQT*TFPHRG
Trigger: CCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGT...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGACGCTCTCCCAATCCTaGTCTCAGGCGATTGTCATA +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLTLSQS*SQAIVI
Trigger: TATGACAATCGCCTGAGACCAGGATTGGGAGAGCGT...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAACGCTCTCCCAATCCTaGTCTCAGGCGATTGTCATA +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPTLSQS*SQAIVI
Trigger: TATGACAATCGCCTGAGACCAGGATTGGGAGAGCGT...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCACGCTCTCCCAATCCTaGTCTCAGGCGATTGTCATA +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCTLSQS*SQAIVI
Trigger: TATGACAATCGCCTGAGACCAGGATTGGGAGAGCGT...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATCACTGTCAGCCTCATaGTGTACAGCAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLSLSAS*CTARCH
Trigger: ATGGCACCTTGCTGTACACCATGAGGCTGACAGTGA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTCACTGTCAGCCTCATaGTGTACAGCAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSSLSAS*CTARCH
Trigger: ATGGCACCTTGCTGTACACCATGAGGCTGACAGTGA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCATTTAGTGGGCAAGCATaGGCATCCATAGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPFSGQA*ASIGKS
Trigger: GGACTTCCCTATGGATGCCCATGCTTGCCCACTAAA...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTTTAGTGGGCAAGCATaGGCATCCATAGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCFSGQA*ASIGKS
Trigger: GGACTTCCCTATGGATGCCCATGCTTGCCCACTAAA...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTTTTCTTGGGTTCTGGTaGTTTTGTTTCGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGFLGFW*FCFGLD
Trigger: GTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAA...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTTTCTTGGGTTCTGGTaGTTTTGTTTCGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSFLGFW*FCFGLD
Trigger: GTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAA...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTCTATTGATGTGGTGTaGGGGCTTTTAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCSIDVV*GLLAEA
Trigger: AGCCTCAGCTAAAAGCCCCCACACCACATCAATAGA...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGATCTATTGATGTGGTGTaGGGGCTTTTAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRSIDVV*GLLAEA
Trigger: AGCCTCAGCTAAAAGCCCCCACACCACATCAATAGA...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTACATTGCTCAAGACTTaGGTTTGGATCCCAACTGTC +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSTLLKT*VWIPTV
Trigger: GACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGT...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTGCGTGCTCCTTTGCTaGAGATTTCACACCCAAATT +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDCVLLC*RFHTQI
Trigger: AATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR TCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTCGGGTCCGAAACTGGTaGCGAAGATATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLRVRNW*RRYQSS
Trigger: TGAAGACTGATATCTTCGTCACCAGTTTCGGACCCG...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTTCCATATCATGGTCTaGAACGGGTCCGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSFHIMV*NGSETG
Trigger: ACCAGTTTCGGACCCGTTTCAGACCATGATATGGAA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTTCCATATCATGGTCTaGAACGGGTCCGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCFHIMV*NGSETG
Trigger: ACCAGTTTCGGACCCGTTTCAGACCATGATATGGAA...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GTTTGTCCAAGAAGGTCATACTGGTTTAGACGTGATCCATCTTCTGCTACAACCAGGTGCCATCCTCTGTaGTCCGCAGGAGTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VCPRRSYWFRRDPSSATTRCHPL*SAGVCW
Trigger: CCAACAAACTCCTGCGGATCACAGAGGATGGCACCT...GGTTGTAGCAGAAGATGGATCACGTCTAAACCAGTATGACCTTCTTGGACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR TCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTATATTCTCCTGTACTTaGCTGGACAATTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSIFSCT*LDNSRV
Trigger: GACTCTGGAATTGTCCAGTCAAGTACAGGAGAATAT...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTATATTCTCCTGTACTTaGCTGGACAATTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGIFSCT*LDNSRV
Trigger: GACTCTGGAATTGTCCAGTCAAGTACAGGAGAATAT...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTCCAGAAGGAGACTTGTaGGAGAATCACTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCPEGDL*ENHCHY
Trigger: ATAATGACAGTGATTCTCTCACAAGTCTCCTTCTGG...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTCCAGAAGGAGACTTGTaGGAGAATCACTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSPEGDL*ENHCHY
Trigger: ATAATGACAGTGATTCTCTCACAAGTCTCCTTCTGG...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCGGGAAGGCTATTCTTaGCAGTCGGTCAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLREGYS*QSVNFA
Trigger: AGCAAAATTGACCGACTGTCAAGAATAGCCTTCCCG...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGTGGGGGCTTTTAGCTaGGGCTCTCTGTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCVGAFS*GSLFKY
Trigger: GTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCAC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGTGGGGGCTTTTAGCTaGGGCTCTCTGTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPVGAFS*GSLFKY
Trigger: GTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCAC...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCGTGGGGGCTTTTAGCTaGGGCTCTCTGTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSVGAFS*GSLFKY
Trigger: GTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCAC...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTAAATGTGCTCTACAATaGGCAACTGCACCTTTACGT +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCKCALQ*ATAPLR
Trigger: ACGTAAAGGTGCAGTTGCTCATTGTAGAGCACATTT...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTAAATGTGCTCTACAATaGGCAACTGCACCTTTACGT +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGKCALQ*ATAPLR
Trigger: ACGTAAAGGTGCAGTTGCTCATTGTAGAGCACATTT...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGAGTGTGTTTAGACCGTaGCTTGTGGATTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLSVFRP*LVDSEH
Trigger: GTGCTCAGAATCCACAAGTCACGGTCTAAACACACT...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAGTGTGTTTAGACCGTaGCTTGTGGATTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLSVFRP*LVDSEH
Trigger: GTGCTCAGAATCCACAAGTCACGGTCTAAACACACT...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCGGAATCATTCCTTTaGCTCGAGCTCCATCATTCT +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLPESFL*LELHHS
Trigger: AGAATGATGGAGCTCGAGGCAAAGGAATGATTCCGG...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000023897.10
ENST00000638112.1
CDS-3UTR GCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTTCTTCCAGTCAGTGTaGTCAGAAGGAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLFFQSV*SEGGSR
Trigger: CCTGGATCCTCCTTCTGAGCACACTGACTGGAAGAA...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATGGGAAGTCCTCCAAATaGATCGGACATTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNGKSSK*IGHSAL
Trigger: GAGAGCTGAATGTCCGATGCATTTGGAGGACTTCCC...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTGGGAAGTCCTCCAAATaGATCGGACATTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLGKSSK*IGHSAL
Trigger: GAGAGCTGAATGTCCGATGCATTTGGAGGACTTCCC...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTACCAATCCATAGCTGTTaGATAAGCCACCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLPIHSC*ISHLRE
Trigger: CTCCCTAAGGTGGCTTATGCAACAGCTATGGATTGG...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAATCCATAGCTGTTaGATAAGCCACCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLPIHSC*ISHLRE
Trigger: CTCCCTAAGGTGGCTTATGCAACAGCTATGGATTGG...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTGGAACCACACTTTTaGCATCCCATGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLLEPHF*HPMHNL
Trigger: GAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAG...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCCTGGAACCACACTTTTaGCATCCCATGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCLEPHF*HPMHNL
Trigger: GAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAG...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTACTGGAACCACACTTTTaGCATCCCATGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLLEPHF*HPMHNL
Trigger: GAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAG...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCCTGGAACCACACTTTTaGCATCCCATGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSLEPHF*HPMHNL
Trigger: GAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAG...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATAGGGGTGTAGCTGGTTaGTGTTGGAGCGTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNRGVAG*CWSVSV
Trigger: AACACTTACGCTCCAACAGCAACCAGCTACACCCCT...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGTTGCACTTTGCTTTGCTCCAGACTaGCAGACAGGGGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GSGGFVSGLTSLGSMVALCFAPD*QTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCA...AAGTGCAACCATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR GCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLILSPS*IVCFAP
Trigger: TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGAT...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPILSPS*IVCFAP
Trigger: TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGAT...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLILSPS*IVCFAP
Trigger: TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGAT...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACCTTTGCTCTTTCGCTTaGTCTGTCAGAATCCTGTCT +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDLCSFA*SVRILS
Trigger: AGACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAG...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCTTTGCTCTTTCGCTTaGTCTGTCAGAATCCTGTCT +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCLCSFA*SVRILS
Trigger: AGACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAG...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCGCGGGCTGGAGCAGCTaGTGTGGGATCAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCAGWSS*CGIRLL
Trigger: CAGGAGCCTGATCCCACAGCAGCTGCTCCAGCCCGC...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS-3UTR GCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGTTACCTCTGAATTGTaGTGGGTTCCTGGACGAAGA +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCVTSEL*WVPGRR
Trigger: TCTTCGTCCAGGAACCCAGCACAATTCAGAGGTAAC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS-3UTR CCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAAGCTCTGAATTGTGCTaGGTTCCTGGACGAAGAATA +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRSSELC*VPGRRI
Trigger: TATTCTTCGTCCAGGAACCCAGCACAATTCAGAGCT...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000023897.10
CDS-3UTR CCA 90 bp CAACATATTCTCCTGTACTTGACTGGACAATTCCAGAGTCTACTGTTTGTCCAAGAATCGTGGAGAGACTaGAGCCAGCGCGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: QHILLYLTGQFQSLLFVQESWRD*SQRESA
Trigger: CGCAGACTCGCGCTGGCTCCAGTCTCTCCACGATTC...TTGGACAAACAGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637044.1
CDS-3UTR CCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATACGCTCTCCCAATCCTaGTCTCAGGCGATTGTCATA +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNTLSQS*SQAIVI
Trigger: TATGACAATCGCCTGAGACCAGGATTGGGAGAGCGT...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTACGCTCTCCCAATCCTaGTCTCAGGCGATTGTCATA +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLTLSQS*SQAIVI
Trigger: TATGACAATCGCCTGAGACCAGGATTGGGAGAGCGT...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTCACTGTCAGCCTCATaGTGTACAGCAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLSLSAS*CTARCH
Trigger: ATGGCACCTTGCTGTACACCATGAGGCTGACAGTGA...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTTTAGTGGGCAAGCATaGGCATCCATAGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLFSGQA*ASIGKS
Trigger: GGACTTCCCTATGGATGCCCATGCTTGCCCACTAAA...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCCAAGAAGGTCATACTaGTTTAGACGTGATCCATCT +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGPRRSY*FRRDPS
Trigger: AGATGGATCACGTCTAAACCAGTATGACCTTCTTGG...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTCCAAGAAGGTCATACTaGTTTAGACGTGATCCATCT +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSPRRSY*FRRDPS
Trigger: AGATGGATCACGTCTAAACCAGTATGACCTTCTTGG...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTTTCTTGGGTTCTGGTaGTTTTGTTTCGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCFLGFW*FCFGLD
Trigger: GTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAA...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATCTATTGATGTGGTGTaGGGGCTTTTAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLSIDVV*GLLAEA
Trigger: AGCCTCAGCTAAAAGCCCCCACACCACATCAATAGA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTCTATTGATGTGGTGTaGGGGCTTTTAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSSIDVV*GLLAEA
Trigger: AGCCTCAGCTAAAAGCCCCCACACCACATCAATAGA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAACATTGCTCAAGACTTaGGTTTGGATCCCAACTGTC +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRTLLKT*VWIPTV
Trigger: GACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGT...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACACATTGCTCAAGACTTaGGTTTGGATCCCAACTGTC +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDTLLKT*VWIPTV
Trigger: GACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGT...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTTTTCGTGTTCAGAATaGGAGAGACCCCTACACAAG +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDFSCSE*ERPLHK
Trigger: CTTGTGTAGGGGTCTCTCCCATTCTGAACACGAAAA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS-3UTR TCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCATATTCTCCTGTACTTaGCTGGACAATTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCIFSCT*LDNSRV
Trigger: GACTCTGGAATTGTCCAGTCAAGTACAGGAGAATAT...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACCAGAAGGAGACTTGTaGGAGAATCACTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRPEGDL*ENHCHY
Trigger: ATAATGACAGTGATTCTCTCACAAGTCTCCTTCTGG...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTTGGGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGTTGCCGGGAAGGCTATTCTTaGCAGTCGGTCAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: LGFWWFCFGLDLFRFYGCREGYS*QSVNFA
Trigger: AGCAAAATTGACCGACTGTCAAGAATAGCCTTCCCG...GCAACCATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR TCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTGTGGGGGCTTTTAGCTaGGGCTCTCTGTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLVGAFS*GSLFKY
Trigger: GTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCAC...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCACATTCTGTCTCCTTCTaGCATGACTTTGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPHSVSF*HDFALS
Trigger: CGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAATG...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCATTCTGTCTCCTTCTaGCATGACTTTGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLHSVSF*HDFALS
Trigger: CGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAATG...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTACATTCTGTCTCCTTCTaGCATGACTTTGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLHSVSF*HDFALS
Trigger: CGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAATG...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCCATTCTGTCTCCTTCTaGCATGACTTTGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSHSVSF*HDFALS
Trigger: CGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAATG...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAAATGTGCTCTACAATaGGCAACTGCACCTTTACGT +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDKCALQ*ATAPLR
Trigger: ACGTAAAGGTGCAGTTGCTCATTGTAGAGCACATTT...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCAAATGTGCTCTACAATaGGCAACTGCACCTTTACGT +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCKCALQ*ATAPLR
Trigger: ACGTAAAGGTGCAGTTGCTCATTGTAGAGCACATTT...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGGGAAATGTGTGGAATaGCTTGAACAGAGAGCAACT +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCGKCVE*LEQRAT
Trigger: AGTTGCTCTCTGTTCAAGTCATTCCACACATTTCCC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATACCACTGCCTGCATATaGATGAACGCAAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNTTACI*MNASSE
Trigger: TTCAGAGCTTGCGTTCATTCATATGCAGGCAGTGGT...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428797.7
CDS-3UTR TCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGGAGCAGTGGGATATaGCACCTCATTGGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLWSSGI*HLIGSN
Trigger: ATTGCTTCCAATGAGGTGTCATATCCCACTGCTCCA...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635880.1
CDS-3UTR GCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATCCGGAATCATTCCTTTaGCTCGAGCTCCATCATTCT +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNPESFL*LELHHS
Trigger: AGAATGATGGAGCTCGAGGCAAAGGAATGATTCCGG...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000023897.10
ENST00000638112.1
CDS-3UTR GCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCATCATGGACTCTGCGTaGTCCTTTGCTGAAGATTTC +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCIMDSA*SFAEDF
Trigger: GAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGAT...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR GCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATCTGGAACCACACTTTTaGCATCCCATGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNLEPHF*HPMHNL
Trigger: GAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAG...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTTTTAGGTTCTATGGTTaGACTTTTAGCAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGFRFYG*TFSNGG
Trigger: GCCACCATTGCTAAAAGTGCAACCATAGAACCTAAA...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTTTGGCTTTTCTGGAACCACACTTTTGCCATCCCATGCATAACCTCTCTTAGTCTGCATAGTCTGCTTTaGTCCAGACTGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: LWLFWNHTFAIPCITSLSLHSLL*SRLPDR
Trigger: CCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG...ACTAAGAGAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAGAAAAGCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR GCA 90 bp GTTTTCTTGGGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGCCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: VFLGSGGFVSGLTSLGSMPSCIV*FAPDCQ
Trigger: CTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG...CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR GCA 90 bp AGATCTATTGATGTGGTGTGGGGGCTTTTAGCTGAGGCTCTCTGTTTAAATACGCCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: RSIDVVWGLLAEALCLNTPSCIV*FAPDCQ
Trigger: CTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG...CGTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCACACCACATCAATAGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR GCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTTTGCTCTTTCGCTTaGTCTGTCAGAATCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLLCSFA*SVRILS
Trigger: AGACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAG...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGGAATCGTGGAGAGACTaGAGCCAGCGCGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWESWRD*SQRESA
Trigger: CGCAGACTCGCGCTGGCTCCAGTCTCTCCACGATTC...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
CDS-3UTR CCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTGTATATTCCATATCATaGTCTGAAACGGGTCCGAAA +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSVYSIS*SETGPK
Trigger: TTTCGGACCCGTTTCAGACCATGATATGGAATATAC...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGAGCGTGCTGGCTCTCTaGTCCATTCATAAACAACTT +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLSVLAL*SIHKQL
Trigger: AAGTTGTTTATGAATGGACCAGAGAGCCAGCACGCT...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGCGTGCTGGCTCTCTaGTCCATTCATAAACAACTT +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSSVLAL*SIHKQL
Trigger: AAGTTGTTTATGAATGGACCAGAGAGCCAGCACGCT...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCCAAGAAGGTCATACTaGTTTAGACGTGATCCATCT +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCPRRSY*FRRDPS
Trigger: AGATGGATCACGTCTAAACCAGTATGACCTTCTTGG...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAGTAGCTGGTTGCTGTTaGAGCGTAAGTGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRVAGCC*SVSVVF
Trigger: AAAAACAACACTTACGCTCCAACAGCAACCAGCTAC...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTTTCTTGGGTTCTGGTaGTTTTGTTTCGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSFLGFW*FCFGLD
Trigger: GTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCATTTCTTGGGTTCTGGTaGTTTTGTTTCGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPFLGFW*FCFGLD
Trigger: GTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAA...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTCTATTGATGTGGTGTaGGGGCTTTTAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLSIDVV*GLLAEA
Trigger: AGCCTCAGCTAAAAGCCCCCACACCACATCAATAGA...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTGAATTAAGTGAGTGTTaGGCTCATGTGCTATCTGAA +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGELSEC*AHVLSE
Trigger: TTCAGATAGCACATGAGCCCAACACTCACTTAATTC...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAACATTGCTCAAGACTTaGGTTTGGATCCCAACTGTC +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLTLLKT*VWIPTV
Trigger: GACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGT...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGAAGCAATGGAAACCTaGACCATCCATTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCEAMET*TIHSPL
Trigger: AAGTGGAGAATGGATGGTCCAGGTTTCCATTGCTTC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635880.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTACCTCATTGGAAGCAATaGAAACCTGGACCATCCATT +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLPHWKQ*KPGPSI
Trigger: AATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGG...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635880.1
CDS-3UTR CCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGCTCATTGGAAGCAATaGAAACCTGGACCATCCATT +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPAHWKQ*KPGPSI
Trigger: AATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGC...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS-3UTR TCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATTGCGTGCTCCTTTGCTaGAGATTTCACACCCAAATT +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNCVLLC*RFHTQI
Trigger: AATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCA...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR TCA 90 bp CTTTGGCTTTTCTGGAACCACACTTTTGCCATCCCATGCATAACCTCTCTTAGTCGGGTCCGAAACTGGTaGCGAAGATATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LWLFWNHTFAIPCITSLSRVRNW*RRYQSS
Trigger: TGAAGACTGATATCTTCGTCACCAGTTTCGGACCCG...ACTAAGAGAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAGAAAAGCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR TCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTCATCCTTCCAGCTTTaGCGGAAAAATACATCTATT +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSSSFQL*RKNTSI
Trigger: AATAGATGTATTTTTCCGTCAAAGCTGGAAGGATGA...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTTCATCCTTCCAGCTTTaGCGGAAAAATACATCTATT +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGSSFQL*RKNTSI
Trigger: AATAGATGTATTTTTCCGTCAAAGCTGGAAGGATGA...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCATCCTTCCAGCTTTaGCGGAAAAATACATCTATT +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCSSFQL*RKNTSI
Trigger: AATAGATGTATTTTTCCGTCAAAGCTGGAAGGATGA...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCATATTCTCCTGTACTTaGCTGGACAATTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCIFSCT*LDNSRV
Trigger: GACTCTGGAATTGTCCAGTCAAGTACAGGAGAATAT...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCATATTCTCCTGTACTTaGCTGGACAATTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSIFSCT*LDNSRV
Trigger: GACTCTGGAATTGTCCAGTCAAGTACAGGAGAATAT...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTCAAGTGGAAATaGGTGGTCATAACAACATAT +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGLFKWK*VVITTY
Trigger: ATATGTTGTTATGACCACTCATTTCCACTTGAAGAG...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTTTTTCTTGTATCTTTaGACCATCTTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCFFLYL*TIFPLF
Trigger: AAAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAA...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATGGGAAATGTGTGGAATaGCTTGAACAGAGAGCAACT +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNGKCVE*LEQRAT
Trigger: AGTTGCTCTCTGTTCAAGTCATTCCACACATTTCCC...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTTTTCACACCCAAATTTaGTTCCCAATATCCAATCTG +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGFHTQI*FPISNL
Trigger: CAGATTGGATATTGGGAAGCAAATTTGGGTGTGAAA...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR GCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAGGGGCGTCCTCGCTCTaGCTCTCACTCACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKGASSL*LSLTWS
Trigger: AGACCAAGTGAGTGAGAGGCAGAGCGAGGACGCCCC...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
ENST00000638112.1
CDS-3UTR GCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTTTCTTCCAGTCAGTGTaGTCAGAAGGAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPFFQSV*SEGGSR
Trigger: CCTGGATCCTCCTTCTGAGCACACTGACTGGAAGAA...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTGGGAAGTCCTCCAAATaGATCGGACATTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPGKSSK*IGHSAL
Trigger: GAGAGCTGAATGTCCGATGCATTTGGAGGACTTCCC...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTTTGGCTTTTCTGGAACCACACTTTTGCCATCCCATGCATAACCTCTCTTAGTAGGGGTGTAGCTGGTTaGTGTTGGAGCGTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LWLFWNHTFAIPCITSLSRGVAG*CWSVSV
Trigger: AACACTTACGCTCCAACAGCAACCAGCTACACCCCT...ACTAAGAGAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAGAAAAGCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR GCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTCTTTGCTCTTTCGCTTaGTCTGTCAGAATCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLLCSFA*SVRILS
Trigger: AGACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAG...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCATGTGGTTCATACTTaGTGTTCTGTTCTTAAATGC +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGHVVHT*CSVLKC
Trigger: GCATTTAAGAACAGAACAGCAAGTATGAACCACATG...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCATGTTAGGTTTTATTaGCACTTCACTGCACTAAAG +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGHVRFY*HFTALK
Trigger: CTTTAGTGCAGTGAAGTGGCAATAAAACCTAACATG...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTCAAATATTAAACCACTaGCTGCATATGAATGAACGC +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSQILNH*LHMNER
Trigger: GCGTTCATTCATATGCAGGCAGTGGTTTAATATTTG...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428797.7
CDS-3UTR GCA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCATCAGGCTCCTGTCCTaGTCGCTCCCTTGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCIRLLS*SLPCSL
Trigger: GAGCGAGCAAGGGAGCGAGCAGGACAGGAGCCTGAT...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS-3UTR GCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTACGAAGAGTTCACTGTaGTGTATTTTGCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCTKSSL*CILQCK
Trigger: TTTGCATTGCAAAATACAGCACAGTGAACTCTTCGT...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637044.1
CDS-3UTR CCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTTGGGAGAGAGAATCGTaGAGAGACTGGAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSWERES*RDWSQR
Trigger: GCGCTGGCTCCAGTCTCTCCACGATTCTCTCTCCCA...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000636340.1
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTACGCTCTCCCAATCCTaGTCTCAGGCGATTGTCATA +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPTLSQS*SQAIVI
Trigger: TATGACAATCGCCTGAGACCAGGATTGGGAGAGCGT...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTTCTTTCCATTGTaGAAAAATGTGTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPDFFPL*KNVSGV
Trigger: GACTCCGGACACATTTTTCCACAATGGAAAGAAGTC...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAGACTTCTTTCCATTGTaGAAAAATGTGTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLDFFPL*KNVSGV
Trigger: GACTCCGGACACATTTTTCCACAATGGAAAGAAGTC...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGACTTCTTTCCATTGTaGAAAAATGTGTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCDFFPL*KNVSGV
Trigger: GACTCCGGACACATTTTTCCACAATGGAAAGAAGTC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTTCACTGTCAGCCTCATaGTGTACAGCAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPSLSAS*CTARCH
Trigger: ATGGCACCTTGCTGTACACCATGAGGCTGACAGTGA...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATAGCGTGCTGGCTCTCTaGTCCATTCATAAACAACTT +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNSVLAL*SIHKQL
Trigger: AAGTTGTTTATGAATGGACCAGAGAGCCAGCACGCT...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAAGAAGGTCATACTaGTTTAGACGTGATCCATCT +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLPRRSY*FRRDPS
Trigger: AGATGGATCACGTCTAAACCAGTATGACCTTCTTGG...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATCTCCTGTACTTGACTaGACAATTCCAGAGTCTACT +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLSPVLD*TIPEST
Trigger: AGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTCTCCTGTACTTGACTaGACAATTCCAGAGTCTACT +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSSPVLD*TIPEST
Trigger: AGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCTCCTGTACTTGACTaGACAATTCCAGAGTCTACT +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCSPVLD*TIPEST
Trigger: AGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGA...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTATCCTTTACTTTCTTTaGCTTTTCTGGAACCACACT +
Preference number: 4 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGILYFL*LFWNHT
Trigger: AGTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGAT...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTATCCTTTACTTTCTTTaGCTTTTCTGGAACCACACT +
Preference number: 4 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSILYFL*LFWNHT
Trigger: AGTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGAT...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAGTAGCTGGTTGCTGTTaGAGCGTAAGTGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLVAGCC*SVSVVF
Trigger: AAAAACAACACTTACGCTCCAACAGCAACCAGCTAC...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGTAGCTGGTTGCTGTTaGAGCGTAAGTGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCVAGCC*SVSVVF
Trigger: AAAAACAACACTTACGCTCCAACAGCAACCAGCTAC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATTTTCTTGGGTTCTGGTaGTTTTGTTTCGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNFLGFW*FCFGLD
Trigger: GTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAA...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGTTGCACTTTCTATTGATGTGGTGTaGGGGCTTTTAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSGGFVSGLTSLGSMVALSIDVV*GLLAEA
Trigger: AGCCTCAGCTAAAAGCCCCCACACCACATCAATAGA...AAGTGCAACCATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR CCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAGAATTAAGTGAGTGTTaGGCTCATGTGCTATCTGAA +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRELSEC*AHVLSE
Trigger: TTCAGATAGCACATGAGCCCAACACTCACTTAATTC...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCGAATTAAGTGAGTGTTaGGCTCATGTGCTATCTGAA +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCELSEC*AHVLSE
Trigger: TTCAGATAGCACATGAGCCCAACACTCACTTAATTC...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACCTCAAGACTTGGGTTTaGATCCCAACTGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDLKTWV*IPTVLF
Trigger: AAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAG...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACGCAGGGTTACACGTGTaGGGAGAGCACTCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNAGLHV*GEHSSR
Trigger: GCGAGACGAGTGCTCTCCCCACACGTGTAACCCTGC...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428797.7
CDS-3UTR CCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTCGCGGGCTGGAGCAGTaGGATATGACACCTCATTGG +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSRGLEQ*DMTPHW
Trigger: CCAATGAGGTGTCATATCCCACTGCTCCAGCCCGCG...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635880.1
CDS-3UTR CCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATACCTCTGAATTGTGCTaGGTTCCTGGACGAAGAATA +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNTSELC*VPGRRI
Trigger: TATTCTTCGTCCAGGAACCCAGCACAATTCAGAGGT...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS-3UTR CCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATCCAATCTGCAGCTTTaGAGGCAACTGTTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLSNLQL*RQLFVY
Trigger: ATAGACAAACAGTTGCCTCCAAAGCTGCAGATTGGA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS-3UTR TCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGATCATCCTTCCAGCTTTaGCGGAAAAATACATCTATT +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRSSFQL*RKNTSI
Trigger: AATAGATGTATTTTTCCGTCAAAGCTGGAAGGATGA...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACCTCTTCAAGTGGAAATaGGTGGTCATAACAACATAT +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDLFKWK*VVITTY
Trigger: ATATGTTGTTATGACCACTCATTTCCACTTGAAGAG...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATCCAGAAGGAGACTTGTaGGAGAATCACTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNPEGDL*ENHCHY
Trigger: ATAATGACAGTGATTCTCTCACAAGTCTCCTTCTGG...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTTGGGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGTTGCCCAGAAGGAGACTTGTaGGAGAATCACTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: LGFWWFCFGLDLFRFYGCPEGDL*ENHCHY
Trigger: ATAATGACAGTGATTCTCTCACAAGTCTCCTTCTGG...GCAACCATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR TCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTGGGGGCTTTTAGCTaGGGCTCTCTGTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPVGAFS*GSLFKY
Trigger: GTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCAC...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTTGTCTCCTTCTGACATaGCTTTGCTCTTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPCLLLT*LCSFAC
Trigger: GCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACA...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGATTTTTCTTGTATCTTTaGACCATCTTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRFFLYL*TIFPLF
Trigger: AAAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAA...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTTTTTCTTGTATCTTTaGACCATCTTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDFFLYL*TIFPLF
Trigger: AAAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTAAATGTGCTCTACAATaGGCAACTGCACCTTTACGT +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLKCALQ*ATAPLR
Trigger: ACGTAAAGGTGCAGTTGCTCATTGTAGAGCACATTT...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTGGATAGCAGCTTTTTaGGAAAAACATTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDWIAAF*EKHCSR
Trigger: TCTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGATCCAATCTGCAGCTTTaGTCAAATATTAAACCACTG +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRSNLQL*SNIKPL
Trigger: CAGTGGTTTAATATTTGATCAAAGCTGCAGATTGGA...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428797.7
CDS-3UTR GCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTCCAATCCATAGCTGTTaGATAAGCCACCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPPIHSC*ISHLRE
Trigger: CTCCCTAAGGTGGCTTATGCAACAGCTATGGATTGG...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTTTGGCTTTTCTGGAACCACACTTTTGCCATCCCATGCATAACCTCTCTTAGTCTGGAACCACACTTTTaGCATCCCATGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: LWLFWNHTFAIPCITSLSLEPHF*HPMHNL
Trigger: GAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAG...ACTAAGAGAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAGAAAAGCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR GCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTTTAGGTTCTATGGTTaGACTTTTAGCAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSFRFYG*TFSNGG
Trigger: GCCACCATTGCTAAAAGTGCAACCATAGAACCTAAA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGTTTAGGTTCTATGGTTaGACTTTTAGCAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLFRFYG*TFSNGG
Trigger: GCCACCATTGCTAAAAGTGCAACCATAGAACCTAAA...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATTTAGGTTCTATGGTTaGACTTTTAGCAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLFRFYG*TFSNGG
Trigger: GCCACCATTGCTAAAAGTGCAACCATAGAACCTAAA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTTTAGGTTCTATGGTTaGACTTTTAGCAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCFRFYG*TFSNGG
Trigger: GCCACCATTGCTAAAAGTGCAACCATAGAACCTAAA...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCATTTAGGTTCTATGGTTaGACTTTTAGCAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPFRFYG*TFSNGG
Trigger: GCCACCATTGCTAAAAGTGCAACCATAGAACCTAAA...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GTTTGTCCAAGAAGGTCATACTGGTTTAGACGTGATCCATCTTCTGCTACAACCATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VCPRRSYWFRRDPSSATTILSPS*IVCFAP
Trigger: TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGAT...GGTTGTAGCAGAAGATGGATCACGTCTAAACCAGTATGACCTTCTTGGACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR GCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTCTACAATGAGCAACTaGACCTTTACGTATGAAAGT +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDSTMSN*TFTYES
Trigger: ACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTATTCCAACAGCTAAGTaGAGTGATTCTTACACAATA +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCIPTAK*SDSYTI
Trigger: TATTGTGTAAGAATCACTGCACTTAGCTGTTGGAAT...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTTCACTGCACTAAAGTaGAATAAACATTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCFTALK*NKHSVS
Trigger: TGACACTGAATGTTTATTGCACTTTAGTGCAGTGAA...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCAAACACACTGTTGAATaGCGGAGTCGTGCTTTTATT +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCKHTVE*RSRAFI
Trigger: AATAAAAGCACGACTCCGGCATTCAACAGTGTGTTT...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637827.1
CDS-3UTR GCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGATGCTCTTATATTGCTaGGGTTTCACCCTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLMLLYC*GFTLKE
Trigger: TTCTTTCAGGGTGAAACCGCAGCAATATAAGAGCAT...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636573.1
CDS-3UTR GCA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAATAATGCTCTTATATTaGTGCGGTTTCACCCTGAAA +
Preference number: 4 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRIMLLY*CGFTLK
Trigger: TTTCAGGGTGAAACCGCAGCAATATAAGAGCATTAT...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636573.1
CDS-3UTR CCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGTATATTCCATATCATaGTCTGAAACGGGTCCGAAA +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPVYSIS*SETGPK
Trigger: TTTCGGACCCGTTTCAGACCATGATATGGAATATAC...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGTATATTCCATATCATaGTCTGAAACGGGTCCGAAA +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCVYSIS*SETGPK
Trigger: TTTCGGACCCGTTTCAGACCATGATATGGAATATAC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTGACTTCTTTCCATTGTaGAAAAATGTGTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLDFFPL*KNVSGV
Trigger: GACTCCGGACACATTTTTCCACAATGGAAAGAAGTC...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATCCAAGAAGGTCATACTaGTTTAGACGTGATCCATCT +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNPRRSY*FRRDPS
Trigger: AGATGGATCACGTCTAAACCAGTATGACCTTCTTGG...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTCTCCTGTACTTGACTaGACAATTCCAGAGTCTACT +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLSPVLD*TIPEST
Trigger: AGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGA...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTGTAGCTGGTTGCTGTTaGAGCGTAAGTGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLVAGCC*SVSVVF
Trigger: AAAAACAACACTTACGCTCCAACAGCAACCAGCTAC...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGGAATTAAGTGAGTGTTaGGCTCATGTGCTATCTGAA +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLELSEC*AHVLSE
Trigger: TTCAGATAGCACATGAGCCCAACACTCACTTAATTC...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTTAGACCGTGACTTGTaGATTCTGAGCACTAAATTT +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCLDRDL*ILSTKF
Trigger: AAATTTAGTGCTCAGAATCCACAAGTCACGGTCTAA...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATGATATGACACCTCATTaGAAGCAATGGAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNDMTPH*KQWKPG
Trigger: TCCAGGTTTCCATTGCTTCCAATGAGGTGTCATATC...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635880.1
3UTR CAA 72 bp AGCAGCGGGAAGGCTATTCTTGACAGTCGGTCAATTTaGCTGACACTGTTAAAGGTTTTCTTGGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SSGKAILDSRSI*LTLLKVFLGSG
Trigger: ACCAGAACCCAAGAAAACCTTTAACAGTGTCAGCAAAATTGACCGACTGTCAAGAATAGCCTTCCCGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR TCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTTCCAATCTGCAGCTCTaGATTGTGCTGGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSSNLQL*IVLGSW
Trigger: CCAGGAACCCAGCACAATTCAGAGCTGCAGATTGGA...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000023897.10
CDS-3UTR TCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTTGCGTGCTCCTTTGCTaGAGATTTCACACCCAAATT +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPCVLLC*RFHTQI
Trigger: AATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCA...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR TCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTCATCCTTCCAGCTTTaGCGGAAAAATACATCTATT +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSSSFQL*RKNTSI
Trigger: AATAGATGTATTTTTCCGTCAAAGCTGGAAGGATGA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AAGATATCAGTCTTCACTTCGGTTACACGCTCTCCCAATCCTGGTCTCAGGCGATCATCCTTCCAGCTTTaGCGGAAAAATACATCTATT +
Preference number: 4 (lower is better)
Translates to: KISVFTSVTRSPNPGLRRSSFQL*RKNTSI
Trigger: AATAGATGTATTTTTCCGTCAAAGCTGGAAGGATGA...TCGCCTGAGACCAGGATTGGGAGAGCGTGTAACCGAAGTGAAGACTGATATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636340.1
CDS-3UTR TCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATCATCCTTCCAGCTTTaGCGGAAAAATACATCTATT +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLSSFQL*RKNTSI
Trigger: AATAGATGTATTTTTCCGTCAAAGCTGGAAGGATGA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGGTGCCATCCTCTGTaGTCCGCAGGAGTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKRCHPL*SAGVCW
Trigger: CCAACAAACTCCTGCGGATCACAGAGGATGGCACCT...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTTTCTGCTACAACCACTaGGCGTGCTGGCTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFFCYNH*ACWLSG
Trigger: ACCAGAGAGCCAGCACGCTCAGTGGTTGTAGCAGAA...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCACTCTTCAAGTGGAAATaGGTGGTCATAACAACATAT +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPLFKWK*VVITTY
Trigger: ATATGTTGTTATGACCACTCATTTCCACTTGAAGAG...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCCTCTTCAAGTGGAAATaGGTGGTCATAACAACATAT +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCLFKWK*VVITTY
Trigger: ATATGTTGTTATGACCACTCATTTCCACTTGAAGAG...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCATTTTTCTTGTATCTTTaGACCATCTTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPFFLYL*TIFPLF
Trigger: AAAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAA...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATTTTTCTTGTATCTTTaGACCATCTTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLFFLYL*TIFPLF
Trigger: AAAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTGGATAGCAGCTTTTTaGGAAAAACATTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCWIAAF*EKHCSR
Trigger: TCTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCA...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTATCATGGACTCTGCGTaGTCCTTTGCTGAAGATTTC +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPIMDSA*SFAEDF
Trigger: GAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGAT...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR GCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGAATCACTGTCATTATaGATGGCAGGTATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCESLSL*MAGMFE
Trigger: TTCAAACATACCTGCCATGCATAATGACAGTGATTC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCGAATCACTGTCATTATaGATGGCAGGTATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSESLSL*MAGMFE
Trigger: TTCAAACATACCTGCCATGCATAATGACAGTGATTC...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAGAATCACTGTCATTATaGATGGCAGGTATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLESLSL*MAGMFE
Trigger: TTCAAACATACCTGCCATGCATAATGACAGTGATTC...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAATCACTGTCATTATaGATGGCAGGTATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPESLSL*MAGMFE
Trigger: TTCAAACATACCTGCCATGCATAATGACAGTGATTC...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATCCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNPSCIV*FAPDCQ
Trigger: CTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTCCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSPSCIV*FAPDCQ
Trigger: CTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATCTACAATGAGCAACTaGACCTTTACGTATGAAAGT +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLSTMSN*TFTYES
Trigger: ACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGTCTACAATGAGCAACTaGACCTTTACGTATGAAAGT +
Preference number: 4 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLSTMSN*TFTYES
Trigger: ACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGA...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCATTCCAACAGCTAAGTaGAGTGATTCTTACACAATA +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCIPTAK*SDSYTI
Trigger: TATTGTGTAAGAATCACTGCACTTAGCTGTTGGAAT...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTTCACTGCACTAAAGTaGAATAAACATTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDFTALK*NKHSVS
Trigger: TGACACTGAATGTTTATTGCACTTTAGTGCAGTGAA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGGACCGGGGAAAAGTCTaGGAGAGAGAATCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWDRGKV*ERESWR
Trigger: TCTCCACGATTCTCTCTCCCAGACTTTTCCCCGGTC...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000637044.1
CDS-3UTR CCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGACCGGGGAAAAGTCTaGGAGAGAGAATCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNDRGKV*ERESWR
Trigger: TCTCCACGATTCTCTCTCCCAGACTTTTCCCCGGTC...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000636340.1
ENST00000637044.1
ENST00000638112.1
CDS-3UTR CCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSTVRQT*TFPHRG
Trigger: CCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGT...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWTVRQT*TFPHRG
Trigger: CCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGT...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTGTATATTCCATATCATaGTCTGAAACGGGTCCGAAA +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLVYSIS*SETGPK
Trigger: TTTCGGACCCGTTTCAGACCATGATATGGAATATAC...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GGCCAAATTAGGGGTGTAGCTGGTTGCTGTTGGAGCGTAAGTGTTGTTTTTCTTGACTTCTTTCCATTGTaGAAAAATGTGTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: GQIRGVAGCCWSVSVVFLDFFPL*KNVSGV
Trigger: GACTCCGGACACATTTTTCCACAATGGAAAGAAGTC...AAGAAAAACAACACTTACGCTCCAACAGCAACCAGCTACACCCCTAATTTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR CCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTAGCGTGCTGGCTCTCTaGTCCATTCATAAACAACTT +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPSVLAL*SIHKQL
Trigger: AAGTTGTTTATGAATGGACCAGAGAGCCAGCACGCT...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAATCCTTTACTTTCTTTaGCTTTTCTGGAACCACACT +
Preference number: 4 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLILYFL*LFWNHT
Trigger: AGTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGAT...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAATCCTTTACTTTCTTTaGCTTTTCTGGAACCACACT +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPILYFL*LFWNHT
Trigger: AGTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGAT...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTTTTGTCTACATAAGTaGACTTCACACCCATATGTT +
Preference number: 4 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCFCLHK*TSHPYV
Trigger: AACATATGGGTGTGAAGTCCACTTATGTAGACAAAA...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTTAGACCGTGACTTGTaGATTCTGAGCACTAAATTT +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCLDRDL*ILSTKF
Trigger: AAATTTAGTGCTCAGAATCCACAAGTCACGGTCTAA...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTCTCAAGACTTGGGTTTaGATCCCAACTGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLLKTWV*IPTVLF
Trigger: AAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAG...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTGAATCAGGGATGACTTaGTTTCCTCCTCGGATTTTG +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPESGMT*FPPRIL
Trigger: CAAAATCCGAGGAGGAAACCAAGTCATCCCTGATTC...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS-3UTR TCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGACTCACTCACTTGGTCTaGGCCATCATGGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRLTHLV*AIMDSA
Trigger: CGCAGAGTCCATGATGGCTCAGACCAAGTGAGTGAG...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR TCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATTCTGCTACAACCACTaGGCGTGCTGGCTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRFCYNH*ACWLSG
Trigger: ACCAGAGAGCCAGCACGCTCAGTGGTTGTAGCAGAA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GTTTGTCCAAGAAGGTCATACTGGTTTAGACGTGATCCATCTTCTGCTACAACCATATTCTCCTGTACTTaGCTGGACAATTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: VCPRRSYWFRRDPSSATTIFSCT*LDNSRV
Trigger: GACTCTGGAATTGTCCAGTCAAGTACAGGAGAATAT...GGTTGTAGCAGAAGATGGATCACGTCTAAACCAGTATGACCTTCTTGGACAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR TCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTCTCTTCAAGTGGAAATaGGTGGTCATAACAACATAT +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLLFKWK*VVITTY
Trigger: ATATGTTGTTATGACCACTCATTTCCACTTGAAGAG...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CTTGGGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGTTGCCTCTTCAAGTGGAAATaGGTGGTCATAACAACATAT +
Preference number: 4 (lower is better)
Translates to: LGFWWFCFGLDLFRFYGCLFKWK*VVITTY
Trigger: ATATGTTGTTATGACCACTCATTTCCACTTGAAGAG...GCAACCATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR TCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTCCAGAAGGAGACTTGTaGGAGAATCACTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPPEGDL*ENHCHY
Trigger: ATAATGACAGTGATTCTCTCACAAGTCTCCTTCTGG...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GTTTTCTTGGGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGTTGGTGGGATTTTCTTaGTGTTCTTCTTCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: VFLGSGGFVSGLTSLGSMLVGFS*CSSSSQ
Trigger: CTGACTGGAAGAAGAACATCAAGAAAATCCCACCAA...CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636340.1
CDS-3UTR GCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGTTCTTCCAGTCAGTGTaGTCAGAAGGAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWFFQSV*SEGGSR
Trigger: CCTGGATCCTCCTTCTGAGCACACTGACTGGAAGAA...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTGAATCACTGTCATTATaGATGGCAGGTATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLESLSL*MAGMFE
Trigger: TTCAAACATACCTGCCATGCATAATGACAGTGATTC...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATGAATCACTGTCATTATaGATGGCAGGTATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNESLSL*MAGMFE
Trigger: TTCAAACATACCTGCCATGCATAATGACAGTGATTC...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATAGGGGTGTAGCTGGTTaGTGTTGGAGCGTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNRGVAG*CWSVSV
Trigger: AACACTTACGCTCCAACAGCAACCAGCTACACCCCT...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCTGCTTTGCTCCAGACTaGCAGACAGGGGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCCFAPD*QTGVSC
Trigger: ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCA...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACCTGCATAGTCTGCTTTaGTCCAGACTGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNLHSLL*SRLPDR
Trigger: CCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCCAATATCCAATCTaGAGCTATACAACAAAAGAT +
Preference number: 4 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCSQYPI*SYTTKD
Trigger: ATCTTTTGTTGTATAGCTGCAGATTGGATATTGGGA...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393943.10
CDS-3UTR GCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATTCTACAATGAGCAACTaGACCTTTACGTATGAAAGT +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNSTMSN*TFTYES
Trigger: ACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGA...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAATTCCAACAGCTAAGTaGAGTGATTCTTACACAATA +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPIPTAK*SDSYTI
Trigger: TATTGTGTAAGAATCACTGCACTTAGCTGTTGGAAT...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTCATGTGGTTCATACTTaGTGTTCTGTTCTTAAATGC +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLHVVHT*CSVLKC
Trigger: GCATTTAAGAACAGAACAGCAAGTATGAACCACATG...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATTTATTCTCCATCCCATaGCATCCATATCAAAGACTA +
Preference number: 4 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNLFSIP*HPYQRL
Trigger: TAGTCTTTGATATGGATGGCATGGGATGGAGAATAA...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS-3UTR CCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTTGCCTCTCACTCACTTaGTCTGAGCCATCATGGACT +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSCLSLT*SEPSWT
Trigger: AGTCCATGATGGCTCAGACCAAGTGAGTGAGAGGCA...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR CCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATACGCTCTCCCAATCCTaGTCTCAGGCGATTGTCATA +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNTLSQS*SQAIVI
Trigger: TATGACAATCGCCTGAGACCAGGATTGGGAGAGCGT...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTACGCTCTCCCAATCCTaGTCTCAGGCGATTGTCATA +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSTLSQS*SQAIVI
Trigger: TATGACAATCGCCTGAGACCAGGATTGGGAGAGCGT...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTGACTTCTTTCCATTGTaGAAAAATGTGTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPDFFPL*KNVSGV
Trigger: GACTCCGGACACATTTTTCCACAATGGAAAGAAGTC...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATTCACTGTCAGCCTCATaGTGTACAGCAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNSLSAS*CTARCH
Trigger: ATGGCACCTTGCTGTACACCATGAGGCTGACAGTGA...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTTTTAGTGGGCAAGCATaGGCATCCATAGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSFSGQA*ASIGKS
Trigger: GGACTTCCCTATGGATGCCCATGCTTGCCCACTAAA...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTAGCTGGTTGCTGTTaGAGCGTAAGTGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPVAGCC*SVSVVF
Trigger: AAAAACAACACTTACGCTCCAACAGCAACCAGCTAC...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCATTTTGTCTACATAAGTaGACTTCACACCCATATGTT +
Preference number: 4 (lower is better)
Translates to: FACSVRILSPSCIVCFAPFCLHK*TSHPYV
Trigger: AACATATGGGTGTGAAGTCCACTTATGTAGACAAAA...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTTTTGTCTACATAAGTaGACTTCACACCCATATGTT +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSFCLHK*TSHPYV
Trigger: AACATATGGGTGTGAAGTCCACTTATGTAGACAAAA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GGTTCTGGTGGTTTTGTTTCGGGCTTGACCTCTTTAGGTTCTATGGTTGCACTTCTCAAGACTTGGGTTTaGATCCCAACTGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: GSGGFVSGLTSLGSMVALLKTWV*IPTVLF
Trigger: AAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAG...AAGTGCAACCATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACCACCAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637044.1
CDS-3UTR CCA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTATAGGTCTGTGTTTTaGTGGGATTTTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSYRSVF*WDFLDV
Trigger: AACATCAAGAAAATCCCACCAAAACACAGACCTATA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636340.1
CDS-3UTR TCA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCCGGGTCCGAAACTGGTaGCGAAGATATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCRVRNW*RRYQSS
Trigger: TGAAGACTGATATCTTCGTCACCAGTTTCGGACCCG...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATTTCCATATCATGGTCTaGAACGGGTCCGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNFHIMV*NGSETG
Trigger: ACCAGTTTCGGACCCGTTTCAGACCATGATATGGAA...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTTTCCATATCATGGTCTaGAACGGGTCCGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSFHIMV*NGSETG
Trigger: ACCAGTTTCGGACCCGTTTCAGACCATGATATGGAA...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATCGGGAAGGCTATTCTTaGCAGTCGGTCAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNREGYS*QSVNFA
Trigger: AGCAAAATTGACCGACTGTCAAGAATAGCCTTCCCG...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTCGGGAAGGCTATTCTTaGCAGTCGGTCAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSREGYS*QSVNFA
Trigger: AGCAAAATTGACCGACTGTCAAGAATAGCCTTCCCG...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGCGGGAAGGCTATTCTTaGCAGTCGGTCAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWREGYS*QSVNFA
Trigger: AGCAAAATTGACCGACTGTCAAGAATAGCCTTCCCG...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGGTGGGGGCTTTTAGCTaGGGCTCTCTGTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWVGAFS*GSLFKY
Trigger: GTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCAC...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATTGTCTCCTTCTGACATaGCTTTGCTCTTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNCLLLT*LCSFAC
Trigger: GCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACA...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAGTGTGTTTAGACCGTaGCTTGTGGATTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSSVFRP*LVDSEH
Trigger: GTGCTCAGAATCCACAAGTCACGGTCTAAACACACT...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CAACATATTCTCCTGTACTTGACTGGACAATTCCAGAGTCTACTGTTTGTCCAATATCATATCATGGTCTaGAACGGGTCCGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: QHILLYLTGQFQSLLFVQYHIMV*NGSETG
Trigger: ACCAGTTTCGGACCCGTTTCAGACCATGATATGATA...TTGGACAAACAGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637044.1
CDS-3UTR GCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACGGGAAGTCCTCCAAATaGATCGGACATTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNGKSSK*IGHSAL
Trigger: GAGAGCTGAATGTCCGATGCATTTGGAGGACTTCCC...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATCCAATCCATAGCTGTTaGATAAGCCACCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNPIHSC*ISHLRE
Trigger: CTCCCTAAGGTGGCTTATGCAACAGCTATGGATTGG...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTCCAATCCATAGCTGTTaGATAAGCCACCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSPIHSC*ISHLRE
Trigger: CTCCCTAAGGTGGCTTATGCAACAGCTATGGATTGG...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACAGGGGTGTAGCTGGTTaGTGTTGGAGCGTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNRGVAG*CWSVSV
Trigger: AACACTTACGCTCCAACAGCAACCAGCTACACCCCT...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTAGGGGTGTAGCTGGTTaGTGTTGGAGCGTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSRGVAG*CWSVSV
Trigger: AACACTTACGCTCCAACAGCAACCAGCTACACCCCT...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTTTTAGGTTCTATGGTTaGACTTTTAGCAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPFRFYG*TFSNGG
Trigger: GCCACCATTGCTAAAAGTGCAACCATAGAACCTAAA...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GTTTGTCCAAGAAGGTCATACTGGTTTAGACGTGATCCATCTTCTGCTACAACCTTTAGGTTCTATGGTTaGACTTTTAGCAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: VCPRRSYWFRRDPSSATTFRFYG*TFSNGG
Trigger: GCCACCATTGCTAAAAGTGCAACCATAGAACCTAAA...GGTTGTAGCAGAAGATGGATCACGTCTAAACCAGTATGACCTTCTTGGACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR GCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGACTGCATAGTCTGCTTTaGTCCAGACTGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRLHSLL*SRLPDR
Trigger: CCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGACCAAGCTGCATAGTCTaGTTTGCTCCAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRPSCIV*FAPDCQ
Trigger: CTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTTGCCTCTCACTCACTTaGTCTGAGCCATCATGGACT +
Preference number: 4 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSCLSLT*SEPSWT
Trigger: AGTCCATGATGGCTCAGACCAAGTGAGTGAGAGGCA...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393943.10
ENST00000428797.7
CDS-3UTR CCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRTVRQT*TFPHRG
Trigger: CCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGT...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTACGCTCTCCCAATCCTaGTCTCAGGCGATTGTCATA +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFTLSQS*SQAIVI
Trigger: TATGACAATCGCCTGAGACCAGGATTGGGAGAGCGT...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTATATTCCATATCATaGTCTGAAACGGGTCCGAAA +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPVYSIS*SETGPK
Trigger: TTTCGGACCCGTTTCAGACCATGATATGGAATATAC...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAATCACTGTCAGCCTCATaGTGTACAGCAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKSLSAS*CTARCH
Trigger: ATGGCACCTTGCTGTACACCATGAGGCTGACAGTGA...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTTTTGTCTACATAAGTaGACTTCACACCCATATGTT +
Preference number: 4 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLFCLHK*TSHPYV
Trigger: AACATATGGGTGTGAAGTCCACTTATGTAGACAAAA...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGACGGGTCCGAAACTGGTaGCGAAGATATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRRVRNW*RRYQSS
Trigger: TGAAGACTGATATCTTCGTCACCAGTTTCGGACCCG...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTTCATCCTTCCAGCTTTaGCGGAAAAATACATCTATT +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPSSFQL*RKNTSI
Trigger: AATAGATGTATTTTTCCGTCAAAGCTGGAAGGATGA...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACGTGGGGGCTTTTAGCTaGGGCTCTCTGTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNVGAFS*GSLFKY
Trigger: GTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCAC...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACTGTCTCCTTCTGACATaGCTTTGCTCTTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNCLLLT*LCSFAC
Trigger: GCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACA...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAATGTCTCCTTCTGACATaGCTTTGCTCTTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKCLLLT*LCSFAC
Trigger: GCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACA...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGGGAAATGTGTGGAATaGCTTGAACAGAGAGCAACT +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNGKCVE*LEQRAT
Trigger: AGTTGCTCTCTGTTCAAGTCATTCCACACATTTCCC...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTTGGATAGCAGCTTTTTaGGAAAAACATTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPWIAAF*EKHCSR
Trigger: TCTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCA...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTCTGCCTGCATATGAATaGACGCAAGCTCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFLPAYE*TQALKL
Trigger: CAGTTTCAGAGCTTGCGTTCATTCATATGCAGGCAG...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428797.7
CDS-3UTR TCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATAGTCAAGCCATGTGCTaGTCTCTCTCACATACAAAC +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNSQAMC*SLSHTN
Trigger: GTTTGTATGTGAGAGAGATCAGCACATGGCTTGACT...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637827.1
CDS-3UTR GCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATTCTTCCAGTCAGTGTaGTCAGAAGGAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRFFQSV*SEGGSR
Trigger: CCTGGATCCTCCTTCTGAGCACACTGACTGGAAGAA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAACCAATCCATAGCTGTTaGATAAGCCACCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKPIHSC*ISHLRE
Trigger: CTCCCTAAGGTGGCTTATGCAACAGCTATGGATTGG...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAAGGGGTGTAGCTGGTTaGTGTTGGAGCGTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRRGVAG*CWSVSV
Trigger: AACACTTACGCTCCAACAGCAACCAGCTACACCCCT...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNILSPS*IVCFAP
Trigger: TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGAT...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFILSPS*IVCFAP
Trigger: TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGAT...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTCTTTGCTCTTTCGCTTaGTCTGTCAGAATCCTGTCT +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSLCSFA*SVRILS
Trigger: AGACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAG...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATCTTTGCTCTTTCGCTTaGTCTGTCAGAATCCTGTCT +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNLCSFA*SVRILS
Trigger: AGACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAG...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATCACTGTCAGCCTCATaGTGTACAGCAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRSLSAS*CTARCH
Trigger: ATGGCACCTTGCTGTACACCATGAGGCTGACAGTGA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATCTATTTCACTGTCAGCCTCATaGTGTACAGCAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: NKFPVQRTEQQNVSKRSISLSAS*CTARCH
Trigger: ATGGCACCTTGCTGTACACCATGAGGCTGACAGTGA...AATAGATCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR CCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATTTAGTGGGCAAGCATaGGCATCCATAGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRFSGQA*ASIGKS
Trigger: GGACTTCCCTATGGATGCCCATGCTTGCCCACTAAA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATAGCGTGCTGGCTCTCTaGTCCATTCATAAACAACTT +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNSVLAL*SIHKQL
Trigger: AAGTTGTTTATGAATGGACCAGAGAGCCAGCACGCT...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAGCGTGCTGGCTCTCTaGTCCATTCATAAACAACTT +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSSVLAL*SIHKQL
Trigger: AAGTTGTTTATGAATGGACCAGAGAGCCAGCACGCT...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTATCCTTTACTTTCTTTaGCTTTTCTGGAACCACACT +
Preference number: 4 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPILYFL*LFWNHT
Trigger: AGTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGAT...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATTTTCTTGGGTTCTGGTaGTTTTGTTTCGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNFLGFW*FCFGLD
Trigger: GTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAA...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAATCTATTGATGTGGTGTaGGGGCTTTTAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKSIDVV*GLLAEA
Trigger: AGCCTCAGCTAAAAGCCCCCACACCACATCAATAGA...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTTCTATTGATGTGGTGTaGGGGCTTTTAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFSIDVV*GLLAEA
Trigger: AGCCTCAGCTAAAAGCCCCCACACCACATCAATAGA...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTTCTATTGATGTGGTGTaGGGGCTTTTAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSSIDVV*GLLAEA
Trigger: AGCCTCAGCTAAAAGCCCCCACACCACATCAATAGA...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATACATTGCTCAAGACTTaGGTTTGGATCCCAACTGTC +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNTLLKT*VWIPTV
Trigger: GACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGT...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATTCCATATCATGGTCTaGAACGGGTCCGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRFHIMV*NGSETG
Trigger: ACCAGTTTCGGACCCGTTTCAGACCATGATATGGAA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATGTCTCCTTCTGACATaGCTTTGCTCTTTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRCLLLT*LCSFAC
Trigger: GCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACCATTCTGTCTCCTTCTaGCATGACTTTGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNHSVSF*HDFALS
Trigger: CGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAATG...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTCATTCTGTCTCCTTCTaGCATGACTTTGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFHSVSF*HDFALS
Trigger: CGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAATG...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAACATTCTGTCTCCTTCTaGCATGACTTTGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKHSVSF*HDFALS
Trigger: CGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAATG...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGAAATGTGCTCTACAATaGGCAACTGCACCTTTACGT +
Preference number: 4 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWKCALQ*ATAPLR
Trigger: ACGTAAAGGTGCAGTTGCTCATTGTAGAGCACATTT...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAATGTGCTCTACAATaGGCAACTGCACCTTTACGT +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSKCALQ*ATAPLR
Trigger: ACGTAAAGGTGCAGTTGCTCATTGTAGAGCACATTT...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAAGTGTGTTTAGACCGTaGCTTGTGGATTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRSVFRP*LVDSEH
Trigger: GTGCTCAGAATCCACAAGTCACGGTCTAAACACACT...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCATCATGGACTCTGCGTaGTCCTTTGCTGAAGATTTC +
Preference number: 4 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCIMDSA*SFAEDF
Trigger: GAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGAT...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393943.10
ENST00000428797.7
CDS-3UTR GCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTATCATGGACTCTGCGTaGTCCTTTGCTGAAGATTTC +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFIMDSA*SFAEDF
Trigger: GAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGAT...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR GCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGACCAATCCATAGCTGTTaGATAAGCCACCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRPIHSC*ISHLRE
Trigger: CTCCCTAAGGTGGCTTATGCAACAGCTATGGATTGG...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAATCCTGTCTCCAAGCTaGATAGTCTGCTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRILSPS*IVCFAP
Trigger: TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGAT...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAACTTTGCTCTTTCGCTTaGTCTGTCAGAATCCTGTCT +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKLCSFA*SVRILS
Trigger: AGACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAG...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGACTTCTTTCCATTGTaGAAAAATGTGTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNDFFPL*KNVSGV
Trigger: GACTCCGGACACATTTTTCCACAATGGAAAGAAGTC...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGCGTGCTGGCTCTCTaGTCCATTCATAAACAACTT +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKSVLAL*SIHKQL
Trigger: AAGTTGTTTATGAATGGACCAGAGAGCCAGCACGCT...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATCCAAGAAGGTCATACTaGTTTAGACGTGATCCATCT +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNPRRSY*FRRDPS
Trigger: AGATGGATCACGTCTAAACCAGTATGACCTTCTTGG...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATTCTCCTGTACTTGACTaGACAATTCCAGAGTCTACT +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNSPVLD*TIPEST
Trigger: AGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGA...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGGTAGCTGGTTGCTGTTaGAGCGTAAGTGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWVAGCC*SVSVVF
Trigger: AAAAACAACACTTACGCTCCAACAGCAACCAGCTAC...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTGTAGCTGGTTGCTGTTaGAGCGTAAGTGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSVAGCC*SVSVVF
Trigger: AAAAACAACACTTACGCTCCAACAGCAACCAGCTAC...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAATTTCTTGGGTTCTGGTaGTTTTGTTTCGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKFLGFW*FCFGLD
Trigger: GTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAA...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTTTTCTTGGGTTCTGGTaGTTTTGTTTCGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFFLGFW*FCFGLD
Trigger: GTCAAGCCCGAAACAAAACCACCAGAACCCAAGAAA...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCGAAGCAATGGAAACCTaGACCATCCATTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCEAMET*TIHSPL
Trigger: AAGTGGAGAATGGATGGTCCAGGTTTCCATTGCTTC...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS-3UTR TCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAATATTCTCCTGTACTTaGCTGGACAATTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKIFSCT*LDNSRV
Trigger: GACTCTGGAATTGTCCAGTCAAGTACAGGAGAATAT...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTATATTCTCCTGTACTTaGCTGGACAATTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFIFSCT*LDNSRV
Trigger: GACTCTGGAATTGTCCAGTCAAGTACAGGAGAATAT...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAACCAGAAGGAGACTTGTaGGAGAATCACTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKPEGDL*ENHCHY
Trigger: ATAATGACAGTGATTCTCTCACAAGTCTCCTTCTGG...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGACATTCTGTCTCCTTCTaGCATGACTTTGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRHSVSF*HDFALS
Trigger: CGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAATG...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp CAACATATTCTCCTGTACTTGACTGGACAATTCCAGAGTCTACTGTTTGTCCAATTTTTCTTGTATCTTTaGACCATCTTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QHILLYLTGQFQSLLFVQFFLYL*TIFPLF
Trigger: AAAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAA...TTGGACAAACAGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR GCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTTTTAGGTTCTATGGTTaGACTTTTAGCAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSFRFYG*TFSNGG
Trigger: GCCACCATTGCTAAAAGTGCAACCATAGAACCTAAA...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGTTTAGGTTCTATGGTTaGACTTTTAGCAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWFRFYG*TFSNGG
Trigger: GCCACCATTGCTAAAAGTGCAACCATAGAACCTAAA...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGACTTTGCTCTTTCGCTTaGTCTGTCAGAATCCTGTCT +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRLCSFA*SVRILS
Trigger: AGACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAG...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAAGCGTGCTGGCTCTCTaGTCCATTCATAAACAACTT +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRSVLAL*SIHKQL
Trigger: AAGTTGTTTATGAATGGACCAGAGAGCCAGCACGCT...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTCCAAGAAGGTCATACTaGTTTAGACGTGATCCATCT +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFPRRSY*FRRDPS
Trigger: AGATGGATCACGTCTAAACCAGTATGACCTTCTTGG...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTTCTCCTGTACTTGACTaGACAATTCCAGAGTCTACT +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFSPVLD*TIPEST
Trigger: AGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGA...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACGTAGCTGGTTGCTGTTaGAGCGTAAGTGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNVAGCC*SVSVVF
Trigger: AAAAACAACACTTACGCTCCAACAGCAACCAGCTAC...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTGTAGCTGGTTGCTGTTaGAGCGTAAGTGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFVAGCC*SVSVVF
Trigger: AAAAACAACACTTACGCTCCAACAGCAACCAGCTAC...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGGCAAATATCATATCATaGTCTGAAACGGGTCCGAAA +
Preference number: 4 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWANIIS*SETGPK
Trigger: TTTCGGACCCGTTTCAGACCATGATATGATATTTGC...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637044.1
3UTR CAA 72 bp CCTATATCATTGGATAGCAGCTTTTTGAGAAAAACATaGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTA +
Preference number: 4 (lower is better)
Translates to: PISLDSSFLRKT*LKTWVWIPTVL
Trigger: TAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCAATGATATAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTTCATCCTTCCAGCTTTaGCGGAAAAATACATCTATT +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSSSFQL*RKNTSI
Trigger: AATAGATGTATTTTTCCGTCAAAGCTGGAAGGATGA...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTCTCTTCAAGTGGAAATaGGTGGTCATAACAACATAT +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSLFKWK*VVITTY
Trigger: ATATGTTGTTATGACCACTCATTTCCACTTGAAGAG...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATCTCTTCAAGTGGAAATaGGTGGTCATAACAACATAT +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNLFKWK*VVITTY
Trigger: ATATGTTGTTATGACCACTCATTTCCACTTGAAGAG...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGACCAGAAGGAGACTTGTaGGAGAATCACTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRPEGDL*ENHCHY
Trigger: ATAATGACAGTGATTCTCTCACAAGTCTCCTTCTGG...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATTGGATAGCAGCTTTTTaGGAAAAACATTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNWIAAF*EKHCSR
Trigger: TCTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCA...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTTCTACAATGAGCAACTaGACCTTTACGTATGAAAGT +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSSTMSN*TFTYES
Trigger: ACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGA...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGCATGTTAGGTTTTATTaGCACTTCACTGCACTAAAG +
Preference number: 4 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWHVRFY*HFTALK
Trigger: CTTTAGTGCAGTGAAGTGGCAATAAAACCTAACATG...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTGTATATTCCATATCATaGTCTGAAACGGGTCCGAAA +
Preference number: 4 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSVYSIS*SETGPK
Trigger: TTTCGGACCCGTTTCAGACCATGATATGGAATATAC...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000638159.1
CDS-3UTR CCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACGTATATTCCATATCATaGTCTGAAACGGGTCCGAAA +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNVYSIS*SETGPK
Trigger: TTTCGGACCCGTTTCAGACCATGATATGGAATATAC...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000638159.1
CDS-3UTR CCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGACCAAGAAGGTCATACTaGTTTAGACGTGATCCATCT +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRPRRSY*FRRDPS
Trigger: AGATGGATCACGTCTAAACCAGTATGACCTTCTTGG...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTATCCTTTACTTTCTTTaGCTTTTCTGGAACCACACT +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSILYFL*LFWNHT
Trigger: AGTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGAT...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATATCCTTTACTTTCTTTaGCTTTTCTGGAACCACACT +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNILYFL*LFWNHT
Trigger: AGTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGAT...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAGTAGCTGGTTGCTGTTaGAGCGTAAGTGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRVAGCC*SVSVVF
Trigger: AAAAACAACACTTACGCTCCAACAGCAACCAGCTAC...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATCTATTGTAGCTGGTTGCTGTTaGAGCGTAAGTGTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: NKFPVQRTEQQNVSKRSIVAGCC*SVSVVF
Trigger: AAAAACAACACTTACGCTCCAACAGCAACCAGCTAC...AATAGATCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR CCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTTTAGACCGTGACTTGTaGATTCTGAGCACTAAATTT +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSLDRDL*ILSTKF
Trigger: AAATTTAGTGCTCAGAATCCACAAGTCACGGTCTAA...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATTTAGACCGTGACTTGTaGATTCTGAGCACTAAATTT +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNLDRDL*ILSTKF
Trigger: AAATTTAGTGCTCAGAATCCACAAGTCACGGTCTAA...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCCTCAAGACTTGGGTTTaGATCCCAACTGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCLKTWV*IPTVLF
Trigger: AAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAG...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATTGTCTATGTTATCATaGAGAAAACGCAGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRLSMLS*RKRRRC
Trigger: ACAGCGCCTGCGTTTTCTCCATGATAACATAGACAA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS-3UTR TCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACTCATCCTTCCAGCTTTaGCGGAAAAATACATCTATT +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNSSFQL*RKNTSI
Trigger: AATAGATGTATTTTTCCGTCAAAGCTGGAAGGATGA...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACCTCTTCAAGTGGAAATaGGTGGTCATAACAACATAT +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNLFKWK*VVITTY
Trigger: ATATGTTGTTATGACCACTCATTTCCACTTGAAGAG...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAATTTTTCTTGTATCTTTaGACCATCTTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKFFLYL*TIFPLF
Trigger: AAAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAA...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR TCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTTGGATAGCAGCTTTTTaGGAAAAACATTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFWIAAF*EKHCSR
Trigger: TCTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCA...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAGAATCACTGTCATTATaGATGGCAGGTATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKESLSL*MAGMFE
Trigger: TTCAAACATACCTGCCATGCATAATGACAGTGATTC...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTTCTACAATGAGCAACTaGACCTTTACGTATGAAAGT +
Preference number: 4 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSSTMSN*TFTYES
Trigger: ACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGA...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTATTCCAACAGCTAAGTaGAGTGATTCTTACACAATA +
Preference number: 4 (lower is better)
Translates to: VENINKFPVQRTEQQNVSIPTAK*SDSYTI
Trigger: TATTGTGTAAGAATCACTGCACTTAGCTGTTGGAAT...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTCATGTGGTTCATACTTaGTGTTCTGTTCTTAAATGC +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFHVVHT*CSVLKC
Trigger: GCATTTAAGAACAGAACAGCAAGTATGAACCACATG...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACCATGTGGTTCATACTTaGTGTTCTGTTCTTAAATGC +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNHVVHT*CSVLKC
Trigger: GCATTTAAGAACAGAACAGCAAGTATGAACCACATG...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATTTCACTGCACTAAAGTaGAATAAACATTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: YCVENINKFPVQRTEQQNFTALK*NKHSVS
Trigger: TGACACTGAATGTTTATTGCACTTTAGTGCAGTGAA...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAACATGTTAGGTTTTATTaGCACTTCACTGCACTAAAG +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKHVRFY*HFTALK
Trigger: CTTTAGTGCAGTGAAGTGGCAATAAAACCTAACATG...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTCATGTTAGGTTTTATTaGCACTTCACTGCACTAAAG +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFHVRFY*HFTALK
Trigger: CTTTAGTGCAGTGAAGTGGCAATAAAACCTAACATG...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTATCCTTTACTTTCTTTaGCTTTTCTGGAACCACACT +
Preference number: 4 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSILYFL*LFWNHT
Trigger: AGTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGAT...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCATCCTTTACTTTCTTTaGCTTTTCTGGAACCACACT +
Preference number: 4 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCILYFL*LFWNHT
Trigger: AGTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGAT...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAATCCTTTACTTTCTTTaGCTTTTCTGGAACCACACT +
Preference number: 4 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKILYFL*LFWNHT
Trigger: AGTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGAT...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACTTAGACCGTGACTTGTaGATTCTGAGCACTAAATTT +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNLDRDL*ILSTKF
Trigger: AAATTTAGTGCTCAGAATCCACAAGTCACGGTCTAA...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR TCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATTTTTCTTGTATCTTTaGACCATCTTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRFFLYL*TIFPLF
Trigger: AAAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAGAATCACTGTCATTATaGATGGCAGGTATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRESLSL*MAGMFE
Trigger: TTCAAACATACCTGCCATGCATAATGACAGTGATTC...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGACATGTGGTTCATACTTaGTGTTCTGTTCTTAAATGC +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRHVVHT*CSVLKC
Trigger: GCATTTAAGAACAGAACAGCAAGTATGAACCACATG...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTTTCACTGCACTAAAGTaGAATAAACATTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSFTALK*NKHSVS
Trigger: TGACACTGAATGTTTATTGCACTTTAGTGCAGTGAA...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACTTCACTGCACTAAAGTaGAATAAACATTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNFTALK*NKHSVS
Trigger: TGACACTGAATGTTTATTGCACTTTAGTGCAGTGAA...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAATCCTTTACTTTCTTTaGCTTTTCTGGAACCACACT +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRILYFL*LFWNHT
Trigger: AGTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGAT...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CCA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTTTTTGTCTACATAAGTaGACTTCACACCCATATGTT +
Preference number: 4 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFFCLHK*TSHPYV
Trigger: AACATATGGGTGTGAAGTCCACTTATGTAGACAAAA...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
36% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR GCA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAATTCCAACAGCTAAGTaGAGTGATTCTTACACAATA +
Preference number: 4 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRIPTAK*SDSYTI
Trigger: TATTGTGTAAGAATCACTGCACTTAGCTGTTGGAAT...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS GCA 90 bp AGTCTGGGAGAGAGAATCGTGGAGAGACTGGAGCCAGCGCGAGTCTaGGAGTCCGAGTCCGGGCGCGCCAGAGCAGAGGGGCGTCCTCGC +
Preference number: 5 (lower is better)
Translates to: SLGERIVERLEPARV*ESESGRARAEGRPR
Trigger: GCGAGGACGCCCCTCTGCTCTGGCGCGCCCGGACTCGGACTCGCAGACTCGCGCTGGCTCCAGTCTCTCCACGATTCTCTCTCCCAGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000635096.1
ENST00000635916.2
ENST00000637044.1
ENST00000638112.1
CDS GCA 90 bp CTCATCGCGGGCTGGAGCAGCTGCTGTGGGATCAGGCTCCTGTCCTaGTCGCTCCCTTGCTCGCTCGCTCGCTCTCCTTCTTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: LIAGWSSCCGIRLLS*SLPCSLARSPSSLS
Trigger: AGAGAGAGAAGAAGGAGAGCGAGCGAGCGAGCAAGGGAGCGAGCAGGACAGGAGCCTGATCCCACAGCAGCTGCTCCAGCCCGCGATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS GCA 90 bp TGGAGCAGCTGCTGTGGGATCAGGCTCCTGTCCTGCTCGCTCCCTTaGTCGCTCGCTCGCTCTCCTTCTTCTCTCTCTCTCTCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: WSSCCGIRLLSCSLP*SLARSPSSLSLSLP
Trigger: GGGGAGAGAGAGAGAGAGAGAAGAAGGAGAGCGAGCGAGCGAGCAAGGGAGCGAGCAGGACAGGAGCCTGATCCCACAGCAGCTGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS GCA 90 bp CAGTCAGACAGACCTGGACTTTTCCTCATCGCGGGCTGGAGCAGCTaGTGTGGGATCAGGCTCCTGTCCTGCTCGCTCCCTTGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: QSDRPGLFLIAGWSS*CGIRLLSCSLPCSL
Trigger: GAGCGAGCAAGGGAGCGAGCAGGACAGGAGCCTGATCCCACAGCAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS GCA 90 bp GCCCAAAGACAGTCAGACAGACCTGGACTTTTCCTCATCGCGGGCTaGTGTGGGATCAGGCTCCTGTCCTGCTCGCTCCCTTGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: AQRQSDRPGLFLIAG*CGIRLLSCSLPCSL
Trigger: GAGCGAGCAAGGGAGCGAGCAGGACAGGAGCCTGATCCCACAGCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519621.2
CDS CCA 90 bp TGTGCTCAGAAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCTAAGGCCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: CAQKEDPGPKTVRQT*TFPHRGLEQLRPPL
Trigger: CAGAGGGGGCCTTAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTTCTGAGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000635096.1
ENST00000635916.2
ENST00000636340.1
ENST00000637044.1
ENST00000638112.1
CDS CCA 90 bp TGTGCTCAGAAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCTGCTGTGGGATCAG +
Preference number: 5 (lower is better)
Translates to: CAQKEDPGPKTVRQT*TFPHRGLEQLLWDQ
Trigger: CTGATCCCACAGCAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTTCTGAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS CCA 90 bp TGTGCTCAGAAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGCTGTGGGATCAGGCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: CAQKEDPGPKTVRQT*TFPHRGLLWDQAPV
Trigger: GACAGGAGCCTGATCCCACAGCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTTCTGAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519621.2
CDS CCA 90 bp TGTGCTCAGAAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCATCCCATGCCATCC +
Preference number: 5 (lower is better)
Translates to: CAQKEDPGPKTVRQT*TFPHRGLEQHPMPS
Trigger: GGATGGCATGGGATGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTTCTGAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521339.5
CDS TCA 90 bp CCAGAGCAGAGGGGCGTCCTCGCTCTGCCTCTCACTCACTTGGTCTaGGCCATCATGGACTCTGCGTGCTCCTTTGCTGAAGATTTCACA +
Preference number: 5 (lower is better)
Translates to: PEQRGVLALPLTHLV*AIMDSACSFAEDFT
Trigger: TGTGAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGATGGCTCAGACCAAGTGAGTGAGAGGCAGAGCGAGGACGCCCCTCTGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000635096.1
ENST00000635916.2
ENST00000638112.1
CDS-3UTR CAA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTGTCCTGCTCGCTCCCTaGCTCGCTCGCTCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLVLLAP*LARSLS
Trigger: GGAGAGCGAGCGAGCGAGCAAGGGAGCGAGCAGGAC...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS CCA 90 bp TGTGCTCAGAAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGTGGGATATGACACCT +
Preference number: 5 (lower is better)
Translates to: CAQKEDPGPKTVRQT*TFPHRGLEQWDMTP
Trigger: AGGTGTCATATCCCACTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTTCTGAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635880.1
CDS CCA 90 bp TGTGCTCAGAAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCCTGCGGAATACATT +
Preference number: 5 (lower is better)
Translates to: CAQKEDPGPKTVRQT*TFPHRGLEQPAEYI
Trigger: AATGTATTCCGCAGGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTTCTGAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636573.1
CDS CCA 90 bp GGGGCGTCCTCGCTCTGCCTCTCACTCACTTGGTCTGAGCCATCATaGACTCTGCGTGCTCCTTTGCTGAAGATTTCACACCCAAATTTG +
Preference number: 5 (lower is better)
Translates to: GASSLCLSLTWSEPS*TLRAPLLKISHPNL
Trigger: CAAATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGATGGCTCAGACCAAGTGAGTGAGAGGCAGAGCGAGGACGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000635096.1
ENST00000635916.2
ENST00000638112.1
CDS CCA 90 bp TGTGCTCAGAAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCTTGATTTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: CAQKEDPGPKTVRQT*TFPHRGLEQLDFRS
Trigger: GCTTCTGAAATCAAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTTCTGAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637827.1
CDS CCA 90 bp TGTGCTCAGAAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCTCATTGGAAGCAAT +
Preference number: 5 (lower is better)
Translates to: CAQKEDPGPKTVRQT*TFPHRGLEQLIGSN
Trigger: ATTGCTTCCAATGAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTTCTGAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS CCA 90 bp TCCTCATCGCGGGCTGGAGCAGCTCACTGGGATATGACACCTCATTaGAAGCAATGGAAACCTGGACCATCCATTCTCCACTTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: SSSRAGAAHWDMTPH*KQWKPGPSILHFPF
Trigger: GAAGGGAAAGTGGAGAATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGGTGTCATATCCCAGTGAGCTGCTCCAGCCCGCGATGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522651.6
CDS-3UTR CAA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCGGCTGGAGCAGCTCATaGGAAGCAATGGAAACCTGG +
Preference number: 5 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCGWSSS*EAMETW
Trigger: CCAGGTTTCCATTGCTTCCAATGAGCTGCTCCAGCC...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS CCA 90 bp CGGGCTGGAGCAGCTCACTGGGATATGACACCTCATTGGAAGCAATaGAAACCTGGACCATCCATTCTCCACTTTCCCTTCCATTTCTCC +
Preference number: 5 (lower is better)
Translates to: RAGAAHWDMTPHWKQ*KPGPSILHFPFHFS
Trigger: GGAGAAATGGAAGGGAAAGTGGAGAATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGGTGTCATATCCCAGTGAGCTGCTCCAGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522651.6
CDS CCA 90 bp CATCGCGGGCTGGAGCAGTGGGATATGACACCTCATTGGAAGCAATaGAAACCTGGACCATCCATTCTCCACTTTCCCTTCCATTTCTCC +
Preference number: 5 (lower is better)
Translates to: HRGLEQWDMTPHWKQ*KPGPSILHFPFHFS
Trigger: GGAGAAATGGAAGGGAAAGTGGAGAATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGGTGTCATATCCCACTGCTCCAGCCCGCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635880.1
CDS CCA 90 bp TGTGCTCAGAAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCTGAAAAGTAGAATA +
Preference number: 5 (lower is better)
Translates to: CAQKEDPGPKTVRQT*TFPHRGLEQLKSRI
Trigger: TATTCTACTTTTCAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTTCTGAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634335.1
CDS-3UTR CAA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTTGGGCATGGTCATGTaGTGGGCCACTGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCLGMVM*WATDFF
Trigger: AAAGAAGTCAGTGGCCCACAACATGACCATGCCCAA...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTTTGGGCATGGTCATGTaGTGGGCCACTGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGLGMVM*WATDFF
Trigger: AAAGAAGTCAGTGGCCCACAACATGACCATGCCCAA...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTTGGGCATGGTCATGTaGTGGGCCACTGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDLGMVM*WATDFF
Trigger: AAAGAAGTCAGTGGCCCACAACATGACCATGCCCAA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTTGGGCATGGTCATGTaGTGGGCCACTGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCLGMVM*WATDFF
Trigger: AAAGAAGTCAGTGGCCCACAACATGACCATGCCCAA...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTACTTTGCTCTTTCGCTaGCTCTGTCAGAATCCTGTC +
Preference number: 5 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSTLLFR*LCQNPV
Trigger: GACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAGT...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTACTTTGCTCTTTCGCTaGCTCTGTCAGAATCCTGTC +
Preference number: 5 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCTLLFR*LCQNPV
Trigger: GACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAGT...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCCTTCTGACATGACTTaGCTCTTTCGCTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGPSDMT*LFRLLC
Trigger: ACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGG...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCGCGGGCTGGAGCAGCTaGATTTCAGAAGCAACTGTA +
Preference number: 5 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSAGWSS*ISEATV
Trigger: TACAGTTGCTTCTGAAATCAAGCTGCTCCAGCCCGC...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637827.1
CDS-3UTR CAA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATATCTGCAGCTCTGAATaGTGCTGGGTTCCTGGACGA +
Preference number: 5 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNICSSE*CWVPGR
Trigger: TCGTCCAGGAACCCAGCACAATTCAGAGCTGCAGAT...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000023897.10
CDS-3UTR CAA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGACTCTGCGTGCTCCTTaGCTGAAGATTTCACACCCA +
Preference number: 5 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLTLRAP*LKISHP
Trigger: TGGGTGTGAAATCTTCAGCAAAGGAGCACGCAGAGT...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR CAA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGTTGGGCATGGTCATGTaGTGGGCCACTGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLLGMVM*WATDFF
Trigger: AAAGAAGTCAGTGGCCCACAACATGACCATGCCCAA...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCATTGGGCATGGTCATGTaGTGGGCCACTGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: FACSVRILSPSCIVCFAPLGMVM*WATDFF
Trigger: AAAGAAGTCAGTGGCCCACAACATGACCATGCCCAA...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCCAGAGTCTACTGTTaGTCCAAGAAGGTCATACTG +
Preference number: 5 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCSRVYC*SKKVIL
Trigger: CAGTATGACCTTCTTGGACAAACAGTAGACTCTGGA...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTTGTAGCTGGTTGCTGTaGGAGCGTAAGTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGCSWLL*ERKCCF
Trigger: AAAACAACACTTACGCTCCAACAGCAACCAGCTACA...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTGGTTTTGTTTCGGGCTaGACCTCTTTAGGTTCTATG +
Preference number: 5 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCGFVSG*TSLGSM
Trigger: CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACC...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTGGTTTTGTTTCGGGCTaGACCTCTTTAGGTTCTATG +
Preference number: 5 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSGFVSG*TSLGSM
Trigger: CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACC...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCGCGGGAAGGCTATTCTaGACAGTCGGTCAATTTTGC +
Preference number: 5 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSAGRLF*TVGQFC
Trigger: GCAAAATTGACCGACTGTCAAGAATAGCCTTCCCGC...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGCGGGAAGGCTATTCTaGACAGTCGGTCAATTTTGC +
Preference number: 5 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCAGRLF*TVGQFC
Trigger: GCAAAATTGACCGACTGTCAAGAATAGCCTTCCCGC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGGCGGGAAGGCTATTCTaGACAGTCGGTCAATTTTGC +
Preference number: 5 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLAGRLF*TVGQFC
Trigger: GCAAAATTGACCGACTGTCAAGAATAGCCTTCCCGC...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCACTTTGCTCTTTCGCTaGCTCTGTCAGAATCCTGTC +
Preference number: 5 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCTLLFR*LCQNPV
Trigger: GACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAGT...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAGGATATGACACCTCATaGGAAGCAATGGAAACCTGG +
Preference number: 5 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRGYDTS*EAMETW
Trigger: CCAGGTTTCCATTGCTTCCAATGAGGTGTCATATCC...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635880.1
CDS-3UTR CAA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTACTCTGCGTGCTCCTTaGCTGAAGATTTCACACCCA +
Preference number: 5 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLTLRAP*LKISHP
Trigger: TGGGTGTGAAATCTTCAGCAAAGGAGCACGCAGAGT...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR CAA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTACTGACTTCTTTCCATaGTGGAAAAATGTGTCCGGA +
Preference number: 5 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCTDFFP*WKNVSG
Trigger: TCCGGACACATTTTTCCACAATGGAAAGAAGTCAGT...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATTTGGGCATGGTCATGTaGTGGGCCACTGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNLGMVM*WATDFF
Trigger: AAAGAAGTCAGTGGCCCACAACATGACCATGCCCAA...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCATATTCTCCTGTACTaGACTGGACAATTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGHILLY*TGQFQS
Trigger: ACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATG...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTGATCCTTTACTTTCTTaGGCTTTTCTGGAACCACAC +
Preference number: 5 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGDPLLS*AFLEPH
Trigger: GTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGATC...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGATGTAGCTGGTTGCTGTaGGAGCGTAAGTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRCSWLL*ERKCCF
Trigger: AAAACAACACTTACGCTCCAACAGCAACCAGCTACA...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAGGTTTTGTTTCGGGCTaGACCTCTTTAGGTTCTATG +
Preference number: 5 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRGFVSG*TSLGSM
Trigger: CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACC...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTGACAGTCGGTCAATTTaGCTGACACTGTTAAAGGTT +
Preference number: 5 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCDSRSI*LTLLKV
Trigger: AACCTTTAACAGTGTCAGCAAAATTGACCGACTGTC...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTGCGGGAAGGCTATTCTaGACAGTCGGTCAATTTTGC +
Preference number: 5 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLAGRLF*TVGQFC
Trigger: GCAAAATTGACCGACTGTCAAGAATAGCCTTCCCGC...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGACTTTGCTCTTTCGCTaGCTCTGTCAGAATCCTGTC +
Preference number: 5 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLTLLFR*LCQNPV
Trigger: GACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAGT...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCACCTTCTGACATGACTTaGCTCTTTCGCTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: FACSVRILSPSCIVCFAPPSDMT*LFRLLC
Trigger: ACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGG...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTACCTTCTGACATGACTTaGCTCTTTCGCTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLPSDMT*LFRLLC
Trigger: ACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGG...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCTTCTGACATGACTTaGCTCTTTCGCTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLPSDMT*LFRLLC
Trigger: ACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGG...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTAATGTGTGGAATGACTaGAACAGAGAGCAACTGATC +
Preference number: 5 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGNVWND*NREQLI
Trigger: GATCAGTTGCTCTCTGTTCAAGTCATTCCACACATT...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTTGTTTAGACCGTGACTaGTGGATTCTGAGCACTAAA +
Preference number: 5 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGCLDRD*WILSTK
Trigger: TTTAGTGCTCAGAATCCACAAGTCACGGTCTAAACA...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTGTTTAGACCGTGACTaGTGGATTCTGAGCACTAAA +
Preference number: 5 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSCLDRD*WILSTK
Trigger: TTTAGTGCTCAGAATCCACAAGTCACGGTCTAAACA...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAAACATTGCTCAAGACTaGGGTTTGGATCCCAACTGT +
Preference number: 5 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRNIAQD*GLDPNC
Trigger: ACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTT...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAATAGAAATGCAGTCATaGCGTAGCAGGAAGCAGACT +
Preference number: 5 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRIEMQS*RSRKQT
Trigger: AGTCTGCTTCCTGCTACGCAATGACTGCATTTCTAT...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS TCA 90 bp GATCAAATATTAAACCACTGCCTGCATATGAATGAACGCAAGCTCTaGAACTGGGAGATGCAGGGTTACACGTGTGGGGAGAGCACTCGT +
Preference number: 5 (lower is better)
Translates to: DQILNHCLHMNERKL*NWEMQGYTCGESTR
Trigger: ACGAGTGCTCTCCCCACACGTGTAACCCTGCATCTCCCAGTTTCAGAGCTTGCGTTCATTCATATGCAGGCAGTGGTTTAATATTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428797.7
ENST00000635916.2
CDS-3UTR CAA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACACTGACTTCTTTCCATaGTGGAAAAATGTGTCCGGA +
Preference number: 5 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDTDFFP*WKNVSG
Trigger: TCCGGACACATTTTTCCACAATGGAAAGAAGTCAGT...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAACTGACTTCTTTCCATaGTGGAAAAATGTGTCCGGA +
Preference number: 5 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRTDFFP*WKNVSG
Trigger: TCCGGACACATTTTTCCACAATGGAAAGAAGTCAGT...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCACTGACTTCTTTCCATaGTGGAAAAATGTGTCCGGA +
Preference number: 5 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCTDFFP*WKNVSG
Trigger: TCCGGACACATTTTTCCACAATGGAAAGAAGTCAGT...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GGCCAAATTAGGGGTGTAGCTGGTTGCTGTTGGAGCGTAAGTGTTGTTTTTCTTTTGGGCATGGTCATGTaGTGGGCCACTGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: GQIRGVAGCCWSVSVVFLLGMVM*WATDFF
Trigger: AAAGAAGTCAGTGGCCCACAACATGACCATGCCCAA...AAGAAAAACAACACTTACGCTCCAACAGCAACCAGCTACACCCCTAATTTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR CAA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGTCCAGAGTCTACTGTTaGTCCAAGAAGGTCATACTG +
Preference number: 5 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLSRVYC*SKKVIL
Trigger: CAGTATGACCTTCTTGGACAAACAGTAGACTCTGGA...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCATCCAGAGTCTACTGTTaGTCCAAGAAGGTCATACTG +
Preference number: 5 (lower is better)
Translates to: FACSVRILSPSCIVCFAPSRVYC*SKKVIL
Trigger: CAGTATGACCTTCTTGGACAAACAGTAGACTCTGGA...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATCCAGAGTCTACTGTTaGTCCAAGAAGGTCATACTG +
Preference number: 5 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLSRVYC*SKKVIL
Trigger: CAGTATGACCTTCTTGGACAAACAGTAGACTCTGGA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACATATTCTCCTGTACTaGACTGGACAATTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRHILLY*TGQFQS
Trigger: ACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATG...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCGATCCTTTACTTTCTTaGGCTTTTCTGGAACCACAC +
Preference number: 5 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCDPLLS*AFLEPH
Trigger: GTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGATC...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATGTAGCTGGTTGCTGTaGGAGCGTAAGTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLCSWLL*ERKCCF
Trigger: AAAACAACACTTACGCTCCAACAGCAACCAGCTACA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCATGTAGCTGGTTGCTGTaGGAGCGTAAGTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: FACSVRILSPSCIVCFAPCSWLL*ERKCCF
Trigger: AAAACAACACTTACGCTCCAACAGCAACCAGCTACA...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCTGTAGCTGGTTGCTGTaGGAGCGTAAGTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSCSWLL*ERKCCF
Trigger: AAAACAACACTTACGCTCCAACAGCAACCAGCTACA...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGGTTTTGTTTCGGGCTaGACCTCTTTAGGTTCTATG +
Preference number: 5 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCGFVSG*TSLGSM
Trigger: CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGGGTTTTGTTTCGGGCTaGACCTCTTTAGGTTCTATG +
Preference number: 5 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLGFVSG*TSLGSM
Trigger: CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACC...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTCTGTTAAAGGTTTTCTaGGGTTCTGGTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSLLKVF*GSGGFV
Trigger: AACAAAACCACCAGAACCCAAGAAAACCTTTAACAG...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTCTGTTAAAGGTTTTCTaGGGTTCTGGTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCLLKVF*GSGGFV
Trigger: AACAAAACCACCAGAACCCAAGAAAACCTTTAACAG...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACGACAGTCGGTCAATTTaGCTGACACTGTTAAAGGTT +
Preference number: 5 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDDSRSI*LTLLKV
Trigger: AACCTTTAACAGTGTCAGCAAAATTGACCGACTGTC...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCGACAGTCGGTCAATTTaGCTGACACTGTTAAAGGTT +
Preference number: 5 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCDSRSI*LTLLKV
Trigger: AACCTTTAACAGTGTCAGCAAAATTGACCGACTGTC...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTACTTTGCTCTTTCGCTaGCTCTGTCAGAATCCTGTC +
Preference number: 5 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLTLLFR*LCQNPV
Trigger: GACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAGT...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATCCTTCTGACATGACTTaGCTCTTTCGCTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNPSDMT*LFRLLC
Trigger: ACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGG...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTCTTTTTCTTGTATCTTaGAACCATCTTCCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: PSCIVCFAPDCQTGVSCSLFLVS*NHLPPL
Trigger: AAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAAG...AGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTTTTTCTTGTATCTTaGAACCATCTTCCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: NPVSKLHSLLCSRLPDRGLFLVS*NHLPPL
Trigger: AAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAAG...ACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAAATGTGTGGAATGACTaGAACAGAGAGCAACTGATC +
Preference number: 5 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRNVWND*NREQLI
Trigger: GATCAGTTGCTCTCTGTTCAAGTCATTCCACACATT...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGCTCAAGACTTGGGTTaGGATCCCAACTGTCTTATT +
Preference number: 5 (lower is better)
Translates to: FACSVRILSPSCIVCFAPAQDLG*DPNCLI
Trigger: AATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGC...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAAACATTGCTCAAGACTaGGGTTTGGATCCCAACTGT +
Preference number: 5 (lower is better)
Translates to: FACSVRILSPSCIVCFAPNIAQD*GLDPNC
Trigger: ACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTT...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAATAGAAATGCAGTCATaGCGTAGCAGGAAGCAGACT +
Preference number: 5 (lower is better)
Translates to: FACSVRILSPSCIVCFAPIEMQS*RSRKQT
Trigger: AGTCTGCTTCCTGCTACGCAATGACTGCATTTCTAT...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCATCCAATCTGCAGCTTaGGAGGCAACTGTTTGTCTA +
Preference number: 5 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCIQSAA*EATVCL
Trigger: TAGACAAACAGTTGCCTCCAAAGCTGCAGATTGGAT...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS TCA 90 bp GTGTCCTTATTCTCCATCCCATGCCATCCATATCAAAGACTAAGTTaGGTTTTCGTGTTCAGAATGGGAGAGACCCCTACACAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: VSLFSIPCHPYQRLS*VFVFRMGETPTQEG
Trigger: GCCCTCTTGTGTAGGGGTCTCTCCCATTCTGAACACGAAAACTCAACTTAGTCTTTGATATGGATGGCATGGGATGGAGAATAAGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS-3UTR CAA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTACTCTGCGTGCTCCTTaGCTGAAGATTTCACACCCA +
Preference number: 5 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPTLRAP*LKISHP
Trigger: TGGGTGTGAAATCTTCAGCAAAGGAGCACGCAGAGT...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR CAA 90 bp TCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTGTGAAGACAGTGGTATaGTCTTTAAGTTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: SPSCIVCFAPDCQTGVSCVKTVV*SLSSSC
Trigger: ACAAGATGAACTTAAAGACAATACCACTGTCTTCAC...ACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAACTGACTTCTTTCCATaGTGGAAAAATGTGTCCGGA +
Preference number: 5 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLTDFFP*WKNVSG
Trigger: TCCGGACACATTTTTCCACAATGGAAAGAAGTCAGT...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAACTGACTTCTTTCCATaGTGGAAAAATGTGTCCGGA +
Preference number: 5 (lower is better)
Translates to: FACSVRILSPSCIVCFAPTDFFP*WKNVSG
Trigger: TCCGGACACATTTTTCCACAATGGAAAGAAGTCAGT...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCACTGACTTCTTTCCATaGTGGAAAAATGTGTCCGGA +
Preference number: 5 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSTDFFP*WKNVSG
Trigger: TCCGGACACATTTTTCCACAATGGAAAGAAGTCAGT...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTCCAGAGTCTACTGTTaGTCCAAGAAGGTCATACTG +
Preference number: 5 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLSRVYC*SKKVIL
Trigger: CAGTATGACCTTCTTGGACAAACAGTAGACTCTGGA...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCCATATTCTCCTGTACTaGACTGGACAATTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCHILLY*TGQFQS
Trigger: ACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATG...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCCATATTCTCCTGTACTaGACTGGACAATTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSHILLY*TGQFQS
Trigger: ACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATG...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTACATATTCTCCTGTACTaGACTGGACAATTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLHILLY*TGQFQS
Trigger: ACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATG...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCACATATTCTCCTGTACTaGACTGGACAATTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: FACSVRILSPSCIVCFAPHILLY*TGQFQS
Trigger: ACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATG...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCATATTCTCCTGTACTaGACTGGACAATTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLHILLY*TGQFQS
Trigger: ACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATG...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGATCCTTTACTTTCTTaGGCTTTTCTGGAACCACAC +
Preference number: 5 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCDPLLS*AFLEPH
Trigger: GTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGATC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCGATCCTTTACTTTCTTaGGCTTTTCTGGAACCACAC +
Preference number: 5 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSDPLLS*AFLEPH
Trigger: GTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGATC...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGATCCTTTACTTTCTTaGGCTTTTCTGGAACCACAC +
Preference number: 5 (lower is better)
Translates to: FACSVRILSPSCIVCFAPDPLLS*AFLEPH
Trigger: GTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGATC...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTGGTTTTGTTTCGGGCTaGACCTCTTTAGGTTCTATG +
Preference number: 5 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLGFVSG*TSLGSM
Trigger: CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACC...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATGGTTTTGTTTCGGGCTaGACCTCTTTAGGTTCTATG +
Preference number: 5 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNGFVSG*TSLGSM
Trigger: CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACC...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACCTGTTAAAGGTTTTCTaGGGTTCTGGTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDLLKVF*GSGGFV
Trigger: AACAAAACCACCAGAACCCAAGAAAACCTTTAACAG...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCGACAGTCGGTCAATTTaGCTGACACTGTTAAAGGTT +
Preference number: 5 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSDSRSI*LTLLKV
Trigger: AACCTTTAACAGTGTCAGCAAAATTGACCGACTGTC...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTTTGGCTTTTCTGGAACCACACTTTTGCCATCCCATGCATAACCTCTCTTAGTGCGGGAAGGCTATTCTaGACAGTCGGTCAATTTTGC +
Preference number: 5 (lower is better)
Translates to: LWLFWNHTFAIPCITSLSAGRLF*TVGQFC
Trigger: GCAAAATTGACCGACTGTCAAGAATAGCCTTCCCGC...ACTAAGAGAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAGAAAAGCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR CAA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTTTTTCTTGTATCTTaGAACCATCTTCCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRLFLVS*NHLPPL
Trigger: AAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAAG...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAATGTGTGGAATGACTaGAACAGAGAGCAACTGATC +
Preference number: 5 (lower is better)
Translates to: FRLLCQNPVSKLHSLLCSNVWND*NREQLI
Trigger: GATCAGTTGCTCTCTGTTCAAGTCATTCCACACATT...GGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACGTTCCTGTGACTGCTTaGTTAAACATGCTTCCTAAT +
Preference number: 5 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDVPVTA*LNMLPN
Trigger: ATTAGGAAGCATGTTTAACAAAGCAGTCACAGGAAC...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637827.1
CDS-3UTR CAA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCAATAATGCTCTTATATaGCTGCGGTTTCACCCTGAA +
Preference number: 5 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCNNALI*LRFHPE
Trigger: TTCAGGGTGAAACCGCAGCAATATAAGAGCATTATT...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636573.1
CDS-3UTR CAA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACATTTCACACCCAAATTaGCTTCCCAATATCCAATCT +
Preference number: 5 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDISHPN*LPNIQS
Trigger: AGATTGGATATTGGGAAGCAAATTTGGGTGTGAAAT...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR CAA 90 bp CGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGAGTGAAGACAGTGGTATaGTCTTTAAGTTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: RLLCQNPVSKLHSLLCSRVKTVV*SLSSSC
Trigger: ACAAGATGAACTTAAAGACAATACCACTGTCTTCAC...TCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTCATATTCTCCTGTACTaGACTGGACAATTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLHILLY*TGQFQS
Trigger: ACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATG...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATGATCCTTTACTTTCTTaGGCTTTTCTGGAACCACAC +
Preference number: 5 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNDPLLS*AFLEPH
Trigger: GTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGATC...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GGCCAAATTAGGGGTGTAGCTGGTTGCTGTTGGAGCGTAAGTGTTGTTTTTCTTGGTTTTGTTTCGGGCTaGACCTCTTTAGGTTCTATG +
Preference number: 5 (lower is better)
Translates to: GQIRGVAGCCWSVSVVFLGFVSG*TSLGSM
Trigger: CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACC...AAGAAAAACAACACTTACGCTCCAACAGCAACCAGCTACACCCCTAATTTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR CAA 90 bp TTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCACTGTTAAAGGTTTTCTaGGGTTCTGGTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: FACSVRILSPSCIVCFAPLLKVF*GSGGFV
Trigger: AACAAAACCACCAGAACCCAAGAAAACCTTTAACAG...TGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTACTGTTAAAGGTTTTCTaGGGTTCTGGTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLLLKVF*GSGGFV
Trigger: AACAAAACCACCAGAACCCAAGAAAACCTTTAACAG...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCTCCCAACTGTCTTATTaGGCAATAATGCTAACAGAT +
Preference number: 5 (lower is better)
Translates to: CSVRILSPSCIVCFAPDCSQLSY*AIMLTD
Trigger: ATCTGTTAGCATTATTGCCAAATAAGACAGTTGGGA...GCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GGCCAAATTAGGGGTGTAGCTGGTTGCTGTTGGAGCGTAAGTGTTGTTTTTCTTAACATTGCTCAAGACTaGGGTTTGGATCCCAACTGT +
Preference number: 5 (lower is better)
Translates to: GQIRGVAGCCWSVSVVFLNIAQD*GLDPNC
Trigger: ACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTT...AAGAAAAACAACACTTACGCTCCAACAGCAACCAGCTACACCCCTAATTTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637044.1
CDS-3UTR CAA 90 bp TGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACTTTTTGAGAAAAACATaGCTCAAGACTTGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: CQNPVSKLHSLLCSRLPDFLRKT*LKTWVW
Trigger: CCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAAAA...GTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCGTGAAGACAGTGGTATaGTCTTTAAGTTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCVKTVV*SLSSSC
Trigger: ACAAGATGAACTTAAAGACAATACCACTGTCTTCAC...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCAGACTGGTGAAGACAGTGGTATaGTCTTTAAGTTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: LLCQNPVSKLHSLLCSRLVKTVV*SLSSSC
Trigger: ACAAGATGAACTTAAAGACAATACCACTGTCTTCAC...CAGTCTGGAGCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAGTGAAGACAGTGGTATaGTCTTTAAGTTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLVKTVV*SLSSSC
Trigger: ACAAGATGAACTTAAAGACAATACCACTGTCTTCAC...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTTGTAGCTGGTTGCTGTaGGAGCGTAAGTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPCSWLL*ERKCCF
Trigger: AAAACAACACTTACGCTCCAACAGCAACCAGCTACA...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GGCCAAATTAGGGGTGTAGCTGGTTGCTGTTGGAGCGTAAGTGTTGTTTTTCTTGACAGTCGGTCAATTTaGCTGACACTGTTAAAGGTT +
Preference number: 5 (lower is better)
Translates to: GQIRGVAGCCWSVSVVFLDSRSI*LTLLKV
Trigger: AACCTTTAACAGTGTCAGCAAAATTGACCGACTGTC...AAGAAAAACAACACTTACGCTCCAACAGCAACCAGCTACACCCCTAATTTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR CAA 90 bp TTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTCTTTTTCTTGTATCTTaGAACCATCTTCCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: LLFRLLCQNPVSKLHSLLLFLVS*NHLPPL
Trigger: AAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAAG...AAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTCCCAACTGTCTTATTaGGCAATAATGCTAACAGAT +
Preference number: 5 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCSQLSY*AIMLTD
Trigger: ATCTGTTAGCATTATTGCCAAATAAGACAGTTGGGA...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTGCTCAAGACTTGGGTTaGGATCCCAACTGTCTTATT +
Preference number: 5 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPAQDLG*DPNCLI
Trigger: AATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGC...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTCTTTCGCTTGCTCTGTCAGAATCCTGTCTCCAAGCTGCATAGTCTGCTTTGCTTGGATAGCAGCTTTTaGAGAAAAACATTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: LFRLLCQNPVSKLHSLLCLDSSF*RKTLLK
Trigger: CTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCAA...GCAAAGCAGACTATGCAGCTTGGAGACAGGATTCTGACAGAGCAAGCGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AAGCTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTATTGGATAGCAGCTTTTaGAGAAAAACATTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: KLHSLLCSRLPDRGLLFLLDSSF*RKTLLK
Trigger: CTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCAA...TAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTGCATAGTCTGCTTTGCTCCAGACTGCCAGACAGGGGTCTCTTGTTCTTAAATTTTGGAGGCAACTGTTaGTCTATGTTATCATGGAGA +
Preference number: 5 (lower is better)
Translates to: LHSLLCSRLPDRGLLFLNFGGNC*SMLSWR
Trigger: TCTCCATGATAACATAGACAAACAGTTGCCTCCAAA...ATTTAAGAACAAGAGACCCCTGTCTGGCAGTCTGGAGCAAAGCAGACTATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS GCA 90 bp TTTCTAGGTTTGAGAATCATATCTCCATTTCCGGAATCATTCCTTTaGCTCGAGCTCCATCATTCTCGGATTAGGAAAATGGGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: FLGLRIISPFPESFL*LELHHSRIRKMGEG
Trigger: TCCCTCTCCCATTTTCCTAATCCGAGAATGATGGAGCTCGAGGCAAAGGAATGATTCCGGAAATGGAGATATGATTCTCAAACCTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000023897.10
ENST00000638112.1
CDS-3UTR CAA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTACTCTGCGTGCTCCTTaGCTGAAGATTTCACACCCA +
Preference number: 5 (lower is better)
Translates to: VENINKFPVQRTEQQNVSTLRAP*LKISHP
Trigger: TGGGTGTGAAATCTTCAGCAAAGGAGCACGCAGAGT...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000638112.1
CDS-3UTR CAA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATTTGGGCATGGTCATGTaGTGGGCCACTGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: YCVENINKFPVQRTEQQNLGMVM*WATDFF
Trigger: AAAGAAGTCAGTGGCCCACAACATGACCATGCCCAA...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTCATATTCTCCTGTACTaGACTGGACAATTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPHILLY*TGQFQS
Trigger: ACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATG...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTGATCCTTTACTTTCTTaGGCTTTTCTGGAACCACAC +
Preference number: 5 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPDPLLS*AFLEPH
Trigger: GTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGATC...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTGCGGGAAGGCTATTCTaGACAGTCGGTCAATTTTGC +
Preference number: 5 (lower is better)
Translates to: VENINKFPVQRTEQQNVSAGRLF*TVGQFC
Trigger: GCAAAATTGACCGACTGTCAAGAATAGCCTTCCCGC...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTTGTTTAGACCGTGACTaGTGGATTCTGAGCACTAAA +
Preference number: 5 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPCLDRD*WILSTK
Trigger: TTTAGTGCTCAGAATCCACAAGTCACGGTCTAAACA...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GGCCAAATTAGGGGTGTAGCTGGTTGCTGTTGGAGCGTAAGTGTTGTTTTTCTTTTTGGTGGGATTTTCTaGATGTTCTTCTTCCAGTCA +
Preference number: 5 (lower is better)
Translates to: GQIRGVAGCCWSVSVVFLFGGIF*MFFFQS
Trigger: TGACTGGAAGAAGAACATCAAGAAAATCCCACCAAA...AAGAAAAACAACACTTACGCTCCAACAGCAACCAGCTACACCCCTAATTTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000636340.1
CDS-3UTR CAA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAGCTGTTACCTCTGAATaGTGCTGGGTTCCTGGACGA +
Preference number: 5 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKAVTSE*CWVPGR
Trigger: TCGTCCAGGAACCCAGCACAATTCAGAGGTAACAGC...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS GCA 90 bp TTTGTCTCTGTCTTTGCTCTTCATCACAGCATCCCAAAGCTTACTTaGATTTTGTCACGCTTGTTCTTCAAACCCCACAAACACAGCTAT +
Preference number: 5 (lower is better)
Translates to: FVSVFALHHSIPKLT*ILSRLFFKPHKHSY
Trigger: ATAGCTGTGTTTGTGGGGTTTGAAGAACAAGCGTGACAAAATGCAAGTAAGCTTTGGGATGCTGTGATGAAGAGCAAAGACAGAGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635916.2
CDS-3UTR CAA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAATCCGGAATCATTCCTTaGCCTCGAGCTCCATCATTC +
Preference number: 5 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKSGIIP*PRAPSF
Trigger: GAATGATGGAGCTCGAGGCAAAGGAATGATTCCGGA...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000023897.10
ENST00000638112.1
CDS-3UTR CAA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTTCCGGAATCATTCCTTaGCCTCGAGCTCCATCATTC +
Preference number: 5 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFSGIIP*PRAPSF
Trigger: GAATGATGGAGCTCGAGGCAAAGGAATGATTCCGGA...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS-3UTR CAA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAGCGGGAAGGCTATTCTaGACAGTCGGTCAATTTTGC +
Preference number: 5 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKAGRLF*TVGQFC
Trigger: GCAAAATTGACCGACTGTCAAGAATAGCCTTCCCGC...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTGCGGGAAGGCTATTCTaGACAGTCGGTCAATTTTGC +
Preference number: 5 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFAGRLF*TVGQFC
Trigger: GCAAAATTGACCGACTGTCAAGAATAGCCTTCCCGC...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATCCTTCTGACATGACTTaGCTCTTTCGCTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: YCVENINKFPVQRTEQQNPSDMT*LFRLLC
Trigger: ACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGG...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTTTGGCTTTTCTGGAACCACACTTTTGCCATCCCATGCATAACCTCTCTTAGTCTTTTTCTTGTATCTTaGAACCATCTTCCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: LWLFWNHTFAIPCITSLSLFLVS*NHLPPL
Trigger: AAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAAG...ACTAAGAGAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAGAAAAGCCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR CAA 90 bp CAACATATTCTCCTGTACTTGACTGGACAATTCCAGAGTCTACTGTTTGTCCAAGCTCAAGACTTGGGTTaGGATCCCAACTGTCTTATT +
Preference number: 5 (lower is better)
Translates to: QHILLYLTGQFQSLLFVQAQDLG*DPNCLI
Trigger: AATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGC...TTGGACAAACAGTAGACTCTGGAATTGTCCAGTCAAGTACAGGAGAATATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637044.1
CDS-3UTR CAA 90 bp AGATCTATTGATGTGGTGTGGGGGCTTTTAGCTGAGGCTCTCTGTTTAAATACGGTGAAGACAGTGGTATaGTCTTTAAGTTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: RSIDVVWGLLAEALCLNTVKTVV*SLSSSC
Trigger: ACAAGATGAACTTAAAGACAATACCACTGTCTTCAC...CGTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCACACCACATCAATAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR CAA 90 bp ATTCTGTCTCCTTCTGACATGACTTTGCTCTTTCGCTTGCTCTGTCAGAATCCTGTGAAGACAGTGGTATaGTCTTTAAGTTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: ILSPSDMTLLFRLLCQNPVKTVV*SLSSSC
Trigger: ACAAGATGAACTTAAAGACAATACCACTGTCTTCAC...AGGATTCTGACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGGAGACAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GTTTGTCCAAGAAGGTCATACTGGTTTAGACGTGATCCATCTTCTGCTACAACCGTGAAGACAGTGGTATaGTCTTTAAGTTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: VCPRRSYWFRRDPSSATTVKTVV*SLSSSC
Trigger: ACAAGATGAACTTAAAGACAATACCACTGTCTTCAC...GGTTGTAGCAGAAGATGGATCACGTCTAAACCAGTATGACCTTCTTGGACAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR CAA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATTGGGCATGGTCATGTaGTGGGCCACTGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRLGMVM*WATDFF
Trigger: AAAGAAGTCAGTGGCCCACAACATGACCATGCCCAA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTTCCAGAGTCTACTGTTaGTCCAAGAAGGTCATACTG +
Preference number: 5 (lower is better)
Translates to: VENINKFPVQRTEQQNVSSRVYC*SKKVIL
Trigger: CAGTATGACCTTCTTGGACAAACAGTAGACTCTGGA...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTGGTTTTGTTTCGGGCTaGACCTCTTTAGGTTCTATG +
Preference number: 5 (lower is better)
Translates to: VENINKFPVQRTEQQNVSGFVSG*TSLGSM
Trigger: CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACC...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAGCGGGAAGGCTATTCTaGACAGTCGGTCAATTTTGC +
Preference number: 5 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRAGRLF*TVGQFC
Trigger: GCAAAATTGACCGACTGTCAAGAATAGCCTTCCCGC...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACACTTTGCTCTTTCGCTaGCTCTGTCAGAATCCTGTC +
Preference number: 5 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNTLLFR*LCQNPV
Trigger: GACAGGATTCTGACAGAGCAAGCGAAAGAGCAAAGT...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAACCTTCTGACATGACTTaGCTCTTTCGCTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKPSDMT*LFRLLC
Trigger: ACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGG...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACCCTTCTGACATGACTTaGCTCTTTCGCTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNPSDMT*LFRLLC
Trigger: ACAGAGCAAGCGAAAGAGCAAAGTCATGTCAGAAGG...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTGCTCAAGACTTGGGTTaGGATCCCAACTGTCTTATT +
Preference number: 5 (lower is better)
Translates to: VENINKFPVQRTEQQNVSAQDLG*DPNCLI
Trigger: AATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGC...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp CTTTGGCTTTTCTGGAACCACACTTTTGCCATCCCATGCATAACCTCTCTTAGTTTTTTGAGAAAAACATaGCTCAAGACTTGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: LWLFWNHTFAIPCITSLSFLRKT*LKTWVW
Trigger: CCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAAAA...ACTAAGAGAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAGAAAAGCCAAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000637044.1
CDS TCA 90 bp CCTAAAGCATATGTCTATTTTGGAAAGAGAAAATGTGCCTGCCCTTaGCTTTGCAGAGAACTAGGGATGGTTCATGTGGCAAACTTAATT +
Preference number: 5 (lower is better)
Translates to: PKAYVYFGKRKCACP*LCRELGMVHVANLI
Trigger: AATTAAGTTTGCCACATGAACCATCCCTAGTTCTCTGCAAAGTCAAGGGCAGGCACATTTTCTCTTTCCAAAATAGACATATGCTTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635916.2
CDS-3UTR CAA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATACTGACTTCTTTCCATaGTGGAAAAATGTGTCCGGA +
Preference number: 5 (lower is better)
Translates to: YCVENINKFPVQRTEQQNTDFFP*WKNVSG
Trigger: TCCGGACACATTTTTCCACAATGGAAAGAAGTCAGT...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCTCCAGAGTCTACTGTTaGTCCAAGAAGGTCATACTG +
Preference number: 5 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCSRVYC*SKKVIL
Trigger: CAGTATGACCTTCTTGGACAAACAGTAGACTCTGGA...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTTCCAGAGTCTACTGTTaGTCCAAGAAGGTCATACTG +
Preference number: 5 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFSRVYC*SKKVIL
Trigger: CAGTATGACCTTCTTGGACAAACAGTAGACTCTGGA...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAATCCAGAGTCTACTGTTaGTCCAAGAAGGTCATACTG +
Preference number: 5 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKSRVYC*SKKVIL
Trigger: CAGTATGACCTTCTTGGACAAACAGTAGACTCTGGA...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCTGTAGCTGGTTGCTGTaGGAGCGTAAGTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCCSWLL*ERKCCF
Trigger: AAAACAACACTTACGCTCCAACAGCAACCAGCTACA...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCGGTTTTGTTTCGGGCTaGACCTCTTTAGGTTCTATG +
Preference number: 5 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCGFVSG*TSLGSM
Trigger: CATAGAACCTAAAGAGGTCAAGCCCGAAACAAAACC...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGACAGTCGGTCAATTTaGCTGACACTGTTAAAGGTT +
Preference number: 5 (lower is better)
Translates to: YCVENINKFPVQRTEQQNDSRSI*LTLLKV
Trigger: AACCTTTAACAGTGTCAGCAAAATTGACCGACTGTC...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTGACAGTCGGTCAATTTaGCTGACACTGTTAAAGGTT +
Preference number: 5 (lower is better)
Translates to: VENINKFPVQRTEQQNVSDSRSI*LTLLKV
Trigger: AACCTTTAACAGTGTCAGCAAAATTGACCGACTGTC...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTTGTTTAGACCGTGACTaGTGGATTCTGAGCACTAAA +
Preference number: 5 (lower is better)
Translates to: VENINKFPVQRTEQQNVSCLDRD*WILSTK
Trigger: TTTAGTGCTCAGAATCCACAAGTCACGGTCTAAACA...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTGCTCAAGACTTGGGTTaGGATCCCAACTGTCTTATT +
Preference number: 5 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFAQDLG*DPNCLI
Trigger: AATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGC...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAACATTGCTCAAGACTaGGGTTTGGATCCCAACTGT +
Preference number: 5 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKNIAQD*GLDPNC
Trigger: ACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTT...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GAACAGGAACTGTCCCCTATAAGAGTGTATCTTTATTTTCAAGGAAGACTTAACAACATTGCTCAAGACTaGGGTTTGGATCCCAACTGT +
Preference number: 5 (lower is better)
Translates to: EQELSPIRVYLYFQGRLNNIAQD*GLDPNC
Trigger: ACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTT...GTTAAGTCTTCCTTGAAAATAAAGATACACTCTTATAGGGGACAGTTCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAATAGAAATGCAGTCATaGCGTAGCAGGAAGCAGACT +
Preference number: 5 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKIEMQS*RSRKQT
Trigger: AGTCTGCTTCCTGCTACGCAATGACTGCATTTCTAT...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAATAGGAAACACACTGTaGAATGCCGGAGTCGTGCTT +
Preference number: 5 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRIGNTL*NAGVVL
Trigger: AAGCACGACTCCGGCATTCAACAGTGTGTTTCCTAT...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637827.1
CDS-3UTR CAA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCGATCCTTTACTTTCTTaGGCTTTTCTGGAACCACAC +
Preference number: 5 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCDPLLS*AFLEPH
Trigger: GTGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGATC...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATCTGTTAAAGGTTTTCTaGGGTTCTGGTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: YCVENINKFPVQRTEQQNLLKVF*GSGGFV
Trigger: AACAAAACCACCAGAACCCAAGAAAACCTTTAACAG...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp ATGTGCTCTACAATGAGCAACTGCACCTTTACGTATGAAAGTTCCATGAATTTTGACAGTCGGTCAATTTaGCTGACACTGTTAAAGGTT +
Preference number: 5 (lower is better)
Translates to: MCSTMSNCTFTYESSMNFDSRSI*LTLLKV
Trigger: AACCTTTAACAGTGTCAGCAAAATTGACCGACTGTC...AAAATTCATGGAACTTTCATACGTAAAGGTGCAGTTGCTCATTGTAGAGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATCTTTTTCTTGTATCTTaGAACCATCTTCCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: YCVENINKFPVQRTEQQNLFLVS*NHLPPL
Trigger: AAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAAG...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAATAGAAATGCAGTCATaGCGTAGCAGGAAGCAGACT +
Preference number: 5 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRIEMQS*RSRKQT
Trigger: AGTCTGCTTCCTGCTACGCAATGACTGCATTTCTAT...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGATTTCACACCCAAATTaGCTTCCCAATATCCAATCT +
Preference number: 5 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWISHPN*LPNIQS
Trigger: AGATTGGATATTGGGAAGCAAATTTGGGTGTGAAAT...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393943.10
ENST00000428797.7
CDS-3UTR CAA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAAGACAGTGGTATaGTCTTTAAGTTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: YCVENINKFPVQRTEQQNVKTVV*SLSSSC
Trigger: ACAAGATGAACTTAAAGACAATACCACTGTCTTCAC...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTGTGAAGACAGTGGTATaGTCTTTAAGTTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: VENINKFPVQRTEQQNVSVKTVV*SLSSSC
Trigger: ACAAGATGAACTTAAAGACAATACCACTGTCTTCAC...ACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGAACTGACTTCTTTCCATaGTGGAAAAATGTGTCCGGA +
Preference number: 5 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRTDFFP*WKNVSG
Trigger: TCCGGACACATTTTTCCACAATGGAAAGAAGTCAGT...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATCTATTACTGACTTCTTTCCATaGTGGAAAAATGTGTCCGGA +
Preference number: 5 (lower is better)
Translates to: NKFPVQRTEQQNVSKRSITDFFP*WKNVSG
Trigger: TCCGGACACATTTTTCCACAATGGAAAGAAGTCAGT...AATAGATCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636340.1
ENST00000637044.1
CDS-3UTR CAA 90 bp AGGTTTTATTGCCACTTCACTGCACTAAAGTGCAATAAACATTCAGTGTCATCTCTGTTAAAGGTTTTCTaGGGTTCTGGTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: RFYCHFTALKCNKHSVSSLLKVF*GSGGFV
Trigger: AACAAAACCACCAGAACCCAAGAAAACCTTTAACAG...AGATGACACTGAATGTTTATTGCACTTTAGTGCAGTGAAGTGGCAATAAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAACTGTTAAAGGTTTTCTaGGGTTCTGGTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKLLKVF*GSGGFV
Trigger: AACAAAACCACCAGAACCCAAGAAAACCTTTAACAG...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAACTTTTTCTTGTATCTTaGAACCATCTTCCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKLFLVS*NHLPPL
Trigger: AAGAGGGGGAAGATGGTTCAAAGATACAAGAAAAAG...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATGTTTAGACCGTGACTaGTGGATTCTGAGCACTAAA +
Preference number: 5 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRCLDRD*WILSTK
Trigger: TTTAGTGCTCAGAATCCACAAGTCACGGTCTAAACA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGTCCCAACTGTCTTATTaGGCAATAATGCTAACAGAT +
Preference number: 5 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWSQLSY*AIMLTD
Trigger: ATCTGTTAGCATTATTGCCAAATAAGACAGTTGGGA...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TTTGAGAAAAACATTGCTCAAGACTTGGGTTTGGATCCCAACTGTCTTATTTGGTTGGATAGCAGCTTTTaGAGAAAAACATTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: FEKNIAQDLGLDPNCLIWLDSSF*RKTLLK
Trigger: CTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCAA...CCAAATAAGACAGTTGGGATCCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp TACTGCGTTGAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATTTGGATAGCAGCTTTTaGAGAAAAACATTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: YCVENINKFPVQRTEQQNLDSSF*RKTLLK
Trigger: CTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCAA...ATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTCAACGCAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GCAGGTTCTAAATGTATTTCCATAGCATTTAACAACATTCCAACAGCTAAGTGCGTGAAGACAGTGGTATaGTCTTTAAGTTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: AGSKCISIAFNNIPTAKCVKTVV*SLSSSC
Trigger: ACAAGATGAACTTAAAGACAATACCACTGTCTTCAC...GCACTTAGCTGTTGGAATGTTGTTAAATGCTATGGAAATACATTTAGAACCTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGACTGTTAAAGGTTTTCTaGGGTTCTGGTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRLLKVF*GSGGFV
Trigger: AACAAAACCACCAGAACCCAAGAAAACCTTTAACAG...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000635880.1
ENST00000636340.1
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS-3UTR CAA 90 bp GAGAACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAATTTTTGAGAAAAACATaGCTCAAGACTTGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: ENINKFPVQRTEQQNVSKFLRKT*LKTWVW
Trigger: CCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAAAA...TTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATCCCAACTGTCTTATTaGGCAATAATGCTAACAGAT +
Preference number: 5 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRSQLSY*AIMLTD
Trigger: ATCTGTTAGCATTATTGCCAAATAAGACAGTTGGGA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATTTTTGAGAAAAACATaGCTCAAGACTTGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRFLRKT*LKTWVW
Trigger: CCAAACCCAAGTCTTGAGCAATGTTTTTCTCAAAAA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS-3UTR CAA 90 bp AACATAAATAAATTCCCAGTGCAGAGGACTGAACAACAGAATGTGAGTAAAAGATTGGATAGCAGCTTTTaGAGAAAAACATTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: NINKFPVQRTEQQNVSKRLDSSF*RKTLLK
Trigger: CTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCCAA...TCTTTTACTCACATTCTGTTGTTCAGTCCTCTGCACTGGGAATTTATTTATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000637044.1
ENST00000638159.1
CDS GCA 72 bp GAGAGAATCGTGGAGAGACTGGAGCCAGCGCGAGTCTaGGAGTCCGAGTCCGGGCGCGCCAGAGCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: ERIVERLEPARV*ESESGRARAEG
Trigger: CCCCTCTGCTCTGGCGCGCCCGGACTCGGACTCGCAGACTCGCGCTGGCTCCAGTCTCTCCACGATTCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000635096.1
ENST00000635916.2
ENST00000637044.1
ENST00000638112.1
CDS CCA 72 bp CGGGGAAAAGTCTGGGAGAGAGAATCGTGGAGAGACTaGAGCCAGCGCGAGTCTGCGAGTCCGAGTCCGGGC +
Preference number: 6 (lower is better)
Translates to: RGKVWERESWRD*SQRESASPSPG
Trigger: GCCCGGACTCGGACTCGCAGACTCGCGCTGGCTCCAGTCTCTCCACGATTCTCTCTCCCAGACTTTTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000635096.1
ENST00000635916.2
ENST00000637044.1
ENST00000638112.1
CDS CAA 90 bp CTGGAGCAGCTGCTGTGGGATCAGGCTCCTGTCCTGCTCGCTCCCTaGCTCGCTCGCTCGCTCTCCTTCTTCTCTCTCTCTCTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: LEQLLWDQAPVLLAP*LARSLSFFSLSLSP
Trigger: GGGAGAGAGAGAGAGAGAGAAGAAGGAGAGCGAGCGAGCGAGCAAGGGAGCGAGCAGGACAGGAGCCTGATCCCACAGCAGCTGCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS GCA 72 bp AGACCTGGACTTTTCCTCATCGCGGGCTGGAGCAGCTaGTGTGGGATCAGGCTCCTGTCCTGCTCGCTCCCT +
Preference number: 6 (lower is better)
Translates to: RPGLFLIAGWSS*CGIRLLSCSLP
Trigger: AGGGAGCGAGCAGGACAGGAGCCTGATCCCACAGCAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS GCA 72 bp TGCTGTGGGATCAGGCTCCTGTCCTGCTCGCTCCCTTaGTCGCTCGCTCGCTCTCCTTCTTCTCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: CCGIRLLSCSLP*SLARSPSSLSL
Trigger: GAGAGAGAGAGAAGAAGGAGAGCGAGCGAGCGAGCAAGGGAGCGAGCAGGACAGGAGCCTGATCCCACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS GCA 72 bp CAGTCAGACAGACCTGGACTTTTCCTCATCGCGGGCTaGTGTGGGATCAGGCTCCTGTCCTGCTCGCTCCCT +
Preference number: 6 (lower is better)
Translates to: QSDRPGLFLIAG*CGIRLLSCSLP
Trigger: AGGGAGCGAGCAGGACAGGAGCCTGATCCCACAGCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519621.2
CDS CAA 72 bp CTGCTGTGGGATCAGGCTCCTGTCCTGCTCGCTCCCTaGCTCGCTCGCTCGCTCTCCTTCTTCTCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: LLWDQAPVLLAP*LARSLSFFSLS
Trigger: AGAGAGAGAGAAGAAGGAGAGCGAGCGAGCGAGCAAGGGAGCGAGCAGGACAGGAGCCTGATCCCACAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS CCA 72 bp AAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCCTGCG +
Preference number: 6 (lower is better)
Translates to: KEDPGPKTVRQT*TFPHRGLEQPA
Trigger: CGCAGGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636573.1
CDS CCA 72 bp AAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: KEDPGPKTVRQT*TFPHRGLEQLL
Trigger: CAGCAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437025.6
CDS CCA 72 bp AAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCATCCC +
Preference number: 6 (lower is better)
Translates to: KEDPGPKTVRQT*TFPHRGLEQHP
Trigger: GGGATGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521339.5
CDS CCA 72 bp AAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCTAAGG +
Preference number: 6 (lower is better)
Translates to: KEDPGPKTVRQT*TFPHRGLEQLR
Trigger: CCTTAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000635096.1
ENST00000635916.2
ENST00000636340.1
ENST00000637044.1
ENST00000638112.1
CDS CCA 72 bp AAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGCTGTGGGATCAG +
Preference number: 6 (lower is better)
Translates to: KEDPGPKTVRQT*TFPHRGLLWDQ
Trigger: CTGATCCCACAGCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519621.2
CDS CCA 72 bp AAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCTCACT +
Preference number: 6 (lower is better)
Translates to: KEDPGPKTVRQT*TFPHRGLEQLT
Trigger: AGTGAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522651.6
CDS CCA 72 bp AAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGTGGGAT +
Preference number: 6 (lower is better)
Translates to: KEDPGPKTVRQT*TFPHRGLEQWD
Trigger: ATCCCACTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635880.1
CDS CCA 72 bp AAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCTTGAT +
Preference number: 6 (lower is better)
Translates to: KEDPGPKTVRQT*TFPHRGLEQLD
Trigger: ATCAAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637827.1
CDS CCA 72 bp AAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: KEDPGPKTVRQT*TFPHRGLEQLK
Trigger: TTTCAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634335.1
CDS CCA 72 bp AAGGAGGATCCAGGCCCAAAGACAGTCAGACAGACCTaGACTTTTCCTCATCGCGGGCTGGAGCAGCTCATT +
Preference number: 6 (lower is better)
Translates to: KEDPGPKTVRQT*TFPHRGLEQLI
Trigger: AATGAGCTGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGACTGTCTTTGGGCCTGGATCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS CCA 72 bp CGGGCTGGAGCAGCTCACTGGGATATGACACCTCATTaGAAGCAATGGAAACCTGGACCATCCATTCTCCAC +
Preference number: 6 (lower is better)
Translates to: RAGAAHWDMTPH*KQWKPGPSILH
Trigger: GTGGAGAATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGGTGTCATATCCCAGTGAGCTGCTCCAGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522651.6
CDS CCA 72 bp CATCGCGGGCTGGAGCAGTGGGATATGACACCTCATTaGAAGCAATGGAAACCTGGACCATCCATTCTCCAC +
Preference number: 6 (lower is better)
Translates to: HRGLEQWDMTPH*KQWKPGPSILH
Trigger: GTGGAGAATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGGTGTCATATCCCACTGCTCCAGCCCGCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635880.1
CDS CCA 72 bp TCCTCATCGCGGGCTGGAGCAGCTCATTGGAAGCAATaGAAACCTGGACCATCCATTCTCCACTTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: SSSRAGAAHWKQ*KPGPSILHFPF
Trigger: GAAGGGAAAGTGGAGAATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGCTGCTCCAGCCCGCGATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS CAA 72 bp GCGGGCTGGAGCAGCTCACTGGGATATGACACCTCATaGGAAGCAATGGAAACCTGGACCATCCATTCTCCA +
Preference number: 6 (lower is better)
Translates to: AGWSSSLGYDTS*EAMETWTIHSP
Trigger: TGGAGAATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGGTGTCATATCCCAGTGAGCTGCTCCAGCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522651.6
CDS GCA 72 bp GTAATGACGGCTGTCCATAGCTTCTTCCAGTCAGTGTaGTCAGAAGGAGGATCCAGGCCCAAAGACAGTCAG +
Preference number: 6 (lower is better)
Translates to: VMTAVHSFFQSV*SEGGSRPKDSQ
Trigger: CTGACTGTCTTTGGGCCTGGATCCTCCTTCTGAGCACACTGACTGGAAGAAGCTATGGACAGCCGTCATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000437025.6
ENST00000519621.2
ENST00000521339.5
ENST00000522651.6
ENST00000634335.1
ENST00000635096.1
ENST00000635880.1
ENST00000635916.2
ENST00000636573.1
ENST00000637044.1
ENST00000637827.1
ENST00000638112.1
ENST00000638159.1
CDS CCA 72 bp TCGCTCTGCCTCTCACTCACTTGGTCTGAGCCATCATaGACTCTGCGTGCTCCTTTGCTGAAGATTTCACAC +
Preference number: 6 (lower is better)
Translates to: SLCLSLTWSEPS*TLRAPLLKISH
Trigger: GTGTGAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGATGGCTCAGACCAAGTGAGTGAGAGGCAGAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000635096.1
ENST00000635916.2
ENST00000638112.1
CDS CAA 72 bp TCATCGCGGGCTGGAGCAGTGGGATATGACACCTCATaGGAAGCAATGGAAACCTGGACCATCCATTCTCCA +
Preference number: 6 (lower is better)
Translates to: SSRAGAVGYDTS*EAMETWTIHSP
Trigger: TGGAGAATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGGTGTCATATCCCACTGCTCCAGCCCGCGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635880.1
CDS CAA 90 bp TCATGGACTCTGCGTGCTCCTTTGCTGAAGATTTCACACCCAAATTaGCTTCCCAATATCCAATCTGCAGACGTGTGGGGAGAGCACTCG +
Preference number: 6 (lower is better)
Translates to: SWTLRAPLLKISHPN*LPNIQSADVWGEHS
Trigger: CGAGTGCTCTCCCCACACGTCTGCAGATTGGATATTGGGAAGCAAATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635096.1
CDS TCA 72 bp TTAAACCACTGCCTGCATATGAATGAACGCAAGCTCTaGAACTGGGAGATGCAGGGTTACACGTGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: LNHCLHMNERKL*NWEMQGYTCGE
Trigger: CTCCCCACACGTGTAACCCTGCATCTCCCAGTTTCAGAGCTTGCGTTCATTCATATGCAGGCAGTGGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428797.7
ENST00000635916.2
CDS CCA 72 bp GCAGCTCACTGGGATATGACACCTCATTGGAAGCAATaGAAACCTGGACCATCCATTCTCCACTTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: AAHWDMTPHWKQ*KPGPSILHFPF
Trigger: GAAGGGAAAGTGGAGAATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGGTGTCATATCCCAGTGAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522651.6
CDS CCA 72 bp CTGGAGCAGTGGGATATGACACCTCATTGGAAGCAATaGAAACCTGGACCATCCATTCTCCACTTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: LEQWDMTPHWKQ*KPGPSILHFPF
Trigger: GAAGGGAAAGTGGAGAATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGGTGTCATATCCCACTGCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635880.1
CDS CAA 72 bp CTGCGTGCTCCTTTGCTGAAGATTTCACACCCAAATTaGCTTCCCAATATCCAATCTGCAGACGTGTGGGGA +
Preference number: 6 (lower is better)
Translates to: LRAPLLKISHPN*LPNIQSADVWG
Trigger: TCCCCACACGTCTGCAGATTGGATATTGGGAAGCAAATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635096.1
CDS CAA 90 bp TCATGGACTCTGCGTGCTCCTTTGCTGAAGATTTCACACCCAAATTaGCTTCCCAATATCCAATCTGCAGCTCTGAATTGTGCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: SWTLRAPLLKISHPN*LPNIQSAALNCAGF
Trigger: GAACCCAGCACAATTCAGAGCTGCAGATTGGATATTGGGAAGCAAATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000023897.10
CDS CAA 90 bp CTCTCACTCACTTGGTCTGAGCCATCATGGACTCTGCGTGCTCCTTaGCTGAAGATTTCACACCCAAATTTGCTTCCCAATATCCAATCT +
Preference number: 6 (lower is better)
Translates to: LSLTWSEPSWTLRAP*LKISHPNLLPNIQS
Trigger: AGATTGGATATTGGGAAGCAAATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGATGGCTCAGACCAAGTGAGTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000635096.1
ENST00000635916.2
ENST00000638112.1
CDS GCA 72 bp CGCGGGCTGGAGCAGCCTGCGGAATACATTCAAATATaGCTAAGAAAGAGGAGAAGAAAAGAAGAAAGACAG +
Preference number: 6 (lower is better)
Translates to: RGLEQPAEYIQI*LRKRRRKEERQ
Trigger: CTGTCTTTCTTCTTTTCTTCTCCTCTTTCTTAGGCATATTTGAATGTATTCCGCAGGCTGCTCCAGCCCGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636573.1
CDS CAA 72 bp ACTTGGTCTGAGCCATCATGGACTCTGCGTGCTCCTTaGCTGAAGATTTCACACCCAAATTTGCTTCCCAAT +
Preference number: 6 (lower is better)
Translates to: TWSEPSWTLRAP*LKISHPNLLPN
Trigger: ATTGGGAAGCAAATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGATGGCTCAGACCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000023897.10
ENST00000393943.10
ENST00000428797.7
ENST00000635096.1
ENST00000635916.2
ENST00000638112.1
CDS CAA 72 bp GAGCAGCATCCCATGCCATCCATATCAAAGACTAAGTaGAGTTTTCGTGTTCAGAATGGGAGAGACCCCTAC +
Preference number: 6 (lower is better)
Translates to: EQHPMPSISKTK*SFRVQNGRDPY
Trigger: GTAGGGGTCTCTCCCATTCTGAACACGAAAACTCAACTTAGTCTTTGATATGGATGGCATGGGATGCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521339.5
CDS CAA 72 bp AGTCAGGAAATGACCTCACTGGGATATGACACCTCATaGGAAGCAATGGAAACCTGGACCATCCATTCTCCA +
Preference number: 6 (lower is better)
Translates to: SQEMTSLGYDTS*EAMETWTIHSP
Trigger: TGGAGAATGGATGGTCCAGGTTTCCATTGCTTCCAATGAGGTGTCATATCCCAGTGAGGTCATTTCCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634335.1
CDS CAA 72 bp CTGCGTGCTCCTTTGCTGAAGATTTCACACCCAAATTaGCTTCCCAATATCCAATCTGCAGCTTTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: LRAPLLKISHPN*LPNIQSAALEA
Trigger: TGCCTCCAAAGCTGCAGATTGGATATTGGGAAGCAAATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS CAA 90 bp TCTGTCTTTGCTCTTCATCACAGCATCCCAAAGCTTACTTGCATTTaGTCACGCTTGTTCTTCAAACCCCACAAACACAGCTATCCTCCC +
Preference number: 6 (lower is better)
Translates to: SVFALHHSIPKLTCI*SRLFFKPHKHSYPP
Trigger: GGGAGGATAGCTGTGTTTGTGGGGTTTGAAGAACAAGCGTGACAAAATGCAAGTAAGCTTTGGGATGCTGTGATGAAGAGCAAAGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635916.2
CDS CAA 90 bp AGTGTCCTTATTCTCCATCCCATGCCATCCATATCAAAGACTAAGTaGAGTTTTCGTGTTCAGAATGGGAGAGACCCCTACACAAGAGGG +
Preference number: 6 (lower is better)
Translates to: SVLILHPMPSISKTK*SFRVQNGRDPYTRG
Trigger: CCCTCTTGTGTAGGGGTCTCTCCCATTCTGAACACGAAAACTCAACTTAGTCTTTGATATGGATGGCATGGGATGGAGAATAAGGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS CAA 90 bp TCATGGACTCTGCGTGCTCCTTTGCTGAAGATTTCACACCCAAATTaGCTTCCCAATATCCAATCTGCAGCTTTGGAGGCAACTGTTTGT +
Preference number: 6 (lower is better)
Translates to: SWTLRAPLLKISHPN*LPNIQSAALEATVC
Trigger: ACAAACAGTTGCCTCCAAAGCTGCAGATTGGATATTGGGAAGCAAATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS TCA 72 bp AGCAGCATCCCATGCCATCCATATCAAAGACTAAGTTaGGTTTTCGTGTTCAGAATGGGAGAGACCCCTACA +
Preference number: 6 (lower is better)
Translates to: SSIPCHPYQRLS*VFVFRMGETPT
Trigger: TGTAGGGGTCTCTCCCATTCTGAACACGAAAACTCAACTTAGTCTTTGATATGGATGGCATGGGATGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521339.5
CDS CAA 72 bp TCCCAATATCCAATCTGCAGCTTTGGAGGCAACTGTTaGTCTATGTTATCATGGAGAAAACGCAGGCGCTGT +
Preference number: 6 (lower is better)
Translates to: SQYPICSFGGNC*SMLSWRKRRRC
Trigger: ACAGCGCCTGCGTTTTCTCCATGATAACATAGACAAACAGTTGCCTCCAAAGCTGCAGATTGGATATTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638112.1
CDS TCA 72 bp AATGCTTTGAAGTCAGGAAATGACCTCACTGGGATATaGCACCTCATTGGAAGCAATGGAAACCTGGACCAT +
Preference number: 6 (lower is better)
Translates to: NALKSGNDLTGI*HLIGSNGNLDH
Trigger: ATGGTCCAGGTTTCCATTGCTTCCAATGAGGTGTCATATCCCAGTGAGGTCATTTCCTGACTTCAAAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634335.1
CDS TCA 72 bp TTCTCCATCCCATGCCATCCATATCAAAGACTAAGTTaGGTTTTCGTGTTCAGAATGGGAGAGACCCCTACA +
Preference number: 6 (lower is better)
Translates to: FSIPCHPYQRLS*VFVFRMGETPT
Trigger: TGTAGGGGTCTCTCCCATTCTGAACACGAAAACTCAACTTAGTCTTTGATATGGATGGCATGGGATGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS CAA 72 bp CTGCGTGCTCCTTTGCTGAAGATTTCACACCCAAATTaGCTTCCCAATATCCAATCTGCAGCTCTGAATTGT +
Preference number: 6 (lower is better)
Translates to: LRAPLLKISHPN*LPNIQSAALNC
Trigger: ACAATTCAGAGCTGCAGATTGGATATTGGGAAGCAAATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000023897.10
CDS CAA 72 bp ATTCTCCATCCCATGCCATCCATATCAAAGACTAAGTaGAGTTTTCGTGTTCAGAATGGGAGAGACCCCTAC +
Preference number: 6 (lower is better)
Translates to: ILHPMPSISKTK*SFRVQNGRDPY
Trigger: GTAGGGGTCTCTCCCATTCTGAACACGAAAACTCAACTTAGTCTTTGATATGGATGGCATGGGATGGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638159.1
CDS CAA 90 bp CTTTGTCTCTGTCTTTGCTCTTCATCACAGCATCCCAAAGCTTACTaGCATTTTGTCACGCTTGTTCTTCAAACCCCACAAACACAGCTA +
Preference number: 6 (lower is better)
Translates to: LCLCLCSSSQHPKAY*HFVTLVLQTPQTQL
Trigger: TAGCTGTGTTTGTGGGGTTTGAAGAACAAGCGTGACAAAATGCAAGTAAGCTTTGGGATGCTGTGATGAAGAGCAAAGACAGAGACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635916.2
CDS TCA 72 bp AGCAAGAAACATCAGGTTATAACCACCAGGGCTGACTaGGGCAGTTTAGATGAATGCTTTGAAGTCAGGAAA +
Preference number: 6 (lower is better)
Translates to: SKKHQVITTRAD*GSLDECFEVRK
Trigger: TTTCCTGACTTCAAAGCATTCATCTAAACTGCCTCAGTCAGCCCTGGTGGTTATAACCTGATGTTTCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634335.1
CDS CAA 72 bp CTGCGTGCTCCTTTGCTGAAGATTTCACACCCAAATTaGCTTCCCAATATCCAATCTGCAGCTATACAACAA +
Preference number: 6 (lower is better)
Translates to: LRAPLLKISHPN*LPNIQSAAIQQ
Trigger: TTGTTGTATAGCTGCAGATTGGATATTGGGAAGCAAATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393943.10
ENST00000635916.2
CDS CAA 72 bp CTGCGTGCTCCTTTGCTGAAGATTTCACACCCAAATTaGCTTCCCAATATCCAATCTGCAGCTTTGATCAAA +
Preference number: 6 (lower is better)
Translates to: LRAPLLKISHPN*LPNIQSAALIK
Trigger: TTTGATCAAAGCTGCAGATTGGATATTGGGAAGCAAATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428797.7
CDS CAA 72 bp TGTCTTTGCTCTTCATCACAGCATCCCAAAGCTTACTaGCATTTTGTCACGCTTGTTCTTCAAACCCCACAA +
Preference number: 6 (lower is better)
Translates to: CLCSSSQHPKAY*HFVTLVLQTPQ
Trigger: TTGTGGGGTTTGAAGAACAAGCGTGACAAAATGCAAGTAAGCTTTGGGATGCTGTGATGAAGAGCAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635916.2
CDS CAA 72 bp CCGGAGTCGTGCTTTTATTCTGTTCCTGTGACTGCTTaGTTAAACATGCTTCCTAATGTTTCTGTGAAGCTA +
Preference number: 6 (lower is better)
Translates to: PESCFYSVPVTA*LNMLPNVSVKL
Trigger: TAGCTTCACAGAAACATTAGGAAGCATGTTTAACAAAGCAGTCACAGGAACAGAATAAAAGCACGACTCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637827.1
CDS CAA 90 bp TCATGGACTCTGCGTGCTCCTTTGCTGAAGATTTCACACCCAAATTaGCTTCCCAATATCCAATCTGCAGCTATACAACAAAAGATTTCT +
Preference number: 6 (lower is better)
Translates to: SWTLRAPLLKISHPN*LPNIQSAAIQQKIS
Trigger: AGAAATCTTTTGTTGTATAGCTGCAGATTGGATATTGGGAAGCAAATTTGGGTGTGAAATCTTCAGCAAAGGAGCACGCAGAGTCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393943.10
ENST00000635916.2
CDS GCA 72 bp ATTTACCTTTTCTGGAACCACACTTTTGCCATCCCATaGATAACCTCTCTTAGTGAAATAGTTTACTGTGGC +
Preference number: 6 (lower is better)
Translates to: IYLFWNHTFAIP*ITSLSEIVYCG
Trigger: GCCACAGTAAACTATTTCACTAAGAGAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAGAAAAGGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635916.2
CDS CAA 72 bp ACATGGCAGATGCATGTGAAAATCTTGGGGAAGAGTTaGTCCAATAGACAAACTAACAAGTGTCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: TWQMHVKILGKS*SNRQTNKCLLL
Trigger: AAGAAGAAGACACTTGTTAGTTTGTCTATTGGACAAACTCTTCCCCAAGATTTTCACATGCATCTGCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635916.2
CDS CAA 90 bp GACGAAGAATATTTAACTAATAAATCACTCCGATCATTTCTAGGTTaGAGAATCATATCTCCATTTCCGGAATCATTCCTTTGCCTCGAG +
Preference number: 6 (lower is better)
Translates to: DEEYLTNKSLRSFLG*RIISPFPESFLCLE
Trigger: CTCGAGGCAAAGGAATGATTCCGGAAATGGAGATATGATTCTCAAACCTAGAAATGATCGGAGTGATTTATTAGTTAAATATTCTTCGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000023897.10
ENST00000638112.1
CDS CAA 90 bp GGAGGTAACATTTATACAAATACATGGCAGATGCATGTGAAAATCTaGGGGAAGAGTTTGTCCAATAGACAAACTAACAAGTGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: GGNIYTNTWQMHVKI*GKSLSNRQTNKCLL
Trigger: AAGAAGACACTTGTTAGTTTGTCTATTGGACAAACTCTTCCCCAAGATTTTCACATGCATCTGCCATGTATTTGTATAAATGTTACCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635916.2
CDS TCA 72 bp GAGGTAACATTTATACAAATACATGGCAGATGCATGTaGAAATCTTGGGGAAGAGTTTGTCCAATAGACAAA +
Preference number: 6 (lower is better)
Translates to: EVTFIQIHGRCM*KSWGRVCPIDK
Trigger: TTTGTCTATTGGACAAACTCTTCCCCAAGATTTTCACATGCATCTGCCATGTATTTGTATAAATGTTACCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635916.2
CDS GCA 72 bp GATTTCACACCCAAATTTGCTTCCCAATATCCAATCTaGAGCTATACAACAAAAGATTTCTCTTTACCAAGA +
Preference number: 6 (lower is better)
Translates to: DFTPKFASQYPI*SYTTKDFSLPR
Trigger: TCTTGGTAAAGAGAAATCTTTTGTTGTATAGCTGCAGATTGGATATTGGGAAGCAAATTTGGGTGTGAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393943.10
ENST00000635916.2