RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FUT11 (Homo sapiens)

Ensembl gene IDs: ENSG00000196968

Ensembl transcript IDs: ENST00000372841.8, ENST00000394790.2, ENST00000465695.1, ENST00000489264.2

Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGTTAAAGGCTCTTGCAAGGGCACTTAGAGATGTTGCCTCTTCATaGAGATTTCATGTAGGTAATCCCAAAATTTCGTCTGCTCTGTTT +
Preference number: 1 (lower is better)
Translates to: KLKALARALRDVASS*RFHVGNPKISSALF
Trigger: AAACAGAGCAGACGAAATTTTGGGATTACCTACATGAAATCTTCATGAAGAGGCAACATCTCTAAGTGCCCTTGCAAGAGCCTTTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394790.2
3UTR CAA 90 bp ATTGTTGTGGATCATGGCAGTGAGAGCTTCCCCCTGGTCCAGACCTaGCCAATAATCTTGCAGCCACATCTCTTTCCAACTGAAATATCA +
Preference number: 2 (lower is better)
Translates to: IVVDHGSESFPLVQT*PIILQPHLFPTEIS
Trigger: TGATATTTCAGTTGGAAAGAGATGTGGCTGCAAGATTATTGGCAAGGTCTGGACCAGGGGGAAGCTCTCACTGCCATGATCCACAACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394790.2
3UTR-3UTR GCA 90 bp CCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTTCATTAAGGGTTTGTaGAGTGGATGCTCCTTATGT +
Preference number: 2 (lower is better)
Translates to: PTEPRIVSLHLSLRRGPMFIKGL*SGCSLC
Trigger: ACATAAGGAGCATCCACTGCACAAACCCTTAATGAA...CATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
3UTR-3UTR TCA 90 bp TGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTTAGACCTTGGCTACTCAAAACTGGAATTCCTTaGATCCATGAAAAGACAGTG +
Preference number: 2 (lower is better)
Translates to: CIPPSLLEERPYVRPWLLKTGIP*IHEKTV
Trigger: CACTGTCTTTTCATGGATTCAAGGAATTCCAGTTTT...GAGTAGCCAAGGTCTAACATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
3UTR-3UTR TCA 90 bp ATGAGGAGTCTGGGGAATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTGGTTCTGTTTCCCACTaGACCAAGAATTGTATCCCT +
Preference number: 2 (lower is better)
Translates to: MRSLGNRTKVVSRNLTHLGSVSH*TKNCIP
Trigger: AGGGATACAATTCTTGGTTCAGTGGGAAACAGAACC...AAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATTCCCCAGACTCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
3UTR-3UTR GCA 90 bp ATAATGAGGAGTCTGGGGAATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATGGTTTGTGCAGTGGATaGTCCTTATGTCCCATGGTA +
Preference number: 2 (lower is better)
Translates to: IMRSLGNRTKVVSRNLTHGLCSG*SLCPMV
Trigger: TACCATGGGACATAAGGAGCATCCACTGCACAAACC...ATGGGTCAGGTTACGACTTACAACTTTTGTTCTATTCCCCAGACTCCTCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
3UTR-3UTR TCA 90 bp AATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCGGTTCTGTTTCCCACTaGACCAAGAATTGTATCCCT +
Preference number: 2 (lower is better)
Translates to: NQMDVLGFCFPLNQELYPGSVSH*TKNCIP
Trigger: AGGGATACAATTCTTGGTTCAGTGGGAAACAGAACC...GGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
3UTR-3UTR CCA 90 bp CTTGAGGAGAGGCCCTATGTTAGACCTTGGCTACTCATCATTAAGATAAAATCTTCTGTTTCATTGTTGTaGATCATGGCAGTGAGAGCT +
Preference number: 2 (lower is better)
Translates to: LEERPYVRPWLLIIKIKSSVSLL*IMAVRA
Trigger: AGCTCTCACTGCCATGATCCACAACAATGAAACAGA...AGATTTTATCTTAATGATGAGTAGCCAAGGTCTAACATAGGGCCTCTCCTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394790.2
3UTR-3UTR CCA 90 bp TCCGGAAAACCAGAATACAACTCACCAAATGTTTTGCTTCTCCACCAACGTAACCCCTATGTTAGACCTTaGCTACTCATCATTAAGATA +
Preference number: 2 (lower is better)
Translates to: SGKPEYNSPNVLLLHQRNPYVRP*LLIIKI
Trigger: TATCTTAATGATGAGTAGCCAAGGTCTAACATAGGG...GTTACGTTGGTGGAGAAGCAAAACATTTGGTGAGTTGTATTCTGGTTTTCCGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
3UTR-3UTR TCA 90 bp ATAATGAGGAGTCTGGGGAATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATACATCTCTTTCCAACTaGAATATCAAAATGGGGGTT +
Preference number: 2 (lower is better)
Translates to: IMRSLGNRTKVVSRNLTHTSLSN*NIKMGV
Trigger: AACCCCCATTTTGATATTTCAGTTGGAAAGAGATGT...ATGGGTCAGGTTACGACTTACAACTTTTGTTCTATTCCCCAGACTCCTCATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394790.2
3UTR-3UTR GCA 90 bp AATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCCAAAATTTCGTCTaGTCTGTTTCATTGTTGTGG +
Preference number: 2 (lower is better)
Translates to: NQMDVLGFCFPLNQELYPSQNFV*SVSLLW
Trigger: CCACAACAATGAAACAGAGCAGACGAAATTTTGGGA...GGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394790.2
3UTR-3UTR TCA 90 bp TTGAATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATAAAACTGGAATTCCTTaGATCCATGAAAAGACAGTG +
Preference number: 2 (lower is better)
Translates to: LNQMDVLGFCFPLNQELYKTGIP*IHEKTV
Trigger: CACTGTCTTTTCATGGATTCAAGGAATTCCAGTTTT...ATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
3UTR-3UTR CAA 90 bp TGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCGTGTTCATTAAGGGTTaGTGCAGTGGATGCTCCTTA +
Preference number: 3 (lower is better)
Translates to: CFRVLFPTEPRIVSLHLSVFIKG*CSGCSL
Trigger: TAAGGAGCATCCACTGCACAAACCCTTAATGAACAC...GGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
3UTR-3UTR CAA 90 bp TCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCGGGCACTTAGAGATGTaGCCTCTTCATGAAGATTTC +
Preference number: 3 (lower is better)
Translates to: SNGCFRVLFPTEPRIVSLGHLEM*PLHEDF
Trigger: GAAATCTTCATGAAGAGGCAACATCTCTAAGTGCCC...GAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394790.2
3UTR TCA 72 bp GCTCTTGCAAGGGCACTTAGAGATGTTGCCTCTTCATaGAGATTTCATGTAGGTAATCCCAAAATTTCGTCT +
Preference number: 3 (lower is better)
Translates to: ALARALRDVASS*RFHVGNPKISS
Trigger: AGACGAAATTTTGGGATTACCTACATGAAATCTTCATGAAGAGGCAACATCTCTAAGTGCCCTTGCAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394790.2
3UTR-3UTR CAA 90 bp AAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTTGCTCTGTTTCATTGTaGTGGATCATGGCAGTGAGA +
Preference number: 3 (lower is better)
Translates to: KVVSRNLTHLTSLVIKYSCSVSL*WIMAVR
Trigger: TCTCACTGCCATGATCCACAACAATGAAACAGAGCA...ACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CCA 90 bp TCATTGTTGTGGATCATGGCAGTGAGAGCTTCCCCCTGGTCCAGACCTTGCCAAACTCCGCGCGTTCCATaGGCGGAGGCACCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLLWIMAVRASPWSRPCQTPRVP*AEAPGG
Trigger: GCCGCCCGGTGCCTCCGCCCATGGAACGCGCGGAGT...TTGGCAAGGTCTGGACCAGGGGGAAGCTCTCACTGCCATGATCCACAACAATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CCA 90 bp TCATTGTTGTGGATCATGGCAGTGAGAGCTTCCCCCTGGTCCAGACCTTGCCAAAGGGGCGACTCCTCGTaGAGGAGCGCCCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLLWIMAVRASPWSRPCQRGDSS*RSAQLW
Trigger: CCAGAGCTGGGCGCTCCTCCACGAGGAGTCGCCCCT...TTGGCAAGGTCTGGACCAGGGGGAAGCTCTCACTGCCATGATCCACAACAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR GCA 90 bp CCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGCGCGCGCACACTCGATaGGCTCCGAGTCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PTEPRIVSLHLSLRRGPMRAHTR*APSLPG
Trigger: TCCCGGGAGACTCGGAGCGCATCGAGTGTGCGCGCG...CATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp AGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTTAGACCTTGGCCCTCGGTGGTGGCCGTaGCTGTGTCCTGTAGCCGCG +
Preference number: 4 (lower is better)
Translates to: RIVSLHLSLRRGPMLDLGPRWWP*LCPVAA
Trigger: CGCGGCTACAGGACACAGCCACGGCCACCACCGAGG...GCCAAGGTCTAACATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp CTCCTTAGCTCCGCCAAGTTAAAGGCTCTTGCAAGGGCACTTAGAGATGTTGCCACGCGCGGAAGTCTGTaGCGTAGAAGAGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: LLSSAKLKALARALRDVATRGSL*RRRAAR
Trigger: GCGCGCTGCTCTTCTACGGCACAGACTTCCGCGCGT...GGCAACATCTCTAAGTGCCCTTGCAAGAGCCTTTAACTTGGCGGAGCTAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR GCA 90 bp CTGCTCTGTTTCATTGTTGTGGATCATGGCAGTGAGAGCTTCCCCCTGGTCCAGGGCACAGCGCCCAGGTaGATGGGACGCCACAGTTTT +
Preference number: 4 (lower is better)
Translates to: LLCFIVVDHGSESFPLVQGTAPR*MGRHSF
Trigger: AAAACTGTGGCGTCCCATGCACCTGGGCGCTGTGCC...CTGGACCAGGGGGAAGCTCTCACTGCCATGATCCACAACAATGAAACAGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CCA 90 bp CTCCTTAGCTCCGCCAAGTTAAAGGCTCTTGCAAGGGCACTTAGAGATGTTGCCTCCGCTACGGACCCATaGCCGCTGGCTGCACAGACA +
Preference number: 4 (lower is better)
Translates to: LLSSAKLKALARALRDVASATDP*PLAAQT
Trigger: TGTCTGTGCAGCCAGCGGCCATGGGTCCGTAGCGGA...GGCAACATCTCTAAGTGCCCTTGCAAGAGCCTTTAACTTGGCGGAGCTAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CCA 90 bp TCTGTTTCATTGTTGTGGATCATGGCAGTGAGAGCTTCCCCCTGGTCCAGACCTGAGTCTCCCGGGAAGTaGGGGAATAGCCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SVSLLWIMAVRASPWSRPESPGK*GNSPGL
Trigger: GAGCCCAGGGCTATTCCCCCACTTCCCGGGAGACTC...AGGTCTGGACCAGGGGGAAGCTCTCACTGCCATGATCCACAACAATGAAACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CCA 90 bp GAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTTAGACAGGGGCGACTCCTCGTaGAGGAGCGCCCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EPRIVSLHLSLRRGPMLDRGDSS*RSAQLW
Trigger: CCAGAGCTGGGCGCTCCTCCACGAGGAGTCGCCCCT...GTCTAACATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp GAAAAGACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGACTCCGCGCGTTCCATaGGCGGAGGCACCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: EKTVFIKGLCSGCSLCPMTPRVP*AEAPGG
Trigger: GCCGCCCGGTGCCTCCGCCCATGGAACGCGCGGAGT...CATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGTCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp TCTGTTTCATTGTTGTGGATCATGGCAGTGAGAGCTTCCCCCTGGTCCAGACCTGAGTCTACCGGGATGTaGCGCATGAGCTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: SVSLLWIMAVRASPWSRPESTGM*RMSSRT
Trigger: CGTGCGCGAGCTCATGCGCCACATCCCGGTAGACTC...AGGTCTGGACCAGGGGGAAGCTCTCACTGCCATGATCCACAACAATGAAACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CCA 90 bp TCTGTTTCATTGTTGTGGATCATGGCAGTGAGAGCTTCCCCCTGGTCCAGACCTGCTCTGGATCCTCGGTaGTGGCCGTGGCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SVSLLWIMAVRASPWSRPALDPR*WPWLCP
Trigger: AGGACACAGCCACGGCCACCACCGAGGATCCAGAGC...AGGTCTGGACCAGGGGGAAGCTCTCACTGCCATGATCCACAACAATGAAACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR GCA 90 bp AGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATGCGGCGTCCCAGAGCTaGGCGTCACCCCCACTGCGC +
Preference number: 4 (lower is better)
Translates to: SRNLTHLTSLVIKYSRKDAASQS*ASPPLR
Trigger: GCGCAGTGGGGGTGACGCGCAGCTCTGGGACGCCGC...ATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp ATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCAGGAGCGCCCAGCTCTaGTGCGCCAGGCGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: MDVLGFCFPLNQELYPSIRSAQL*CARRGS
Trigger: GCTGCCGCGCCTGGCGCACCAGAGCTGGGCGCTCCT...GATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp CCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTGGCTGCACAGACACTaGGCACCCCTAGAAGGACCA +
Preference number: 4 (lower is better)
Translates to: PTEPRIVSLHLSLRRGPMWLHRH*APLEGP
Trigger: TGGTCCTTCTAGGGGTGCTCAGTGTCTGTGCAGCCA...CATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp ACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGGTAGAACCGGGATGTGGCGCATaGGCTCGCGCACGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: TVFIKGLCSGCSLCPMVEPGCGA*ARARSG
Trigger: ACCGCTACGTGCGCGAGCTCATGCGCCACATCCCGG...TTCTACCATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp ACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGGTAGAACCTCGGTGGTGGCCGTaGCTGTGTCCTGTAGCCGCG +
Preference number: 4 (lower is better)
Translates to: TVFIKGLCSGCSLCPMVEPRWWP*LCPVAA
Trigger: CGCGGCTACAGGACACAGCCACGGCCACCACCGAGG...TTCTACCATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp CCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGGAAAGCCAAGAGCTCTaGATCCTCGGTGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: PTEPRIVSLHLSLRRGPMESQEL*ILGGGR
Trigger: ACGGCCACCACCGAGGATCCAGAGCTCTTGGCTTTC...CATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp CCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTGCCAAAGCCAGGTGTaGGCACTGGGCAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: PTEPRIVSLHLSLRRGPMCQSQV*ALGSPC
Trigger: ACATGGACTGCCCAGTGCCCACACCTGGCTTTGGCA...CATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp CGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATGAACGCGCGCACACTCGATaGGCTCCGAGTCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: RNLTHLTSLVIKYSRKDERAHTR*APSLPG
Trigger: TCCCGGGAGACTCGGAGCGCATCGAGTGTGCGCGCG...TTCATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp ATGAGGAGTCTGGGGAATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTCCGGGAGAGGCCGCGTaGGCTTTCTCGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: MRSLGNRTKVVSRNLTHLPGEAA*AFSASS
Trigger: GCTGGATGCCGAGAAAGCCCACGCGGCCTCTCCCGG...AAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATTCCCCAGACTCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp AGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTTAGACCTTGGCTCAGCAAGAAGTTGTTaGGGGGCGACTCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: RIVSLHLSLRRGPMLDLGSARSC*GATPRG
Trigger: TCCACGAGGAGTCGCCCCTCAACAACTTCTTGCTGA...GCCAAGGTCTAACATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp TCATTGTTGTGGATCATGGCAGTGAGAGCTTCCCCCTGGTCCAGACCTTGCCAAGAATCTCTTCCACATTaGCAAAGCCAGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SLLWIMAVRASPWSRPCQESLPH*QSQVWA
Trigger: TGCCCACACCTGGCTTTGGCAATGTGGAAGAGATTC...TTGGCAAGGTCTGGACCAGGGGGAAGCTCTCACTGCCATGATCCACAACAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CCA 90 bp ACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGGTAGAATCCGCTACGGACCCATaGCCGCTGGCTGCACAGACA +
Preference number: 4 (lower is better)
Translates to: TVFIKGLCSGCSLCPMVESATDP*PLAAQT
Trigger: TGTCTGTGCAGCCAGCGGCCATGGGTCCGTAGCGGA...TTCTACCATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp ACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGGTAGAAGAGTCTACCGGGATGTaGCGCATGAGCTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: TVFIKGLCSGCSLCPMVEESTGM*RMSSRT
Trigger: CGTGCGCGAGCTCATGCGCCACATCCCGGTAGACTC...TTCTACCATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp GAAAAGACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGGAGGGCTGGGCAATGTaGGGCTCAAAGACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EKTVFIKGLCSGCSLCPMEGWAM*GSKTGL
Trigger: CAGCCCCGTCTTTGAGCCCCACATTGCCCAGCCCTC...CATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp ACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGGTAGAATGGCACGTCGCAGTGTaGCTGCAGATAGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TVFIKGLCSGCSLCPMVEWHVAV*LQIEQR
Trigger: CCGCTGCTCTATCTGCAGTCACACTGCGACGTGCCA...TTCTACCATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp CTCCTTAGCTCCGCCAAGTTAAAGGCTCTTGCAAGGGCACTTAGAGATGTTGCCGAAGAAATTGGTTGGTaGTGCCCCCAGGTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LLSSAKLKALARALRDVAEEIGW*CPQVAC
Trigger: ACAAGCAACCTGGGGGCATCACCAACCAATTTCTTC...GGCAACATCTCTAAGTGCCCTTGCAAGAGCCTTTAACTTGGCGGAGCTAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CCA 90 bp ACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGGTAGAACTGGATCCTCGGTGGTaGCCGTGGCTGTGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: TVFIKGLCSGCSLCPMVELDPRW*PWLCPV
Trigger: TACAGGACACAGCCACGGCCACCACCGAGGATCCAG...TTCTACCATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
3UTR CAA 72 bp GATCATGGCAGTGAGAGCTTCCCCCTGGTCCAGACCTaGCCAATAATCTTGCAGCCACATCTCTTTCCAACT +
Preference number: 4 (lower is better)
Translates to: DHGSESFPLVQT*PIILQPHLFPT
Trigger: AGTTGGAAAGAGATGTGGCTGCAAGATTATTGGCAAGGTCTGGACCAGGGGGAAGCTCTCACTGCCATGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR TCA 90 bp CTGCTCTGTTTCATTGTTGTGGATCATGGCAGTGAGAGCTTCCCCCTGGTCCAGAATCATCAATCAGGATaGCGGAGTGATTGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: LLCFIVVDHGSESFPLVQNHQSG*RSDCSA
Trigger: TGCCGAACAATCACTCCGTCATCCTGATTGATGATT...CTGGACCAGGGGGAAGCTCTCACTGCCATGATCCACAACAATGAAACAGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR TCA 90 bp TCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCTGGGCAGTCCATGTGTaGGGGCTGGGCAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: SNGCFRVLFPTEPRIVSLWAVHV*GLGNVG
Trigger: CCCCACATTGCCCAGCCCTCACACATGGACTGCCCA...GAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp TCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCGAGTCTCCCGGGAAGTaGGGGAATAGCCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SNGCFRVLFPTEPRIVSLESPGK*GNSPGL
Trigger: GAGCCCAGGGCTATTCCCCCACTTCCCGGGAGACTC...GAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp ATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCCGGATGCCCGGGCCGTaGCTCAGCAAGAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: MDVLGFCFPLNQELYPSIRMPGP*LSKKLL
Trigger: CAACAACTTCTTGCTGAGCCACGGCCCGGGCATCCG...GATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp AGGAGTCTGGGGAATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTACTCGGATGCCCGGGCCGTaGCTCAGCAAGAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: RSLGNRTKVVSRNLTHLTRMPGP*LSKKLL
Trigger: CAACAACTTCTTGCTGAGCCACGGCCCGGGCATCCG...AGTAAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATTCCCCAGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp CTCCTTAGCTCCGCCAAGTTAAAGGCTCTTGCAAGGGCACTTAGAGATGTTGCCCTATCCAGAAGAAATTaGTTGGTGATGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLSSAKLKALARALRDVALSRRN*LVMPPG
Trigger: ACCTGGGGGCATCACCAACCAATTTCTTCTGGATAG...GGCAACATCTCTAAGTGCCCTTGCAAGAGCCTTTAACTTGGCGGAGCTAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CCA 90 bp AATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCCCGGGAGAGGCCGCGTaGGCTTTCTCGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: NRTKVVSRNLTHLTSLVIPGEAA*AFSASS
Trigger: GCTGGATGCCGAGAAAGCCCACGCGGCCTCTCCCGG...GATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp AGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATTGGCTGCACAGACACTaGGCACCCCTAGAAGGACCA +
Preference number: 4 (lower is better)
Translates to: SRNLTHLTSLVIKYSRKDWLHRH*APLEGP
Trigger: TGGTCCTTCTAGGGGTGCTCAGTGTCTGTGCAGCCA...ATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp TTGAATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCGGGATGTGGCGCATaGGCTCGCGCACGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: LNQMDVLGFCFPLNQELYPGCGA*ARARSG
Trigger: ACCGCTACGTGCGCGAGCTCATGCGCCACATCCCGG...ATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp AAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTTGGGCAGTCCATGTGTaGGGGCTGGGCAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: KVVSRNLTHLTSLVIKYSWAVHV*GLGNVG
Trigger: CCCCACATTGCCCAGCCCTCACACATGGACTGCCCA...ACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp AATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCGCTCTGGATCCTCGGTaGTGGCCGTGGCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: NQMDVLGFCFPLNQELYPALDPR*WPWLCP
Trigger: AGGACACAGCCACGGCCACCACCGAGGATCCAGAGC...GGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp ATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCCAGCGCCCAGGTGCATaGGACGCCACAGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: MDVLGFCFPLNQELYPSIQRPGA*DATVFL
Trigger: CAGAAAAACTGTGGCGTCCCATGCACCTGGGCGCTG...GATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp TCCGGAAAACCAGAATACAACTCACCAAATGTTTTGCTTCTCCACCAACGTAACCAGCGCCCAGGTGCATaGGACGCCACAGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SGKPEYNSPNVLLLHQRNQRPGA*DATVFL
Trigger: CAGAAAAACTGTGGCGTCCCATGCACCTGGGCGCTG...GTTACGTTGGTGGAGAAGCAAAACATTTGGTGAGTTGTATTCTGGTTTTCCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp TCATTGTTGTGGATCATGGCAGTGAGAGCTTCCCCCTGGTCCAGACCTTGCCAAATGGGGGTTGGATTATaGAACTGCAGCATAGTTATG +
Preference number: 4 (lower is better)
Translates to: SLLWIMAVRASPWSRPCQMGVGL*NCSIVM
Trigger: CATAACTATGCTGCAGTTCCATAATCCAACCCCCAT...TTGGCAAGGTCTGGACCAGGGGGAAGCTCTCACTGCCATGATCCACAACAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR GCA 90 bp AATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCACGCGCGGAAGTCTGTaGCGTAGAAGAGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: NRTKVVSRNLTHLTSLVITRGSL*RRRAAR
Trigger: GCGCGCTGCTCTTCTACGGCACAGACTTCCGCGCGT...GATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp CCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGAAAGTCAATAAACTCTaGCAGCTTCTGAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: PTEPRIVSLHLSLRRGPMKVNKL*QLLRRL
Trigger: GAGTCTCCTCAGAAGCTGGCAGAGTTTATTGACTTT...CATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp TGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTTAGACCTTGGCTACTCCCCAGGTTGCTTGTATaGCAGGTATTTCATATACTC +
Preference number: 4 (lower is better)
Translates to: CIPPSLLEERPYVRPWLLPRLLV*QVFHIL
Trigger: GAGTATATGAAATACCTGGCATACAAGCAACCTGGG...GAGTAGCCAAGGTCTAACATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp ATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCTCCATGTGTGAGGGCTaGGCAATGTGGGGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: MDVLGFCFPLNQELYPSISMCEG*AMWGSK
Trigger: CTTTGAGCCCCACATTGCCCAGCCCTCACACATGGA...GATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp TGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCGTGATGCCCCCAGGTTaGTTGTATGCCAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: CFRVLFPTEPRIVSLHLSVMPPG*LYARYF
Trigger: GAAATACCTGGCATACAAGCAACCTGGGGGCATCAC...GGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp GAAAAGACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGACTCCCCACTCCCGATaGTTCAGACTATCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: EKTVFIKGLCSGCSLCPMTPHSR*FRLSRR
Trigger: TCTTCTGGATAGTCTGAAGCATCGGGAGTGGGGAGT...CATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp TGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCCATAGTTATGAGTCCTaGCTTTTTCCGAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: CFRVLFPTEPRIVSLHLSHSYES*LFPSGA
Trigger: GGCCCCACTCGGAAAAAGGCAGGACTCATAACTATG...GGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CCA 90 bp AATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTGCCAAAGCCAGGTGTaGGCACTGGGCAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: NQMDVLGFCFPLNQELYPCQSQV*ALGSPC
Trigger: ACATGGACTGCCCAGTGCCCACACCTGGCTTTGGCA...GGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp CCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGCTTAAGCAGATACAGTaGTCTCTAACTTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: PTEPRIVSLHLSLRRGPMLKQIQ*SLTWTR
Trigger: TCTTGTCCAAGTTAGAGACCACTGTATCTGCTTAAG...CATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR TCA 90 bp ATCCATGAAAAGACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTATCAGGATGACGGAGTaGTTGTTCGGCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: IHEKTVFIKGLCSGCSLCIRMTE*LFGIQS
Trigger: GGACTGGATGCCGAACAATCACTCCGTCATCCTGAT...ACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGTCTTTTCATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp CCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGGATGTTGCCTCTTCATaGAGATTTCATGTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: PTEPRIVSLHLSLRRGPMDVASS*RFHVGN
Trigger: ATTACCTACATGAAATCTTCATGAAGAGGCAACATC...CATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp TTGAATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATGGCACAGCGCCCAGGTaGATGGGACGCCACAGTTTT +
Preference number: 4 (lower is better)
Translates to: LNQMDVLGFCFPLNQELYGTAPR*MGRHSF
Trigger: AAAACTGTGGCGTCCCATGCACCTGGGCGCTGTGCC...ATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp GAAAAGACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGGGTTTGTGCAGTGGATaGTCCTTATGTCCCATGGTA +
Preference number: 4 (lower is better)
Translates to: EKTVFIKGLCSGCSLCPMGLCSG*SLCPMV
Trigger: TACCATGGGACATAAGGAGCATCCACTGCACAAACC...CATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp TTGAATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCTGGATCCTCGGTGGTaGCCGTGGCTGTGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LNQMDVLGFCFPLNQELYLDPRW*PWLCPV
Trigger: TACAGGACACAGCCACGGCCACCACCGAGGATCCAG...ATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp AATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCGAAAGCCAAGAGCTCTaGATCCTCGGTGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: NRTKVVSRNLTHLTSLVIESQEL*ILGGGR
Trigger: ACGGCCACCACCGAGGATCCAGAGCTCTTGGCTTTC...GATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp AAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTTCCATGTGTGAGGGCTaGGCAATGTGGGGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: KVVSRNLTHLTSLVIKYSSMCEG*AMWGSK
Trigger: CTTTGAGCCCCACATTGCCCAGCCCTCACACATGGA...ACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp GAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTTAGACTCTGTTTCATTGTTGTaGATCATGGCAGTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: EPRIVSLHLSLRRGPMLDSVSLL*IMAVRA
Trigger: AGCTCTCACTGCCATGATCCACAACAATGAAACAGA...GTCTAACATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
3UTR CAA 72 bp GAGAGCTTCCCCCTGGTCCAGACCTTGCCAATAATCTaGCAGCCACATCTCTTTCCAACTGAAATATCAAAA +
Preference number: 4 (lower is better)
Translates to: ESFPLVQTLPII*QPHLFPTEISK
Trigger: TTTTGATATTTCAGTTGGAAAGAGATGTGGCTGCAAGATTATTGGCAAGGTCTGGACCAGGGGGAAGCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR TCA 90 bp TGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCAATCATCAATCAGGATaGCGGAGTGATTGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: CFRVLFPTEPRIVSLHLSNHQSG*RSDCSA
Trigger: TGCCGAACAATCACTCCGTCATCCTGATTGATGATT...GGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp GAAAAGACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGAACTCTGCCAGCTTCTaGGGAGACTCAAAATCATCA +
Preference number: 4 (lower is better)
Translates to: EKTVFIKGLCSGCSLCPMNSASF*GDSKSS
Trigger: TGATGATTTTGAGTCTCCTCAGAAGCTGGCAGAGTT...CATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp AGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTTAGACCTTGGCACATCTCTTTCCAACTaGAATATCAAAATGGGGGTT +
Preference number: 4 (lower is better)
Translates to: RIVSLHLSLRRGPMLDLGTSLSN*NIKMGV
Trigger: AACCCCCATTTTGATATTTCAGTTGGAAAGAGATGT...GCCAAGGTCTAACATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR GCA 90 bp CTTGAGGAGAGGCCCTATGTTAGACCTTGGCTACTCATCATTAAGATAAAATCTGAATCTCTTCCACATTaGCAAAGCCAGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LEERPYVRPWLLIIKIKSESLPH*QSQVWA
Trigger: TGCCCACACCTGGCTTTGGCAATGTGGAAGAGATTC...AGATTTTATCTTAATGATGAGTAGCCAAGGTCTAACATAGGGCCTCTCCTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp ATGAGGAGTCTGGGGAATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTGGTTTGTGCAGTGGATaGTCCTTATGTCCCATGGTA +
Preference number: 4 (lower is better)
Translates to: MRSLGNRTKVVSRNLTHLGLCSG*SLCPMV
Trigger: TACCATGGGACATAAGGAGCATCCACTGCACAAACC...AAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATTCCCCAGACTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp ACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGGTAGAATGTAGTCGTTACAGATaGCATTTTCCAGGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: TVFIKGLCSGCSLCPMVECSRYR*HFPGPS
Trigger: ACTTGGCCCTGGAAAATGCCATCTGTAACGACTACA...TTCTACCATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp TTGAATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATTCAGCAAGAAGTTGTTaGGGGGCGACTCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LNQMDVLGFCFPLNQELYSARSC*GATPRG
Trigger: TCCACGAGGAGTCGCCCCTCAACAACTTCTTGCTGA...ATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp AGGAGTCTGGGGAATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTACTAACTCTGCCAGCTTCTaGGGAGACTCAAAATCATCA +
Preference number: 4 (lower is better)
Translates to: RSLGNRTKVVSRNLTHLTNSASF*GDSKSS
Trigger: TGATGATTTTGAGTCTCCTCAGAAGCTGGCAGAGTT...AGTAAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATTCCCCAGACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp TCCGGAAAACCAGAATACAACTCACCAAATGTTTTGCTTCTCCACCAACGTAACGGTTCTGTTTCCCACTaGACCAAGAATTGTATCCCT +
Preference number: 4 (lower is better)
Translates to: SGKPEYNSPNVLLLHQRNGSVSH*TKNCIP
Trigger: AGGGATACAATTCTTGGTTCAGTGGGAAACAGAACC...GTTACGTTGGTGGAGAAGCAAAACATTTGGTGAGTTGTATTCTGGTTTTCCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp TTGAATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATATCAGGATGACGGAGTaGTTGTTCGGCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LNQMDVLGFCFPLNQELYIRMTE*LFGIQS
Trigger: GGACTGGATGCCGAACAATCACTCCGTCATCCTGAT...ATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp AATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCGAAGAAATTGGTTGGTaGTGCCCCCAGGTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: NRTKVVSRNLTHLTSLVIEEIGW*CPQVAC
Trigger: ACAAGCAACCTGGGGGCATCACCAACCAATTTCTTC...GATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp TCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCGGTTCTGTTTCCCACTaGACCAAGAATTGTATCCCT +
Preference number: 4 (lower is better)
Translates to: SNGCFRVLFPTEPRIVSLGSVSH*TKNCIP
Trigger: AGGGATACAATTCTTGGTTCAGTGGGAAACAGAACC...GAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp AGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATCCCAGGTTGCTTGTATaGCAGGTATTTCATATACTC +
Preference number: 4 (lower is better)
Translates to: SRNLTHLTSLVIKYSRKDPRLLV*QVFHIL
Trigger: GAGTATATGAAATACCTGGCATACAAGCAACCTGGG...ATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp AATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCACTCCCCACTCCCGATaGTTCAGACTATCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: NRTKVVSRNLTHLTSLVITPHSR*FRLSRR
Trigger: TCTTCTGGATAGTCTGAAGCATCGGGAGTGGGGAGT...GATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp ATAATGAGGAGTCTGGGGAATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATTGTAGTCGTTACAGATaGCATTTTCCAGGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: IMRSLGNRTKVVSRNLTHCSRYR*HFPGPS
Trigger: ACTTGGCCCTGGAAAATGCCATCTGTAACGACTACA...ATGGGTCAGGTTACGACTTACAACTTTTGTTCTATTCCCCAGACTCCTCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp AAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCTATCCAGAAGAAATTaGTTGGTGATGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KVVSRNLTHLTSLVIKYSLSRRN*LVMPPG
Trigger: ACCTGGGGGCATCACCAACCAATTTCTTCTGGATAG...ACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp CGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATGAATCTGTTTCATTGTTGTaGATCATGGCAGTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RNLTHLTSLVIKYSRKDESVSLL*IMAVRA
Trigger: AGCTCTCACTGCCATGATCCACAACAATGAAACAGA...TTCATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp CTTGAGGAGAGGCCCTATGTTAGACCTTGGCTACTCATCATTAAGATAAAATCTTATTGGGAAATGTACTaGATAATGAGGAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LEERPYVRPWLLIIKIKSYWEMY*IMRSLG
Trigger: CCCCAGACTCCTCATTATTCAGTACATTTCCCAATA...AGATTTTATCTTAATGATGAGTAGCCAAGGTCTAACATAGGGCCTCTCCTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp TTGAATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATGTGATGCCCCCAGGTTaGTTGTATGCCAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: LNQMDVLGFCFPLNQELYVMPPG*LYARYF
Trigger: GAAATACCTGGCATACAAGCAACCTGGGGGCATCAC...ATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp AGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATTCCCAAAATTTCGTCTaGTCTGTTTCATTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SRNLTHLTSLVIKYSRKDSQNFV*SVSLLW
Trigger: CCACAACAATGAAACAGAGCAGACGAAATTTTGGGA...ATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp ATGAGGAGTCTGGGGAATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTTCCCAAAATTTCGTCTaGTCTGTTTCATTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: MRSLGNRTKVVSRNLTHLSQNFV*SVSLLW
Trigger: CCACAACAATGAAACAGAGCAGACGAAATTTTGGGA...AAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATTCCCCAGACTCCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp GAAAAGACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGCCCTATGTTAGACCTTaGCTACTCATCATTAAGATA +
Preference number: 4 (lower is better)
Translates to: EKTVFIKGLCSGCSLCPMPYVRP*LLIIKI
Trigger: TATCTTAATGATGAGTAGCCAAGGTCTAACATAGGG...CATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGTCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CCA 90 bp ACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTCCCATGGTAGAACCCTATGTTAGACCTTaGCTACTCATCATTAAGATA +
Preference number: 4 (lower is better)
Translates to: TVFIKGLCSGCSLCPMVEPYVRP*LLIIKI
Trigger: TATCTTAATGATGAGTAGCCAAGGTCTAACATAGGG...TTCTACCATGGGACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp ATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCAAAACTGGAATTCCTTaGATCCATGAAAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: MDVLGFCFPLNQELYPSIKTGIP*IHEKTV
Trigger: CACTGTCTTTTCATGGATTCAAGGAATTCCAGTTTT...GATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp AAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTTATTGGGAAATGTACTaGATAATGAGGAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KVVSRNLTHLTSLVIKYSYWEMY*IMRSLG
Trigger: CCCCAGACTCCTCATTATTCAGTACATTTCCCAATA...ACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp CTTGAGGAGAGGCCCTATGTTAGACCTTGGCTACTCATCATTAAGATAAAATCTTTCATTAAGGGTTTGTaGAGTGGATGCTCCTTATGT +
Preference number: 4 (lower is better)
Translates to: LEERPYVRPWLLIIKIKSFIKGL*SGCSLC
Trigger: ACATAAGGAGCATCCACTGCACAAACCCTTAATGAA...AGATTTTATCTTAATGATGAGTAGCCAAGGTCTAACATAGGGCCTCTCCTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR TCA 90 bp CATGTAGGTAATCCCAAAATTTCGTCTGCTCTGTTTCATTGTTGTGGATCATGGGATGTTGCCTCTTCATaGAGATTTCATGTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: HVGNPKISSALFHCCGSWDVASS*RFHVGN
Trigger: ATTACCTACATGAAATCTTCATGAAGAGGCAACATC...CCATGATCCACAACAATGAAACAGAGCAGACGAAATTTTGGGATTACCTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR GCA 90 bp AATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAAGTCAATAAACTCTaGCAGCTTCTGAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: NRTKVVSRNLTHLTSLVIKVNKL*QLLRRL
Trigger: GAGTCTCCTCAGAAGCTGGCAGAGTTTATTGACTTT...GATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp AAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTTTCATTAAGGGTTTGTaGAGTGGATGCTCCTTATGT +
Preference number: 4 (lower is better)
Translates to: KVVSRNLTHLTSLVIKYSFIKGL*SGCSLC
Trigger: ACATAAGGAGCATCCACTGCACAAACCCTTAATGAA...ACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR GCA 90 bp AAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTGTTGGATTATGGAACTaGAGCATAGTTATGAGTCCT +
Preference number: 4 (lower is better)
Translates to: KVVSRNLTHLTSLVIKYSVGLWN*SIVMSP
Trigger: AGGACTCATAACTATGCTGCAGTTCCATAATCCAAC...ACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CCA 90 bp TCCGGAAAACCAGAATACAACTCACCAAATGTTTTGCTTCTCCACCAACGTAACACTGAAATATCAAAATaGGGGTTGGATTATGGAACT +
Preference number: 4 (lower is better)
Translates to: SGKPEYNSPNVLLLHQRNTEISK*GLDYGT
Trigger: AGTTCCATAATCCAACCCCCATTTTGATATTTCAGT...GTTACGTTGGTGGAGAAGCAAAACATTTGGTGAGTTGTATTCTGGTTTTCCGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR TCA 90 bp CTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATGAAATAAAGAAAACTGGAATTCCTTaGATCCATGAAAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: LTHLTSLVIKYSRKDEIKKTGIP*IHEKTV
Trigger: CACTGTCTTTTCATGGATTCAAGGAATTCCAGTTTT...CTTTATTTCATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS CCA 90 bp AGAGCAGCGGCGCGTAGCCGCGGCGGCGCCACTCCGCGCGTTCCATaGGCGGAGGCACCGGGCGGCGCAGATAGGCGGTCCCGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RAAARSRGGATPRVP*AEAPGGADRRSRAA
Trigger: GGCTGCCCGGGACCGCCTATCTGCGCCGCCCGGTGCCTCCGCCCATGGAACGCGCGGAGTGGCGCCGCCGCGGCTACGCGCCGCTGCTCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS GCA 90 bp CTCGGCGGTTCCGGGACGCCACGCACGCGCCGCGCGCACACTCGATaGGCTCCGAGTCTCCCGGGAAGTGGGGGAATAGCCCTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LGGSGTPRTRRAHTR*APSLPGSGGIALGS
Trigger: GGAGCCCAGGGCTATTCCCCCACTTCCCGGGAGACTCGGAGCGCATCGAGTGTGCGCGCGGCGCGTGCGTGGCGTCCCGGAACCGCCGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CCA 90 bp CCCGGGCCGTGGCTCAGCAAGAAGTTGTTGAGGGGCGACTCCTCGTaGAGGAGCGCCCAGCTCTGGTGCGCCAGGCGCGGCAGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: PGPWLSKKLLRGDSS*RSAQLWCARRGSGA
Trigger: CGCCCCGCTGCCGCGCCTGGCGCACCAGAGCTGGGCGCTCCTCCACGAGGAGTCGCCCCTCAACAACTTCTTGCTGAGCCACGGCCCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS TCA 90 bp GAGCTCGCGCACGTAGCGGTCCCGGTCCGCTGGCACGTCGCAGTGTaGCTGCAGATAGAGCAGCGGCGCGTAGCCGCGGCGGCGCCACTC +
Preference number: 5 (lower is better)
Translates to: ELAHVAVPVRWHVAV*LQIEQRRVAAAAPL
Trigger: GAGTGGCGCCGCCGCGGCTACGCGCCGCTGCTCTATCTGCAGTCACACTGCGACGTGCCAGCGGACCGGGACCGCTACGTGCGCGAGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS GCA 90 bp AAGTTGTTGAGGGGCGACTCCTCGTGGAGGAGCGCCCAGCTCTGGTaGGCCAGGCGCGGCAGCGGGGCGGCCGACGCGCGGAAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: KLLRGDSSWRSAQLW*ARRGSGAADARKSV
Trigger: CACAGACTTCCGCGCGTCGGCCGCCCCGCTGCCGCGCCTGGCGCACCAGAGCTGGGCGCTCCTCCACGAGGAGTCGCCCCTCAACAACTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CCA 90 bp CACGCGCCGCGCGCACACTCGATGCGCTCCGAGTCTCCCGGGAAGTaGGGGAATAGCCCTGGGCTCCACCACAGCAGTACCGGCAAGTCC +
Preference number: 5 (lower is better)
Translates to: HAPRAHSMRSESPGK*GNSPGLHHSSTGKS
Trigger: GGACTTGCCGGTACTGCTGTGGTGGAGCCCAGGGCTATTCCCCCACTTCCCGGGAGACTCGGAGCGCATCGAGTGTGCGCGCGGCGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS CCA 90 bp CCAGGTGTGGGCACTGGGCAGTCCATGTGTGAGGGCTGGGCAATGTaGGGCTCAAAGACGGGGCTGTCCCCGGGAGAGGCCGCGTGGGCT +
Preference number: 5 (lower is better)
Translates to: PGVGTGQSMCEGWAM*GSKTGLSPGEAAWA
Trigger: AGCCCACGCGGCCTCTCCCGGGGACAGCCCCGTCTTTGAGCCCCACATTGCCCAGCCCTCACACATGGACTGCCCAGTGCCCACACCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
ENST00000489264.2
CDS CCA 90 bp CGACTGAAGGTGGAGGTAAGATTGAAGAGGCGGATGCCCGGGCCGTaGCTCAGCAAGAAGTTGTTGAGGGGCGACTCCTCGTGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: RLKVEVRLKRRMPGP*LSKKLLRGDSSWRS
Trigger: GCTCCTCCACGAGGAGTCGCCCCTCAACAACTTCTTGCTGAGCCACGGCCCGGGCATCCGCCTCTTCAATCTTACCTCCACCTTCAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CCA 90 bp TCACAGAGGGAGAACCGCGGTACACGGGCACAGCGCCCAGGTGCATaGGACGCCACAGTTTTTCTGTCATGTAGTCGTTACAGATGGCAT +
Preference number: 5 (lower is better)
Translates to: SQRENRGTRAQRPGA*DATVFLSCSRYRWH
Trigger: ATGCCATCTGTAACGACTACATGACAGAAAAACTGTGGCGTCCCATGCACCTGGGCGCTGTGCCCGTGTACCGCGGTTCTCCCTCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS-3UTR CAA 90 bp CCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGCTCAGCAAGAAGTTGTaGAGGGGCGACTCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: PTEPRIVSLHLSLRRGPMLSKKL*RGDSSW
Trigger: CCACGAGGAGTCGCCCCTCAACAACTTCTTGCTGAG...CATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp AGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTTAGACCTTGGCCCCCTGGTCCAGACCTaGCCAATAATCTTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: RIVSLHLSLRRGPMLDLGPLVQT*PIILQP
Trigger: TGGCTGCAAGATTATTGGCAAGGTCTGGACCAGGGG...GCCAAGGTCTAACATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS TCA 90 bp CTCCCCACTCCCGATGCTTCAGACTATCCAGAAGAAATTGGTTGGTaGTGCCCCCAGGTTGCTTGTATGCCAGGTATTTCATATACTCCT +
Preference number: 5 (lower is better)
Translates to: LPTPDASDYPEEIGW*CPQVACMPGISYTP
Trigger: AGGAGTATATGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGTCTGAAGCATCGGGAGTGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS-3UTR CAA 90 bp AGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATAAGGTGGAGGTAAGATaGAAGAGGCGGATGCCCGGG +
Preference number: 5 (lower is better)
Translates to: SRNLTHLTSLVIKYSRKDKVEVR*KRRMPG
Trigger: CCCGGGCATCCGCCTCTTCAATCTTACCTCCACCTT...ATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp CTCCTTAGCTCCGCCAAGTTAAAGGCTCTTGCAAGGGCACTTAGAGATGTTGCCACCTTGCCAATAATCTaGCAGCCACATCTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: LLSSAKLKALARALRDVATLPII*QPHLFP
Trigger: TGGAAAGAGATGTGGCTGCAAGATTATTGGCAAGGT...GGCAACATCTCTAAGTGCCCTTGCAAGAGCCTTTAACTTGGCGGAGCTAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS CCA 90 bp TCATTCACTCCCCACTCCCGATGCTTCAGACTATCCAGAAGAAATTaGTTGGTGATGCCCCCAGGTTGCTTGTATGCCAGGTATTTCATA +
Preference number: 5 (lower is better)
Translates to: SFTPHSRCFRLSRRN*LVMPPGCLYARYFI
Trigger: TATGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGTCTGAAGCATCGGGAGTGGGGAGTGAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS-3UTR CAA 90 bp ATAATGAGGAGTCTGGGGAATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTCAGCAAGAAGTTGTaGAGGGGCGACTCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: IMRSLGNRTKVVSRNLTHLSKKL*RGDSSW
Trigger: CCACGAGGAGTCGCCCCTCAACAACTTCTTGCTGAG...ATGGGTCAGGTTACGACTTACAACTTTTGTTCTATTCCCCAGACTCCTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp CTTGAGGAGAGGCCCTATGTTAGACCTTGGCTACTCATCATTAAGATAAAATCTAAGGTGGAGGTAAGATaGAAGAGGCGGATGCCCGGG +
Preference number: 5 (lower is better)
Translates to: LEERPYVRPWLLIIKIKSKVEVR*KRRMPG
Trigger: CCCGGGCATCCGCCTCTTCAATCTTACCTCCACCTT...AGATTTTATCTTAATGATGAGTAGCCAAGGTCTAACATAGGGCCTCTCCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp TGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCTCCAGAAGAAATTGGTaGGTGATGCCCCCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: CFRVLFPTEPRIVSLHLSSRRNW*VMPPGC
Trigger: GCAACCTGGGGGCATCACCAACCAATTTCTTCTGGA...GGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp TCCGGAAAACCAGAATACAACTCACCAAATGTTTTGCTTCTCCACCAACGTAACGGAATCTCTTCCACATaGCCAAAGCCAGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: SGKPEYNSPNVLLLHQRNGISST*PKPGVG
Trigger: GCCCACACCTGGCTTTGGCAATGTGGAAGAGATTCC...GTTACGTTGGTGGAGAAGCAAAACATTTGGTGAGTTGTATTCTGGTTTTCCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp CGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATGAACCCCTGGTCCAGACCTaGCCAATAATCTTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: RNLTHLTSLVIKYSRKDEPLVQT*PIILQP
Trigger: TGGCTGCAAGATTATTGGCAAGGTCTGGACCAGGGG...TTCATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS TCA 90 bp GGAATAAAGGAGAAAGTCTGGAAAGCACCAAGCACAAAGCAGGCCTaGGGCTCCAGCAACAGTCATTCAGAAACAACTGCCCACTTTATA +
Preference number: 5 (lower is better)
Translates to: GIKEKVWKAPSTKQA*GSSNSHSETTAHFI
Trigger: TATAAAGTGGGCAGTTGTTTCTGAATGACTGTTGCTGGAGCCTCAGGCCTGCTTTGTGCTTGGTGCTTTCCAGACTTTCTCCTTTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489264.2
CDS-3UTR CAA 90 bp TCCGGAAAACCAGAATACAACTCACCAAATGTTTTGCTTCTCCACCAACGTAACGGTGATGCCCCCAGGTaGCTTGTATGCCAGGTATTT +
Preference number: 5 (lower is better)
Translates to: SGKPEYNSPNVLLLHQRNGDAPR*LVCQVF
Trigger: AAATACCTGGCATACAAGCAACCTGGGGGCATCACC...GTTACGTTGGTGGAGAAGCAAAACATTTGGTGAGTTGTATTCTGGTTTTCCGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp TGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCTCTCCACTATCCAGAAGAAATaGGTTGGTGATGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: CFRVLFPTEPRIVSLHLSTIQKK*VGDAPR
Trigger: CCTGGGGGCATCACCAACCAATTTCTTCTGGATAGT...GGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp GAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTTAGACGGGCACTTAGAGATGTaGCCTCTTCATGAAGATTTC +
Preference number: 5 (lower is better)
Translates to: EPRIVSLHLSLRRGPMLDGHLEM*PLHEDF
Trigger: GAAATCTTCATGAAGAGGCAACATCTCTAAGTGCCC...GTCTAACATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp AGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTTAGACCTTGGCAACTCACCAAATGTTTaGCTTCTCCACCAACGTAAC +
Preference number: 5 (lower is better)
Translates to: RIVSLHLSLRRGPMLDLGNSPNV*LLHQRN
Trigger: GTTACGTTGGTGGAGAAGCAAAACATTTGGTGAGTT...GCCAAGGTCTAACATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS CCA 90 bp CTGCCTTTTTCCGAGTGGGGCCAAAGAAATCTTAAGCAGATACAGTaGTCTCTAACTTGGACAAGACTGCTGTCATTCTCAGGAATCTCT +
Preference number: 5 (lower is better)
Translates to: LPFSEWGQRNLKQIQ*SLTWTRLLSFSGIS
Trigger: AGAGATTCCTGAGAATGACAGCAGTCTTGTCCAAGTTAGAGACCACTGTATCTGCTTAAGATTTCTTTGGCCCCACTCGGAAAAAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CAA 90 bp AATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATCTTACTTCACTGGTAATCTGGCTCAGCAAGAAGTaGTTGAGGGGCGACTCCTCG +
Preference number: 5 (lower is better)
Translates to: NRTKVVSRNLTHLTSLVIWLSKK*LRGDSS
Trigger: CGAGGAGTCGCCCCTCAACAACTTCTTGCTGAGCCA...GATTACCAGTGAAGTAAGATGGGTCAGGTTACGACTTACAACTTTTGTTCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp ATCCATGAAAAGACAGTGTTCATTAAGGGTTTGTGCAGTGGATGCTCCTTATGTTCCAGAAGAAATTGGTaGGTGATGCCCCCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: IHEKTVFIKGLCSGCSLCSRRNW*VMPPGC
Trigger: GCAACCTGGGGGCATCACCAACCAATTTCTTCTGGA...ACATAAGGAGCATCCACTGCACAAACCCTTAATGAACACTGTCTTTTCATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS GCA 90 bp TGCTTCAGACTATCCAGAAGAAATTGGTTGGTGATGCCCCCAGGTTaGTTGTATGCCAGGTATTTCATATACTCCTCATCATTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: CFRLSRRNWLVMPPG*LYARYFIYSSSFLS
Trigger: GGACAAGAATGATGAGGAGTATATGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGTCTGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS GCA 90 bp TATACAGCAGCAGGCTGGGCCCCAAATCAGAAGATTCATGTTGCTTaGTTTCTCTATAGGGAAAGTGAAGCTTTCGGTAAGTATCATGTG +
Preference number: 5 (lower is better)
Translates to: YTAAGWAPNQKIHVA*FLYRESEAFGKYHV
Trigger: CACATGATACTTACCGAAAGCTTCACTTTCCCTATAGAGAAAGCAAGCAACATGAATCTTCTGATTTGGGGCCCAGCCTGCTGCTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489264.2
CDS-3UTR CAA 90 bp GTCCAGACCTTGCCAATAATCTTGCAGCCACATCTCTTTCCAACTGAAATATCAATGCCCCCAGGTTGCTaGTATGCCAGGTATTTCATA +
Preference number: 5 (lower is better)
Translates to: VQTLPIILQPHLFPTEISMPPGC*YARYFI
Trigger: TATGAAATACCTGGCATACAAGCAACCTGGGGGCAT...TGATATTTCAGTTGGAAAGAGATGTGGCTGCAAGATTATTGGCAAGGTCTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CAA 90 bp CTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATGAAATAAAGGGTGATGCCCCCAGGTaGCTTGTATGCCAGGTATTT +
Preference number: 5 (lower is better)
Translates to: LTHLTSLVIKYSRKDEIKGDAPR*LVCQVF
Trigger: AAATACCTGGCATACAAGCAACCTGGGGGCATCACC...CTTTATTTCATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp AGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATCCACTGAACCAAGAATaGTATCCCTCCATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: SRNLTHLTSLVIKYSRKDPLNQE*YPSISP
Trigger: AGGAGAGATGGAGGGATACAATTCTTGGTTCAGTGG...ATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp GAACCAAGAATTGTATCCCTCCATCTCTCCTTGAGGAGAGGCCCTATGTTAGACTGTTGGACCAGCACCTaGAATCAAATGGATGTTTTA +
Preference number: 5 (lower is better)
Translates to: EPRIVSLHLSLRRGPMLDCWTST*NQMDVL
Trigger: TAAAACATCCATTTGATTCAAGGTGCTGGTCCAACA...GTCTAACATAGGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS GCA 90 bp ACTATCCAGAAGAAATTGGTTGGTGATGCCCCCAGGTTGCTTGTATaGCAGGTATTTCATATACTCCTCATCATTCTTGTCCAGAAAGTC +
Preference number: 5 (lower is better)
Translates to: TIQKKLVGDAPRLLV*QVFHILLIILVQKV
Trigger: GACTTTCTGGACAAGAATGATGAGGAGTATATGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS GCA 90 bp AGATACAAATTACTTGGTGAAGGATTCCAACCATCAGGACAAAACTaGCAGCAGCATCTGTTAATAAATGGCCTTCTGCTGCCATCCACT +
Preference number: 5 (lower is better)
Translates to: RYKLLGEGFQPSGQN*QQHLLINGLLLPST
Trigger: AGTGGATGGCAGCAGAAGGCCATTTATTAACAGATGCTGCTGGCAGTTTTGTCCTGATGGTTGGAATCCTTCACCAAGTAATTTGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465695.1
CDS-3UTR CAA 90 bp ATAATGAGGAGTCTGGGGAATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATATGCCCCCAGGTTGCTaGTATGCCAGGTATTTCATA +
Preference number: 5 (lower is better)
Translates to: IMRSLGNRTKVVSRNLTHMPPGC*YARYFI
Trigger: TATGAAATACCTGGCATACAAGCAACCTGGGGGCAT...ATGGGTCAGGTTACGACTTACAACTTTTGTTCTATTCCCCAGACTCCTCATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp TTGAATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATGGAATCTCTTCCACATaGCCAAAGCCAGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: LNQMDVLGFCFPLNQELYGISST*PKPGVG
Trigger: GCCCACACCTGGCTTTGGCAATGTGGAAGAGATTCC...ATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp CGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATGAAACCTTGCCAATAATCTaGCAGCCACATCTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: RNLTHLTSLVIKYSRKDETLPII*QPHLFP
Trigger: TGGAAAGAGATGTGGCTGCAAGATTATTGGCAAGGT...TTCATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp AGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATTGCTCTGTTTCATTGTaGTGGATCATGGCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: SRNLTHLTSLVIKYSRKDCSVSL*WIMAVR
Trigger: TCTCACTGCCATGATCCACAACAATGAAACAGAGCA...ATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp AGTCGTAACCTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATGTGTTCATTAAGGGTTaGTGCAGTGGATGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: SRNLTHLTSLVIKYSRKDVFIKG*CSGCSL
Trigger: TAAGGAGCATCCACTGCACAAACCCTTAATGAACAC...ATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAGGTTACGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS TCA 90 bp GCAACAGTCATTCAGAAACAACTGCCCACTTTATACGTAAAAGTATaGAAGGAATGCCAATGTGAGCCCATGTCATTAGGAGAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: ATVIQKQLPTLYVKV*KECQCEPMSLGEVR
Trigger: CCTTACCTCTCCTAATGACATGGGCTCACATTGGCATTCCTTTCATACTTTTACGTATAAAGTGGGCAGTTGTTTCTGAATGACTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489264.2
CDS-3UTR CAA 90 bp TCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCGTGTTCATTAAGGGTTaGTGCAGTGGATGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: SNGCFRVLFPTEPRIVSLVFIKG*CSGCSL
Trigger: TAAGGAGCATCCACTGCACAAACCCTTAATGAACAC...GAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp TCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCACAGTGGTCTCTAACTaGGACAAGACTGCTGTCATT +
Preference number: 5 (lower is better)
Translates to: SNGCFRVLFPTEPRIVSLTVVSN*DKTAVI
Trigger: AATGACAGCAGTCTTGTCCAAGTTAGAGACCACTGT...GAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS-3UTR CAA 90 bp ATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCATATCAAAATGGGGGTaGGATTATGGAACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: MDVLGFCFPLNQELYPSIISKWG*DYGTAA
Trigger: TGCTGCAGTTCCATAATCCAACCCCCATTTTGATAT...GATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS CCA 90 bp TCTGCACAGGCCCTGTACTCTGGTTCAATCTTTTTGAACCACTACTaGAAACATTGTTCACATAAGCTGATTTTCATACGTTGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: SAQALYSGSIFLNHY*KHCSHKLIFIRCLE
Trigger: TTCAAGGCAACGTATGAAAATCAGCTTATGTGAACAATGTTTCCAGTAGTGGTTCAAAAAGATTGAACCAGAGTACAGGGCCTGTGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465695.1
CDS-3UTR CAA 90 bp TCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCAACTCACCAAATGTTTaGCTTCTCCACCAACGTAAC +
Preference number: 5 (lower is better)
Translates to: SNGCFRVLFPTEPRIVSLNSPNV*LLHQRN
Trigger: GTTACGTTGGTGGAGAAGCAAAACATTTGGTGAGTT...GAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp ATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCCATCTACTCCTCATCATTCTaGTCCAGAAAGTCAATAAAC +
Preference number: 5 (lower is better)
Translates to: MDVLGFCFPLNQELYPSIYSSSF*SRKSIN
Trigger: GTTTATTGACTTTCTGGACAAGAATGATGAGGAGTA...GATGGAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp TTGAATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCACTGAACCAAGAATaGTATCCCTCCATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LNQMDVLGFCFPLNQELYPLNQE*YPSISP
Trigger: AGGAGAGATGGAGGGATACAATTCTTGGTTCAGTGG...ATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp ATAATGAGGAGTCTGGGGAATAGAACAAAAGTTGTAAGTCGTAACCTGACCCATAGTTTAAAAACTCTGTaGGACCAGCACCTTGAATCA +
Preference number: 5 (lower is better)
Translates to: IMRSLGNRTKVVSRNLTHSLKTL*DQHLES
Trigger: TGATTCAAGGTGCTGGTCCAACAGAGTTTTTAAACT...ATGGGTCAGGTTACGACTTACAACTTTTGTTCTATTCCCCAGACTCCTCATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS GCA 90 bp CCTGGTTCTACTTTCCCTTGTGGAAATGTAATACCTGGTTTACACTaGTCTTTTGTGAGTACGTATATGGTGATAGGAATAAAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: PGSTFPCGNVIPGLH*SFVSTYMVIGIKEK
Trigger: TTTCTCCTTTATTCCTATCACCATATACGTACTCACAAAAGAGCAGTGTAAACCAGGTATTACATTTCCACAAGGGAAAGTAGAACCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489264.2
CDS-3UTR CAA 90 bp TCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATCCCTCTACTCCTCATCATTCTaGTCCAGAAAGTCAATAAAC +
Preference number: 5 (lower is better)
Translates to: SNGCFRVLFPTEPRIVSLYSSSF*SRKSIN
Trigger: GTTTATTGACTTTCTGGACAAGAATGATGAGGAGTA...GAGGGATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp TTGAATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATTGCTCTGTTTCATTGTaGTGGATCATGGCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: LNQMDVLGFCFPLNQELYCSVSL*WIMAVR
Trigger: TCTCACTGCCATGATCCACAACAATGAAACAGAGCA...ATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp TTGAATCAAATGGATGTTTTAGGGTTCTGTTTCCCACTGAACCAAGAATTGTATGGGCACTTAGAGATGTaGCCTCTTCATGAAGATTTC +
Preference number: 5 (lower is better)
Translates to: LNQMDVLGFCFPLNQELYGHLEM*PLHEDF
Trigger: GAAATCTTCATGAAGAGGCAACATCTCTAAGTGCCC...ATACAATTCTTGGTTCAGTGGGAAACAGAACCCTAAAACATCCATTTGATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp CTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATGAAATAAAGTGTTGGACCAGCACCTaGAATCAAATGGATGTTTTA +
Preference number: 5 (lower is better)
Translates to: LTHLTSLVIKYSRKDEIKCWTST*NQMDVL
Trigger: TAAAACATCCATTTGATTCAAGGTGCTGGTCCAACA...CTTTATTTCATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS-3UTR CAA 90 bp CTGACCCATCTTACTTCACTGGTAATCAAGTACAGTCGAAAGGATGAAATAAAGAGTTTAAAAACTCTGTaGGACCAGCACCTTGAATCA +
Preference number: 5 (lower is better)
Translates to: LTHLTSLVIKYSRKDEIKSLKTL*DQHLES
Trigger: TGATTCAAGGTGCTGGTCCAACAGAGTTTTTAAACT...CTTTATTTCATCCTTTCGACTGTACTTGATTACCAGTGAAGTAAGATGGGTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS GCA 72 bp TGGCCGCGGCGTCCCAGAGCTGCGCGTCACCCCCACTaGGCCCAGCGCCGAGGGCGGCCGGAAAACCGCGCC +
Preference number: 6 (lower is better)
Translates to: WPRRPRAARHPH*AQRRGRPENRA
Trigger: GGCGCGGTTTTCCGGCCGCCCTCGGCGCTGGGCGCAGTGGGGGTGACGCGCAGCTCTGGGACGCCGCGGCCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS CCA 72 bp GCGCGTAGCCGCGGCGGCGCCACTCCGCGCGTTCCATaGGCGGAGGCACCGGGCGGCGCAGATAGGCGGTCC +
Preference number: 6 (lower is better)
Translates to: ARSRGGATPRVP*AEAPGGADRRS
Trigger: GGACCGCCTATCTGCGCCGCCCGGTGCCTCCGCCCATGGAACGCGCGGAGTGGCGCCGCCGCGGCTACGCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS GCA 72 bp GGCGCGGCAGCGGGGCGGCCGACGCGCGGAAGTCTGTaGCGTAGAAGAGCAGCGCGCGCGTCCGCGAGTCCC +
Preference number: 6 (lower is better)
Translates to: GAAAGRPTRGSL*RRRAARASASP
Trigger: GGGACTCGCGGACGCGCGCGCTGCTCTTCTACGGCACAGACTTCCGCGCGTCGGCCGCCCCGCTGCCGCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CCA 72 bp TTGAGGGGCGACTCCTCGTGGAGGAGCGCCCAGCTCTaGTGCGCCAGGCGCGGCAGCGGGGCGGCCGACGCG +
Preference number: 6 (lower is better)
Translates to: LRGDSSWRSAQL*CARRGSGAADA
Trigger: CGCGTCGGCCGCCCCGCTGCCGCGCCTGGCGCACCAGAGCTGGGCGCTCCTCCACGAGGAGTCGCCCCTCAA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS TCA 72 bp CACGTAGCGGTCCCGGTCCGCTGGCACGTCGCAGTGTaGCTGCAGATAGAGCAGCGGCGCGTAGCCGCGGCG +
Preference number: 6 (lower is better)
Translates to: HVAVPVRWHVAV*LQIEQRRVAAA
Trigger: CGCCGCGGCTACGCGCCGCTGCTCTATCTGCAGTCACACTGCGACGTGCCAGCGGACCGGGACCGCTACGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CCA 72 bp TGGCTCAGCAAGAAGTTGTTGAGGGGCGACTCCTCGTaGAGGAGCGCCCAGCTCTGGTGCGCCAGGCGCGGC +
Preference number: 6 (lower is better)
Translates to: WLSKKLLRGDSS*RSAQLWCARRG
Trigger: GCCGCGCCTGGCGCACCAGAGCTGGGCGCTCCTCCACGAGGAGTCGCCCCTCAACAACTTCTTGCTGAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CCA 72 bp GGCACTGGGCAGTCCATGTGTGAGGGCTGGGCAATGTaGGGCTCAAAGACGGGGCTGTCCCCGGGAGAGGCC +
Preference number: 6 (lower is better)
Translates to: GTGQSMCEGWAM*GSKTGLSPGEA
Trigger: GGCCTCTCCCGGGGACAGCCCCGTCTTTGAGCCCCACATTGCCCAGCCCTCACACATGGACTGCCCAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
ENST00000489264.2
CDS TCA 72 bp GGCATTTCCCGTAGGAGTCTACCGGGATGTGGCGCATaGGCTCGCGCACGTAGCGGTCCCGGTCCGCTGGCA +
Preference number: 6 (lower is better)
Translates to: GISRRSLPGCGA*ARARSGPGPLA
Trigger: TGCCAGCGGACCGGGACCGCTACGTGCGCGAGCTCATGCGCCACATCCCGGTAGACTCCTACGGGAAATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS CCA 72 bp CGCGCACACTCGATGCGCTCCGAGTCTCCCGGGAAGTaGGGGAATAGCCCTGGGCTCCACCACAGCAGTACC +
Preference number: 6 (lower is better)
Translates to: RAHSMRSESPGK*GNSPGLHHSST
Trigger: GGTACTGCTGTGGTGGAGCCCAGGGCTATTCCCCCACTTCCCGGGAGACTCGGAGCGCATCGAGTGTGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372841.8
ENST00000394790.2
CDS CCA 72 bp GTGGAGGTAAGATTGAAGAGGCGGATGCCCGGGCCGTaGCTCAGCAAGAAGTTGTTGAGGGGCGACTCCTCG +
Preference number: 6 (lower is better)
Translates to: VEVRLKRRMPGP*LSKKLLRGDSS
Trigger: CGAGGAGTCGCCCCTCAACAACTTCTTGCTGAGCCACGGCCCGGGCATCCGCCTCTTCAATCTTACCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CCA 72 bp GAGAACCGCGGTACACGGGCACAGCGCCCAGGTGCATaGGACGCCACAGTTTTTCTGTCATGTAGTCGTTAC +
Preference number: 6 (lower is better)
Translates to: ENRGTRAQRPGA*DATVFLSCSRY
Trigger: GTAACGACTACATGACAGAAAAACTGTGGCGTCCCATGCACCTGGGCGCTGTGCCCGTGTACCGCGGTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CCA 72 bp CCCCACTCCCGATGCTTCAGACTATCCAGAAGAAATTaGTTGGTGATGCCCCCAGGTTGCTTGTATGCCAGG +
Preference number: 6 (lower is better)
Translates to: PHSRCFRLSRRN*LVMPPGCLYAR
Trigger: CCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGTCTGAAGCATCGGGAGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CAA 72 bp CACTCTTACCTGTCATTCTCAGGAATCTCTTCCACATaGCCAAAGCCAGGTGTGGGCACTGGGCAGTCCATG +
Preference number: 6 (lower is better)
Translates to: HSYLSFSGISST*PKPGVGTGQSM
Trigger: CATGGACTGCCCAGTGCCCACACCTGGCTTTGGCAATGTGGAAGAGATTCCTGAGAATGACAGGTAAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465695.1
CDS CAA 72 bp GAGAGCTTCCCCCTGGTCCAGACCTTGCCAATAATCTaGCAGCCACATCTCTTTCCAACTGTCATTCTCAGG +
Preference number: 6 (lower is better)
Translates to: ESFPLVQTLPII*QPHLFPTVILR
Trigger: CCTGAGAATGACAGTTGGAAAGAGATGTGGCTGCAAGATTATTGGCAAGGTCTGGACCAGGGGGAAGCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372841.8
CDS TCA 72 bp CCAGCTTCTGAGGAGACTCAAAATCATCAATCAGGATaGCGGAGTGATTGTTCGGCATCCAGTCCCTCACAG +
Preference number: 6 (lower is better)
Translates to: PASEETQNHQSG*RSDCSASSPSQ
Trigger: CTGTGAGGGACTGGATGCCGAACAATCACTCCGTCATCCTGATTGATGATTTTGAGTCTCCTCAGAAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CAA 72 bp CACTCCCGATGCTTCAGACTATCCAGAAGAAATTGGTaGGTGATGCCCCCAGGTTGCTTGTATGCCAGGTAT +
Preference number: 6 (lower is better)
Translates to: HSRCFRLSRRNW*VMPPGCLYARY
Trigger: ATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGTCTGAAGCATCGGGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CAA 90 bp ATTGTTGTGGATCATGGCAGTGAGAGCTTCCCCCTGGTCCAGACCTaGCCAATAATCTTGCAGCCACATCTCTTTCCAACTGTCATTCTC +
Preference number: 6 (lower is better)
Translates to: IVVDHGSESFPLVQT*PIILQPHLFPTVIL
Trigger: GAGAATGACAGTTGGAAAGAGATGTGGCTGCAAGATTATTGGCAAGGTCTGGACCAGGGGGAAGCTCTCACTGCCATGATCCACAACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372841.8
CDS TCA 72 bp CCCGATGCTTCAGACTATCCAGAAGAAATTGGTTGGTaGTGCCCCCAGGTTGCTTGTATGCCAGGTATTTCA +
Preference number: 6 (lower is better)
Translates to: PDASDYPEEIGW*CPQVACMPGIS
Trigger: TGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGTCTGAAGCATCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CAA 90 bp TTCACTCCCCACTCCCGATGCTTCAGACTATCCAGAAGAAATTGGTaGGTGATGCCCCCAGGTTGCTTGTATGCCAGGTATTTCATATAC +
Preference number: 6 (lower is better)
Translates to: FTPHSRCFRLSRRNW*VMPPGCLYARYFIY
Trigger: GTATATGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGTCTGAAGCATCGGGAGTGGGGAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CAA 90 bp ATCATTCACTCCCCACTCCCGATGCTTCAGACTATCCAGAAGAAATaGGTTGGTGATGCCCCCAGGTTGCTTGTATGCCAGGTATTTCAT +
Preference number: 6 (lower is better)
Translates to: IIHSPLPMLQTIQKK*VGDAPRLLVCQVFH
Trigger: ATGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGTCTGAAGCATCGGGAGTGGGGAGTGAATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS GCA 72 bp TTAGGCAGCAAAGGATCATTCACTCCCCACTCCCGATaGTTCAGACTATCCAGAAGAAATTGGTTGGTGATG +
Preference number: 6 (lower is better)
Translates to: LGSKGSFTPHSR*FRLSRRNWLVM
Trigger: CATCACCAACCAATTTCTTCTGGATAGTCTGAAGCATCGGGAGTGGGGAGTGAATGATCCTTTGCTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CCA 72 bp ATCAGGACAAAACTGCCAGCAGCATCTGTTAATAAATaGCCTTCTGCTGCCATCCACTGTCCAAGTCGGTTT +
Preference number: 6 (lower is better)
Translates to: IRTKLPAASVNK*PSAAIHCPSRF
Trigger: AAACCGACTTGGACAGTGGATGGCAGCAGAAGGCCATTTATTAACAGATGCTGCTGGCAGTTTTGTCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465695.1
CDS GCA 72 bp GGTTGGATTATGGAACTGCAGCATAGTTATGAGTCCTaGCTTTTTCCGAGTGGGGCCAAAGAAATCTTAAGC +
Preference number: 6 (lower is better)
Translates to: GWIMELQHSYES*LFPSGAKEILS
Trigger: GCTTAAGATTTCTTTGGCCCCACTCGGAAAAAGGCAGGACTCATAACTATGCTGCAGTTCCATAATCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394790.2
CDS TCA 72 bp TGCTACTTAATTGCCCACAGTAAGCAAGTAAGTAAATaGTTTGATAGCTGCAGGGGACCCCAGCACTCTTAC +
Preference number: 6 (lower is better)
Translates to: CYLIAHSKQVSK*FDSCRGPQHSY
Trigger: GTAAGAGTGCTGGGGTCCCCTGCAGCTATCAAATCATTTACTTACTTGCTTACTGTGGGCAATTAAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465695.1
CDS GCA 72 bp CTATCCAGAAGAAATTGGTTGGTGATGCCCCCAGGTTaGTTGTATGCCAGGTATTTCATATACTCCTCATCA +
Preference number: 6 (lower is better)
Translates to: LSRRNWLVMPPG*LYARYFIYSSS
Trigger: TGATGAGGAGTATATGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CAA 72 bp TCCAGAAGAAATTGGTTGGTGATGCCCCCAGGTTGCTaGTATGCCAGGTATTTCATATACTCCTCATCATTC +
Preference number: 6 (lower is better)
Translates to: SRRNWLVMPPGC*YARYFIYSSSF
Trigger: GAATGATGAGGAGTATATGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CAA 72 bp ACTATCCAGAAGAAATTGGTTGGTGATGCCCCCAGGTaGCTTGTATGCCAGGTATTTCATATACTCCTCATC +
Preference number: 6 (lower is better)
Translates to: TIQKKLVGDAPR*LVCQVFHILLI
Trigger: GATGAGGAGTATATGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CAA 90 bp TTCAGACTATCCAGAAGAAATTGGTTGGTGATGCCCCCAGGTTGCTaGTATGCCAGGTATTTCATATACTCCTCATCATTCTTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: FRLSRRNWLVMPPGC*YARYFIYSSSFLSR
Trigger: TCTGGACAAGAATGATGAGGAGTATATGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CAA 90 bp ATGCTTCAGACTATCCAGAAGAAATTGGTTGGTGATGCCCCCAGGTaGCTTGTATGCCAGGTATTTCATATACTCCTCATCATTCTTGTC +
Preference number: 6 (lower is better)
Translates to: MLQTIQKKLVGDAPR*LVCQVFHILLIILV
Trigger: GACAAGAATGATGAGGAGTATATGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGTCTGAAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS TCA 72 bp TTCTTGTCCAGAAAGTCAATAAACTCTGCCAGCTTCTaGGGAGACTCAAAATCATCAATCAGGATGACGGAG +
Preference number: 6 (lower is better)
Translates to: FLSRKSINSASF*GDSKSSIRMTE
Trigger: CTCCGTCATCCTGATTGATGATTTTGAGTCTCCTCAGAAGCTGGCAGAGTTTATTGACTTTCTGGACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS GCA 72 bp AAGAAATTGGTTGGTGATGCCCCCAGGTTGCTTGTATaGCAGGTATTTCATATACTCCTCATCATTCTTGTC +
Preference number: 6 (lower is better)
Translates to: KKLVGDAPRLLV*QVFHILLIILV
Trigger: GACAAGAATGATGAGGAGTATATGAAATACCTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372841.8
ENST00000394790.2
ENST00000465695.1
CDS CCA 72 bp TCTATAGGGAAAGTGAAGCTTTCGGTAAGTATCATGTaGCTATTCCTGGTTCTACTTTCCCTTGTGGAAATG +
Preference number: 6 (lower is better)
Translates to: SIGKVKLSVSIM*LFLVLLSLVEM
Trigger: CATTTCCACAAGGGAAAGTAGAACCAGGAATAGCCACATGATACTTACCGAAAGCTTCACTTTCCCTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489264.2
CDS CCA 72 bp GTATCATGTGGCTATTCCTGGTTCTACTTTCCCTTGTaGAAATGTAATACCTGGTTTACACTGCTCTTTTGT +
Preference number: 6 (lower is better)
Translates to: VSCGYSWFYFPL*KCNTWFTLLFC
Trigger: ACAAAAGAGCAGTGTAAACCAGGTATTACATTTCCACAAGGGAAAGTAGAACCAGGAATAGCCACATGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489264.2
CDS CAA 72 bp CATTTCCACTCTATAAAAGGTGCTCAAATAGCTGAGTaGATTTTTAGTGCAGTGCAAACTCCTGAACCTGGT +
Preference number: 6 (lower is better)
Translates to: HFHSIKGAQIAE*IFSAVQTPEPG
Trigger: ACCAGGTTCAGGAGTTTGCACTGCACTAAAAATCAACTCAGCTATTTGAGCACCTTTTATAGAGTGGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465695.1
CDS TCA 72 bp ATTCAGAAACAACTGCCCACTTTATACGTAAAAGTATaGAAGGAATGCCAATGTGAGCCCATGTCATTAGGA +
Preference number: 6 (lower is better)
Translates to: IQKQLPTLYVKV*KECQCEPMSLG
Trigger: TCCTAATGACATGGGCTCACATTGGCATTCCTTTCATACTTTTACGTATAAAGTGGGCAGTTGTTTCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489264.2
CDS CCA 72 bp GCCCTGTACTCTGGTTCAATCTTTTTGAACCACTACTaGAAACATTGTTCACATAAGCTGATTTTCATACGT +
Preference number: 6 (lower is better)
Translates to: ALYSGSIFLNHY*KHCSHKLIFIR
Trigger: ACGTATGAAAATCAGCTTATGTGAACAATGTTTCCAGTAGTGGTTCAAAAAGATTGAACCAGAGTACAGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465695.1
CDS GCA 72 bp ACTTTCCCTTGTGGAAATGTAATACCTGGTTTACACTaGTCTTTTGTGAGTACGTATATGGTGATAGGAATA +
Preference number: 6 (lower is better)
Translates to: TFPCGNVIPGLH*SFVSTYMVIGI
Trigger: TATTCCTATCACCATATACGTACTCACAAAAGAGCAGTGTAAACCAGGTATTACATTTCCACAAGGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489264.2
CDS CAA 72 bp CCCATGTCATTAGGAGAGGTAAGGATAATCTACACCTaGCTTAACCATCACTTAACCTTTTTATTGCACATA +
Preference number: 6 (lower is better)
Translates to: PMSLGEVRIIYT*LNHHLTFLLHI
Trigger: TATGTGCAATAAAAAGGTTAAGTGATGGTTAAGCAAGGTGTAGATTATCCTTACCTCTCCTAATGACATGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489264.2
CDS CAA 90 bp CAATGTGAGCCCATGTCATTAGGAGAGGTAAGGATAATCTACACCTaGCTTAACCATCACTTAACCTTTTTATTGCACATAATGAAATTT +
Preference number: 6 (lower is better)
Translates to: QCEPMSLGEVRIIYT*LNHHLTFLLHIMKF
Trigger: AAATTTCATTATGTGCAATAAAAAGGTTAAGTGATGGTTAAGCAAGGTGTAGATTATCCTTACCTCTCCTAATGACATGGGCTCACATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489264.2