RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FSTL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163430

Ensembl transcript IDs: ENST00000295633.8, ENST00000424703.6, ENST00000464690.5, ENST00000467994.1, ENST00000468098.1, ENST00000469005.1, ENST00000472536.5, ENST00000480823.1, ENST00000485968.5, ENST00000488318.1

Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGTGGATGCTGGAGGTCTGTCATGCTGACGGCAATGGAAAGAGGCTaGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTC +
Preference number: 1 (lower is better)
Translates to: RGCWRSVMLTAMERG*KQRAFLSVELPKPL
Trigger: GAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTCAGCATGACAGACCTCCAGCATCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR TCA 90 bp GTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTaGCGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCG +
Preference number: 1 (lower is better)
Translates to: VIGTKRCVDAGGLSC*RQWKEAGSRERSSP
Trigger: CGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR CCA 90 bp GGCCAACTCACCCTCCTAGTTAGTCGAATGAGCATATTGGTAGGCTaGGATATCCTAAGCCCTGCTTGGCTGCCCTTGTCGCCATCCTTG +
Preference number: 1 (lower is better)
Translates to: GQLTLLVSRMSILVG*DILSPAWLPLSPSL
Trigger: CAAGGATGGCGACAAGGGCAGCCAAGCAGGGCTTAGGATATCCCAGCCTACCAATATGCTCATTCGACTAACTAGGAGGGTGAGTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR GCA 90 bp GGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATaGTGGAGGTCTGTCATGCTGACGGCAATGGAAAGAGGCTGGAAG +
Preference number: 1 (lower is better)
Translates to: GYVSRGSYWDQEMRG*WRSVMLTAMERGWK
Trigger: CTTCCAGCCTCTTTCCATTGCCGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR CCA 90 bp GGCGACTGTAGCAGACACTTGTGTATACTGAACTCAGCGCTGAAGTaGAGAAGATGCTGGGATCCAGACACTGGTCTGTGCCTCCTCATT +
Preference number: 1 (lower is better)
Translates to: GDCSRHLCILNSALK*RRCWDPDTGLCLLI
Trigger: AATGAGGAGGCACAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAGTGTCTGCTACAGTCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480823.1
3UTR GCA 90 bp TCCCATAGTGTCCAAGGGCTGGTAAAACCTTTGATTAAGGCGTGCTaGTGTGAGTTCTCCAAGGCACTTGGACAGGGAGCTGCATTTCAG +
Preference number: 1 (lower is better)
Translates to: SHSVQGLVKPLIKAC*CEFSKALGQGAAFQ
Trigger: CTGAAATGCAGCTCCCTGTCCAAGTGCCTTGGAGAACTCACAGCAGCACGCCTTAATCAAAGGTTTTACCAGCCCTTGGACACTATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR GCA 90 bp TCCTCCCATAGTGTCCAAGGGCTGGTAAAACCTTTGATTAAGGCGTaGTGCTGTGAGTTCTCCAAGGCACTTGGACAGGGAGCTGCATTT +
Preference number: 1 (lower is better)
Translates to: SSHSVQGLVKPLIKA*CCEFSKALGQGAAF
Trigger: AAATGCAGCTCCCTGTCCAAGTGCCTTGGAGAACTCACAGCAGCACGCCTTAATCAAAGGTTTTACCAGCCCTTGGACACTATGGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 90 bp TATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTaGAGGTCTGTCATGCTGACGGCAATGGAAAGAGGCTGGAAGCAG +
Preference number: 1 (lower is better)
Translates to: YVSRGSYWDQEMRGC*RSVMLTAMERGWKQ
Trigger: CTGCTTCCAGCCTCTTTCCATTGCCGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR CCA 90 bp AGTCGAATGAGCATATTGGTAGGCTGGGATATCCTAAGCCCTGCTTaGCTGCCCTTGTCGCCATCCTTGGGAATACTGATTTGCCTCAAC +
Preference number: 1 (lower is better)
Translates to: SRMSILVGWDILSPA*LPLSPSLGILICLN
Trigger: GTTGAGGCAAATCAGTATTCCCAAGGATGGCGACAAGGGCAGCCAAGCAGGGCTTAGGATATCCCAGCCTACCAATATGCTCATTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR TCA 90 bp CACGTGGGCTTGTTAGCAGGCAGAGGAACCCTGCTTTCCAAAAACTaGTATAGTCCAGAGTCACGGCATGTGGGAATGTTTCCATGGACA +
Preference number: 1 (lower is better)
Translates to: HVGLLAGRGTLLSKN*YSPESRHVGMFPWT
Trigger: TGTCCATGGAAACATTCCCACATGCCGTGACTCTGGACTATATCAGTTTTTGGAAAGCAGGGTTCCTCTGCCTGCTAACAAGCCCACGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR GCA 90 bp AGCAGACACTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGATaGTGGGATCCAGACACTGGTCTGTGCCTCCTCATTAGATCTCTT +
Preference number: 1 (lower is better)
Translates to: SRHLCILNSALKWRR*WDPDTGLCLLIRSL
Trigger: AAGAGATCTAATGAGGAGGCACAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAGTGTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480823.1
3UTR CCA 90 bp TTATGGAAGACTCCCCAGACTAGGCTATTTAGCAGCTTCCATGAATaGTCCTCAGATCATGTGATTCTACGGCATAGACGACAGCTGCCC +
Preference number: 1 (lower is better)
Translates to: LWKTPQTRLFSSFHE*SSDHVILRHRRQLP
Trigger: GGGCAGCTGTCGTCTATGCCGTAGAATCACATGATCTGAGGACCATTCATGGAAGCTGCTAAATAGCCTAGTCTGGGGAGTCTTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 90 bp AGACACTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTaGGATCCAGACACTGGTCTGTGCCTCCTCATTAGATCTCTTTGG +
Preference number: 1 (lower is better)
Translates to: RHLCILNSALKWRRC*DPDTGLCLLIRSLW
Trigger: CCAAAGAGATCTAATGAGGAGGCACAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480823.1
3UTR GCA 90 bp CTGGCAATGATTCCATGTTCCCTGTACTACCTTCCCATGTTTATTTaGCTTCTCACAGGCTACTGCAGTCAGCCTCACTGGATGCCATTT +
Preference number: 1 (lower is better)
Translates to: LAMIPCSLYYLPMFI*LLTGYCSQPHWMPF
Trigger: AAATGGCATCCAGTGAGGCTGACTGCAGTAGCCTGTGAGAAGGCAAATAAACATGGGAAGGTAGTACAGGGAACATGGAATCATTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR GCA 90 bp GTGATTCTACGGCATAGACGACAGCTGCCCTATTTACACAGAAGCTaGAGAACTCAAGAGGAATGTGGATTTGCTCTTGGGAGTTCAATG +
Preference number: 1 (lower is better)
Translates to: VILRHRRQLPYLHRS*RTQEECGFALGSSM
Trigger: CATTGAACTCCCAAGAGCAAATCCACATTCCTCTTGAGTTCTGCAGCTTCTGTGTAAATAGGGCAGCTGTCGTCTATGCCGTAGAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 90 bp CCCATGTTTATTTGCCTTCTCACAGGCTACTGCAGTCAGCCTCACTaGATGCCATTTAGTCTCCTAAATCATATGGGGGATTTACGAGTC +
Preference number: 1 (lower is better)
Translates to: PMFICLLTGYCSQPH*MPFSLLNHMGDLRV
Trigger: GACTCGTAAATCCCCCATATGATTTAGGAGACTAAATGGCATCCAGTGAGGCTGACTGCAGTAGCCTGTGAGAAGGCAAATAAACATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR TCA 90 bp AAACTCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTaGTGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTAC +
Preference number: 1 (lower is better)
Translates to: KLKRGSDLGLFLFQS*CSFLTSLQPQSTIY
Trigger: GTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR TCA 90 bp AGACTAGGCTATTTAGCAGCTTCCATGAATGGTCCTCAGATCATGTaGTTCTACGGCATAGACGACAGCTGCCCTATTTACACAGAAGCT +
Preference number: 1 (lower is better)
Translates to: RLGYLAASMNGPQIM*FYGIDDSCPIYTEA
Trigger: AGCTTCTGTGTAAATAGGGCAGCTGTCGTCTATGCCGTAGAATCACATGATCTGAGGACCATTCATGGAAGCTGCTAAATAGCCTAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR GCA 90 bp TCCCTGTACTACCTTCCCATGTTTATTTGCCTTCTCACAGGCTACTaGAGTCAGCCTCACTGGATGCCATTTAGTCTCCTAAATCATATG +
Preference number: 1 (lower is better)
Translates to: SLYYLPMFICLLTGY*SQPHWMPFSLLNHM
Trigger: CATATGATTTAGGAGACTAAATGGCATCCAGTGAGGCTGACTGCAGTAGCCTGTGAGAAGGCAAATAAACATGGGAAGGTAGTACAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 90 bp TGCAGCCTGCTGACAGATGCAGTAAACTCAAAAGAGGTTCAGATTTaGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTTACTAGCC +
Preference number: 1 (lower is better)
Translates to: CSLLTDAVNSKEVQI*VCSSFNRDAVSLLA
Trigger: GGCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTTTACTGCATCTGTCAGCAGGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR CCA 90 bp GAACCCTGCTTTCCAAAAACTGATATAGTCCAGAGTCACGGCATGTaGGAATGTTTCCATGGACACTGGATCTTAACAGATGCTATAGTG +
Preference number: 1 (lower is better)
Translates to: EPCFPKTDIVQSHGM*ECFHGHWILTDAIV
Trigger: CACTATAGCATCTGTTAAGATCCAGTGTCCATGGAAACATTCCCACATGCCGTGACTCTGGACTATATCAGTTTTTGGAAAGCAGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR TCA 90 bp GGGTTAATAATCACAGAAGTCGAAAGACACAGGACTAACTGTAAATaGCTGACCTCCCCAAGTCACAGTTTTAGGATTAAATCTCCATTT +
Preference number: 1 (lower is better)
Translates to: GLIITEVERHRTNCK*LTSPSHSFRIKSPF
Trigger: AAATGGAGATTTAATCCTAAAACTGTGACTTGGGGAGGTCAGTCATTTACAGTTAGTCCTGTGTCTTTCGACTTCTGTGATTATTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR TCA 90 bp GAGATCTTATGTCAAGGATTTAATCTTTGGTATTCCAAATGCATCTaGAACAGGGTAGTGAGTGGGGTTAATAATCACAGAAGTCGAAAG +
Preference number: 1 (lower is better)
Translates to: EILCQGFNLWYSKCI*NRVVSGVNNHRSRK
Trigger: CTTTCGACTTCTGTGATTATTAACCCCACTCACTACCCTGTTTCAGATGCATTTGGAATACCAAAGATTAAATCCTTGACATAAGATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR GCA 90 bp TGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACTCTCTGGCATCGTGTaGACTCCCTGCAGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: WKQRAFLSVELPKPLLRGLSGIV*TPCSLL
Trigger: CAGCAGGCTGCAGGGAGTGCACACGATGCCAGAGAG...TCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR CCA 90 bp AGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTGCTAACTCAGCGCTGAAGTaGAGAAGATGCTGGGATCCA +
Preference number: 2 (lower is better)
Translates to: RAFLSVELPKPLLRGHPANSALK*RRCWDP
Trigger: TGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTT...AGCAGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR GCA 90 bp AGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGCTCTCTGGCATCGTGTaGACTCCCTGCAGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: RGSYWDQEMRGCWRSVMLLSGIV*TPCSLL
Trigger: CAGCAGGCTGCAGGGAGTGCACACGATGCCAGAGAG...CAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR-3UTR GCA 90 bp GACACCCTGCTAAGTTCTCTCTGGCATCGTGTGCACTCCCTGCAGCCTGCTGACCTGAAGTGGAGAAGATaGTGGGATCCAGACACTGGT +
Preference number: 2 (lower is better)
Translates to: DTLLSSLWHRVHSLQPADLKWRR*WDPDTG
Trigger: ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAG...GTCAGCAGGCTGCAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAGGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR GCA 90 bp TCCGGGGACACCCTGCTAAGTTCTCTCTGGCATCGTGTGCACTCCCTGCAGCCTCCAGACACTGGTCTGTaGCTCCTCATTAGATCTCTT +
Preference number: 2 (lower is better)
Translates to: SGDTLLSSLWHRVHSLQPPDTGL*LLIRSL
Trigger: AAGAGATCTAATGAGGAGGCACAGACCAGTGTCTGG...AGGCTGCAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAGGGTGTCCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480823.1
3UTR-3UTR TCA 90 bp AGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTGCTATAAGCAAATACTGGTaGTTTGGCGACTGTAGCAGA +
Preference number: 2 (lower is better)
Translates to: RAFLSVELPKPLLRGHPAISKYW*FGDCSR
Trigger: TCTGCTACAGTCGCCAAATCACCAGTATTTGCTTAT...AGCAGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR CCA 90 bp GCGTGGATGCTGGAGGTCTGTCATGCTGACGGCAATGGAAAGAGGCTGGAAGCAAAGTGGAGAAGATGCTaGGATCCAGACACTGGTCTG +
Preference number: 2 (lower is better)
Translates to: AWMLEVCHADGNGKRLEAKWRRC*DPDTGL
Trigger: CAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTT...TGCTTCCAGCCTCTTTCCATTGCCGTCAGCATGACAGACCTCCAGCATCCACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR CCA 90 bp AAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTAACTCAGCGCTGAAGTaGAGAAGATGCTGGGATCCA +
Preference number: 2 (lower is better)
Translates to: KRLEAESVPLRGASQTSPNSALK*RRCWDP
Trigger: TGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTT...AGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR CAA 90 bp AAGAGACAGGGCCAACTCACCCTCCTAGTTAGTCGAATGAGCATATaGGTAGGCTGGGATATCCTAAGCCCTGCTTGGCTGCCCTTGTCG +
Preference number: 2 (lower is better)
Translates to: KRQGQLTLLVSRMSI*VGWDILSPAWLPLS
Trigger: CGACAAGGGCAGCCAAGCAGGGCTTAGGATATCCCAGCCTACCAATATGCTCATTCGACTAACTAGGAGGGTGAGTTGGCCCTGTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CAA 90 bp GTACTCTTGCCCTCCTCCCATAGTGTCCAAGGGCTGGTAAAACCTTaGATTAAGGCGTGCTGCTGTGAGTTCTCCAAGGCACTTGGACAG +
Preference number: 2 (lower is better)
Translates to: VLLPSSHSVQGLVKP*IKACCCEFSKALGQ
Trigger: CTGTCCAAGTGCCTTGGAGAACTCACAGCAGCACGCCTTAATCAAAGGTTTTACCAGCCCTTGGACACTATGGGAGGAGGGCAAGAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CAA 90 bp CCTATGTCACACCATGCAACAGCCCCCAGCAGCAGTAGGCCAGAGTaGTTTTCATGTCCCATATCCCAGCTAGGATTATTCCAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: PMSHHATAPSSSRPE*FSCPISQLGLFQGS
Trigger: AGAGCCCTGGAATAATCCTAGCTGGGATATGGGACATGAAAACAACTCTGGCCTACTGCTGCTGGGGGCTGTTGCATGGTGTGACATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR TCA 90 bp GACACCCTGCTAAGTTCTCTCTGGCATCGTGTGCACTCCCTGCAGCCTGCTGACTTCCTCTTTCAATCGTaGTGCAGTTTCCTTACTAGC +
Preference number: 2 (lower is better)
Translates to: DTLLSSLWHRVHSLQPADFLFQS*CSFLTS
Trigger: GCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAA...GTCAGCAGGCTGCAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAGGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR GCA 90 bp ATGCTGACGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCAGCCTGCTGACAGATaGAGTAAACTCAAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: MLTAMERGWKQRAFLSVEQPADR*SKLKRG
Trigger: ACCTCTTTTGAGTTTACTGCATCTGTCAGCAGGCTG...CTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR GCA 90 bp AAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCAGCCTGCTGACAGATaGAGTAAACTCAAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: KRLEAESVPLRGASQTSPQPADR*SKLKRG
Trigger: ACCTCTTTTGAGTTTACTGCATCTGTCAGCAGGCTG...AGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR TCA 90 bp AGCCCCTGCACCAGGAAGAACCCCAAACTCCTTCCACCTATGAAGTGGTGGGACTTCCTCTTTCAATCGTaGTGCAGTTTCCTTACTAGC +
Preference number: 2 (lower is better)
Translates to: SPCTRKNPKLLPPMKWWDFLFQS*CSFLTS
Trigger: GCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAA...GTCCCACCACTTCATAGGTGGAAGGAGTTTGGGGTTCTTCCTGGTGCAGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR GCA 90 bp TCCTCTTTCAATCGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCACTGAAGTGGAGAAGATaGTGGGATCCAGACACTGGT +
Preference number: 2 (lower is better)
Translates to: SSFNRDAVSLLASSPRAPLKWRR*WDPDTG
Trigger: ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAG...TGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACGATTGAAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR GCA 90 bp TATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATCCAAGTCCTCTCTGGCATCGTGTaGACTCCCTGCAGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: YTSICIIWVYPPRNSIQVLSGIV*TPCSLL
Trigger: CAGCAGGCTGCAGGGAGTGCACACGATGCCAGAGAG...GACTTGGATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR CAA 90 bp AGCATATTGGTAGGCTGGGATATCCTAAGCCCTGCTTGGCTGCCCTaGTCGCCATCCTTGGGAATACTGATTTGCCTCAACTTCTCAGAA +
Preference number: 2 (lower is better)
Translates to: SILVGWDILSPAWLP*SPSLGILICLNFSE
Trigger: TTCTGAGAAGTTGAGGCAAATCAGTATTCCCAAGGATGGCGACAAGGGCAGCCAAGCAGGGCTTAGGATATCCCAGCCTACCAATATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR GCA 90 bp ACTAGCAGTATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGATCGTGTGCACTCCCTaGAGCCTGCTGACAGATGCA +
Preference number: 2 (lower is better)
Translates to: TSSMAMYLEAVIGTKRCVIVCTP*SLLTDA
Trigger: TGCATCTGTCAGCAGGCTGCAGGGAGTGCACACGAT...CACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCATACTGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR-3UTR CCA 90 bp GTCCCAGGAGAAACTCTTCAGTCCTTTTTAAGGCTCCTGAAACTCAAATCCACTGCACCCTTGCTCCTCTaGCAGATAGTGGACTGCTGG +
Preference number: 2 (lower is better)
Translates to: VPGETLQSFLRLLKLKSTAPLLL*QIVDCW
Trigger: CCAGCAGTCCACTATCTGCCAGAGGAGCAAGGGTGC...AGTGGATTTGAGTTTCAGGAGCCTTAAAAAGGACTGAAGAGTTTCTCCTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CAA 90 bp CCTGGCAATGATTCCATGTTCCCTGTACTACCTTCCCATGTTTATTaGCCTTCTCACAGGCTACTGCAGTCAGCCTCACTGGATGCCATT +
Preference number: 2 (lower is better)
Translates to: PGNDSMFPVLPSHVY*PSHRLLQSASLDAI
Trigger: AATGGCATCCAGTGAGGCTGACTGCAGTAGCCTGTGAGAAGGCAAATAAACATGGGAAGGTAGTACAGGGAACATGGAATCATTGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR CCA 90 bp CAGAAACTCCATCCAAGTCTGAGGGACACTGGGTTAACTAGCAGTATGGCTATGAAGTGGAGAAGATGCTaGGATCCAGACACTGGTCTG +
Preference number: 2 (lower is better)
Translates to: QKLHPSLRDTGLTSSMAMKWRRC*DPDTGL
Trigger: CAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTT...CATAGCCATACTGCTAGTTAACCCAGTGTCCCTCAGACTTGGATGGAGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR-3UTR TCA 90 bp CTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATGGAGGTCTGTCATGCTaGCGGCAATGGAAAGAGGCT +
Preference number: 2 (lower is better)
Translates to: LKVYKYLHHLGVPSQKLHGGLSC*RQWKEA
Trigger: AGCCTCTTTCCATTGCCGTCAGCATGACAGACCTCC...ATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR CAA 90 bp GCAAGCTTCAACAAGCCGTCATCAGACACTGAATCTGCTGGTACCTaGATCTTAGGCTTCCCAGCCTTCAGAACTGTGAGCAATACATTT +
Preference number: 2 (lower is better)
Translates to: ASFNKPSSDTESAGT*ILGFPAFRTVSNTF
Trigger: AAATGTATTGCTCACAGTTCTGAAGGCTGGGAAGCCTAAGATCAAGGTACCAGCAGATTCAGTGTCTGATGACGGCTTGTTGAAGCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR CCA 90 bp TCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATCCTGCTAAGTTCTCTCTaGCATCGTGTGCACTCCCTG +
Preference number: 2 (lower is better)
Translates to: SKYTSICIIWVYPPRNSILLSSL*HRVHSL
Trigger: CAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAG...GATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR-3UTR GCA 90 bp GAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGGGTCAAGAGATGCGTGGATaGTGGAGGTCTGTCATGCTG +
Preference number: 2 (lower is better)
Translates to: EVSQNLKVVVDKVPFKLGQEMRG*WRSVML
Trigger: CAGCATGACAGACCTCCAGCATCCACGCATCTCTTG...ACCCAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR CCA 90 bp CAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTAAGTGGAGAAGATGCTaGGATCCAGACACTGGTCTG +
Preference number: 2 (lower is better)
Translates to: QKRFRFGSVPLSIVMQFPKWRRC*DPDTGL
Trigger: CAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTT...AGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR TCA 90 bp AAACAAGGAGTTACCATTTTTCCTCTATCAGAGGCCAAAAAGTTCGAAGGCACAGGTCCTCAGATCATGTaGTTCTACGGCATAGACGAC +
Preference number: 2 (lower is better)
Translates to: KQGVTIFPLSEAKKFEGTGPQIM*FYGIDD
Trigger: GTCGTCTATGCCGTAGAATCACATGATCTGAGGACC...TGTGCCTTCGAACTTTTTGGCCTCTGATAGAGGAAAAATGGTAACTCCTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR TCA 90 bp ATGTTTATTTGCCTTCTCACAGGCTACTGCAGTCAGCCTCACTGGATGCCATTTCAGACCCACTATCCATaGTCCTTTCAAAGAAACTTG +
Preference number: 2 (lower is better)
Translates to: MFICLLTGYCSQPHWMPFQTHYP*SFQRNL
Trigger: CAAGTTTCTTTGAAAGGATCATGGATAGTGGGTCTG...AAATGGCATCCAGTGAGGCTGACTGCAGTAGCCTGTGAGAAGGCAAATAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CAA 90 bp TGCAGAACTCAAGAGGAATGTGGATTTGCTCTTGGGAGTTCAATGTaGCAGGGTAGAGTAGTCTTGGATGATAACCATGTTCTAAATGAC +
Preference number: 2 (lower is better)
Translates to: CRTQEECGFALGSSM*QGRVVLDDNHVLND
Trigger: GTCATTTAGAACATGGTTATCATCCAAGACTACTCTACCCTGCAACATTGAACTCCCAAGAGCAAATCCACATTCCTCTTGAGTTCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR TCA 90 bp CAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTATAAGCAAATACTGGTaGTTTGGCGACTGTAGCAGA +
Preference number: 2 (lower is better)
Translates to: QKRFRFGSVPLSIVMQFPISKYW*FGDCSR
Trigger: TCTGCTACAGTCGCCAAATCACCAGTATTTGCTTAT...AGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR GCA 90 bp TGGGAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGCTTCCCATGTTTATTTaGCTTCTCACAGGCTACTGC +
Preference number: 2 (lower is better)
Translates to: WEVSQNLKVVVDKVPFKLLPMFI*LLTGYC
Trigger: GCAGTAGCCTGTGAGAAGGCAAATAAACATGGGAAG...CAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CAA 90 bp ATCTTAGGCTTCCCAGCCTTCAGAACTGTGAGCAATACATTTCTGTaGCCTATAATTACCCAGTCTGAGGCATTTTGTTATAGCAACTTG +
Preference number: 2 (lower is better)
Translates to: ILGFPAFRTVSNTFL*PIITQSEAFCYSNL
Trigger: CAAGTTGCTATAACAAAATGCCTCAGACTGGGTAATTATAGGCAACAGAAATGTATTGCTCACAGTTCTGAAGGCTGGGAAGCCTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR GCA 90 bp AGACACTGTGGTTTCTTGCTTTTAACAAATTGGTGTACTCTTGCCCTCCTCCCAAAGTATACAAGTATCTaGATCATTTGGGTGTACCCT +
Preference number: 2 (lower is better)
Translates to: RHCGFLLLTNWCTLALLPKYTSI*IIWVYP
Trigger: AGGGTACACCCAAATGATGCAGATACTTGTATACTT...TGGGAGGAGGGCAAGAGTACACCAATTTGTTAAAAGCAAGAAACCACAGTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR GCA 90 bp GAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGGGTTTCACCATGTGGGGATaGATCAAAAAGGTGCATTCT +
Preference number: 2 (lower is better)
Translates to: EVSQNLKVVVDKVPFKLGFTMWG*IKKVHS
Trigger: AGAATGCACCTTTTTGATGCATCCCCACATGGTGAA...ACCCAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR CCA 90 bp ATGTTTATTTGCCTTCTCACAGGCTACTGCAGTCAGCCTCACTGGATGCCATTTAAGGAATTCTATTTTTaGCACAACAGTTTCTCACAG +
Preference number: 2 (lower is better)
Translates to: MFICLLTGYCSQPHWMPFKEFYF*HNSFSQ
Trigger: CTGTGAGAAACTGTTGTGCCAAAAATAGAATTCCTT...AAATGGCATCCAGTGAGGCTGACTGCAGTAGCCTGTGAGAAGGCAAATAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR CCA 90 bp TGGGAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGGTGGGAATGTTTCCATaGACACTGGATCTTAACAGA +
Preference number: 2 (lower is better)
Translates to: WEVSQNLKVVVDKVPFKLVGMFP*TLDLNR
Trigger: TCTGTTAAGATCCAGTGTCCATGGAAACATTCCCAC...CAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR CCA 90 bp GTCCCAGGAGAAACTCTTCAGTCCTTTTTAAGGCTCCTGAAACTCAAATCCACTAGTGAAGAGACACTGTaGTTTCTTGCTTTTAACAAA +
Preference number: 2 (lower is better)
Translates to: VPGETLQSFLRLLKLKSTSEETL*FLAFNK
Trigger: TTTGTTAAAAGCAAGAAACCACAGTGTCTCTTCACT...AGTGGATTTGAGTTTCAGGAGCCTTAAAAAGGACTGAAGAGTTTCTCCTGGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR TCA 90 bp TGGGAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGTCTGCTTTCTGCAAATaGGATCTTATGTCAAGGATT +
Preference number: 2 (lower is better)
Translates to: WEVSQNLKVVVDKVPFKLSAFCK*DLMSRI
Trigger: AATCCTTGACATAAGATCTCATTTGCAGAAAGCAGA...CAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 72 bp TGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTaGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTG +
Preference number: 3 (lower is better)
Translates to: WKEAGSRERSSP*SFPNLSSGDTL
Trigger: CAGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR CCA 72 bp TGGAGGTCTGTCATGCTGACGGCAATGGAAAGAGGCTaGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCC +
Preference number: 3 (lower is better)
Translates to: WRSVMLTAMERG*KQRAFLSVELP
Trigger: GGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTCAGCATGACAGACCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR CAA 90 bp AGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCGCAAATACTGGTGATTaGGCGACTGTAGCAGACACT +
Preference number: 3 (lower is better)
Translates to: SRERSSPWSFPNLSSGDTANTGD*ATVADT
Trigger: AGTGTCTGCTACAGTCGCCAAATCACCAGTATTTGC...GGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR TCA 72 bp ACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTaGCGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGT +
Preference number: 3 (lower is better)
Translates to: TKRCVDAGGLSC*RQWKEAGSRER
Trigger: ACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR-3UTR CAA 90 bp ATTAAGGCGTGCTGCTGTGAGTTCTCCAAGGCACTTGGACAGGGAGCTGCATTTCCTGCTTGGCTGCCCTaGTCGCCATCCTTGGGAATA +
Preference number: 3 (lower is better)
Translates to: IKACCCEFSKALGQGAAFPAWLP*SPSLGI
Trigger: TATTCCCAAGGATGGCGACAAGGGCAGCCAAGCAGG...AAATGCAGCTCCCTGTCCAAGTGCCTTGGAGAACTCACAGCAGCACGCCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 72 bp AGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTaGAGGTCTGTCATGCTGACGGCAATGGAAAGAGGC +
Preference number: 3 (lower is better)
Translates to: RGSYWDQEMRGC*RSVMLTAMERG
Trigger: GCCTCTTTCCATTGCCGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR-3UTR CAA 90 bp AGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCAAAAGAGGTTCAGATTaGGGTCTGTTCCTCTTTCAA +
Preference number: 3 (lower is better)
Translates to: SRERSSPWSFPNLSSGDTKRGSD*GLFLFQ
Trigger: TTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTT...GGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR GCA 72 bp GTCCAAGGGCTGGTAAAACCTTTGATTAAGGCGTGCTaGTGTGAGTTCTCCAAGGCACTTGGACAGGGAGCT +
Preference number: 3 (lower is better)
Translates to: VQGLVKPLIKAC*CEFSKALGQGA
Trigger: AGCTCCCTGTCCAAGTGCCTTGGAGAACTCACAGCAGCACGCCTTAATCAAAGGTTTTACCAGCCCTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 72 bp ACCCTCCTAGTTAGTCGAATGAGCATATTGGTAGGCTaGGATATCCTAAGCCCTGCTTGGCTGCCCTTGTCG +
Preference number: 3 (lower is better)
Translates to: TLLVSRMSILVG*DILSPAWLPLS
Trigger: CGACAAGGGCAGCCAAGCAGGGCTTAGGATATCCCAGCCTACCAATATGCTCATTCGACTAACTAGGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR CAA 90 bp GCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAAGACTGTAGCAGACACTaGTGTATACTGAACTCAGCG +
Preference number: 3 (lower is better)
Translates to: AMERGWKQRAFLSVELPKDCSRH*CILNSA
Trigger: CGCTGAGTTCAGTATACACAAGTGTCTGCTACAGTC...TTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR CAA 90 bp AATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCGCAAATACTGGTGATTaGGCGACTGTAGCAGACACT +
Preference number: 3 (lower is better)
Translates to: NGKRLEAESVPLRGASQTANTGD*ATVADT
Trigger: AGTGTCTGCTACAGTCGCCAAATCACCAGTATTTGC...GGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR-3UTR CAA 90 bp AGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGACGCAAATACTGGTGATTaGGCGACTGTAGCAGACACT +
Preference number: 3 (lower is better)
Translates to: RQLLGPRDAWMLEVCHADANTGD*ATVADT
Trigger: AGTGTCTGCTACAGTCGCCAAATCACCAGTATTTGC...GTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR-3UTR CAA 90 bp GACACCCTGCTAAGTTCTCTCTGGCATCGTGTGCACTCCCTGCAGCCTGCTGACAAAAGAGGTTCAGATTaGGGTCTGTTCCTCTTTCAA +
Preference number: 3 (lower is better)
Translates to: DTLLSSLWHRVHSLQPADKRGSD*GLFLFQ
Trigger: TTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTT...GTCAGCAGGCTGCAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAGGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR GCA 72 bp TCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATaGTGGAGGTCTGTCATGCTGACGGCAATGGAAAGA +
Preference number: 3 (lower is better)
Translates to: SRGSYWDQEMRG*WRSVMLTAMER
Trigger: TCTTTCCATTGCCGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR GCA 72 bp AATGAGCATATTGGTAGGCTGGGATATCCTAAGCCCTaGTTGGCTGCCCTTGTCGCCATCCTTGGGAATACT +
Preference number: 3 (lower is better)
Translates to: NEHIGRLGYPKP*LAALVAILGNT
Trigger: AGTATTCCCAAGGATGGCGACAAGGGCAGCCAAGCAGGGCTTAGGATATCCCAGCCTACCAATATGCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 72 bp AGCAGACACTTGTGTATACTGAACTCAGCGCTGAAGTaGAGAAGATGCTGGGATCCAGACACTGGTCTGTGC +
Preference number: 3 (lower is better)
Translates to: SRHLCILNSALK*RRCWDPDTGLC
Trigger: GCACAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAGTGTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR TCA 72 bp AGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTaGTGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: RGSDLGLFLFQS*CSFLTSLQPQS
Trigger: GCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR GCA 72 bp TTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGATaGTGGGATCCAGACACTGGTCTGTGCCTCCTCATT +
Preference number: 3 (lower is better)
Translates to: LCILNSALKWRR*WDPDTGLCLLI
Trigger: AATGAGGAGGCACAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480823.1
3UTR CCA 72 bp TGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTaGGATCCAGACACTGGTCTGTGCCTCCTCATTAGA +
Preference number: 3 (lower is better)
Translates to: CILNSALKWRRC*DPDTGLCLLIR
Trigger: TCTAATGAGGAGGCACAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480823.1
3UTR-3UTR CAA 90 bp CAGCCTGCTGACAGATGCAGTAAACTCAAAAGAGGTTCAGATTTGGGTCTGTTCGACTGTAGCAGACACTaGTGTATACTGAACTCAGCG +
Preference number: 3 (lower is better)
Translates to: QPADRCSKLKRGSDLGLFDCSRH*CILNSA
Trigger: CGCTGAGTTCAGTATACACAAGTGTCTGCTACAGTC...GAACAGACCCAAATCTGAACCTCTTTTGAGTTTACTGCATCTGTCAGCAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR TCA 72 bp TCACCATGTGGGGATGCATCAAAAAGGTGCATTCTTTaGAGCAGGCAAGCTTCAACAAGCCGTCATCAGACA +
Preference number: 3 (lower is better)
Translates to: SPCGDASKRCIL*SRQASTSRHQT
Trigger: TGTCTGATGACGGCTTGTTGAAGCTTGCCTGCTTCAAAGAATGCACCTTTTTGATGCATCCCCACATGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR GCA 72 bp TACCTTCCCATGTTTATTTGCCTTCTCACAGGCTACTaGAGTCAGCCTCACTGGATGCCATTTAGTCTCCTA +
Preference number: 3 (lower is better)
Translates to: YLPMFICLLTGY*SQPHWMPFSLL
Trigger: TAGGAGACTAAATGGCATCCAGTGAGGCTGACTGCAGTAGCCTGTGAGAAGGCAAATAAACATGGGAAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 72 bp ACTCCCCAGACTAGGCTATTTAGCAGCTTCCATGAATaGTCCTCAGATCATGTGATTCTACGGCATAGACGA +
Preference number: 3 (lower is better)
Translates to: TPQTRLFSSFHE*SSDHVILRHRR
Trigger: TCGTCTATGCCGTAGAATCACATGATCTGAGGACCATTCATGGAAGCTGCTAAATAGCCTAGTCTGGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 72 bp ATTTGCCTTCTCACAGGCTACTGCAGTCAGCCTCACTaGATGCCATTTAGTCTCCTAAATCATATGGGGGAT +
Preference number: 3 (lower is better)
Translates to: ICLLTGYCSQPH*MPFSLLNHMGD
Trigger: ATCCCCCATATGATTTAGGAGACTAAATGGCATCCAGTGAGGCTGACTGCAGTAGCCTGTGAGAAGGCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR TCA 72 bp CTCCATATCATAGCACGACCTGTAGGGTCATCAGGCTaGGATCAAATCTGGTCATCTTGTTTTTGGCCATCT +
Preference number: 3 (lower is better)
Translates to: LHIIARPVGSSG*DQIWSSCFWPS
Trigger: AGATGGCCAAAAACAAGATGACCAGATTTGATCTCAGCCTGATGACCCTACAGGTCGTGCTATGATATGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR TCA 72 bp TTGTTAGCAGGCAGAGGAACCCTGCTTTCCAAAAACTaGTATAGTCCAGAGTCACGGCATGTGGGAATGTTT +
Preference number: 3 (lower is better)
Translates to: LLAGRGTLLSKN*YSPESRHVGMF
Trigger: AAACATTCCCACATGCCGTGACTCTGGACTATATCAGTTTTTGGAAAGCAGGGTTCCTCTGCCTGCTAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR GCA 72 bp GCTCTTTTGGGAGGCAGAATTATTGTGGGTGGAGAGTaGATGATACATATGAAAATGGCAGGTTGGAAAGCG +
Preference number: 3 (lower is better)
Translates to: ALLGGRIIVGGE*MIHMKMAGWKA
Trigger: CGCTTTCCAACCTGCCATTTTCATATGTATCATGCACTCTCCACCCACAATAATTCTGCCTCCCAAAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR TCA 72 bp TATTTAGCAGCTTCCATGAATGGTCCTCAGATCATGTaGTTCTACGGCATAGACGACAGCTGCCCTATTTAC +
Preference number: 3 (lower is better)
Translates to: YLAASMNGPQIM*FYGIDDSCPIY
Trigger: GTAAATAGGGCAGCTGTCGTCTATGCCGTAGAATCACATGATCTGAGGACCATTCATGGAAGCTGCTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR TCA 72 bp AAAGCAATGGTATTGAGAGGTGAGGCTCTTGGGAGATaGTTAGGTCATCAAAGTTTAACCCTCATGAATGGG +
Preference number: 3 (lower is better)
Translates to: KAMVLRGEALGR*LGHQSLTLMNG
Trigger: CCCATTCATGAGGGTTAAACTTTGATGACCTAATCATCTCCCAAGAGCCTCACCTCTCAATACCATTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR TCA 72 bp ATGTCCCATATCCCAGCTAGGATTATTCCAGGGCTCTaGAGGCATCTGCTTAGATCTATCTATGCATTCATA +
Preference number: 3 (lower is better)
Translates to: MSHIPARIIPGL*RHLLRSIYAFI
Trigger: TATGAATGCATAGATAGATCTAAGCAGATGCCTTCAGAGCCCTGGAATAATCCTAGCTGGGATATGGGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 72 bp CTGACAGATGCAGTAAACTCAAAAGAGGTTCAGATTTaGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCC +
Preference number: 3 (lower is better)
Translates to: LTDAVNSKEVQI*VCSSFNRDAVS
Trigger: GGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTTTACTGCATCTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
3UTR CCA 72 bp TATAGTCCAGAGTCACGGCATGTGGGAATGTTTCCATaGACACTGGATCTTAACAGATGCTATAGTGTTTAC +
Preference number: 3 (lower is better)
Translates to: YSPESRHVGMFP*TLDLNRCYSVY
Trigger: GTAAACACTATAGCATCTGTTAAGATCCAGTGTCCATGGAAACATTCCCACATGCCGTGACTCTGGACTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR-3UTR CAA 90 bp GAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGGGTAATGTGGATTTGCTCTaGGGAGTTCAATGTTGCAGG +
Preference number: 3 (lower is better)
Translates to: EVSQNLKVVVDKVPFKLGNVDLL*GVQCCR
Trigger: CCTGCAACATTGAACTCCCAAGAGCAAATCCACATT...ACCCAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR TCA 72 bp CAGAAGTCGAAAGACACAGGACTAACTGTAAATGACTaGCCTCCCCAAGTCACAGTTTTAGGATTAAATCTC +
Preference number: 3 (lower is better)
Translates to: QKSKDTGLTVND*PPQVTVLGLNL
Trigger: GAGATTTAATCCTAAAACTGTGACTTGGGGAGGTCAGTCATTTACAGTTAGTCCTGTGTCTTTCGACTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR TCA 72 bp ATCACAGAAGTCGAAAGACACAGGACTAACTGTAAATaGCTGACCTCCCCAAGTCACAGTTTTAGGATTAAA +
Preference number: 3 (lower is better)
Translates to: ITEVERHRTNCK*LTSPSHSFRIK
Trigger: TTTAATCCTAAAACTGTGACTTGGGGAGGTCAGTCATTTACAGTTAGTCCTGTGTCTTTCGACTTCTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 72 bp GTTCGAAGGCACAATGTTTGCAAGAATGTAGGGAAATaGATATGCTCAGTTTATGTACTTTTGGCAGTCATG +
Preference number: 3 (lower is better)
Translates to: VRRHNVCKNVGK*ICSVYVLLAVM
Trigger: CATGACTGCCAAAAGTACATAAACTGAGCATATCCATTTCCCTACATTCTTGCAAACATTGTGCCTTCGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR GCA 72 bp AGGCACAATGTTTGCAAGAATGTAGGGAAATGGATATaGTCAGTTTATGTACTTTTGGCAGTCATGCATACT +
Preference number: 3 (lower is better)
Translates to: RHNVCKNVGKWI*SVYVLLAVMHT
Trigger: AGTATGCATGACTGCCAAAAGTACATAAACTGAGCATATCCATTTCCCTACATTCTTGCAAACATTGTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR GCA 72 bp TCTATCAGAGGCCAAAAAGTTCGAAGGCACAATGTTTaGAAGAATGTAGGGAAATGGATATGCTCAGTTTAT +
Preference number: 3 (lower is better)
Translates to: SIRGQKVRRHNV*KNVGKWICSVY
Trigger: ATAAACTGAGCATATCCATTTCCCTACATTCTTGCAAACATTGTGCCTTCGAACTTTTTGGCCTCTGATAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CCA 72 bp AGAAGAAGGAAAAATCACAGGAACCTATCTCCCCTCTaGACCAATGATCAGAACCACAGAATTTATAACTTA +
Preference number: 3 (lower is better)
Translates to: RRRKNHRNLSPL*TNDQNHRIYNL
Trigger: TAAGTTATAAATTCTGTGGTTCTGATCATTGGTCCAGAGGGGAGATAGGTTCCTGTGATTTTTCCTTCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp GAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACTGGTCCAGGTCTCCTaGGGGCGCGGGGCAGGACGG +
Preference number: 4 (lower is better)
Translates to: EAESVPLRGASQTSPPGTLVQVS*GRGAGR
Trigger: CCGTCCTGCCCCGCGCCCCCAGGAGACCTGGACCAG...TGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR GCA 90 bp CTCCTCCGGGGACACCCTGCTAAGTTCTCTCTGGCATCGTGTGCACTCCCTGCACTCTCTGGCATCGTGTaGACTCCCTGCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLRGHPAKFSLASCALPALSGIV*TPCSLL
Trigger: CAGCAGGCTGCAGGGAGTGCACACGATGCCAGAGAG...TGCAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAGGGTGTCCCCGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp GACACCCTGCTAAGTTCTCTCTGGCATCGTGTGCACTCCCTGCAGCCTGCTGACAGCTGTAAGCGGAGGTaGGAGCTCCGCCGATCGCCA +
Preference number: 4 (lower is better)
Translates to: DTLLSSLWHRVHSLQPADSCKRR*ELRRSP
Trigger: TGGCGATCGGCGGAGCTCCCACCTCCGCTTACAGCT...GTCAGCAGGCTGCAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAGGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp TGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGATTCCACATCGTGGTCTaGTCCAGGTCTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: WKQRAFLSVELPKPLLRGFHIVV*SRSPGG
Trigger: GCCCCCAGGAGACCTGGACCAGACCACGATGTGGAA...TCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp GAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTGCTATCAGCTTCCAGCCACTaGATGATGCGACGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: ERSSPWSFPNLSSGDTLLSASSH*MMRRRS
Trigger: GCTCCGACGTCGCATCATCCAGTGGCTGGAAGCTGA...TAGCAGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp CAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTGAGCGTTCCTCTCCGTaGAGCTTCCCAAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: QRAFLSVELPKPLLRGHPERSSP*SFPNLS
Trigger: GGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTC...AGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR TCA 90 bp GAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACAGTCTGGGCCCCCTTCTaGTTCTTTCCGTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: EAESVPLRGASQTSPPGTVWAPF*FFPSQV
Trigger: GACCTGTGACGGAAAGAATCAGAAGGGGGCCCAGAC...TGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp TGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGAGCACCCTTGCTCCTCTaGCAGATAGTGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: WKQRAFLSVELPKPLLRGAPLLL*QIVDCW
Trigger: CCAGCAGTCCACTATCTGCCAGAGGAGCAAGGGTGC...TCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp GACGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCGTCTGGGCCCCCTTCTaGTTCTTTCCGTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: DGNGKRLEAESVPLRGASVWAPF*FFPSQV
Trigger: GACCTGTGACGGAAAGAATCAGAAGGGGGCCCAGAC...GGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR GCA 90 bp CAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTAGGCAGGCATCTCGATaGAGTTCACAGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QRAFLSVELPKPLLRGHPRQASR*SSQWLR
Trigger: CCTCAACCACTGTGAACTGCATCGAGATGCCTGCCT...AGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR GCA 90 bp ATGCTGACGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTCTCTGGCATCGTGTaGACTCCCTGCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: MLTAMERGWKQRAFLSVELSGIV*TPCSLL
Trigger: CAGCAGGCTGCAGGGAGTGCACACGATGCCAGAGAG...CTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp GACGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCGCTGCATCTAGTATGTaGCAGGGTGGGGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: DGNGKRLEAESVPLRGASAASSM*QGGGIW
Trigger: CCAGATGCCCCCACCCTGCCACATACTAGATGCAGC...GGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp TGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACAAGAGATGCGTGGATaGTGGAGGTCTGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: WKQRAFLSVELPKPLLRGQEMRG*WRSVML
Trigger: CAGCATGACAGACCTCCAGCATCCACGCATCTCTTG...TCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CCA 90 bp AAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTATCCTAAGCCCTGCTTaGCTGCCCTTGTCGCCATCC +
Preference number: 4 (lower is better)
Translates to: KRLEAESVPLRGASQTSPILSPA*LPLSPS
Trigger: GGATGGCGACAAGGGCAGCCAAGCAGGGCTTAGGAT...AGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp ATGCTGACGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGGGAGGTCTGTCATGCTaGCGGCAATGGAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: MLTAMERGWKQRAFLSVEGGLSC*RQWKEA
Trigger: AGCCTCTTTCCATTGCCGTCAGCATGACAGACCTCC...CTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR TCA 90 bp GACGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCGCCTGTCCCTGGCAATaGTTCCATGTTCCCTGTACT +
Preference number: 4 (lower is better)
Translates to: DGNGKRLEAESVPLRGASACPWQ*FHVPCT
Trigger: AGTACAGGGAACATGGAATCATTGCCAGGGACAGGC...GGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp ATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCACACAGGCCTCTTGTaGGGTTTGCATTGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: MERGWKQRAFLSVELPKPHTGLL*GLHCSA
Trigger: CGCCGAGCAATGCAAACCTCACAAGAGGCCTGTGTG...AGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424703.6
CDS-3UTR GCA 90 bp GACACCCTGCTAAGTTCTCTCTGGCATCGTGTGCACTCCCTGCAGCCTGCTGACCTTCTCACAGGCTACTaGAGTCAGCCTCACTGGATG +
Preference number: 4 (lower is better)
Translates to: DTLLSSLWHRVHSLQPADLLTGY*SQPHWM
Trigger: CATCCAGTGAGGCTGACTGCAGTAGCCTGTGAGAAG...GTCAGCAGGCTGCAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAGGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp AAACATAGGTGTAAAGGAAAGACATTCAGACTGGTCCACGTGGGCTTGTTAGCACTGGTCCAGGTCTCCTaGGGGCGCGGGGCAGGACGG +
Preference number: 4 (lower is better)
Translates to: KHRCKGKTFRLVHVGLLALVQVS*GRGAGR
Trigger: CCGTCCTGCCCCGCGCCCCCAGGAGACCTGGACCAG...TGCTAACAAGCCCACGTGGACCAGTCTGAATGTCTTTCCTTTACACCTATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp AGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCAGCAAACAACTGGGCTaGCAGATGGACTTACGGATT +
Preference number: 4 (lower is better)
Translates to: SRERSSPWSFPNLSSGDTSKQLG*QMDLRI
Trigger: AATCCGTAAGTCCATCTGCCAGCCCAGTTGTTTGCT...GGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp GAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTGCTAGGAGCTCATCACGGTTaGACTGATAGCAAACAACTG +
Preference number: 4 (lower is better)
Translates to: ERSSPWSFPNLSSGDTLLGAHHG*TDSKQL
Trigger: CAGTTGTTTGCTATCAGTCCAACCGTGATGAGCTCC...TAGCAGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp CTCCTCCGGGGACACCCTGCTAAGTTCTCTCTGGCATCGTGTGCACTCCCTGCAAAGTGGAGAAGATGCTaGGATCCAGACACTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLRGHPAKFSLASCALPAKWRRC*DPDTGL
Trigger: CAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTT...TGCAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAGGGTGTCCCCGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp GACGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCTGCTAAGTTCTCTCTaGCATCGTGTGCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: DGNGKRLEAESVPLRGASLLSSL*HRVHSL
Trigger: CAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAG...GGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp CAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTTGCAGTCAGCCTCACTaGATGCCATTTAGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: QRAFLSVELPKPLLRGHPCSQPH*MPFSLL
Trigger: TAGGAGACTAAATGGCATCCAGTGAGGCTGACTGCA...AGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp GCGTGGATGCTGGAGGTCTGTCATGCTGACGGCAATGGAAAGAGGCTGGAAGCAGGATTTTGGATCCAGTaGGGCAGGCATCTCGATGCA +
Preference number: 4 (lower is better)
Translates to: AWMLEVCHADGNGKRLEAGFWIQ*GRHLDA
Trigger: TGCATCGAGATGCCTGCCTCACTGGATCCAAAATCC...TGCTTCCAGCCTCTTTCCATTGCCGTCAGCATGACAGACCTCCAGCATCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR GCA 90 bp AGCCCCTGCACCAGGAAGAACCCCAAACTCCTTCCACCTATGAAGTGGTGGGACATTGGGACCAAGAGATaGGTGGATGCTGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SPCTRKNPKLLPPMKWWDIGTKR*VDAGGL
Trigger: CAGACCTCCAGCATCCACGCATCTCTTGGTCCCAAT...GTCCCACCACTTCATAGGTGGAAGGAGTTTGGGGTTCTTCCTGGTGCAGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp CAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTAGTATCTGCATCATTTaGGTGTACCCTCCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: QRAFLSVELPKPLLRGHPSICII*VYPPRN
Trigger: GTTTCTGGGAGGGTACACCCAAATGATGCAGATACT...AGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR TCA 90 bp TGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACATCAGACAGTTCAATaGGAGCATCAACACAGAGTC +
Preference number: 4 (lower is better)
Translates to: WKQRAFLSVELPKPLLRGHQTVQ*EHQHRV
Trigger: GACTCTGTGTTGATGCTCTCATTGAACTGTCTGATG...TCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR TCA 90 bp CGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAGTAGGGTCATCAGGCTaGGATCAAATCTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: RQWKEAGSRERSSPWSFPVGSSG*DQIWSS
Trigger: AGATGACCAGATTTGATCTCAGCCTGATGACCCTAC...TGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp GACGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCGCCTCTTGTGAGGTTTaGATTGCTCAATGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: DGNGKRLEAESVPLRGASASCEV*IAQCRD
Trigger: GTCTCTGCATTGAGCAATGCAAACCTCACAAGAGGC...GGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp CTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACCTCTCTGGCATCGTGTaGACTCCCTGCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LVYTELSAEVEKMLGSRHLSGIV*TPCSLL
Trigger: CAGCAGGCTGCAGGGAGTGCACACGATGCCAGAGAG...GTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR GCA 90 bp GACGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCGGCATAGACGACAGCTaGCCTATTTACACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: DGNGKRLEAESVPLRGASGIDDS*PIYTEA
Trigger: AGCTTCTGTGTAAATAGGGCAGCTGTCGTCTATGCC...GGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp CGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAACTTCAGGAATTCACTaGAGTCCAGGCGAGAATCAC +
Preference number: 4 (lower is better)
Translates to: RQWKEAGSRERSSPWSFPTSGIH*SPGENH
Trigger: GTGATTCTCGCCTGGACTCCAGTGAATTCCTGAAGT...TGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
3UTR CAA 72 bp GTAGGCTGGGATATCCTAAGCCCTGCTTGGCTGCCCTaGTCGCCATCCTTGGGAATACTGATTTGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: VGWDILSPAWLP*SPSLGILICLN
Trigger: GTTGAGGCAAATCAGTATTCCCAAGGATGGCGACAAGGGCAGCCAAGCAGGGCTTAGGATATCCCAGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp TATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCACTTCCAGCCACTGGATaGTGCGACGTCGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: YLEAVIGTKRCVDAGGLSLPATG*CDVGAH
Trigger: ATGAGCTCCGACGTCGCATCATCCAGTGGCTGGAAG...TGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp TGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGATTCCTCTTTCAATCGTaGTGCAGTTTCCTTACTAGC +
Preference number: 4 (lower is better)
Translates to: WKQRAFLSVELPKPLLRGFLFQS*CSFLTS
Trigger: GCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAA...TCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR TCA 90 bp GAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTGCTAAAACTTCCACATGACTaGACCGAAGAAACCTTAAAC +
Preference number: 4 (lower is better)
Translates to: ERSSPWSFPNLSSGDTLLKLPHD*TEETLN
Trigger: GTTTAAGGTTTCTTCGGTTCAGTCATGTGGAAGTTT...TAGCAGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp TGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACTGGTGAGCGTTCCTCTCCGTaGAGCTTCCCAAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: CILNSALKWRRCWDPDTGERSSP*SFPNLS
Trigger: GGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTC...ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp CAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTAACTGTTTACCCCCATaGAATGTGTGTATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: QRAFLSVELPKPLLRGHPNCLPP*NVCIKE
Trigger: TTCCTTGATACACACATTCCATGGGGGTAAACAGTT...AGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp CGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTGCTAAGTCTCATTAGATCTCTTTaGTGCTCACTTCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RSSPWSFPNLSSGDTLLSLIRSL*CSLLLR
Trigger: CCTGAGAAGAAGTGAGCACCAAAGAGATCTAATGAG...ACTTAGCAGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480823.1
3UTR CAA 72 bp GGCCAACTCACCCTCCTAGTTAGTCGAATGAGCATATaGGTAGGCTGGGATATCCTAAGCCCTGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GQLTLLVSRMSI*VGWDILSPAWL
Trigger: CAGCCAAGCAGGGCTTAGGATATCCCAGCCTACCAATATGCTCATTCGACTAACTAGGAGGGTGAGTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CAA 72 bp CCCTCCTCCCATAGTGTCCAAGGGCTGGTAAAACCTTaGATTAAGGCGTGCTGCTGTGAGTTCTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PSSHSVQGLVKP*IKACCCEFSKA
Trigger: TGCCTTGGAGAACTCACAGCAGCACGCCTTAATCAAAGGTTTTACCAGCCCTTGGACACTATGGGAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp ATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTTTTTCAGCTGTTTCCTaGTGCTTTTGGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: MERGWKQRAFLSVELPKPFSAVS*CFWSSW
Trigger: CCAGGAGCTCCAAAAGCATCAGGAAACAGCTGAAAA...AGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR TCA 90 bp GACGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCTTCCTCTTTCAATCGTaGTGCAGTTTCCTTACTAGC +
Preference number: 4 (lower is better)
Translates to: DGNGKRLEAESVPLRGASFLFQS*CSFLTS
Trigger: GCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAA...GGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR TCA 90 bp AAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTGCACCTGCTATGGTTTaGATGTTTATGTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: KRLEAESVPLRGASQTSPAPAMV*MFMSPK
Trigger: TTTGGGGGACATAAACATTCAAACCATAGCAGGTGC...AGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp AGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGACCTGAAGTGGAGAAGATaGTGGGATCCAGACACTGGT +
Preference number: 4 (lower is better)
Translates to: RQLLGPRDAWMLEVCHADLKWRR*WDPDTG
Trigger: ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAG...GTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR GCA 90 bp CTCCTCCGGGGACACCCTGCTAAGTTCTCTCTGGCATCGTGTGCACTCCCTGCAAGAGGAATGTGGATTTaGTCTTGGGAGTTCAATGTT +
Preference number: 4 (lower is better)
Translates to: LLRGHPAKFSLASCALPARGMWI*SWEFNV
Trigger: AACATTGAACTCCCAAGAGCAAATCCACATTCCTCT...TGCAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAGGGTGTCCCCGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp GTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTTCTCTTAAAGCAGCCTCTTGTGAGGTTTaGATTGCTCGGCGCGGACCC +
Preference number: 4 (lower is better)
Translates to: VSLLASSPRAPFTVSLKAASCEV*IARRGP
Trigger: GGGTCCGCGCCGAGCAATGCAAACCTCACAAGAGGC...TGCTTTAAGAGAAACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424703.6
CDS-3UTR CCA 90 bp CGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTTCTAGCGTTTCCACATCGTaGTCTGGTCCAGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RDAVSLLASSPRAPFTVSSVSTS*SGPGLL
Trigger: CAGGAGACCTGGACCAGACCACGATGTGGAAACGCT...AGAAACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp AATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCAGCAAACAACTGGGCTaGCAGATGGACTTACGGATT +
Preference number: 4 (lower is better)
Translates to: NGKRLEAESVPLRGASQTSKQLG*QMDLRI
Trigger: AATCCGTAAGTCCATCTGCCAGCCCAGTTGTTTGCT...GGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp GCGTGGATGCTGGAGGTCTGTCATGCTGACGGCAATGGAAAGAGGCTGGAAGCAAGGAGGGTTGAAAGATaGGTTGAGGCACTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: AWMLEVCHADGNGKRLEARRVER*VEALEK
Trigger: TTTCTCAAGTGCCTCAACCCATCTTTCAACCCTCCT...TGCTTCCAGCCTCTTTCCATTGCCGTCAGCATGACAGACCTCCAGCATCCACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp TCCTCTTTCAATCGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCACTGCTAAGTTCTCTCTaGCATCGTGTGCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: SSFNRDAVSLLASSPRAPLLSSL*HRVHSL
Trigger: CAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAG...TGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACGATTGAAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp TGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACTGGTGAGATGCGTGGATGCTaGAGGTCTGTCATGCTGACG +
Preference number: 4 (lower is better)
Translates to: CILNSALKWRRCWDPDTGEMRGC*RSVMLT
Trigger: CGTCAGCATGACAGACCTCCAGCATCCACGCATCTC...ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp CAGACACTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCGAGATGCGTGGATGCTaGAGGTCTGTCATGCTGACG +
Preference number: 4 (lower is better)
Translates to: QTLVYTELSAEVEKMLGSEMRGC*RSVMLT
Trigger: CGTCAGCATGACAGACCTCCAGCATCCACGCATCTC...GGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAGTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR TCA 90 bp GTCCCAGGAGAAACTCTTCAGTCCTTTTTAAGGCTCCTGAAACTCAAATCCACTGTTCCCCTTTCTCTGTaGCTGCACATTCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: VPGETLQSFLRLLKLKSTVPLSL*LHIPGR
Trigger: CCGGCCGGGAATGTGCAGTCACAGAGAAAGGGGAAC...AGTGGATTTGAGTTTCAGGAGCCTTAAAAAGGACTGAAGAGTTTCTCCTGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp GGCGACTGTAGCAGACACTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGAACCAGCCATCTGGAATaGTCTCAGCTTCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: GDCSRHLCILNSALKWRRTSHLE*SQLPAT
Trigger: AGTGGCTGGAAGCTGAGATCATTCCAGATGGCTGGT...TCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAGTGTCTGCTACAGTCGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR TCA 90 bp CTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACACCAGCCATCTGGAATaGTCTCAGCTTCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: LVYTELSAEVEKMLGSRHTSHLE*SQLPAT
Trigger: AGTGGCTGGAAGCTGAGATCATTCCAGATGGCTGGT...GTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR TCA 90 bp AGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGACGGCATTTTCAGCTGTTTCCTaGTGCTTTTGGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SYWDQEMRGCWRSVMLTAFSAVS*CFWSSW
Trigger: CCAGGAGCTCCAAAAGCATCAGGAAACAGCTGAAAA...TGCCGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp GGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGACGTATTCCAAATGCATCTaGAACAGGGTAGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GSYWDQEMRGCWRSVMLTYSKCI*NRVVSG
Trigger: CCCACTCACTACCCTGTTTCAGATGCATTTGGAATA...CGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp AGCCCCTGCACCAGGAAGAACCCCAAACTCCTTCCACCTATGAAGTGGTGGGACAAAAGGTGCATTCTTTaGAGCAGGCAAGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: SPCTRKNPKLLPPMKWWDKRCIL*SRQAST
Trigger: TGTTGAAGCTTGCCTGCTTCAAAGAATGCACCTTTT...GTCCCACCACTTCATAGGTGGAAGGAGTTTGGGGTTCTTCCTGGTGCAGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp ACATTCAGACTGGTCCACGTGGGCTTGTTAGCAGGCAGAGGAACCCTGCTTTCCATTATTCCAGGGCTCTaGAGGCATCTGCTTAGATCT +
Preference number: 4 (lower is better)
Translates to: TFRLVHVGLLAGRGTLLSIIPGL*RHLLRS
Trigger: AGATCTAAGCAGATGCCTTCAGAGCCCTGGAATAAT...GGAAAGCAGGGTTCCTCTGCCTGCTAACAAGCCCACGTGGACCAGTCTGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp AGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGCACAGATCTTGGATTTaGTCCTTAGCTCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RGSYWDQEMRGCWRSVMLHRSWI*SLALPR
Trigger: CCGAGGAAGAGCTAAGGAGCAAATCCAAGATCTGTG...CAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp ATTAAGGCGTGCTGCTGTGAGTTCTCCAAGGCACTTGGACAGGGAGCTGCATTTAGGTCTTGCCATTACTaGCACACACAGGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: IKACCCEFSKALGQGAAFRSCHY*HTQASC
Trigger: ACAAGAGGCCTGTGTGTGGCAGTAATGGCAAGACCT...AAATGCAGCTCCCTGTCCAAGTGCCTTGGAGAACTCACAGCAGCACGCCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp AGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGACGGCACCTTTGATTAAGGCGTaGTGCTGTGAGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SYWDQEMRGCWRSVMLTAPLIKA*CCEFSK
Trigger: CTTGGAGAACTCACAGCAGCACGCCTTAATCAAAGG...TGCCGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp CAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTAGCTGTAAGCGGAGGTaGGAGCTCCGCCGATCGCCA +
Preference number: 4 (lower is better)
Translates to: QKRFRFGSVPLSIVMQFPSCKRR*ELRRSP
Trigger: TGGCGATCGGCGGAGCTCCCACCTCCGCTTACAGCT...AGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp GGGGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTTCAGCTTCCAGCCACTaGATGATGCGACGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GAQSIQVSASFGCTLPETSASSH*MMRRRS
Trigger: GCTCCGACGTCGCATCATCCAGTGGCTGGAAGCTGA...AGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp TGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCGCTCCTGGACATATCTaGTCATCTCCTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: WVCSSFNRDAVSLLASSPAPGHI*SSPPLS
Trigger: AGACAGAGGAGGAGATGACCAGATATGTCCAGGAGC...GGGGCTGGAGGCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAACAGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp CGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTTCTGCAATGGAAAGAGGCTaGAAGCAGAGAGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RDAVSLLASSPRAPFTVSAMERG*KQRAFL
Trigger: GAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGC...AGAAACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp GAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACTCTTAGGAAGTAAATaGGTAATGTTCTCACGACTT +
Preference number: 4 (lower is better)
Translates to: EAESVPLRGASQTSPPGTLLGSK*VMFSRL
Trigger: AAGTCGTGAGAACATTACCCATTTACTTCCTAAGAG...TGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp CAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTTATAATATGCTCTTTTaGGAGGCAGAATTATTGTGG +
Preference number: 4 (lower is better)
Translates to: QRAFLSVELPKPLLRGHPYNMLF*EAELLW
Trigger: CCACAATAATTCTGCCTCCCAAAAGAGCATATTATA...AGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CAA 72 bp CACCATGCAACAGCCCCCAGCAGCAGTAGGCCAGAGTaGTTTTCATGTCCCATATCCCAGCTAGGATTATTC +
Preference number: 4 (lower is better)
Translates to: HHATAPSSSRPE*FSCPISQLGLF
Trigger: GAATAATCCTAGCTGGGATATGGGACATGAAAACAACTCTGGCCTACTGCTGCTGGGGGCTGTTGCATGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp ATGCTGACGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGGAAACTCTTGGAAGCTaGGTTTCCAATCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: MLTAMERGWKQRAFLSVEETLGS*VSNQHF
Trigger: AAAATGCTGATTGGAAACTCAGCTTCCAAGAGTTTC...CTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR TCA 90 bp GGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGACGATAAGCAAATACTGGTaGTTTGGCGACTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: GSYWDQEMRGCWRSVMLTISKYW*FGDCSR
Trigger: TCTGCTACAGTCGCCAAATCACCAGTATTTGCTTAT...CGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR TCA 90 bp ATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCATGAAATGCAAATATaGAGACAGAGTGGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: MERGWKQRAFLSVELPKPHEMQI*RQSGVV
Trigger: AACCACCCCACTCTGTCTTCATATTTGCATTTCATG...AGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp GGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATCGTGTGCACTCCCTaGAGCCTGCTGACAGATGCA +
Preference number: 4 (lower is better)
Translates to: GSKYTSICIIWVYPPRNSIVCTP*SLLTDA
Trigger: TGCATCTGTCAGCAGGCTGCAGGGAGTGCACACGAT...GGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR GCA 90 bp ACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTAATCGTGTGCACTCCCTaGAGCCTGCTGACAGATGCA +
Preference number: 4 (lower is better)
Translates to: TVSLKALLEMKAVALPFLIVCTP*SLLTDA
Trigger: TGCATCTGTCAGCAGGCTGCAGGGAGTGCACACGAT...TAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR GCA 90 bp CAGAAACTCCATCCAAGTCTGAGGGACACTGGGTTAACTAGCAGTATGGCTATGCAAGAGATGCGTGGATaGTGGAGGTCTGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: QKLHPSLRDTGLTSSMAMQEMRG*WRSVML
Trigger: CAGCATGACAGACCTCCAGCATCCACGCATCTCTTG...CATAGCCATACTGCTAGTTAACCCAGTGTCCCTCAGACTTGGATGGAGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR GCA 90 bp AGACACTGTGGTTTCTTGCTTTTAACAAATTGGTGTACTCTTGCCCTCCTCCCAGGATATCCTAAGCCCTaGTTGGCTGCCCTTGTCGCC +
Preference number: 4 (lower is better)
Translates to: RHCGFLLLTNWCTLALLPGYPKP*LAALVA
Trigger: GGCGACAAGGGCAGCCAAGCAGGGCTTAGGATATCC...TGGGAGGAGGGCAAGAGTACACCAATTTGTTAAAAGCAAGAAACCACAGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp GTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTTCTCTTAAAGCAAGCGTTTCCACATCGTaGTCTGGTCCAGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VSLLASSPRAPFTVSLKASVSTS*SGPGLL
Trigger: CAGGAGACCTGGACCAGACCACGATGTGGAAACGCT...TGCTTTAAGAGAAACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp ATTAAGGCGTGCTGCTGTGAGTTCTCCAAGGCACTTGGACAGGGAGCTGCATTTCTGATAGCAAACAACTaGGCTGGCAGATGGACTTAC +
Preference number: 4 (lower is better)
Translates to: IKACCCEFSKALGQGAAFLIANN*AGRWTY
Trigger: GTAAGTCCATCTGCCAGCCCAGTTGTTTGCTATCAG...AAATGCAGCTCCCTGTCCAAGTGCCTTGGAGAACTCACAGCAGCACGCCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp TGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGAACCAGCCATCTaGAATGATCTCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: WVCSSFNRDAVSLLASSPREPAI*NDLSFQ
Trigger: CTGGAAGCTGAGATCATTCCAGATGGCTGGTTCTCT...GGGGCTGGAGGCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAACAGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp TGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACTGGTGCTCCTGGACATATCTaGTCATCTCCTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CILNSALKWRRCWDPDTGAPGHI*SSPPLS
Trigger: AGACAGAGGAGGAGATGACCAGATATGTCCAGGAGC...ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp CAGACACTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAACTCAGCGCTGAAGTaGAGAAGATGCTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: QTLVYTELSAEVEKMLGSNSALK*RRCWDP
Trigger: TGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTT...GGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp AATCGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTGGACCAAGAGATGCGTaGATGCTGGAGGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: NRDAVSLLASSPRAPFTVGPRDA*MLEVCH
Trigger: ATGACAGACCTCCAGCATCCACGCATCTCTTGGTCC...AACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CCA 90 bp ATGTTTATTTGCCTTCTCACAGGCTACTGCAGTCAGCCTCACTGGATGCCATTTAGATGCTTCTTCCCCTaGCTTCGGTCTAAGGCACCC +
Preference number: 4 (lower is better)
Translates to: MFICLLTGYCSQPHWMPFRCFFP*LRSKAP
Trigger: GGGTGCCTTAGACCGAAGCCAGGGGAAGAAGCATCT...AAATGGCATCCAGTGAGGCTGACTGCAGTAGCCTGTGAGAAGGCAAATAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp CAGAAACTCCATCCAAGTCTGAGGGACACTGGGTTAACTAGCAGTATGGCTATGCACACAGGCCTCTTGTaGGGTTTGCATTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: QKLHPSLRDTGLTSSMAMHTGLL*GLHCSM
Trigger: CATTGAGCAATGCAAACCTCACAAGAGGCCTGTGTG...CATAGCCATACTGCTAGTTAACCCAGTGTCCCTCAGACTTGGATGGAGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp ACTAGCAGTATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGGATTTTGGATCCAGTaGGGCAGGCATCTCGATGCA +
Preference number: 4 (lower is better)
Translates to: TSSMAMYLEAVIGTKRCVGFWIQ*GRHLDA
Trigger: TGCATCGAGATGCCTGCCTCACTGGATCCAAAATCC...CACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCATACTGCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp TCCTCTTTCAATCGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCACTGCTTTCCAAAAACTaGTATAGTCCAGAGTCACGG +
Preference number: 4 (lower is better)
Translates to: SSFNRDAVSLLASSPRAPLLSKN*YSPESR
Trigger: CCGTGACTCTGGACTATATCAGTTTTTGGAAAGCAG...TGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACGATTGAAAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp GGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGACGCGGATTTCTTCTCTTTaGAGTGTCCATCGTAATCAA +
Preference number: 4 (lower is better)
Translates to: GSYWDQEMRGCWRSVMLTRISSL*SVHRNQ
Trigger: TTGATTACGATGGACACTGCAAAGAGAAGAAATCCG...CGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp CGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTTCTCCAGACACTGGTCTGTaGCTCCTCATTAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: RDAVSLLASSPRAPFTVSPDTGL*LLIRSL
Trigger: AAGAGATCTAATGAGGAGGCACAGACCAGTGTCTGG...AGAAACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp GGCGACTGTAGCAGACACTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGAGGAGCTCATCACGGTTaGACTGATAGCAAACAACTG +
Preference number: 4 (lower is better)
Translates to: GDCSRHLCILNSALKWRRGAHHG*TDSKQL
Trigger: CAGTTGTTTGCTATCAGTCCAACCGTGATGAGCTCC...TCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAGTGTCTGCTACAGTCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp TATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCAAGAGAACCAGCCATCTaGAATGATCTCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: YLEAVIGTKRCVDAGGLSREPAI*NDLSFQ
Trigger: CTGGAAGCTGAGATCATTCCAGATGGCTGGTTCTCT...TGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp CGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTTCTACTTCAGGAATTCACTaGAGTCCAGGCGAGAATCAC +
Preference number: 4 (lower is better)
Translates to: RDAVSLLASSPRAPFTVSTSGIH*SPGENH
Trigger: GTGATTCTCGCCTGGACTCCAGTGAATTCCTGAAGT...AGAAACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp CGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTTCTTGCTTTTGGAGCTCCTaGACATATCTGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: RDAVSLLASSPRAPFTVSCFWSS*TYLVIS
Trigger: GGAGATGACCAGATATGTCCAGGAGCTCCAAAAGCA...AGAAACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp AATCGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTAAGTGGAGAAGATGCTaGGATCCAGACACTGGTCTG +
Preference number: 4 (lower is better)
Translates to: NRDAVSLLASSPRAPFTVKWRRC*DPDTGL
Trigger: CAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTT...AACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp GGGGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTGCAATGGAAAGAGGCTaGAAGCAGAGAGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GAQSIQVSASFGCTLPETAMERG*KQRAFL
Trigger: GAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGC...AGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CCA 90 bp ACTAGCAGTATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGCAATGGAAAGAGGCTaGAAGCAGAGAGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSSMAMYLEAVIGTKRCVAMERG*KQRAFL
Trigger: GAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGC...CACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCATACTGCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CCA 90 bp GGGGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTGGACCAAGAGATGCGTaGATGCTGGAGGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: GAQSIQVSASFGCTLPETGPRDA*MLEVCH
Trigger: ATGACAGACCTCCAGCATCCACGCATCTCTTGGTCC...AGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
3UTR CAA 72 bp TGTAAAGGAAAGACATTCAGACTGGTCCACGTGGGCTaGTTAGCAGGCAGAGGAACCCTGCTTTCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: CKGKTFRLVHVG*LAGRGTLLSKN
Trigger: GTTTTTGGAAAGCAGGGTTCCTCTGCCTGCTAACAAGCCCACGTGGACCAGTCTGAATGTCTTTCCTTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp CAGAAACTCCATCCAAGTCTGAGGGACACTGGGTTAACTAGCAGTATGGCTATGAACTCCTTCCACCTATaGAGTGGTGGGACTACTGAA +
Preference number: 4 (lower is better)
Translates to: QKLHPSLRDTGLTSSMAMNSFHL*SGGTTE
Trigger: TTCAGTAGTCCCACCACTTCATAGGTGGAAGGAGTT...CATAGCCATACTGCTAGTTAACCCAGTGTCCCTCAGACTTGGATGGAGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp ACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTAAGGTCTTGCCATTACTaGCACACACAGGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TVSLKALLEMKAVALPFLRSCHY*HTQASC
Trigger: ACAAGAGGCCTGTGTGTGGCAGTAATGGCAAGACCT...TAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR GCA 90 bp TGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACTGGTCAGCCTGCTGACAGATaGAGTAAACTCAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: CILNSALKWRRCWDPDTGQPADR*SKLKRG
Trigger: ACCTCTTTTGAGTTTACTGCATCTGTCAGCAGGCTG...ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR GCA 90 bp TCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCATCGTGTGCACTCCCTaGAGCCTGCTGACAGATGCA +
Preference number: 4 (lower is better)
Translates to: SKEVQIWVCSSFNRDAVSIVCTP*SLLTDA
Trigger: TGCATCTGTCAGCAGGCTGCAGGGAGTGCACACGAT...GGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR GCA 90 bp CAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTTACTAGCCTCCGGTTATTTCAGCCCCTaGACCAGGAAGAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: QIWVCSSFNRDAVSLLASGYFSP*TRKNPK
Trigger: TTTGGGGTTCTTCCTGGTGCAGGGGCTGAAATAACC...GGAGGCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp CAGAAACTCCATCCAAGTCTGAGGGACACTGGGTTAACTAGCAGTATGGCTATGTTGATTAAGGCGTGCTaGTGTGAGTTCTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: QKLHPSLRDTGLTSSMAMLIKAC*CEFSKA
Trigger: TGCCTTGGAGAACTCACAGCAGCACGCCTTAATCAA...CATAGCCATACTGCTAGTTAACCCAGTGTCCCTCAGACTTGGATGGAGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp TTTACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCAAGCCCAAGGAAGCCTaGAGGCTAAGCCCTATGCTT +
Preference number: 4 (lower is better)
Translates to: FTVSLKALLEMKAVALPFKPKEA*RLSPML
Trigger: AAGCATAGGGCTTAGCCTGCAGGCTTCCTTGGGCTT...GAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp GTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTAGCCAGGAGGGTTGAAAGATaGGTTGAGGCACTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: VSLKALLEMKAVALPFLARRVER*VEALEK
Trigger: TTTCTCAAGTGCCTCAACCCATCTTTCAACCCTCCT...GGCTAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp CCAAGTCTGAGGGACACTGGGTTAACTAGCAGTATGGCTATGTATCTAGAGGCATGCTTTTGGAGCTCCTaGACATATCTGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PSLRDTGLTSSMAMYLEACFWSS*TYLVIS
Trigger: GGAGATGACCAGATATGTCCAGGAGCTCCAAAAGCA...TGCCTCTAGATACATAGCCATACTGCTAGTTAACCCAGTGTCCCTCAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp CGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTTCTTGGTGCTCACTCTCTTaGTCTTTTCAGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: RDAVSLLASSPRAPFTVSWCSLS*SFQLFP
Trigger: AGGAAACAGCTGAAAAGACCAAGAGAGTGAGCACCA...AGAAACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp CAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTTACTAGCCTCCAACTCAGCGCTGAAGTaGAGAAGATGCTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: QIWVCSSFNRDAVSLLASNSALK*RRCWDP
Trigger: TGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTT...GGAGGCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp AAACAAGGAGTTACCATTTTTCCTCTATCAGAGGCCAAAAAGTTCGAAGGCACAGAGCGTTCCTCTCCGTaGAGCTTCCCAAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: KQGVTIFPLSEAKKFEGTERSSP*SFPNLS
Trigger: GGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTC...TGTGCCTTCGAACTTTTTGGCCTCTGATAGAGGAAAAATGGTAACTCCTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp TCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATCGAGATGCGTGGATGCTaGAGGTCTGTCATGCTGACG +
Preference number: 4 (lower is better)
Translates to: SKYTSICIIWVYPPRNSIEMRGC*RSVMLT
Trigger: CGTCAGCATGACAGACCTCCAGCATCCACGCATCTC...GATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CCA 90 bp CCAAGTCTGAGGGACACTGGGTTAACTAGCAGTATGGCTATGTATCTAGAGGCATCTAGAGGCAGTTATTaGGACCAAGAGATGCGTGGA +
Preference number: 4 (lower is better)
Translates to: PSLRDTGLTSSMAMYLEASRGSY*DQEMRG
Trigger: TCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGA...TGCCTCTAGATACATAGCCATACTGCTAGTTAACCCAGTGTCCCTCAGACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CCA 90 bp TATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCACCATGCAAAACTTTATaGAAGACTCCCCAGACTAGG +
Preference number: 4 (lower is better)
Translates to: YLEAVIGTKRCVDAGGLSPCKTL*KTPQTR
Trigger: CCTAGTCTGGGGAGTCTTCCATAAAGTTTTGCATGG...TGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp ACTAGCAGTATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGCAGAGTCACGGCATGTaGGAATGTTTCCATGGACAC +
Preference number: 4 (lower is better)
Translates to: TSSMAMYLEAVIGTKRCVQSHGM*ECFHGH
Trigger: GTGTCCATGGAAACATTCCCACATGCCGTGACTCTG...CACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCATACTGCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp TGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACTGGTATAAGCAAATACTGGTaGTTTGGCGACTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: CILNSALKWRRCWDPDTGISKYW*FGDCSR
Trigger: TCTGCTACAGTCGCCAAATCACCAGTATTTGCTTAT...ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR TCA 90 bp GAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGGGTGGAGGTCTGTCATGCTaGCGGCAATGGAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: EVSQNLKVVVDKVPFKLGGGLSC*RQWKEA
Trigger: AGCCTCTTTCCATTGCCGTCAGCATGACAGACCTCC...ACCCAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp TATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGTTCCTGCTTTACCCATaGGGACTCCATATCATAGCA +
Preference number: 4 (lower is better)
Translates to: YGYVSRGSYWDQEMRGCWFLLYP*GLHIIA
Trigger: TGCTATGATATGGAGTCCTCATGGGTAAAGCAGGAA...CCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp AGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGACATTAGATCTCTTTGGTaGTCACTCTCTTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: RQLLGPRDAWMLEVCHADIRSLW*SLSWSF
Trigger: AAAAGACCAAGAGAGTGAGCACCAAAGAGATCTAAT...GTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp GGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCCCAGACACTGGTCTGTaGCTCCTCATTAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: GSKYTSICIIWVYPPRNSPDTGL*LLIRSL
Trigger: AAGAGATCTAATGAGGAGGCACAGACCAGTGTCTGG...GGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR GCA 90 bp GGGGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCAGACACTGGTCTGTaGCTCCTCATTAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: GAQSIQVSASFGCTLPETPDTGL*LLIRSL
Trigger: AAGAGATCTAATGAGGAGGCACAGACCAGTGTCTGG...AGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR GCA 90 bp GTCCCAGGAGAAACTCTTCAGTCCTTTTTAAGGCTCCTGAAACTCAAATCCACTCTGAAGTGGAGAAGATaGTGGGATCCAGACACTGGT +
Preference number: 4 (lower is better)
Translates to: VPGETLQSFLRLLKLKSTLKWRR*WDPDTG
Trigger: ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAG...AGTGGATTTGAGTTTCAGGAGCCTTAAAAAGGACTGAAGAGTTTCTCCTGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp TTTACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTGAAGTGGAGAAGATaGTGGGATCCAGACACTGGT +
Preference number: 4 (lower is better)
Translates to: FTVSLKALLEMKAVALPFLKWRR*WDPDTG
Trigger: ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAG...GAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR GCA 90 bp TCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATCATTGGGACCAAGAGATaGGTGGATGCTGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SKYTSICIIWVYPPRNSIIGTKR*VDAGGL
Trigger: CAGACCTCCAGCATCCACGCATCTCTTGGTCCCAAT...GATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR GCA 90 bp AGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGACGGCAAAGTATACAAGTATCTaGATCATTTGGGTGTACCCT +
Preference number: 4 (lower is better)
Translates to: SYWDQEMRGCWRSVMLTAKYTSI*IIWVYP
Trigger: AGGGTACACCCAAATGATGCAGATACTTGTATACTT...TGCCGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CCA 90 bp ACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTAAACTGGGCTGGCAGATaGACTTACGGATTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TVSLKALLEMKAVALPFLNWAGR*TYGFLL
Trigger: GAGAAGAAATCCGTAAGTCCATCTGCCAGCCCAGTT...TAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp CAGCCTGCTGACAGATGCAGTAAACTCAAAAGAGGTTCAGATTTGGGTCTGTTCTTCCGTCACAGGTCATaGCTGTACAGACCCAATTTC +
Preference number: 4 (lower is better)
Translates to: QPADRCSKLKRGSDLGLFFRHRS*LYRPNF
Trigger: GAAATTGGGTCTGTACAGCCATGACCTGTGACGGAA...GAACAGACCCAAATCTGAACCTCTTTTGAGTTTACTGCATCTGTCAGCAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp GTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTAGCCCTCATTAGATCTCTTTaGTGCTCACTCTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: VSLKALLEMKAVALPFLALIRSL*CSLSWS
Trigger: AGACCAAGAGAGTGAGCACCAAAGAGATCTAATGAG...GGCTAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp AAACATAGGTGTAAAGGAAAGACATTCAGACTGGTCCACGTGGGCTTGTTAGCAAAGTGGAGAAGATGCTaGGATCCAGACACTGGTCTG +
Preference number: 4 (lower is better)
Translates to: KHRCKGKTFRLVHVGLLAKWRRC*DPDTGL
Trigger: CAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTT...TGCTAACAAGCCCACGTGGACCAGTCTGAATGTCTTTCCTTTACACCTATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp CAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTCTGCTAAGTTCTCTCTaGCATCGTGTGCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: QKRFRFGSVPLSIVMQFPLLSSL*HRVHSL
Trigger: CAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAG...AGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp TATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAATATGAAGACAGAGTaGGGTGGTTCTCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: YGYVSRGSYWDQEMRGCWNMKTE*GGSLSH
Trigger: GTGGGAAAGAGAACCACCCCACTCTGTCTTCATATT...CCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp GGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCTTTCCCAGAACATGGTaGAAGGTTGGGAAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: GSKYTSICIIWVYPPRNSFPRTW*KVGKLA
Trigger: GGCTAACTTCCCAACCTTCCACCATGTTCTGGGAAA...GGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CAA 72 bp GCTAAGGGGCTCAAAGTATACAAGTATCTGCATCATTaGGGTGTACCCTCCCAGAAACTCCATCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: AKGLKVYKYLHH*GVPSQKLHPSL
Trigger: CAGACTTGGATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCCCCTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR TCA 90 bp TCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCGGTCCTCAGATCATGTaGTTCTACGGCATAGACGAC +
Preference number: 4 (lower is better)
Translates to: SKEVQIWVCSSFNRDAVSGPQIM*FYGIDD
Trigger: GTCGTCTATGCCGTAGAATCACATGATCTGAGGACC...GGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp CAGAAACTCCATCCAAGTCTGAGGGACACTGGGTTAACTAGCAGTATGGCTATGCAGACCCACTATCCATaGTCCTTTCAAAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: QKLHPSLRDTGLTSSMAMQTHYP*SFQRNL
Trigger: CAAGTTTCTTTGAAAGGATCATGGATAGTGGGTCTG...CATAGCCATACTGCTAGTTAACCCAGTGTCCCTCAGACTTGGATGGAGTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp GGGGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCAGCCTTCAGAACTGTaGGCAATACATTTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GAQSIQVSASFGCTLPETQPSEL*AIHFCC
Trigger: GCAACAGAAATGTATTGCTCACAGTTCTGAAGGCTG...AGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp ACACTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGAAACATTAATTCTCATTaGCAGGAAGACCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TLVYTELSAEVEKMLGSRNINSH*QEDPPS
Trigger: GGAAGGAGGGTCTTCCTGTCAATGAGAATTAATGTT...TCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp TGGGAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGAGGCAGGCATCTCGATaGAGTTCACAGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WEVSQNLKVVVDKVPFKLRQASR*SSQWLR
Trigger: CCTCAACCACTGTGAACTGCATCGAGATGCCTGCCT...CAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp ACTAGCAGTATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGCAGCCTGCTGACAGATaGAGTAAACTCAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: TSSMAMYLEAVIGTKRCVQPADR*SKLKRG
Trigger: ACCTCTTTTGAGTTTACTGCATCTGTCAGCAGGCTG...CACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCATACTGCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR GCA 90 bp ACACTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACAGGCAGAGGAACCCTaGTTTCCAAAAACTGATATA +
Preference number: 4 (lower is better)
Translates to: TLVYTELSAEVEKMLGSRQAEEP*FPKTDI
Trigger: TATATCAGTTTTTGGAAAGCAGGGTTCCTCTGCCTG...TCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp TATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATACTTTTGGCAGTCATaGATACTGGTGCAACTTCTT +
Preference number: 4 (lower is better)
Translates to: YLEAVIGTKRCVDAGGLSYFWQS*ILVQLL
Trigger: AAGAAGTTGCACCAGTATGCATGACTGCCAAAAGTA...TGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp TATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGCTCCACAAAACACATTaGCACAGATCTTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: YGYVSRGSYWDQEMRGCWLHKTH*HRSWIC
Trigger: GCAAATCCAAGATCTGTGCCAATGTGTTTTGTGGAG...CCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp TTTACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTGATAGCAAACAACTaGGCTGGCAGATGGACTTAC +
Preference number: 4 (lower is better)
Translates to: FTVSLKALLEMKAVALPFLIANN*AGRWTY
Trigger: GTAAGTCCATCTGCCAGCCCAGTTGTTTGCTATCAG...GAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp TGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACTGGTCACTTGAGAAACTCTTaGAAGCTGAGTTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: CILNSALKWRRCWDPDTGHLRNS*KLSFQS
Trigger: TGATTGGAAACTCAGCTTCCAAGAGTTTCTCAAGTG...ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp TTTACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCTCTAGAGGCAGTTATTaGGACCAAGAGATGCGTGGA +
Preference number: 4 (lower is better)
Translates to: FTVSLKALLEMKAVALPFSRGSY*DQEMRG
Trigger: TCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGA...GAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CCA 90 bp CTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATGAAGACAGAGTGGGGTaGTTCTCTTTCCCACTCTCT +
Preference number: 4 (lower is better)
Translates to: LKVYKYLHHLGVPSQKLHEDRVG*FSFPLS
Trigger: AGAGAGTGGGAAAGAGAACCACCCCACTCTGTCTTC...ATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp AGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGAAGGAATTCTATTTTTaGCACAACAGTTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: RGSYWDQEMRGCWRSVMLKEFYF*HNSFSQ
Trigger: CTGTGAGAAACTGTTGTGCCAAAAATAGAATTCCTT...CAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp ATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAAGCAGCTTCCATGAATaGTCCTCAGATCATGTGATT +
Preference number: 4 (lower is better)
Translates to: MAMYLEAVIGTKRCVDAGSSFHE*SSDHVI
Trigger: AATCACATGATCTGAGGACCATTCATGGAAGCTGCT...TCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp CAGAAACTCCATCCAAGTCTGAGGGACACTGGGTTAACTAGCAGTATGGCTATGGGAATGCACCTGCTATaGTTTGAATGTTTATGTCCC +
Preference number: 4 (lower is better)
Translates to: QKLHPSLRDTGLTSSMAMGMHLL*FECLCP
Trigger: GGGACATAAACATTCAAACCATAGCAGGTGCATTCC...CATAGCCATACTGCTAGTTAACCCAGTGTCCCTCAGACTTGGATGGAGTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp ACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTATTCCTCTTTCAATCGTaGTGCAGTTTCCTTACTAGC +
Preference number: 4 (lower is better)
Translates to: TVSLKALLEMKAVALPFLFLFQS*CSFLTS
Trigger: GCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAA...TAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR TCA 90 bp TCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCAGGACTAACTGTAAATaGCTGACCTCCCCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SKEVQIWVCSSFNRDAVSRTNCK*LTSPSH
Trigger: GTGACTTGGGGAGGTCAGTCATTTACAGTTAGTCCT...GGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp GTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTAGCCTCTGCTTTCTGCAAATaGGATCTTATGTCAAGGATT +
Preference number: 4 (lower is better)
Translates to: VSLKALLEMKAVALPFLASAFCK*DLMSRI
Trigger: AATCCTTGACATAAGATCTCATTTGCAGAAAGCAGA...GGCTAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp GTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTTCTCTTAAAGCAAGCAAAACTTCCACATaGCTGAACCGAAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: VSLLASSPRAPFTVSLKASKTST*LNRRNL
Trigger: AAGGTTTCTTCGGTTCAGTCATGTGGAAGTTTTGCT...TGCTTTAAGAGAAACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp GAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGGGTGTTTGCATTGCTCAATaGAGAGACAGGTGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: EVSQNLKVVVDKVPFKLGVCIAQ*RDRWVP
Trigger: GGGAACCCACCTGTCTCTGCATTGAGCAATGCAAAC...ACCCAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp TGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACTGGTATTAGATCTCTTTGGTaGTCACTCTCTTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: CILNSALKWRRCWDPDTGIRSLW*SLSWSF
Trigger: AAAAGACCAAGAGAGTGAGCACCAAAGAGATCTAAT...ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR GCA 90 bp TATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCAAAGTATACAAGTATCTaGATCATTTGGGTGTACCCT +
Preference number: 4 (lower is better)
Translates to: YLEAVIGTKRCVDAGGLSKYTSI*IIWVYP
Trigger: AGGGTACACCCAAATGATGCAGATACTTGTATACTT...TGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR GCA 90 bp CAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTTACTAGCCTCCATTAGATCTCTTTGGTaGTCACTTCTTCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QIWVCSSFNRDAVSLLASIRSLW*SLLLRR
Trigger: CCTCCTGAGAAGAAGTGAGCACCAAAGAGATCTAAT...GGAGGCTAGTAAGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480823.1
CDS-3UTR CCA 90 bp ACTAGCAGTATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGCATTGGCACAGATCTTaGATTTGCTCCTTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TSSMAMYLEAVIGTKRCVHWHRS*ICSLAL
Trigger: AAGAGCTAAGGAGCAAATCCAAGATCTGTGCCAATG...CACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCATACTGCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp TCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCAACTGGGCTGGCAGATaGACTTACGGATTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SKEVQIWVCSSFNRDAVSNWAGR*TYGFLL
Trigger: GAGAAGAAATCCGTAAGTCCATCTGCCAGCCCAGTT...GGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp GGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCCTCATTAGATCTCTTTaGTGCTCACTCTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: GSKYTSICIIWVYPPRNSLIRSL*CSLSWS
Trigger: AGACCAAGAGAGTGAGCACCAAAGAGATCTAATGAG...GGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp GACAGATGCAGTAAACTCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAAAACTCAGCGCTGAAGTaGAGAAGATGCTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: DRCSKLKRGSDLGLFLFQNSALK*RRCWDP
Trigger: TGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTT...TTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTTTACTGCATCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CCA 90 bp CAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATCCATGTGGATTTGCTCTTaGGAGTTCAATGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QSIQVSASFGCTLPETPSMWICS*EFNVAG
Trigger: CCCTGCAACATTGAACTCCCAAGAGCAAATCCACAT...GGATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp ATTAAGGCGTGCTGCTGTGAGTTCTCCAAGGCACTTGGACAGGGAGCTGCATTTTTTAACCCTCATGAATaGGTAAGTGCCCTTATAAAA +
Preference number: 4 (lower is better)
Translates to: IKACCCEFSKALGQGAAFFNPHE*VSALIK
Trigger: TTTTATAAGGGCACTTACCCATTCATGAGGGTTAAA...AAATGCAGCTCCCTGTCCAAGTGCCTTGGAGAACTCACAGCAGCACGCCTTAAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp GTAAACTCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAAACGTTCAGCCCACTTaGAACTGTTTACCCCCATGG +
Preference number: 4 (lower is better)
Translates to: VNSKEVQIWVCSSFNRDANVQPT*NCLPPW
Trigger: CCATGGGGGTAAACAGTTCCAAGTGGGCTGAACGTT...TGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp GGGGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTGGCAGTCATGCATACTaGTGCAACTTCTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: GAQSIQVSASFGCTLPETGSHAY*CNFFDF
Trigger: AAAGTCAAAGAAGTTGCACCAGTATGCATGACTGCC...AGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp CAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTCATCCTTGGGAATACTaGTTTGCCTCAACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: QKRFRFGSVPLSIVMQFPHPWEY*FASTSQ
Trigger: CTGAGAAGTTGAGGCAAATCAGTATTCCCAAGGATG...AGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp AGACACTGTGGTTTCTTGCTTTTAACAAATTGGTGTACTCTTGCCCTCCTCCCAGAGGCTCTTGGGAGATaGTTAGGTCATCAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: RHCGFLLLTNWCTLALLPEALGR*LGHQSL
Trigger: TAAACTTTGATGACCTAATCATCTCCCAAGAGCCTC...TGGGAGGAGGGCAAGAGTACACCAATTTGTTAAAAGCAAGAAACCACAGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp CAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATCCTTCACCATGTGGGGATaGATCAAAAAGGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: QSIQVSASFGCTLPETPSFTMWG*IKKVHS
Trigger: AGAATGCACCTTTTTGATGCATCCCCACATGGTGAA...GGATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp AATCGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTAACTTGTTGTTCTCCTaGTCTGGATACGTTGTAATA +
Preference number: 4 (lower is better)
Translates to: NRDAVSLLASSPRAPFTVNLLFS*SGYVVI
Trigger: TATTACAACGTATCCAGACCAGGAGAACAACAAGTT...AACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp GAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGGGTTTCCGTCACAGGTCATaGCTGTACAGACCCAATTTC +
Preference number: 4 (lower is better)
Translates to: EVSQNLKVVVDKVPFKLGFRHRS*LYRPNF
Trigger: GAAATTGGGTCTGTACAGCCATGACCTGTGACGGAA...ACCCAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp TCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATCAGTATCTGCATCATTTaGGTGTACCCTCCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SKYTSICIIWVYPPRNSISICII*VYPPRN
Trigger: GTTTCTGGGAGGGTACACCCAAATGATGCAGATACT...GATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CCA 90 bp TGGGAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGAGCATATTGGTAGGCTaGGATATCCTAAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: WEVSQNLKVVVDKVPFKLSILVG*DILSPA
Trigger: AGCAGGGCTTAGGATATCCCAGCCTACCAATATGCT...CAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CAA 72 bp CAAGAGGAATGTGGATTTGCTCTTGGGAGTTCAATGTaGCAGGGTAGAGTAGTCTTGGATGATAACCATGTT +
Preference number: 4 (lower is better)
Translates to: QEECGFALGSSM*QGRVVLDDNHV
Trigger: AACATGGTTATCATCCAAGACTACTCTACCCTGCAACATTGAACTCCCAAGAGCAAATCCACATTCCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp GACAGATGCAGTAAACTCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAACATCAGACAGTTCAATaGGAGCATCAACACAGAGTC +
Preference number: 4 (lower is better)
Translates to: DRCSKLKRGSDLGLFLFQHQTVQ*EHQHRV
Trigger: GACTCTGTGTTGATGCTCTCATTGAACTGTCTGATG...TTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTTTACTGCATCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR TCA 90 bp GTCCCAGGAGAAACTCTTCAGTCCTTTTTAAGGCTCCTGAAACTCAAATCCACTGAAACTCTTGGAAGCTaGGTTTCCAATCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: VPGETLQSFLRLLKLKSTETLGS*VSNQHF
Trigger: AAAATGCTGATTGGAAACTCAGCTTCCAAGAGTTTC...AGTGGATTTGAGTTTCAGGAGCCTTAAAAAGGACTGAAGAGTTTCTCCTGGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp AACTCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTCAGCCTGCTGACAGATaGAGTAAACTCAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: NSKEVQIWVCSSFNRDAVQPADR*SKLKRG
Trigger: ACCTCTTTTGAGTTTACTGCATCTGTCAGCAGGCTG...AACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR GCA 90 bp TCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCCGAAGGCACAATGTTTaGAAGAATGTAGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: SKEVQIWVCSSFNRDAVSRRHNV*KNVGKW
Trigger: CCATTTCCCTACATTCTTGCAAACATTGTGCCTTCG...GGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp ACTAGCAGTATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGTTGTTCTCCTGGTCTaGATACGTTGTAATATTGAT +
Preference number: 4 (lower is better)
Translates to: TSSMAMYLEAVIGTKRCVVVLLV*IRCNID
Trigger: ATCAATATTACAACGTATCCAGACCAGGAGAACAAC...CACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCATACTGCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp AACTCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTGGTGCTCACTCTCTTaGTCTTTTCAGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: NSKEVQIWVCSSFNRDAVWCSLS*SFQLFP
Trigger: AGGAAACAGCTGAAAAGACCAAGAGAGTGAGCACCA...AACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp TATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGTGAAGAGACACTGTaGTTTCTTGCTTTTAACAAA +
Preference number: 4 (lower is better)
Translates to: YGYVSRGSYWDQEMRGCWSEETL*FLAFNK
Trigger: TTTGTTAAAAGCAAGAAACCACAGTGTCTCTTCACT...CCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp CTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATGTGGGAATGTTTCCATaGACACTGGATCTTAACAGA +
Preference number: 4 (lower is better)
Translates to: LKVYKYLHHLGVPSQKLHVGMFP*TLDLNR
Trigger: TCTGTTAAGATCCAGTGTCCATGGAAACATTCCCAC...ATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR TCA 90 bp AAAAGTTCGAAGGCACAATGTTTGCAAGAATGTAGGGAAATGGATATGCTCAGTCTAACTGTAAATGACTaGCCTCCCCAAGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: KSSKAQCLQECREMDMLSLTVND*PPQVTV
Trigger: AACTGTGACTTGGGGAGGTCAGTCATTTACAGTTAG...ACTGAGCATATCCATTTCCCTACATTCTTGCAAACATTGTGCCTTCGAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp CAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTCGGATTTCTTCTCTTTaGAGTGTCCATCGTAATCAA +
Preference number: 4 (lower is better)
Translates to: QKRFRFGSVPLSIVMQFPRISSL*SVHRNQ
Trigger: TTGATTACGATGGACACTGCAAAGAGAAGAAATCCG...AGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR GCA 90 bp AAAAGTTCGAAGGCACAATGTTTGCAAGAATGTAGGGAAATGGATATGCTCAGTCTTCCCATGTTTATTTaGCTTCTCACAGGCTACTGC +
Preference number: 4 (lower is better)
Translates to: KSSKAQCLQECREMDMLSLPMFI*LLTGYC
Trigger: GCAGTAGCCTGTGAGAAGGCAAATAAACATGGGAAG...ACTGAGCATATCCATTTCCCTACATTCTTGCAAACATTGTGCCTTCGAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp AAAAGTTCGAAGGCACAATGTTTGCAAGAATGTAGGGAAATGGATATGCTCAGTAGGAGGGTTGAAAGATaGGTTGAGGCACTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: KSSKAQCLQECREMDMLSRRVER*VEALEK
Trigger: TTTCTCAAGTGCCTCAACCCATCTTTCAACCCTCCT...ACTGAGCATATCCATTTCCCTACATTCTTGCAAACATTGTGCCTTCGAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp CTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATCAGTTTATGTACTTTTaGCAGTCATGCATACTGGTG +
Preference number: 4 (lower is better)
Translates to: LKVYKYLHHLGVPSQKLHQFMYF*QSCILV
Trigger: CACCAGTATGCATGACTGCCAAAAGTACATAAACTG...ATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp GAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGGGTTTCCCAATACAGGAATaGACCTGCTATGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: EVSQNLKVVVDKVPFKLGFPIQE*TCYGLN
Trigger: ATTCAAACCATAGCAGGTGCATTCCTGTATTGGGAA...ACCCAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp TCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCAACTTGTTGTTCTCCTaGTCTGGATACGTTGTAATA +
Preference number: 4 (lower is better)
Translates to: SKEVQIWVCSSFNRDAVSNLLFS*SGYVVI
Trigger: TATTACAACGTATCCAGACCAGGAGAACAACAAGTT...GGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CCA 90 bp GAAGTTAGCCAAAATTTAAAAGTGGTTGTGGACAAGGTACCCTTCAAACTGGGTCACTTGAGAAACTCTTaGAAGCTGAGTTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: EVSQNLKVVVDKVPFKLGHLRNS*KLSFQS
Trigger: TGATTGGAAACTCAGCTTCCAAGAGTTTCTCAAGTG...ACCCAGTTTGAAGGGTACCTTGTCCACAACCACTTTTAAATTTTGGCTAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp AACTCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTATGAAAATGGCAGGTTaGAAAGCGTTAGTCATGTGT +
Preference number: 4 (lower is better)
Translates to: NSKEVQIWVCSSFNRDAVMKMAG*KALVMC
Trigger: ACACATGACTAACGCTTTCCAACCTGCCATTTTCAT...AACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CAA 72 bp TTCCCAGCCTTCAGAACTGTGAGCAATACATTTCTGTaGCCTATAATTACCCAGTCTGAGGCATTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: FPAFRTVSNTFL*PIITQSEAFCY
Trigger: ATAACAAAATGCCTCAGACTGGGTAATTATAGGCAACAGAAATGTATTGCTCACAGTTCTGAAGGCTGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CAA 72 bp CTCTATCAGAGGCCAAAAAGTTCGAAGGCACAATGTTaGCAAGAATGTAGGGAAATGGATATGCTCAGTTTA +
Preference number: 4 (lower is better)
Translates to: LYQRPKSSKAQC*QECREMDMLSL
Trigger: TAAACTGAGCATATCCATTTCCCTACATTCTTGCAAACATTGTGCCTTCGAACTTTTTGGCCTCTGATAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CCA 90 bp AACTCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTGTTGTTCTCCTGGTCTaGATACGTTGTAATATTGAT +
Preference number: 4 (lower is better)
Translates to: NSKEVQIWVCSSFNRDAVVVLLV*IRCNID
Trigger: ATCAATATTACAACGTATCCAGACCAGGAGAACAAC...AACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
3UTR CAA 72 bp AATGTAGGGAAATGGATATGCTCAGTTTATGTACTTTaGGCAGTCATGCATACTGGTGCAACTTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: NVGKWICSVYVL*AVMHTGATSLT
Trigger: AGTCAAAGAAGTTGCACCAGTATGCATGACTGCCAAAAGTACATAAACTGAGCATATCCATTTCCCTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp GTAAACTCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAATACAGGAATGCACCTaGTATGGTTTGAATGTTTAT +
Preference number: 4 (lower is better)
Translates to: VNSKEVQIWVCSSFNRDAIQECT*YGLNVY
Trigger: ATAAACATTCAAACCATAGCAGGTGCATTCCTGTAT...TGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR GCA 90 bp AACTCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCATTGACTATAATATaGTCTTTTGGGAGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: NSKEVQIWVCSSFNRDAVSLTII*SFGRQN
Trigger: ATTCTGCCTCCCAAAAGAGCATATTATAGTCAATGA...AACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
3UTR CAA 72 bp AAGGAATTCTATTTTTGGCACAACAGTTTCTCACAGTaGCCTGTGCATTACAACCTAAATAATTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KEFYFWHNSFSQ*PVHYNLNNFLL
Trigger: CAGAAGGAAATTATTTAGGTTGTAATGCACAGGCAACTGTGAGAAACTGTTGTGCCAAAAATAGAATTCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp ATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTTGTGAGGTTTGCATaGCTCGGCGCGGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: MERGWKQRAFLSVELPKPLVRFA*LGADPG
Trigger: GCCTGGGTCCGCGCCGAGCAATGCAAACCTCACAAG...AGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424703.6
CDS GCA 90 bp GAGAACCTATGCTGGCTTCCCATCCTACTGCCTCTGCACAGGAGATaGTCCATGAGTACTTCAATCTCTTCCTCGGCGCGGACCCAGGCG +
Preference number: 5 (lower is better)
Translates to: ENLCWLPILLPLHRR*SMSTSISSSARTQA
Trigger: CGCCTGGGTCCGCGCCGAGGAAGAGATTGAAGTACTCATGGAGCATCTCCTGTGCAGAGGCAGTAGGATGGGAAGCCAGCATAGGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467994.1
CDS-3UTR CAA 90 bp AGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTGCTAGTCCCCTAAGCAACTaGTTGTTCTCCTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: RAFLSVELPKPLLRGHPASPLSN*LFSWSG
Trigger: TCCAGACCAGGAGAACAACAAGTTGCTTAGGGGACT...AGCAGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CAA 90 bp CAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTGGGTTGAAAGATGGGTaGAGGCACTTGAGAAACTCT +
Preference number: 5 (lower is better)
Translates to: QRAFLSVELPKPLLRGHPGLKDG*RHLRNS
Trigger: AGAGTTTCTCAAGTGCCTCAACCCATCTTTCAACCC...AGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CAA 90 bp CGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTGCTAAGTCAAATTGGTGTACTCTaGCCCTCCTCCCATAGTGTC +
Preference number: 5 (lower is better)
Translates to: RSSPWSFPNLSSGDTLLSQIGVL*PSSHSV
Trigger: GACACTATGGGAGGAGGGCAAGAGTACACCAATTTG...ACTTAGCAGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp CTCCTCCGGGGACACCCTGCTAAGTTCTCTCTGGCATCGTGTGCACTCCCTGCAGGGTTGAAAGATGGGTaGAGGCACTTGAGAAACTCT +
Preference number: 5 (lower is better)
Translates to: LLRGHPAKFSLASCALPAGLKDG*RHLRNS
Trigger: AGAGTTTCTCAAGTGCCTCAACCCATCTTTCAACCC...TGCAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAGGGTGTCCCCGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CAA 90 bp CGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTGCTAAGTGACTGTAGCAGACACTaGTGTATACTGAACTCAGCG +
Preference number: 5 (lower is better)
Translates to: RSSPWSFPNLSSGDTLLSDCSRH*CILNSA
Trigger: CGCTGAGTTCAGTATACACAAGTGTCTGCTACAGTC...ACTTAGCAGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS CCA 90 bp AGGTGGCTCCAACTCCGGTACTTGAGAGAGGTGCTTCTGTTCTCATaGTCCACAGTGACGAGTTGGAGAGTCTCCCCTGTGACATACCAC +
Preference number: 5 (lower is better)
Translates to: RWLQLRYLREVLLFS*STVTSWRVSPVTYH
Trigger: GTGGTATGTCACAGGGGAGACTCTCCAACTCGTCACTGTGGACCATGAGAACAGAAGCACCTCTCTCAAGTACCGGAGTTGGAGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485968.5
CDS-3UTR CAA 90 bp ATGCTGACGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCCCCTAAGCAACTTGTaGTTCTCCTGGTCTGGATAC +
Preference number: 5 (lower is better)
Translates to: MLTAMERGWKQRAFLSVEPLSNL*FSWSGY
Trigger: GTATCCAGACCAGGAGAACAACAAGTTGCTTAGGGG...CTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCGTCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CAA 90 bp AGAGCGTTCCTCTCCGTGGAGCTTCCCAAACCTCTCCTCCGGGGACACCCTGCTTTCTCACGACTTTATTaGGCCTTAATTGGGGGAAAG +
Preference number: 5 (lower is better)
Translates to: RAFLSVELPKPLLRGHPAFSRLY*ALIGGK
Trigger: CTTTCCCCCAATTAAGGCCAAATAAAGTCGTGAGAA...AGCAGGGTGTCCCCGGAGGAGAGGTTTGGGAAGCTCCACGGAGAGGAACGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS GCA 90 bp GCATTGCTCAATGCAGAGACAGGTGGGTTCCCCTTTCTCTGTGACTaGACATTCCCGGCCGGCTCCACAAAACACATTGGCACAGATCTT +
Preference number: 5 (lower is better)
Translates to: ALLNAETGGFPFLCD*TFPAGSTKHIGTDL
Trigger: AAGATCTGTGCCAATGTGTTTTGTGGAGCCGGCCGGGAATGTGCAGTCACAGAGAAAGGGGAACCCACCTGTCTCTGCATTGAGCAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000464690.5
ENST00000469005.1
CDS-3UTR CAA 90 bp AGCCCCTGCACCAGGAAGAACCCCAAACTCCTTCCACCTATGAAGTGGTGGGACGACTGTAGCAGACACTaGTGTATACTGAACTCAGCG +
Preference number: 5 (lower is better)
Translates to: SPCTRKNPKLLPPMKWWDDCSRH*CILNSA
Trigger: CGCTGAGTTCAGTATACACAAGTGTCTGCTACAGTC...GTCCCACCACTTCATAGGTGGAAGGAGTTTGGGGTTCTTCCTGGTGCAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp GACACCCTGCTAAGTTCTCTCTGGCATCGTGTGCACTCCCTGCAGCCTGCTGACAGTCGAATGAGCATATaGGTAGGCTGGGATATCCTA +
Preference number: 5 (lower is better)
Translates to: DTLLSSLWHRVHSLQPADSRMSI*VGWDIL
Trigger: TAGGATATCCCAGCCTACCAATATGCTCATTCGACT...GTCAGCAGGCTGCAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAGGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp CTCCTCCGGGGACACCCTGCTAAGTTCTCTCTGGCATCGTGTGCACTCCCTGCAAAGAGGAATGTGGATTaGCTCTTGGGAGTTCAATGT +
Preference number: 5 (lower is better)
Translates to: LLRGHPAKFSLASCALPAKRNVD*LLGVQC
Trigger: ACATTGAACTCCCAAGAGCAAATCCACATTCCTCTT...TGCAGGGAGTGCACACGATGCCAGAGAGAACTTAGCAGGGTGTCCCCGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp ATGGCTATGTATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGACTGGTCCACGTGGGCTaGTTAGCAGGCAGAGGAACC +
Preference number: 5 (lower is better)
Translates to: MAMYLEAVIGTKRCVDAGLVHVG*LAGRGT
Trigger: GGTTCCTCTGCCTGCTAACAAGCCCACGTGGACCAG...TCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATACATAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS GCA 90 bp TCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACTGGTCTGTaGCTCCTCATTAGATCTCTTTGGTGCTCACTTCTTCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SALKWRRCWDPDTGL*LLIRSLWCSLLLRR
Trigger: CCTCCTGAGAAGAAGTGAGCACCAAAGAGATCTAATGAGGAGGCACAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480823.1
CDS CCA 90 bp TACTTGAGAGAGGTGCTTCTGTTCTCATGGTCCACAGTGACGAGTTaGAGAGTCTCCCCTGTGACATACCACACCGCCTTCTCAACACAG +
Preference number: 5 (lower is better)
Translates to: YLREVLLFSWSTVTS*RVSPVTYHTAFSTQ
Trigger: CTGTGTTGAGAAGGCGGTGTGGTATGTCACAGGGGAGACTCTCCAACTCGTCACTGTGGACCATGAGAACAGAAGCACCTCTCTCAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485968.5
CDS-3UTR CAA 90 bp AGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGACGGCAGCACAGATCTTGGATTaGCTCCTTAGCTCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: SYWDQEMRGCWRSVMLTAAQILD*LLSSSS
Trigger: CGAGGAAGAGCTAAGGAGCAAATCCAAGATCTGTGC...TGCCGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp CGGCAATGGAAAGAGGCTGGAAGCAGAGAGCGTTCCTCTCCGTGGAGCTTCCCAAAAAAGGTGCATTCTTaGAAGCAGGCAAGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: RQWKEAGSRERSSPWSFPKKVHS*KQASFN
Trigger: GTTGAAGCTTGCCTGCTTCAAAGAATGCACCTTTTT...TGGGAAGCTCCACGGAGAGGAACGCTCTCTGCTTCCAGCCTCTTTCCATTGCCG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp TCCTCTTTCAATCGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCACCCCTAAGCAACTTGTaGTTCTCCTGGTCTGGATAC +
Preference number: 5 (lower is better)
Translates to: SSFNRDAVSLLASSPRAPPLSNL*FSWSGY
Trigger: GTATCCAGACCAGGAGAACAACAAGTTGCTTAGGGG...TGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACGATTGAAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CAA 90 bp AGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGAGCAGTAGGCCAGAGTaGTTTTCATGTCCCATATCC +
Preference number: 5 (lower is better)
Translates to: RGSYWDQEMRGCWRSVMLSSRPE*FSCPIS
Trigger: GGATATGGGACATGAAAACAACTCTGGCCTACTGCT...CAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS TCA 90 bp CAAGAAGAACCAAAGCTCAGAGCAGTAGCAGCTGTGGTAAGCCAGTaGGGAATCCGCCAAGATCTACCTAGAGGCTCTCAATTCATCTCC +
Preference number: 5 (lower is better)
Translates to: QEEPKLRAVAAVVSQ*GIRQDLPRGSQFIS
Trigger: GGAGATGAATTGAGAGCCTCTAGGTAGATCTTGGCGGATTCCTCACTGGCTTACCACAGCTGCTACTGCTCTGAGCTTTGGTTCTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488318.1
CDS GCA 90 bp TCCCAGTTATTTCCATTCACTCACTCTACCTTTAGGGAGAACCTATaGTGGCTTCCCATCCTACTGCCTCTGCACAGGAGATGCTCCATG +
Preference number: 5 (lower is better)
Translates to: SQLFPFTHSTFRENL*WLPILLPLHRRCSM
Trigger: CATGGAGCATCTCCTGTGCAGAGGCAGTAGGATGGGAAGCCAGCATAGGTTCTCCCTAAAGGTAGAGTGAGTGAATGGAAATAACTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467994.1
CDS-3UTR CAA 90 bp TATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATTCTTCTCAGGAGGGTaGAAAGATGGGTTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: YLEAVIGTKRCVDAGGLSFFSGG*KDGLRH
Trigger: GTGCCTCAACCCATCTTTCAACCCTCCTGAGAAGAA...TGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CAA 90 bp AGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGACGGCAAAGTATCTGCATCATTaGGGTGTACCCTCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: SYWDQEMRGCWRSVMLTAKYLHH*GVPSQK
Trigger: TTTCTGGGAGGGTACACCCAAATGATGCAGATACTT...TGCCGTCAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CAA 90 bp CAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATCCCCTGCTTGGCTGCCCTaGTCGCCATCCTTGGGAATA +
Preference number: 5 (lower is better)
Translates to: QSIQVSASFGCTLPETPSPAWLP*SPSLGI
Trigger: TATTCCCAAGGATGGCGACAAGGGCAGCCAAGCAGG...GGATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS TCA 90 bp AACTGTATACCACCTGCATCATCCTTTATTATGAACAACAGAATGTaGAGGCCAGTGAGGGCTACGTCGAAGCCCTGCTCTGGACAGCTG +
Preference number: 5 (lower is better)
Translates to: NCIPPASSFIMNNRM*RPVRATSKPCSGQL
Trigger: CAGCTGTCCAGAGCAGGGCTTCGACGTAGCCCTCACTGGCCTTCACATTCTGTTGTTCATAATAAAGGATGATGCAGGTGGTATACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464690.5
CDS CCA 90 bp CGTTTCATCCTCCAGGGCACACTTCTTCTCAGGAGGGTTGAAAGATaGGTTGAGGCACTTGAGAAACTCTTGGAAGCTGAGTTTCCAATC +
Preference number: 5 (lower is better)
Translates to: RFILQGTLLLRRVER*VEALEKLLEAEFPI
Trigger: GATTGGAAACTCAGCTTCCAAGAGTTTCTCAAGTGCCTCAACCCATCTTTCAACCCTCCTGAGAAGAAGTGTGCCCTGGAGGATGAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS CCA 90 bp CAGTTATTTCCATTCACTCACTCTACCTTTAGGGAGAACCTATGCTaGCTTCCCATCCTACTGCCTCTGCACAGGAGATGCTCCATGAGT +
Preference number: 5 (lower is better)
Translates to: QLFPFTHSTFRENLC*LPILLPLHRRCSMS
Trigger: ACTCATGGAGCATCTCCTGTGCAGAGGCAGTAGGATGGGAAGCCAGCATAGGTTCTCCCTAAAGGTAGAGTGAGTGAATGGAAATAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467994.1
CDS-3UTR CAA 90 bp AGCCCCTGCACCAGGAAGAACCCCAAACTCCTTCCACCTATGAAGTGGTGGGACGGATACGTTGTAATATaGATGGCAGTTTCATTCTGT +
Preference number: 5 (lower is better)
Translates to: SPCTRKNPKLLPPMKWWDGYVVI*MAVSFC
Trigger: ACAGAATGAAACTGCCATCAATATTACAACGTATCC...GTCCCACCACTTCATAGGTGGAAGGAGTTTGGGGTTCTTCCTGGTGCAGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp TGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACTGGTGCAAATACTGGTGATTaGGCGACTGTAGCAGACACT +
Preference number: 5 (lower is better)
Translates to: CILNSALKWRRCWDPDTGANTGD*ATVADT
Trigger: AGTGTCTGCTACAGTCGCCAAATCACCAGTATTTGC...ACCAGTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CAA 90 bp AGCCCCTGCACCAGGAAGAACCCCAAACTCCTTCCACCTATGAAGTGGTGGGACAGCAATACATTTCTGTaGCCTATAATTACCCAGTCT +
Preference number: 5 (lower is better)
Translates to: SPCTRKNPKLLPPMKWWDSNTFL*PIITQS
Trigger: AGACTGGGTAATTATAGGCAACAGAAATGTATTGCT...GTCCCACCACTTCATAGGTGGAAGGAGTTTGGGGTTCTTCCTGGTGCAGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp ACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTAGAATCTGCTGGTACCTaGATCTTAGGCTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: TVSLKALLEMKAVALPFLESAGT*ILGFPA
Trigger: GGCTGGGAAGCCTAAGATCAAGGTACCAGCAGATTC...TAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS TCA 90 bp TGGCCTCATACCTCCTCCTGTTGCATTGAGGGGTCACTGGGATTTTaGGAATTCAAATGGAGAATCATTCTGGACAGGGAATGGAGTGGA +
Preference number: 5 (lower is better)
Translates to: WPHTSSCCIEGSLGF*EFKWRIILDREWSG
Trigger: TCCACTCCATTCCCTGTCCAGAATGATTCTCCATTTGAATTCTCAAAATCCCAGTGACCCCTCAATGCAACAGGAGGAGGTATGAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468098.1
CDS GCA 90 bp TGGGATCCAGACACTGGTCTGTGCCTCCTCATTAGATCTCTTTGGTaGTCACTCTCTTGGTCTTTTCAGCTGTTTCCTGATGCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: WDPDTGLCLLIRSLW*SLSWSFQLFPDAFG
Trigger: TCCAAAAGCATCAGGAAACAGCTGAAAAGACCAAGAGAGTGAGCACCAAAGAGATCTAATGAGGAGGCACAGACCAGTGTCTGGATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000488318.1
CDS CCA 90 bp TGCTGGGATCCAGACACTGGTCTGTGCCTCCTCATTAGATCTCTTTaGTGCTCACTCTCTTGGTCTTTTCAGCTGTTTCCTGATGCTTTT +
Preference number: 5 (lower is better)
Translates to: CWDPDTGLCLLIRSL*CSLSWSFQLFPDAF
Trigger: AAAAGCATCAGGAAACAGCTGAAAAGACCAAGAGAGTGAGCACCAAAGAGATCTAATGAGGAGGCACAGACCAGTGTCTGGATCCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000488318.1
CDS-3UTR CAA 90 bp CGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTTCTGCTCCACAAAACACATaGGCACAGATCTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: RDAVSLLASSPRAPFTVSAPQNT*AQILDL
Trigger: CAAATCCAAGATCTGTGCCAATGTGTTTTGTGGAGC...AGAAACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp ACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTATTCTTCTCAGGAGGGTaGAAAGATGGGTTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: TVSLKALLEMKAVALPFLFFSGG*KDGLRH
Trigger: GTGCCTCAACCCATCTTTCAACCCTCCTGAGAAGAA...TAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CAA 90 bp CGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTTCTTGTTTCCTGATGCTTTaGGAGCTCCTGGACATATCT +
Preference number: 5 (lower is better)
Translates to: RDAVSLLASSPRAPFTVSCFLML*ELLDIS
Trigger: AGATATGTCCAGGAGCTCCAAAAGCATCAGGAAACA...AGAAACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CAA 90 bp CTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACAAGTATCTGCATCATTaGGGTGTACCCTCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: LVYTELSAEVEKMLGSRHKYLHH*GVPSQK
Trigger: TTTCTGGGAGGGTACACCCAAATGATGCAGATACTT...GTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CAA 90 bp AGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCATGCTGCTTGGGAATACTGATTaGCCTCAACTTCTCAGAATA +
Preference number: 5 (lower is better)
Translates to: RGSYWDQEMRGCWRSVMLLGNTD*PQLLRI
Trigger: TATTCTGAGAAGTTGAGGCAAATCAGTATTCCCAAG...CAGCATGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp GGGGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTGGGCTGGTAAAACCTTaGATTAAGGCGTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: GAQSIQVSASFGCTLPETGLVKP*IKACCC
Trigger: ACAGCAGCACGCCTTAATCAAAGGTTTTACCAGCCC...AGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp CTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACAATGTGGATTTGCTCTaGGGAGTTCAATGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: LVYTELSAEVEKMLGSRHNVDLL*GVQCCR
Trigger: CCTGCAACATTGAACTCCCAAGAGCAAATCCACATT...GTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp TATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATCCAAGTCCCCAAAGCAATGGTATaGAGAGGTGAGGCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: YTSICIIWVYPPRNSIQVPKAMV*RGEALG
Trigger: CCCAAGAGCCTCACCTCTCAATACCATTGCTTTGGG...GACTTGGATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp AATCGTGATGCAGTTTCCTTACTAGCCTCCAGCCCCAGAGCACCATTTACAGTTCCTTCCCATGTTTATTaGCCTTCTCACAGGCTACTG +
Preference number: 5 (lower is better)
Translates to: NRDAVSLLASSPRAPFTVPSHVY*PSHRLL
Trigger: CAGTAGCCTGTGAGAAGGCAAATAAACATGGGAAGG...AACTGTAAATGGTGCTCTGGGGCTGGAGGCTAGTAAGGAAACTGCATCACGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS CCA 90 bp TACCCTTCTGGCCTCATACCTCCTCCTGTTGCATTGAGGGGTCACTaGGATTTTGAGAATTCAAATGGAGAATCATTCTGGACAGGGAAT +
Preference number: 5 (lower is better)
Translates to: YPSGLIPPPVALRGH*DFENSNGESFWTGN
Trigger: ATTCCCTGTCCAGAATGATTCTCCATTTGAATTCTCAAAATCCCAGTGACCCCTCAATGCAACAGGAGGAGGTATGAGGCCAGAAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468098.1
CDS-3UTR CAA 90 bp ACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTACTTGTGAGGTTTGCATaGCTCAATGCAGAGACAGGT +
Preference number: 5 (lower is better)
Translates to: TVSLKALLEMKAVALPFLLVRFA*LNAETG
Trigger: ACCTGTCTCTGCATTGAGCAATGCAAACCTCACAAG...TAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp TTTACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCAGTCCCCTAAGCAACTaGTTGTTCTCCTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: FTVSLKALLEMKAVALPFSPLSN*LFSWSG
Trigger: TCCAGACCAGGAGAACAACAAGTTGCTTAGGGGACT...GAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CAA 90 bp GGGGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTGGGTTGAAAGATGGGTaGAGGCACTTGAGAAACTCT +
Preference number: 5 (lower is better)
Translates to: GAQSIQVSASFGCTLPETGLKDG*RHLRNS
Trigger: AGAGTTTCTCAAGTGCCTCAACCCATCTTTCAACCC...AGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CAA 90 bp ACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTAGACTGTAGCAGACACTaGTGTATACTGAACTCAGCG +
Preference number: 5 (lower is better)
Translates to: TVSLKALLEMKAVALPFLDCSRH*CILNSA
Trigger: CGCTGAGTTCAGTATACACAAGTGTCTGCTACAGTC...TAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CAA 90 bp GGGGCTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTGCAAATACTGGTGATTaGGCGACTGTAGCAGACACT +
Preference number: 5 (lower is better)
Translates to: GAQSIQVSASFGCTLPETANTGD*ATVADT
Trigger: AGTGTCTGCTACAGTCGCCAAATCACCAGTATTTGC...AGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CAA 90 bp GTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTAGCCCAGGGTAGAGTAGTCTaGGATGATAACCATGTTCTA +
Preference number: 5 (lower is better)
Translates to: VSLKALLEMKAVALPFLAQGRVV*DDNHVL
Trigger: TAGAACATGGTTATCATCCAAGACTACTCTACCCTG...GGCTAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp TATCTAGAGGCAGTTATTGGGACCAAGAGATGCGTGGATGCTGGAGGTCTGTCAAAGACACTTTCTGACTaGTCATCACCTTCTACTCCA +
Preference number: 5 (lower is better)
Translates to: YLEAVIGTKRCVDAGGLSKTLSD*SSPSTP
Trigger: TGGAGTAGAAGGTGATGACAAGTCAGAAAGTGTCTT...TGACAGACCTCCAGCATCCACGCATCTCTTGGTCCCAATAACTGCCTCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp CTTGTGTATACTGAACTCAGCGCTGAAGTGGAGAAGATGCTGGGATCCAGACACTCGAAGGCACAATGTTaGCAAGAATGTAGGGAAATG +
Preference number: 5 (lower is better)
Translates to: LVYTELSAEVEKMLGSRHSKAQC*QECREM
Trigger: CATTTCCCTACATTCTTGCAAACATTGTGCCTTCGA...GTGTCTGGATCCCAGCATCTTCTCCACTTCAGCGCTGAGTTCAGTATACACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS CCA 90 bp TTGAGGGGTCACTGGGATTTTGAGAATTCAAATGGAGAATCATTCTaGACAGGGAATGGAGTGGAGACAATCACCTGGGAAACAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LRGHWDFENSNGESF*TGNGVETITWETAS
Trigger: AGAAGCTGTTTCCCAGGTGATTGTCTCCACTCCATTCCCTGTCCAGAATGATTCTCCATTTGAATTCTCAAAATCCCAGTGACCCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468098.1
CDS-3UTR CAA 90 bp CAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTTTCTTCTCAGGAGGGTaGAAAGATGGGTTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: QKRFRFGSVPLSIVMQFPFFSGG*KDGLRH
Trigger: GTGCCTCAACCCATCTTTCAACCCTCCTGAGAAGAA...AGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CAA 90 bp CAGCCTGCTGACAGATGCAGTAAACTCAAAAGAGGTTCAGATTTGGGTCTGTTCTGTTTCCTGATGCTTTaGGAGCTCCTGGACATATCT +
Preference number: 5 (lower is better)
Translates to: QPADRCSKLKRGSDLGLFCFLML*ELLDIS
Trigger: AGATATGTCCAGGAGCTCCAAAAGCATCAGGAAACA...GAACAGACCCAAATCTGAACCTCTTTTGAGTTTACTGCATCTGTCAGCAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CAA 90 bp ACAGTTTCTCTTAAAGCACTCCTAGAAATGAAGGCTGTGGCCCTTCCCTTCCTATCCTTTCAAAGAAACTaGTTCTACCAGTCCCCGAGT +
Preference number: 5 (lower is better)
Translates to: TVSLKALLEMKAVALPFLSFQRN*FYQSPS
Trigger: ACTCGGGGACTGGTAGAACAAGTTTCTTTGAAAGGA...TAGGAAGGGAAGGGCCACAGCCTTCATTTCTAGGAGTGCTTTAAGAGAAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS TCA 90 bp GTGATTCCTTTCTGTAGAGTAAACAGCATTTGGGATTCCTGGGCATaGAGACTGTTCAGGTGCCACATGCCGTACTGTTTATATTCCACT +
Preference number: 5 (lower is better)
Translates to: VIPFCRVNSIWDSWA*RLFRCHMPYCLYST
Trigger: AGTGGAATATAAACAGTACGGCATGTGGCACCTGAACAGTCTTCATGCCCAGGAATCCCAAATGCTGTTTACTCTACAGAAAGGAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467994.1
CDS TCA 90 bp AATTTTGGCTCTACTTGCCACTATTCTGCGACAGAGTGGCTTTGTTaGCGTGAGAAAGGCTCTCTTTGCTTTGCCAGAATTAGTCATGGA +
Preference number: 5 (lower is better)
Translates to: NFGSTCHYSATEWLC*REKGSLCFARISHG
Trigger: TCCATGACTAATTCTGGCAAAGCAAAGAGAGCCTTTCTCACGTCAACAAAGCCACTCTGTCGCAGAATAGTGGCAAGTAGAGCCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472536.5
CDS CCA 90 bp AGCATCAACACAGAGTCCCCTAAGCAACTTGTTGTTCTCCTGGTCTaGATACGTTGTAATATTGATGGCAGTTTCATTCTGTTCCACAAA +
Preference number: 5 (lower is better)
Translates to: SINTESPKQLVVLLV*IRCNIDGSFILFHK
Trigger: TTTGTGGAACAGAATGAAACTGCCATCAATATTACAACGTATCCAGACCAGGAGAACAACAAGTTGCTTAGGGGACTCTGTGTTGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS TCA 90 bp GTTCAATCACTACTCAGGAAAAATGGGAAAACACAGCCAACATTCTaGCCCAACCAGCTGCTTCAATTGGCAAACACATACACAAATGTA +
Preference number: 5 (lower is better)
Translates to: VQSLLRKNGKTQPTF*PNQLLQLANTYTNV
Trigger: TACATTTGTGTATGTGTTTGCCAATTGAAGCAGCTGGTTGGGTCAGAATGTTGGCTGTGTTTTCCCATTTTTCCTGAGTAGTGATTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464690.5
CDS TCA 90 bp GAGAGTATAAATCCTCCAGTCTTCTTCAGTAATGGCCAAGGAAAATaGTTTAAACCCATCAAAATGCTATTTGATGAATGCCTCGGCGCG +
Preference number: 5 (lower is better)
Translates to: ESINPPVFFSNGQGK*FKPIKMLFDECLGA
Trigger: CGCGCCGAGGCATTCATCAAATAGCATTTTGATGGGTTTAAATCATTTTCCTTGGCCATTACTGAAGAAGACTGGAGGATTTATACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485968.5
CDS-3UTR CAA 90 bp CAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTCCTAAAAGAGGTTCAGATTaGGGTCTGTTCCTCTTTCAA +
Preference number: 5 (lower is better)
Translates to: QKRFRFGSVPLSIVMQFPKRGSD*GLFLFQ
Trigger: TTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTT...AGGAAACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000480823.1
CDS-3UTR CAA 90 bp CTCAAAGTATACAAGTATCTGCATCATTTGGGTGTACCCTCCCAGAAACTCCATAAAAGAGGTTCAGATTaGGGTCTGTTCCTCTTTCAA +
Preference number: 5 (lower is better)
Translates to: LKVYKYLHHLGVPSQKLHKRGSD*GLFLFQ
Trigger: TTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTT...ATGGAGTTTCTGGGAGGGTACACCCAAATGATGCAGATACTTGTATACTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000480823.1
CDS-3UTR CAA 90 bp AACTCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTTATGAAAATGGCAGGTaGGAAAGCGTTAGTCATGTG +
Preference number: 5 (lower is better)
Translates to: NSKEVQIWVCSSFNRDAVYENGR*ESVSHV
Trigger: CACATGACTAACGCTTTCCAACCTGCCATTTTCATA...AACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS-3UTR CAA 90 bp AACTCAAAAGAGGTTCAGATTTGGGTCTGTTCCTCTTTCAATCGTGATGCAGTTGGATACGTTGTAATATaGATGGCAGTTTCATTCTGT +
Preference number: 5 (lower is better)
Translates to: NSKEVQIWVCSSFNRDAVGYVVI*MAVSFC
Trigger: ACAGAATGAAACTGCCATCAATATTACAACGTATCC...AACTGCATCACGATTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTTGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS-3UTR CAA 90 bp AAAAGTTCGAAGGCACAATGTTTGCAAGAATGTAGGGAAATGGATATGCTCAGTAAAAGAGGTTCAGATTaGGGTCTGTTCCTCTTTCAA +
Preference number: 5 (lower is better)
Translates to: KSSKAQCLQECREMDMLSKRGSD*GLFLFQ
Trigger: TTGAAAGAGGAACAGACCCAAATCTGAACCTCTTTT...ACTGAGCATATCCATTTCCCTACATTCTTGCAAACATTGTGCCTTCGAACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295633.8
CDS TCA 90 bp GGAAAGTCCAAGTGGAAGTTTCTAATACAGACCATTTATCTGCCCTaGATTAGCTTGTTAGGTTTGAATATGGTTCTTATTTTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GKSKWKFLIQTIYLP*ISLLGLNMVLIFSS
Trigger: AGAGGAGAAAATAAGAACCATATTCAAACCTAACAAGCTAATTCAGGGCAGATAAATGGTCTGTATTAGAAACTTCCACTTGGACTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485968.5
CDS GCA 72 bp TGCTGGCTTCCCATCCTACTGCCTCTGCACAGGAGATaGTCCATGAGTACTTCAATCTCTTCCTCGGCGCGG +
Preference number: 6 (lower is better)
Translates to: CWLPILLPLHRR*SMSTSISSSAR
Trigger: CCGCGCCGAGGAAGAGATTGAAGTACTCATGGAGCATCTCCTGTGCAGAGGCAGTAGGATGGGAAGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467994.1
CDS CAA 90 bp CCTTTCTCTGTGACTGCACATTCCCGGCCGGCTCCACAAAACACATaGGCACAGATCTTGGATTTGCTCCTTAGCTCTTCCTCGGCGCGG +
Preference number: 6 (lower is better)
Translates to: PFSVTAHSRPAPQNT*AQILDLLLSSSSAR
Trigger: CCGCGCCGAGGAAGAGCTAAGGAGCAAATCCAAGATCTGTGCCAATGTGTTTTGTGGAGCCGGCCGGGAATGTGCAGTCACAGAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000464690.5
ENST00000469005.1
CDS CCA 72 bp GAGGTGCTTCTGTTCTCATGGTCCACAGTGACGAGTTaGAGAGTCTCCCCTGTGACATACCACACCGCCTTC +
Preference number: 6 (lower is better)
Translates to: EVLLFSWSTVTS*RVSPVTYHTAF
Trigger: GAAGGCGGTGTGGTATGTCACAGGGGAGACTCTCCAACTCGTCACTGTGGACCATGAGAACAGAAGCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485968.5
CDS CCA 72 bp CAACTCCGGTACTTGAGAGAGGTGCTTCTGTTCTCATaGTCCACAGTGACGAGTTGGAGAGTCTCCCCTGTG +
Preference number: 6 (lower is better)
Translates to: QLRYLREVLLFS*STVTSWRVSPV
Trigger: CACAGGGGAGACTCTCCAACTCGTCACTGTGGACCATGAGAACAGAAGCACCTCTCTCAAGTACCGGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485968.5
CDS CAA 72 bp AGAGGTGCTTCTGTTCTCATGGTCCACAGTGACGAGTaGGAGAGTCTCCCCTGTGACATACCACACCGCCTT +
Preference number: 6 (lower is better)
Translates to: RGASVLMVHSDE*ESLPCDIPHRL
Trigger: AAGGCGGTGTGGTATGTCACAGGGGAGACTCTCCAACTCGTCACTGTGGACCATGAGAACAGAAGCACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485968.5
CDS CAA 90 bp ATGACTGAGGTAAGAGTCAGACCCAGGTGGCTCCAACTCCGGTACTaGAGAGAGGTGCTTCTGTTCTCATGGTCCACAGTGACGAGTTGG +
Preference number: 6 (lower is better)
Translates to: MTEVRVRPRWLQLRY*REVLLFSWSTVTSW
Trigger: CCAACTCGTCACTGTGGACCATGAGAACAGAAGCACCTCTCTCAAGTACCGGAGTTGGAGCCACCTGGGTCTGACTCTTACCTCAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485968.5
CDS TCA 72 bp CCAAAGCTCAGAGCAGTAGCAGCTGTGGTAAGCCAGTaGGGAATCCGCCAAGATCTACCTAGAGGCTCTCAA +
Preference number: 6 (lower is better)
Translates to: PKLRAVAAVVSQ*GIRQDLPRGSQ
Trigger: TTGAGAGCCTCTAGGTAGATCTTGGCGGATTCCTCACTGGCTTACCACAGCTGCTACTGCTCTGAGCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488318.1
CDS CCA 72 bp CCATTCACTCACTCTACCTTTAGGGAGAACCTATGCTaGCTTCCCATCCTACTGCCTCTGCACAGGAGATGC +
Preference number: 6 (lower is better)
Translates to: PFTHSTFRENLC*LPILLPLHRRC
Trigger: GCATCTCCTGTGCAGAGGCAGTAGGATGGGAAGCCAGCATAGGTTCTCCCTAAAGGTAGAGTGAGTGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467994.1
CDS CCA 72 bp CAGGGCCCCTCAGATATACACAGAATACCATGGAGCTaGGGACAAAGGAATTCACAGAACTGGGGAGAGCAG +
Preference number: 6 (lower is better)
Translates to: QGPSDIHRIPWS*GQRNSQNWGEQ
Trigger: CTGCTCTCCCCAGTTCTGTGAATTCCTTTGTCCCCAGCTCCATGGTATTCTGTGTATATCTGAGGGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472536.5
CDS CAA 90 bp GTACTTGAGAGAGGTGCTTCTGTTCTCATGGTCCACAGTGACGAGTaGGAGAGTCTCCCCTGTGACATACCACACCGCCTTCTCAACACA +
Preference number: 6 (lower is better)
Translates to: VLERGASVLMVHSDE*ESLPCDIPHRLLNT
Trigger: TGTGTTGAGAAGGCGGTGTGGTATGTCACAGGGGAGACTCTCCAACTCGTCACTGTGGACCATGAGAACAGAAGCACCTCTCTCAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485968.5
CDS CAA 90 bp CTGCGACAGAGTGGCTTTGTTGACGTGAGAAAGGCTCTCTTTGCTTaGCCAGAATTAGTCATGGAAACTTCACAGGAACACCAGGGCCCC +
Preference number: 6 (lower is better)
Translates to: LRQSGFVDVRKALFA*PELVMETSQEHQGP
Trigger: GGGGCCCTGGTGTTCCTGTGAAGTTTCCATGACTAATTCTGGCAAAGCAAAGAGAGCCTTTCTCACGTCAACAAAGCCACTCTGTCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472536.5
CDS CCA 72 bp CTCCAGGGCACACTTCTTCTCAGGAGGGTTGAAAGATaGGTTGAGGCACTTGAGAAACTCTTGGAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: LQGTLLLRRVER*VEALEKLLEAE
Trigger: CTCAGCTTCCAAGAGTTTCTCAAGTGCCTCAACCCATCTTTCAACCCTCCTGAGAAGAAGTGTGCCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS TCA 72 bp CCACCTGCATCATCCTTTATTATGAACAACAGAATGTaGAGGCCAGTGAGGGCTACGTCGAAGCCCTGCTCT +
Preference number: 6 (lower is better)
Translates to: PPASSFIMNNRM*RPVRATSKPCS
Trigger: AGAGCAGGGCTTCGACGTAGCCCTCACTGGCCTTCACATTCTGTTGTTCATAATAAAGGATGATGCAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464690.5
CDS CAA 90 bp TCATCCTCCAGGGCACACTTCTTCTCAGGAGGGTTGAAAGATGGGTaGAGGCACTTGAGAAACTCTTGGAAGCTGAGTTTCCAATCAGCA +
Preference number: 6 (lower is better)
Translates to: SSSRAHFFSGGLKDG*RHLRNSWKLSFQSA
Trigger: TGCTGATTGGAAACTCAGCTTCCAAGAGTTTCTCAAGTGCCTCAACCCATCTTTCAACCCTCCTGAGAAGAAGTGTGCCCTGGAGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS CAA 90 bp TTCCTTCTTCTAGGGCCCAGGTATGAGGATCTTCTGTCTCCTGCTTaGTCTGACAATTTAGGGCCACTGAGTTACCCTTCTGGCCTCATA +
Preference number: 6 (lower is better)
Translates to: FLLLGPRYEDLLSPA*SDNLGPLSYPSGLI
Trigger: TATGAGGCCAGAAGGGTAACTCAGTGGCCCTAAATTGTCAGACAAAGCAGGAGACAGAAGATCCTCATACCTGGGCCCTAGAAGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468098.1
CDS GCA 72 bp AAGTGGAGAAGATGCTGGGATCCAGACACTGGTCTGTaGCTCCTCATTAGATCTCTTTGGTGCTCACTTCTT +
Preference number: 6 (lower is better)
Translates to: KWRRCWDPDTGL*LLIRSLWCSLL
Trigger: AAGAAGTGAGCACCAAAGAGATCTAATGAGGAGGCACAGACCAGTGTCTGGATCCCAGCATCTTCTCCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480823.1
CDS CCA 72 bp CCAGACACTGGTCTGTGCCTCCTCATTAGATCTCTTTaGTGCTCACTCTCTTGGTCTTTTCAGCTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: PDTGLCLLIRSL*CSLSWSFQLFP
Trigger: AGGAAACAGCTGAAAAGACCAAGAGAGTGAGCACCAAAGAGATCTAATGAGGAGGCACAGACCAGTGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000488318.1
CDS GCA 72 bp GACACTGGTCTGTGCCTCCTCATTAGATCTCTTTGGTaGTCACTCTCTTGGTCTTTTCAGCTGTTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: DTGLCLLIRSLW*SLSWSFQLFPD
Trigger: ATCAGGAAACAGCTGAAAAGACCAAGAGAGTGAGCACCAAAGAGATCTAATGAGGAGGCACAGACCAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295633.8
ENST00000424703.6
ENST00000488318.1
CDS CAA 72 bp AGCTCTACTTATGCCAAGGTGGAATTTTGGCTCTACTaGCCACTATTCTGCGACAGAGTGGCTTTGTTGACG +
Preference number: 6 (lower is better)
Translates to: SSTYAKVEFWLY*PLFCDRVALLT
Trigger: CGTCAACAAAGCCACTCTGTCGCAGAATAGTGGCAAGTAGAGCCAAAATTCCACCTTGGCATAAGTAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472536.5
CDS CAA 90 bp AGGGCACACTTCTTCTCAGGAGGGTTGAAAGATGGGTTGAGGCACTaGAGAAACTCTTGGAAGCTGAGTTTCCAATCAGCATTTTCATCA +
Preference number: 6 (lower is better)
Translates to: RAHFFSGGLKDGLRH*RNSWKLSFQSAFSS
Trigger: TGATGAAAATGCTGATTGGAAACTCAGCTTCCAAGAGTTTCTCAAGTGCCTCAACCCATCTTTCAACCCTCCTGAGAAGAAGTGTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS TCA 72 bp ACCTCCTCCTGTTGCATTGAGGGGTCACTGGGATTTTaGGAATTCAAATGGAGAATCATTCTGGACAGGGAA +
Preference number: 6 (lower is better)
Translates to: TSSCCIEGSLGF*EFKWRIILDRE
Trigger: TTCCCTGTCCAGAATGATTCTCCATTTGAATTCTCAAAATCCCAGTGACCCCTCAATGCAACAGGAGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468098.1
CDS CAA 72 bp TTACTGGCATTTCCAGTTATCCCCTTTCAAAAAGAGTaGTGCCTTCTATTTGCTGGTCCCATGACACGAGCA +
Preference number: 6 (lower is better)
Translates to: LLAFPVIPFQKE*CLLFAGPMTRA
Trigger: TGCTCGTGTCATGGGACCAGCAAATAGAAGGCACAACTCTTTTTGAAAGGGGATAACTGGAAATGCCAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464690.5
CDS CAA 72 bp AGTGGCTTTGTTGACGTGAGAAAGGCTCTCTTTGCTTaGCCAGAATTAGTCATGGAAACTTCACAGGAACAC +
Preference number: 6 (lower is better)
Translates to: SGFVDVRKALFA*PELVMETSQEH
Trigger: GTGTTCCTGTGAAGTTTCCATGACTAATTCTGGCAAAGCAAAGAGAGCCTTTCTCACGTCAACAAAGCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472536.5
CDS CAA 90 bp CTTCTCAGGAGGGTTGAAAGATGGGTTGAGGCACTTGAGAAACTCTaGGAAGCTGAGTTTCCAATCAGCATTTTCATCAGACAGTTCAAT +
Preference number: 6 (lower is better)
Translates to: LLRRVERWVEALEKL*EAEFPISIFIRQFN
Trigger: ATTGAACTGTCTGATGAAAATGCTGATTGGAAACTCAGCTTCCAAGAGTTTCTCAAGTGCCTCAACCCATCTTTCAACCCTCCTGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS GCA 72 bp AGTTATCCCCTTTCAAAAAGAGTTGTGCCTTCTATTTaGTGGTCCCATGACACGAGCATGTCTTATAGGATG +
Preference number: 6 (lower is better)
Translates to: SYPLSKRVVPSI*WSHDTSMSYRM
Trigger: CATCCTATAAGACATGCTCGTGTCATGGGACCAGCAAATAGAAGGCACAACTCTTTTTGAAAGGGGATAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464690.5
CDS CCA 72 bp ACAGAGTCCCCTAAGCAACTTGTTGTTCTCCTGGTCTaGATACGTTGTAATATTGATGGCAGTTTCATTCTG +
Preference number: 6 (lower is better)
Translates to: TESPKQLVVLLV*IRCNIDGSFIL
Trigger: CAGAATGAAACTGCCATCAATATTACAACGTATCCAGACCAGGAGAACAACAAGTTGCTTAGGGGACTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS CCA 72 bp TCAACACAGAGTCCCCTAAGCAACTTGTTGTTCTCCTaGTCTGGATACGTTGTAATATTGATGGCAGTTTCA +
Preference number: 6 (lower is better)
Translates to: STQSPLSNLLFS*SGYVVILMAVS
Trigger: TGAAACTGCCATCAATATTACAACGTATCCAGACCAGGAGAACAACAAGTTGCTTAGGGGACTCTGTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS CCA 72 bp TATCCCCTTTCAAAAAGAGTTGTGCCTTCTATTTGCTaGTCCCATGACACGAGCATGTCTTATAGGATGTTG +
Preference number: 6 (lower is better)
Translates to: YPLSKRVVPSIC*SHDTSMSYRML
Trigger: CAACATCCTATAAGACATGCTCGTGTCATGGGACCAGCAAATAGAAGGCACAACTCTTTTTGAAAGGGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464690.5
CDS CAA 72 bp AGGGTTGAAAGATGGGTTGAGGCACTTGAGAAACTCTaGGAAGCTGAGTTTCCAATCAGCATTTTCATCAGA +
Preference number: 6 (lower is better)
Translates to: RVERWVEALEKL*EAEFPISIFIR
Trigger: TCTGATGAAAATGCTGATTGGAAACTCAGCTTCCAAGAGTTTCTCAAGTGCCTCAACCCATCTTTCAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295633.8
ENST00000424703.6
CDS CAA 90 bp ACAGAAGTCTTACTGGCATTTCCAGTTATCCCCTTTCAAAAAGAGTaGTGCCTTCTATTTGCTGGTCCCATGACACGAGCATGTCTTATA +
Preference number: 6 (lower is better)
Translates to: TEVLLAFPVIPFQKE*CLLFAGPMTRACLI
Trigger: TATAAGACATGCTCGTGTCATGGGACCAGCAAATAGAAGGCACAACTCTTTTTGAAAGGGGATAACTGGAAATGCCAGTAAGACTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464690.5