Pregenerated sensors for FSCN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000075618Ensembl transcript IDs: ENST00000405801.2, ENST00000447103.5, ENST00000473330.1
Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | TGGCAGACAGGTCCATACCAGAGGGTAGGGGCTTCCCGAGGGAGCTaGCCTGGGGTCTCCCGGCTCGCGCTGAAGCCGCCCTCGGTCGCC | + |
Preference number: 5 (lower is better) Translates to: WQTGPYQRVGASRGS*PGVSRLALKPPSVA Trigger: GGCGACCGAGGGCGGCTTCAGCGCGAGCCGGGAGACCCCAGGCCAGCTCCCTCGGGAAGCCCCTACCCTCTGGTATGGACCTGTCTGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405801.2 |
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CDS CCA 90 bp | CGGATCGAGTTGCAGTCAATTGTTCCCGGCGAGCGCCCTAGGGGATaGGTTCACCAGAGGGTAGGGGCTTCCCGAGGGAGCTGGCCTGGG | + |
Preference number: 5 (lower is better) Translates to: RIELQSIVPGERPRG*VHQRVGASRGSWPG Trigger: CCCAGGCCAGCTCCCTCGGGAAGCCCCTACCCTCTGGTGAACCCATCCCCTAGGGCGCTCGCCGGGAACAATTGACTGCAACTCGATCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447103.5 |
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CDS CCA 90 bp | AGCCCTGAGCTCACAGAACTACACACGCAAGGTAACACCACGGGGTaGGGTGGGCGGCCGAGTCCCCACAGTGGCACACATGAGAAGCAG | + |
Preference number: 5 (lower is better) Translates to: SPELTELHTQGNTTG*GGRPSPHSGTHEKQ Trigger: CTGCTTCTCATGTGTGCCACTGTGGGGACTCGGCCGCCCACCCCACCCCGTGGTGTTACCTTGCGTGTGTAGTTCTGTGAGCTCAGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473330.1 |
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CDS CCA 72 bp | GGTCCATACCAGAGGGTAGGGGCTTCCCGAGGGAGCTaGCCTGGGGTCTCCCGGCTCGCGCTGAAGCCGCCC | + |
Preference number: 6 (lower is better) Translates to: GPYQRVGASRGS*PGVSRLALKPP Trigger: GGGCGGCTTCAGCGCGAGCCGGGAGACCCCAGGCCAGCTCCCTCGGGAAGCCCCTACCCTCTGGTATGGACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405801.2 |
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CDS CCA 72 bp | TGGGTTCACCAGAGGGTAGGGGCTTCCCGAGGGAGCTaGCCTGGGGTCTCCCGGCTCGCGCTGAAGCCGCCC | + |
Preference number: 6 (lower is better) Translates to: WVHQRVGASRGS*PGVSRLALKPP Trigger: GGGCGGCTTCAGCGCGAGCCGGGAGACCCCAGGCCAGCTCCCTCGGGAAGCCCCTACCCTCTGGTGAACCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447103.5 |
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CDS TCA 72 bp | GTGGGGTGGGCGGCCGAGTCCCCACAGTGGCACACATaGGAAGCAGCAGAGAGCACCCAGGAACGCAGGCAG | + |
Preference number: 6 (lower is better) Translates to: VGWAAESPQWHT*EAAESTQERRQ Trigger: CTGCCTGCGTTCCTGGGTGCTCTCTGCTGCTTCTCATGTGTGCCACTGTGGGGACTCGGCCGCCCACCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473330.1 |
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CDS CCA 72 bp | CTCACAGAACTACACACGCAAGGTAACACCACGGGGTaGGGTGGGCGGCCGAGTCCCCACAGTGGCACACAT | + |
Preference number: 6 (lower is better) Translates to: LTELHTQGNTTG*GGRPSPHSGTH Trigger: ATGTGTGCCACTGTGGGGACTCGGCCGCCCACCCCACCCCGTGGTGTTACCTTGCGTGTGTAGTTCTGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473330.1 |
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CDS TCA 72 bp | GGTCAGAGGCCAAGGCAAGCTACATCTGTTCCCACATaGCTTTCCCCAGTTAGAGAAATAATAGGGGCCAGG | + |
Preference number: 6 (lower is better) Translates to: GQRPRQATSVPT*LSPVREIIGAR Trigger: CCTGGCCCCTATTATTTCTCTAACTGGGGAAAGTCATGTGGGAACAGATGTAGCTTGCCTTGGCCTCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473330.1 |