Pregenerated sensors for FSCN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000075618

Ensembl transcript IDs: ENST00000405801.2, ENST00000447103.5, ENST00000473330.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TGGCAGACAGGTCCATACCAGAGGGTAGGGGCTTCCCGAGGGAGCTaGCCTGGGGTCTCCCGGCTCGCGCTGAAGCCGCCCTCGGTCGCC	+
Preference number: 5 (lower is better) Translates to: WQTGPYQRVGASRGS*PGVSRLALKPPSVA Trigger: GGCGACCGAGGGCGGCTTCAGCGCGAGCCGGGAGACCCCAGGCCAGCTCCCTCGGGAAGCCCCTACCCTCTGGTATGGACCTGTCTGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405801.2
CDS CCA 90 bp	CGGATCGAGTTGCAGTCAATTGTTCCCGGCGAGCGCCCTAGGGGATaGGTTCACCAGAGGGTAGGGGCTTCCCGAGGGAGCTGGCCTGGG	+
Preference number: 5 (lower is better) Translates to: RIELQSIVPGERPRG*VHQRVGASRGSWPG Trigger: CCCAGGCCAGCTCCCTCGGGAAGCCCCTACCCTCTGGTGAACCCATCCCCTAGGGCGCTCGCCGGGAACAATTGACTGCAACTCGATCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447103.5
CDS CCA 90 bp	AGCCCTGAGCTCACAGAACTACACACGCAAGGTAACACCACGGGGTaGGGTGGGCGGCCGAGTCCCCACAGTGGCACACATGAGAAGCAG	+
Preference number: 5 (lower is better) Translates to: SPELTELHTQGNTTG*GGRPSPHSGTHEKQ Trigger: CTGCTTCTCATGTGTGCCACTGTGGGGACTCGGCCGCCCACCCCACCCCGTGGTGTTACCTTGCGTGTGTAGTTCTGTGAGCTCAGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473330.1
CDS CCA 72 bp	GGTCCATACCAGAGGGTAGGGGCTTCCCGAGGGAGCTaGCCTGGGGTCTCCCGGCTCGCGCTGAAGCCGCCC	+
Preference number: 6 (lower is better) Translates to: GPYQRVGASRGS*PGVSRLALKPP Trigger: GGGCGGCTTCAGCGCGAGCCGGGAGACCCCAGGCCAGCTCCCTCGGGAAGCCCCTACCCTCTGGTATGGACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405801.2
CDS CCA 72 bp	TGGGTTCACCAGAGGGTAGGGGCTTCCCGAGGGAGCTaGCCTGGGGTCTCCCGGCTCGCGCTGAAGCCGCCC	+
Preference number: 6 (lower is better) Translates to: WVHQRVGASRGS*PGVSRLALKPP Trigger: GGGCGGCTTCAGCGCGAGCCGGGAGACCCCAGGCCAGCTCCCTCGGGAAGCCCCTACCCTCTGGTGAACCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447103.5
CDS TCA 72 bp	GTGGGGTGGGCGGCCGAGTCCCCACAGTGGCACACATaGGAAGCAGCAGAGAGCACCCAGGAACGCAGGCAG	+
Preference number: 6 (lower is better) Translates to: VGWAAESPQWHT*EAAESTQERRQ Trigger: CTGCCTGCGTTCCTGGGTGCTCTCTGCTGCTTCTCATGTGTGCCACTGTGGGGACTCGGCCGCCCACCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473330.1
CDS CCA 72 bp	CTCACAGAACTACACACGCAAGGTAACACCACGGGGTaGGGTGGGCGGCCGAGTCCCCACAGTGGCACACAT	+
Preference number: 6 (lower is better) Translates to: LTELHTQGNTTG*GGRPSPHSGTH Trigger: ATGTGTGCCACTGTGGGGACTCGGCCGCCCACCCCACCCCGTGGTGTTACCTTGCGTGTGTAGTTCTGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473330.1
CDS TCA 72 bp	GGTCAGAGGCCAAGGCAAGCTACATCTGTTCCCACATaGCTTTCCCCAGTTAGAGAAATAATAGGGGCCAGG	+
Preference number: 6 (lower is better) Translates to: GQRPRQATSVPT*LSPVREIIGAR Trigger: CCTGGCCCCTATTATTTCTCTAACTGGGGAAAGTCATGTGGGAACAGATGTAGCTTGCCTTGGCCTCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473330.1

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