Pregenerated sensors for FOXI3 (Homo sapiens)
Ensembl gene IDs: ENSG00000214336Ensembl transcript IDs: ENST00000428390.3
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCCGCCCTCACGGGGCTCACAGGCTACCTATCACAGAAGACAGTaGAACGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAACCTG | + |
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Preference number: 1 (lower is better) Translates to: SPPSRGSQATYHRRQ*NGFLSGEAHMQRNL Trigger: CAGGTTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGATAGGTAGCCTGTGAGCCCCGTGAGGGCGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR TCA 90 bp | GGAACTCGACAGAAACGCAGAACTCAGGTCCTACCCCAGACCTACTaGCTTGGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: GTRQKRRTQVLPQTY*LGICILISMCARLR Trigger: CCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAGTAGGTCTGGGGTAGGACCTGAGTTCTGCGTTTCTGTCGAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR CCA 90 bp | TCGACAGAAACGCAGAACTCAGGTCCTACCCCAGACCTACTGACTTaGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: STETQNSGPTPDLLT*NLHSNQHVCTPQVC Trigger: GCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAGTAGGTCTGGGGTAGGACCTGAGTTCTGCGTTTCTGTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR CCA 90 bp | CTCACAGGCTACCTATCACAGAAGACAGTGAAACGGATTTCTCTCTaGAGAGGCCCACATGCAGAGAAACCTGTAAAAGCTCGCTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: LTGYLSQKTVKRISL*RGPHAEKPVKARWV Trigger: AACCCAGCGAGCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGATAGGTAGCCTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR TCA 90 bp | TACAGAAGTTACAAGCACCAGCTCTGGAACCAGATTGTCTGGGTCTaGTCCTGGCTCCAGTTTACTATCAGTCTCACCTTGGAAAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: YRSYKHQLWNQIVWV*SWLQFTISLTLESG Trigger: ACCACTTTCCAAGGTGAGACTGATAGTAAACTGGAGCCAGGATCAGACCCAGACAATCTGGTTCCAGAGCTGGTGCTTGTAACTTCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR CCA 90 bp | TCTCTCTGGAGAGGCCCACATGCAGAGAAACCTGTAAAAGCTCGCTaGGTTGTAGCAAGAGTTATCTACTACACCCTCATTACTCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: SLWRGPHAEKPVKAR*VVARVIYYTLITPS Trigger: ACTTGGAGTAATGAGGGTGTAGTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR GCA 90 bp | ATCACAGAAGACAGTGAAACGGATTTCTCTCTGGAGAGGCCCACATaGAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGCAAGAGTTAT | + |
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Preference number: 1 (lower is better) Translates to: ITEDSETDFSLERPT*RETCKSSLGCSKSY Trigger: ATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR CCA 90 bp | AGCTCCATTCCTTCCCTCTATATACTTATAACTGGCTATGGAGGCTaGTTTCTTGGTTTTGCAGGAAGTAGAATACAGAAGTTACAAGCA | + |
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Preference number: 1 (lower is better) Translates to: SSIPSLYILITGYGG*FLGFAGSRIQKLQA Trigger: TGCTTGTAACTTCTGTATTCTACTTCCTGCAAAACCAAGAAACCAGCCTCCATAGCCAGTTATAAGTATATAGAGGGAAGGAATGGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR-3UTR CCA 90 bp | CGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAACCTGTAAAAGCTCGCTGGTCATTACTCCAAGTGTaGTCAAAGGACCACGAGATC | + |
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Preference number: 2 (lower is better) Translates to: RISLWRGPHAEKPVKARWSLLQV*SKDHEI Trigger: GATCTCGTGGTCCTTTGACCACACTTGGAGTAATGA...CCAGCGAGCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR-3UTR GCA 90 bp | TGCAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGCAAGAGTTATCTACTACACTGCACGCCTCAGGTGTaGATACTCAAGTCTGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: CRETCKSSLGCSKSYLLHCTPQV*ILKSES Trigger: ACTCTCAGACTTGAGTATGCACACCTGAGGCGTGCA...GTGTAGTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR-3UTR TCA 90 bp | CCTATAAAAATTCAGATATCTGGCTCTTCTATAAAAATCAGAATGCTGGCTGGGCTGAGGTCAGGAGTTTaGGACCAGCCTGGCCAACAA | + |
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Preference number: 2 (lower is better) Translates to: PIKIQISGSSIKIRMLAGLRSGV*DQPGQQ Trigger: TTGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAG...CCCAGCCAGCATTCTGATTTTTATAGAAGAGCCAGATATCTGAATTTTTATAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR-3UTR GCA 90 bp | CCTATAAAAATTCAGATATCTGGCTCTTCTATAAAAATCAGAATGCTGGCTGGGCTGGAGAGGCCCACATaGAGAGAAACCTGTAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: PIKIQISGSSIKIRMLAGLERPT*RETCKS Trigger: GCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAG...CCCAGCCAGCATTCTGATTTTTATAGAAGAGCCAGATATCTGAATTTTTATAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTGCACATTTGAGCTTGCAATCCTGGTATACAGTGATGACTAAAATAGACCCCTTACATGGAAAATaGGGGGTAGTAACAATACCC | + |
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Preference number: 2 (lower is better) Translates to: TCAHLSLQSWYTVMTKIDPLHGK*GVVTIP Trigger: GGGTATTGTTACTACCCCCCATTTTCCATGTAAGGG...GTCTATTTTAGTCATCACTGTATACCAGGATTGCAAGCTCAAATGTGCACAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTGGTCAAATGAGATCTAGCTCCATTCCTTCCCTCTATATACTTATAACTTGTACCAGACAGAGGTaGTTTGTGAGCTGCCTATGC | + |
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Preference number: 2 (lower is better) Translates to: IFGQMRSSSIPSLYILITCTRQR*FVSCLC Trigger: GCATAGGCAGCTCACAAATCACCTCTGTCTGGTACA...AGTTATAAGTATATAGAGGGAAGGAATGGAGCTAGATCTCATTTGACCAAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR-3UTR TCA 90 bp | ACCTGTGCACATTTGAGCTTGCAATCCTGGTATACAGTGATGACTAAAATAGACTCTGAGAGGATTAAATaGATACATGACAAGTGCCGA | + |
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Preference number: 2 (lower is better) Translates to: TCAHLSLQSWYTVMTKIDSERIK*IHDKCR Trigger: TCGGCACTTGTCATGTATTCATTTAATCCTCTCAGA...GTCTATTTTAGTCATCACTGTATACCAGGATTGCAAGCTCAAATGTGCACAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR-3UTR CCA 90 bp | ATCTTTGGTCAAATGAGATCTAGCTCCATTCCTTCCCTCTATATACTTATAACTCCTGTAAAAGCTCGCTaGGTTGTAGCAAGAGTTATC | + |
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Preference number: 2 (lower is better) Translates to: IFGQMRSSSIPSLYILITPVKAR*VVARVI Trigger: GATAACTCTTGCTACAACCCAGCGAGCTTTTACAGG...AGTTATAAGTATATAGAGGGAAGGAATGGAGCTAGATCTCATTTGACCAAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR-3UTR GCA 90 bp | CCTATAAAAATTCAGATATCTGGCTCTTCTATAAAAATCAGAATGCTGGCTGGGCTCTACTGCTTCAGTTaGCAACTGATGTTAGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: PIKIQISGSSIKIRMLAGLYCFS*QLMLVF Trigger: GAAAACTAACATCAGTTGGCAACTGAAGCAGTAGAG...CCCAGCCAGCATTCTGATTTTTATAGAAGAGCCAGATATCTGAATTTTTATAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR TCA 72 bp | TCACGGGGCTCACAGGCTACCTATCACAGAAGACAGTaGAACGGATTTCTCTCTGGAGAGGCCCACATGCAG | + |
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Preference number: 3 (lower is better) Translates to: SRGSQATYHRRQ*NGFLSGEAHMQ Trigger: CTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGATAGGTAGCCTGTGAGCCCCGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR-3UTR CAA 90 bp | ACCTGTGCACATTTGAGCTTGCAATCCTGGTATACAGTGATGACTAAAATAGACCCCAGGAGGCGGAGGTaGCAGCACCACTGCACTCCA | + |
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Preference number: 3 (lower is better) Translates to: TCAHLSLQSWYTVMTKIDPRRRR*QHHCTP Trigger: TGGAGTGCAGTGGTGCTGCAACCTCCGCCTCCTGGG...GTCTATTTTAGTCATCACTGTATACCAGGATTGCAAGCTCAAATGTGCACAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR GCA 72 bp | GACAGTGAAACGGATTTCTCTCTGGAGAGGCCCACATaGAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: DSETDFSLERPT*RETCKSSLGCS Trigger: GCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR CCA 72 bp | ACGCAGAACTCAGGTCCTACCCCAGACCTACTGACTTaGAATCTGCATTCTAATCAGCATGTGTGCACGCCT | + |
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Preference number: 3 (lower is better) Translates to: TQNSGPTPDLLT*NLHSNQHVCTP Trigger: AGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAGTAGGTCTGGGGTAGGACCTGAGTTCTGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR TCA 72 bp | TACAAGCACCAGCTCTGGAACCAGATTGTCTGGGTCTaGTCCTGGCTCCAGTTTACTATCAGTCTCACCTTG | + |
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Preference number: 3 (lower is better) Translates to: YKHQLWNQIVWV*SWLQFTISLTL Trigger: CAAGGTGAGACTGATAGTAAACTGGAGCCAGGATCAGACCCAGACAATCTGGTTCCAGAGCTGGTGCTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR TCA 72 bp | CAATACCCACCACCCAAGGTTTCTGAGAGGATTAAATaGATACATGACAAGTGCCGAGAACAGTGCCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: QYPPPKVSERIK*IHDKCREQCLA Trigger: TGCCAGGCACTGTTCTCGGCACTTGTCATGTATTCATTTAATCCTCTCAGAAACCTTGGGTGGTGGGTATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR GCA 72 bp | CTACTGACTTGGAATCTGCATTCTAATCAGCATGTGTaGACGCCTCAGGTGTGCATACTCAAGTCTGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: LLTWNLHSNQHV*TPQVCILKSES Trigger: ACTCTCAGACTTGAGTATGCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAGTAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR CCA 72 bp | AGAGGCCCACATGCAGAGAAACCTGTAAAAGCTCGCTaGGTTGTAGCAAGAGTTATCTACTACACCCTCATT | + |
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Preference number: 3 (lower is better) Translates to: RGPHAEKPVKAR*VVARVIYYTLI Trigger: AATGAGGGTGTAGTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCATGTGGGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR-3UTR CAA 90 bp | ACCTGTGCACATTTGAGCTTGCAATCCTGGTATACAGTGATGACTAAAATAGACGGCACACAAGGCTGCTaGTGCCATTTTATTGCCATT | + |
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Preference number: 3 (lower is better) Translates to: TCAHLSLQSWYTVMTKIDGTQGC*CHFIAI Trigger: AATGGCAATAAAATGGCACAAGCAGCCTTGTGTGCC...GTCTATTTTAGTCATCACTGTATACCAGGATTGCAAGCTCAAATGTGCACAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| 3UTR-3UTR CAA 90 bp | ATCTTTGGTCAAATGAGATCTAGCTCCATTCCTTCCCTCTATATACTTATAACTTGTGCACATTTGAGCTaGCAATCCTGGTATACAGTG | + |
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Preference number: 3 (lower is better) Translates to: IFGQMRSSSIPSLYILITCAHLS*QSWYTV Trigger: CACTGTATACCAGGATTGCAAGCTCAAATGTGCACA...AGTTATAAGTATATAGAGGGAAGGAATGGAGCTAGATCTCATTTGACCAAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | ATGGTCCCCGCCCTCACGGGGCTCACAGGCTACCTATCACAGAAGACAGTGAAAGGGAGAACACGCCGCTaGAGGGCAGCTGGGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: MVPALTGLTGYLSQKTVKGRTRR*RAAGPP Trigger: AGGGGGCCCAGCTGCCCTCCAGCGGCGTGTTCTCCC...TTTCACTGTCTTCTGTGATAGGTAGCCTGTGAGCCCCGTGAGGGCGGGGACCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | ATGGTCCCCGCCCTCACGGGGCTCACAGGCTACCTATCACAGAAGACAGTGAAAAGGCAGTACTCTTGGTaGCCTCCGGAGGCTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: MVPALTGLTGYLSQKTVKRQYSW*PPEALG Trigger: CCCCAGAGCCTCCGGAGGGCACCAAGAGTACTGCCT...TTTCACTGTCTTCTGTGATAGGTAGCCTGTGAGCCCCGTGAGGGCGGGGACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | ATGGTCCCCGCCCTCACGGGGCTCACAGGCTACCTATCACAGAAGACAGTGAAACCAGGGAGAGCCCGCTaGGTACTCACACTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: MVPALTGLTGYLSQKTVKPGRAR*VLTLLL Trigger: CAGCAGCAGTGTGAGTACCCAGCGGGCTCTCCCTGG...TTTCACTGTCTTCTGTGATAGGTAGCCTGTGAGCCCCGTGAGGGCGGGGACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR TCA 90 bp | ATGGTCCCCGCCCTCACGGGGCTCACAGGCTACCTATCACAGAAGACAGTGAAACCCTTCTTCGGACTTTaGTGTCCCAGCAGCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: MVPALTGLTGYLSQKTVKPFFGL*CPSSHC Trigger: ACAGTGGCTGCTGGGACATCAAAGTCCGAAGAAGGG...TTTCACTGTCTTCTGTGATAGGTAGCCTGTGAGCCCCGTGAGGGCGGGGACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CTGACTTGGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGGTGTGCATATTTGGGGGCCAACCCTaGGGCTCCGCCTTCACCCGC | + |
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Preference number: 4 (lower is better) Translates to: LTWNLHSNQHVCTPQVCIFGGQP*GSAFTR Trigger: GCGGGTGAAGGCGGAGCCGCAGGGTTGGCCCCCAAA...TATGCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CCACATGCAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGCAAGAGTTATCTACTCCCTAGGTGGCGGCTaGCAGGGAGAGCCCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PHAEKPVKARWVVARVIYSLGGG*QGEPAG Trigger: CCCAGCGGGCTCTCCCTGGCAGCCGCCACCTAGGGA...GTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | TCACAGAAGACAGTGAAACGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAACCCTGGATCCCTAGGTaGCGGCTGCCAGGGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SQKTVKRISLWRGPHAEKPWIPR*RLPGRA Trigger: GGCTCTCCCTGGCAGCCGCCACCTAGGGATCCAGGG...TTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | CGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAACCTGTAAAAGCTCGCTGGCTGAGGCCTCTGAGATaGAGGTCGGGGAGAACACGC | + |
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Preference number: 4 (lower is better) Translates to: RISLWRGPHAEKPVKARWLRPLR*RSGRTR Trigger: GCGTGTTCTCCCCGACCTCCATCTCAGAGGCCTCAG...CCAGCGAGCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | TGCAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGCAAGAGTTATCTACTACACGAGAGCAGCCGAAGGTaGCGGCGGCAGGCGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: CRETCKSSLGCSKSYLLHESSRR*RRQAVA Trigger: AGCCACCGCCTGCCGCCGGCACCTTCGGCTGCTCTC...GTGTAGTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CTGACTTGGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGGTGTGCATACTGAAGGGGCTGCTTTaGCCCCCGCTGGTGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LTWNLHSNQHVCTPQVCILKGLL*PPLVLA Trigger: TGCCAGCACCAGCGGGGGGCAAAGCAGCCCCTTCAG...TATGCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | CTAGTCAGTCCCAACTACCCTCTACTGCTTCAGTTGCCAACTGATGTTAGTTTTGGCAGCTGGGCCCCCTaGATCCCTAGGTGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LVSPNYPLLLQLPTDVSFGSWAP*IPRWRL Trigger: CAGCCGCCACCTAGGGATCCAGGGGGCCCAGCTGCC...AAAACTAACATCAGTTGGCAACTGAAGCAGTAGAGGGTAGTTGGGACTGACTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | ATGGTCCCCGCCCTCACGGGGCTCACAGGCTACCTATCACAGAAGACAGTGAAACCTGGCACACAAGGCTaGTTGTGCCATTTTATTGCC | + |
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Preference number: 4 (lower is better) Translates to: MVPALTGLTGYLSQKTVKPGTQG*LCHFIA Trigger: GGCAATAAAATGGCACAAGCAGCCTTGTGTGCCAGG...TTTCACTGTCTTCTGTGATAGGTAGCCTGTGAGCCCCGTGAGGGCGGGGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR TCA 90 bp | ACCTGTGCACATTTGAGCTTGCAATCCTGGTATACAGTGATGACTAAAATAGACTGCGCGAAGGGCCGCTaGGAGCAGCCGAAGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: TCAHLSLQSWYTVMTKIDCAKGR*EQPKVP Trigger: CGGCACCTTCGGCTGCTCTCAGCGGCCCTTCGCGCA...GTCTATTTTAGTCATCACTGTATACCAGGATTGCAAGCTCAAATGTGCACAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR TCA 90 bp | TCACAGAAGACAGTGAAACGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAAGGGTCCTCCAGGAGATaGGGCAGTACTCTTGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SQKTVKRISLWRGPHAEKGSSRR*GSTLGA Trigger: GGCACCAAGAGTACTGCCTCATCTCCTGGAGGACCC...TTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | ACCTGTGCACATTTGAGCTTGCAATCCTGGTATACAGTGATGACTAAAATAGACCCGCTGGAGGGCAGCTaGGCCCCCTGGATCCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: TCAHLSLQSWYTVMTKIDPLEGS*APWIPR Trigger: CCTAGGGATCCAGGGGGCCCAGCTGCCCTCCAGCGG...GTCTATTTTAGTCATCACTGTATACCAGGATTGCAAGCTCAAATGTGCACAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | TGCAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGCAAGAGTTATCTACTACACCCACTGTGGAGCCATTaGTGGCCTCAGAGCGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: CRETCKSSLGCSKSYLLHPLWSH*WPQSGA Trigger: AGCGCCGCTCTGAGGCCAGCAATGGCTCCACAGTGG...GTGTAGTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAACCTGTAAAAGCTCGCTGGAAGATCTCTGGCCGGTaGTATTGCTGGTGCTATTGC | + |
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Preference number: 4 (lower is better) Translates to: RISLWRGPHAEKPVKARWKISGR*YCWCYC Trigger: GCAATAGCACCAGCAATAGCACCGGCCAGAGATCTT...CCAGCGAGCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAACCTGTAAAAGCTCGCTGGTGCACGCCTCAGGTGTaGATACTCAAGTCTGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: RISLWRGPHAEKPVKARWCTPQV*ILKSES Trigger: ACTCTCAGACTTGAGTATGCACACCTGAGGCGTGCA...CCAGCGAGCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | CCTCTATATACTTATAACTGGCTATGGAGGCTGGTTTCTTGGTTTTGCAGGAAGTCAGGTCCTCGCGGCTaGCCATGGACAGCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PLYTYNWLWRLVSWFCRKSGPRG*PWTASP Trigger: TGGGCTGGCTGTCCATGGCCAGCCGCGAGGACCTGA...CTTCCTGCAAAACCAAGAAACCAGCCTCCATAGCCAGTTATAAGTATATAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | CCACATGCAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGCAAGAGTTATCTACTCCCAGCAGCCACTGTaGAGCCATTGCTGGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PHAEKPVKARWVVARVIYSQQPL*SHCWPQ Trigger: CTGAGGCCAGCAATGGCTCCACAGTGGCTGCTGGGA...GTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCATGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | ATGGTCCCCGCCCTCACGGGGCTCACAGGCTACCTATCACAGAAGACAGTGAAAATACAAAACATTAGCTaGATGTGGTGGCAGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: MVPALTGLTGYLSQKTVKIQNIS*MWWQAP Trigger: AGGTGCCTGCCACCACATCCAGCTAATGTTTTGTAT...TTTCACTGTCTTCTGTGATAGGTAGCCTGTGAGCCCCGTGAGGGCGGGGACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR TCA 90 bp | CTAGTCAGTCCCAACTACCCTCTACTGCTTCAGTTGCCAACTGATGTTAGTTTTTCCAGACCCCAATCCTaGGGAGAGCCCTTCTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVSPNYPLLLQLPTDVSFSRPQS*GEPFFG Trigger: TCCGAAGAAGGGCTCTCCTCAGGATTGGGGTCTGGA...AAAACTAACATCAGTTGGCAACTGAAGCAGTAGAGGGTAGTTGGGACTGACTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR TCA 90 bp | ATGGTCCCCGCCCTCACGGGGCTCACAGGCTACCTATCACAGAAGACAGTGAAATCTGAGAGGATTAAATaGATACATGACAAGTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: MVPALTGLTGYLSQKTVKSERIK*IHDKCR Trigger: TCGGCACTTGTCATGTATTCATTTAATCCTCTCAGA...TTTCACTGTCTTCTGTGATAGGTAGCCTGTGAGCCCCGTGAGGGCGGGGACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CCACATGCAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGCAAGAGTTATCTACAAGTGCCGAGAACAGTaGCTGGCACACAAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PHAEKPVKARWVVARVIYKCREQ*LAHKAA Trigger: AGCAGCCTTGTGTGCCAGGCACTGTTCTCGGCACTT...GTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | CTGACTTGGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGGTGTGCATAGGCCGGTGCTATTGCTaGTGCTATTGCTCAGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTWNLHSNQHVCTPQVCIGRCYC*CYCSVA Trigger: TGCAACTGAGCAATAGCACCAGCAATAGCACCGGCC...TATGCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | TCACAGAAGACAGTGAAACGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAATCTGGCCGGTGCTATTaGTGGTGCTATTGCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQKTVKRISLWRGPHAEKSGRCY*WCYCSV Trigger: AACTGAGCAATAGCACCAGCAATAGCACCGGCCAGA...TTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR TCA 90 bp | CCTCTATATACTTATAACTGGCTATGGAGGCTGGTTTCTTGGTTTTGCAGGAAGCTGAGGTCAGGAGTTTaGGACCAGCCTGGCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PLYTYNWLWRLVSWFCRKLRSGV*DQPGQQ Trigger: TTGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAG...CTTCCTGCAAAACCAAGAAACCAGCCTCCATAGCCAGTTATAAGTATATAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR TCA 90 bp | CCACATGCAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGCAAGAGTTATCTACTGTACCAGACAGAGGTaGTTTGTGAGCTGCCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: PHAEKPVKARWVVARVIYCTRQR*FVSCLC Trigger: GCATAGGCAGCTCACAAATCACCTCTGTCTGGTACA...GTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCATGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CCTATAAAAATTCAGATATCTGGCTCTTCTATAAAAATCAGAATGCTGGCTGGGGGGGGCAGGCCGGGCTaGGAATACACTCCGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PIKIQISGSSIKIRMLAGGGRPG*EYTPKL Trigger: CAACTTCGGAGTGTATTCGCAGCCCGGCCTGCCCCC...CCCAGCCAGCATTCTGATTTTTATAGAAGAGCCAGATATCTGAATTTTTATAGG 48% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | TGCAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGCAAGAGTTATCTACTACACGTGCTATTGCTCAGTTaGAAGGTGTCTGCTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CRETCKSSLGCSKSYLLHVLLLS*KVSAEA Trigger: GGCCTCAGCAGACACCTTGCAACTGAGCAATAGCAC...GTGTAGTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CTAGTCAGTCCCAACTACCCTCTACTGCTTCAGTTGCCAACTGATGTTAGTTTTTCAAGTCTGAGAGTCTaGTCTACACCTCGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVSPNYPLLLQLPTDVSFSSLRV*STPRSP Trigger: AGGGCTCCGAGGTGTAGAGCAGACTCTCAGACTTGA...AAAACTAACATCAGTTGGCAACTGAAGCAGTAGAGGGTAGTTGGGACTGACTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CTGACTTGGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGGTGTGCATACCAACTACCCTCTACTaGTTCAGTTGCCAACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTWNLHSNQHVCTPQVCIPTTLY*FSCQLM Trigger: CATCAGTTGGCAACTGAAGCAGTAGAGGGTAGTTGG...TATGCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | ATCTTTGGTCAAATGAGATCTAGCTCCATTCCTTCCCTCTATATACTTATAACTGCGAGAGCATCCCTTTaGGGGCCAACCCTGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IFGQMRSSSIPSLYILITARASL*GPTLRL Trigger: GAGCCGCAGGGTTGGCCCCCAAAGGGATGCTCTCGC...AGTTATAAGTATATAGAGGGAAGGAATGGAGCTAGATCTCATTTGACCAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | ACCTGTGCACATTTGAGCTTGCAATCCTGGTATACAGTGATGACTAAAATAGACATGAGGCAGTACTCTTaGTGCCCTCCGGAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TCAHLSLQSWYTVMTKIDMRQYS*CPPEAL Trigger: CAGAGCCTCCGGAGGGCACCAAGAGTACTGCCTCAT...GTCTATTTTAGTCATCACTGTATACCAGGATTGCAAGCTCAAATGTGCACAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | CTGACTTGGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGGTGTGCATAACTGGCTATGGAGGCTaGTTTCTTGGTTTTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTWNLHSNQHVCTPQVCITGYGG*FLGFAG Trigger: TCCTGCAAAACCAAGAAACCAGCCTCCATAGCCAGT...TATGCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | ATCTTTGGTCAAATGAGATCTAGCTCCATTCCTTCCCTCTATATACTTATAACTTCTGCCAGCCGGCCTTaGTGCGCTGGTAGAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IFGQMRSSSIPSLYILITSASRP*CAGRRG Trigger: TCCCCTTCTACCAGCGCAGCAAGGCCGGCTGGCAGA...AGTTATAAGTATATAGAGGGAAGGAATGGAGCTAGATCTCATTTGACCAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CTAGTCAGTCCCAACTACCCTCTACTGCTTCAGTTGCCAACTGATGTTAGTTTTCTGGAGAGGCCCACATaGAGAGAAACCTGTAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSPNYPLLLQLPTDVSFLERPT*RETCKS Trigger: GCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAG...AAAACTAACATCAGTTGGCAACTGAAGCAGTAGAGGGTAGTTGGGACTGACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CCTATAAAAATTCAGATATCTGGCTCTTCTATAAAAATCAGAATGCTGGCTGGGAGGTTGCAGCACCACTaGACTCCAGCCTGGGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: PIKIQISGSSIKIRMLAGRLQHH*TPAWAT Trigger: TGTCGCCCAGGCTGGAGTGCAGTGGTGCTGCAACCT...CCCAGCCAGCATTCTGATTTTTATAGAAGAGCCAGATATCTGAATTTTTATAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | TGCAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGCAAGAGTTATCTACTACACACCATGCTAAAGTTGTaGAAAGGGCTGCTGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRETCKSSLGCSKSYLLHTMLKL*KGLLKG Trigger: CCCCTTCAGCAGCCCTTTCCACAACTTTAGCATGGT...GTGTAGTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | TCACAGAAGACAGTGAAACGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAATCATTACTCCAAGTGTaGTCAAAGGACCACGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SQKTVKRISLWRGPHAEKSLLQV*SKDHEI Trigger: GATCTCGTGGTCCTTTGACCACACTTGGAGTAATGA...TTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | CTGACTTGGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGGTGTGCATACCTGTAAAAGCTCGCTaGGTTGTAGCAAGAGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LTWNLHSNQHVCTPQVCIPVKAR*VVARVI Trigger: GATAACTCTTGCTACAACCCAGCGAGCTTTTACAGG...TATGCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | TCACAGAAGACAGTGAAACGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAACCCTTACATGGAAAATaGGGGGTAGTAACAATACCC | + |
|
Preference number: 4 (lower is better) Translates to: SQKTVKRISLWRGPHAEKPLHGK*GVVTIP Trigger: GGGTATTGTTACTACCCCCCATTTTCCATGTAAGGG...TTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | CGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAACCTGTAAAAGCTCGCTGGCTATATACTTATAACTaGCTATGGAGGCTGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RISLWRGPHAEKPVKARWLYTYN*LWRLVS Trigger: AGAAACCAGCCTCCATAGCCAGTTATAAGTATATAG...CCAGCGAGCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CTGACTTGGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGGTGTGCATATTTGTGAGCTGCCTATaGATAGCTCAAGGATTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTWNLHSNQHVCTPQVCIFVSCL*IAQGFV Trigger: CACAAATCCTTGAGCTATGCATAGGCAGCTCACAAA...TATGCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | ATCTTTGGTCAAATGAGATCTAGCTCCATTCCTTCCCTCTATATACTTATAACTCTGTGGAGCCATTGCTaGCCTCAGAGCGGCGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFGQMRSSSIPSLYILITLWSHC*PQSGAF Trigger: GAAAGCGCCGCTCTGAGGCCAGCAATGGCTCCACAG...AGTTATAAGTATATAGAGGGAAGGAATGGAGCTAGATCTCATTTGACCAAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR TCA 90 bp | ACCTGTGCACATTTGAGCTTGCAATCCTGGTATACAGTGATGACTAAAATAGACCAGATTGTCTGGGTCTaGTCCTGGCTCCAGTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: TCAHLSLQSWYTVMTKIDQIVWV*SWLQFT Trigger: AGTAAACTGGAGCCAGGATCAGACCCAGACAATCTG...GTCTATTTTAGTCATCACTGTATACCAGGATTGCAAGCTCAAATGTGCACAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR TCA 90 bp | TCACAGAAGACAGTGAAACGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAAGAATCTTTGGTCAAATaGGATCTAGCTCCATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQKTVKRISLWRGPHAEKESLVK*DLAPFL Trigger: AAGGAATGGAGCTAGATCTCATTTGACCAAAGATTC...TTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | ATCTTTGGTCAAATGAGATCTAGCTCCATTCCTTCCCTCTATATACTTATAACTGCCGAGAACAGTGCCTaGCACACAAGGCTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IFGQMRSSSIPSLYILITAENSA*HTRLLV Trigger: CACAAGCAGCCTTGTGTGCCAGGCACTGTTCTCGGC...AGTTATAAGTATATAGAGGGAAGGAATGGAGCTAGATCTCATTTGACCAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | CTGACTTGGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGGTGTGCATAACTTATAACTGGCTATaGAGGCTGGTTTCTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTWNLHSNQHVCTPQVCITYNWL*RLVSWF Trigger: AAACCAAGAAACCAGCCTCCATAGCCAGTTATAAGT...TATGCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR TCA 90 bp | ACCTGTGCACATTTGAGCTTGCAATCCTGGTATACAGTGATGACTAAAATAGACCCACCTGTGCACATTTaGGCTTGCAATCCTGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: TCAHLSLQSWYTVMTKIDPPVHI*ACNPGI Trigger: TATACCAGGATTGCAAGCTCAAATGTGCACAGGTGG...GTCTATTTTAGTCATCACTGTATACCAGGATTGCAAGCTCAAATGTGCACAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | TCACAGAAGACAGTGAAACGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAATTGAGCTTGCAATCCTaGTATACAGTGATGACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQKTVKRISLWRGPHAEKLSLQS*YTVMTK Trigger: TTTAGTCATCACTGTATACCAGGATTGCAAGCTCAA...TTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | CCACATGCAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGCAAGAGTTATCTACCTATCAGTCTCACCTTaGAAAGTGGTCACAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHAEKPVKARWVVARVIYLSVSP*KVVTTF Trigger: AAAAGTTGTGACCACTTTCCAAGGTGAGACTGATAG...GTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR TCA 90 bp | CCTCTATATACTTATAACTGGCTATGGAGGCTGGTTTCTTGGTTTTGCAGGAAGTATCACAGAAGACAGTaGAACGGATTTCTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLYTYNWLWRLVSWFCRKYHRRQ*NGFLSG Trigger: TCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGATA...CTTCCTGCAAAACCAAGAAACCAGCCTCCATAGCCAGTTATAAGTATATAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR GCA 90 bp | CTAGTCAGTCCCAACTACCCTCTACTGCTTCAGTTGCCAACTGATGTTAGTTTTCTCTACTGCTTCAGTTaGCAACTGATGTTAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSPNYPLLLQLPTDVSFLYCFS*QLMLVF Trigger: GAAAACTAACATCAGTTGGCAACTGAAGCAGTAGAG...AAAACTAACATCAGTTGGCAACTGAAGCAGTAGAGGGTAGTTGGGACTGACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CCA 90 bp | CCTATAAAAATTCAGATATCTGGCTCTTCTATAAAAATCAGAATGCTGGCTGGGTTGAGCTTGCAATCCTaGCATACAGTGATAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PIKIQISGSSIKIRMLAGLSLQS*HTVINK Trigger: TTTGTTTATCACTGTATGCCAGGATTGCAAGCTCAA...CCCAGCCAGCATTCTGATTTTTATAGAAGAGCCAGATATCTGAATTTTTATAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 90 bp | ACACTCCGAAGTTGTCGCCGCAGTAGAGGGCCATGTCGGCGGCCGTaGGCGGCTGCGGCGCGGCCGCGGCGAGGGGCGAGCGGGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TLRSCRRSRGPCRRP*AAAARPRRGASGAG Trigger: ACCAGCCCCGCTCGCCCCTCGCCGCGGCCGCGCCGCAGCCGCCCACGGCCGCCGACATGGCCCTCTACTGCGGCGACAACTTCGGAGTGT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 90 bp | GCCTCTGAGATGGAGGTCGGGGAGAACACGCCGCTGGAGGGCAGCTaGGCCCCCTGGATCCCTAGGTGGCGGCTGCCAGGGAGAGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ASEMEVGENTPLEGS*APWIPRWRLPGRAR Trigger: GCGGGCTCTCCCTGGCAGCCGCCACCTAGGGATCCAGGGGGCCCAGCTGCCCTCCAGCGGCGTGTTCTCCCCGACCTCCATCTCAGAGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 90 bp | ATGGAGGTCGGGGAGAACACGCCGCTGGAGGGCAGCTGGGCCCCCTaGATCCCTAGGTGGCGGCTGCCAGGGAGAGCCCGCTGGGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: MEVGENTPLEGSWAP*IPRWRLPGRARWVL Trigger: GAGTACCCAGCGGGCTCTCCCTGGCAGCCGCCACCTAGGGATCCAGGGGGCCCAGCTGCCCTCCAGCGGCGTGTTCTCCCCGACCTCCAT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 90 bp | GAGAACACGCCGCTGGAGGGCAGCTGGGCCCCCTGGATCCCTAGGTaGCGGCTGCCAGGGAGAGCCCGCTGGGTACTCACACTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ENTPLEGSWAPWIPR*RLPGRARWVLTLLL Trigger: CAGCAGCAGTGTGAGTACCCAGCGGGCTCTCCCTGGCAGCCGCCACCTAGGGATCCAGGGGGCCCAGCTGCCCTCCAGCGGCGTGTTCTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 90 bp | TGTCTGCTGAGGCCTCTGAGATGGAGGTCGGGGAGAACACGCCGCTaGAGGGCAGCTGGGCCCCCTGGATCCCTAGGTGGCGGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLLRPLRWRSGRTRR*RAAGPPGSLGGGCQ Trigger: CTGGCAGCCGCCACCTAGGGATCCAGGGGGCCCAGCTGCCCTCCAGCGGCGTGTTCTCCCCGACCTCCATCTCAGAGGCCTCAGCAGACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 90 bp | TGGGCCCCCTGGATCCCTAGGTGGCGGCTGCCAGGGAGAGCCCGCTaGGTACTCACACTGCTGCTGACACTCAAGGAGCTGAGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WAPWIPRWRLPGRAR*VLTLLLTLKELRLL Trigger: CAGCAGCCTCAGCTCCTTGAGTGTCAGCAGCAGTGTGAGTACCCAGCGGGCTCTCCCTGGCAGCCGCCACCTAGGGATCCAGGGGGCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 90 bp | TGGTGCTATTGCTCAGTTGCAAGGTGTCTGCTGAGGCCTCTGAGATaGAGGTCGGGGAGAACACGCCGCTGGAGGGCAGCTGGGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WCYCSVARCLLRPLR*RSGRTRRWRAAGPP Trigger: AGGGGGCCCAGCTGCCCTCCAGCGGCGTGTTCTCCCCGACCTCCATCTCAGAGGCCTCAGCAGACACCTTGCAACTGAGCAATAGCACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | ATGGTCCCCGCCCTCACGGGGCTCACAGGCTACCTATCACAGAAGACAGTGAAACCCAGGAGGCGGAGGTaGCAGCACCACTGCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MVPALTGLTGYLSQKTVKPRRRR*QHHCTP Trigger: TGGAGTGCAGTGGTGCTGCAACCTCCGCCTCCTGGG...TTTCACTGTCTTCTGTGATAGGTAGCCTGTGAGCCCCGTGAGGGCGGGGACCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS GCA 90 bp | GCCCTTCTTCGGACTTTGATGTCCCAGCAGCCACTGTGGAGCCATTaGTGGCCTCAGAGCGGCGCTTTCGCTTCCGACGGAAGTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ALLRTLMSQQPLWSH*WPQSGAFASDGSSH Trigger: ATGGGAACTTCCGTCGGAAGCGAAAGCGCCGCTCTGAGGCCAGCAATGGCTCCACAGTGGCTGCTGGGACATCAAAGTCCGAAGAAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 90 bp | CTTCTTCGGACTTTGATGTCCCAGCAGCCACTGTGGAGCCATTGCTaGCCTCAGAGCGGCGCTTTCGCTTCCGACGGAAGTTCCCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLRTLMSQQPLWSHC*PQSGAFASDGSSHC Trigger: ACAATGGGAACTTCCGTCGGAAGCGAAAGCGCCGCTCTGAGGCCAGCAATGGCTCCACAGTGGCTGCTGGGACATCAAAGTCCGAAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | ATGGTCCCCGCCCTCACGGGGCTCACAGGCTACCTATCACAGAAGACAGTGAAAGCCCTTCTTCGGACTTaGATGTCCCAGCAGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: MVPALTGLTGYLSQKTVKALLRT*MSQQPL Trigger: CAGTGGCTGCTGGGACATCAAAGTCCGAAGAAGGGC...TTTCACTGTCTTCTGTGATAGGTAGCCTGTGAGCCCCGTGAGGGCGGGGACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | TCACAGAAGACAGTGAAACGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAAGCCACTGTGGAGCCATaGCTGGCCTCAGAGCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: SQKTVKRISLWRGPHAEKATVEP*LASERR Trigger: GCGCCGCTCTGAGGCCAGCAATGGCTCCACAGTGGC...TTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS GCA 90 bp | TGGCAGGGAAAGGGCTGTAATAGGAAGATCTCTGGCCGGTGCTATTaGTGGTGCTATTGCTCAGTTGCAAGGTGTCTGCTGAGGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: WQGKGCNRKISGRCY*WCYCSVARCLLRPL Trigger: CAGAGGCCTCAGCAGACACCTTGCAACTGAGCAATAGCACCAGCAATAGCACCGGCCAGAGATCTTCCTATTACAGCCCTTTCCCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS GCA 90 bp | TGGTGCTGGCAGGGAAAGGGCTGTAATAGGAAGATCTCTGGCCGGTaGTATTGCTGGTGCTATTGCTCAGTTGCAAGGTGTCTGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: WCWQGKGCNRKISGR*YCWCYCSVARCLLR Trigger: CCTCAGCAGACACCTTGCAACTGAGCAATAGCACCAGCAATAGCACCGGCCAGAGATCTTCCTATTACAGCCCTTTCCCTGCCAGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS GCA 90 bp | GGAAAGGGCTGTAATAGGAAGATCTCTGGCCGGTGCTATTGCTGGTaGTATTGCTCAGTTGCAAGGTGTCTGCTGAGGCCTCTGAGATGG | + |
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Preference number: 5 (lower is better) Translates to: GKGCNRKISGRCYCW*YCSVARCLLRPLRW Trigger: CCATCTCAGAGGCCTCAGCAGACACCTTGCAACTGAGCAATAGCACCAGCAATAGCACCGGCCAGAGATCTTCCTATTACAGCCCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 90 bp | CAGGGAAAGGGCTGTAATAGGAAGATCTCTGGCCGGTGCTATTGCTaGTGCTATTGCTCAGTTGCAAGGTGTCTGCTGAGGCCTCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: QGKGCNRKISGRCYC*CYCSVARCLLRPLR Trigger: TCTCAGAGGCCTCAGCAGACACCTTGCAACTGAGCAATAGCACCAGCAATAGCACCGGCCAGAGATCTTCCTATTACAGCCCTTTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | CTGACTTGGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGGTGTGCATAGATGAGGCAGTACTCTaGGTGCCCTCCGGAGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: LTWNLHSNQHVCTPQVCIDEAVL*VPSGGS Trigger: AGAGCCTCCGGAGGGCACCAAGAGTACTGCCTCATC...TATGCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS GCA 90 bp | ACTTGGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGGTGTaGATACTCAAGTCTGAGAGTCTGCTCTACACCTCGGAGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: TWNLHSNQHVCTPQV*ILKSESLLYTSEPS Trigger: AGAGGGCTCCGAGGTGTAGAGCAGACTCTCAGACTTGAGTATGCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | CGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAACCTGTAAAAGCTCGCTGGTGTACACACTTGAGCTaGCAATCCTGGCATACAGTG | + |
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Preference number: 5 (lower is better) Translates to: RISLWRGPHAEKPVKARWCTHLS*QSWHTV Trigger: CACTGTATGCCAGGATTGCAAGCTCAAGTGTGTACA...CCAGCGAGCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | ATCTTTGGTCAAATGAGATCTAGCTCCATTCCTTCCCTCTATATACTTATAACTGGCGAGAGCATCCCTTaGGGGGCCAACCCTGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: IFGQMRSSSIPSLYILITGESIP*GANPAA Trigger: AGCCGCAGGGTTGGCCCCCAAAGGGATGCTCTCGCC...AGTTATAAGTATATAGAGGGAAGGAATGGAGCTAGATCTCATTTGACCAAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | CGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAACCTGTAAAAGCTCGCTGGACTATCAGTCTCACCTaGGAAAGTGGTCACAACTTT | + |
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Preference number: 5 (lower is better) Translates to: RISLWRGPHAEKPVKARWTISLT*ESGHNF Trigger: AAAGTTGTGACCACTTTCCAAGGTGAGACTGATAGT...CCAGCGAGCTTTTACAGGTTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | TCACAGAAGACAGTGAAACGGATTTCTCTCTGGAGAGGCCCACATGCAGAGAAATTCACCATGCTAAAGTaGTGGAAAGGGCTGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: SQKTVKRISLWRGPHAEKFTMLK*WKGLLK Trigger: CTTCAGCAGCCCTTTCCACAACTTTAGCATGGTGAA...TTTCTCTGCATGTGGGCCTCTCCAGAGAGAAATCCGTTTCACTGTCTTCTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | ACCTGTGCACATTTGAGCTTGCAATCCTGGTATACAGTGATGACTAAAATAGACCTCTGGCCGGTGCTATaGCTGGTGCTATTGCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: TCAHLSLQSWYTVMTKIDLWPVL*LVLLLS Trigger: ACTGAGCAATAGCACCAGCAATAGCACCGGCCAGAG...GTCTATTTTAGTCATCACTGTATACCAGGATTGCAAGCTCAAATGTGCACAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | CTGACTTGGAATCTGCATTCTAATCAGCATGTGTGCACGCCTCAGGTGTGCATAATGGAGGCTGGTTTCTaGGTTTTGCAGGAAGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: LTWNLHSNQHVCTPQVCIMEAGF*VLQEVE Trigger: TTCTACTTCCTGCAAAACCAAGAAACCAGCCTCCAT...TATGCACACCTGAGGCGTGCACACATGCTGATTAGAATGCAGATTCCAAGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | CTAGTCAGTCCCAACTACCCTCTACTGCTTCAGTTGCCAACTGATGTTAGTTTTGGCACACAAGGCTGCTaGTGCCATTTTATTGCCATT | + |
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Preference number: 5 (lower is better) Translates to: LVSPNYPLLLQLPTDVSFGTQGC*CHFIAI Trigger: AATGGCAATAAAATGGCACAAGCAGCCTTGTGTGCC...AAAACTAACATCAGTTGGCAACTGAAGCAGTAGAGGGTAGTTGGGACTGACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | CCACATGCAGAGAAACCTGTAAAAGCTCGCTGGGTTGTAGCAAGAGTTATCTACTGTGCACATTTGAGCTaGCAATCCTGGTATACAGTG | + |
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Preference number: 5 (lower is better) Translates to: PHAEKPVKARWVVARVIYCAHLS*QSWYTV Trigger: CACTGTATACCAGGATTGCAAGCTCAAATGTGCACA...GTAGATAACTCTTGCTACAACCCAGCGAGCTTTTACAGGTTTCTCTGCATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | ATCTTTGGTCAAATGAGATCTAGCTCCATTCCTTCCCTCTATATACTTATAACTCTGCTGAAGAAAGTGTaGAGACAAGGGGTGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: IFGQMRSSSIPSLYILITLLKKV*RQGVEV Trigger: CACCTCCACCCCTTGTCTCAACACTTTCTTCAGCAG...AGTTATAAGTATATAGAGGGAAGGAATGGAGCTAGATCTCATTTGACCAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | ACCTGTGCACATTTGAGCTTGCAATCCTGGTATACAGTGATGACTAAAATAGACGCTGGTTTCTTGGTTTaGCAGGAAGTAGAATACAGA | + |
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Preference number: 5 (lower is better) Translates to: TCAHLSLQSWYTVMTKIDAGFLV*QEVEYR Trigger: TCTGTATTCTACTTCCTGCAAAACCAAGAAACCAGC...GTCTATTTTAGTCATCACTGTATACCAGGATTGCAAGCTCAAATGTGCACAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS-3UTR CAA 90 bp | ATCTTTGGTCAAATGAGATCTAGCTCCATTCCTTCCCTCTATATACTTATAACTCTATTGCTGGTGCTATaGCTCAGTTGCAAGGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: IFGQMRSSSIPSLYILITLLLVL*LSCKVS Trigger: AGACACCTTGCAACTGAGCAATAGCACCAGCAATAG...AGTTATAAGTATATAGAGGGAAGGAATGGAGCTAGATCTCATTTGACCAAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS GCA 72 bp | CGGGCTGCGCGAAGGGCCGCTGAGAGCAGCCGAAGGTaGCGGCGGCAGGCGGTGGCTGCAGAAAGGGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: RAARRAAESSRR*RRQAVAAERAR Trigger: CCGGGCCCTTTCTGCAGCCACCGCCTGCCGCCGGCACCTTCGGCTGCTCTCAGCGGCCCTTCGCGCAGCCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 72 bp | GGGGCTGGTCTCGCCGCTCGGGCGAGAGCATCCCTTTaGGGGCCAACCCTGCGGCTCCGCCTTCACCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: GAGLAARARASL*GPTLRLRLHPR Trigger: GCGCGGGTGAAGGCGGAGCCGCAGGGTTGGCCCCCAAAGGGATGCTCTCGCCCGAGCGGCGAGACCAGCCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CAA 72 bp | CGGGGCTGGTCTCGCCGCTCGGGCGAGAGCATCCCTTaGGGGGCCAACCCTGCGGCTCCGCCTTCACCCGCG | + |
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Preference number: 6 (lower is better) Translates to: RGWSRRSGESIP*GANPAAPPSPA Trigger: CGCGGGTGAAGGCGGAGCCGCAGGGTTGGCCCCCAAAGGGATGCTCTCGCCCGAGCGGCGAGACCAGCCCCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 72 bp | ATGGAGGTCGGGGAGAACACGCCGCTGGAGGGCAGCTaGGCCCCCTGGATCCCTAGGTGGCGGCTGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: MEVGENTPLEGS*APWIPRWRLPG Trigger: CCCTGGCAGCCGCCACCTAGGGATCCAGGGGGCCCAGCTGCCCTCCAGCGGCGTGTTCTCCCCGACCTCCAT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 72 bp | AGGCCTCTGAGATGGAGGTCGGGGAGAACACGCCGCTaGAGGGCAGCTGGGCCCCCTGGATCCCTAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RPLRWRSGRTRR*RAAGPPGSLGG Trigger: GCCACCTAGGGATCCAGGGGGCCCAGCTGCCCTCCAGCGGCGTGTTCTCCCCGACCTCCATCTCAGAGGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 72 bp | TGGATCCCTAGGTGGCGGCTGCCAGGGAGAGCCCGCTaGGTACTCACACTGCTGCTGACACTCAAGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: WIPRWRLPGRAR*VLTLLLTLKEL Trigger: CAGCTCCTTGAGTGTCAGCAGCAGTGTGAGTACCCAGCGGGCTCTCCCTGGCAGCCGCCACCTAGGGATCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS TCA 72 bp | ACAAGGGGTGGAGGTGAGCATGGGTCCTCCAGGAGATaGGGCAGTACTCTTGGTGCCCTCCGGAGGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: TRGGGEHGSSRR*GSTLGALRRLW Trigger: CCAGAGCCTCCGGAGGGCACCAAGAGTACTGCCTCATCTCCTGGAGGACCCATGCTCACCTCCACCCCTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS GCA 72 bp | CGGACTTTGATGTCCCAGCAGCCACTGTGGAGCCATTaGTGGCCTCAGAGCGGCGCTTTCGCTTCCGACGGA | + |
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Preference number: 6 (lower is better) Translates to: RTLMSQQPLWSH*WPQSGAFASDG Trigger: TCCGTCGGAAGCGAAAGCGCCGCTCTGAGGCCAGCAATGGCTCCACAGTGGCTGCTGGGACATCAAAGTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CAA 72 bp | TCGGACTTTGATGTCCCAGCAGCCACTGTGGAGCCATaGCTGGCCTCAGAGCGGCGCTTTCGCTTCCGACGG | + |
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Preference number: 6 (lower is better) Translates to: SDFDVPAATVEP*LASERRFRFRR Trigger: CCGTCGGAAGCGAAAGCGCCGCTCTGAGGCCAGCAATGGCTCCACAGTGGCTGCTGGGACATCAAAGTCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CAA 90 bp | AGCCCTTCTTCGGACTTTGATGTCCCAGCAGCCACTGTGGAGCCATaGCTGGCCTCAGAGCGGCGCTTTCGCTTCCGACGGAAGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SPSSDFDVPAATVEP*LASERRFRFRRKFP Trigger: TGGGAACTTCCGTCGGAAGCGAAAGCGCCGCTCTGAGGCCAGCAATGGCTCCACAGTGGCTGCTGGGACATCAAAGTCCGAAGAAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS TCA 72 bp | GCATGTGTGCACGCCTCAGGTGTGCATACTCAAGTCTaGGAGTCTGCTCTACACCTCGGAGCCCTCTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: ACVHASGVHTQV*ESALHLGALSG Trigger: CCCCGAGAGGGCTCCGAGGTGTAGAGCAGACTCTCAGACTTGAGTATGCACACCTGAGGCGTGCACACATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 72 bp | ACTTTGATGTCCCAGCAGCCACTGTGGAGCCATTGCTaGCCTCAGAGCGGCGCTTTCGCTTCCGACGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: TLMSQQPLWSHC*PQSGAFASDGS Trigger: ACTTCCGTCGGAAGCGAAAGCGCCGCTCTGAGGCCAGCAATGGCTCCACAGTGGCTGCTGGGACATCAAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CAA 72 bp | CAGACCCCAATCCTGAGGAGAGCCCTTCTTCGGACTTaGATGTCCCAGCAGCCACTGTGGAGCCATTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QTPILRRALLRT*MSQQPLWSHCW Trigger: CCAGCAATGGCTCCACAGTGGCTGCTGGGACATCAAAGTCCGAAGAAGGGCTCTCCTCAGGATTGGGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS CCA 72 bp | GGCTGTAATAGGAAGATCTCTGGCCGGTGCTATTGCTaGTGCTATTGCTCAGTTGCAAGGTGTCTGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GCNRKISGRCYC*CYCSVARCLLR Trigger: CCTCAGCAGACACCTTGCAACTGAGCAATAGCACCAGCAATAGCACCGGCCAGAGATCTTCCTATTACAGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS GCA 72 bp | TGTAATAGGAAGATCTCTGGCCGGTGCTATTGCTGGTaGTATTGCTCAGTTGCAAGGTGTCTGCTGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: CNRKISGRCYCW*YCSVARCLLRP Trigger: AGGCCTCAGCAGACACCTTGCAACTGAGCAATAGCACCAGCAATAGCACCGGCCAGAGATCTTCCTATTACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS GCA 72 bp | AAGGGCTGTAATAGGAAGATCTCTGGCCGGTGCTATTaGTGGTGCTATTGCTCAGTTGCAAGGTGTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: KGCNRKISGRCY*WCYCSVARCLL Trigger: CAGCAGACACCTTGCAACTGAGCAATAGCACCAGCAATAGCACCGGCCAGAGATCTTCCTATTACAGCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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| CDS GCA 72 bp | CAGGGAAAGGGCTGTAATAGGAAGATCTCTGGCCGGTaGTATTGCTGGTGCTATTGCTCAGTTGCAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: QGKGCNRKISGR*YCWCYCSVARC Trigger: ACACCTTGCAACTGAGCAATAGCACCAGCAATAGCACCGGCCAGAGATCTTCCTATTACAGCCCTTTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428390.3 |
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