Pregenerated sensors for FOXG1 (Homo sapiens)
Ensembl gene IDs: ENSG00000176165Ensembl transcript IDs: ENST00000313071.7
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCATATAGTTCCATGATAACTTATAATACTGCACACATGGAAATCTaGCGGCTCTTAGAGATAGACTTGTCAGGTTTGAATGAAATGGCA | + |
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Preference number: 1 (lower is better) Translates to: PYSSMITYNTAHMEI*RLLEIDLSGLNEMA Trigger: TGCCATTTCATTCAAACCTGACAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGCAGTATTATAAGTTATCATGGAACTATATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR-3UTR TCA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTCTTGTCAGGTTTGAATaGAATGGCAAAGCAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: GCSQGLRPPYSSMITYNTLVRFE*NGKAVT Trigger: AGTGACTGCTTTGCCATTTCATTCAAACCTGACAAG...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR CAA 90 bp | TATAATACTGCACACATGGAAATCTGGCGGCTCTTAGAGATAGACTaGTCAGGTTTGAATGAAATGGCAAAGCAGTCACTATTTAGATAC | + |
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Preference number: 2 (lower is better) Translates to: YNTAHMEIWRLLEID*SGLNEMAKQSLFRY Trigger: GTATCTAAATAGTGACTGCTTTGCCATTTCATTCAAACCTGACAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGCAGTATTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR-3UTR TCA 90 bp | GATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTAACAACCCTAGAGACTaGACAAACGTACAGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: DSIEWAVLPTETTFLFVCNNPRD*TNVQKW Trigger: CCATTTCTGTACGTTTGTTCAGTCTCTAGGGTTGTT...ACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR-3UTR GCA 90 bp | ATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTGTTGTTCTCAAGGTCTaGGTCCACCATATAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: IQLNGQCCQLKQLSFLFVVVLKV*VHHIVP Trigger: TGGAACTATATGGTGGACGCAGACCTTGAGAACAAC...AACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR CAA 90 bp | AATTTGACTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATaGCACCTCGCTGACACTCCACACCTTGTTAGAATAATAAACAAC | + |
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Preference number: 2 (lower is better) Translates to: NLTSKPYILQCILPT*HLADTPHLVRIINN Trigger: GTTGTTTATTATTCTAACAAGGTGTGGAGTGTCAGCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAGTCAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR-3UTR CCA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTGCCAAAATAATTTCTTaGGCACCTTTACTACGAATG | + |
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Preference number: 2 (lower is better) Translates to: SLKFMRHLRNTGYIFARFAKIIS*APLLRM Trigger: CATTCGTAGTAAAGGTGCCCAAGAAATTATTTTGGC...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR-3UTR CAA 90 bp | GATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTGTATTCTCCCCACATaGCACCTCGCTGACACTCCA | + |
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Preference number: 3 (lower is better) Translates to: DSIEWAVLPTETTFLFVCCILPT*HLADTP Trigger: TGGAGTGTCAGCGAGGTGCAATGTGGGGAGAATACA...ACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR CCA 72 bp | TCCATGATAACTTATAATACTGCACACATGGAAATCTaGCGGCTCTTAGAGATAGACTTGTCAGGTTTGAAT | + |
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Preference number: 3 (lower is better) Translates to: SMITYNTAHMEI*RLLEIDLSGLN Trigger: ATTCAAACCTGACAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGCAGTATTATAAGTTATCATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR-3UTR CAA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTCTCTTAGAGATAGACTaGTCAGGTTTGAATGAAATG | + |
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Preference number: 3 (lower is better) Translates to: GCSQGLRPPYSSMITYNTLLEID*SGLNEM Trigger: CATTTCATTCAAACCTGACAAGTCTATCTCTAAGAG...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR-3UTR CAA 90 bp | TCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTTGGCCAAAATAATTTCTaGGGCACCTTTACTACGAAT | + |
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Preference number: 3 (lower is better) Translates to: SIEWAVLPTETTFLFVCFGQNNF*GTFTTN Trigger: ATTCGTAGTAAAGGTGCCCAAGAAATTATTTTGGCC...AAAACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR TCA 72 bp | AAAAATGTTTGCAGCATTCATAGCGCAAATTGTACCTaGACTGAAGGGCTCTGTGTGTCTATATATATTACA | + |
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Preference number: 3 (lower is better) Translates to: KNVCSIHSANCT*TEGLCVSIYIT Trigger: TGTAATATATATAGACACACAGAGCCCTTCAGTTCAGGTACAATTTGCGCTATGAATGCTGCAAACATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | TTTGACTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCCCACCGCCCCGGGGGTaGAGCTCCCTCGCTCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: FDFQTLYSTMYSPHIAPRPPPRG*SSLAPN Trigger: GTTGGGAGCGAGGGAGCTTCACCCCCGGGGCGGTGG...GCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAGTCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | CTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCTGACAAGGGTCGAGGGGGCCTaGGGCGACGTGGAGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LPNLIFYNVFSPHCTSLTRVEGA*GDVEED Trigger: GTCCTCCTCCACGTCGCCGCAGGCCCCCTCGACCCT...TGTCAGCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | TCTCCCCATAATTTAGGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGCGGAGCTGTAGGGCATaGGGTGGCTGGGGTAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SPHNLGCSQGLRPPYSSMRSCRA*GGWGRP Trigger: CGGCCTACCCCAGCCACCCCATGCCCTACAGCTCCG...CATGGAACTATATGGTGGACGCAGACCTTGAGAACAACCTAAATTATGGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | TCTCCCCATAATTTAGGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGACGGGATCTCCCCGTTaGCCAGCCGGTCCACGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SPHNLGCSQGLRPPYSSMTGSPR*PAGPRS Trigger: TGAGCGTGGACCGGCTGGTCAACGGGGAGATCCCGT...CATGGAACTATATGGTGGACGCAGACCTTGAGAACAACCTAAATTATGGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTCTAGCGCGGCGGCCGTaGGGTGGTGCGTGGCGTACG | + |
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Preference number: 4 (lower is better) Translates to: SLKFMRHLRNTGYIFARFLARRP*GGAWRT Trigger: CGTACGCCACGCACCACCTCACGGCCGCCGCGCTAG...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTTGGCCCGCGAGGTGGTaGAGCGGCGCCGCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GCSQGLRPPYSSMITYNTWPARW*SGAAAC Trigger: GCAAGCTGCGGCGCCGCTCCACCACCTCGCGGGCCA...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTGCTTGGCCCGCGAGGTaGTGGAGCGGCGCCGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GCSQGLRPPYSSMITYNTAWPAR*WSGAAA Trigger: AGCTGCGGCGCCGCTCCACCACCTCGCGGGCCAAGC...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | CTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCTGACAAGGGCATGGGGTGGCTaGGGTAGGCCGACGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LPNLIFYNVFSPHCTSLTRAWGG*GRPTWC Trigger: GCACCACGTCGGCCTACCCCAGCCACCCCATGCCCT...TGTCAGCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | TTTGACTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCCCGTGGTGCCGCCGATaGACACGTCGTCGCTCGACG | + |
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Preference number: 4 (lower is better) Translates to: FDFQTLYSTMYSPHIAPRPWCRR*TRRRST Trigger: CGTCGAGCGACGACGTGTTCATCGGCGGCACCACGG...GCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAGTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTCTGCTGGCGCGGGGGTaGTGCAGGGACAGGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLKFMRHLRNTGYIFARFLLARG*CRDRKG Trigger: GCCCTTCCTGTCCCTGCACCACCCCCGCGCCAGCAG...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | ATAACTTATAATACTGCACACATGGAAATCTGGCGGCTCTTAGAGATAGACTTGGCGGCGGCCGTGAGGTaGTGCGTGGCGTACGGGATC | + |
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Preference number: 4 (lower is better) Translates to: ITYNTAHMEIWRLLEIDLAAAVR*CVAYGI Trigger: GATCCCGTACGCCACGCACCACCTCACGGCCGCCGC...CAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGCAGTATTATAAGTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | ATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTCGGCCGCGGCGAGGCTaGGGAGACAGCGATCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: IQLNGQCCQLKQLSFLFVRPRRG*GDSDRG Trigger: GCCTCGATCGCTGTCTCCCCAGCCTCGCCGCGGCCG...AACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTGGGAGCAGCAGCTGCTaGGGGCCCTTGTCGTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: SLKFMRHLRNTGYIFARFGSSSC*GPLSSS Trigger: CGACGACGACAAGGGCCCCCAGCAGCTGCTGCTCCC...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | ATAACTTATAATACTGCACACATGGAAATCTGGCGGCTCTTAGAGATAGACTTGAGGAGGACGCGGCCCTaGCGCTCATGGACGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ITYNTAHMEIWRLLEIDLRRTRP*RSWTCC Trigger: GCAGCACGTCCATGAGCGCCAGGGCCGCGTCCTCCT...CAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGCAGTATTATAAGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTGCTCTGCGAAGTCATTaGCGGGTGCGGGACGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GCSQGLRPPYSSMITYNTALRSH*RVRDVG Trigger: CCCCACGTCCCGCACCCGTCAATGACTTCGCAGAGC...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | ATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTGGCGGGAGCAGCAGCTaGTGGGGGCCCTTGTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: IQLNGQCCQLKQLSFLFVGGSSS*WGPLSS Trigger: CGACGACAAGGGCCCCCAGCAGCTGCTGCTCCCGCC...AACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | GATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTGCGGCCGTGAGGTGGTaGGTGGCGTACGGGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: DSIEWAVLPTETTFLFVCAAVRW*VAYGIS Trigger: GGAGATCCCGTACGCCACGCACCACCTCACGGCCGC...ACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | TCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTTCGGCAGCAGCGCAGTTaGACCGCAGGCTCGGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: SIEWAVLPTETTFLFVCFRQQRS*TAGSGA Trigger: AGCGCCCGAGCCTGCGGTCCAACTGCGCTGCTGCCG...AAAACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | TTTGACTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCTGGTGGTTGTCGTTCTaGACCGCCTCGGGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: FDFQTLYSTMYSPHIAPRWWLSF*TASGTR Trigger: CCTGGTGCCCGAGGCGGTCCAGAACGACAACCACCA...GCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAGTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | GATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTGGGTGGTGGCTGTTGTaGTGGCCGTGGCTCGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: DSIEWAVLPTETTFLFVCGWWLL*WPWLAW Trigger: CCACGCGAGCCACGGCCACCACAACAGCCACCACCC...ACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | TTTGACTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCAACTCAAAGTGCTGCTaGCGCGGGGGTGGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FDFQTLYSTMYSPHIAPRNSKCC*RGGGAG Trigger: CCCTGCACCACCCCCGCGCCAGCAGCACTTTGAGTT...GCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAGTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTCGGCCCTGGCGCTCATaGACGTGCTGCTCTGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: GCSQGLRPPYSSMITYNTRPWRS*TCCSAK Trigger: CTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCG...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTCTGTTGTGGTGGCCGTaGCTCGCGTGGTGGTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: GCSQGLRPPYSSMITYNTLLWWP*LAWWLS Trigger: CGACAACCACCACGCGAGCCACGGCCACCACAACAG...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | GATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTGGTGCTGGGGGTGGTaGCTGTTGTGGTGGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: DSIEWAVLPTETTFLFVCWCWGW*LLWWPW Trigger: CCACGGCCACCACAACAGCCACCACCCCCAGCACCA...ACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | ATAACTTATAATACTGCACACATGGAAATCTGGCGGCTCTTAGAGATAGACTTGACAGGAAGGGCGACATaGGCCAGTAGAGGGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: ITYNTAHMEIWRLLEIDLTGRAT*ASRGSR Trigger: CCGGCTCCCTCTACTGGCCCATGTCGCCCTTCCTGT...CAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGCAGTATTATAAGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | CTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCTGACATCAGGCCGTTGGCGGTaGAGAAGGAGTGGTTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LPNLIFYNVFSPHCTSLTSGRWR*RRSGCC Trigger: GCAACAACCACTCCTTCTCCACCGCCAACGGCCTGA...TGTCAGCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTCGCTTCTCGGGGCTCTaGCGGATGGCCATCATGATG | + |
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Preference number: 4 (lower is better) Translates to: GCSQGLRPPYSSMITYNTRFSGL*RMAIMM Trigger: CATCATGATGGCCATCCGGCAGAGCCCCGAGAAGCG...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | TCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTTCCGTGGCTCGCGTGGTaGTTGTCGTTCTGGACCGCC | + |
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Preference number: 4 (lower is better) Translates to: SIEWAVLPTETTFLFVCFPWLAW*LSFWTA Trigger: GGCGGTCCAGAACGACAACCACCACGCGAGCCACGG...AAAACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | TCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTTTGGTGGCTGTTGTGGTaGCCGTGGCTCGCGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SIEWAVLPTETTFLFVCFWWLLW*PWLAWW Trigger: CCACCACGCGAGCCACGGCCACCACAACAGCCACCA...AAAACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | TTTGACTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCGGGGGAAAAAGTAACTaGTCTGGCCCGCGAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: FDFQTLYSTMYSPHIAPRGGKSN*SGPRAG Trigger: ACCTGCTCGCGGGCCAGACCAGTTACTTTTTCCCCC...GCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAGTCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | ATAACTTATAATACTGCACACATGGAAATCTGGCGGCTCTTAGAGATAGACTTGCGTTGTAACTCAAAGTaGTGCTGGCGCGGGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: ITYNTAHMEIWRLLEIDLRCNSK*CWRGGG Trigger: ACCACCCCCGCGCCAGCAGCACTTTGAGTTACAACG...CAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGCAGTATTATAAGTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | ATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTGGCCGTGGCTCGCGTaGTGGTTGTCGTTCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: IQLNGQCCQLKQLSFLFVWPWLA*WLSFWT Trigger: GGTCCAGAACGACAACCACCACGCGAGCCACGGCCA...AACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | ATAACTTATAATACTGCACACATGGAAATCTGGCGGCTCTTAGAGATAGACTTGGCGGTGGAGAAGGAGTaGTTGTTGCCCAGCGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: ITYNTAHMEIWRLLEIDLAVEKE*LLPSEF Trigger: GAACTCGCTGGGCAACAACCACTCCTTCTCCACCGC...CAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGCAGTATTATAAGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | TCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTTCCACGCTCAGGCCGTTaGCGGTGGAGAAGGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SIEWAVLPTETTFLFVCFPRSGR*RWRRSG Trigger: ACCACTCCTTCTCCACCGCCAACGGCCTGAGCGTGG...AAAACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | ATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTCCAGTAGTTGCCCTTaGCCGGGTCGTCGTAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: IQLNGQCCQLKQLSFLFVSSSCP*PGRRSG Trigger: GCCACTACGACGACCCGGGCAAGGGCAACTACTGGA...AACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | GATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTGTAACTCAAAGTGCTaGTGGCGCGGGGGTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSIEWAVLPTETTFLFVCCNSKC*WRGGGA Trigger: TGCACCACCCCCGCGCCAGCAGCACTTTGAGTTACA...ACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | ATAACTTATAATACTGCACACATGGAAATCTGGCGGCTCTTAGAGATAGACTTGGGTAGGCCGACGTGGTaGCGTTGTAACTCAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ITYNTAHMEIWRLLEIDLGRPTW*RCNSKC Trigger: GCACTTTGAGTTACAACGGCACCACGTCGGCCTACC...CAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGCAGTATTATAAGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTATGGACGTGCTGCTCTaGGAAGTCATTGACGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCSQGLRPPYSSMITYNTMDVLL*EVIDGC Trigger: GCACCCGTCAATGACTTCGCAGAGCAGCACGTCCAT...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTTGGCGCTCATGGACGTaGTGCTCTGCGAAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SLKFMRHLRNTGYIFARFWRSWT*CSAKSL Trigger: CAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCA...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTTGGGGTAGGCCGACGTaGTGCCGTTGTAACTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLKFMRHLRNTGYIFARFWGRPT*CRCNSK Trigger: CTTTGAGTTACAACGGCACCACGTCGGCCTACCCCA...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | GATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTCGCTCATGGACGTGCTaGTCTGCGAAGTCATTGACG | + |
|
Preference number: 4 (lower is better) Translates to: DSIEWAVLPTETTFLFVCRSWTC*SAKSLT Trigger: CGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCG...ACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | ATAACTTATAATACTGCACACATGGAAATCTGGCGGCTCTTAGAGATAGACTTGGTATTCTCCCCACATTaGACCTCGCTGACACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITYNTAHMEIWRLLEIDLVFSPH*TSLTLH Trigger: GTGGAGTGTCAGCGAGGTGCAATGTGGGGAGAATAC...CAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGCAGTATTATAAGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | CTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCTGACAGCACACATGGAAATCTaGCGGCTCTTAGAGATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPNLIFYNVFSPHCTSLTAHMEI*RLLEID Trigger: GTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGC...TGTCAGCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR CAA 72 bp | GCACACATGGAAATCTGGCGGCTCTTAGAGATAGACTaGTCAGGTTTGAATGAAATGGCAAAGCAGTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: AHMEIWRLLEID*SGLNEMAKQSL Trigger: TAGTGACTGCTTTGCCATTTCATTCAAACCTGACAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | ATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTGCGGCTTCTCGTACTTaGCGTTCTTCTTCTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IQLNGQCCQLKQLSFLFVAASRT*RSSSRP Trigger: AGGGCGAGAAGAAGAACGGCAAGTACGAGAAGCCGC...AACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTAGAAGGAGTGGTTGTTaGCCAGCGAGTTCTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GCSQGLRPPYSSMITYNTRRSGC*PASSES Trigger: TGACTCAGAACTCGCTGGGCAACAACCACTCCTTCT...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | TCTCCCCATAATTTAGGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGTTGAATGGGCAGTGTTaGCAACTGAAACAACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPHNLGCSQGLRPPYSSMLNGQC*QLKQLS Trigger: GGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAA...CATGGAACTATATGGTGGACGCAGACCTTGAGAACAACCTAAATTATGGGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | CTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCTGACACTTGTCAGGTTTGAATaGAATGGCAAAGCAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LPNLIFYNVFSPHCTSLTLVRFE*NGKAVT Trigger: AGTGACTGCTTTGCCATTTCATTCAAACCTGACAAG...TGTCAGCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR CAA 72 bp | TCCAAACCTTATATTCTACAATGTATTCTCCCCACATaGCACCTCGCTGACACTCCACACCTTGTTAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SKPYILQCILPT*HLADTPHLVRI Trigger: TATTCTAACAAGGTGTGGAGTGTCAGCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | TTTGACTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCAAATTGTACCTGAACTaGAGGGCTCTGTGTGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FDFQTLYSTMYSPHIAPRKLYLN*RALCVY Trigger: ATAGACACACAGAGCCCTTCAGTTCAGGTACAATTT...GCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAGTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | TCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTTAGCGCAAATTGTACCTaGACTGAAGGGCTCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIEWAVLPTETTFLFVCFSANCT*TEGLCV Trigger: CACACAGAGCCCTTCAGTTCAGGTACAATTTGCGCT...AAAACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTAACAACCCTAGAGACTaGACAAACGTACAGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLKFMRHLRNTGYIFARFNNPRD*TNVQKW Trigger: CCATTTCTGTACGTTTGTTCAGTCTCTAGGGTTGTT...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTACAAACACGGGCATATaGCCACAGTATCACAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLKFMRHLRNTGYIFARFTNTGI*PQYHNQ Trigger: TTGATTGTGATACTGTGGTCATATGCCCGTGTTTGT...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | CTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCTGACACTTACAGGTATCAGCTaGAAAGCCTATACTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPNLIFYNVFSPHCTSLTLTGIS*KAYTLF Trigger: AAACAAAGTATAGGCTTTTCAGCTGATACCTGTAAG...TGTCAGCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | TTTGACTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCAAACATTTTTGTAAGTaGCAAACACGGGCATATGAC | + |
|
Preference number: 4 (lower is better) Translates to: FDFQTLYSTMYSPHIAPRKHFCK*QTRAYD Trigger: GTCATATGCCCGTGTTTGTCACTTACAAAAATGTTT...GCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAGTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | TCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTTGTTGTTCTCAAGGTCTaGGTCCACCATATAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIEWAVLPTETTFLFVCFVVLKV*VHHIVP Trigger: TGGAACTATATGGTGGACGCAGACCTTGAGAACAAC...AAAACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | TTTGACTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCAATTTATGCGGCATTTaGGCAACACAGGTTACATAT | + |
|
Preference number: 4 (lower is better) Translates to: FDFQTLYSTMYSPHIAPRNLCGI*ATQVTY Trigger: ATATGTAACCTGTGTTGCGCAAATGCCGCATAAATT...GCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAGTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR GCA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTAATCACTCAAATTTATaGGGCATTTGCGCAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLKFMRHLRNTGYIFARFNHSNL*GICATQ Trigger: CTGTGTTGCGCAAATGCCGCATAAATTTGAGTGATT...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR TCA 90 bp | ATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTCCTGATTTTGATGTGTaGAATAATCAGACAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IQLNGQCCQLKQLSFLFVPDFDV*NNQTVP Trigger: GGGGACTGTCTGATTATTTCACACATCAAAATCAGG...AACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | ATAACTTATAATACTGCACACATGGAAATCTGGCGGCTCTTAGAGATAGACTTGGCCAAAATAATTTCTTaGGCACCTTTACTACGAATG | + |
|
Preference number: 4 (lower is better) Translates to: ITYNTAHMEIWRLLEIDLAKIIS*APLLRM Trigger: CATTCGTAGTAAAGGTGCCCAAGAAATTATTTTGGC...CAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGCAGTATTATAAGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | ATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTCTGATTCAATTGAATaGGCAGTGTTGCCAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IQLNGQCCQLKQLSFLFVSDSIE*AVLPTE Trigger: TTCAGTTGGCAACACTGCCCATTCAATTGAATCAGA...AACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CCA 90 bp | GATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTAATGTATTAAAGGGTTaGAAGAAGACCCCTGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSIEWAVLPTETTFLFVCNVLKG*KKTPDF Trigger: AAAATCAGGGGTCTTCTTCCAACCCTTTAATACATT...ACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| 3UTR CAA 72 bp | AATTTATGCGGCATTTGCGCAACACAGGTTACATATTaGCAAGGTTTACCTATAAGTACAATAGGTATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLCGICATQVTY*QGLPISTIGIN Trigger: GTTAATACCTATTGTACTTATAGGTAAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS GCA 90 bp | AGGCCGCAGGGCACCGAGGCGGCTAGCGCGGCGGCCGTGAGGTGGTaGGTGGCGTACGGGATCTCCCCGTTGACCAGCCGGTCCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPQGTEAASAAAVRW*VAYGISPLTSRSTL Trigger: GAGCGTGGACCGGCTGGTCAACGGGGAGATCCCGTACGCCACGCACCACCTCACGGCCGCCGCGCTAGCCGCCTCGGTGCCCTGCGGCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 90 bp | GACAGGCCGCAGGGCACCGAGGCGGCTAGCGCGGCGGCCGTGAGGTaGTGCGTGGCGTACGGGATCTCCCCGTTGACCAGCCGGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: DRPQGTEAASAAAVR*CVAYGISPLTSRST Trigger: CGTGGACCGGCTGGTCAACGGGGAGATCCCGTACGCCACGCACCACCTCACGGCCGCCGCGCTAGCCGCCTCGGTGCCCTGCGGCCTGTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 90 bp | AGGGGGCCTGCGGCGACGTGGAGGAGGACGCGGCCCTGGCGCTCATaGACGTGCTGCTCTGCGAAGTCATTGACGGGTGCGGGACGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGPAATWRRTRPWRS*TCCSAKSLTGAGRG Trigger: CCCACGTCCCGCACCCGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCGCGTCCTCCTCCACGTCGCCGCAGGCCCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 90 bp | GCAGGGTCGAGGGGGCCTGCGGCGACGTGGAGGAGGACGCGGCCCTaGCGCTCATGGACGTGCTGCTCTGCGAAGTCATTGACGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGSRGPAATWRRTRP*RSWTCCSAKSLTGA Trigger: CGCACCCGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCGCGTCCTCCTCCACGTCGCCGCAGGCCCCCTCGACCCTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 90 bp | TGGTGGTGGTGGTGGTGCTGGGGGTGGTGGCTGTTGTGGTGGCCGTaGCTCGCGTGGTGGTTGTCGTTCTGGACCGCCTCGGGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWWWCWGWWLLWWP*LAWWLSFWTASGTR Trigger: CCTGGTGCCCGAGGCGGTCCAGAACGACAACCACCACGCGAGCCACGGCCACCACAACAGCCACCACCCCCAGCACCACCACCACCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 90 bp | TGGTGGTGGTGGTGGTGGTGGTGCTGGGGGTGGTGGCTGTTGTGGTaGCCGTGGCTCGCGTGGTGGTTGTCGTTCTGGACCGCCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WWWWWWWCWGWWLLW*PWLAWWLSFWTASG Trigger: GCCCGAGGCGGTCCAGAACGACAACCACCACGCGAGCCACGGCCACCACAACAGCCACCACCCCCAGCACCACCACCACCACCACCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS GCA 90 bp | CCTGCGGCGACGTGGAGGAGGACGCGGCCCTGGCGCTCATGGACGTaGTGCTCTGCGAAGTCATTGACGGGTGCGGGACGTGGGGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PAATWRRTRPWRSWT*CSAKSLTGAGRGGK Trigger: TTTTCCCCCACGTCCCGCACCCGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCGCGTCCTCCTCCACGTCGCCGCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS GCA 90 bp | GGCAAAGAGGGTCTTAAAGACTCACAGGGCAGGGTCGAGGGGGCCTaGGGCGACGTGGAGGAGGACGCGGCCCTGGCGCTCATGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: GKEGLKDSQGRVEGA*GDVEEDAALALMDV Trigger: CACGTCCATGAGCGCCAGGGCCGCGTCCTCCTCCACGTCGCCGCAGGCCCCCTCGACCCTGCCCTGTGAGTCTTTAAGACCCTCTTTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS GCA 90 bp | GCGGCGACGTGGAGGAGGACGCGGCCCTGGCGCTCATGGACGTGCTaGTCTGCGAAGTCATTGACGGGTGCGGGACGTGGGGGAAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AATWRRTRPWRSWTC*SAKSLTGAGRGGKS Trigger: ACTTTTTCCCCCACGTCCCGCACCCGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCGCGTCCTCCTCCACGTCGCCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS TCA 90 bp | GGACGCGGCCCTGGCGCTCATGGACGTGCTGCTCTGCGAAGTCATTaGCGGGTGCGGGACGTGGGGGAAAAAGTAACTGGTCTGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGPGAHGRAALRSH*RVRDVGEKVTGLAR Trigger: GCGGGCCAGACCAGTTACTTTTTCCCCCACGTCCCGCACCCGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCGCGTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS GCA 90 bp | GCCGGTCCACGCTCAGGCCGTTGGCGGTGGAGAAGGAGTGGTTGTTaGCCAGCGAGTTCTGAGTCAACACGGAGCTGTAGGGCATGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGPRSGRWRWRRSGC*PASSESTRSCRAWG Trigger: ACCCCATGCCCTACAGCTCCGTGTTGACTCAGAACTCGCTGGGCAACAACCACTCCTTCTCCACCGCCAACGGCCTGAGCGTGGACCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 90 bp | TGGTGGCTGTTGTGGTGGCCGTGGCTCGCGTGGTGGTTGTCGTTCTaGACCGCCTCGGGCACCAGGCTGTTGATGCTGAACGAGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: WWLLWWPWLAWWLSF*TASGTRLLMLNEDL Trigger: CAAGTCCTCGTTCAGCATCAACAGCCTGGTGCCCGAGGCGGTCCAGAACGACAACCACCACGCGAGCCACGGCCACCACAACAGCCACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 90 bp | CCAGCGAGTTCTGAGTCAACACGGAGCTGTAGGGCATGGGGTGGCTaGGGTAGGCCGACGTGGTGCCGTTGTAACTCAAAGTGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PASSESTRSCRAWGG*GRPTWCRCNSKCCW Trigger: CCAGCAGCACTTTGAGTTACAACGGCACCACGTCGGCCTACCCCAGCCACCCCATGCCCTACAGCTCCGTGTTGACTCAGAACTCGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 90 bp | GGTTGTTGCCCAGCGAGTTCTGAGTCAACACGGAGCTGTAGGGCATaGGGTGGCTGGGGTAGGCCGACGTGGTGCCGTTGTAACTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GCCPASSESTRSCRA*GGWGRPTWCRCNSK Trigger: CTTTGAGTTACAACGGCACCACGTCGGCCTACCCCAGCCACCCCATGCCCTACAGCTCCGTGTTGACTCAGAACTCGCTGGGCAACAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTCCGGCAGCAGCGCAGTaGGACCGCAGGCTCGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GCSQGLRPPYSSMITYNTPAAAQ*DRRLGR Trigger: GCGCCCGAGCCTGCGGTCCAACTGCGCTGCTGCCGG...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTGAGCGGCGCCGCAGCTaGCCCGTGGTGCCGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: GCSQGLRPPYSSMITYNTERRRS*PVVPPM Trigger: CATCGGCGGCACCACGGGCAAGCTGCGGCGCCGCTC...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
||
| CDS-3UTR CAA 90 bp | ATAACTTATAATACTGCACACATGGAAATCTGGCGGCTCTTAGAGATAGACTTGAGGCGCGCACCGCGCTaGAAGGCCAGCTTGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ITYNTAHMEIWRLLEIDLRRAPR*KASLAR Trigger: GCGGGCCAAGCTGGCCTTCAAGCGCGGTGCGCGCCT...CAAGTCTATCTCTAAGAGCCGCCAGATTTCCATGTGTGCAGTATTATAAGTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
||
| CDS-3UTR CAA 90 bp | CTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCTGACATCCACGCTCAGGCCGTaGGCGGTGGAGAAGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPNLIFYNVFSPHCTSLTSTLRP*AVEKEW Trigger: CCACTCCTTCTCCACCGCCAACGGCCTGAGCGTGGA...TGTCAGCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | CTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCTGACATACGGGATCTCCCCGTaGACCAGCCGGTCCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPNLIFYNVFSPHCTSLTYGISP*TSRSTL Trigger: GAGCGTGGACCGGCTGGTCAACGGGGAGATCCCGTA...TGTCAGCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | TCTCCCCATAATTTAGGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGGGCGGCTTCTCGTACTaGCCGTTCTTCTTCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPHNLGCSQGLRPPYSSMGGFSY*PFFFSP Trigger: GGGCGAGAAGAAGAACGGCAAGTACGAGAAGCCGCC...CATGGAACTATATGGTGGACGCAGACCTTGAGAACAACCTAAATTATGGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTTGGCCCGCGAGCAGGTaGACGGAGCAGGGGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLKFMRHLRNTGYIFARFWPASR*TEQGLR Trigger: CCTCAACCCCTGCTCCGTCAACCTGCTCGCGGGCCA...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTTGGCTCGCGTGGTGGTaGTCGTTCTGGACCGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GCSQGLRPPYSSMITYNTWLAWW*SFWTAS Trigger: CGAGGCGGTCCAGAACGACAACCACCACGCGAGCCA...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | ATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTGCTCTGCGAAGTCATaGACGGGTGCGGGACGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IQLNGQCCQLKQLSFLFVCSAKS*TGAGRG Trigger: CCCACGTCCCGCACCCGTCAATGACTTCGCAGAGCA...AACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | ATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTCGGGCACCAGGCTGTaGATGCTGAACGAGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: IQLNGQCCQLKQLSFLFVSGTRL*MLNEDL Trigger: CAAGTCCTCGTTCAGCATCAACAGCCTGGTGCCCGA...AACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTTGTATTCTCCCCACATaGCACCTCGCTGACACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLKFMRHLRNTGYIFARFCILPT*HLADTP Trigger: TGGAGTGTCAGCGAGGTGCAATGTGGGGAGAATACA...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTCCCCTTCTGATTCAATaGAATGGGCAGTGTTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SLKFMRHLRNTGYIFARFPLLIQ*NGQCCQ Trigger: TTGGCAACACTGCCCATTCAATTGAATCAGAAGGGG...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | TCTCCCCATAATTTAGGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGAGGCAATCGTTAATTTaGTCCCCTTCTGATTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: SPHNLGCSQGLRPPYSSMRQSLI*SPSDSI Trigger: AATTGAATCAGAAGGGGACAAAATTAACGATTGCCT...CATGGAACTATATGGTGGACGCAGACCTTGAGAACAACCTAAATTATGGGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | TCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTTATGCTGAACGAGGACTaGGGGATCATTTTCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIEWAVLPTETTFLFVCFMLNED*GIIFTS Trigger: AGAGGTGAAAATGATCCCCAAGTCCTCGTTCAGCAT...AAAACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | CTTCCAAACCTTATATTCTACAATGTATTCTCCCCACATTGCACCTCGCTGACAATTAGAACTCTTTCATaGTGGGTAAACAGCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LPNLIFYNVFSPHCTSLTIRTLS*WVNSHK Trigger: TTTGTGGCTGTTTACCCACAATGAAAGAGTTCTAAT...TGTCAGCGAGGTGCAATGTGGGGAGAATACATTGTAGAATATAAGGTTTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | GGTTGTTCTCAAGGTCTGCGTCCACCATATAGTTCCATGATAACTTATAATACTGGCCAAAATAATTTCTaGGGCACCTTTACTACGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GCSQGLRPPYSSMITYNTGQNNF*GTFTTN Trigger: ATTCGTAGTAAAGGTGCCCAAGAAATTATTTTGGCC...AGTATTATAAGTTATCATGGAACTATATGGTGGACGCAGACCTTGAGAACAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | TCACTCAAATTTATGCGGCATTTGCGCAACACAGGTTACATATTTGCAAGGTTTAAATTTATGCGGCATTaGCGCAACACAGGTTACATA | + |
|
Preference number: 5 (lower is better) Translates to: SLKFMRHLRNTGYIFARFKFMRH*RNTGYI Trigger: TATGTAACCTGTGTTGCGCAAATGCCGCATAAATTT...AAACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATAAATTTGAGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | ATTCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTATTGAATGGGCAGTGTaGCCAACTGAAACAACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IQLNGQCCQLKQLSFLFVIEWAV*PTETTF Trigger: GAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAAT...AACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS-3UTR CAA 90 bp | TCAATTGAATGGGCAGTGTTGCCAACTGAAACAACTTTCCTTTTTGTTTGTTTTCTCTTAGAGATAGACTaGTCAGGTTTGAATGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: SIEWAVLPTETTFLFVCFLLEID*SGLNEM Trigger: CATTTCATTCAAACCTGACAAGTCTATCTCTAAGAG...AAAACAAACAAAAAGGAAAGTTGTTTCAGTTGGCAACACTGCCCATTCAATTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS GCA 72 bp | GGCACCGAGGCGGCTAGCGCGGCGGCCGTGAGGTGGTaGGTGGCGTACGGGATCTCCCCGTTGACCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GTEAASAAAVRW*VAYGISPLTSR Trigger: CCGGCTGGTCAACGGGGAGATCCCGTACGCCACGCACCACCTCACGGCCGCCGCGCTAGCCGCCTCGGTGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CAA 90 bp | GTGAGGCCGGTGGAGGTGAGGCGCGCACCGCGCTTGAAGGCCAGCTaGGCCCGCGAGGTGGTGGAGCGGCGCCGCAGCTTGCCCGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VRPVEVRRAPRLKAS*AREVVERRRSLPVV Trigger: CACCACGGGCAAGCTGCGGCGCCGCTCCACCACCTCGCGGGCCAAGCTGGCCTTCAAGCGCGGTGCGCGCCTCACCTCCACCGGCCTCAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 72 bp | CAGGGCACCGAGGCGGCTAGCGCGGCGGCCGTGAGGTaGTGCGTGGCGTACGGGATCTCCCCGTTGACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QGTEAASAAAVR*CVAYGISPLTS Trigger: GCTGGTCAACGGGGAGATCCCGTACGCCACGCACCACCTCACGGCCGCCGCGCTAGCCGCCTCGGTGCCCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CAA 90 bp | CGGTCCATGAAGGTGAGGCCGGTGGAGGTGAGGCGCGCACCGCGCTaGAAGGCCAGCTTGGCCCGCGAGGTGGTGGAGCGGCGCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSMKVRPVEVRRAPR*KASLAREVVERRRS Trigger: GCTGCGGCGCCGCTCCACCACCTCGCGGGCCAAGCTGGCCTTCAAGCGCGGTGCGCGCCTCACCTCCACCGGCCTCACCTTCATGGACCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CAA 72 bp | AAGGTGAGGCCGGTGGAGGTGAGGCGCGCACCGCGCTaGAAGGCCAGCTTGGCCCGCGAGGTGGTGGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: KVRPVEVRRAPR*KASLAREVVER Trigger: CCGCTCCACCACCTCGCGGGCCAAGCTGGCCTTCAAGCGCGGTGCGCGCCTCACCTCCACCGGCCTCACCTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CAA 90 bp | AGCGCGGCGGCCGTGAGGTGGTGCGTGGCGTACGGGATCTCCCCGTaGACCAGCCGGTCCACGCTCAGGCCGTTGGCGGTGGAGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SAAAVRWCVAYGISP*TSRSTLRPLAVEKE Trigger: CTCCTTCTCCACCGCCAACGGCCTGAGCGTGGACCGGCTGGTCAACGGGGAGATCCCGTACGCCACGCACCACCTCACGGCCGCCGCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CAA 72 bp | GCCGTGAGGTGGTGCGTGGCGTACGGGATCTCCCCGTaGACCAGCCGGTCCACGCTCAGGCCGTTGGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AVRWCVAYGISP*TSRSTLRPLAV Trigger: CACCGCCAACGGCCTGAGCGTGGACCGGCTGGTCAACGGGGAGATCCCGTACGCCACGCACCACCTCACGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS TCA 72 bp | TGGAGCGGCGCCGCAGCTTGCCCGTGGTGCCGCCGATaGACACGTCGTCGCTCGACGGGTCCAGCATCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WSGAAACPWCRR*TRRRSTGPASS Trigger: ACTGGATGCTGGACCCGTCGAGCGACGACGTGTTCATCGGCGGCACCACGGGCAAGCTGCGGCGCCGCTCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 72 bp | GCGGCGACGTGGAGGAGGACGCGGCCCTGGCGCTCATaGACGTGCTGCTCTGCGAAGTCATTGACGGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: AATWRRTRPWRS*TCCSAKSLTGA Trigger: CGCACCCGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCGCGTCCTCCTCCACGTCGCCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 72 bp | AGGGGGCCTGCGGCGACGTGGAGGAGGACGCGGCCCTaGCGCTCATGGACGTGCTGCTCTGCGAAGTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: RGPAATWRRTRP*RSWTCCSAKSL Trigger: CAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCGCGTCCTCCTCCACGTCGCCGCAGGCCCCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS GCA 72 bp | TGGAGGAGGACGCGGCCCTGGCGCTCATGGACGTGCTaGTCTGCGAAGTCATTGACGGGTGCGGGACGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WRRTRPWRSWTC*SAKSLTGAGRG Trigger: CCCACGTCCCGCACCCGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCGCGTCCTCCTCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS GCA 72 bp | GGTAGGCCGACGTGGTGCCGTTGTAACTCAAAGTGCTaGTGGCGCGGGGGTGGTGCAGGGACAGGAAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GRPTWCRCNSKC*WRGGGAGTGRA Trigger: CGCCCTTCCTGTCCCTGCACCACCCCCGCGCCAGCAGCACTTTGAGTTACAACGGCACCACGTCGGCCTACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS GCA 72 bp | GAGGACGCGGCCCTGGCGCTCATGGACGTGCTGCTCTaGGAAGTCATTGACGGGTGCGGGACGTGGGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: EDAALALMDVLL*EVIDGCGTWGK Trigger: TTTCCCCCACGTCCCGCACCCGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCGCGTCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS GCA 72 bp | ACGTGGAGGAGGACGCGGCCCTGGCGCTCATGGACGTaGTGCTCTGCGAAGTCATTGACGGGTGCGGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: TWRRTRPWRSWT*CSAKSLTGAGR Trigger: ACGTCCCGCACCCGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCGCGTCCTCCTCCACGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 72 bp | TGGTGGTGGTGGTGCTGGGGGTGGTGGCTGTTGTGGTaGCCGTGGCTCGCGTGGTGGTTGTCGTTCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: WWWWCWGWWLLW*PWLAWWLSFWT Trigger: GGTCCAGAACGACAACCACCACGCGAGCCACGGCCACCACAACAGCCACCACCCCCAGCACCACCACCACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 72 bp | TGGTGGTGGTGGTGGTGCTGGGGGTGGTGGCTGTTGTaGTGGCCGTGGCTCGCGTGGTGGTTGTCGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WWWWWCWGWWLL*WPWLAWWLSFW Trigger: CCAGAACGACAACCACCACGCGAGCCACGGCCACCACAACAGCCACCACCCCCAGCACCACCACCACCACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS GCA 72 bp | TGGGGTAGGCCGACGTGGTGCCGTTGTAACTCAAAGTaGTGCTGGCGCGGGGGTGGTGCAGGGACAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WGRPTWCRCNSK*CWRGGGAGTGR Trigger: CCTTCCTGTCCCTGCACCACCCCCGCGCCAGCAGCACTTTGAGTTACAACGGCACCACGTCGGCCTACCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 72 bp | AGGCCGACGTGGTGCCGTTGTAACTCAAAGTGCTGCTaGCGCGGGGGTGGTGCAGGGACAGGAAGGGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: RPTWCRCNSKCC*RGGGAGTGRAT Trigger: TGTCGCCCTTCCTGTCCCTGCACCACCCCCGCGCCAGCAGCACTTTGAGTTACAACGGCACCACGTCGGCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 72 bp | AGCTGTAGGGCATGGGGTGGCTGGGGTAGGCCGACGTaGTGCCGTTGTAACTCAAAGTGCTGCTGGCGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SCRAWGGWGRPT*CRCNSKCCWRG Trigger: CCCGCGCCAGCAGCACTTTGAGTTACAACGGCACCACGTCGGCCTACCCCAGCCACCCCATGCCCTACAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CAA 90 bp | AGGACGCGGCCCTGGCGCTCATGGACGTGCTGCTCTGCGAAGTCATaGACGGGTGCGGGACGTGGGGGAAAAAGTAACTGGTCTGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RTRPWRSWTCCSAKS*TGAGRGGKSNWSGP Trigger: CGGGCCAGACCAGTTACTTTTTCCCCCACGTCCCGCACCCGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCGCGTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 72 bp | CCAGCGAGTTCTGAGTCAACACGGAGCTGTAGGGCATaGGGTGGCTGGGGTAGGCCGACGTGGTGCCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PASSESTRSCRA*GGWGRPTWCRC Trigger: ACAACGGCACCACGTCGGCCTACCCCAGCCACCCCATGCCCTACAGCTCCGTGTTGACTCAGAACTCGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS GCA 72 bp | CGCTCAGGCCGTTGGCGGTGGAGAAGGAGTGGTTGTTaGCCAGCGAGTTCTGAGTCAACACGGAGCTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSGRWRWRRSGC*PASSESTRSCR Trigger: CCTACAGCTCCGTGTTGACTCAGAACTCGCTGGGCAACAACCACTCCTTCTCCACCGCCAACGGCCTGAGCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CAA 72 bp | CCCTGGCGCTCATGGACGTGCTGCTCTGCGAAGTCATaGACGGGTGCGGGACGTGGGGGAAAAAGTAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: PWRSWTCCSAKS*TGAGRGGKSNW Trigger: CCAGTTACTTTTTCCCCCACGTCCCGCACCCGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS TCA 72 bp | CCTGGCGCTCATGGACGTGCTGCTCTGCGAAGTCATTaGCGGGTGCGGGACGTGGGGGAAAAAGTAACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGAHGRAALRSH*RVRDVGEKVTG Trigger: ACCAGTTACTTTTTCCCCCACGTCCCGCACCCGTCAATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CCA 72 bp | TCTGAGTCAACACGGAGCTGTAGGGCATGGGGTGGCTaGGGTAGGCCGACGTGGTGCCGTTGTAACTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SESTRSCRAWGG*GRPTWCRCNSK Trigger: CTTTGAGTTACAACGGCACCACGTCGGCCTACCCCAGCCACCCCATGCCCTACAGCTCCGTGTTGACTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CAA 90 bp | CTCGCGTGGTGGTTGTCGTTCTGGACCGCCTCGGGCACCAGGCTGTaGATGCTGAACGAGGACTTGGGGATCATTTTCACCTCTTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: LAWWLSFWTASGTRL*MLNEDLGIIFTSFL Trigger: TAGGAAAGAGGTGAAAATGATCCCCAAGTCCTCGTTCAGCATCAACAGCCTGGTGCCCGAGGCGGTCCAGAACGACAACCACCACGCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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| CDS CAA 72 bp | TGGTTGTCGTTCTGGACCGCCTCGGGCACCAGGCTGTaGATGCTGAACGAGGACTTGGGGATCATTTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: WLSFWTASGTRL*MLNEDLGIIFT Trigger: GGTGAAAATGATCCCCAAGTCCTCGTTCAGCATCAACAGCCTGGTGCCCGAGGCGGTCCAGAACGACAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313071.7 |
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