Pregenerated sensors for FOXE3 (Homo sapiens)
Ensembl gene IDs: ENSG00000186790Ensembl transcript IDs: ENST00000335071.4
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAAAGGCTTGGAACTCACCAGGAAACCTGGGGTATGGACTCACTaGAGGCGAGTCAGCTCCGGGGCAAGGGACCCACAGACAGCGCTG | + |
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Preference number: 1 (lower is better) Translates to: SKGLELTRKPGVWTH*RRVSSGARDPQTAL Trigger: CAGCGCTGTCTGTGGGTCCCTTGCCCCGGAGCTGACTCGCCTCCAGTGAGTCCATACCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR CCA 90 bp | GATCTGGCTTCCAAAGGCTTGGAACTCACCAGGAAACCTGGGGTATaGACTCACTGGAGGCGAGTCAGCTCCGGGGCAAGGGACCCACAG | + |
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Preference number: 1 (lower is better) Translates to: DLASKGLELTRKPGV*THWRRVSSGARDPQ Trigger: CTGTGGGTCCCTTGCCCCGGAGCTGACTCGCCTCCAGTGAGTCCATACCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR TCA 90 bp | GCCCACCAACTCCCCTTTCAGTCAGGAGCCCTGGTGCTGCCTGTCTaGAATCTCCAAGAAGTGTCCTCAGGGCGTGAAGAAGGCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: AHQLPFQSGALVLPV*NLQEVSSGREEGSQ Trigger: CTGGCTGCCTTCTTCACGCCCTGAGGACACTTCTTGGAGATTTCAGACAGGCAGCACCAGGGCTCCTGACTGAAAGGGGAGTTGGTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR CCA 90 bp | GGTGGAGGAGGCGGCTTGGGATCACAGATCTGGCTTCCAAAGGCTTaGAACTCACCAGGAAACCTGGGGTATGGACTCACTGGAGGCGAG | + |
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Preference number: 1 (lower is better) Translates to: GGGGGLGSQIWLPKA*NSPGNLGYGLTGGE Trigger: CTCGCCTCCAGTGAGTCCATACCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATCTGTGATCCCAAGCCGCCTCCTCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR CCA 90 bp | GATCACAGATCTGGCTTCCAAAGGCTTGGAACTCACCAGGAAACCTaGGGTATGGACTCACTGGAGGCGAGTCAGCTCCGGGGCAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: DHRSGFQRLGTHQET*GMDSLEASQLRGKG Trigger: TCCCTTGCCCCGGAGCTGACTCGCCTCCAGTGAGTCCATACCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATCTGTGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR CCA 90 bp | GGAGTGTCGGAAAAACATGAGAGAAGGTTGATGAAGTACAGTCGGTaGAGGAGGCGGCTTGGGATCACAGATCTGGCTTCCAAAGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: GVSEKHERRLMKYSR*RRRLGITDLASKGL Trigger: CAAGCCTTTGGAAGCCAGATCTGTGATCCCAAGCCGCCTCCTCCACCGACTGTACTTCATCAACCTTCTCTCATGTTTTTCCGACACTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR-3UTR GCA 90 bp | CAGGTCAAAGGGGACGCTTCTGTCCAGTGGCGAGATGGTGGGAGCCTCCCCAGGGAGAGGCGCAGGGTGTaGTCCAAGCCAGGGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: QVKGDASVQWRDGGSLPRERRRV*SKPGWG Trigger: CCCCCACCCTGGCTTGGAGCACACCCTGCGCCTCTC...CCTGGGGAGGCTCCCACCATCTCGCCACTGGACAGAAGCGTCCCCTTTGACCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR-3UTR GCA 90 bp | GAAGTGTCCTCAGGGCGTGAAGAAGGCAGCCAGGTGTGTCTACGTGAAAGGGGGCACAGGTCGCACAGGTaGCTGCCCGCGCGGCGCAGG | + |
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Preference number: 2 (lower is better) Translates to: EVSSGREEGSQVCLRERGHRSHR*LPARRR Trigger: CCTGCGCCGCGCGGGCAGGCACCTGTGCGACCTGTG...CCCCCTTTCACGTAGACACACCTGGCTGCCTTCTTCACGCCCTGAGGACACTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR CAA 90 bp | GGAGCCTCCCCAGGGATGGGGGACGGAGAAGGATGTAGCAGGAGTTaGAGTCCAGGAGGCCACGACGAGAGGCGCAGGGTGTGCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GASPGMGDGEGCSRS*SPGGHDERRRVCSK Trigger: CTTGGAGCACACCCTGCGCCTCTCGTCGTGGCCTCCTGGACTCAAACTCCTGCTACATCCTTCTCCGTCCCCCATCCCTGGGGAGGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGTCCTCAGGGCGTGAAGAAGGCAGCCAGGTGTGTCTACGTGAAAGGGGGGGGGCGCCGCAAAGCTaGGGGCGCTCACAAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: EVSSGREEGSQVCLRERGGAPQS*GRSQVE Trigger: CTCCACTTGTGAGCGCCCCCAGCTTTGCGGCGCCCC...CCCCCTTTCACGTAGACACACCTGGCTGCCTTCTTCACGCCCTGAGGACACTTC 63% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGTGTCCTCAGGGCGTGAAGAAGGCAGCCAGGTGTGTCTACGTGAAAGGGTGTCCAGTGGCGAGATaGTGGGAGCCTCCCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: KKCPQGVKKAARCVYVKGCPVAR*WEPPQG Trigger: TCCCTGGGGAGGCTCCCACCATCTCGCCACTGGACA...CCCTTTCACGTAGACACACCTGGCTGCCTTCTTCACGCCCTGAGGACACTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGTGTCCTCAGGGCGTGAAGAAGGCAGCCAGGTGTGTCTACGTGAAAGGGGACGCTTCTGTCCAGTaGCGAGATGGTGGGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: KKCPQGVKKAARCVYVKGDASVQ*RDGGSL Trigger: GAGGCTCCCACCATCTCGCCACTGGACAGAAGCGTC...CCCTTTCACGTAGACACACCTGGCTGCCTTCTTCACGCCCTGAGGACACTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGTCCTCAGGGCGTGAAGAAGGCAGCCAGGTGTGTCTACGTGAAAGGGGGACTCACCAGGAAACCTaGGGTATGGACTCACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: EVSSGREEGSQVCLRERGTHQET*GMDSLE Trigger: CTCCAGTGAGTCCATACCCCAGGTTTCCTGGTGAGT...CCCCCTTTCACGTAGACACACCTGGCTGCCTTCTTCACGCCCTGAGGACACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGTCCTCAGGGCGTGAAGAAGGCAGCCAGGTGTGTCTACGTGAAAGGGGGACAGGTAAGTGGAGGTaGGGGGCAAACTTGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: EVSSGREEGSQVCLRERGTGKWR*GANLWE Trigger: TTCCCACAAGTTTGCCCCCCACCTCCACTTACCTGT...CCCCCTTTCACGTAGACACACCTGGCTGCCTTCTTCACGCCCTGAGGACACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR CCA 72 bp | TTGGAACTCACCAGGAAACCTGGGGTATGGACTCACTaGAGGCGAGTCAGCTCCGGGGCAAGGGACCCACAG | + |
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Preference number: 3 (lower is better) Translates to: LELTRKPGVWTH*RRVSSGARDPQ Trigger: CTGTGGGTCCCTTGCCCCGGAGCTGACTCGCCTCCAGTGAGTCCATACCCCAGGTTTCCTGGTGAGTTCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR CCA 72 bp | TCCAAAGGCTTGGAACTCACCAGGAAACCTGGGGTATaGACTCACTGGAGGCGAGTCAGCTCCGGGGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: SKGLELTRKPGV*THWRRVSSGAR Trigger: CCTTGCCCCGGAGCTGACTCGCCTCCAGTGAGTCCATACCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR CCA 72 bp | TCTGGCTTCCAAAGGCTTGGAACTCACCAGGAAACCTaGGGTATGGACTCACTGGAGGCGAGTCAGCTCCGG | + |
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Preference number: 3 (lower is better) Translates to: SGFQRLGTHQET*GMDSLEASQLR Trigger: CCGGAGCTGACTCGCCTCCAGTGAGTCCATACCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR GCA 72 bp | AGGCCCACCAACTCCCCTTTCAGTCAGGAGCCCTGGTaGTGCCTGTCTGAAATCTCCAAGAAGTGTCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: RPTNSPFSQEPW*CLSEISKKCPQ Trigger: CTGAGGACACTTCTTGGAGATTTCAGACAGGCAGCACCAGGGCTCCTGACTGAAAGGGGAGTTGGTGGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR CCA 72 bp | ACAGTCGGTGGAGGAGGCGGCTTGGGATCACAGATCTaGCTTCCAAAGGCTTGGAACTCACCAGGAAACCTG | + |
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Preference number: 3 (lower is better) Translates to: TVGGGGGLGSQI*LPKAWNSPGNL Trigger: CAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATCTGTGATCCCAAGCCGCCTCCTCCACCGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR-3UTR CAA 90 bp | GGGATCACAGATCTGGCTTCCAAAGGCTTGGAACTCACCAGGAAACCTGGGGTAGGATGTAGCAGGAGTTaGAGTCCAGGAGGCCACGAC | + |
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Preference number: 3 (lower is better) Translates to: GITDLASKGLELTRKPGVGCSRS*SPGGHD Trigger: GTCGTGGCCTCCTGGACTCAAACTCCTGCTACATCC...TACCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATCTGTGATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR CCA 72 bp | GGCGGCTTGGGATCACAGATCTGGCTTCCAAAGGCTTaGAACTCACCAGGAAACCTGGGGTATGGACTCACT | + |
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Preference number: 3 (lower is better) Translates to: GGLGSQIWLPKA*NSPGNLGYGLT Trigger: AGTGAGTCCATACCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATCTGTGATCCCAAGCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR-3UTR CAA 90 bp | AAGAAGTGTCCTCAGGGCGTGAAGAAGGCAGCCAGGTGTGTCTACGTGAAAGGGCTGGCTTCCAAAGGCTaGGAACTCACCAGGAAACCT | + |
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Preference number: 3 (lower is better) Translates to: KKCPQGVKKAARCVYVKGLASKG*ELTRKP Trigger: AGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAG...CCCTTTCACGTAGACACACCTGGCTGCCTTCTTCACGCCCTGAGGACACTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR CCA 72 bp | GAAAAACATGAGAGAAGGTTGATGAAGTACAGTCGGTaGAGGAGGCGGCTTGGGATCACAGATCTGGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: EKHERRLMKYSR*RRRLGITDLAS Trigger: GGAAGCCAGATCTGTGATCCCAAGCCGCCTCCTCCACCGACTGTACTTCATCAACCTTCTCTCATGTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR TCA 72 bp | TTGTGGGAAAATGAAGGGACGCTAGCAAGTAAGTCATaGACCCAGGAGTCTGACCCAGGAGTGTCGGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: LWENEGTLASKS*TQESDPGVSEK Trigger: TTTTTCCGACACTCCTGGGTCAGACTCCTGGGTTCATGACTTACTTGCTAGCGTCCCTTCATTTTCCCACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR TCA 90 bp | GCGCTCGAGGGCGGCGCCGCAGGTCCGGGGCACAGGTCGCACAGGTGCCTGCCCAGGCCTCCCCAGGGCTaGGCGGGCCGAGAGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ALEGGAAGPGHRSHRCLPRPPQG*AGRERL Trigger: CAGCCGCTCTCGGCCCGCTCAGCCCTGGGGAGGCCT...GGGCAGGCACCTGTGCGACCTGTGCCCCGGACCTGCGGCGCCGCCCTCGAGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR GCA 90 bp | GCGCTCGAGGGCGGCGCCGCAGGTCCGGGGCACAGGTCGCACAGGTGCCTGCCCGCGGATCCATGTCGCTaGGCCCCGCCATCGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: ALEGGAAGPGHRSHRCLPADPCR*APPSAA Trigger: CGCAGCCGATGGCGGGGCGCAGCGACATGGATCCGC...GGGCAGGCACCTGTGCGACCTGTGCCCCGGACCTGCGGCGCCGCCCTCGAGCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | GCGCTCGAGGGCGGCGCCGCAGGTCCGGGGCACAGGTCGCACAGGTGCCTGCCCGGGGCGCCGCAAAGCTaGGGGCGCTCACAAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: ALEGGAAGPGHRSHRCLPGAPQS*GRSQVE Trigger: CTCCACTTGTGAGCGCCCCCAGCTTTGCGGCGCCCC...GGGCAGGCACCTGTGCGACCTGTGCCCCGGACCTGCGGCGCCGCCCTCGAGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR GCA 90 bp | GCGCTCGAGGGCGGCGCCGCAGGTCCGGGGCACAGGTCGCACAGGTGCCTGCCCCAGGAGCCCTGGTGCTaGCTGTCTGAAATCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: ALEGGAAGPGHRSHRCLPQEPWC*LSEISK Trigger: CTTGGAGATTTCAGACAGGCAGCACCAGGGCTCCTG...GGGCAGGCACCTGTGCGACCTGTGCCCCGGACCTGCGGCGCCGCCCTCGAGCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR GCA 90 bp | AAAGGGGACGCTTCTGTCCAGTGGCGAGATGGTGGGAGCCTCCCCAGGGATGGGGGTCGCACAGGTGCCTaGCCGCGCGGCGCAGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KGDASVQWRDGGSLPRDGGRTGA*PRGAGS Trigger: TGAGCCTGCGCCGCGCGGGCAGGCACCTGTGCGACC...CCCATCCCTGGGGAGGCTCCCACCATCTCGCCACTGGACAGAAGCGTCCCCTTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR TCA 90 bp | AAACCTGGGGTATGGACTCACTGGAGGCGAGTCAGCTCCGGGGCAAGGGACCCACCAGGCTGTCGACGCTaGACAGACGCGCGGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: KPGVWTHWRRVSSGARDPPGCRR*TDARAA Trigger: CGCCGCCCGCGCGTCTGTTCAGCGTCGACAGCCTGG...TGGGTCCCTTGCCCCGGAGCTGACTCGCCTCCAGTGAGTCCATACCCCAGGTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | CAGGTCAAAGGGGACGCTTCTGTCCAGTGGCGAGATGGTGGGAGCCTCCCCAGGCAGACAGCGCTGGGGTaGGGGGCGCCGCAAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QVKGDASVQWRDGGSLPRQTALG*GAPQSW Trigger: CCAGCTTTGCGGCGCCCCCCACCCCAGCGCTGTCTG...CCTGGGGAGGCTCCCACCATCTCGCCACTGGACAGAAGCGTCCCCTTTGACCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | ACTGGAGGCGAGTCAGCTCCGGGGCAAGGGACCCACAGACAGCGCTGGGGTGGGGGGGTATGGACTCACTaGAGGCGAGTCAGCTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: TGGESAPGQGTHRQRWGGGVWTH*RRVSSG Trigger: CCCGGAGCTGACTCGCCTCCAGTGAGTCCATACCCC...CCCACCCCAGCGCTGTCTGTGGGTCCCTTGCCCCGGAGCTGACTCGCCTCCAGT 68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | AAACCTGGGGTATGGACTCACTGGAGGCGAGTCAGCTCCGGGGCAAGGGACCCACGACGGCGCGACCGCTaGCAGGGCAGGGAAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: KPGVWTHWRRVSSGARDPRRRDR*QGREAR Trigger: TCTGGCTTCCCTGCCCTGCCAGCGGTCGCGCCGTCG...TGGGTCCCTTGCCCCGGAGCTGACTCGCCTCCAGTGAGTCCATACCCCAGGTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR TCA 90 bp | AGATGGGGCGCTCGAGGGCGGCGCCGCAGGTCCGGGGCACAGGTCGCACAGGTGCTAGCAAGTAAGTCATaGACCCAGGAGTCTGACCCA | + |
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Preference number: 4 (lower is better) Translates to: RWGARGRRRRSGAQVAQVLASKS*TQESDP Trigger: TGGGTCAGACTCCTGGGTTCATGACTTACTTGCTAG...CACCTGTGCGACCTGTGCCCCGGACCTGCGGCGCCGCCCTCGAGCGCCCCATCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| 3UTR CAA 72 bp | CCAGGGATGGGGGACGGAGAAGGATGTAGCAGGAGTTaGAGTCCAGGAGGCCACGACGAGAGGCGCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: PGMGDGEGCSRS*SPGGHDERRRV Trigger: CACCCTGCGCCTCTCGTCGTGGCCTCCTGGACTCAAACTCCTGCTACATCCTTCTCCGTCCCCCATCCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR GCA 90 bp | GAAGGATGTAGCAGGAGTTTGAGTCCAGGAGGCCACGACGAGAGGCGCAGGGTGCCCGCTAGCTCCGGCTaGAGGTTCACCAGGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: EGCSRSLSPGGHDERRRVPASSG*RFTRLS Trigger: CGACAGCCTGGTGAACCTGCAGCCGGAGCTAGCGGG...CACCCTGCGCCTCTCGTCGTGGCCTCCTGGACTCAAACTCCTGCTACATCCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR GCA 90 bp | AAGAAGTGTCCTCAGGGCGTGAAGAAGGCAGCCAGGTGTGTCTACGTGAAAGGGCACAGGTCGCACAGGTaGCTGCCCGCGCGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KKCPQGVKKAARCVYVKGHRSHR*LPARRR Trigger: CCTGCGCCGCGCGGGCAGGCACCTGTGCGACCTGTG...CCCTTTCACGTAGACACACCTGGCTGCCTTCTTCACGCCCTGAGGACACTTCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | AAAGGGGACGCTTCTGTCCAGTGGCGAGATGGTGGGAGCCTCCCCAGGGATGGGGAGCCTCCCCAGGGATaGGGGACGGAGAAGGATGTA | + |
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Preference number: 4 (lower is better) Translates to: KGDASVQWRDGGSLPRDGEPPQG*GTEKDV Trigger: TACATCCTTCTCCGTCCCCCATCCCTGGGGAGGCTC...CCCATCCCTGGGGAGGCTCCCACCATCTCGCCACTGGACAGAAGCGTCCCCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | ACTGGAGGCGAGTCAGCTCCGGGGCAAGGGACCCACAGACAGCGCTGGGGTGGGACAGGTAAGTGGAGGTaGGGGGCAAACTTGTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TGGESAPGQGTHRQRWGGTGKWR*GANLWE Trigger: TTCCCACAAGTTTGCCCCCCACCTCCACTTACCTGT...CCCACCCCAGCGCTGTCTGTGGGTCCCTTGCCCCGGAGCTGACTCGCCTCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | AAACCTGGGGTATGGACTCACTGGAGGCGAGTCAGCTCCGGGGCAAGGGACCCAGACGCTTCTGTCCAGTaGCGAGATGGTGGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KPGVWTHWRRVSSGARDPDASVQ*RDGGSL Trigger: GAGGCTCCCACCATCTCGCCACTGGACAGAAGCGTC...TGGGTCCCTTGCCCCGGAGCTGACTCGCCTCCAGTGAGTCCATACCCCAGGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR TCA 90 bp | GGAGAAGGATGTAGCAGGAGTTTGAGTCCAGGAGGCCACGACGAGAGGCGCAGGGATGTAGCAGGAGTTTaGGTCCAGGAGGCCACGACG | + |
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Preference number: 4 (lower is better) Translates to: GEGCSRSLSPGGHDERRRDVAGV*VQEATT Trigger: CGTCGTGGCCTCCTGGACTCAAACTCCTGCTACATC...CCTGCGCCTCTCGTCGTGGCCTCCTGGACTCAAACTCCTGCTACATCCTTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR GCA 90 bp | CGGCTTGGGATCACAGATCTGGCTTCCAAAGGCTTGGAACTCACCAGGAAACCTGAGAGGCGCAGGGTGTaGTCCAAGCCAGGGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: RLGITDLASKGLELTRKPERRRV*SKPGWG Trigger: CCCCCACCCTGGCTTGGAGCACACCCTGCGCCTCTC...AGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATCTGTGATCCCAAGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | AAACATGAGAGAAGGTTGATGAAGTACAGTCGGTGGAGGAGGCGGCTTGGGATCGACCTGCGAGTAGAGTaGCGGGGAGGCGGCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KHERRLMKYSRWRRRLGIDLRVE*RGGGGS Trigger: GCTGCCGCCGCCTCCCCGCCACTCTACTCGCAGGTC...GATCCCAAGCCGCCTCCTCCACCGACTGTACTTCATCAACCTTCTCTCATGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | CAAAGGGGACGCTTCTGTCCAGTGGCGAGATGGTGGGAGCCTCCCCAGGGATGGGAAGAAATGAGAGGCTaGCAGGTCAAAGGGGACGCT | + |
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Preference number: 4 (lower is better) Translates to: QRGRFCPVARWWEPPQGWEEMRG*QVKGDA Trigger: AGCGTCCCCTTTGACCTGCCAGCCTCTCATTTCTTC...CCATCCCTGGGGAGGCTCCCACCATCTCGCCACTGGACAGAAGCGTCCCCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | CAAAGGGGACGCTTCTGTCCAGTGGCGAGATGGTGGGAGCCTCCCCAGGGATGGACTCACCAGGAAACCTaGGGTATGGACTCACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: QRGRFCPVARWWEPPQGWTHQET*GMDSLE Trigger: CTCCAGTGAGTCCATACCCCAGGTTTCCTGGTGAGT...CCATCCCTGGGGAGGCTCCCACCATCTCGCCACTGGACAGAAGCGTCCCCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | AAAGGGGACGCTTCTGTCCAGTGGCGAGATGGTGGGAGCCTCCCCAGGGATGGGTGGCTTCCAAAGGCTTaGAACTCACCAGGAAACCTG | + |
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Preference number: 4 (lower is better) Translates to: KGDASVQWRDGGSLPRDGWLPKA*NSPGNL Trigger: CAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCA...CCCATCCCTGGGGAGGCTCCCACCATCTCGCCACTGGACAGAAGCGTCCCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR TCA 90 bp | GAAGGATGTAGCAGGAGTTTGAGTCCAGGAGGCCACGACGAGAGGCGCAGGGTGATGAACCCAGGAGTCTaGCCCAGGAGTGTCGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: EGCSRSLSPGGHDERRRVMNPGV*PRSVGK Trigger: TTTTCCGACACTCCTGGGTCAGACTCCTGGGTTCAT...CACCCTGCGCCTCTCGTCGTGGCCTCCTGGACTCAAACTCCTGCTACATCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR TCA 90 bp | GGCGGCTTGGGATCACAGATCTGGCTTCCAAAGGCTTGGAACTCACCAGGAAACAGTGTCCTCAGGGCGTaGAGAAGGCAGCCAGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: GGLGSQIWLPKAWNSPGNSVLRA*RRQPGV Trigger: CACACCTGGCTGCCTTCTTCACGCCCTGAGGACACT...GTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATCTGTGATCCCAAGCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR GCA 90 bp | GGGATCACAGATCTGGCTTCCAAAGGCTTGGAACTCACCAGGAAACCTGGGGTATGGCGGATGCTGTTCTaGCACTTGCGCGGGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: GITDLASKGLELTRKPGVWRMLF*HLRGLS Trigger: CGACAGCCCGCGCAAGTGGCAGAACAGCATCCGCCA...TACCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATCTGTGATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | TTGGGATCACAGATCTGGCTTCCAAAGGCTTGGAACTCACCAGGAAACCTGGGGTGTCCAGTGGCGAGATaGTGGGAGCCTCCCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LGSQIWLPKAWNSPGNLGCPVAR*WEPPQG Trigger: TCCCTGGGGAGGCTCCCACCATCTCGCCACTGGACA...CCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATCTGTGATCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | GGCTTGGAACTCACCAGGAAACCTGGGGTATGGACTCACTGGAGGCGAGTCAGCAGGAAACCTGGGGTATaGACTCACTGGAGGCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: GLELTRKPGVWTHWRRVSRKPGV*THWRRV Trigger: GACTCGCCTCCAGTGAGTCCATACCCCAGGTTTCCT...GCTGACTCGCCTCCAGTGAGTCCATACCCCAGGTTTCCTGGTGAGTTCCAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | GGCTTGGAACTCACCAGGAAACCTGGGGTATGGACTCACTGGAGGCGAGTCAGCATGAAGTACAGTCGGTaGAGGAGGCGGCTTGGGATC | + |
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Preference number: 4 (lower is better) Translates to: GLELTRKPGVWTHWRRVSMKYSR*RRRLGI Trigger: GATCCCAAGCCGCCTCCTCCACCGACTGTACTTCAT...GCTGACTCGCCTCCAGTGAGTCCATACCCCAGGTTTCCTGGTGAGTTCCAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR GCA 90 bp | CAGATCTGGCTTCCAAAGGCTTGGAACTCACCAGGAAACCTGGGGTATGGACTCAGTCAGGAGCCCTGGTaGTGCCTGTCTGAAATCTCC | + |
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Preference number: 4 (lower is better) Translates to: QIWLPKAWNSPGNLGYGLSQEPW*CLSEIS Trigger: GGAGATTTCAGACAGGCAGCACCAGGGCTCCTGACT...GAGTCCATACCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | GGGATCACAGATCTGGCTTCCAAAGGCTTGGAACTCACCAGGAAACCTGGGGTATTCAGTCAGGAGCCCTaGTGCTGCCTGTCTGAAATC | + |
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Preference number: 4 (lower is better) Translates to: GITDLASKGLELTRKPGVFSQEP*CCLSEI Trigger: GATTTCAGACAGGCAGCACCAGGGCTCCTGACTGAA...TACCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATCTGTGATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR TCA 90 bp | AAACATGAGAGAAGGTTGATGAAGTACAGTCGGTGGAGGAGGCGGCTTGGGATCCTGGTGCTGCCTGTCTaGAATCTCCAAGAAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: KHERRLMKYSRWRRRLGILVLPV*NLQEVS Trigger: GGACACTTCTTGGAGATTTCAGACAGGCAGCACCAG...GATCCCAAGCCGCCTCCTCCACCGACTGTACTTCATCAACCTTCTCTCATGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CCA 90 bp | AAACATGAGAGAAGGTTGATGAAGTACAGTCGGTGGAGGAGGCGGCTTGGGATCAAGTTTTCCAGGGGATaGGGCAGACCTAAAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KHERRLMKYSRWRRRLGIKFSRG*GRPKGP Trigger: TGGGCCTTTAGGTCTGCCCCATCCCCTGGAAAACTT...GATCCCAAGCCGCCTCCTCCACCGACTGTACTTCATCAACCTTCTCTCATGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR TCA 90 bp | AAACATGAGAGAAGGTTGATGAAGTACAGTCGGTGGAGGAGGCGGCTTGGGATCAGTGTCGGAAAAACATaGGAGAAGGTTGATGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: KHERRLMKYSRWRRRLGISVGKT*EKVDEV Trigger: TACTTCATCAACCTTCTCTCATGTTTTTCCGACACT...GATCCCAAGCCGCCTCCTCCACCGACTGTACTTCATCAACCTTCTCTCATGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS TCA 90 bp | GCCCCGACGCGAAGCCCGGCTGCCTCAGGTAGGCCTCCCCAGGGCTaGGCGGGCCGAGAGCGGCTGCCGGCCCGGCCAAGGCCAGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: APTRSPAASGRPPQG*AGRERLPARPRPGG Trigger: CCCTCCTGGCCTTGGCCGGGCCGGCAGCCGCTCTCGGCCCGCTCAGCCCTGGGGAGGCCTACCTGAGGCAGCCGGGCTTCGCGTCGGGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS GCA 90 bp | CTGCCTCAGGTAGGCCTCCCCAGGGCTGAGCGGGCCGAGAGCGGCTaGCGGCCCGGCCAAGGCCAGGAGGGGCTCAGCGGGCAGCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LPQVGLPRAERAESG*RPGQGQEGLSGQRA Trigger: GGCCCGCTGCCCGCTGAGCCCCTCCTGGCCTTGGCCGGGCCGGCAGCCGCTCTCGGCCCGCTCAGCCCTGGGGAGGCCTACCTGAGGCAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS GCA 90 bp | GCGCTCGAGGGCGGCGCCGCAGGTCCGGGGCACAGGTCGCACAGGTaGCTGCCCGCGCGGCGCAGGCTCACAGGTAGCGCTCCAGCCCCG | + |
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Preference number: 5 (lower is better) Translates to: ALEGGAAGPGHRSHR*LPARRRLTGSAPAP Trigger: CGGGGCTGGAGCGCTACCTGTGAGCCTGCGCCGCGCGGGCAGGCACCTGTGCGACCTGTGCCCCGGACCTGCGGCGCCGCCCTCGAGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS GCA 90 bp | TCGAGGGCGGCGCCGCAGGTCCGGGGCACAGGTCGCACAGGTGCCTaGCCGCGCGGCGCAGGCTCACAGGTAGCGCTCCAGCCCCGACGC | + |
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Preference number: 5 (lower is better) Translates to: SRAAPQVRGTGRTGA*PRGAGSQVALQPRR Trigger: GCGTCGGGGCTGGAGCGCTACCTGTGAGCCTGCGCCGCGCGGGCAGGCACCTGTGCGACCTGTGCCCCGGACCTGCGGCGCCGCCCTCGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS TCA 90 bp | CCAGCCCCGCTAGCTCCGGCTGCAGGTTCACCAGGCTGTCGACGCTaGACAGACGCGCGGGCGGCGAGGGGCCCGGTCCGGCAGAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: PAPLAPAAGSPGCRR*TDARAARGPVRQKA Trigger: CGCCTTCTGCCGGACCGGGCCCCTCGCCGCCCGCGCGTCTGTTCAGCGTCGACAGCCTGGTGAACCTGCAGCCGGAGCTAGCGGGGCTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CAA 90 bp | GAAGGATGTAGCAGGAGTTTGAGTCCAGGAGGCCACGACGAGAGGCGCAGGGTGGGATGTAGCAGGAGTTaGAGTCCAGGAGGCCACGAC | + |
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Preference number: 5 (lower is better) Translates to: EGCSRSLSPGGHDERRRVGCSRS*SPGGHD Trigger: GTCGTGGCCTCCTGGACTCAAACTCCTGCTACATCC...CACCCTGCGCCTCTCGTCGTGGCCTCCTGGACTCAAACTCCTGCTACATCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CAA 90 bp | GAAGTGTCCTCAGGGCGTGAAGAAGGCAGCCAGGTGTGTCTACGTGAAAGGGGGCTGGCTTCCAAAGGCTaGGAACTCACCAGGAAACCT | + |
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Preference number: 5 (lower is better) Translates to: EVSSGREEGSQVCLRERGLASKG*ELTRKP Trigger: AGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAG...CCCCCTTTCACGTAGACACACCTGGCTGCCTTCTTCACGCCCTGAGGACACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CAA 90 bp | TTGGGATCACAGATCTGGCTTCCAAAGGCTTGGAACTCACCAGGAAACCTGGGGGGTGGAGGAGGCGGCTaGGGATCACAGATCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LGSQIWLPKAWNSPGNLGGGGGG*GSQIWL Trigger: AAGCCAGATCTGTGATCCCAAGCCGCCTCCTCCACC...CCCCAGGTTTCCTGGTGAGTTCCAAGCCTTTGGAAGCCAGATCTGTGATCCCAA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS-3UTR CAA 90 bp | CAGGTCAAAGGGGACGCTTCTGTCCAGTGGCGAGATGGTGGGAGCCTCCCCAGGAAACATGAGAGAAGGTaGATGAAGTACAGTCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: QVKGDASVQWRDGGSLPRKHERR*MKYSRW Trigger: CCACCGACTGTACTTCATCAACCTTCTCTCATGTTT...CCTGGGGAGGCTCCCACCATCTCGCCACTGGACAGAAGCGTCCCCTTTGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS GCA 72 bp | GTAGGCCTCCCCAGGGCTGAGCGGGCCGAGAGCGGCTaGCGGCCCGGCCAAGGCCAGGAGGGGCTCAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: VGLPRAERAESG*RPGQGQEGLSG Trigger: CCCGCTGAGCCCCTCCTGGCCTTGGCCGGGCCGGCAGCCGCTCTCGGCCCGCTCAGCCCTGGGGAGGCCTAC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS TCA 72 bp | CGAAGCCCGGCTGCCTCAGGTAGGCCTCCCCAGGGCTaGGCGGGCCGAGAGCGGCTGCCGGCCCGGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: RSPAASGRPPQG*AGRERLPARPR Trigger: CCTTGGCCGGGCCGGCAGCCGCTCTCGGCCCGCTCAGCCCTGGGGAGGCCTACCTGAGGCAGCCGGGCTTCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS GCA 72 bp | GGCGGCGCCGCAGGTCCGGGGCACAGGTCGCACAGGTaGCTGCCCGCGCGGCGCAGGCTCACAGGTAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: GGAAGPGHRSHR*LPARRRLTGSA Trigger: AGCGCTACCTGTGAGCCTGCGCCGCGCGGGCAGGCACCTGTGCGACCTGTGCCCCGGACCTGCGGCGCCGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS GCA 72 bp | GGAAGCCAGAGAACGCGGCGGGCGGATCCATGTCGCTaGGCCCCGCCATCGGCTGCGGCAGCCCCTGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: GSQRTRRADPCR*APPSAAAAPAR Trigger: GCGGGCAGGGGCTGCCGCAGCCGATGGCGGGGCGCAGCGACATGGATCCGCCCGCCGCGTTCTCTGGCTTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS GCA 72 bp | GCGCCGCAGGTCCGGGGCACAGGTCGCACAGGTGCCTaGCCGCGCGGCGCAGGCTCACAGGTAGCGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: APQVRGTGRTGA*PRGAGSQVALQ Trigger: CTGGAGCGCTACCTGTGAGCCTGCGCCGCGCGGGCAGGCACCTGTGCGACCTGTGCCCCGGACCTGCGGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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| CDS TCA 72 bp | CTAGCTCCGGCTGCAGGTTCACCAGGCTGTCGACGCTaGACAGACGCGCGGGCGGCGAGGGGCCCGGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: LAPAAGSPGCRR*TDARAARGPVR Trigger: CCGGACCGGGCCCCTCGCCGCCCGCGCGTCTGTTCAGCGTCGACAGCCTGGTGAACCTGCAGCCGGAGCTAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335071.4 |
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