Pregenerated sensors for FOXB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000171956Ensembl transcript IDs: ENST00000396057.6, ENST00000560857.1
Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGTCTCCTaGGTCCAAAACAAAGTTCTCTTGGGGCAAGGCGGGTTGGCCGAA | + |
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Preference number: 1 (lower is better) Translates to: SHAPLGPSASLCLVS*VQNKVLLGQGGLAE Trigger: TTCGGCCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CCA 90 bp | AGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTaGTCTCCTGGGTCCAAAACAAAGTTCTCTTGGGGCAAGGCGGGT | + |
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Preference number: 1 (lower is better) Translates to: RTTPTRLSAHLQVCV*SPGSKTKFSWGKAG Trigger: ACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR GCA 90 bp | TTGATGTGGGGGCGAGGACAACTCCCACGCGCCTCTCGGCCCATCTaGAAGTTTGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LMWGRGQLPRASRPI*KFVFGLLGPKQSSL Trigger: AAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTCGCCCCCACATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR GCA 90 bp | TACACAGTGTATAATCATTCCTATTCACAAGTATTTACATCTCTTTaGAGCCCTTTAGCTTCTTGGAAAAGTTCTGGTAGCAAACAGAAA | + |
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Preference number: 1 (lower is better) Translates to: YTVYNHSYSQVFTSL*SPLASWKSSGSKQK Trigger: TTTCTGTTTGCTACCAGAACTTTTCCAAGAAGCTAAAGGGCTGCAAAGAGATGTAAATACTTGTGAATAGGAATGATTATACACTGTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCCGCCGATCTGGGCGGAGGGAAGACGCGCTTTTCTCGGCGAAGAGGGGGATGGTTCGGCTCAGGTaGCCCCGGCCTTCCTTGATG | + |
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Preference number: 2 (lower is better) Translates to: GLRRSGRREDALFSAKRGMVRLR*PRPSLM Trigger: CATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCAT...CCCCCTCTTCGCCGAGAAAAGCGCGTCTTCCCTCCGCCCAGATCGGCGGAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR TCA 90 bp | TGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTCCCACGCGCCTCTCGGCGGGTTGGCCGAAGGTaGAATGAACAAGTTAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: WPRPSLMWGRGQLPRASRRVGRR*NEQVRV Trigger: CACCCTAACTTGTTCATTTCACCTTCGGCCAACCCG...CCGAGAGGCGCGTGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR GCA 90 bp | TCTCCGCAGAAGCCTAGGAGGCAGGGCCGCAACCCCGGGAAGCTGTGGTCGGCCGCCTCTCGGCCCATCTaGAAGTTTGTGTTTGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SPQKPRRQGRNPGKLWSAASRPI*KFVFGL Trigger: GAGACCAAACACAAACTTGCAGATGGGCCGAGAGGC...GGCCGACCACAGCTTCCCGGGGTTGCGGCCCTGCCTCCTAGGCTTCTGCGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CCA 90 bp | GGGGCGAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGGGAAGGCGAGTGAGGTaGTGGGGAGGAGAACGAGAG | + |
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Preference number: 2 (lower is better) Translates to: GARTTPTRLSAHLQVCVWGRRVR*WGGERE Trigger: CTCTCGTTCTCCTCCCCACCACCTCACTCGCCTTCC...CCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACATCCCTTCCTCCCCTGCGCTGTTaGAGCCCTCGCGGGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LVANRKTCPWESYPVTSLPPLRC*SPRGEG Trigger: CCCCTCCCCGCGAGGGCTGCAACAGCGCAGGGGAGG...AAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CCA 90 bp | GATGGTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTAAAACAAAGTTCTCTTaGGGCAAGGCGGGTTGGCCG | + |
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Preference number: 2 (lower is better) Translates to: DGSAQVAPAFLDVGARTTKTKFS*GKAGWP Trigger: CGGCCAACCCGCCTTGCCCCAAGAGAACTTTGTTTT...AGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTCAGCTTGGCAGCCTCTTTCCTAACTCCCAGCGCCTGGAGCCTCTGGAAATGAACAAGTTAGGGTaGCGGTCCCAGGTGGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LSQLGSLFPNSQRLEPLEMNKLG*RSQVGA Trigger: GGCCCCCACCTGGGACCGCCACCCTAACTTGTTCAT...TTCCAGAGGCTCCAGGCGCTGGGAGTTAGGAAAGAGGCTGCCAAGCTGAGAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CCA 90 bp | CTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACATCCCTTGCCTCAGGGAGGGGATaGTTCGGCTCAGGTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: LVANRKTCPWESYPVTSLASGRG*FGSGGP Trigger: GGGGCCACCTGAGCCGAACCATCCCCTCCCTGAGGC...AAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTCTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACACCAGCCCCTGCCGGATaGGCGGAGGCGAGTGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: KVLVANRKTCPWESYPVTPAPAG*AEASGV Trigger: TACCCCACTCGCCTCCGCCCATCCGGCAGGGGCTGG...TGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAGAACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR GCA 90 bp | GAGCTATCCGGTGACATCCCTTCATGTTACCAGTCAGCTTATCTAAGTTCTTCCGATCCGGCCCTCCCCTaGGCTGTTGCAGCCCTCGCG | + |
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Preference number: 2 (lower is better) Translates to: ELSGDIPSCYQSAYLSSSDPALP*AVAALA Trigger: CGCGAGGGCTGCAACAGCGCAGGGGAGGGCCGGATC...GGAAGAACTTAGATAAGCTGACTGGTAACATGAAGGGATGTCACCGGATAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGCGCAGAGTTCGGGGCTCCGCCGATCTGGGCGGAGGGAAGACGCGCTTTTCTTGTGTTTGGTCTCCTaGGTCCAAAACAAAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: TAQSSGLRRSGRREDALFLCLVS*VQNKVL Trigger: GAGAACTTTGTTTTGGACCCAGGAGACCAAACACAA...GAAAAGCGCGTCTTCCCTCCGCCCAGATCGGCGGAGCCCCGAACTCTGCGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CCA 90 bp | CTTTTTGCTGCAGATTTCCAAGACGTAAAGAGATCCGGCCCTCCCCTGCGCTGTCGGCCTTCCTTGATGTaGGGGCGAGGACAACTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LFAADFQDVKRSGPPLRCRPSLM*GRGQLP Trigger: TGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCG...ACAGCGCAGGGGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CAA 90 bp | TTGGTCTCCTGGGTCCAAAACAAAGTTCTCTTGGGGCAAGGCGGGTaGGCCGAAGGTGAAATGAACAAGTTAGGGTGGCGGTCCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LVSWVQNKVLLGQGG*AEGEMNKLGWRSQV Trigger: CACCTGGGACCGCCACCCTAACTTGTTCATTTCACCTTCGGCCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR TCA 90 bp | GAGCTATCCGGTGACATCCCTTCATGTTACCAGTCAGCTTATCTAAGTTCTTCCGGCCCCGGCCTTCCTTaGTGTGGGGGCGAGGACAAC | + |
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Preference number: 2 (lower is better) Translates to: ELSGDIPSCYQSAYLSSSGPGLP*CGGEDN Trigger: GTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCC...GGAAGAACTTAGATAAGCTGACTGGTAACATGAAGGGATGTCACCGGATAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CAA 90 bp | TTTAGTTTTGTTTTGCTGTGTGAGGACGAGCGTCGCTTTCTCAGCTaGGCAGCCTCTTTCCTAACTCCCAGCGCCTGGAGCCTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: FSFVLLCEDERRFLS*AASFLTPSAWSLWK Trigger: CTTCCAGAGGCTCCAGGCGCTGGGAGTTAGGAAAGAGGCTGCCAAGCTGAGAAAGCGACGCTCGTCCTCACACAGCAAAACAAAACTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CAA 90 bp | TCTGCAAGTTTGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTCTaGGGGCAAGGCGGGTTGGCCGAAGGTGAAATGAACAAGTTAGGG | + |
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Preference number: 2 (lower is better) Translates to: SASLCLVSWVQNKVL*GQGGLAEGEMNKLG Trigger: CCCTAACTTGTTCATTTCACCTTCGGCCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACAAACTTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CCA 90 bp | GTAAACATTCACATTACAACAGGTACTTATAATGTGGGCTTTGCCCGTTCGTCCATGGGCGGAGGCGAGTaGGGTAGGAAGATTAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: VNIHITTGTYNVGFARSSMGGGE*GRKISG Trigger: GCCACTAATCTTCCTACCCCACTCGCCTCCGCCCAT...GGACGAACGGGCAAAGCCCACATTATAAGTACCTGTTGTAATGTGAATGTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CAA 90 bp | AGCCCTTTAGCTTCTTGGAAAAGTTCTGGTAGCAAACAGAAAGACTaGTCCGTGGGAGAGCTATCCGGTGACATCCCTTCATGTTACCAG | + |
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Preference number: 2 (lower is better) Translates to: SPLASWKSSGSKQKD*SVGELSGDIPSCYQ Trigger: CTGGTAACATGAAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAGAACTTTTCCAAGAAGCTAAAGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CAA 90 bp | TACTGGGCGCTTTGTAAACAATACAAGGTTACTTTTAGTTTTGTTTaGCTGTGTGAGGACGAGCGTCGCTTTCTCAGCTTGGCAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: YWALCKQYKVTFSFV*LCEDERRFLSLAAS Trigger: AGAGGCTGCCAAGCTGAGAAAGCGACGCTCGTCCTCACACAGCAAAACAAAACTAAAAGTAACCTTGTATTGTTTACAAAGCGCCCAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR TCA 90 bp | GTAAACATTCACATTACAACAGGTACTTATAATGTGGGCTTTGCCCGTTCGTCCTTTTGTTTTGCTGTGTaGGGACGAGCGTCGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: VNIHITTGTYNVGFARSSFCFAV*GRASLS Trigger: AGAAAGCGACGCTCGTCCTCACACAGCAAAACAAAA...GGACGAACGGGCAAAGCCCACATTATAAGTACCTGTTGTAATGTGAATGTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CAA 90 bp | TCTCCGCAGAAGCCTAGGAGGCAGGGCCGCAACCCCGGGAAGCTGTGGTCGGCCCCCTCCCCTGCGCTGTaGCAGCCCTCGCGGGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: SPQKPRRQGRNPGKLWSAPSPAL*QPSRGG Trigger: CCCTCCCCGCGAGGGCTGCAACAGCGCAGGGGAGGG...GGCCGACCACAGCTTCCCGGGGTTGCGGCCCTGCCTCCTAGGCTTCTGCGGAGA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CCA 72 bp | ATGGTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTaGGGGCGAGGACAACTCCCACGCGCCTCTCGGCCC | + |
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Preference number: 3 (lower is better) Translates to: MVRLRWPRPSLM*GRGQLPRASRP Trigger: GGGCCGAGAGGCGCGTGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CCA 72 bp | GGCGGGTTGGCCGAAGGTGAAATGAACAAGTTAGGGTaGCGGTCCCAGGTGGGGGCCGGCAGGACTGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: GGLAEGEMNKLG*RSQVGAGRTGS Trigger: GCTCCCAGTCCTGCCGGCCCCCACCTGGGACCGCCACCCTAACTTGTTCATTTCACCTTCGGCCAACCCGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CAA 90 bp | TCTCCGCAGAAGCCTAGGAGGCAGGGCCGCAACCCCGGGAAGCTGTGGTCGGCCTTGGGGCAAGGCGGGTaGGCCGAAGGTGAAATGAAC | + |
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Preference number: 3 (lower is better) Translates to: SPQKPRRQGRNPGKLWSALGQGG*AEGEMN Trigger: GTTCATTTCACCTTCGGCCAACCCGCCTTGCCCCAA...GGCCGACCACAGCTTCCCGGGGTTGCGGCCCTGCCTCCTAGGCTTCTGCGGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CCA 72 bp | GGTCGGCCCAGCCCCTGCCGGATGGGCGGAGGCGAGTaGGGTAGGAAGATTAGTGGCTCCTTTTTGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: GRPSPCRMGGGE*GRKISGSFLLQ Trigger: CTGCAGCAAAAAGGAGCCACTAATCTTCCTACCCCACTCGCCTCCGCCCATCCGGCAGGGGCTGGGCCGACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR TCA 72 bp | CAAAGTTCTCTTGGGGCAAGGCGGGTTGGCCGAAGGTaGAATGAACAAGTTAGGGTGGCGGTCCCAGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: QSSLGARRVGRR*NEQVRVAVPGG Trigger: CCCACCTGGGACCGCCACCCTAACTTGTTCATTTCACCTTCGGCCAACCCGCCTTGCCCCAAGAGAACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR GCA 72 bp | GGGCGAGGACAACTCCCACGCGCCTCTCGGCCCATCTaGAAGTTTGTGTTTGGTCTCCTGGGTCCAAAACAA | + |
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Preference number: 3 (lower is better) Translates to: GRGQLPRASRPI*KFVFGLLGPKQ Trigger: TTGTTTTGGACCCAGGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTCGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CCA 72 bp | CCTCTCGGCCCATCTGCAAGTTTGTGTTTGGTCTCCTaGGTCCAAAACAAAGTTCTCTTGGGGCAAGGCGGG | + |
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Preference number: 3 (lower is better) Translates to: PLGPSASLCLVS*VQNKVLLGQGG Trigger: CCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACAAACTTGCAGATGGGCCGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CAA 90 bp | CTTTCTCAGCTTGGCAGCCTCTTTCCTAACTCCCAGCGCCTGGAGCCTCTGGAAGCAGTTTCTCTAGTCTaGAAACTGCGCAGAGTTCGG | + |
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Preference number: 3 (lower is better) Translates to: LSQLGSLFPNSQRLEPLEAVSLV*KLRRVR Trigger: CCGAACTCTGCGCAGTTTCAAGACTAGAGAAACTGC...TTCCAGAGGCTCCAGGCGCTGGGAGTTAGGAAAGAGGCTGCCAAGCTGAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR GCA 72 bp | GCGAGTGGGGTAGGAAGATTAGTGGCTCCTTTTTGCTaGAGATTTCCAAGACGTAAAGAGATCCGGCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: ASGVGRLVAPFC*RFPRRKEIRPS Trigger: GGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAGGAGCCACTAATCTTCCTACCCCACTCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR GCA 72 bp | GAGGCGAGTGGGGTAGGAAGATTAGTGGCTCCTTTTTaGTGCAGATTTCCAAGACGTAAAGAGATCCGGCCC | + |
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Preference number: 3 (lower is better) Translates to: EASGVGRLVAPF*CRFPRRKEIRP Trigger: GGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAGGAGCCACTAATCTTCCTACCCCACTCGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGTTCTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACAGGCCCATCTGCAAGTTaGTGTTTGGTCTCCTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: KVLVANRKTCPWESYPVTGPSAS*CLVSWV Trigger: GACCCAGGAGACCAAACACAAACTTGCAGATGGGCC...TGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAGAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CCA 72 bp | GGAAAAGTTCTGGTAGCAAACAGAAAGACTTGTCCGTaGGAGAGCTATCCGGTGACATCCCTTCATGTTACC | + |
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Preference number: 3 (lower is better) Translates to: GKVLVANRKTCP*ESYPVTSLHVT Trigger: GGTAACATGAAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAGAACTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR TCA 72 bp | CAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTaGCATCCCTTCATGTTACCAGTCAGCTTATCTAAG | + |
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Preference number: 3 (lower is better) Translates to: QTERLVRGRAIR*HPFMLPVSLSK Trigger: CTTAGATAAGCTGACTGGTAACATGAAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR TCA 90 bp | TCTCCGCAGAAGCCTAGGAGGCAGGGCCGCAACCCCGGGAAGCTGTGGTCGGCCAGGCCGCCAGCGCGCTaGGCCGCAGCTTGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SPQKPRRQGRNPGKLWSARPPAR*AAAWPA Trigger: AGCAGGCCAAGCTGCGGCTCAGCGCGCTGGCGGCCT...GGCCGACCACAGCTTCCCGGGGTTGCGGCCCTGCCTCCTAGGCTTCTGCGGAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR GCA 90 bp | TCTCCGCAGAAGCCTAGGAGGCAGGGCCGCAACCCCGGGAAGCTGTGGTCGGCCCCGGGAGGACGCCGCTaGGCGCCGCTTCTCTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SPQKPRRQGRNPGKLWSAPGGRR*APLLSR Trigger: CCGAGAGAGAAGCGGCGCGCAGCGGCGTCCTCCCGG...GGCCGACCACAGCTTCCCGGGGTTGCGGCCCTGCCTCCTAGGCTTCTGCGGAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | TCTCCGCAGAAGCCTAGGAGGCAGGGCCGCAACCCCGGGAAGCTGTGGTCGGCCGGCGGCGGGCATCTGTaGCAGGTGCGTGCCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SPQKPRRQGRNPGKLWSAGGGHL*QVRARG Trigger: GCCTCGGGCACGCACCTGCCACAGATGCCCGCCGCC...GGCCGACCACAGCTTCCCGGGGTTGCGGCCCTGCCTCCTAGGCTTCTGCGGAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR GCA 90 bp | CTCAGGGAGGGGATGGTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCCGCGTCGGCTGGCTTaGTGGGCGCCAGGTGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: LREGMVRLRWPRPSLMWGPRRLA*WAPGGR Trigger: CCGACCACCTGGCGCCCAGCAAGCCAGCCGACGCGG...CCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCATCCCCTCCCTGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR GCA 90 bp | TCTCCGCAGAAGCCTAGGAGGCAGGGCCGCAACCCCGGGAAGCTGTGGTCGGCCGCAGCGGGCACCGGCTaGATGGCGGAGAAGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SPQKPRRQGRNPGKLWSAAAGTG*MAEKAS Trigger: GCTGGCCTTCTCCGCCATGCAGCCGGTGCCCGCTGC...GGCCGACCACAGCTTCCCGGGGTTGCGGCCCTGCCTCCTAGGCTTCTGCGGAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR GCA 90 bp | CTCAGGGAGGGGATGGTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCCTCCCCTGCGCTGTTaGAGCCCTCGCGGGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LREGMVRLRWPRPSLMWGPPLRC*SPRGEG Trigger: CCCCTCCCCGCGAGGGCTGCAACAGCGCAGGGGAGG...CCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCATCCCCTCCCTGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | GGGCTCCGCCGATCTGGGCGGAGGGAAGACGCGCTTTTCTCGGCGAAGAGGGGGATGGCGGGCAGCGTTTaGCCCGCCGCGTGGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: GLRRSGRREDALFSAKRGMAGSV*PAAWHS Trigger: GCTGTGCCACGCGGCGGGCCAAACGCTGCCCGCCAT...CCCCCTCTTCGCCGAGAAAAGCGCGTCTTCCCTCCGCCCAGATCGGCGGAGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | TCTCCGCAGAAGCCTAGGAGGCAGGGCCGCAACCCCGGGAAGCTGTGGTCGGCCCCAGCCCCTGCCGGATaGGCGGAGGCGAGTGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SPQKPRRQGRNPGKLWSAPAPAG*AEASGV Trigger: TACCCCACTCGCCTCCGCCCATCCGGCAGGGGCTGG...GGCCGACCACAGCTTCCCGGGGTTGCGGCCCTGCCTCCTAGGCTTCTGCGGAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR GCA 90 bp | TGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTCCCACGCGCCTCTCGGGGTCGCTGTACGTGTTaGGGCCGGGCCGAGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: WPRPSLMWGRGQLPRASRGRCTC*GRAEAS Trigger: AGATGCCTCGGCCCGGCCGCAACACGTACAGCGACC...CCGAGAGGCGCGTGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR GCA 90 bp | TGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTCCCACGCGCCTCTCGGGCTCCTGCGGGTCAGTaGACCGCCACCGAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WPRPSLMWGRGQLPRASRAPAGQ*TATECK Trigger: CTTGCACTCGGTGGCGGTGCACTGACCCGCAGGAGC...CCGAGAGGCGCGTGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCGCCGATCTGGGCGGAGGGAAGACGCGCTTTTCTCGGCGAAGAGGGGGTCCCGGCGCGGATGGTaGCAGCGACGTGTTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRRSGRREDALFSAKRGSRRGW*QRRVRA Trigger: AGCCCTAACACGTCGCTGCCACCATCCGCGCCGGGA...CCCCCTCTTCGCCGAGAAAAGCGCGTCTTCCCTCCGCCCAGATCGGCGGAGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGAGGGGATGGTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGTCGGCTGGCTTGCTaGGCGCCAGGTGGTCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LREGMVRLRWPRPSLMWGRRLAC*APGGRT Trigger: AGTCCGACCACCTGGCGCCCAGCAAGCCAGCCGACG...CCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCATCCCCTCCCTGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR TCA 90 bp | GATGGTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTTCGGCGAAGAGGGGGTaGCAGGGTTTCCCCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DGSAQVAPAFLDVGARTTSAKRG*QGFPRR Trigger: CCGGCGGGGGAAACCCTGTCACCCCCTCTTCGCCGA...AGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCATC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | GGGGCGAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGCGGGCACCGGCTGCATaGCGGAGAAGGCCAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GARTTPTRLSAHLQVCVWRAPAA*RRRPAP Trigger: GGGGGCTGGCCTTCTCCGCCATGCAGCCGGTGCCCG...CCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTCGCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | TCTCCGCAGAAGCCTAGGAGGCAGGGCCGCAACCCCGGGAAGCTGTGGTCGGCCCGGGGCTGCTTTGGCTaGTGGCTGTTTGCGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SPQKPRRQGRNPGKLWSARGCFG*WLFART Trigger: CGTCCTCGCAAACAGCCACCAGCCAAAGCAGCCCCG...GGCCGACCACAGCTTCCCGGGGTTGCGGCCCTGCCTCCTAGGCTTCTGCGGAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | GATGGTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTTCCTCGCCCTCTTCTTaGTCTGGGTCCGCGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DGSAQVAPAFLDVGARTTSSPSS*SGSARA Trigger: GGCCCGCGCGGACCCAGAGCAAGAAGAGGGCGAGGA...AGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCATC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | ACTGCGCAGAGTTCGGGGCTCCGCCGATCTGGGCGGAGGGAAGACGCGCTTTTCTGCTGCTGCAGGTACTaGGCCGCGTCGGCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TAQSSGLRRSGRREDALFCCCRY*AASAGL Trigger: CAAGCCAGCCGACGCGGCGCAGTACCTGCAGCAGCA...GAAAAGCGCGTCTTCCCTCCGCCCAGATCGGCGGAGCCCCGAACTCTGCGCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | GCCCCTGCCGGATGGGCGGAGGCGAGTGGGGTAGGAAGATTAGTGGCTCCTTTTGATCCGGCCCTCCCCTaGGCTGTTGCAGCCCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: APAGWAEASGVGRLVAPFDPALP*AVAALA Trigger: CGCGAGGGCTGCAACAGCGCAGGGGAGGGCCGGATC...AAAAGGAGCCACTAATCTTCCTACCCCACTCGCCTCCGCCCATCCGGCAGGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCGCCGATCTGGGCGGAGGGAAGACGCGCTTTTCTCGGCGAAGAGGGGGGGAAGGCGAGTGAGGTaGTGGGGAGGAGAACGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLRRSGRREDALFSAKRGGRRVR*WGGERE Trigger: CTCTCGTTCTCCTCCCCACCACCTCACTCGCCTTCC...CCCCCTCTTCGCCGAGAAAAGCGCGTCTTCCCTCCGCCCAGATCGGCGGAGCCC 67% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR TCA 90 bp | GCCCCTGCCGGATGGGCGGAGGCGAGTGGGGTAGGAAGATTAGTGGCTCCTTTTGGCCCCGGCCTTCCTTaGTGTGGGGGCGAGGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: APAGWAEASGVGRLVAPFGPGLP*CGGEDN Trigger: GTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCC...AAAAGGAGCCACTAATCTTCCTACCCCACTCGCCTCCGCCCATCCGGCAGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | GGGGCGAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGCGCAGCTTGGCCTGCTaGTGCAGGTACTGCGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: GARTTPTRLSAHLQVCVWRSLAC*CRYCAA Trigger: CGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCG...CCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTCGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | ACTGCGCAGAGTTCGGGGCTCCGCCGATCTGGGCGGAGGGAAGACGCGCTTTTCTGGCTGGTGGCTGTTTaGGAGGACGTGGGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAQSSGLRRSGRREDALFWLVAV*EDVGLS Trigger: GCTCAGCCCCACGTCCTCGCAAACAGCCACCAGCCA...GAAAAGCGCGTCTTCCCTCCGCCCAGATCGGCGGAGCCCCGAACTCTGCGCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCAGCTTGGCAGCCTCTTTCCTAACTCCCAGCGCCTGGAGCCTCTGGAACGGAGGCCGGGCTGGTaGGCGTTTCGCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQLGSLFPNSQRLEPLERRPGW*AFRWGW Trigger: CCACCCCCAGCGAAACGCTCACCAGCCCGGCCTCCG...TTCCAGAGGCTCCAGGCGCTGGGAGTTAGGAAAGAGGCTGCCAAGCTGAGAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | GCCCCTGCCGGATGGGCGGAGGCGAGTGGGGTAGGAAGATTAGTGGCTCCTTTTAGCCGCAGCTTGGCCTaGTGCTGCAGGTACTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: APAGWAEASGVGRLVAPFSRSLA*CCRYCA Trigger: GGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCGGCT...AAAAGGAGCCACTAATCTTCCTACCCCACTCGCCTCCGCCCATCCGGCAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | GTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTCCCATGGCCGAGTCGATCATaGCGGCGGAGCCATACACGT | + |
|
Preference number: 4 (lower is better) Translates to: VRLRWPRPSLMWGRGQLPWPSRS*RRSHTR Trigger: ACGTGTATGGCTCCGCCGGCATGATCGACTCGGCCA...TGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | GGGGCGAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGGACTCGGCGCGAACCTaGGCTCTTGAGCTCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GARTTPTRLSAHLQVCVWDSART*ALELSP Trigger: GGGGCTGAGCTCAAGAGCCCAGGTTCGCGCCGAGTC...CCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCAGCTTGGCAGCCTCTTTCCTAACTCCCAGCGCCTGGAGCCTCTGGAAGCCCTCTTCTTGCTCTaGGTCCGCGCGGGCCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQLGSLFPNSQRLEPLEALFLL*VRAGRR Trigger: CCGCCGGCCCGCGCGGACCCAGAGCAAGAAGAGGGC...TTCCAGAGGCTCCAGGCGCTGGGAGTTAGGAAAGAGGCTGCCAAGCTGAGAAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGAGGGGATGGTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGATGGGCGGAGGCGAGTaGGGTAGGAAGATTAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LREGMVRLRWPRPSLMWGMGGGE*GRKISG Trigger: GCCACTAATCTTCCTACCCCACTCGCCTCCGCCCAT...CCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCATCCCCTCCCTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCGCCGATCTGGGCGGAGGGAAGACGCGCTTTTCTCGGCGAAGAGGGGGGCCTCTCGGCCCATCTaGAAGTTTGTGTTTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLRRSGRREDALFSAKRGASRPI*KFVFGL Trigger: GAGACCAAACACAAACTTGCAGATGGGCCGAGAGGC...CCCCCTCTTCGCCGAGAAAAGCGCGTCTTCCCTCCGCCCAGATCGGCGGAGCCC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | GATGGTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTATGGTTCGGCTCAGGTaGCCCCGGCCTTCCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: DGSAQVAPAFLDVGARTTMVRLR*PRPSLM Trigger: CATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCAT...AGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | GAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGTCTCCGCCTCAGGGAGGGGATaGTTCGGCTCAGGTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EDNSHAPLGPSASLCLVSASGRG*FGSGGP Trigger: GGGGCCACCTGAGCCGAACCATCCCCTCCCTGAGGC...GGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | TGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTCTTGGGGCAAGGCGGGTTGGGCTCCTGGAGCGTCCTaGGGGCGGCCGAGCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CVWSPGSKTKFSWGKAGWAPGAS*GRPSSA Trigger: AGCCGAGCTCGGCCGCCCGCAGGACGCTCCAGGAGC...CCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | GTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTCCCAAAAGTTGCTTCAAGTTaGGCGTCCGCATCCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRLRWPRPSLMWGRGQLPKVASS*ASASGR Trigger: CCTCCCGGATGCGGACGCGCAACTTGAAGCAACTTT...TGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | GAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGTCTCCTTGAAGCCCGAGGGCTaGGCCACGCCGCCCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EDNSHAPLGPSASLCLVSLKPEG*ATPPKL Trigger: CAACTTGGGCGGCGTGGCGCAGCCCTCGGGCTTCAA...GGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | GAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGTCTCCGAGTCCCGGCGCGGATaGTGGCAGCGACGTGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDNSHAPLGPSASLCLVSESRRG*WQRRVR Trigger: CCTAACACGTCGCTGCCACCATCCGCGCCGGGACTC...GGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | TGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTCCCACGCGCCTCTCGGCAGGTACTTATAATGTaGGCTTTGCCCGTTCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WPRPSLMWGRGQLPRASRQVLIM*ALPVRP Trigger: CGGACGAACGGGCAAAGCCCACATTATAAGTACCTG...CCGAGAGGCGCGTGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | TGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTCTTGGGGCAAGGCGGGTTGGCGTGTGGCCAGCCGGTaGCCAGCGAGCTGCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: CVWSPGSKTKFSWGKAGWRVASR*PASCPW Trigger: CCATGGGCAGCTCGCTGGGCACCGGCTGGCCACACG...CCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | GTGGCTCCTTTTTGCTGCAGATTTCCAAGACGTAAAGAGATCCGGCCCTCCCCTGCGTCCGGGTCCGGTTaGACTCGGCGCGAACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VAPFCCRFPRRKEIRPSPASGSG*TRREPG Trigger: CCCAGGTTCGCGCCGAGTCCAACCGGACCCGGACGC...AGGGGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAGGAGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | GCCCCTGCCGGATGGGCGGAGGCGAGTGGGGTAGGAAGATTAGTGGCTCCTTTTTTGCTGGGCGCCAGGTaGTCGGACTTAAGCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: APAGWAEASGVGRLVAPFLLGAR*SDLSTL Trigger: CAAGGTGCTTAAGTCCGACCACCTGGCGCCCAGCAA...AAAAGGAGCCACTAATCTTCCTACCCCACTCGCCTCCGCCCATCCGGCAGGGGC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | GTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTCCCAAAAACAAAGTTCTCTTaGGGCAAGGCGGGTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VRLRWPRPSLMWGRGQLPKTKFS*GKAGWP Trigger: CGGCCAACCCGCCTTGCCCCAAGAGAACTTTGTTTT...TGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGCTGCAGATTTCCAAGACGTAAAGAGATCCGGCCCTCCCCTGCGCTGTGGGGCTCCGCCGATCTaGGCGGAGGGAAGACGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFAADFQDVKRSGPPLRCGAPPI*AEGRRA Trigger: AGCGCGTCTTCCCTCCGCCCAGATCGGCGGAGCCCC...ACAGCGCAGGGGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR TCA 90 bp | TGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTCTTGGGGCAAGGCGGGTTGGTGGCGAAGGGGTGCTTaGAGCCCGAGGGCTGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVWSPGSKTKFSWGKAGWWRRGA*SPRAAP Trigger: TGGCGCAGCCCTCGGGCTTCAAGCACCCCTTCGCCA...CCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR TCA 90 bp | GCCCCTGCCGGATGGGCGGAGGCGAGTGGGGTAGGAAGATTAGTGGCTCCTTTTTGTATTCCCGCGCGATaGTGTTCTCGATGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: APAGWAEASGVGRLVAPFCIPAR*CSRWRR Trigger: CCTTCGCCATCGAGAACATCATCGCGCGGGAATACA...AAAAGGAGCCACTAATCTTCCTACCCCACTCGCCTCCGCCCATCCGGCAGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR TCA 90 bp | GATGGTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTGGGAGAGCTATCCGGTaGCATCCCTTCATGTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: DGSAQVAPAFLDVGARTTGRAIR*HPFMLP Trigger: TGGTAACATGAAGGGATGTCACCGGATAGCTCTCCC...AGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | GAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGTCTCCGCTGAGCTAGGTGGCTaGCTCCATGTCCTCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: EDNSHAPLGPSASLCLVSAELGG*LHVLPR Trigger: TCGAGGGAGGACATGGAGGCAGCCACCTAGCTCAGC...GGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCAGCTTGGCAGCCTCTTTCCTAACTCCCAGCGCCTGGAGCCTCTGGAACCATGGAGATGGGGGTaGCCGAGTCGATCATGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQLGSLFPNSQRLEPLEPWRWG*PSRSCR Trigger: CCGGCATGATCGACTCGGCCACCCCCATCTCCATGG...TTCCAGAGGCTCCAGGCGCTGGGAGTTAGGAAAGAGGCTGCCAAGCTGAGAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | GAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGTCTCCCACTCGCCATGGAGATaGGGGTGGCCGAGTCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: EDNSHAPLGPSASLCLVSHSPWR*GWPSRS Trigger: TGATCGACTCGGCCACCCCCATCTCCATGGCGAGTG...GGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCAGCTTGGCAGCCTCTTTCCTAACTCCCAGCGCCTGGAGCCTCTGGAAGTGGCGGGGCTGCTTTaGCTGGTGGCTGTTTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQLGSLFPNSQRLEPLEVAGLL*LVAVCE Trigger: CTCGCAAACAGCCACCAGCCAAAGCAGCCCCGCCAC...TTCCAGAGGCTCCAGGCGCTGGGAGTTAGGAAAGAGGCTGCCAAGCTGAGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTCTTGGGGCAAGGCGGGTTGGGCGTTTCGCTGGGGGTaGCGGGGCTGCTTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVWSPGSKTKFSWGKAGWAFRWG*RGCFGW Trigger: CCAGCCAAAGCAGCCCCGCCACCCCCAGCGAAACGC...CCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTCTTGGGGCAAGGCGGGTTGGGAACGAGAGGGGGCGTaGGCTCCTGCGGGTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVWSPGSKTKFSWGKAGWEREGA*APAGQC Trigger: GCACTGACCCGCAGGAGCCCACGCCCCCTCTCGTTC...CCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR TCA 90 bp | ACTGCGCAGAGTTCGGGGCTCCGCCGATCTGGGCGGAGGGAAGACGCGCTTTTCTTTTGTTTTGCTGTGTaGGGACGAGCGTCGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TAQSSGLRRSGRREDALFFCFAV*GRASLS Trigger: AGAAAGCGACGCTCGTCCTCACACAGCAAAACAAAA...GAAAAGCGCGTCTTCCCTCCGCCCAGATCGGCGGAGCCCCGAACTCTGCGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACAGGCTCCGGAGGGCGCTaGTGTGGGCTCCGCGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVLVANRKTCPWESYPVTGSGGR*CGLRVS Trigger: GGAGACGCGGAGCCCACAGCAGCGCCCTCCGGAGCC...TGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAGAACTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | CTGCAAGTTTGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTCTTGGGGCAAGCTGCCCTTGCCTGGCTaGTCCGGCCGCCGCGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LQVCVWSPGSKTKFSWGKLPLPG*SGRRGI Trigger: GATCCCGCGGCGGCCGGACCAGCCAGGCAAGGGCAG...CTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACAAACTTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCAGCTTGGCAGCCTCTTTCCTAACTCCCAGCGCCTGGAGCCTCTGGAAGGCTGCTTTGGCTGGTaGCTGTTTGCGAGGACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQLGSLFPNSQRLEPLEGCFGW*LFARTW Trigger: CCACGTCCTCGCAAACAGCCACCAGCCAAAGCAGCC...TTCCAGAGGCTCCAGGCGCTGGGAGTTAGGAAAGAGGCTGCCAAGCTGAGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | CTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACATCCCTTAGCTTGGCCTGCTGCTaGAGGTACTGCGCCGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LVANRKTCPWESYPVTSLSLACC*RYCAAS Trigger: CGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCT...AAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR GCA 90 bp | TGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTCTTGGGGCAAGGCGGGTTGGTGGGGGTGGCGGGGCTaGTTTGGCTGGTGGCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CVWSPGSKTKFSWGKAGWWGWRG*FGWWLF Trigger: AAACAGCCACCAGCCAAAGCAGCCCCGCCACCCCCA...CCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR GCA 90 bp | AAAGTTCTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACATGCACCGCCACCGAGTaGAAGGCGGAGGCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVLVANRKTCPWESYPVTCTATE*KAEAGL Trigger: CAGCCCGGCCTCCGCCTTGCACTCGGTGGCGGTGCA...TGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAGAACTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | GAGCTATCCGGTGACATCCCTTCATGTTACCAGTCAGCTTATCTAAGTTCTTCCGAAGCTGCCCTTGCCTaGCTGGTCCGGCCGCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ELSGDIPSCYQSAYLSSSEAALA*LVRPPR Trigger: CCGCGGCGGCCGGACCAGCCAGGCAAGGGCAGCTTC...GGAAGAACTTAGATAAGCTGACTGGTAACATGAAGGGATGTCACCGGATAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | GAGCTATCCGGTGACATCCCTTCATGTTACCAGTCAGCTTATCTAAGTTCTTCCCTGCGCCGCGTCGGCTaGCTTGCTGGGCGCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELSGDIPSCYQSAYLSSSLRRVG*LAGRQV Trigger: CACCTGGCGCCCAGCAAGCCAGCCGACGCGGCGCAG...GGAAGAACTTAGATAAGCTGACTGGTAACATGAAGGGATGTCACCGGATAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | CTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACATCCCTTGGAGCCATACACGTGTaGCCAGCCGGTGCCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LVANRKTCPWESYPVTSLGAIHV*PAGAQR Trigger: TCGCTGGGCACCGGCTGGCCACACGTGTATGGCTCC...AAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | CTTTTTGCTGCAGATTTCCAAGACGTAAAGAGATCCGGCCCTCCCCTGCGCTGTAGTTCGAGAGCAAGGTaGGGATGGGCGCTGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LFAADFQDVKRSGPPLRCSSRAR*GWALAA Trigger: CGCTGCCAGCGCCCATCCCCACCTTGCTCTCGAACT...ACAGCGCAGGGGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CAA 72 bp | GTTTTGCTGTGTGAGGACGAGCGTCGCTTTCTCAGCTaGGCAGCCTCTTTCCTAACTCCCAGCGCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLCEDERRFLS*AASFLTPSAWS Trigger: GCTCCAGGCGCTGGGAGTTAGGAAAGAGGCTGCCAAGCTGAGAAAGCGACGCTCGTCCTCACACAGCAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR GCA 90 bp | CTTTTTGCTGCAGATTTCCAAGACGTAAAGAGATCCGGCCCTCCCCTGCGCTGTTGGCGCAGACTGTTCTaGCAGCGCTGCGTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFAADFQDVKRSGPPLRCWRRLF*QRCVFS Trigger: GGAGAACACGCAGCGCTGGCAGAACAGTCTGCGCCA...ACAGCGCAGGGGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | CTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACATCCCTTAGTCGCCACTCGCCATaGAGATGGGGGTGGCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVANRKTCPWESYPVTSLSRHSP*RWGWPS Trigger: ACTCGGCCACCCCCATCTCCATGGCGAGTGGCGACT...AAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CCA 90 bp | CTGCAAGTTTGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTCTTGGGGCAAGGTTTGGCCCGCCGCGTaGCACAGCGGCTTCAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQVCVWSPGSKTKFSWGKVWPAA*HSGFNG Trigger: GCCGTTGAAGCCGCTGTGCCACGCGGCGGGCCAAAC...CTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACAAACTTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | GTGGCTCCTTTTTGCTGCAGATTTCCAAGACGTAAAGAGATCCGGCCCTCCCCTCGGCCTTCCTTGATGTaGGGGCGAGGACAACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VAPFCCRFPRRKEIRPSPRPSLM*GRGQLP Trigger: TGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCG...AGGGGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAGGAGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | TCTCCGCAGAAGCCTAGGAGGCAGGGCCGCAACCCCGGGAAGCTGTGGTCGGCCCCCTTGATGCTTTCTTaGTTTGGGCTTATTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SPQKPRRQGRNPGKLWSAPLMLS*FGLISF Trigger: AAATGAAATAAGCCCAAACCAAGAAAGCATCAAGGG...GGCCGACCACAGCTTCCCGGGGTTGCGGCCCTGCCTCCTAGGCTTCTGCGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | GTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTCCCAGTATTTACATCTCTTTaGAGCCCTTTAGCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRLRWPRPSLMWGRGQLPVFTSL*SPLASW Trigger: CCAAGAAGCTAAAGGGCTGCAAAGAGATGTAAATAC...TGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | CTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACATCCCTTATGAACAAGTTAGGGTaGCGGTCCCAGGTGGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVANRKTCPWESYPVTSLMNKLG*RSQVGA Trigger: GGCCCCCACCTGGGACCGCCACCCTAACTTGTTCAT...AAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CAA 72 bp | TGGGTCCAAAACAAAGTTCTCTTGGGGCAAGGCGGGTaGGCCGAAGGTGAAATGAACAAGTTAGGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WVQNKVLLGQGG*AEGEMNKLGWR Trigger: CCGCCACCCTAACTTGTTCATTTCACCTTCGGCCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CAA 72 bp | GACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTaGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DNSHAPLGPSAS*CLVSWVQNKVL Trigger: GAGAACTTTGTTTTGGACCCAGGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| 3UTR CAA 72 bp | CTGTTCCTGGAAACATCTGAGGCAGTTTCTCTAGTCTaGAAACTGCGCAGAGTTCGGGGCTCCGCCGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFLETSEAVSLV*KLRRVRGSADL Trigger: CAGATCGGCGGAGCCCCGAACTCTGCGCAGTTTCAAGACTAGAGAAACTGCCTCAGATGTTTCCAGGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR TCA 90 bp | GTAAACATTCACATTACAACAGGTACTTATAATGTGGGCTTTGCCCGTTCGTCCGCTCCGCGTCTCCGCTaGGCTAGGTGGCTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VNIHITTGTYNVGFARSSAPRLR*ARWLPP Trigger: TGGAGGCAGCCACCTAGCTCAGCGGAGACGCGGAGC...GGACGAACGGGCAAAGCCCACATTATAAGTACCTGTTGTAATGTGAATGTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR TCA 90 bp | GTAAACATTCACATTACAACAGGTACTTATAATGTGGGCTTTGCCCGTTCGTCCGCGAACCTGGGCTCTTaGGCTCAGCCCCGCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VNIHITTGTYNVGFARSSANLGS*AQPRSV Trigger: GACGCTGCGGGGCTGAGCTCAAGAGCCCAGGTTCGC...GGACGAACGGGCAAAGCCCACATTATAAGTACCTGTTGTAATGTGAATGTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR TCA 90 bp | GTGGCTCCTTTTTGCTGCAGATTTCCAAGACGTAAAGAGATCCGGCCCTCCCCTCGGGTTGGCCGAAGGTaGAATGAACAAGTTAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VAPFCCRFPRRKEIRPSPRVGRR*NEQVRV Trigger: CACCCTAACTTGTTCATTTCACCTTCGGCCAACCCG...AGGGGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAGGAGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACACGCGGGCCGGCGGACTaGTCGGATCTTAAAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVLVANRKTCPWESYPVTRGPAD*SDLKVA Trigger: AGCAACTTTAAGATCCGAGCAGTCCGCCGGCCCGCG...TGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAGAACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | CTTTTTGCTGCAGATTTCCAAGACGTAAAGAGATCCGGCCCTCCCCTGCGCTGTAGCGCCTGGAGCCTCTaGAAGGAAACAAAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFAADFQDVKRSGPPLRCSAWSL*KETKPQ Trigger: TTGGGGTTTTGTTTCCTTCCAGAGGCTCCAGGCGCT...ACAGCGCAGGGGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | GGGGCGAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGAGCCCTTTAGCTTCTTaGAAAAGTTCTGGTAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GARTTPTRLSAHLQVCVWSPLAS*KSSGSK Trigger: TTTGCTACCAGAACTTTTCCAAGAAGCTAAAGGGCT...CCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTCGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR TCA 90 bp | CTTTCTCAGCTTGGCAGCCTCTTTCCTAACTCCCAGCGCCTGGAGCCTCTGGAAGTTCCTGGAAACATCTaGGGCAGTTTCTCTAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSQLGSLFPNSQRLEPLEVPGNI*GSFSSL Trigger: AAGACTAGAGAAACTGCCTCAGATGTTTCCAGGAAC...TTCCAGAGGCTCCAGGCGCTGGGAGTTAGGAAAGAGGCTGCCAAGCTGAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | GAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGTCTCCTTGTGTTTGGTCTCCTaGGTCCAAAACAAAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EDNSHAPLGPSASLCLVSLCLVS*VQNKVL Trigger: GAGAACTTTGTTTTGGACCCAGGAGACCAAACACAA...GGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR GCA 90 bp | CTTTCTCAGCTTGGCAGCCTCTTTCCTAACTCCCAGCGCCTGGAGCCTCTGGAATTAGTGGCTCCTTTTTaGTGCAGATTTCCAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: LSQLGSLFPNSQRLEPLELVAPF*CRFPRR Trigger: ACGTCTTGGAAATCTGCAGCAAAAAGGAGCCACTAA...TTCCAGAGGCTCCAGGCGCTGGGAGTTAGGAAAGAGGCTGCCAAGCTGAGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | GAGCTATCCGGTGACATCCCTTCATGTTACCAGTCAGCTTATCTAAGTTCTTCCTTCTCGGGAGAGCTCTaGATGGCCATAGCGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELSGDIPSCYQSAYLSSSFSGEL*MAIAVS Trigger: GCTGACCGCTATGGCCATCCAGAGCTCTCCCGAGAA...GGAAGAACTTAGATAAGCTGACTGGTAACATGAAGGGATGTCACCGGATAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | CTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACATCCCTTAGAAAGACTTGTCCGTaGGAGAGCTATCCGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LVANRKTCPWESYPVTSLRKTCP*ESYPVT Trigger: TGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCT...AAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CAA 72 bp | TTGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTCTaGGGGCAAGGCGGGTTGGCCGAAGGTGAAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCLVSWVQNKVL*GQGGLAEGEMN Trigger: GTTCATTTCACCTTCGGCCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CCA 90 bp | GTAAACATTCACATTACAACAGGTACTTATAATGTGGGCTTTGCCCGTTCGTCCCTAACTCCCAGCGCCTaGAGCCTCTGGAAGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VNIHITTGTYNVGFARSSLTPSA*SLWKET Trigger: TGTTTCCTTCCAGAGGCTCCAGGCGCTGGGAGTTAG...GGACGAACGGGCAAAGCCCACATTATAAGTACCTGTTGTAATGTGAATGTTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR GCA 90 bp | CTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACATCCCTTGTTTTAAAACAGGCATaGTGGGAACAAGAACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVANRKTCPWESYPVTSLVLKQA*WEQEHQ Trigger: TTGATGTTCTTGTTCCCAGCATGCCTGTTTTAAAAC...AAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| 3UTR CAA 72 bp | ACATTCACATTACAACAGGTACTTATAATGTGGGCTTaGCCCGTTCGTCCGCCTAGCAAGACAGATTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TFTLQQVLIMWA*PVRPPSKTDSS Trigger: ACTTGAATCTGTCTTGCTAGGCGGACGAACGGGCAAAGCCCACATTATAAGTACCTGTTGTAATGTGAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR GCA 90 bp | GTAAACATTCACATTACAACAGGTACTTATAATGTGGGCTTTGCCCGTTCGTCCGTGGCTCCTTTTTGCTaGAGATTTCCAAGACGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VNIHITTGTYNVGFARSSVAPFC*RFPRRK Trigger: TTTACGTCTTGGAAATCTGCAGCAAAAAGGAGCCAC...GGACGAACGGGCAAAGCCCACATTATAAGTACCTGTTGTAATGTGAATGTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS GCA 90 bp | CGCAGCGTCCCGTGCCGCCCGGTCCGCGACGCTCCTGGAGCGTCCTaGGGGCGGCCGAGCTCGGCTGCGGAGTCCCGGCGCGGATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSVPCRPVRDAPGAS*GRPSSAAESRRGWW Trigger: CCACCATCCGCGCCGGGACTCCGCAGCCGAGCTCGGCCGCCCGCAGGACGCTCCAGGAGCGTCGCGGACCGGGCGGCACGGGACGCTGCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
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| CDS CCA 90 bp | AGCTCAGCCCCGCAGCGTCCCGTGCCGCCCGGTCCGCGACGCTCCTaGAGCGTCCTGCGGGCGGCCGAGCTCGGCTGCGGAGTCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSAPQRPVPPGPRRS*SVLRAAELGCGVPA Trigger: CGCCGGGACTCCGCAGCCGAGCTCGGCCGCCCGCAGGACGCTCCAGGAGCGTCGCGGACCGGGCGGCACGGGACGCTGCGGGGCTGAGCT 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
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| CDS TCA 90 bp | GCGCAGCGTCCGGGTCCGGTTGGACTCGGCGCGAACCTGGGCTCTTaGGCTCAGCCCCGCAGCGTCCCGTGCCGCCCGGTCCGCGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: AQRPGPVGLGANLGS*AQPRSVPCRPVRDA Trigger: AGCGTCGCGGACCGGGCGGCACGGGACGCTGCGGGGCTGAGCTCAAGAGCCCAGGTTCGCGCCGAGTCCAACCGGACCCGGACGCTGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
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| CDS TCA 90 bp | CGGCGGGCATCTGTGGCAGGTGCGTGCCCGAGGCCGCCAGCGCGCTaGGCCGCAGCTTGGCCTGCTGCTGCAGGTACTGCGCCGCGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRASVAGACPRPPAR*AAAWPAAAGTAPRR Trigger: CCGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCGGCTCAGCGCGCTGGCGGCCTCGGGCACGCACCTGCCACAGATGCCCGCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS GCA 90 bp | GTGCCCGAGGCCGCCAGCGCGCTGAGCCGCAGCTTGGCCTGCTGCTaGAGGTACTGCGCCGCGTCGGCTGGCTTGCTGGGCGCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPEAASALSRSLACC*RYCAASAGLLGARW Trigger: CCACCTGGCGCCCAGCAAGCCAGCCGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCGGCTCAGCGCGCTGGCGGCCTCGGGCAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS GCA 90 bp | TGCGTGCCCGAGGCCGCCAGCGCGCTGAGCCGCAGCTTGGCCTGCTaGTGCAGGTACTGCGCCGCGTCGGCTGGCTTGCTGGGCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CVPEAASALSRSLAC*CRYCAASAGLLGAR Trigger: CCTGGCGCCCAGCAAGCCAGCCGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCGGCTCAGCGCGCTGGCGGCCTCGGGCACGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS GCA 90 bp | AGGTGCGTGCCCGAGGCCGCCAGCGCGCTGAGCCGCAGCTTGGCCTaGTGCTGCAGGTACTGCGCCGCGTCGGCTGGCTTGCTGGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RCVPEAASALSRSLA*CCRYCAASAGLLGA Trigger: GGCGCCCAGCAAGCCAGCCGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCGGCTCAGCGCGCTGGCGGCCTCGGGCACGCACCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS CCA 90 bp | CACTCCGCGCGCAGCGTCCGGGTCCGGTTGGACTCGGCGCGAACCTaGGCTCTTGAGCTCAGCCCCGCAGCGTCCCGTGCCGCCCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSARSVRVRLDSART*ALELSPAASRAARS Trigger: GGACCGGGCGGCACGGGACGCTGCGGGGCTGAGCTCAAGAGCCCAGGTTCGCGCCGAGTCCAACCGGACCCGGACGCTGCGCGCGGAGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
||
| CDS CCA 90 bp | GGGCTGCGCCACGCCGCCCAAGTTGTAGGCGGCGGCGGGCATCTGTaGCAGGTGCGTGCCCGAGGCCGCCAGCGCGCTGAGCCGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GLRHAAQVVGGGGHL*QVRARGRQRAEPQL Trigger: AAGCTGCGGCTCAGCGCGCTGGCGGCCTCGGGCACGCACCTGCCACAGATGCCCGCCGCCGCCTACAACTTGGGCGGCGTGGCGCAGCCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS GCA 90 bp | CGAGAGGGGGCGTGGGCTCCTGCGGGTCAGTGCACCGCCACCGAGTaGAAGGCGGAGGCCGGGCTGGTGAGCGTTTCGCTGGGGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: REGAWAPAGQCTATE*KAEAGLVSVSLGVA Trigger: CGCCACCCCCAGCGAAACGCTCACCAGCCCGGCCTCCGCCTTGCACTCGGTGGCGGTGCACTGACCCGCAGGAGCCCACGCCCCCTCTCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS CCA 90 bp | GGCGCGCACTCGACGCGCACTCCGCGCGCAGCGTCCGGGTCCGGTTaGACTCGGCGCGAACCTGGGCTCTTGAGCTCAGCCCCGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GAHSTRTPRAASGSG*TRREPGLLSSAPQR Trigger: ACGCTGCGGGGCTGAGCTCAAGAGCCCAGGTTCGCGCCGAGTCCAACCGGACCCGGACGCTGCGCGCGGAGTGCGCGTCGAGTGCGCGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
||
| CDS CCA 90 bp | GCTGAGCGAGGGCGGCGAGTTCGAGAGCAAGGTGGGGATGGGCGCTaGCAGCGCAGGCAGCGCGGGCACGGCGGCCGGCGTGGGCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: AERGRRVREQGGDGR*QRRQRGHGGRRGLN Trigger: ATTAAGCCCACGCCGGCCGCCGTGCCCGCGCTGCCTGCGCTGCCAGCGCCCATCCCCACCTTGCTCTCGAACTCGCCGCCCTCGCTCAGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS GCA 90 bp | GCCGCCAGCGCGCTGAGCCGCAGCTTGGCCTGCTGCTGCAGGTACTaGGCCGCGTCGGCTGGCTTGCTGGGCGCCAGGTGGTCGGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: AASALSRSLACCCRY*AASAGLLGARWSDL Trigger: TAAGTCCGACCACCTGGCGCCCAGCAAGCCAGCCGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCGGCTCAGCGCGCTGGCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CAA 90 bp | TCTCCGCAGAAGCCTAGGAGGCAGGGCCGCAACCCCGGGAAGCTGTGGTCGGCCGATGGCGGGCAGCGTTaGGCCCGCCGCGTGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SPQKPRRQGRNPGKLWSADGGQR*ARRVAQ Trigger: CTGTGCCACGCGGCGGGCCAAACGCTGCCCGCCATC...GGCCGACCACAGCTTCCCGGGGTTGCGGCCCTGCCTCCTAGGCTTCTGCGGAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CAA 90 bp | GTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTCCCAAGCGTCCGGGTCCGGTaGGACTCGGCGCGAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRLRWPRPSLMWGRGQLPSVRVR*DSARTW Trigger: CCAGGTTCGCGCCGAGTCCAACCGGACCCGGACGCT...TGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS GCA 90 bp | TTAAAGTTGCTTCAAGTTGCGCGTCCGCATCCGGGAGGACGCCGCTaGGCGCCGCTTCTCTCTCGGCGCGCACTCGACGCGCACTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LKLLQVARPHPGGRR*APLLSRRALDAHSA Trigger: CGCGGAGTGCGCGTCGAGTGCGCGCCGAGAGAGAAGCGGCGCGCAGCGGCGTCCTCCCGGATGCGGACGCGCAACTTGAAGCAACTTTAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
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| CDS GCA 90 bp | TGTAGTCGCCACTCGCCATGGAGATGGGGGTGGCCGAGTCGATCATaGCGGCGGAGCCATACACGTGTGGCCAGCCGGTGCCCAGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSRHSPWRWGWPSRS*RRSHTRVASRCPAS Trigger: GCTCGCTGGGCACCGGCTGGCCACACGTGTATGGCTCCGCCGGCATGATCGACTCGGCCACCCCCATCTCCATGGCGAGTGGCGACTACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CCA 90 bp | GAGCCGCAGCTTGGCCTGCTGCTGCAGGTACTGCGCCGCGTCGGCTaGCTTGCTGGGCGCCAGGTGGTCGGACTTAAGCACCTTGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: EPQLGLLLQVLRRVG*LAGRQVVGLKHLEA Trigger: CGCTTCAAGGTGCTTAAGTCCGACCACCTGGCGCCCAGCAAGCCAGCCGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCGGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS CCA 90 bp | GCACGCCGTAGGCGCTGTAGTCGCCACTCGCCATGGAGATGGGGGTaGCCGAGTCGATCATGCCGGCGGAGCCATACACGTGTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARRRRCSRHSPWRWG*PSRSCRRSHTRVAS Trigger: GCTGGCCACACGTGTATGGCTCCGCCGGCATGATCGACTCGGCCACCCCCATCTCCATGGCGAGTGGCGACTACAGCGCCTACGGCGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CAA 90 bp | GTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTCCCAGCGCTGAGCCGCAGCTaGGCCTGCTGCTGCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VRLRWPRPSLMWGRGQLPALSRS*ACCCRY Trigger: GTACCTGCAGCAGCAGGCCAAGCTGCGGCTCAGCGC...TGGGAGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS CCA 90 bp | GCGGCTTCAACGGCACGCCGTAGGCGCTGTAGTCGCCACTCGCCATaGAGATGGGGGTGGCCGAGTCGATCATGCCGGCGGAGCCATACA | + |
|
Preference number: 5 (lower is better) Translates to: AASTARRRRCSRHSP*RWGWPSRSCRRSHT Trigger: TGTATGGCTCCGCCGGCATGATCGACTCGGCCACCCCCATCTCCATGGCGAGTGGCGACTACAGCGCCTACGGCGTGCCGTTGAAGCCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGTCTCCCCCTCCCCTGCGCTGTaGCAGCCCTCGCGGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EDNSHAPLGPSASLCLVSPSPAL*QPSRGG Trigger: CCCTCCCCGCGAGGGCTGCAACAGCGCAGGGGAGGG...GGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS CCA 90 bp | GATGGGGGTGGCCGAGTCGATCATGCCGGCGGAGCCATACACGTGTaGCCAGCCGGTGCCCAGCGAGCTGCCCATGGTAGTCAACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DGGGRVDHAGGAIHV*PAGAQRAAHGSQLV Trigger: AACCAGTTGACTACCATGGGCAGCTCGCTGGGCACCGGCTGGCCACACGTGTATGGCTCCGCCGGCATGATCGACTCGGCCACCCCCATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS CCA 90 bp | TCAACGGCACGCCGTAGGCGCTGTAGTCGCCACTCGCCATGGAGATaGGGGTGGCCGAGTCGATCATGCCGGCGGAGCCATACACGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: STARRRRCSRHSPWR*GWPSRSCRRSHTRV Trigger: CACACGTGTATGGCTCCGCCGGCATGATCGACTCGGCCACCCCCATCTCCATGGCGAGTGGCGACTACAGCGCCTACGGCGTGCCGTTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCGCCGATCTGGGCGGAGGGAAGACGCGCTTTTCTCGGCGAAGAGGGGGTTGGGGCAAGGCGGGTaGGCCGAAGGTGAAATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GLRRSGRREDALFSAKRGLGQGG*AEGEMN Trigger: GTTCATTTCACCTTCGGCCAACCCGCCTTGCCCCAA...CCCCCTCTTCGCCGAGAAAAGCGCGTCTTCCCTCCGCCCAGATCGGCGGAGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS TCA 90 bp | GTGTTAGGGCTCCGGAGGGCGCTGCTGTGGGCTCCGCGTCTCCGCTaGGCTAGGTGGCTGCCTCCATGTCCTCCCTCGAACCATCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: VLGLRRALLWAPRLR*ARWLPPCPPSNHLI Trigger: TATCAGATGGTTCGAGGGAGGACATGGAGGCAGCCACCTAGCTCAGCGGAGACGCGGAGCCCACAGCAGCGCCCTCCGGAGCCCTAACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560857.1 |
||
| CDS CCA 90 bp | TTGCGGCCGGGCCGAGGCATCTTCTTCCTCGCCCTCTTCTTGCTCTaGGTCCGCGCGGGCCGGCGGACTGCTCGGATCTTAAAGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRPGRGIFFLALFLL*VRAGRRTARILKLL Trigger: AAGCAACTTTAAGATCCGAGCAGTCCGCCGGCCCGCGCGGACCCAGAGCAAGAAGAGGGCGAGGAAGAAGATGCCTCGGCCCGGCCGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CAA 90 bp | TCTCCGCAGAAGCCTAGGAGGCAGGGCCGCAACCCCGGGAAGCTGTGGTCGGCCCTTATAATGTGGGCTTaGCCCGTTCGTCCGCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPQKPRRQGRNPGKLWSALIMWA*PVRPPS Trigger: GCTAGGCGGACGAACGGGCAAAGCCCACATTATAAG...GGCCGACCACAGCTTCCCGGGGTTGCGGCCCTGCCTCCTAGGCTTCTGCGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGTCTCCTGGTCGCTGTACGTGTaGCGGCCGGGCCGAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: EDNSHAPLGPSASLCLVSWSLYV*RPGRGI Trigger: GATGCCTCGGCCCGGCCGCAACACGTACAGCGACCA...GGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CAA 90 bp | GTGGCTCCTTTTTGCTGCAGATTTCCAAGACGTAAAGAGATCCGGCCCTCCCCTGCCGCGTCGGCTGGCTaGCTGGGCGCCAGGTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VAPFCCRFPRRKEIRPSPAASAG*LGARWS Trigger: CGACCACCTGGCGCCCAGCAAGCCAGCCGACGCGGC...AGGGGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAGGAGCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CAA 90 bp | GCCCCTGCCGGATGGGCGGAGGCGAGTGGGGTAGGAAGATTAGTGGCTCCTTTTTTGGCTGGTGGCTGTTaGCGAGGACGTGGGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: APAGWAEASGVGRLVAPFLAGGC*RGRGAE Trigger: CTCAGCCCCACGTCCTCGCAAACAGCCACCAGCCAA...AAAAGGAGCCACTAATCTTCCTACCCCACTCGCCTCCGCCCATCCGGCAGGGGC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGTCTCCGGTGGCGGGGCTGCTTaGGCTGGTGGCTGTTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: EDNSHAPLGPSASLCLVSGGGAA*AGGCLR Trigger: TCGCAAACAGCCACCAGCCAAAGCAGCCCCGCCACC...GGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CAA 90 bp | GATGGTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTGCTCGGATCTTAAAGTaGCTTCAAGTTGCGCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: DGSAQVAPAFLDVGARTTARILK*LQVARP Trigger: CGGACGCGCAACTTGAAGCAACTTTAAGATCCGAGC...AGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CAA 90 bp | TGTGTTTGGTCTCCTGGGTCCAAAACAAAGTTCTCTTGGGGCAAGGCGGGTTGGTTCCTCGCCCTCTTCTaGCTCTGGGTCCGCGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CVWSPGSKTKFSWGKAGWFLALF*LWVRAG Trigger: GCCCGCGCGGACCCAGAGCAAGAAGAGGGCGAGGAA...CCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTGGACCCAGGAGACCAAACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CAA 90 bp | GAGGACAACTCCCACGCGCCTCTCGGCCCATCTGCAAGTTTGTGTTTGGTCTCCGGCCCATCTGCAAGTTaGTGTTTGGTCTCCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EDNSHAPLGPSASLCLVSGPSAS*CLVSWV Trigger: GACCCAGGAGACCAAACACAAACTTGCAGATGGGCC...GGAGACCAAACACAAACTTGCAGATGGGCCGAGAGGCGCGTGGGAGTTGTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CAA 90 bp | CTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACATCCCTTTGGCCCCGGCCTTCCTaGATGTGGGGGCGAGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: LVANRKTCPWESYPVTSLWPRPS*MWGRGQ Trigger: TTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCA...AAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CAA 90 bp | AAAGTTCTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACACGCGAACCTGGGCTCTaGAGCTCAGCCCCGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: KVLVANRKTCPWESYPVTREPGL*SSAPQR Trigger: ACGCTGCGGGGCTGAGCTCAAGAGCCCAGGTTCGCG...TGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAGAACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CAA 90 bp | GATGGTTCGGCTCAGGTGGCCCCGGCCTTCCTTGATGTGGGGGCGAGGACAACTACTTTTAGTTTTGTTTaGCTGTGTGAGGACGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: DGSAQVAPAFLDVGARTTTFSFV*LCEDER Trigger: ACGCTCGTCCTCACACAGCAAAACAAAACTAAAAGT...AGTTGTCCTCGCCCCCACATCAAGGAAGGCCGGGGCCACCTGAGCCGAACCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CAA 90 bp | ACTGCGCAGAGTTCGGGGCTCCGCCGATCTGGGCGGAGGGAAGACGCGCTTTTCAGTATTTACATCTCTTaGCAGCCCTTTAGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TAQSSGLRRSGRREDALFSIYIS*QPFSFL Trigger: CAAGAAGCTAAAGGGCTGCAAAGAGATGTAAATACT...GAAAAGCGCGTCTTCCCTCCGCCCAGATCGGCGGAGCCCCGAACTCTGCGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CAA 90 bp | CTTTTTGCTGCAGATTTCCAAGACGTAAAGAGATCCGGCCCTCCCCTGCGCTGTCAAAACAAAGTTCTCTaGGGGCAAGGCGGGTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFAADFQDVKRSGPPLRCQNKVL*GQGGLA Trigger: GGCCAACCCGCCTTGCCCCAAGAGAACTTTGTTTTG...ACAGCGCAGGGGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CAA 90 bp | GTGGCTCCTTTTTGCTGCAGATTTCCAAGACGTAAAGAGATCCGGCCCTCCCCTCTTCCCGGGTTGCCCTaGATGCTTTCTTGGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAPFCCRFPRRKEIRPSPLPGLP*MLSWFG Trigger: CCCAAACCAAGAAAGCATCAAGGGCAACCCGGGAAG...AGGGGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAGGAGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS GCA 90 bp | CATTGGCATCAGGTCCTGGGGAGGCTGACTGTAGCCAGTTATCTCTaGTTGCAAAGGAAGTGGAAGGTTCCGATGGGCTTTCTGACCCTA | + |
|
Preference number: 5 (lower is better) Translates to: HWHQVLGRLTVASYL*LQRKWKVPMGFLTL Trigger: TAGGGTCAGAAAGCCCATCGGAACCTTCCACTTCCTTTGCAAGCAGAGATAACTGGCTACAGTCAGCCTCCCCAGGACCTGATGCCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560857.1 |
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| CDS CCA 90 bp | CTGGGGAGGCTGACTGTAGCCAGTTATCTCTGCTTGCAAAGGAAGTaGAAGGTTCCGATGGGCTTTCTGACCCTAAGTCGACTTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGRLTVASYLCLQRK*KVPMGFLTLSRLCC Trigger: GCAACAAAGTCGACTTAGGGTCAGAAAGCCCATCGGAACCTTCCACTTCCTTTGCAAGCAGAGATAACTGGCTACAGTCAGCCTCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560857.1 |
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| CDS-3UTR CAA 90 bp | CTTTCTCAGCTTGGCAGCCTCTTTCCTAACTCCCAGCGCCTGGAGCCTCTGGAAATTAGTGGCTCCTTTTaGCTGCAGATTTCCAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: LSQLGSLFPNSQRLEPLEISGSF*LQISKT Trigger: CGTCTTGGAAATCTGCAGCAAAAAGGAGCCACTAAT...TTCCAGAGGCTCCAGGCGCTGGGAGTTAGGAAAGAGGCTGCCAAGCTGAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CAA 90 bp | CTTTTTGCTGCAGATTTCCAAGACGTAAAGAGATCCGGCCCTCCCCTGCGCTGTAGCAAACAGAAAGACTaGTCCGTGGGAGAGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: LFAADFQDVKRSGPPLRCSKQKD*SVGELS Trigger: GGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCT...ACAGCGCAGGGGAGGGCCGGATCTCTTTACGTCTTGGAAATCTGCAGCAAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS-3UTR CAA 90 bp | CTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACATCCCTTGCAGTTTCTCTAGTCTaGAAACTGCGCAGAGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LVANRKTCPWESYPVTSLAVSLV*KLRRVR Trigger: CCGAACTCTGCGCAGTTTCAAGACTAGAGAAACTGC...AAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CCA 90 bp | ACAACATGGCAAGAACCATCTCCTTCTGATCTTGCAGTTATCCATTaGCATCAGGTCCTGGGGAGGCTGACTGTAGCCAGTTATCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TTWQEPSPSDLAVIH*HQVLGRLTVASYLC Trigger: GCAGAGATAACTGGCTACAGTCAGCCTCCCCAGGACCTGATGCCAATGGATAACTGCAAGATCAGAAGGAGATGGTTCTTGCCATGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560857.1 |
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| CDS-3UTR CAA 90 bp | AAAGTTCTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACACGTCGCTTTCTCAGCTaGGCAGCCTCTTTCCTAACT | + |
|
Preference number: 5 (lower is better) Translates to: KVLVANRKTCPWESYPVTRRFLS*AASFLT Trigger: AGTTAGGAAAGAGGCTGCCAAGCTGAGAAAGCGACG...TGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAGAACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS-3UTR CAA 90 bp | CTGGTAGCAAACAGAAAGACTTGTCCGTGGGAGAGCTATCCGGTGACATCCCTTGCCCTTGATGCTTTCTaGGTTTGGGCTTATTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LVANRKTCPWESYPVTSLALDAF*VWAYFI Trigger: AATGAAATAAGCCCAAACCAAGAAAGCATCAAGGGC...AAGGGATGTCACCGGATAGCTCTCCCACGGACAAGTCTTTCTGTTTGCTACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS CCA 72 bp | GGGCGGCGAGTTCGAGAGCAAGGTGGGGATGGGCGCTaGCAGCGCAGGCAGCGCGGGCACGGCGGCCGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: GRRVREQGGDGR*QRRQRGHGGRR Trigger: ACGCCGGCCGCCGTGCCCGCGCTGCCTGCGCTGCCAGCGCCCATCCCCACCTTGCTCTCGAACTCGCCGCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CAA 90 bp | CGCGCAGCGTCCGGGTCCGGTTGGACTCGGCGCGAACCTGGGCTCTaGAGCTCAGCCCCGCAGCGTCCCGTGCCGCCCGGTCCGCGACGC | + |
|
Preference number: 6 (lower is better) Translates to: RAASGSGWTRREPGL*SSAPQRPVPPGPRR Trigger: GCGTCGCGGACCGGGCGGCACGGGACGCTGCGGGGCTGAGCTCAAGAGCCCAGGTTCGCGCCGAGTCCAACCGGACCCGGACGCTGCGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
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| CDS CAA 90 bp | CGGCGCGCACTCGACGCGCACTCCGCGCGCAGCGTCCGGGTCCGGTaGGACTCGGCGCGAACCTGGGCTCTTGAGCTCAGCCCCGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRALDAHSARSVRVR*DSARTWALELSPAA Trigger: CGCTGCGGGGCTGAGCTCAAGAGCCCAGGTTCGCGCCGAGTCCAACCGGACCCGGACGCTGCGCGCGGAGTGCGCGTCGAGTGCGCGCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
||
| CDS GCA 72 bp | CGCTCCTGGAGCGTCCTGCGGGCGGCCGAGCTCGGCTaGGGAGTCCCGGCGCGGATGGTGGCAGCGACGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RSWSVLRAAELG*GVPARMVAATC Trigger: ACACGTCGCTGCCACCATCCGCGCCGGGACTCCGCAGCCGAGCTCGGCCGCCCGCAGGACGCTCCAGGAGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
||
| CDS TCA 72 bp | CCGGGTCCGGTTGGACTCGGCGCGAACCTGGGCTCTTaGGCTCAGCCCCGCAGCGTCCCGTGCCGCCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PGPVGLGANLGS*AQPRSVPCRPV Trigger: GACCGGGCGGCACGGGACGCTGCGGGGCTGAGCTCAAGAGCCCAGGTTCGCGCCGAGTCCAACCGGACCCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
||
| CDS GCA 72 bp | GCCGCCAGCGCGCTGAGCCGCAGCTTGGCCTGCTGCTaGAGGTACTGCGCCGCGTCGGCTGGCTTGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AASALSRSLACC*RYCAASAGLLG Trigger: GCCCAGCAAGCCAGCCGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCGGCTCAGCGCGCTGGCGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS CCA 72 bp | CGGCCGAGCTCGGCTGCGGAGTCCCGGCGCGGATGGTaGCAGCGACGTGTTAGGGCTCCGGAGGGCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPSSAAESRRGW*QRRVRAPEGAA Trigger: AGCAGCGCCCTCCGGAGCCCTAACACGTCGCTGCCACCATCCGCGCCGGGACTCCGCAGCCGAGCTCGGCCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
||
| CDS CCA 72 bp | CACGCCGCCCAAGTTGTAGGCGGCGGCGGGCATCTGTaGCAGGTGCGTGCCCGAGGCCGCCAGCGCGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: HAAQVVGGGGHL*QVRARGRQRAE Trigger: CTCAGCGCGCTGGCGGCCTCGGGCACGCACCTGCCACAGATGCCCGCCGCCGCCTACAACTTGGGCGGCGTG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS CAA 72 bp | TGCGTGCCCGAGGCCGCCAGCGCGCTGAGCCGCAGCTaGGCCTGCTGCTGCAGGTACTGCGCCGCGTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CVPEAASALSRS*ACCCRYCAASA Trigger: AGCCGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCGGCTCAGCGCGCTGGCGGCCTCGGGCACGCA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS GCA 72 bp | GAGGCCGCCAGCGCGCTGAGCCGCAGCTTGGCCTGCTaGTGCAGGTACTGCGCCGCGTCGGCTGGCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EAASALSRSLAC*CRYCAASAGLL Trigger: CAGCAAGCCAGCCGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCGGCTCAGCGCGCTGGCGGCCTC 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
||
| CDS GCA 72 bp | GGAGAACGAGAGGGGGCGTGGGCTCCTGCGGGTCAGTaGACCGCCACCGAGTGCAAGGCGGAGGCCGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GEREGAWAPAGQ*TATECKAEAGL Trigger: CAGCCCGGCCTCCGCCTTGCACTCGGTGGCGGTGCACTGACCCGCAGGAGCCCACGCCCCCTCTCGTTCTCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CCA 72 bp | CGCAGCGTCCGGGTCCGGTTGGACTCGGCGCGAACCTaGGCTCTTGAGCTCAGCCCCGCAGCGTCCCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: RSVRVRLDSART*ALELSPAASRA Trigger: GGCACGGGACGCTGCGGGGCTGAGCTCAAGAGCCCAGGTTCGCGCCGAGTCCAACCGGACCCGGACGCTGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
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| CDS CAA 72 bp | TCCGGGTCCGGTTGGACTCGGCGCGAACCTGGGCTCTaGAGCTCAGCCCCGCAGCGTCCCGTGCCGCCCGGT | + |
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Preference number: 6 (lower is better) Translates to: SGSGWTRREPGL*SSAPQRPVPPG Trigger: ACCGGGCGGCACGGGACGCTGCGGGGCTGAGCTCAAGAGCCCAGGTTCGCGCCGAGTCCAACCGGACCCGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
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| CDS CAA 90 bp | TGTGGCAGGTGCGTGCCCGAGGCCGCCAGCGCGCTGAGCCGCAGCTaGGCCTGCTGCTGCAGGTACTGCGCCGCGTCGGCTGGCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: CGRCVPEAASALSRS*ACCCRYCAASAGLL Trigger: CAGCAAGCCAGCCGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCGGCTCAGCGCGCTGGCGGCCTCGGGCACGCACCTGCCACA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS TCA 72 bp | TCTGTGGCAGGTGCGTGCCCGAGGCCGCCAGCGCGCTaGGCCGCAGCTTGGCCTGCTGCTGCAGGTACTGCG | + |
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Preference number: 6 (lower is better) Translates to: SVAGACPRPPAR*AAAWPAAAGTA Trigger: CGCAGTACCTGCAGCAGCAGGCCAAGCTGCGGCTCAGCGCGCTGGCGGCCTCGGGCACGCACCTGCCACAGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS GCA 72 bp | CTTCAAGTTGCGCGTCCGCATCCGGGAGGACGCCGCTaGGCGCCGCTTCTCTCTCGGCGCGCACTCGACGCG | + |
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Preference number: 6 (lower is better) Translates to: LQVARPHPGGRR*APLLSRRALDA Trigger: CGCGTCGAGTGCGCGCCGAGAGAGAAGCGGCGCGCAGCGGCGTCCTCCCGGATGCGGACGCGCAACTTGAAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
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| CDS GCA 72 bp | GCGTGGGCTCCTGCGGGTCAGTGCACCGCCACCGAGTaGAAGGCGGAGGCCGGGCTGGTGAGCGTTTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: AWAPAGQCTATE*KAEAGLVSVSL Trigger: CAGCGAAACGCTCACCAGCCCGGCCTCCGCCTTGCACTCGGTGGCGGTGCACTGACCCGCAGGAGCCCACGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CCA 72 bp | TCGACGCGCACTCCGCGCGCAGCGTCCGGGTCCGGTTaGACTCGGCGCGAACCTGGGCTCTTGAGCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: STRTPRAASGSG*TRREPGLLSSA Trigger: GGCTGAGCTCAAGAGCCCAGGTTCGCGCCGAGTCCAACCGGACCCGGACGCTGCGCGCGGAGTGCGCGTCGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
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| CDS CAA 72 bp | CTCGACGCGCACTCCGCGCGCAGCGTCCGGGTCCGGTaGGACTCGGCGCGAACCTGGGCTCTTGAGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LDAHSARSVRVR*DSARTWALELS Trigger: GCTGAGCTCAAGAGCCCAGGTTCGCGCCGAGTCCAACCGGACCCGGACGCTGCGCGCGGAGTGCGCGTCGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
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| CDS CCA 72 bp | GTGGGCTTAATGGGCACGGGGATGGCGGGCAGCGTTTaGCCCGCCGCGTGGCACAGCGGCTTCAACGGCACG | + |
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Preference number: 6 (lower is better) Translates to: VGLMGTGMAGSV*PAAWHSGFNGT Trigger: CGTGCCGTTGAAGCCGCTGTGCCACGCGGCGGGCCAAACGCTGCCCGCCATCCCCGTGCCCATTAAGCCCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CAA 72 bp | CGTGGGCTTAATGGGCACGGGGATGGCGGGCAGCGTTaGGCCCGCCGCGTGGCACAGCGGCTTCAACGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RGLNGHGDGGQR*ARRVAQRLQRH Trigger: GTGCCGTTGAAGCCGCTGTGCCACGCGGCGGGCCAAACGCTGCCCGCCATCCCCGTGCCCATTAAGCCCACG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS TCA 72 bp | CTCCGGAGGGCGCTGCTGTGGGCTCCGCGTCTCCGCTaGGCTAGGTGGCTGCCTCCATGTCCTCCCTCGAAC | + |
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Preference number: 6 (lower is better) Translates to: LRRALLWAPRLR*ARWLPPCPPSN Trigger: GTTCGAGGGAGGACATGGAGGCAGCCACCTAGCTCAGCGGAGACGCGGAGCCCACAGCAGCGCCCTCCGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396057.6 ENST00000560857.1 |
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| CDS CCA 72 bp | ACGGCACGCCGTAGGCGCTGTAGTCGCCACTCGCCATaGAGATGGGGGTGGCCGAGTCGATCATGCCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: TARRRRCSRHSP*RWGWPSRSCRR Trigger: CCGCCGGCATGATCGACTCGGCCACCCCCATCTCCATGGCGAGTGGCGACTACAGCGCCTACGGCGTGCCGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS GCA 72 bp | CACTCGCCATGGAGATGGGGGTGGCCGAGTCGATCATaGCGGCGGAGCCATACACGTGTGGCCAGCCGGTGC | + |
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Preference number: 6 (lower is better) Translates to: HSPWRWGWPSRS*RRSHTRVASRC Trigger: GCACCGGCTGGCCACACGTGTATGGCTCCGCCGGCATGATCGACTCGGCCACCCCCATCTCCATGGCGAGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CCA 72 bp | TACTGCGCCGCGTCGGCTGGCTTGCTGGGCGCCAGGTaGTCGGACTTAAGCACCTTGAAGCGCTTGCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: YCAASAGLLGAR*SDLSTLKRLRR Trigger: GCGCCGCAAGCGCTTCAAGGTGCTTAAGTCCGACCACCTGGCGCCCAGCAAGCCAGCCGACGCGGCGCAGTA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CCA 72 bp | CTTGGCCTGCTGCTGCAGGTACTGCGCCGCGTCGGCTaGCTTGCTGGGCGCCAGGTGGTCGGACTTAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LGLLLQVLRRVG*LAGRQVVGLKH Trigger: GTGCTTAAGTCCGACCACCTGGCGCCCAGCAAGCCAGCCGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CCA 72 bp | GGCCGAGTCGATCATGCCGGCGGAGCCATACACGTGTaGCCAGCCGGTGCCCAGCGAGCTGCCCATGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: GRVDHAGGAIHV*PAGAQRAAHGS Trigger: ACTACCATGGGCAGCTCGCTGGGCACCGGCTGGCCACACGTGTATGGCTCCGCCGGCATGATCGACTCGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CCA 72 bp | CGCCGTAGGCGCTGTAGTCGCCACTCGCCATGGAGATaGGGGTGGCCGAGTCGATCATGCCGGCGGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RRRRCSRHSPWR*GWPSRSCRRSH Trigger: ATGGCTCCGCCGGCATGATCGACTCGGCCACCCCCATCTCCATGGCGAGTGGCGACTACAGCGCCTACGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CAA 90 bp | CGCAGCTTGGCCTGCTGCTGCAGGTACTGCGCCGCGTCGGCTGGCTaGCTGGGCGCCAGGTGGTCGGACTTAAGCACCTTGAAGCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: RSLACCCRYCAASAG*LGARWSDLSTLKRL Trigger: CAAGCGCTTCAAGGTGCTTAAGTCCGACCACCTGGCGCCCAGCAAGCCAGCCGACGCGGCGCAGTACCTGCAGCAGCAGGCCAAGCTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS GCA 72 bp | CCGGCGGACTGCTCGGATCTTAAAGTTGCTTCAAGTTaGGCGTCCGCATCCGGGAGGACGCCGCTGCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: PADCSDLKVASS*ASASGRTPLRA Trigger: GGCGCGCAGCGGCGTCCTCCCGGATGCGGACGCGCAACTTGAAGCAACTTTAAGATCCGAGCAGTCCGCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CCA 72 bp | GGCCGAGGCATCTTCTTCCTCGCCCTCTTCTTGCTCTaGGTCCGCGCGGGCCGGCGGACTGCTCGGATCTTA | + |
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Preference number: 6 (lower is better) Translates to: GRGIFFLALFLL*VRAGRRTARIL Trigger: TAAGATCCGAGCAGTCCGCCGGCCCGCGCGGACCCAGAGCAAGAAGAGGGCGAGGAAGAAGATGCCTCGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS TCA 72 bp | TGCTTTGGCTGGTGGCTGTTTGCGAGGACGTGGGGCTaGGCGAGGGCGGCGAGTTCGAGAGCAAGGTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: CFGWWLFARTWG*ARAASSRARWG Trigger: TCCCCACCTTGCTCTCGAACTCGCCGCCCTCGCTCAGCCCCACGTCCTCGCAAACAGCCACCAGCCAAAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS GCA 72 bp | TATTCCCGCGCGATGATGTTCTCGATGGCGAAGGGGTaGTTGAAGCCCGAGGGCTGCGCCACGCCGCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: YSRAMMFSMAKG*LKPEGCATPPK Trigger: CTTGGGCGGCGTGGCGCAGCCCTCGGGCTTCAAGCACCCCTTCGCCATCGAGAACATCATCGCGCGGGAATA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS CCA 72 bp | AGGCGCTGTAGTCGCCACTCGCCATGGAGATGGGGGTaGCCGAGTCGATCATGCCGGCGGAGCCATACACGT | + |
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Preference number: 6 (lower is better) Translates to: RRCSRHSPWRWG*PSRSCRRSHTR Trigger: ACGTGTATGGCTCCGCCGGCATGATCGACTCGGCCACCCCCATCTCCATGGCGAGTGGCGACTACAGCGCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396057.6 |
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| CDS GCA 72 bp | TTAAATCCACATTCTCTGCTTAAAGTTGCTTCAAGTTaGGCGTCCGCATCCGGGAGGACGCCGCTGCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LNPHSLLKVASS*ASASGRTPLRA Trigger: GGCGCGCAGCGGCGTCCTCCCGGATGCGGACGCGCAACTTGAAGCAACTTTAAGCAGAGAATGTGGATTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560857.1 |
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| CDS GCA 72 bp | CAGGTCCTGGGGAGGCTGACTGTAGCCAGTTATCTCTaGTTGCAAAGGAAGTGGAAGGTTCCGATGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: QVLGRLTVASYL*LQRKWKVPMGF Trigger: AAAGCCCATCGGAACCTTCCACTTCCTTTGCAAGCAGAGATAACTGGCTACAGTCAGCCTCCCCAGGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560857.1 |
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| CDS GCA 72 bp | CTGAGGCAGAAGGATCATCTGAGTCCGCAGGAGGATTaGTTGAATCCAGGAGTTCGAGTCCAGCCAGCACAA | + |
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Preference number: 6 (lower is better) Translates to: LRQKDHLSPQED*LNPGVRVQPAQ Trigger: TTGTGCTGGCTGGACTCGAACTCCTGGATTCAAGCAATCCTCCTGCGGACTCAGATGATCCTTCTGCCTCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560857.1 |
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| CDS CAA 72 bp | GTCCTGGGGAGGCTGACTGTAGCCAGTTATCTCTGCTaGCAAAGGAAGTGGAAGGTTCCGATGGGCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VLGRLTVASYLC*QRKWKVPMGFL Trigger: CAGAAAGCCCATCGGAACCTTCCACTTCCTTTGCAAGCAGAGATAACTGGCTACAGTCAGCCTCCCCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560857.1 |
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| CDS CAA 90 bp | TGGCATCAGGTCCTGGGGAGGCTGACTGTAGCCAGTTATCTCTGCTaGCAAAGGAAGTGGAAGGTTCCGATGGGCTTTCTGACCCTAAGT | + |
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Preference number: 6 (lower is better) Translates to: WHQVLGRLTVASYLC*QRKWKVPMGFLTLS Trigger: ACTTAGGGTCAGAAAGCCCATCGGAACCTTCCACTTCCTTTGCAAGCAGAGATAACTGGCTACAGTCAGCCTCCCCAGGACCTGATGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560857.1 |
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| CDS CAA 72 bp | CCAGCACAACATGGCAAGAACCATCTCCTTCTGATCTaGCAGTTATCCATTGGCATCAGGTCCTGGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: PAQHGKNHLLLI*QLSIGIRSWGG Trigger: GCCTCCCCAGGACCTGATGCCAATGGATAACTGCAAGATCAGAAGGAGATGGTTCTTGCCATGTTGTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560857.1 |
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| CDS TCA 72 bp | TCCAGCCAGCACAACATGGCAAGAACCATCTCCTTCTaGTCTTGCAGTTATCCATTGGCATCAGGTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SSQHNMARTISF*SCSYPLASGPG Trigger: CCCAGGACCTGATGCCAATGGATAACTGCAAGATCAGAAGGAGATGGTTCTTGCCATGTTGTGCTGGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560857.1 |
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| CDS CCA 72 bp | CAAGAACCATCTCCTTCTGATCTTGCAGTTATCCATTaGCATCAGGTCCTGGGGAGGCTGACTGTAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: QEPSPSDLAVIH*HQVLGRLTVAS Trigger: ACTGGCTACAGTCAGCCTCCCCAGGACCTGATGCCAATGGATAACTGCAAGATCAGAAGGAGATGGTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560857.1 |
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| CDS CCA 72 bp | CTGACTGTAGCCAGTTATCTCTGCTTGCAAAGGAAGTaGAAGGTTCCGATGGGCTTTCTGACCCTAAGTCGA | + |
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Preference number: 6 (lower is better) Translates to: LTVASYLCLQRK*KVPMGFLTLSR Trigger: TCGACTTAGGGTCAGAAAGCCCATCGGAACCTTCCACTTCCTTTGCAAGCAGAGATAACTGGCTACAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560857.1 |
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