RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FNBP1L (Homo sapiens)

Ensembl gene IDs: ENSG00000137942

Ensembl transcript IDs: ENST00000260506.12, ENST00000271234.13, ENST00000370253.6, ENST00000424449.2, ENST00000603526.1

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTaGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGT +
Preference number: 1 (lower is better)
Translates to: SITLDMQQDVKQARR*RRQTLTDGKDLTDS
Trigger: ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
3UTR TCA 90 bp GTTTATTATGCCAGGATTTCAGTGCTGACTAGATTCTTCCCAGACTaGGGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTG +
Preference number: 1 (lower is better)
Translates to: VYYARISVLTRFFPD*GAEDVSRFKEFFQL
Trigger: CAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACCTCAGTCTGGGAAGAATCTAGTCAGCACTGAAATCCTGGCATAATAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
3UTR CAA 90 bp AATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCTTCAACATCTaGCCCATTTCCTCAGAAACCCTCTTCAGGAACCTGCAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: NTLPQKQLHVTSFNI*PISSETLFRNLQSR
Trigger: CCTGGACTGCAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGTTGAAGGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260506.12
3UTR CAA 90 bp ACCACTGACTCAGGGTGTGGTCACACAACCAGCACTGCACAATCCTaGACTGCACAGTGTTTCCAACAACGCTTGCTGAAACTAATTGGA +
Preference number: 2 (lower is better)
Translates to: TTDSGCGHTTSTAQS*TAQCFQQRLLKLIG
Trigger: TCCAATTAGTTTCAGCAAGCGTTGTTGGAAACACTGTGCAGTCAAGGATTGTGCAGTGCTGGTTGTGTGACCACACCCTGAGTCAGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260506.12
3UTR-3UTR GCA 90 bp ACATCTTGCCCATTTCCTCAGAAACCCTCTTCAGGAACCTGCAGTCCAGGAGGAGTGTTCAGTTTAAAGTaGCTGTCCCAAATGTCTCTA +
Preference number: 2 (lower is better)
Translates to: TSCPFPQKPSSGTCSPGGVFSLK*LSQMSL
Trigger: TAGAGACATTTGGGACAGGCACTTTAAACTGAACAC...TCCTCCTGGACTGCAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260506.12
3UTR-3UTR TCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTCAGATGGCAAGGATCTaGCAGATAGTGGGTCTAAAA +
Preference number: 2 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSQMARI*QIVGLK
Trigger: TTTTAGACCCACTATCTGTCAGATCCTTGCCATCTG...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
3UTR-3UTR CCA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGATTCCTATGTCACACATaGCACAAAGGTGCCTGGTTA +
Preference number: 2 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGFLCHT*HKGAWL
Trigger: TAACCAGGCACCTTTGTGCCATGTGTGACATAGGAA...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260506.12
3UTR CCA 72 bp CTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTaGCGCAGGCAGACACTGACAGATGGCAAGGATCTG +
Preference number: 3 (lower is better)
Translates to: LDMQQDVKQARR*RRQTLTDGKDL
Trigger: CAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
3UTR-3UTR CAA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGAGCACTGCACAATCCTaGACTGCACAGTGTTTCCAA +
Preference number: 3 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKSTAQS*TAQCFQ
Trigger: TTGGAAACACTGTGCAGTCAAGGATTGTGCAGTGCT...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260506.12
3UTR TCA 72 bp CTTACTGCTTCTTCACACTTTACTTCCCCACACCACTaGCTCAGGGTGTGGTCACACAACCAGCACTGCACA +
Preference number: 3 (lower is better)
Translates to: LTASSHFTSPHH*LRVWSHNQHCT
Trigger: TGTGCAGTGCTGGTTGTGTGACCACACCCTGAGTCAGTGGTGTGGGGAAGTAAAGTGTGAAGAAGCAGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260506.12
3UTR TCA 72 bp GCCAGGATTTCAGTGCTGACTAGATTCTTCCCAGACTaGGGTGCTGAAGATGTATCACGTTTCAAAGAGTTC +
Preference number: 3 (lower is better)
Translates to: ARISVLTRFFPD*GAEDVSRFKEF
Trigger: GAACTCTTTGAAACGTGATACATCTTCAGCACCTCAGTCTGGGAAGAATCTAGTCAGCACTGAAATCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
3UTR GCA 72 bp AACTGGAATGTTTGCAGTGGGGAAGTTATAGCAGTGTaGACAAATACTAAGATGGAAACATTAGTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: NWNVCSGEVIAV*TNTKMETLVLE
Trigger: CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCCACTGCAAACATTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
3UTR-3UTR CAA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTAAACAAAACAAGGCTTaGACAAGAACAAGGGAATCT +
Preference number: 3 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSKQNKA*TRTRES
Trigger: AGATTCCCTTGTTCTTGTCAAAGCCTTGTTTTGTTT...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTGTCTACCTCGAAAGGTaGCGCCACCGCCGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSVYLER*RHRRAP
Trigger: GGGAGCCCGGCGGTGGCGGCACCTTTCGAGGTAGAC...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS-3UTR GCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCCCACAGCTCCGTaGCCCAGCTCATGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKDPTAP*PSSWRN
Trigger: GTTCCGCCATGAGCTGGGGCACGGAGCTGTGGGATC...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS-3UTR CCA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCCATGGCGGAACTTTCTaGCCGTCTGGCGGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGHGGTF*PSGGAA
Trigger: AGCGGCACCGCCAGACGGCCAGAAAGTTCCGCCATG...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS-3UTR CCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGCCGTGCCCCAGCTCATaGCGGAACTTTCTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKPCPSS*RNFLAV
Trigger: GACGGCCAGAAAGTTCCGCCATGAGCTGGGGCACGG...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS-3UTR CCA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCATGGCGGAACTTTCTaGCCGTCTGGCGGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDHGGTF*PSGGAA
Trigger: AGCGGCACCGCCAGACGGCCAGAAAGTTCCGCCATG...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS-3UTR CCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGACCATGCTGCTGGGGTaGCCCACGGACTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKTMLLG*PTDFLV
Trigger: AACCAGGAAGTCCGTGGGCCACCCCAGCAGCATGGT...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCTCTAAGCTGTCGAACTaGTCCCACAGCTCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGSKLSN*SHSSVP
Trigger: GGGCACGGAGCTGTGGGATCAGTTCGACAGCTTAGA...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTTCTAAGCTGTCGAACTaGTCCCACAGCTCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSSKLSN*SHSSVP
Trigger: GGGCACGGAGCTGTGGGATCAGTTCGACAGCTTAGA...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGACTTCCCCACACCACTaGCTCAGGGTGTGGTCACAC +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKTSPHH*LRVWSH
Trigger: GTGTGACCACACCCTGAGTCAGTGGTGTGGGGAAGT...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR CCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTAAGCAAGCACGGAGGTaGCGCAGGCAGACACTGACA +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSKQARR*RRQTLT
Trigger: TGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTT...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCTCAAACTCATTGTGGTaGCCATGCTGCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGSNSLW*PCCWGG
Trigger: GCCACCCCAGCAGCATGGTCACCACAATGAGTTTGA...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATAAGCAAGCACGGAGGTaGCGCAGGCAGACACTGACA +
Preference number: 4 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDKQARR*RRQTLT
Trigger: TGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTT...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCCTGGCCGTCTGGCGGTaGCGCTGTCCTTCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTLAVWR*RCPSVC
Trigger: ACAGACTGAAGGACAGCGGCACCGCCAGACGGCCAG...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS-3UTR TCA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCTCAAACTCATTGTGGTaGCCATGCTGCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SSITLDMQQDVKQARRWRSNSLW*PCCWGG
Trigger: GCCACCCCAGCAGCATGGTCACCACAATGAGTTTGA...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTGTCTACCTCGAAAGGTaGCGCCACCGCCGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSVYLER*RHRRAP
Trigger: GGGAGCCCGGCGGTGGCGGCACCTTTCGAGGTAGAC...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS-3UTR GCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGTGCGCCATTTCTTCTaGTACAACTTCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKVRHFF*YNFSLS
Trigger: GGACAGCGAGAAGTTGTAGCAGAAGAAATGGCGCAC...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTTCTGCTAATTTAGGCTaGAAACTCCCTGGATCCCCC +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSSANLG*KLPGSP
Trigger: GGGGGATCCAGGGAGTTTGCAGCCTAAATTAGCAGA...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCACCATGCTGCTGGGGTaGCCCACGGACTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTTMLLG*PTDFLV
Trigger: AACCAGGAAGTCCGTGGGCCACCCCAGCAGCATGGT...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCACCATGCTGCTGGGGTaGCCCACGGACTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSTMLLG*PTDFLV
Trigger: AACCAGGAAGTCCGTGGGCCACCCCAGCAGCATGGT...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR TCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGCCCAGACTGAGGTGCTaGAGATGTATCACGTTTCAA +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKPRLRC*RCITFQ
Trigger: TTGAAACGTGATACATCTTCAGCACCTCAGTCTGGG...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTGCCACAATTTGCCCTTaGCCTTTCCTACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSATICP*PFLLWF
Trigger: AAACCACAGTAGGAAAGGCCAAGGGCAAATTGTGGC...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTCTCTTCATCTTTGGATaGACGTTTGGGGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSLFIFG*TFGAVL
Trigger: AAGTACTGCCCCAAACGTTCATCCAAAGATGAAGAG...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCAAACTCATTGTGGTaGCCATGCTGCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTSNSLW*PCCWGG
Trigger: GCCACCCCAGCAGCATGGTCACCACAATGAGTTTGA...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR TCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTAGTTACATCTATGTATaGCGTGGGAACGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSSYIYV*RGNVAF
Trigger: GAAGGCTACGTTCCCACGTCATACATAGATGTAACT...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGAGTTACATCTATGTATaGCGTGGGAACGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKSYIYV*RGNVAF
Trigger: GAAGGCTACGTTCCCACGTCATACATAGATGTAACT...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCTCACCATACACTCTGTaGGCCATTTCTTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGSPYTL*AISSAT
Trigger: TGTAGCAGAAGAAATGGCGCACAGAGTGTATGGTGA...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTTTTTCATCGGCCATATaGGTACGCAGATTCAACTGC +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSFSSAI*VRRFNC
Trigger: GCAGTTGAATCTGCGTACGCATATGGCCGATGAAAA...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGTTTTCATCGGCCATATaGGTACGCAGATTCAACTGC +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKFSSAI*VRRFNC
Trigger: GCAGTTGAATCTGCGTACGCATATGGCCGATGAAAA...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCTTTTCATCGGCCATATaGGTACGCAGATTCAACTGC +
Preference number: 4 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGFSSAI*VRRFNC
Trigger: GCAGTTGAATCTGCGTACGCATATGGCCGATGAAAA...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGACGGACTTCCTGGTTTaGATCATCAGTGTAACTTCC +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKTDFLV*IISVTS
Trigger: GGAAGTTACACTGATGATGCAAACCAGGAAGTCCGT...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTACGTCTCTGTTCTGGTaGCAGATGACTGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSTSLFW*QMTEIF
Trigger: GAAGATTTCAGTCATCTGCCACCAGAACAGAGACGT...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCACGTCTCTGTTCTGGTaGCAGATGACTGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGTSLFW*QMTEIF
Trigger: GAAGATTTCAGTCATCTGCCACCAGAACAGAGACGT...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGACGTCTCTGTTCTGGTaGCAGATGACTGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKTSLFW*QMTEIF
Trigger: GAAGATTTCAGTCATCTGCCACCAGAACAGAGACGT...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTCAAGCCTCATTCTTATaGATTTCCATTCGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSQASFL*ISIRRR
Trigger: CCGCCTACGAATGGAAATCCATAAGAATGAGGCTTG...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGCATCTATGTATGACGTaGGAACGTAGCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKHLCMT*ERSLLH
Trigger: GTGAAGAAGGCTACGTTCCCACGTCATACATAGATG...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGAAGAGTTCTTTCAACTaGGCTGTAGGCTACAGCAGA +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKKSSFN*AVGYSR
Trigger: TCTGCTGTAGCCTACAGCCCAGTTGAAAGAACTCTT...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTGAGTCTACCACCATTTaGGAGTCTCTTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSESTTI*ESLLSS
Trigger: TGATGAAAGAAGAGACTCTCAAATGGTGGTAGACTC...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAGTGCTGGAGATGTTTaGCAAAGTGATTTGCACTAC +
Preference number: 4 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGSAGDV*QSDLHY
Trigger: GTAGTGCAAATCACTTTGTCAAACATCTCCAGCACT...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGCTGGCCGTCTGGCGGTaGCGCTGTCCTTCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: GEVIAVCTNTKMETLVLELAVWR*RCPSVC
Trigger: ACAGACTGAAGGACAGCGGCACCGCCAGACGGCCAG...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS-3UTR GCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTATTCCCCATTGTGTATaGTTGTCTAAGCTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSIPHCV*LSKLSN
Trigger: GTTCGACAGCTTAGACAAGCATACACAATGGGGAAT...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATTCACCATACACTCTGTaGGCCATTTCTTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDSPYTL*AISSAT
Trigger: TGTAGCAGAAGAAATGGCGCACAGAGTGTATGGTGA...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCCTCTCCCACCTGTTTTaGCTTCGACTTCAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSLSHLF*LRLQRA
Trigger: GGCTCTCTGAAGTCGAAGGCAAAACAGGTGGGAGAG...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR GCA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCGCGGAAATAACAAAATaGCCTAAAGGCGGTACACAT +
Preference number: 4 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGAEITK*PKGGTH
Trigger: ATGTGTACCGCCTTTAGGGCATTTTGTTATTTCCGC...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR TCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTTCTAAGCTGTCGAACTaGTCCCACAGCTCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSSKLSN*SHSSVP
Trigger: GGGCACGGAGCTGTGGGATCAGTTCGACAGCTTAGA...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGAATAACTTTGCGTTCTaGGTCAGCAAATCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKNNFAF*VSKSSV
Trigger: TACAGAGGATTTGCTGACTCAGAACGCAAAGTTATT...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATGAGTCTACCACCATTTaGGAGTCTCTTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDESTTI*ESLLSS
Trigger: TGATGAAAGAAGAGACTCTCAAATGGTGGTAGACTC...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGTTCAAAACCAGATTTaGAGGAGTCTACCACCATTT +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKVQNQI*RSLPPF
Trigger: AAATGGTGGTAGACTCCTTCAAATCTGGTTTTGAAC...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTCCCTGTGTTACAAGATaGTTTATGTCACTGCTATGT +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSPCVTR*FMSLLC
Trigger: ACATAGCAGTGACATAAATCATCTTGTAACACAGGG...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCCAGATGGCAAGGATCTaGCAGATAGTGGGTCTAAAA +
Preference number: 4 (lower is better)
Translates to: SSITLDMQQDVKQARRWRQMARI*QIVGLK
Trigger: TTTTAGACCCACTATCTGTCAGATCCTTGCCATCTG...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp ACATCTTGCCCATTTCCTCAGAAACCCTCTTCAGGAACCTGCAGTCCAGGAGGACCCAGACTGAGGTGCTaGAGATGTATCACGTTTCAA +
Preference number: 4 (lower is better)
Translates to: TSCPFPQKPSSGTCSPGGPRLRC*RCITFQ
Trigger: TTGAAACGTGATACATCTTCAGCACCTCAGTCTGGG...TCCTCCTGGACTGCAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR TCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTTTGAATGGAAGCAGCTaGCTTTTGACAATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSLNGSS*LLTIVL
Trigger: AAGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAA...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGTTGAATGGAAGCAGCTaGCTTTTGACAATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKLNGSS*LLTIVL
Trigger: AAGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAA...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCGTGCGCCATTTCTTCTaGTACAACTTCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTVRHFF*YNFSLS
Trigger: GGACAGCGAGAAGTTGTAGCAGAAGAAATGGCGCAC...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATGTACGCAGATTCAACTaGTGTTTGGCCTTTTCAACA +
Preference number: 4 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDVRRFN*CLAFST
Trigger: TGTTGAAAAGGCCAAACAGCAGTTGAATCTGCGTAC...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCACTCTCCTGTTTGGATaGACTGATAGTCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: SSITLDMQQDVKQARRWRTLLFG*TDSPIR
Trigger: TCTGATGGGACTATCAGTGCATCCAAACAGGAGAGT...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCTCTGCTAATTTAGGCTaGAAACTCCCTGGATCCCCC +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSSANLG*KLPGSP
Trigger: GGGGGATCCAGGGAGTTTGCAGCCTAAATTAGCAGA...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR GCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTCACATGGCACAAAGGTaGCTGGTTAGTTTAGATATA +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSHMAQR*LVSLDI
Trigger: TATATCTAAACTAACCAGGCACCTTTGTGCCATGTG...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR GCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTGTGTTCAGTTTAAAGTaGCTGTCCCAAATGTCTCTA +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSVFSLK*LSQMSL
Trigger: TAGAGACATTTGGGACAGGCACTTTAAACTGAACAC...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR CCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTAACTTTCTGGCCGTCTaGCGGTGCCGCTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSNFLAV*RCRCPS
Trigger: TGAAGGACAGCGGCACCGCCAGACGGCCAGAAAGTT...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS-3UTR CCA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATGATTCAACTGCTGTTTaGCCTTTTCAACATCTGCCT +
Preference number: 4 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDDSTAV*PFQHLP
Trigger: AGGCAGATGTTGAAAAGGCCAAACAGCAGTTGAATC...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTAAGCAAGCACGGAGGTaGCGCAGGCAGACACTGACA +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSKQARR*RRQTLT
Trigger: TGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTT...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCTGGGGACTGTGGCTTTaGCTTCTTTCCAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSWGLWL*LLSKEP
Trigger: TGGCTCTTTGGAAAGAAGCCAAAGCCACAGTCCCCA...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271234.13
ENST00000424449.2
CDS-3UTR CCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTGGGGACTGTGGCTTTaGCTTCTTTCCAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTWGLWL*LLSKEP
Trigger: TGGCTCTTTGGAAAGAAGCCAAAGCCACAGTCCCCA...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271234.13
ENST00000424449.2
3UTR CAA 72 bp TCAGGGTGTGGTCACACAACCAGCACTGCACAATCCTaGACTGCACAGTGTTTCCAACAACGCTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SGCGHTTSTAQS*TAQCFQQRLLK
Trigger: TTTCAGCAAGCGTTGTTGGAAACACTGTGCAGTCAAGGATTGTGCAGTGCTGGTTGTGTGACCACACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260506.12
3UTR CAA 72 bp CCCCAAAAGCAGCTGCATGTAACCTCCTTCAACATCTaGCCCATTTCCTCAGAAACCCTCTTCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PQKQLHVTSFNI*PISSETLFRNL
Trigger: CAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGTTGAAGGAGGTTACATGCAGCTGCTTTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR TCA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCCATCTTTCATTTTGTTaGGTGCATCTTTTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGHLSFC*VHLFGL
Trigger: CAGACCAAAAAGATGCACTCAACAAAATGAAAGATG...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTTCAAACTCATTGTGGTaGCCATGCTGCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSSNSLW*PCCWGG
Trigger: GCCACCCCAGCAGCATGGTCACCACAATGAGTTTGA...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCGTACGCAGATTCAACTaGTGTTTGGCCTTTTCAACA +
Preference number: 4 (lower is better)
Translates to: SSITLDMQQDVKQARRWRVRRFN*CLAFST
Trigger: TGTTGAAAAGGCCAAACAGCAGTTGAATCTGCGTAC...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp ACATCTTGCCCATTTCCTCAGAAACCCTCTTCAGGAACCTGCAGTCCAGGAGGAACTCTCCTGTTTGGATaGACTGATAGTCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: TSCPFPQKPSSGTCSPGGTLLFG*TDSPIR
Trigger: TCTGATGGGACTATCAGTGCATCCAAACAGGAGAGT...TCCTCCTGGACTGCAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR CCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCGTGGCTCTTCATCTTTaGATGAACGTTTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSVALHL*MNVWGS
Trigger: ACTGCCCCAAACGTTCATCCAAAGATGAAGAGCCAC...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCGTGGCTCTTCATCTTTaGATGAACGTTTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTVALHL*MNVWGS
Trigger: ACTGCCCCAAACGTTCATCCAAAGATGAAGAGCCAC...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCGCCACAATTTGCCCTTaGCCTTTCCTACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSATICP*PFLLWF
Trigger: AAACCACAGTAGGAAAGGCCAAGGGCAAATTGTGGC...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CCA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCTTTACGTCTCTGTTCTaGTGGCAGATGACTGAAATC +
Preference number: 4 (lower is better)
Translates to: SSITLDMQQDVKQARRWRFTSLF*WQMTEI
Trigger: GATTTCAGTCATCTGCCACCAGAACAGAGACGTAAA...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATTGGATCCCCCATTTGTaGATTCTTCTCATATACATC +
Preference number: 4 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDWIPHL*ILLIYI
Trigger: GATGTATATGAGAAGAATCCACAAATGGGGGATCCA...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCTGTTCTGGTGGCAGATaGCTGAAATCTTCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSCSGGR*LKSSSA
Trigger: AGCACTAGAAGATTTCAGTCATCTGCCACCAGAACA...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR TCA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCCCCTGTGTTACAAGATaGTTTATGTCACTGCTATGT +
Preference number: 4 (lower is better)
Translates to: SSITLDMQQDVKQARRWRPCVTR*FMSLLC
Trigger: ACATAGCAGTGACATAAATCATCTTGTAACACAGGG...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCAGTTACATCTATGTATaGCGTGGGAACGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSSYIYV*RGNVAF
Trigger: GAAGGCTACGTTCCCACGTCATACATAGATGTAACT...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR TCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCCAGATGGCAAGGATCTaGCAGATAGTGGGTCTAAAA +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTQMARI*QIVGLK
Trigger: TTTTAGACCCACTATCTGTCAGATCCTTGCCATCTG...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTTTTCATCGGCCATATaGGTACGCAGATTCAACTGC +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTFSSAI*VRRFNC
Trigger: GCAGTTGAATCTGCGTACGCATATGGCCGATGAAAA...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR GCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCACTCTCCTGTTTGGATaGACTGATAGTCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTTLLFG*TDSPIR
Trigger: TCTGATGGGACTATCAGTGCATCCAAACAGGAGAGT...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR GCA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTACTCTCCCACCTGTTTTaGCTTCGACTTCAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLLSHLF*LRLQRA
Trigger: GGCTCTCTGAAGTCGAAGGCAAAACAGGTGGGAGAG...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTCTCTCCCACCTGTTTTaGCTTCGACTTCAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSLSHLF*LRLQRA
Trigger: GGCTCTCTGAAGTCGAAGGCAAAACAGGTGGGAGAG...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCACGGACTTCCTGGTTTaGATCATCAGTGTAACTTCC +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTTDFLV*IISVTS
Trigger: GGAAGTTACACTGATGATGCAAACCAGGAAGTCCGT...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR GCA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCGAAGTTATAGCAGTGTaGACAAATACTAAGATGGAA +
Preference number: 4 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGEVIAV*TNTKME
Trigger: TTCCATCTTAGTATTTGTGCACACTGCTATAACTTC...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCTTCCTACTGTGGTTTTaGCATCCATCTTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSFLLWF*HPSSHS
Trigger: AGAGTGGGAAGATGGATGCCAAAACCACAGTAGGAA...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCACGTCTCTGTTCTGGTaGCAGATGACTGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSTSLFW*QMTEIF
Trigger: GAAGATTTCAGTCATCTGCCACCAGAACAGAGACGT...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTTTGAGTGCATCTTTTTaGTCTGATTCTTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSLSASF*SDSFCS
Trigger: ACTACAGAAAGAATCAGACCAAAAAGATGCACTCAA...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCTGGATCCCCCATTTGTaGATTCTTCTCATATACATC +
Preference number: 4 (lower is better)
Translates to: SSITLDMQQDVKQARRWRWIPHL*ILLIYI
Trigger: GATGTATATGAGAAGAATCCACAAATGGGGGATCCA...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCCAAGCCTCATTCTTATaGATTTCCATTCGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSQASFL*ISIRRR
Trigger: CCGCCTACGAATGGAAATCCATAAGAATGAGGCTTG...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCCATCTATGTATGACGTaGGAACGTAGCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSHLCMT*ERSLLH
Trigger: GTGAAGAAGGCTACGTTCCCACGTCATACATAGATG...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTTCCTATGTCACACATaGCACAAAGGTGCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTFLCHT*HKGAWL
Trigger: TAACCAGGCACCTTTGTGCCATGTGTGACATAGGAA...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR CCA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTATGGTACACTATTGTTaGCTTTTTCTTTTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSMVHYC*LFLLWE
Trigger: TTCCCACAAAAGAAAAAGCCAACAATAGTGTACCAT...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCAAGAGTTCTTTCAACTaGGCTGTAGGCTACAGCAGA +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTKSSFN*AVGYSR
Trigger: TCTGCTGTAGCCTACAGCCCAGTTGAAAGAACTCTT...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCGAGAATGTGAGAAACTaGGACCCATTAGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSENVRN*DPLGVL
Trigger: CAGTACTCCTAATGGGTCCCAGTTTCTCACATTCTC...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271234.13
ENST00000424449.2
CDS-3UTR TCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCGAGTCTACCACCATTTaGGAGTCTCTTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTESTTI*ESLLSS
Trigger: TGATGAAAGAAGAGACTCTCAAATGGTGGTAGACTC...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR TCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCAGTGCTGGAGATGTTTaGCAAAGTGATTTGCACTAC +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSSAGDV*QSDLHY
Trigger: GTAGTGCAAATCACTTTGTCAAACATCTCCAGCACT...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp ACATCTTGCCCATTTCCTCAGAAACCCTCTTCAGGAACCTGCAGTCCAGGAGGAAATAGTCCTTTGTCTTaGGGTGGTGAATATCTTCTG +
Preference number: 4 (lower is better)
Translates to: TSCPFPQKPSSGTCSPGGNSPLS*GGEYLL
Trigger: CAGAAGATATTCACCACCTCAAGACAAAGGACTATT...TCCTCCTGGACTGCAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR GCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCATTCCCCATTGTGTATaGTTGTCTAAGCTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSIPHCV*LSKLSN
Trigger: GTTCGACAGCTTAGACAAGCATACACAATGGGGAAT...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTAGTGCGCCATTTCTTCTaGTACAACTTCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLVRHFF*YNFSLS
Trigger: GGACAGCGAGAAGTTGTAGCAGAAGAAATGGCGCAC...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCGTACGCAGATTCAACTaGTGTTTGGCCTTTTCAACA +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSVRRFN*CLAFST
Trigger: TGTTGAAAAGGCCAAACAGCAGTTGAATCTGCGTAC...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR GCA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTATCTGCTAATTTAGGCTaGAAACTCCCTGGATCCCCC +
Preference number: 4 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLSANLG*KLPGSP
Trigger: GGGGGATCCAGGGAGTTTGCAGCCTAAATTAGCAGA...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTTCTGCTAATTTAGGCTaGAAACTCCCTGGATCCCCC +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSSANLG*KLPGSP
Trigger: GGGGGATCCAGGGAGTTTGCAGCCTAAATTAGCAGA...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGCTCTCCCACCTGTTTTaGCTTCGACTTCAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GEVIAVCTNTKMETLVLELSHLF*LRLQRA
Trigger: GGCTCTCTGAAGTCGAAGGCAAAACAGGTGGGAGAG...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCGGGAATCTAAAGACATaGCTGAAAAATCTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SSITLDMQQDVKQARRWRGNLKT*LKNLAQ
Trigger: TTGAGCTAGATTTTTCAGGCATGTCTTTAGATTCCC...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATGAAGTTATAGCAGTGTaGACAAATACTAAGATGGAA +
Preference number: 4 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDEVIAV*TNTKME
Trigger: TTCCATCTTAGTATTTGTGCACACTGCTATAACTTC...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCGATTCAACTGCTGTTTaGCCTTTTCAACATCTGCCT +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTDSTAV*PFQHLP
Trigger: AGGCAGATGTTGAAAAGGCCAAACAGCAGTTGAATC...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTTTACGTCTCTGTTCTaGTGGCAGATGACTGAAATC +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTFTSLF*WQMTEI
Trigger: GATTTCAGTCATCTGCCACCAGAACAGAGACGTAAA...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR TCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCAATAACTTTGCGTTCTaGGTCAGCAAATCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSNNFAF*VSKSSV
Trigger: TACAGAGGATTTGCTGACTCAGAACGCAAAGTTATT...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR TCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCGTTCAAAACCAGATTTaGAGGAGTCTACCACCATTT +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSVQNQI*RSLPPF
Trigger: AAATGGTGGTAGACTCCTTCAAATCTGGTTTTGAAC...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR TCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCCCCTGTGTTACAAGATaGTTTATGTCACTGCTATGT +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSPCVTR*FMSLLC
Trigger: ACATAGCAGTGACATAAATCATCTTGTAACACAGGG...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR TCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTTGAATGGAAGCAGCTaGCTTTTGACAATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTLNGSS*LLTIVL
Trigger: AAGGACTATTGTCAAAAGTCAGCTGCTTCCATTCAA...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCAAAATCATGTCTGCATaGACTCATGCAACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSKIMSA*THATCF
Trigger: GAAGCAAGTTGCATGAGTGCATGCAGACATGATTTT...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTGGATCCCCCATTTGTaGATTCTTCTCATATACATC +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTWIPHL*ILLIYI
Trigger: GATGTATATGAGAAGAATCCACAAATGGGGGATCCA...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCTGGATCCCCCATTTGTaGATTCTTCTCATATACATC +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSWIPHL*ILLIYI
Trigger: GATGTATATGAGAAGAATCCACAAATGGGGGATCCA...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CCA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGAACCATGCTGCTGGGGTaGCCCACGGACTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGTMLLG*PTDFLV
Trigger: AACCAGGAAGTCCGTGGGCCACCCCAGCAGCATGGT...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTATGTTCTGGTGGCAGATaGCTGAAATCTTCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLCSGGR*LKSSSA
Trigger: AGCACTAGAAGATTTCAGTCATCTGCCACCAGAACA...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCCATCTTTCATTTTGTTaGGTGCATCTTTTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSHLSFC*VHLFGL
Trigger: CAGACCAAAAAGATGCACTCAACAAAATGAAAGATG...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR TCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTAGTTACATCTATGTATaGCGTGGGAACGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSSYIYV*RGNVAF
Trigger: GAAGGCTACGTTCCCACGTCATACATAGATGTAACT...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGCCCAGACTGAGGTGCTaGAGATGTATCACGTTTCAA +
Preference number: 4 (lower is better)
Translates to: GEVIAVCTNTKMETLVLEPRLRC*RCITFQ
Trigger: TTGAAACGTGATACATCTTCAGCACCTCAGTCTGGG...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTATCACCATACACTCTGTaGGCCATTTCTTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLSPYTL*AISSAT
Trigger: TGTAGCAGAAGAAATGGCGCACAGAGTGTATGGTGA...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCGGGAATCTAAAGACATaGCTGAAAAATCTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTGNLKT*LKNLAQ
Trigger: TTGAGCTAGATTTTTCAGGCATGTCTTTAGATTCCC...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp ACATCTTGCCCATTTCCTCAGAAACCCTCTTCAGGAACCTGCAGTCCAGGAGGAGAAGTTATAGCAGTGTaGACAAATACTAAGATGGAA +
Preference number: 4 (lower is better)
Translates to: TSCPFPQKPSSGTCSPGGEVIAV*TNTKME
Trigger: TTCCATCTTAGTATTTGTGCACACTGCTATAACTTC...TCCTCCTGGACTGCAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR CCA 90 bp TTCCCCTCCATTCAAGGTTTCCTCTATCTTCAAATGTGTATTTTTCTATGTAACAACTTTCTGGCCGTCTaGCGGTGCCGCTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FPSIQGFLYLQMCIFLCNNFLAV*RCRCPS
Trigger: TGAAGGACAGCGGCACCGCCAGACGGCCAGAAAGTT...GTTACATAGAAAAATACACATTTGAAGATAGAGGAAACCTTGAATGGAGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR CCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTTTCCTACTGTGGTTTTaGCATCCATCTTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSFLLWF*HPSSHS
Trigger: AGAGTGGGAAGATGGATGCCAAAACCACAGTAGGAA...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTATTCCTACTGTGGTTTTaGCATCCATCTTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLFLLWF*HPSSHS
Trigger: AGAGTGGGAAGATGGATGCCAAAACCACAGTAGGAA...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTACAAGCCTCATTCTTATaGATTTCCATTCGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLQASFL*ISIRRR
Trigger: CCGCCTACGAATGGAAATCCATAAGAATGAGGCTTG...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTCATCTATGTATGACGTaGGAACGTAGCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSHLCMT*ERSLLH
Trigger: GTGAAGAAGGCTACGTTCCCACGTCATACATAGATG...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp ACATCTTGCCCATTTCCTCAGAAACCCTCTTCAGGAACCTGCAGTCCAGGAGGAATGGTACACTATTGTTaGCTTTTTCTTTTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: TSCPFPQKPSSGTCSPGGMVHYC*LFLLWE
Trigger: TTCCCACAAAAGAAAAAGCCAACAATAGTGTACCAT...TCCTCCTGGACTGCAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR CCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTGAGAATGTGAGAAACTaGGACCCATTAGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSENVRN*DPLGVL
Trigger: CAGTACTCCTAATGGGTCCCAGTTTCTCACATTCTC...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271234.13
CDS-3UTR TCA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGCAGATGGCAAGGATCTaGCAGATAGTGGGTCTAAAA +
Preference number: 4 (lower is better)
Translates to: GEVIAVCTNTKMETLVLEQMARI*QIVGLK
Trigger: TTTTAGACCCACTATCTGTCAGATCCTTGCCATCTG...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTAAGTGCTGGAGATGTTTaGCAAAGTGATTTGCACTAC +
Preference number: 4 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLSAGDV*QSDLHY
Trigger: GTAGTGCAAATCACTTTGTCAAACATCTCCAGCACT...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTGATTCAACTGCTGTTTaGCCTTTTCAACATCTGCCT +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSDSTAV*PFQHLP
Trigger: AGGCAGATGTTGAAAAGGCCAAACAGCAGTTGAATC...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTATTTACGTCTCTGTTCTaGTGGCAGATGACTGAAATC +
Preference number: 4 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLFTSLF*WQMTEI
Trigger: GATTTCAGTCATCTGCCACCAGAACAGAGACGTAAA...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTTGAGTGCATCTTTTTaGTCTGATTCTTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTLSASF*SDSFCS
Trigger: ACTACAGAAAGAATCAGACCAAAAAGATGCACTCAA...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CCA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGCATCTATGTATGACGTaGGAACGTAGCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GEVIAVCTNTKMETLVLEHLCMT*ERSLLH
Trigger: GTGAAGAAGGCTACGTTCCCACGTCATACATAGATG...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
3UTR CAA 72 bp CACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTaGCAGTGGGGAAGTTATAGCAGTGTGCACAAATAC +
Preference number: 4 (lower is better)
Translates to: HSYFFVMPKLEC*QWGSYSSVHKY
Trigger: GTATTTGTGCACACTGCTATAACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTAATAACTTTGCGTTCTaGGTCAGCAAATCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSNNFAF*VSKSSV
Trigger: TACAGAGGATTTGCTGACTCAGAACGCAAAGTTATT...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTAATAGTCCTTTGTCTTaGGGTGGTGAATATCTTCTG +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSNSPLS*GGEYLL
Trigger: CAGAAGATATTCACCACCTCAAGACAAAGGACTATT...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTAAAAATCATGTCTGCATaGACTCATGCAACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLKIMSA*THATCF
Trigger: GAAGCAAGTTGCATGAGTGCATGCAGACATGATTTT...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGGATTCAACTGCTGTTTaGCCTTTTCAACATCTGCCT +
Preference number: 4 (lower is better)
Translates to: GEVIAVCTNTKMETLVLEDSTAV*PFQHLP
Trigger: AGGCAGATGTTGAAAAGGCCAAACAGCAGTTGAATC...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGGTTCAAAACCAGATTTaGAGGAGTCTACCACCATTT +
Preference number: 4 (lower is better)
Translates to: GEVIAVCTNTKMETLVLEVQNQI*RSLPPF
Trigger: AAATGGTGGTAGACTCCTTCAAATCTGGTTTTGAAC...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTACATCTTTCATTTTGTTaGGTGCATCTTTTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLHLSFC*VHLFGL
Trigger: CAGACCAAAAAGATGCACTCAACAAAATGAAAGATG...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGCCCTGTGTTACAAGATaGTTTATGTCACTGCTATGT +
Preference number: 4 (lower is better)
Translates to: GEVIAVCTNTKMETLVLEPCVTR*FMSLLC
Trigger: ACATAGCAGTGACATAAATCATCTTGTAACACAGGG...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGAGCACTGCACAATCCTTaGCTGCACAGTGTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGALHNP*LHSVSN
Trigger: GTTGGAAACACTGTGCAGTCAAGGATTGTGCAGTGC...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR TCA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGCATCTTTCATTTTGTTaGGTGCATCTTTTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GEVIAVCTNTKMETLVLEHLSFC*VHLFGL
Trigger: CAGACCAAAAAGATGCACTCAACAAAATGAAAGATG...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTTTGAGTGCATCTTTTTaGTCTGATTCTTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSLSASF*SDSFCS
Trigger: ACTACAGAAAGAATCAGACCAAAAAGATGCACTCAA...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTATGGTACACTATTGTTaGCTTTTTCTTTTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSMVHYC*LFLLWE
Trigger: TTCCCACAAAAGAAAAAGCCAACAATAGTGTACCAT...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGACTCTTCATCTTTGGATaGACGTTTGGGGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGLFIFG*TFGAVL
Trigger: AAGTACTGCCCCAAACGTTCATCCAAAGATGAAGAG...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGATGTTCTGGTGGCAGATaGCTGAAATCTTCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGCSGGR*LKSSSA
Trigger: AGCACTAGAAGATTTCAGTCATCTGCCACCAGAACA...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp TTCCCCTCCATTCAAGGTTTCCTCTATCTTCAAATGTGTATTTTTCTATGTAACACGGACTTCCTGGTTTaGATCATCAGTGTAACTTCC +
Preference number: 4 (lower is better)
Translates to: FPSIQGFLYLQMCIFLCNTDFLV*IISVTS
Trigger: GGAAGTTACACTGATGATGCAAACCAGGAAGTCCGT...GTTACATAGAAAAATACACATTTGAAGATAGAGGAAACCTTGAATGGAGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR CCA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGAAAGAGTTCTTTCAACTaGGCTGTAGGCTACAGCAGA +
Preference number: 4 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGKSSFN*AVGYSR
Trigger: TCTGCTGTAGCCTACAGCCCAGTTGAAAGAACTCTT...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGAATTCCCCATTGTGTATaGTTGTCTAAGCTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGIPHCV*LSKLSN
Trigger: GTTCGACAGCTTAGACAAGCATACACAATGGGGAAT...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CCA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGATTTACGTCTCTGTTCTaGTGGCAGATGACTGAAATC +
Preference number: 4 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGFTSLF*WQMTEI
Trigger: GATTTCAGTCATCTGCCACCAGAACAGAGACGTAAA...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR TCA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGAAATAACTTTGCGTTCTaGGTCAGCAAATCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGNNFAF*VSKSSV
Trigger: TACAGAGGATTTGCTGACTCAGAACGCAAAGTTATT...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR GCA 90 bp TTCCCCTCCATTCAAGGTTTCCTCTATCTTCAAATGTGTATTTTTCTATGTAACGGGAATCTAAAGACATaGCTGAAAAATCTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: FPSIQGFLYLQMCIFLCNGNLKT*LKNLAQ
Trigger: TTGAGCTAGATTTTTCAGGCATGTCTTTAGATTCCC...GTTACATAGAAAAATACACATTTGAAGATAGAGGAAACCTTGAATGGAGGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS GCA 90 bp GCTCCGTGCCCCAGCTCATGGCGGAACTTTCTGGCCGTCTGGCGGTaGCGCTGTCCTTCAGTCTGTCGGCTCCACAGTCTGTCCGACCTC +
Preference number: 5 (lower is better)
Translates to: APCPSSWRNFLAVWR*RCPSVCRLHSLSDL
Trigger: GAGGTCGGACAGACTGTGGAGCCGACAGACTGAAGGACAGCGGCACCGCCAGACGGCCAGAAAGTTCCGCCATGAGCTGGGGCACGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS CCA 90 bp TGTCTAAGCTGTCGAACTGATCCCACAGCTCCGTGCCCCAGCTCATaGCGGAACTTTCTGGCCGTCTGGCGGTGCCGCTGTCCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: CLSCRTDPTAPCPSS*RNFLAVWRCRCPSV
Trigger: GACTGAAGGACAGCGGCACCGCCAGACGGCCAGAAAGTTCCGCCATGAGCTGGGGCACGGAGCTGTGGGATCAGTTCGACAGCTTAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS-3UTR CAA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGCCTCTCCCACCTGTTTaGCCTTCGACTTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKPLPPV*PSTSES
Trigger: GCTCTCTGAAGTCGAAGGCAAAACAGGTGGGAGAGG...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCCCTCTCCCACCTGTTTaGCCTTCGACTTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGPLPPV*PSTSES
Trigger: GCTCTCTGAAGTCGAAGGCAAAACAGGTGGGAGAGG...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTCGTGGCTCTTCATCTTaGGATGAACGTTTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSRGSSS*DERLGQ
Trigger: CTGCCCCAAACGTTCATCCAAAGATGAAGAGCCACG...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS GCA 90 bp ATTGTGGTGACCATGCTGCTGGGGTGGCCCACGGACTTCCTGGTTTaGATCATCAGTGTAACTTCCCTCAGGACTTTCTCGTCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: IVVTMLLGWPTDFLV*IISVTSLRTFSSLC
Trigger: ACACAGGGACGAGAAAGTCCTGAGGGAAGTTACACTGATGATGCAAACCAGGAAGTCCGTGGGCCACCCCAGCAGCATGGTCACCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCCCAAAGAGCCACAATTaGCCCTTGGCCTTTCCTACT +
Preference number: 5 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGPKSHN*PLAFPT
Trigger: AGTAGGAAAGGCCAAGGGCAAATTGTGGCTCTTTGG...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCGTGGGGACTGTGGCTTaGGCTTCTTTCCAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SSITLDMQQDVKQARRWRVGTVA*ASFQRA
Trigger: GGCTCTTTGGAAAGAAGCCAAAGCCACAGTCCCCAC...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271234.13
CDS-3UTR CAA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCCAAAGAGCCACAATTaGCCCTTGGCCTTTCCTACT +
Preference number: 5 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDPKSHN*PLAFPT
Trigger: AGTAGGAAAGGCCAAGGGCAAATTGTGGCTCTTTGG...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGCCCTGGATCCCCCATTaGTGGATTCTTCTCATATAC +
Preference number: 5 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKPWIPH*WILLIY
Trigger: GTATATGAGAAGAATCCACAAATGGGGGATCCAGGG...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCTCTGTCTCCGAGCTCTaGTCCATCCGTCACCTTTGT +
Preference number: 5 (lower is better)
Translates to: SSITLDMQQDVKQARRWRSVSEL*SIRHLC
Trigger: ACAAAGGTGACGGATGGACAAGAGCTCGGAGACAGA...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCTTCCCACTCTCCTGTTaGGATGCACTGATAGTCCCA +
Preference number: 5 (lower is better)
Translates to: SSITLDMQQDVKQARRWRFPLSC*DALIVP
Trigger: TGGGACTATCAGTGCATCCAAACAGGAGAGTGGGAA...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGCCACAATTTGCCCTaGGCCTTTCCTACTGTGGTT +
Preference number: 5 (lower is better)
Translates to: SSITLDMQQDVKQARRWRSHNLP*AFPTVV
Trigger: AACCACAGTAGGAAAGGCCAAGGGCAAATTGTGGCT...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCCTAGTGCTGGGCCCTTaGGCTTCTTTCCAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTLVLGP*ASFQRA
Trigger: GGCTCTTTGGAAAGAAGCCAAAGGGCCCAGCACTAG...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000370253.6
CDS-3UTR CAA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCCCTGGATCCCCCATTaGTGGATTCTTCTCATATAC +
Preference number: 5 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDPWIPH*WILLIY
Trigger: GTATATGAGAAGAATCCACAAATGGGGGATCCAGGG...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCCCTCTCCCACCTGTTTaGCCTTCGACTTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSPLPPV*PSTSES
Trigger: GCTCTCTGAAGTCGAAGGCAAAACAGGTGGGAGAGG...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCCCTCTCCCACCTGTTTaGCCTTCGACTTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTPLPPV*PSTSES
Trigger: GCTCTCTGAAGTCGAAGGCAAAACAGGTGGGAGAGG...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTCCAAAACTGGAATGTTaGCAGTGGGGAAGTTATAGC +
Preference number: 5 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSPKLEC*QWGSYS
Trigger: GCTATAACTTCCCCACTGCAAACATTCCAGTTTTGG...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCGTGGGGACTGTGGCTTaGGCTTCTTTCCAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTVGTVA*ASFQRA
Trigger: GGCTCTTTGGAAAGAAGCCAAAGCCACAGTCCCCAC...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271234.13
ENST00000424449.2
CDS-3UTR CAA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGTCTTTCATAACTCTGTaGTGCCTTTTCTGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKSFITL*CLFCLS
Trigger: AGAGAGGCAGAAAAGGCACAACAGAGTTATGAAAGA...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATAGATTCAACTGCTGTTaGGCCTTTTCAACATCTGCC +
Preference number: 5 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDRFNCC*AFSTSA
Trigger: GGCAGATGTTGAAAAGGCCAAACAGCAGTTGAATCT...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGGTTCAAAACCAGATTaGAAGGAGTCTACCACCATT +
Preference number: 5 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKGSKPD*KESTTI
Trigger: AATGGTGGTAGACTCCTTCAAATCTGGTTTTGAACC...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCTTTCCTACTGTGGTTTaGGCATCCATCTTCCCACTC +
Preference number: 5 (lower is better)
Translates to: SSITLDMQQDVKQARRWRFPTVV*ASIFPL
Trigger: GAGTGGGAAGATGGATGCCAAAACCACAGTAGGAAA...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCTGTCTCCGAGCTCTaGTCCATCCGTCACCTTTGT +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTSVSEL*SIRHLC
Trigger: ACAAAGGTGACGGATGGACAAGAGCTCGGAGACAGA...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS CCA 90 bp CTCAAATTCATCATCAAACTCATTGTGGTGACCATGCTGCTGGGGTaGCCCACGGACTTCCTGGTTTGCATCATCAGTGTAACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: LKFIIKLIVVTMLLG*PTDFLVCIISVTSL
Trigger: GAGGGAAGTTACACTGATGATGCAAACCAGGAAGTCCGTGGGCCACCCCAGCAGCATGGTCACCACAATGAGTTTGATGATGAATTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATGCACATGTCAAGATATaGTTGAGCTTTTCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDAHVKI*LSFSSF
Trigger: GAAGGACGAAAAGCTCAACAATATCTTGACATGTGC...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATTCTTTCATAACTCTGTaGTGCCTTTTCTGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDSFITL*CLFCLS
Trigger: AGAGAGGCAGAAAAGGCACAACAGAGTTATGAAAGA...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGATTCAACTGCTGTTaGGCCTTTTCAACATCTGCC +
Preference number: 5 (lower is better)
Translates to: SSITLDMQQDVKQARRWRRFNCC*AFSTSA
Trigger: GGCAGATGTTGAAAAGGCCAAACAGCAGTTGAATCT...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCATGATGGGAATAACTTaGCGTTCTGAGTCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGMMGIT*RSESAN
Trigger: ATTTGCTGACTCAGAACGCAAAGTTATTCCCATCAT...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCGGAGTCTACCACCATTaGAGAGTCTCTTCTTTCATC +
Preference number: 5 (lower is better)
Translates to: SSITLDMQQDVKQARRWRGVYHH*RVSSFI
Trigger: GATGAAAGAAGAGACTCTCAAATGGTGGTAGACTCC...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCTTCCCACTCTCCTGTTaGGATGCACTGATAGTCCCA +
Preference number: 5 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSFPLSC*DALIVP
Trigger: TGGGACTATCAGTGCATCCAAACAGGAGAGTGGGAA...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCAGCCACAATTTGCCCTaGGCCTTTCCTACTGTGGTT +
Preference number: 5 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSSHNLP*AFPTVV
Trigger: AACCACAGTAGGAAAGGCCAAGGGCAAATTGTGGCT...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCAGCCACAATTTGCCCTaGGCCTTTCCTACTGTGGTT +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTSHNLP*AFPTVV
Trigger: AACCACAGTAGGAAAGGCCAAGGGCAAATTGTGGCT...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCCCAAAGAGCCACAATTaGCCCTTGGCCTTTCCTACT +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTPKSHN*PLAFPT
Trigger: AGTAGGAAAGGCCAAGGGCAAATTGTGGCTCTTTGG...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp ACATCTTGCCCATTTCCTCAGAAACCCTCTTCAGGAACCTGCAGTCCAGGAGGACACGGACTTCCTGGTTaGCATCATCAGTGTAACTTC +
Preference number: 5 (lower is better)
Translates to: TSCPFPQKPSSGTCSPGGHGLPG*HHQCNF
Trigger: GAAGTTACACTGATGATGCAAACCAGGAAGTCCGTG...TCCTCCTGGACTGCAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR CAA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCATGCACTCATGCAACTaGCTTCTCTCACTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: SSITLDMQQDVKQARRWRMHSCN*LLSLSL
Trigger: CAAAGAGAGTGAGAGAAGCAAGTTGCATGAGTGCAT...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCCCAAAACTGGAATGTTaGCAGTGGGGAAGTTATAGC +
Preference number: 5 (lower is better)
Translates to: SSITLDMQQDVKQARRWRPKLEC*QWGSYS
Trigger: GCTATAACTTCCCCACTGCAAACATTCCAGTTTTGG...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCACCGACCACCCTCTTTaGAGGCTTCTGAAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTTDHPL*RLLKEG
Trigger: TCCTTCTTTCAGAAGCCTCAAAAGAGGGTGGTCGGT...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271234.13
ENST00000424449.2
CDS-3UTR CAA 90 bp GCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATCTGACAGATAGTAACCAGATTTCTCAATaGTTTCGCATAGTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: ARRWRRQTLTDGKDLTDSNQISQ*FRIVLF
Trigger: GAACAGAACTATGCGAAACAATTGAGAAATCTGGTT...ACTATCTGTCAGATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCGGTTCAAAACCAGATTaGAAGGAGTCTACCACCATT +
Preference number: 5 (lower is better)
Translates to: SSITLDMQQDVKQARRWRGSKPD*KESTTI
Trigger: AATGGTGGTAGACTCCTTCAAATCTGGTTTTGAACC...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCTTTCCTACTGTGGTTTaGGCATCCATCTTCCCACTC +
Preference number: 5 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSFPTVV*ASIFPL
Trigger: GAGTGGGAAGATGGATGCCAAAACCACAGTAGGAAA...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCCCCTGGATCCCCCATTaGTGGATTCTTCTCATATAC +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTPWIPH*WILLIY
Trigger: GTATATGAGAAGAATCCACAAATGGGGGATCCAGGG...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCCACGGACTTCCTGGTTaGCATCATCAGTGTAACTTC +
Preference number: 5 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSHGLPG*HHQCNF
Trigger: GAAGTTACACTGATGATGCAAACCAGGAAGTCCGTG...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp CAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGCTTCACCTTCTTTCATaGCTAGAGTACCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: QDVKQARRWRRQTLTDGKLHLLS*LEYLHY
Trigger: ATAATGAAGGTACTCTAGCAATGAAAGAAGGTGAAG...CTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCCTTCACCTTCTTTCATaGCTAGAGTACCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGLHLLS*LEYLHY
Trigger: ATAATGAAGGTACTCTAGCAATGAAAGAAGGTGAAG...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCAGCACTGCACAATCCTaGACTGCACAGTGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSSTAQS*TAQCFQ
Trigger: TTGGAAACACTGTGCAGTCAAGGATTGTGCAGTGCT...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR CAA 90 bp CAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAACAAAACAAGGCTTaGACAAGAACAAGGGAATCT +
Preference number: 5 (lower is better)
Translates to: QQDVKQARRWRRQTLTDGKQNKA*TRTRES
Trigger: AGATTCCCTTGTTCTTGTCAAAGCCTTGTTTTGTTT...GCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATCCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCTTTGGATGAACGTTaGGGGCAGTACTTCTTAACC +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTSLDER*GQYFLT
Trigger: GGTTAAGAAGTACTGCCCCAAACGTTCATCCAAAGA...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCAGATTCAACTGCTGTTaGGCCTTTTCAACATCTGCC +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTRFNCC*AFSTSA
Trigger: GGCAGATGTTGAAAAGGCCAAACAGCAGTTGAATCT...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCGGAGTCTACCACCATTaGAGAGTCTCTTCTTTCATC +
Preference number: 5 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSGVYHH*RVSSFI
Trigger: GATGAAAGAAGAGACTCTCAAATGGTGGTAGACTCC...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTTCTGTCTCCGAGCTCTaGTCCATCCGTCACCTTTGT +
Preference number: 5 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSSVSEL*SIRHLC
Trigger: ACAAAGGTGACGGATGGACAAGAGCTCGGAGACAGA...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCATGCACTCATGCAACTaGCTTCTCTCACTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSMHSCN*LLSLSL
Trigger: CAAAGAGAGTGAGAGAAGCAAGTTGCATGAGTGCAT...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp GATGTTAAGCAAGCACGGAGGTGGCGCAGGCAGACACTGACAGATGGCAAGGATAAACAAAACAAGGCTTaGACAAGAACAAGGGAATCT +
Preference number: 5 (lower is better)
Translates to: DVKQARRWRRQTLTDGKDKQNKA*TRTRES
Trigger: AGATTCCCTTGTTCTTGTCAAAGCCTTGTTTTGTTT...ATCCTTGCCATCTGTCAGTGTCTGCCTGCGCCACCTCCGTGCTTGCTTAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS GCA 90 bp CCTCAGGACTTTCTCGTCCCTGTGTTACAAGATGATTTATGTCACTaGTATGTCTTCTGTCTCCTCTCCCACCTGTTTTGCCTTCGACTT +
Preference number: 5 (lower is better)
Translates to: PQDFLVPVLQDDLCH*YVFCLLSHLFCLRL
Trigger: AAGTCGAAGGCAAAACAGGTGGGAGAGGAGACAGAAGACATAGCAGTGACATAAATCATCTTGTAACACAGGGACGAGAAAGTCCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
ENST00000603526.1
CDS CCA 90 bp CTGCACCTTTACTGTTTTTCTCTAGAGTTACATCTATGTATGACGTaGGAACGTAGCCTTCTTCACCGTTCTGTCTCCGAGCTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: LHLYCFSLELHLCMT*ERSLLHRSVSELLS
Trigger: GGACAAGAGCTCGGAGACAGAACGGTGAAGAAGGCTACGTTCCCACGTCATACATAGATGTAACTCTAGAGAAAAACAGTAAAGGTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS-3UTR CAA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAACCAGATTTCTCAATaGTTTCGCATAGTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: SSITLDMQQDVKQARRWRNQISQ*FRIVLF
Trigger: GAACAGAACTATGCGAAACAATTGAGAAATCTGGTT...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGCGTGGCTCTTCATCTTaGGATGAACGTTTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: GEVIAVCTNTKMETLVLERGSSS*DERLGQ
Trigger: CTGCCCCAAACGTTCATCCAAAGATGAAGAGCCACG...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCGGTTCAAAACCAGATTaGAAGGAGTCTACCACCATT +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTGSKPD*KESTTI
Trigger: AATGGTGGTAGACTCCTTCAAATCTGGTTTTGAACC...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTATTCCCACTCTCCTGTTaGGATGCACTGATAGTCCCA +
Preference number: 5 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLFPLSC*DALIVP
Trigger: TGGGACTATCAGTGCATCCAAACAGGAGAGTGGGAA...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTTTCCCACTCTCCTGTTaGGATGCACTGATAGTCCCA +
Preference number: 5 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSFPLSC*DALIVP
Trigger: TGGGACTATCAGTGCATCCAAACAGGAGAGTGGGAA...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGTCTGTCTCCGAGCTCTaGTCCATCCGTCACCTTTGT +
Preference number: 5 (lower is better)
Translates to: GEVIAVCTNTKMETLVLESVSEL*SIRHLC
Trigger: ACAAAGGTGACGGATGGACAAGAGCTCGGAGACAGA...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AGCTCAATCACGCTAGACATGCAACAGGATGTTAAGCAAGCACGGAGGTGGCGCAAACAAAACAAGGCTTaGACAAGAACAAGGGAATCT +
Preference number: 5 (lower is better)
Translates to: SSITLDMQQDVKQARRWRKQNKA*TRTRES
Trigger: AGATTCCCTTGTTCTTGTCAAAGCCTTGTTTTGTTT...GCGCCACCTCCGTGCTTGCTTAACATCCTGTTGCATGTCTAGCGTGATTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS CCA 90 bp AGGAACCTTTACTGTTTTTCTCTAGAGTTACATCTATGTATGACGTaGGAACGTAGCCTTCTTCACCGTTCTGTCTCCGAGCTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RNLYCFSLELHLCMT*ERSLLHRSVSELLS
Trigger: GGACAAGAGCTCGGAGACAGAACGGTGAAGAAGGCTACGTTCCCACGTCATACATAGATGTAACTCTAGAGAAAAACAGTAAAGGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCATGATGGGAATAACTTaGCGTTCTGAGTCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTMMGIT*RSESAN
Trigger: ATTTGCTGACTCAGAACGCAAAGTTATTCCCATCAT...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGAGCCACAATTTGCCCTaGGCCTTTCCTACTGTGGTT +
Preference number: 5 (lower is better)
Translates to: GEVIAVCTNTKMETLVLESHNLP*AFPTVV
Trigger: AACCACAGTAGGAAAGGCCAAGGGCAAATTGTGGCT...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGCCAAAGAGCCACAATTaGCCCTTGGCCTTTCCTACT +
Preference number: 5 (lower is better)
Translates to: GEVIAVCTNTKMETLVLEPKSHN*PLAFPT
Trigger: AGTAGGAAAGGCCAAGGGCAAATTGTGGCTCTTTGG...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTCACGGACTTCCTGGTTaGCATCATCAGTGTAACTTC +
Preference number: 5 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSHGLPG*HHQCNF
Trigger: GAAGTTACACTGATGATGCAAACCAGGAAGTCCGTG...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTACACGGACTTCCTGGTTaGCATCATCAGTGTAACTTC +
Preference number: 5 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLHGLPG*HHQCNF
Trigger: GAAGTTACACTGATGATGCAAACCAGGAAGTCCGTG...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGACCGACCACCCTCTTTaGAGGCTTCTGAAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: GEVIAVCTNTKMETLVLETDHPL*RLLKEG
Trigger: TCCTTCTTTCAGAAGCCTCAAAAGAGGGTGGTCGGT...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271234.13
CDS-3UTR CAA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCAACCAGATTTCTCAATaGTTTCGCATAGTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSNQISQ*FRIVLF
Trigger: GAACAGAACTATGCGAAACAATTGAGAAATCTGGTT...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTAGGAGTCTACCACCATTaGAGAGTCTCTTCTTTCATC +
Preference number: 5 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLGVYHH*RVSSFI
Trigger: GATGAAAGAAGAGACTCTCAAATGGTGGTAGACTCC...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp CTCTTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCCTTCACCTTCTTTCATaGCTAGAGTACCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: LFEPDNSNTLPQKQLHVTLHLLS*LEYLHY
Trigger: ATAATGAAGGTACTCTAGCAATGAAAGAAGGTGAAG...GGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp TTTGAGCCTGACAACTCTAATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCCTTCACCTTCTTTCATaGCTAGAGTACCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: FEPDNSNTLPQKQLHVTSLHLLS*LEYLHY
Trigger: ATAATGAAGGTACTCTAGCAATGAAAGAAGGTGAAG...GGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGGCTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGTCTTTGGATGAACGTTaGGGGCAGTACTTCTTAACC +
Preference number: 5 (lower is better)
Translates to: GEVIAVCTNTKMETLVLESLDER*GQYFLT
Trigger: GGTTAAGAAGTACTGCCCCAAACGTTCATCCAAAGA...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTAGCACATGTCAAGATATaGTTGAGCTTTTCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLAHVKI*LSFSSF
Trigger: GAAGGACGAAAAGCTCAACAATATCTTGACATGTGC...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGAGATTCAACTGCTGTTaGGCCTTTTCAACATCTGCC +
Preference number: 5 (lower is better)
Translates to: GEVIAVCTNTKMETLVLERFNCC*AFSTSA
Trigger: GGCAGATGTTGAAAAGGCCAAACAGCAGTTGAATCT...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS GCA 90 bp TCCTACTGTGGTTTTGGCATCCATCTTCCCACTCTCCTGTTTGGATaGACTGATAGTCCCATCAGAAATGGTTCTATATATATGTTGACT +
Preference number: 5 (lower is better)
Translates to: SYCGFGIHLPTLLFG*TDSPIRNGSIYMLT
Trigger: AGTCAACATATATATAGAACCATTTCTGATGGGACTATCAGTGCATCCAAACAGGAGAGTGGGAAGATGGATGCCAAAACCACAGTAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS-3UTR CAA 90 bp GGTGCTGAAGATGTATCACGTTTCAAAGAGTTCTTTCAACTGGGCTGTAGGCTACATGTCAAGATATTGTaGAGCTTTTCGTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GAEDVSRFKEFFQLGCRLHVKIL*SFSSFL
Trigger: CAAGAAGGACGAAAAGCTCAACAATATCTTGACATG...TAGCCTACAGCCCAGTTGAAAGAACTCTTTGAAACGTGATACATCTTCAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GTTCACAGCTACTTCTTCGTAATGCCAAAACTGGAATGTTTGCAGTGGGGAAGTATGATGGGAATAACTTaGCGTTCTGAGTCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: VHSYFFVMPKLECLQWGSMMGIT*RSESAN
Trigger: ATTTGCTGACTCAGAACGCAAAGTTATTCCCATCAT...ACTTCCCCACTGCAAACATTCCAGTTTTGGCATTACGAAGAAGTAGCTGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp GGGGAAGTTATAGCAGTGTGCACAAATACTAAGATGGAAACATTAGTGCTGGAGCATGTCAAGATATTGTaGAGCTTTTCGTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GEVIAVCTNTKMETLVLEHVKIL*SFSSFL
Trigger: CAAGAAGGACGAAAAGCTCAACAATATCTTGACATG...CTCCAGCACTAATGTTTCCATCTTAGTATTTGTGCACACTGCTATAACTTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGACCCTGGATCCCCCATTaGTGGATTCTTCTCATATAC +
Preference number: 5 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGPWIPH*WILLIY
Trigger: GTATATGAGAAGAATCCACAAATGGGGGATCCAGGG...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGAATGCACTCATGCAACTaGCTTCTCTCACTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGMHSCN*LLSLSL
Trigger: CAAAGAGAGTGAGAGAAGCAAGTTGCATGAGTGCAT...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGACCAAAACTGGAATGTTaGCAGTGGGGAAGTTATAGC +
Preference number: 5 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGPKLEC*QWGSYS
Trigger: GCTATAACTTCCCCACTGCAAACATTCCAGTTTTGG...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp AAATGGTACACTATTGTTGGCTTTTTCTTTTGTGGGAATAACTGTGAACTAGGATCTTTCATAACTCTGTaGTGCCTTTTCTGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: KWYTIVGFFFCGNNCELGSFITL*CLFCLS
Trigger: AGAGAGGCAGAAAAGGCACAACAGAGTTATGAAAGA...TCCTAGTTCACAGTTATTCCCACAAAAGAAAAAGCCAACAATAGTGTACCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS-3UTR CAA 90 bp TTCCCCTCCATTCAAGGTTTCCTCTATCTTCAAATGTGTATTTTTCTATGTAACCATGTCAAGATATTGTaGAGCTTTTCGTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: FPSIQGFLYLQMCIFLCNHVKIL*SFSSFL
Trigger: CAAGAAGGACGAAAAGCTCAACAATATCTTGACATG...GTTACATAGAAAAATACACATTTGAAGATAGAGGAAACCTTGAATGGAGGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260506.12
CDS CCA 72 bp CCGTGCCCCAGCTCATGGCGGAACTTTCTGGCCGTCTaGCGGTGCCGCTGTCCTTCAGTCTGTCGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: PCPSSWRNFLAV*RCRCPSVCRLH
Trigger: GTGGAGCCGACAGACTGAAGGACAGCGGCACCGCCAGACGGCCAGAAAGTTCCGCCATGAGCTGGGGCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS CCA 72 bp CCACAGCTCCGTGCCCCAGCTCATGGCGGAACTTTCTaGCCGTCTGGCGGTGCCGCTGTCCTTCAGTCTGTC +
Preference number: 6 (lower is better)
Translates to: PQLRAPAHGGTF*PSGGAAVLQSV
Trigger: GACAGACTGAAGGACAGCGGCACCGCCAGACGGCCAGAAAGTTCCGCCATGAGCTGGGGCACGGAGCTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS GCA 72 bp CCCAGCTCATGGCGGAACTTTCTGGCCGTCTGGCGGTaGCGCTGTCCTTCAGTCTGTCGGCTCCACAGTCTG +
Preference number: 6 (lower is better)
Translates to: PSSWRNFLAVWR*RCPSVCRLHSL
Trigger: CAGACTGTGGAGCCGACAGACTGAAGGACAGCGGCACCGCCAGACGGCCAGAAAGTTCCGCCATGAGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS CCA 72 bp TGTCGAACTGATCCCACAGCTCCGTGCCCCAGCTCATaGCGGAACTTTCTGGCCGTCTGGCGGTGCCGCTGT +
Preference number: 6 (lower is better)
Translates to: CRTDPTAPCPSS*RNFLAVWRCRC
Trigger: ACAGCGGCACCGCCAGACGGCCAGAAAGTTCCGCCATGAGCTGGGGCACGGAGCTGTGGGATCAGTTCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000271234.13
CDS CAA 90 bp CATTGTGGTGACCATGCTGCTGGGGTGGCCCACGGACTTCCTGGTTaGCATCATCAGTGTAACTTCCCTCAGGACTTTCTCGTCCCTGTG +
Preference number: 6 (lower is better)
Translates to: HCGDHAAGVAHGLPG*HHQCNFPQDFLVPV
Trigger: CACAGGGACGAGAAAGTCCTGAGGGAAGTTACACTGATGATGCAAACCAGGAAGTCCGTGGGCCACCCCAGCAGCATGGTCACCACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS CAA 72 bp GACCATGCTGCTGGGGTGGCCCACGGACTTCCTGGTTaGCATCATCAGTGTAACTTCCCTCAGGACTTTCTC +
Preference number: 6 (lower is better)
Translates to: DHAAGVAHGLPG*HHQCNFPQDFL
Trigger: GAGAAAGTCCTGAGGGAAGTTACACTGATGATGCAAACCAGGAAGTCCGTGGGCCACCCCAGCAGCATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS CAA 72 bp GCTGGGCCCTTTGGCTTCTTTCCAAAGAGCCACAATTaGCCCTTGGCCTTTCCTACTGTGGTTTTGGCATCC +
Preference number: 6 (lower is better)
Translates to: AGPFGFFPKSHN*PLAFPTVVLAS
Trigger: GGATGCCAAAACCACAGTAGGAAAGGCCAAGGGCAAATTGTGGCTCTTTGGAAAGAAGCCAAAGGGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260506.12
ENST00000370253.6
CDS CCA 72 bp GCCACAATTTGCCCTTGGCCTTTCCTACTGTGGTTTTaGCATCCATCTTCCCACTCTCCTGTTTGGATGCAC +
Preference number: 6 (lower is better)
Translates to: ATICPWPFLLWF*HPSSHSPVWMH
Trigger: GTGCATCCAAACAGGAGAGTGGGAAGATGGATGCCAAAACCACAGTAGGAAAGGCCAAGGGCAAATTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS CCA 72 bp ATCATCAAACTCATTGTGGTGACCATGCTGCTGGGGTaGCCCACGGACTTCCTGGTTTGCATCATCAGTGTA +
Preference number: 6 (lower is better)
Translates to: IIKLIVVTMLLG*PTDFLVCIISV
Trigger: TACACTGATGATGCAAACCAGGAAGTCCGTGGGCCACCCCAGCAGCATGGTCACCACAATGAGTTTGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS CAA 72 bp AGCCACAATTTGCCCTTGGCCTTTCCTACTGTGGTTTaGGCATCCATCTTCCCACTCTCCTGTTTGGATGCA +
Preference number: 6 (lower is better)
Translates to: SHNLPLAFPTVV*ASIFPLSCLDA
Trigger: TGCATCCAAACAGGAGAGTGGGAAGATGGATGCCAAAACCACAGTAGGAAAGGCCAAGGGCAAATTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS CAA 72 bp GACTGTGGCTTTGGCTTCTTTCCAAAGAGCCACAATTaGCCCTTGGCCTTTCCTACTGTGGTTTTGGCATCC +
Preference number: 6 (lower is better)
Translates to: DCGFGFFPKSHN*PLAFPTVVLAS
Trigger: GGATGCCAAAACCACAGTAGGAAAGGCCAAGGGCAAATTGTGGCTCTTTGGAAAGAAGCCAAAGCCACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271234.13
ENST00000424449.2
CDS CAA 72 bp CCCCAAAAGCAGCTGCATGTAACCTCCTTCAACATCTaGCCCATTTCCTCAGAAACCCTCTTCAGGAACCTT +
Preference number: 6 (lower is better)
Translates to: PQKQLHVTSFNI*PISSETLFRNL
Trigger: AAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGTTGAAGGAGGTTACATGCAGCTGCTTTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS CAA 90 bp AATACCCTCCCCCAAAAGCAGCTGCATGTAACCTCCTTCAACATCTaGCCCATTTCCTCAGAAACCCTCTTCAGGAACCTTTACTGTTTT +
Preference number: 6 (lower is better)
Translates to: NTLPQKQLHVTSFNI*PISSETLFRNLYCF
Trigger: AAAACAGTAAAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGTTGAAGGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
CDS TCA 72 bp TACACACGAGGTAAACCGTGGCTCTTCATCTTTGGATaGACGTTTGGGGCAGTACTTCTTAACCAGATTTCT +
Preference number: 6 (lower is better)
Translates to: YTRGKPWLFIFG*TFGAVLLNQIS
Trigger: AGAAATCTGGTTAAGAAGTACTGCCCCAAACGTTCATCCAAAGATGAAGAGCCACGGTTTACCTCGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
CDS GCA 72 bp TTTCTCGTCCCTGTGTTACAAGATGATTTATGTCACTaGTATGTCTTCTGTCTCCTCTCCCACCTGTTTTGC +
Preference number: 6 (lower is better)
Translates to: FLVPVLQDDLCH*YVFCLLSHLFC
Trigger: GCAAAACAGGTGGGAGAGGAGACAGAAGACATAGCAGTGACATAAATCATCTTGTAACACAGGGACGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2
ENST00000603526.1
CDS CCA 72 bp TACTGTTTTTCTCTAGAGTTACATCTATGTATGACGTaGGAACGTAGCCTTCTTCACCGTTCTGTCTCCGAG +
Preference number: 6 (lower is better)
Translates to: YCFSLELHLCMT*ERSLLHRSVSE
Trigger: CTCGGAGACAGAACGGTGAAGAAGGCTACGTTCCCACGTCATACATAGATGTAACTCTAGAGAAAAACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260506.12
ENST00000271234.13
ENST00000370253.6
ENST00000424449.2