RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FMNL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000184922

Ensembl transcript IDs: ENST00000328118.7, ENST00000331495.8, ENST00000585852.5, ENST00000586643.5, ENST00000587489.5, ENST00000587856.1, ENST00000589911.1, ENST00000591434.1, ENST00000592006.5, ENST00000592415.1, ENST00000592527.1

Found 513 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTaGCCTCTGTGGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCG +
Preference number: 1 (lower is better)
Translates to: GWVLQAAFGGRGGRC*PLWPRGGCTSPFEA
Trigger: CGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGCACCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
3UTR CCA 90 bp CTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTaGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGC +
Preference number: 1 (lower is better)
Translates to: LQAAFGGRGGRCCPL*PRGGCTSPFEAGHS
Trigger: GCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
3UTR GCA 90 bp TTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATaGTGCCCTCTGTGGCCAAGAGGAGGATGCACCAGCCCGTTTGAG +
Preference number: 1 (lower is better)
Translates to: LGWVLQAAFGGRGGR*CPLWPRGGCTSPFE
Trigger: CTCAAACGGGCTGGTGCATCCTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
3UTR-3UTR GCA 90 bp GACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCGGGGTATCAGCGCCTaGCTCCTGGGCAGCGGCTTC +
Preference number: 2 (lower is better)
Translates to: DGHCGGLCLRGCRAGSADRGISA*LLGSGF
Trigger: GAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCG...ATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
3UTR-3UTR TCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGGTCGCTCTCATAAATaGGTGGCTCCTTCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: RGTPTGTAAACVCADVGLGRSHK*VAPSAA
Trigger: GGCAGCAGAAGGAGCCACTCATTTATGAGAGCGACC...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328118.7
3UTR-3UTR CCA 90 bp TTGCCGGTGCGGGCCGTGAAGGGCACCGTCTTGATCACTGAGTGGGGGTGGGGCGATGAGGTCCATCTGTaGCCGCCGGGCCTTTGGCGG +
Preference number: 2 (lower is better)
Translates to: LPVRAVKGTVLITEWGWGDEVHL*PPGLWR
Trigger: CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATC...GCCCCACCCCCACTCAGTGATCAAGACGGTGCCCTTCACGGCCCGCACCGGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589911.1
3UTR-3UTR GCA 90 bp GAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACTTGGGTGCTGGGGCGGCGGCCTGTGTCTaGGCGGATGTAGGGCTGGTT +
Preference number: 2 (lower is better)
Translates to: EMRSICGRRAFGGDLGAGAAACV*ADVGLV
Trigger: AACCAGCCCTACATCCGCGCAGACACAGGCCGCCGC...CCCAGCACCCAAGTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
3UTR-3UTR GCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCCCTGCAGAATCCACCTaGAGAAATAGCGGCTACAGC +
Preference number: 2 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGPAEST*RNSGYS
Trigger: GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGG...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331495.8
3UTR-3UTR CCA 90 bp GCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCTGTGATGATGTCCCTTTGGCGGTGACTTaGGTGCTGGGGGCTCCCCTT +
Preference number: 2 (lower is better)
Translates to: AACVCADVGLVPQICDDVPLAVT*VLGAPL
Trigger: AAGGGGAGCCCCCAGCACCCAAGTCACCGCCAAAGG...GACATCATCACAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328118.7
3UTR-3UTR GCA 90 bp GCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCTGTGATGATGTCATGAGTGGCTCCTTCTaGTGCCTCCGTTTCAGCTCA +
Preference number: 2 (lower is better)
Translates to: AACVCADVGLVPQICDDVMSGSF*CLRFSS
Trigger: TGAGCTGAAACGGAGGCAGCAGAAGGAGCCACTCAT...GACATCATCACAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
3UTR-3UTR TCA 90 bp GTGTGGCAGCCAGTCCCCCAGAGGATAGCGCATTGGGTCAGAAGAAAGCATAGACCGGGCCTTTGGCGGTaGCTAGGGGGAATTTATAGC +
Preference number: 2 (lower is better)
Translates to: VWQPVPQRIAHWVRRKHRPGLWR*LGGIYS
Trigger: GCTATAAATTCCCCCTAGTCACCGCCAAAGGCCCGG...TCTATGCTTTCTTCTGACCCAATGCGCTATCCTCTGGGGGACTGGCTGCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589911.1
3UTR-3UTR CCA 90 bp CTCCTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAACTGGGGATGTGGTCTTaGGGTTCTCTCCGAAGTACT +
Preference number: 2 (lower is better)
Translates to: LLLSFLVGLNEAAKEGEELGMWS*GSLRST
Trigger: AGTACTTCGGAGAGAACCCCAAGACCACATCCCCAG...TTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
3UTR TCA 72 bp GCCACAGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTaGGGACCACCTTCCTTGAGCCTCAGCCTGTCCACG +
Preference number: 3 (lower is better)
Translates to: ATAEEGLPGQPS*GPPSLSLSLST
Trigger: CGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTGTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
3UTR GCA 72 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTaGGCGGATGTAGGGCTGGTTCCGCAGATCTGTGAT +
Preference number: 3 (lower is better)
Translates to: RGTPTGTAAACV*ADVGLVPQICD
Trigger: ATCACAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328118.7
3UTR CCA 72 bp GCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTaGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCG +
Preference number: 3 (lower is better)
Translates to: AFGGRGGRCCPL*PRGGCTSPFEA
Trigger: CGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
3UTR GCA 72 bp GTGCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATaGTGCCCTCTGTGGCCAAGAGGAGGATGCACCAGC +
Preference number: 3 (lower is better)
Translates to: VLQAAFGGRGGR*CPLWPRGGCTS
Trigger: GCTGGTGCATCCTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
3UTR TCA 72 bp GTGGCTCCTTCTGCTGCCTCCGTTTCAGCTCAGAGATaGGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTG +
Preference number: 3 (lower is better)
Translates to: VAPSAASVSAQR*GPSVAAGPLAV
Trigger: CACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCAGAAGGAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000589911.1
3UTR GCA 72 bp GCCTGTCCACGGCCCCACACCCCTGCAGAATCCACCTaGAGAAATAGCGGCTACAGCGAGAGGTCGGAGGTG +
Preference number: 3 (lower is better)
Translates to: ACPRPHTPAEST*RNSGYSERSEV
Trigger: CACCTCCGACCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
3UTR TCA 72 bp GATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTaGCTAGGGGGAATTTATAGCTCCAGCTCCAGGATG +
Preference number: 3 (lower is better)
Translates to: DEVHLWPPGLWR*LGGIYSSSSRM
Trigger: CATCCTGGAGCTGGAGCTATAAATTCCCCCTAGTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589911.1
3UTR TCA 72 bp TGTCTTCAATGGCCCCATCACGGTCGCTCTCATAAATaGGTGGCTCCTTCTGCTGCCTCCGTTTCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: CLQWPHHGRSHK*VAPSAASVSAQ
Trigger: CTGAGCTGAAACGGAGGCAGCAGAAGGAGCCACTCATTTATGAGAGCGACCGTGATGGGGCCATTGAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000589911.1
CDS-3UTR GCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTCGCTGCCGGCCGCGTTaGCCATGGTGGTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRARCRPR*PWWSPP
Trigger: GGGTGGGGACCACCATGGGCAACGCGGCCGGCAGCG...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGACGCCGACGGGCACTaGGGCGGCCTGTGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLDADGH*GGLCLR
Trigger: GCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTC...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGCTCTGGGGGACGCCTaGAGGGCCCCATGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLALGDA*RAPWRS
Trigger: CGACCGCCATGGGGCCCTCCAGGCGTCCCCCAGAGC...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGACGGTCCTCGGGGCTaGGGCTTGCGGGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRADGPRG*GLRGRG
Trigger: ACCTCGCCCCCGCAAGCCCCAGCCCCGAGGACCGTC...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTCCGGGCCTTTGGCGGTaGCTTGGGTGCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRAPGLWR*LGCWGL
Trigger: GAGCCCCCAGCACCCAAGTCACCGCCAAAGGCCCGG...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR TCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTCCCGGTTGGCCTCAATaGGTGTCGCCTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRAPGWPQ*VSPCWG
Trigger: CCCCCAGCAAGGCGACACTCATTGAGGCCAACCGGG...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGTCCGCAGGGCCTTCCTaGTGTGGGCTGGGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLSAGPS*CGLGSA
Trigger: AGCTGACCCCAGCCCACAGCAGGAAGGCCCTGCGGA...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp ACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCCGCGTTGCCCATGGTaGTCCCCACCCAGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: TPTGTAAACVCADVGLVPPRCPW*SPPSRP
Trigger: TGGCCGGCTGGGTGGGGACCACCATGGGCAACGCGG...CGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGCGGGGAGGATCTCGATaGAGACAGCATCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLRGGSR*RQHPPA
Trigger: GGCCGGGGGATGCTGTCTCCATCGAGATCCTCCCCG...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR TCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCCCGGGCCTTTGGCGGTaGCTTGGGTGCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGPGLWR*LGCWGL
Trigger: GAGCCCCCAGCACCCAAGTCACCGCCAAAGGCCCGG...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCAGCACCAGCACATGGTaGGCCCCGACCCGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GAARPAELRTTFLEPQPVSTSTW*APTRSP
Trigger: CGGGCTGCGGGTCGGGGCTCACCATGTGCTGGTGCT...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587489.5
CDS-3UTR GCA 90 bp GACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATGCACCGGCCCGTCAGTaGCCGGAGGTGGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: DGHCGGLCLRGCRAGSADAPARQ*PEVVAV
Trigger: CACCGCCACCACCTCCGGGCACTGACGGGCCGGTGC...ATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGCAATGGCTTGGCAGATaGGCTCGGCCCCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLQWLGR*ARPPGC
Trigger: GCAACCTGGGGGCCGAGCGCATCTGCCAAGCCATTG...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTGACGCCGACGGGCACTaGGGCGGCCTGTGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGADADGH*GGLCLR
Trigger: GCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTC...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTCCTTTGGCGGTGACTTaGGTGCTGGGGGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRAPLAVT*VLGAPL
Trigger: AAGGGGAGCCCCCAGCACCCAAGTCACCGCCAAAGG...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CCA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTGACGGTCCTCGGGGCTaGGGCTTGCGGGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGADGPRG*GLRGRG
Trigger: ACCTCGCCCCCGCAAGCCCCAGCCCCGAGGACCGTC...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACCCGGGCCTTTGGCGGTaGCTTGGGTGCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: AARPAELRTTFLEPQPVHPGLWR*LGCWGL
Trigger: GAGCCCCCAGCACCCAAGTCACCGCCAAAGGCCCGG...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCCCGGCCAGCCGAGCTaGGGACCACCTTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GAARPAELRTTFLEPQPVPGQPS*GPPSLS
Trigger: GCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGG...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCGGGGTATCAGCGCCTaGCTCCTGGGCAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: SGGGAARPAELRTTFLEPRGISA*LLGSGF
Trigger: GAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCG...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGCAGCGGAGGAGGGGCTaGCCGGCCAGCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKQRRRG*PASRAE
Trigger: CTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTG...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GGGCTCCCCTTTGCCCGGGGTATCAGCGCCTGCCTCCTGGGCAGCGGCTTCTTTCCGCGTTGCCCATGGTaGTCCCCACCCAGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GLPFARGISACLLGSGFFPRCPW*SPPSRP
Trigger: TGGCCGGCTGGGTGGGGACCACCATGGGCAACGCGG...AAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp GAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACTTGGGTGCTGGGGCTCTGGGGGACGCCTaGAGGGCCCCATGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: EMRSICGRRAFGGDLGAGALGDA*RAPWRS
Trigger: CGACCGCCATGGGGCCCTCCAGGCGTCCCCCAGAGC...CCCAGCACCCAAGTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTTGCGGCATGAGCAGCTaGGCTGTGTCCGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRACGMSS*AVSGKL
Trigger: CAACTTCCCGGACACAGCCCAGCTGCTCATGCCGCA...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGCAGCTTGTCCATGGTaGGCGAGTTGGCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLAACPW*ASWPSG
Trigger: TCCTGAGGGCCAACTCGCCCACCATGGACAAGCTGC...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR TCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTAGGGTGGACCCTTGCTaGGGTCTTCCACAGACTGCT +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRARVDPC*GLPQTA
Trigger: AGCAGTCTGTGGAAGACCTCAGCAAGGGTCCACCCT...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGCTTGTCACTCTCGGTaGGCCGAAGCCTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRAACHSR*AEASPS
Trigger: ACTTGGAGAGGCTTCGGCTCACCGAGAGTGACAAGC...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR TCA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCCGGTTGGCCTCAATaGGTGTCGCCTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGGAARPAELRTTFLEPQPGWPQ*VSPCWG
Trigger: CCCCCAGCAAGGCGACACTCATTGAGGCCAACCGGG...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACATGCACCAGCCCGTTTaGGGCGGGCCACAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: AARPAELRTTFLEPQPVHMHQPV*GGPQRR
Trigger: CCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCAT...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGACCGGGCGGCGAGCTaGAGGGTTGGGGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AARPAELRTTFLEPQPVHDRAAS*RVGGGS
Trigger: ACTTCCTCCCCCAACCCTGCAGCTCGCCGCCCGGTC...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGCGCTGCCGGCCGCGTTaGCCATGGTGGTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRRCRPR*PWWSPP
Trigger: GGGTGGGGACCACCATGGGCAACGCGGCCGGCAGCG...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTAGCGCCACTTGCTCCTaGAGTTCCTCCATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRASATCS*SSSMCS
Trigger: GGAGCACATGGAGGAACTGCAGGAGCAAGTGGCGCT...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGTCAGCAGCGCCACTTaGTCCTGCAGTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRAVSSAT*SCSSSM
Trigger: CATGGAGGAACTGCAGGAGCAAGTGGCGCTGCTGAC...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCTCCGGGAGCCGGCTCTaGTGCAGGTGCGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGSGSRL*CRCEIW
Trigger: CCAGATCTCGCACCTGCAGCAGAGCCGGCTCCCGGA...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGCCTTGTCCAGGAAGTaGAGGTCGCTGTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLALSRK*RSLWKP
Trigger: AGGCTTCCACAGCGACCTGCACTTCCTGGACAAGGC...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCAACTCTAGGCCTCGCTaGAGGGAGCGCACGTCCGCC +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGNSRPR*RERTSA
Trigger: GGCGGACGTGCGCTCCCTGCAGCGAGGCCTAGAGTT...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTCGGGGTATCAGCGCCTaGCTCCTGGGCAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGARGISA*LLGSGF
Trigger: GAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCG...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCGCGGCGGCCTGTGTCTaGGCGGATGTAGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GAARPAELRTTFLEPQPVAAACV*ADVGLV
Trigger: AACCAGCCCTACATCCGCGCAGACACAGGCCGCCGC...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGGACGCCGACGGGCACTaGGGCGGCCTGTGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEEDADGH*GGLCLR
Trigger: GCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTC...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTAGGGGCGGGCGATGCTaGCCTCTGTGGCCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SGGGAARPAELRTTFLEPRGGRC*PLWPRG
Trigger: TCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCT...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTGGAAGGGGCGGGCGATaGTGCCCTCTGTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SGGGAARPAELRTTFLEPGRGGR*CPLWPR
Trigger: TCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCC...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGCGGCCGCGTTGCCCATaGTGGTCCCCACCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEERPRCP*WSPPSR
Trigger: CCGGCTGGGTGGGGACCACCATGGGCAACGCGGCCG...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGAAGTGCAGGTCGCTGTaGAAGCCTGTGAGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLKCRSL*KPVSCG
Trigger: CCCGCAACTCACAGGCTTCCACAGCGACCTGCACTT...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR TCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGCTGCTACCTTTCGGCTaGCCCCACCAGTATCCACAT +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLLLPFG*PHQYPH
Trigger: ATGTGGATACTGGTGGGGTCAGCCGAAAGGTAGCAG...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCTGCCCTTCCGCAGGGTaGTGGCCAAGTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGCPSAG*WPSSWP
Trigger: GGGCCAAGAACTTGGCCATCACCCTGCGGAAGGGCA...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCGAAGCGGTCCTCCTCTaGCAGCTCCTCCATTGGCCG +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGEAVLL*QLLHWP
Trigger: CGGCCAATGGAGGAGCTGTCAGAGGAGGACCGCTTC...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGGAAGCGGTCCTCCTCTaGCAGCTCCTCCATTGGCCG +
Preference number: 4 (lower is better)
Translates to: GGGAARPAELRTTFLEPQEAVLL*QLLHWP
Trigger: CGGCCAATGGAGGAGCTGTCAGAGGAGGACCGCTTC...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGCCCGGCCAGCCGAGCTaGGGACCACCTTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKPGQPS*GPPSLS
Trigger: GCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGG...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GGGCTCCCCTTTGCCCGGGGTATCAGCGCCTGCCTCCTGGGCAGCGGCTTCTTTACCGCCGCTCGGAGTTaGCACAGCGACGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: GLPFARGISACLLGSGFFTAARS*HSDGED
Trigger: ATCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCGGT...AAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp GACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATGCGGCGGCCTGTGTCTaGGCGGATGTAGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: DGHCGGLCLRGCRAGSADAAACV*ADVGLV
Trigger: AACCAGCCCTACATCCGCGCAGACACAGGCCGCCGC...ATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTGCGGCGGCCTGTGTCTaGGCGGATGTAGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGAAAACV*ADVGLV
Trigger: AACCAGCCCTACATCCGCGCAGACACAGGCCGCCGC...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTCGGCCGCGTTGCCCATaGTGGTCCCCACCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGRPRCP*WSPPSR
Trigger: CCGGCTGGGTGGGGACCACCATGGGCAACGCGGCCG...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTGGGCACGGAGGAGGGTaGACCCTTGCTGAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SGGGAARPAELRTTFLEPGHGGG*TLAEVF
Trigger: GAAGACCTCAGCAAGGGTCCACCCTCCTCCGTGCCC...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTTGGACGTCGTCCTTCTaGCTGACGATGCGGGAATTC +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRAWTSSF*LTMREF
Trigger: GAATTCCCGCATCGTCAGCCAGAAGGACGACGTCCA...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTCTGCAATCTTGGCCATaGATTCGTTCTCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRALQSWP*IRSPRP
Trigger: GGGACGCGGAGAACGAATCCATGGCCAAGATTGCAG...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGGTGCGAGATCTGGGCTaGGGGAGCCGGTCGGCACCC +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEEVRDLG*GSRSAP
Trigger: GGGTGCCGACCGGCTCCCCCAGCCCAGATCTCGCAC...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGTGCAGGTGCGAGATCTaGGCTGGGGGAGCCGGTCGG +
Preference number: 4 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKCRCEI*AGGAGR
Trigger: CCGACCGGCTCCCCCAGCCCAGATCTCGCACCTGCA...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GGCCACAGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGGTCGTACGCCTCAATaGCTTGGCAGATGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: GHSGGGAARPAELRTTFLGRTPQ*LGRCAR
Trigger: CCGAGCGCATCTGCCAAGCCATTGAGGCGTACGACC...AAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCCTTTGGCGGTGACTTaGGTGCTGGGGGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GQEEDAPARLRRATAEEGPLAVT*VLGAPL
Trigger: AAGGGGAGCCCCCAGCACCCAAGTCACCGCCAAAGG...CCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGGCTGCAAGCAGCATTTaGGGGAAGGGGCGGGCGATG +
Preference number: 4 (lower is better)
Translates to: GGGAARPAELRTTFLEPQAASSI*GKGRAM
Trigger: CATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTGCTGCAAGCAGCATTTaGGGGAAGGGGCGGGCGATG +
Preference number: 4 (lower is better)
Translates to: SGGGAARPAELRTTFLEPAASSI*GKGRAM
Trigger: CATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTCCAGGCCCAAGTGGGTaGACTCATATTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRAPGPSG*THIAGR
Trigger: TCTTCCTGCAATATGAGTTCACCCACTTGGGCCTGG...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR TCA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCAGTTGCCCAGGAAGGTaGGTGTGGTCATGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: GAARPAELRTTFLEPQPVSCPGR*VWSCAP
Trigger: CGGAGCGCATGACCACACTCACCTTCCTGGGCAACT...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCATTCAGTTGCGGCATaGGCAGCTGGGCTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: SGGGAARPAELRTTFLEPHSVAA*AAGLCP
Trigger: CGGACACAGCCCAGCTGCTCATGCCGCAACTGAATG...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGACCGCCGCTCGGAGTTaGCACAGCGACGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKTAARS*HSDGED
Trigger: ATCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCGGT...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGGGGGGCCTTCTGGGCTaGCTTACTCTTGAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: GGGAARPAELRTTFLEPQGGLLG*LTLESA
Trigger: AGCGCTCTCAAGAGTAAGGCAGCCCAGAAGGCCCCC...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACCAATGGCTTGGCAGATaGGCTCGGCCCCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: AARPAELRTTFLEPQPVHQWLGR*ARPPGC
Trigger: GCAACCTGGGGGCCGAGCGCATCTGCCAAGCCATTG...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTTCCAGGCCCAGAGCCTaGAGGTCGTACGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: SGGGAARPAELRTTFLEPSRPRA*RSYASM
Trigger: CATTGAGGCGTACGACCTGCAGGCTCTGGGCCTGGA...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTTCCTCCATTGGCCGCTaGTCCCGCTCAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGASSIGR*SRSKRV
Trigger: CACCCGCTTTGAGCGGGAGCAGCGGCCAATGGAGGA...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACTCCTCCATTGGCCGCTaGTCCCGCTCAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: AARPAELRTTFLEPQPVHSSIGR*SRSKRV
Trigger: CACCCGCTTTGAGCGGGAGCAGCGGCCAATGGAGGA...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGCAGCAGCGTCTGCTTaGGATCAGTCGACTTCATCT +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLAAASA*DQSTSS
Trigger: AGATGAAGTCGACTGATCGCAAGCAGACGCTGCTGC...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp GAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACTTGGGTGCTGGGAACTCTAGGCCTCGCTaGAGGGAGCGCACGTCCGCC +
Preference number: 4 (lower is better)
Translates to: EMRSICGRRAFGGDLGAGNSRPR*RERTSA
Trigger: GGCGGACGTGCGCTCCCTGCAGCGAGGCCTAGAGTT...CCCAGCACCCAAGTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp GGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGTGGCCAAGAGGAGGATaGACCAGCCCGTTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: GQEEDAPARLRRATAEEGWPRGG*TSPFEA
Trigger: CGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCCA...CCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTTGGCCAAGAGGAGGATaGACCAGCCCGTTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: SGGGAARPAELRTTFLEPWPRGG*TSPFEA
Trigger: CGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCCA...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTCAGCTGGACCTTGTCTaGGGGCAAGTTCATGCAGTT +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRAQLDLV*GQVHAV
Trigger: AACTGCATGAACTTGCCCCCAGACAAGGTCCAGCTG...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCCCGTAGCACCTGCGTaGACTCCTGAACTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GAARPAELRTTFLEPQPVPVAPA*TPELAS
Trigger: AGAGGCGAGTTCAGGAGTCCACGCAGGTGCTACGGG...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACTCAGGTGGCGGCTTTTaGGCACGGAGGAGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: AARPAELRTTFLEPQPVHSGGGF*ARRRVD
Trigger: GTCCACCCTCCTCCGTGCCCAAAAGCCGCCACCTGA...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGCAGGTGCGAGATCTaGGCTGGGGGAGCCGGTCGG +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRCRCEI*AGGAGR
Trigger: CCGACCGGCTCCCCCAGCCCAGATCTCGCACCTGCA...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCGCAGCTTGTCCATGGTaGGCGAGTTGGCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GAARPAELRTTFLEPQPVAACPW*ASWPSG
Trigger: TCCTGAGGGCCAACTCGCCCACCATGGACAAGCTGC...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCCAGCAGCTTGTCCATaGTGGGCGAGTTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GAARPAELRTTFLEPQPVPAACP*WASWPS
Trigger: TGAGGGCCAACTCGCCCACCATGGACAAGCTGCTGG...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACCCTTTGGCGGTGACTTaGGTGCTGGGGGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: AARPAELRTTFLEPQPVHPLAVT*VLGAPL
Trigger: AAGGGGAGCCCCCAGCACCCAAGTCACCGCCAAAGG...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGGATGAGGTCCATCTGTaGCCGCCGGGCCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKDEVHL*PPGLWR
Trigger: CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATC...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTAGTTCAGGGCGCGGTTaGACCTCTCCTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGASSGRG*TSPPAL
Trigger: GAGAGCTGGAGGAGAGGTTCAACCGCGCCCTGAACT...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGTGGCGGTCGATTCGCTaGAGCGCTCCCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEEWRSIR*SAPAGS
Trigger: AGACCCTGCGGGAGCGCTTCAGCGAATCGACCGCCA...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GGGCTCCCCTTTGCCCGGGGTATCAGCGCCTGCCTCCTGGGCAGCGGCTTCTTTCATTCAGTTGCGGCATaGGCAGCTGGGCTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: GLPFARGISACLLGSGFFHSVAA*AAGLCP
Trigger: CGGACACAGCCCAGCTGCTCATGCCGCAACTGAATG...AAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCGCTGTGGAAGCCTGTaGGTTGCGGGTACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GGGAARPAELRTTFLEPQRCGSL*VAGTSQ
Trigger: CTGAGAAGTACCCGCAACTCACAGGCTTCCACAGCG...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCGTTTCAGCTCAGAGATaGGGTCCATCTGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGVSAQR*GPSVAA
Trigger: GGCGGCCACAGATGGACCTCATCTCTGAGCTGAAAC...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGCCTGTGGGCACAGCCTaGGCCGTCTTGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRPVGTA*AVLLSA
Trigger: GGCAGACAGCAAGACGGCTCAGGCTGTGCCCACAGG...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp GGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGGGGTCTCCAACTCCTTaGGCGCCTGGCTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GQEEDAPARLRRATAEEGGSPTP*APGLAV
Trigger: AACAGCTAAGCCAGGCGCGCAAGGAGTTGGAGACCC...CCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGACCGCCGCTCGGAGTTaGCACAGCGACGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEETAARS*HSDGED
Trigger: ATCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCGGT...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATTCCAGGCCCAGAGCCTaGAGGTCGTACGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: DGHCGGLCLRGCRAGSADSRPRA*RSYASM
Trigger: CATTGAGGCGTACGACCTGCAGGCTCTGGGCCTGGA...ATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCCCGGAAGCCATAGGCTaGCCCACGCTTGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGPEAIG*PTLATV
Trigger: AACAGTAGCAAGCGTGGGGCAGCCTATGGCTTCCGG...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGTGGAAGCCTGTGAGTTaGGGGTACTTCTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLWKPVS*GYFSAM
Trigger: CATTGCTGAGAAGTACCCGCAACTCACAGGCTTCCA...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGACCATGCAGTCATCCTaGCGCACAAACTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLTMQSS*RTNSLC
Trigger: ACAGAGAGAGTTTGTGCGGCAGGATGACTGCATGGT...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGCAGCGGAGGAGGGGCTaGCCGGCCAGCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRQRRRG*PASRAE
Trigger: CTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTG...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp TGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGAGGGGCGGGCGATGCTaGCCTCTGTGGCCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CKQHLGEGAGDAALCGQERGGRC*PLWPRG
Trigger: TCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCT...CTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp TGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGGAAGGGGCGGGCGATaGTGCCCTCTGTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: CKQHLGEGAGDAALCGQEGRGGR*CPLWPR
Trigger: TCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCC...CTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp TGTCCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCCGGGCATCGGCTGCTTaGGAGGCGCGGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CPRPHTPAESTCRNSGYSRASAA*EARAAW
Trigger: CCAAGCAGCCCGCGCCTCCCAAGCAGCCGATGCCCG...GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGTACTGGCTCAGCAGCTaGACCTTGTCTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GGGAARPAELRTTFLEPQYWLSS*TLSGGK
Trigger: CTTGCCCCCAGACAAGGTCCAGCTGCTGAGCCAGTA...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTTTCTCGTTGTCATACTaGCTCAGCAGCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRAFSLSY*LSSWTL
Trigger: CAAGGTCCAGCTGCTGAGCCAGTATGACAACGAGAA...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp CCGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTCCAGTTCTGCAATCTTaGCCATGGATTCGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PGDADGHCGGLCLRGCRAPVLQS*PWIRSP
Trigger: CGGAGAACGAATCCATGGCCAAGATTGCAGAACTGG...AGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGGCTCTGGGGGACGCCTaGAGGGCCCCATGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRALGDA*RAPWRS
Trigger: CGACCGCCATGGGGCCCTCCAGGCGTCCCCCAGAGC...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGCGGGGAGGATCTCGATaGAGACAGCATCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRRGGSR*RQHPPA
Trigger: GGCCGGGGGATGCTGTCTCCATCGAGATCCTCCCCG...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGCGGGGAGGATCTCGATaGAGACAGCATCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEERGGSR*RQHPPA
Trigger: GGCCGGGGGATGCTGTCTCCATCGAGATCCTCCCCG...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGTCTGGATGGGCTTCTTaGCCTTCACTCCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GGGAARPAELRTTFLEPQSGWAS*PSLLGP
Trigger: TGGGCCCAGGAGTGAAGGCCAAGAAGCCCATCCAGA...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTTCTGGATGGGCTTCTTaGCCTTCACTCCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SGGGAARPAELRTTFLEPSGWAS*PSLLGP
Trigger: TGGGCCCAGGAGTGAAGGCCAAGAAGCCCATCCAGA...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGACAATCTCCAGGATCTaGCGGAGTTTGTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RGTPTGTAAACVCADVGLTISRI*RSLSED
Trigger: GTCCTCTGACAAACTCCGCCAGATCCTGGAGATTGT...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR TCA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCACGGTTCTCTTCATTaGGGAACTCCTGCACCCACC +
Preference number: 4 (lower is better)
Translates to: GGGAARPAELRTTFLEPQHGSLH*GTPAPT
Trigger: GGTGGGTGCAGGAGTTCCTCAATGAAGAGAACCGTG...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCGCATGCAGGCCACCATaGAGTCGATGTTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GAARPAELRTTFLEPQPVACRPP*SRCCCP
Trigger: AGGACAGCAACATCGACTTCATGGTGGCCTGCATGC...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp GACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATGCTTGTCACTCTCGGTaGGCCGAAGCCTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: DGHCGGLCLRGCRAGSADACHSR*AEASPS
Trigger: ACTTGGAGAGGCTTCGGCTCACCGAGAGTGACAAGC...ATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR TCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGGAAGCGGTCCTCCTCTaGCAGCTCCTCCATTGGCCG +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWREAVLL*QLLHWP
Trigger: CGGCCAATGGAGGAGCTGTCAGAGGAGGACCGCTTC...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCCCCTCAGGAACTCCTTaGGCACCATGCAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGPSGTP*APCSHP
Trigger: AGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGG...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGTTTCAGCTCAGAGATaGGGTCCATCTGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: AARPAELRTTFLEPQPVHVSAQR*GPSVAA
Trigger: GGCGGCCACAGATGGACCTCATCTCTGAGCTGAAAC...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp TGTCCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCATGCACCAGCCCGTTTaGGGCGGGCCACAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: CPRPHTPAESTCRNSGYSMHQPV*GGPQRR
Trigger: CCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCAT...GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCAGCTTTTCAAAGCGGTaGTGCTCCCCACACACCTCC +
Preference number: 4 (lower is better)
Translates to: GAARPAELRTTFLEPQPVSFSKR*CSPHTS
Trigger: GGAGGTGTGTGGGGAGCAGCACCGCTTTGAAAAGCT...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp ACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGTGCAGTTCCTCCATGTaGTCCAGCACAGCGTTCTTG +
Preference number: 4 (lower is better)
Translates to: TPTGTAAACVCADVGLVPCSSSM*SSTAFL
Trigger: CAAGAACGCTGTGCTGGAGCACATGGAGGAACTGCA...CGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp GGGCTCCCCTTTGCCCGGGGTATCAGCGCCTGCCTCCTGGGCAGCGGCTTCTTTAGCGCCACTTGCTCCTaGAGTTCCTCCATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLPFARGISACLLGSGFFSATCS*SSSMCS
Trigger: GGAGCACATGGAGGAACTGCAGGAGCAAGTGGCGCT...AAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGGTCTCCAACTCCTTaGGCGCCTGGCTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: AARPAELRTTFLEPQPVHGSPTP*APGLAV
Trigger: AACAGCTAAGCCAGGCGCGCAAGGAGTTGGAGACCC...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp CGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGGGGAGCCGGCTCTGCTaGAGGTGCGAGATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RPHTPAESTCRNSGYSERGSRLC*RCEIWA
Trigger: AGCCCAGATCTCGCACCTGCAGCAGAGCCGGCTCCC...CCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp GGCCACAGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTAGGCTGCCCCACGCTTaGTACTGTTCATGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: GHSGGGAARPAELRTTFLRLPHA*YCSCSC
Trigger: GCAACTACATGAACAGTAGCAAGCGTGGGGCAGCCT...AAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGCCTTGTCCAGGAAGTaGAGGTCGCTGTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: AARPAELRTTFLEPQPVHALSRK*RSLWKP
Trigger: AGGCTTCCACAGCGACCTGCACTTCCTGGACAAGGC...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTCGGGGTATCAGCGCCTaGCTCCTGGGCAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFRGISA*LLGSGF
Trigger: GAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCG...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000589911.1
CDS-3UTR GCA 90 bp TTGCCGGTGCGGGCCGTGAAGGGCACCGTCTTGATCACTGAGTGGGGGTGGGGCGCTCCAGCTCCAGGATaGCTCCCCATCACCAAAACC +
Preference number: 4 (lower is better)
Translates to: LPVRAVKGTVLITEWGWGAPAPG*LPITKT
Trigger: GGTTTTGGTGATGGGGAGGCATCCTGGAGCTGGAGC...GCCCCACCCCCACTCAGTGATCAAGACGGTGCCCTTCACGGCCCGCACCGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR CCA 90 bp GACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATTGCACCCACCCAATGTaGTTGGTCCTCAGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: DGHCGGLCLRGCRAGSADCTHPM*LVLREV
Trigger: GACCTCCCTGAGGACCAACCACATTGGGTGGGTGCA...ATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTTACGTGACAGAGCACTaGGCAAAGGCCAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: SGGGAARPAELRTTFLEPYVTEH*AKARYS
Trigger: CGAGTACCTGGCCTTTGCCCAGTGCTCTGTCACGTA...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp ACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCCAGCACCAGAGCCTTaGTTCTGGGGTTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TPTGTAAACVCADVGLVPPAPEP*FWGSCC
Trigger: ACAACAAGAACCCCAGAACCAAGGCTCTGGTGCTGG...CGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCCCAGCACAGCGTTCTTaGTCTCTGTGTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGPAQRS*SLCPPA
Trigger: TGCTGGAGGACACAGAGACCAAGAACGCTGTGCTGG...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGGTGCGAGATCTGGGCTaGGGGAGCCGGTCGGCACCC +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRVRDLG*GSRSAP
Trigger: GGGTGCCGACCGGCTCCCCCAGCCCAGATCTCGCAC...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGTTGCTGGGGGCCTTCTaGGCTGCCTTACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: GGGAARPAELRTTFLEPQLLGAF*AALLLR
Trigger: TCTCAAGAGTAAGGCAGCCCAGAAGGCCCCCAGCAA...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCTTGCTGGGGGCCTTCTaGGCTGCCTTACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGLLGAF*AALLLR
Trigger: TCTCAAGAGTAAGGCAGCCCAGAAGGCCCCCAGCAA...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GGGCTCCCCTTTGCCCGGGGTATCAGCGCCTGCCTCCTGGGCAGCGGCTTCTTTAAGTGCAGGTCGCTGTaGAAGCCTGTGAGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: GLPFARGISACLLGSGFFKCRSL*KPVSCG
Trigger: CCCGCAACTCACAGGCTTCCACAGCGACCTGCACTT...AAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCGGAGAAGAACAGGCCTaGGGATGTGGTCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGGEEQA*GCGLGV
Trigger: AACCCCAAGACCACATCCCCAGGCCTGTTCTTCTCC...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACGATGAGGTCCATCTGTaGCCGCCGGGCCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RFSSEMRSICGRRAFGGDDEVHL*PPGLWR
Trigger: CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATC...GTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000589911.1
CDS-3UTR CCA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGCGATGCTGCCCTCTGTaGCCAAGAGGAGGATGCACC +
Preference number: 4 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKRCCPL*PRGGCT
Trigger: GGTGCATCCTCCTCTTGGCCACAGAGGGCAGCATCG...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGCCTACCTTGGGTGCTaGGGGCTCCCCTTTGCCCGG +
Preference number: 4 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFAYLGC*GLPFAR
Trigger: CCGGGCAAAGGGGAGCCCCCAGCACCCAAGGTAGGC...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR TCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCGGGCTTGTTTTTCTCTaGGTTGGAAGCCCCGTTGTC +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGGLVFL*VGSPVV
Trigger: GACAACGGGGCTTCCAACTCAGAGAAAAACAAGCCC...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp TGTCCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCCCCGGTTGGCCTCAATaGGTGTCGCCTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: CPRPHTPAESTCRNSGYSPGWPQ*VSPCWG
Trigger: CCCCCAGCAAGGCGACACTCATTGAGGCCAACCGGG...GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp CGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACTGCCCTTCCGCAGGGTaGTGGCCAAGTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: RFSSEMRSICGRRAFGGDCPSAG*WPSSWP
Trigger: GGGCCAAGAACTTGGCCATCACCCTGCGGAAGGGCA...GTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGCATTCAGTTGCGGCATaGGCAGCTGGGCTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEEHSVAA*AAGLCP
Trigger: CGGACACAGCCCAGCTGCTCATGCCGCAACTGAATG...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GGCCACAGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTACATTGAGGCTGCAATaGTGGCATTCAGTTGCGGCA +
Preference number: 4 (lower is better)
Translates to: GHSGGGAARPAELRTTFLTLRLQ*WHSVAA
Trigger: TGCCGCAACTGAATGCCATCATTGCAGCCTCAATGT...AAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GGGCTCCCCTTTGCCCGGGGTATCAGCGCCTGCCTCCTGGGCAGCGGCTTCTTTCCCTCAGGAACTCCTTaGGCACCATGCAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: GLPFARGISACLLGSGFFPSGTP*APCSHP
Trigger: AGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGG...AAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTCCCTCAGGAACTCCTTaGGCACCATGCAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGAPSGTP*APCSHP
Trigger: AGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGG...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GGGCTCCCCTTTGCCCGGGGTATCAGCGCCTGCCTCCTGGGCAGCGGCTTCTTTGGTCGCTCTCATAAATaGGTGGCTCCTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLPFARGISACLLGSGFFGRSHK*VAPSAA
Trigger: GGCAGCAGAAGGAGCCACTCATTTATGAGAGCGACC...AAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp TTGCCGGTGCGGGCCGTGAAGGGCACCGTCTTGATCACTGAGTGGGGGTGGGGCGGTCGCTCTCATAAATaGGTGGCTCCTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LPVRAVKGTVLITEWGWGGRSHK*VAPSAA
Trigger: GGCAGCAGAAGGAGCCACTCATTTATGAGAGCGACC...GCCCCACCCCCACTCAGTGATCAAGACGGTGCCCTTCACGGCCCGCACCGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR TCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTCACCGTCTTGATCACTaGGTGGGGGTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGHRLDH*VGVGQV
Trigger: CACCTGCCCCACCCCCACTCAGTGATCAAGACGGTG...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR GCA 90 bp GGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGTTTTCAAAGCGGTGCTaGTCCCCACACACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GQEEDAPARLRRATAEEGFSKRC*SPHTSL
Trigger: CAAGGAGGTGTGTGGGGAGCAGCACCGCTTTGAAAA...CCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTTCCGGGAGCCGGCTCTaGTGCAGGTGCGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFSGSRL*CRCEIW
Trigger: CCAGATCTCGCACCTGCAGCAGAGCCGGCTCCCGGA...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCACCGGCCCGTCAGTaGCCGGAGGTGGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQAPARQ*PEVVAV
Trigger: CACCGCCACCACCTCCGGGCACTGACGGGCCGGTGC...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp CGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACTCCTCCATTGGCCGCTaGTCCCGCTCAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: RFSSEMRSICGRRAFGGDSSIGR*SRSKRV
Trigger: CACCCGCTTTGAGCGGGAGCAGCGGCCAATGGAGGA...GTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp GAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACTTGGGTGCTGGGGCCTTGTCCAGGAAGTaGAGGTCGCTGTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: EMRSICGRRAFGGDLGAGALSRK*RSLWKP
Trigger: AGGCTTCCACAGCGACCTGCACTTCCTGGACAAGGC...CCCAGCACCCAAGTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp TGTCCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCAACTCTAGGCCTCGCTaGAGGGAGCGCACGTCCGCC +
Preference number: 4 (lower is better)
Translates to: CPRPHTPAESTCRNSGYSNSRPR*RERTSA
Trigger: GGCGGACGTGCGCTCCCTGCAGCGAGGCCTAGAGTT...GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGCCTCCTGAGCCGTCTTaGTGTCTGCCAGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKPPEPS*CLPAAC
Trigger: ACAAGCTGCTGGCAGACAGCAAGACGGCTCAGGAGG...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp TTGCCGGTGCGGGCCGTGAAGGGCACCGTCTTGATCACTGAGTGGGGGTGGGGCAGTGGCTCCTTCTGCTaGCTCCGTTTCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LPVRAVKGTVLITEWGWGSGSFC*LRFSSE
Trigger: CTCTGAGCTGAAACGGAGGCAGCAGAAGGAGCCACT...GCCCCACCCCCACTCAGTGATCAAGACGGTGCCCTTCACGGCCCGCACCGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR GCA 90 bp GGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGATGAGTGGCTCCTTCTaGTGCCTCCGTTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GQEEDAPARLRRATAEEGMSGSF*CLRFSS
Trigger: TGAGCTGAAACGGAGGCAGCAGAAGGAGCCACTCAT...CCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGCTTGATGGTCAGGTaGCGGCTTTTGGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKSLMVR*RLLGTE
Trigger: CTCCGTGCCCAAAAGCCGCCACCTGACCATCAAGCT...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGCTTCCTGCTGTGGGCTaGGGTCAGCTTGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKLPAVG*GQLDGQ
Trigger: CTGACCATCAAGCTGACCCCAGCCCACAGCAGGAAG...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGAGGGCCTTCCTGCTGTaGGCTGGGGTCAGCTTGATG +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEERAFLL*AGVSLM
Trigger: CATCAAGCTGACCCCAGCCCACAGCAGGAAGGCCCT...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp GGCCACAGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTCTCATTGACACAGGCTaGGTGGTTCATGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: GHSGGGAARPAELRTTFLLIDTG*VVHDKA
Trigger: AGCCTTGTCATGAACCACCCAGCCTGTGTCAATGAG...AAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp CCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGTCGGAGGTGACCTGCAGGTGCGAGATCTaGGCTGGGGGAGCCGGTCGG +
Preference number: 4 (lower is better)
Translates to: PAESTCRNSGYSERSEVTCRCEI*AGGAGR
Trigger: CCGACCGGCTCCCCCAGCCCAGATCTCGCACCTGCA...GGTCACCTCCGACCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp CCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGTACGCCTCAATGGCTTaGCAGATGCGCTCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PRPHTPAESTCRNSGYSEYASMA*QMRSAP
Trigger: GGGGGCCGAGCGCATCTGCCAAGCCATTGAGGCGTA...CTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGTGCGGCATGAGCAGCTaGGCTGTGTCCGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEECGMSS*AVSGKL
Trigger: CAACTTCCCGGACACAGCCCAGCTGCTCATGCCGCA...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCTGGGGATGTGGTCTTaGGGTTCTCTCCGAAGTACT +
Preference number: 4 (lower is better)
Translates to: SGGGAARPAELRTTFLEPLGMWS*GSLRST
Trigger: AGTACTTCGGAGAGAACCCCAAGACCACATCCCCAG...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCTGTGATGATGTCGATGAGGTCCATCTGTaGCCGCCGGGCCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: AACVCADVGLVPQICDDVDEVHL*PPGLWR
Trigger: CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATC...GACATCATCACAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGCTCAAAGGCCTCCTGTaGGCACAGCCTGAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRLKGLL*AQPEPS
Trigger: AGACGGCTCAGGCTGTGCCCACAGGAGGCCTTTGAG...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp GACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATGCTCCTGATCACAGATaGGCTCCCACTTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: DGHCGGLCLRGCRAGSADAPDHR*APTSSR
Trigger: ACGAGAAGAAGTGGGAGCTCATCTGTGATCAGGAGC...ATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp CCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGCGTCGTCCTTCTGGCTaGCGATGCGGGAATTCCGCA +
Preference number: 4 (lower is better)
Translates to: PRPHTPAESTCRNSGYSERRPSG*RCGNSA
Trigger: TGCGGAATTCCCGCATCGTCAGCCAGAAGGACGACG...CTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTCCCCACACACCTCCTTaGAGTTGTCAAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGAPHTPP*SCQRLQ
Trigger: TTGCAGCCTTTGACAACTTCAAGGAGGTGTGTGGGG...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp CCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGTCGGAGGTGACCTGGCGGTCGATTCGCTaGAGCGCTCCCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PAESTCRNSGYSERSEVTWRSIR*SAPAGS
Trigger: AGACCCTGCGGGAGCGCTTCAGCGAATCGACCGCCA...GGTCACCTCCGACCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTAGTTGCCCAGGAAGGTaGGTGTGGTCATGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGSCPGR*VWSCAP
Trigger: CGGAGCGCATGACCACACTCACCTTCCTGGGCAACT...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGCCGGGCCTTTGGCGGTaGCTAGGGGGAATTTATAGC +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRPGLWR*LGGIYS
Trigger: GCTATAAATTCCCCCTAGTCACCGCCAAAGGCCCGG...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR GCA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTCAATGGCTTGGCAGATaGGCTCGGCCCCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFQWLGR*ARPPGC
Trigger: GCAACCTGGGGGCCGAGCGCATCTGCCAAGCCATTG...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTTCCAGGCCCAGAGCCTaGAGGTCGTACGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGSRPRA*RSYASM
Trigger: CATTGAGGCGTACGACCTGCAGGCTCTGGGCCTGGA...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp GACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATGCAGCAGCGTCTGCTTaGGATCAGTCGACTTCATCT +
Preference number: 4 (lower is better)
Translates to: DGHCGGLCLRGCRAGSADAAASA*DQSTSS
Trigger: AGATGAAGTCGACTGATCGCAAGCAGACGCTGCTGC...ATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR GCA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGTGGAAGCCTGTGAGTTaGGGGTACTTCTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: GGGAARPAELRTTFLEPQWKPVS*GYFSAM
Trigger: CATTGCTGAGAAGTACCCGCAACTCACAGGCTTCCA...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCACCATGCAGTCATCCTaGCGCACAAACTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGTMQSS*RTNSLC
Trigger: ACAGAGAGAGTTTGTGCGGCAGGATGACTGCATGGT...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACCCTGCAGAATCCACCTaGAGAAATAGCGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: AARPAELRTTFLEPQPVHPAEST*RNSGYS
Trigger: GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGG...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGTTGACACAGGCTGGGTaGTTCATGACAAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GQEEDAPARLRRATAEEGLTQAG*FMTRLK
Trigger: CTTCAGCCTTGTCATGAACCACCCAGCCTGTGTCAA...CCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCAGTTCTGCAATCTTaGCCATGGATTCGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: GGGAARPAELRTTFLEPQPVLQS*PWIRSP
Trigger: CGGAGAACGAATCCATGGCCAAGATTGCAGAACTGG...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTTACGCCTCAATGGCTTaGCAGATGCGCTCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFYASMA*QMRSAP
Trigger: GGGGGCCGAGCGCATCTGCCAAGCCATTGAGGCGTA...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp CCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGGGTCGTACGCCTCAATaGCTTGGCAGATGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: PRPHTPAESTCRNSGYSEGRTPQ*LGRCAR
Trigger: CCGAGCGCATCTGCCAAGCCATTGAGGCGTACGACC...CTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCACAATCTCCAGGATCTaGCGGAGTTTGTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GAARPAELRTTFLEPQPVTISRI*RSLSED
Trigger: GTCCTCTGACAAACTCCGCCAGATCCTGGAGATTGT...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGCAGCTTGTCCATGGTaGGCGAGTTGGCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGAACPW*ASWPSG
Trigger: TCCTGAGGGCCAACTCGCCCACCATGGACAAGCTGC...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000589911.1
CDS-3UTR CCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTCCAGCAGCTTGTCCATaGTGGGCGAGTTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGPAACP*WASWPS
Trigger: TGAGGGCCAACTCGCCCACCATGGACAAGCTGCTGG...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000589911.1
CDS-3UTR CCA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACCTGGGGATGTGGTCTTaGGGTTCTCTCCGAAGTACT +
Preference number: 4 (lower is better)
Translates to: AARPAELRTTFLEPQPVHLGMWS*GSLRST
Trigger: AGTACTTCGGAGAGAACCCCAAGACCACATCCCCAG...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGGGAGAAGAACAGGCCTaGGGATGTGGTCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKGEEQA*GCGLGV
Trigger: AACCCCAAGACCACATCCCCAGGCCTGTTCTTCTCC...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGTCGGAGGTGACCGATGAGGTCCATCTGTaGCCGCCGGGCCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PAESTCRNSGYSERSEVTDEVHL*PPGLWR
Trigger: CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATC...GGTCACCTCCGACCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp GGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGGGACTTGATGGACATTaGGGCTGCAATGATGGCATT +
Preference number: 4 (lower is better)
Translates to: GQEEDAPARLRRATAEEGGLDGH*GCNDGI
Trigger: AATGCCATCATTGCAGCCTCAATGTCCATCAAGTCC...CCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTGTTTGTCAGAGGACTTaGTGGACATTGAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SGGGAARPAELRTTFLEPVCQRT*WTLRLQ
Trigger: TTGCAGCCTCAATGTCCATCAAGTCCTCTGACAAAC...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GGGCTCCCCTTTGCCCGGGGTATCAGCGCCTGCCTCCTGGGCAGCGGCTTCTTTGGTACTTCTCAGCAATaGCCTTCACCAGGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: GLPFARGISACLLGSGFFGTSQQ*PSPGSA
Trigger: TGCACTACCTGGTGAAGGTCATTGCTGAGAAGTACC...AAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp CCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGTCGGAGGTGACCGAGGACCACCTTCCTTaGGCCTCAGCCTGTCCACGG +
Preference number: 4 (lower is better)
Translates to: PAESTCRNSGYSERSEVTEDHLP*ASACPR
Trigger: CCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTC...GGTCACCTCCGACCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGGGACATCCAATCAGCTaGTACCTTTCGGCTGACCCC +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEEGHPIS*YLSADP
Trigger: GGGGTCAGCCGAAAGGTAGCAGCTGATTGGATGTCC...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp CGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACCCGGAAGCCATAGGCTaGCCCACGCTTGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: RFSSEMRSICGRRAFGGDPEAIG*PTLATV
Trigger: AACAGTAGCAAGCGTGGGGCAGCCTATGGCTTCCGG...GTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp CCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGCCTCCTGAGCCGTCTTaGTGTCTGCCAGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PRPHTPAESTCRNSGYSEPPEPS*CLPAAC
Trigger: ACAAGCTGCTGGCAGACAGCAAGACGGCTCAGGAGG...CTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGCCAGCACAGCGTTCTTaGTCTCTGTGTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRPAQRS*SLCPPA
Trigger: TGCTGGAGGACACAGAGACCAAGAACGCTGTGCTGG...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp CGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACTCTGGATGGGCTTCTTaGCCTTCACTCCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RFSSEMRSICGRRAFGGDSGWAS*PSLLGP
Trigger: TGGGCCCAGGAGTGAAGGCCAAGAAGCCCATCCAGA...GTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACCCAGTTCAAGAGTaGCATTCGGAACTTAGTCTG +
Preference number: 4 (lower is better)
Translates to: GAARPAELRTTFLEPQPVHPVQE*HSELSL
Trigger: CAGACTAAGTTCCGAATGCCACTCTTGAACTGGGTG...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATGTTTGTCAGAGGACTTaGTGGACATTGAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: DGHCGGLCLRGCRAGSADVCQRT*WTLRLQ
Trigger: TTGCAGCCTCAATGTCCATCAAGTCCTCTGACAAAC...ATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR TCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGCAAGGACAGCTGGCTTaGGCAGAAAGAACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRQGQLA*AERTLS
Trigger: GGAAAGGGTTCTTTCTGCTCAAGCCAGCTGTCCTTG...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR GCA 90 bp GAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCAGGGAGCCGGCTCTGCTaGAGGTGCGAGATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EAKYGYLEGALGWVLQAAGSRLC*RCEIWA
Trigger: AGCCCAGATCTCGCACCTGCAGCAGAGCCGGCTCCC...TGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATCCGGGAGCCGGCTCTaGTGCAGGTGCGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: EAKYGYLEGALGWVLQAASGSRL*CRCEIW
Trigger: CCAGATCTCGCACCTGCAGCAGAGCCGGCTCCCGGA...TGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTAGTGGCTCCTTCTGCTaGCTCCGTTTCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGSGSFC*LRFSSE
Trigger: CTCTGAGCTGAAACGGAGGCAGCAGAAGGAGCCACT...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000589911.1
CDS-3UTR GCA 90 bp CGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGAGTGGCTCCTTCTGCTaGCTCCGTTTCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RPHTPAESTCRNSGYSERSGSFC*LRFSSE
Trigger: CTCTGAGCTGAAACGGAGGCAGCAGAAGGAGCCACT...CCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGATGAGTGGCTCCTTCTaGTGCCTCCGTTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRMSGSF*CLRFSS
Trigger: TGAGCTGAAACGGAGGCAGCAGAAGGAGCCACTCAT...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000589911.1
CDS-3UTR GCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGATGAGTGGCTCCTTCTaGTGCCTCCGTTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEEMSGSF*CLRFSS
Trigger: TGAGCTGAAACGGAGGCAGCAGAAGGAGCCACTCAT...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGCCTGCAGAATCCACCTaGAGAAATAGCGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEEPAEST*RNSGYS
Trigger: GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGG...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGGTGATGAGATGCCATaGATCCCTGCAGCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGGDEMP*IPAAQY
Trigger: GTACTGGGCTGCAGGGATGCATGGCATCTCATCACC...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR GCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGAAACCCTGGAATATCTaGCTGGTCCCCCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRKPWNI*LVPHSK
Trigger: CTTGCTGTGGGGGACCAGGCAGATATTCCAGGGTTT...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR CCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGAGGTCCAGGCCCAAGTaGGTGAACTCATATTGCAGG +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRRSRPK*VNSYCR
Trigger: CCTGCAATATGAGTTCACCCACTTGGGCCTGGACCT...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTATTCGGAACTTAGTCTaGATGGGCTTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGAIRNLV*MGFLAF
Trigger: GAAGGCCAAGAAGCCCATCCAGACTAAGTTCCGAAT...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACTTGCTGGGGGCCTTCTaGGCTGCCTTACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: RFSSEMRSICGRRAFGGDLLGAF*AALLLR
Trigger: TCTCAAGAGTAAGGCAGCCCAGAAGGCCCCCAGCAA...GTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGGCAGCTTGTCCATGGTaGGCGAGTTGGCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRAACPW*ASWPSG
Trigger: TCCTGAGGGCCAACTCGCCCACCATGGACAAGCTGC...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACCCTGGAATATCTGCCTaGTCCCCCACAGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: RFSSEMRSICGRRAFGGDPGISA*SPTART
Trigger: TGTCCTTGCTGTGGGGGACCAGGCAGATATTCCAGG...GTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR TCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGACCTGCGTGGACTCCTaGACTCGCCTCTTAAACCCC +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRTCVDS*TRLLNP
Trigger: GGGGTTTAAGAGGCGAGTTCAGGAGTCCACGCAGGT...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp TGTCCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCCAAAGGCTGCAAGGATaGTGTCATGTCCTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: CPRPHTPAESTCRNSGYSQRLQG*CHVLPA
Trigger: TGCGGGGAGGACATGACATCATCCTTGCAGCCTTTG...GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTCTTGGGACTTGGTCTTaGACTGTTCCTCAAAATCAC +
Preference number: 4 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGALGTWS*TVPQNH
Trigger: GTGATTTTGAGGAACAGTTCAAGACCAAGTCCCAAG...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATGCCCTTCCGCAGGGTaGTGGCCAAGTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: EAKYGYLEGALGWVLQAACPSAG*WPSSWP
Trigger: GGGCCAAGAACTTGGCCATCACCCTGCGGAAGGGCA...TGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGGGACTTGATGGACATTaGGGCTGCAATGATGGCATT +
Preference number: 4 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKGLDGH*GCNDGI
Trigger: AATGCCATCATTGCAGCCTCAATGTCCATCAAGTCC...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGGGTACTTCTCAGCAATaGCCTTCACCAGGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEEGTSQQ*PSPGSA
Trigger: TGCACTACCTGGTGAAGGTCATTGCTGAGAAGTACC...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp CCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGTCGGAGGTGACCCGCTGTGGAAGCCTGTaGGTTGCGGGTACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PAESTCRNSGYSERSEVTRCGSL*VAGTSQ
Trigger: CTGAGAAGTACCCGCAACTCACAGGCTTCCACAGCG...GGTCACCTCCGACCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTCCCTCAGGAACTCCTTaGGCACCATGCAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFPSGTP*APCSHP
Trigger: AGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGG...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000589911.1
CDS-3UTR TCA 90 bp GAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCAGAGGACCACCTTCCTTaGGCCTCAGCCTGTCCACGG +
Preference number: 4 (lower is better)
Translates to: EAKYGYLEGALGWVLQAAEDHLP*ASACPR
Trigger: CCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTC...TGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGTCATTGAGGAACTCCTaGACCCACCCAATGTGGTTG +
Preference number: 4 (lower is better)
Translates to: KQHLGEGAGDAALCGQEESLRNS*THPMWL
Trigger: CAACCACATTGGGTGGGTGCAGGAGTTCCTCAATGA...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTTGCAGTTCCTCCATGTaGTCCAGCACAGCGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGCSSSM*SSTAFL
Trigger: CAAGAACGCTGTGCTGGAGCACATGGAGGAACTGCA...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGACCATGCAGTCATCCTaGCGCACAAACTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRTMQSS*RTNSLC
Trigger: ACAGAGAGAGTTTGTGCGGCAGGATGACTGCATGGT...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTCTTTCTGAGCCGTCTTaGTGTCTGCCAGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGLSEPS*CLPAAC
Trigger: ACAAGCTGCTGGCAGACAGCAAGACGGCTCAGAAAG...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR CCA 90 bp TGTCCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCCTGCAATCTTGGCCATaGATTCGTTCTCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: CPRPHTPAESTCRNSGYSLQSWP*IRSPRP
Trigger: GGGACGCGGAGAACGAATCCATGGCCAAGATTGCAG...GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp GAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACTTGGGTGCTGGGCACCCAGTTCAAGAGTaGCATTCGGAACTTAGTCTG +
Preference number: 4 (lower is better)
Translates to: EMRSICGRRAFGGDLGAGHPVQE*HSELSL
Trigger: CAGACTAAGTTCCGAATGCCACTCTTGAACTGGGTG...CCCAGCACCCAAGTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAATACGCCTCAATGGCTTaGCAGATGCGCTCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQYASMA*QMRSAP
Trigger: GGGGGCCGAGCGCATCTGCCAAGCCATTGAGGCGTA...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCTGTGATGATGTCGGAGAAGAACAGGCCTaGGGATGTGGTCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: AACVCADVGLVPQICDDVGEEQA*GCGLGV
Trigger: AACCCCAAGACCACATCCCCAGGCCTGTTCTTCTCC...GACATCATCACAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp CCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGTCAGAGCAATCTCATTaGCACAGGCTGGGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PRPHTPAESTCRNSGYSESEQSH*HRLGGS
Trigger: TGAACCACCCAGCCTGTGTCAATGAGATTGCTCTGA...CTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTCCAGGCCCAAGTGGGTaGACTCATATTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFPGPSG*THIAGR
Trigger: TCTTCCTGCAATATGAGTTCACCCACTTGGGCCTGG...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAAGTTGCCCAGGAAGGTaGGTGTGGTCATGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQSCPGR*VWSCAP
Trigger: CGGAGCGCATGACCACACTCACCTTCCTGGGCAACT...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGGGTCGCTCTCATAAATaGGTGGCTCCTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRGRSHK*VAPSAA
Trigger: GGCAGCAGAAGGAGCCACTCATTTATGAGAGCGACC...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTAGGCTGCCCCACGCTTaGTACTGTTCATGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFRLPHA*YCSCSC
Trigger: GCAACTACATGAACAGTAGCAAGCGTGGGGCAGCCT...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGAGTGGCTCCTTCTGCTaGCTCCGTTTCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRSGSFC*LRFSSE
Trigger: CTCTGAGCTGAAACGGAGGCAGCAGAAGGAGCCACT...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTAACTCCTTGCGCGCCTaGCTTAGCTGTTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGNSLRA*LSCFSS
Trigger: ACTGGAAAAACAGCTAAGCCAGGCGCGCAAGGAGTT...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp CTCCTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAAGTGCGAGATCTGGGCTaGGGGAGCCGGTCGGCACCC +
Preference number: 4 (lower is better)
Translates to: LLLSFLVGLNEAAKEGEEVRDLG*GSRSAP
Trigger: GGGTGCCGACCGGCTCCCCCAGCCCAGATCTCGCAC...TTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp TGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGCACCCAGTTCAAGAGTaGCATTCGGAACTTAGTCTG +
Preference number: 4 (lower is better)
Translates to: CKQHLGEGAGDAALCGQEHPVQE*HSELSL
Trigger: CAGACTAAGTTCCGAATGCCACTCTTGAACTGGGTG...CTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAACCAGCAGCTTGTCCATaGTGGGCGAGTTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQPAACP*WASWPS
Trigger: TGAGGGCCAACTCGCCCACCATGGACAAGCTGCTGG...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAACGATGCTGCCCTCTGTaGCCAAGAGGAGGATGCACC +
Preference number: 4 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQRCCPL*PRGGCT
Trigger: GGTGCATCCTCCTCTTGGCCACAGAGGGCAGCATCG...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GTGTGGCAGCCAGTCCCCCAGAGGATAGCGCATTGGGTCAGAAGAAAGCATAGAAGCAGTTGCCTACCTTaGGTGCTGGGGGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: VWQPVPQRIAHWVRRKHRSSCLP*VLGAPL
Trigger: AAGGGGAGCCCCCAGCACCCAAGGTAGGCAACTGCT...TCTATGCTTTCTTCTGACCCAATGCGCTATCCTCTGGGGGACTGGCTGCCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR CCA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTCCATCACCAAAACCCTaGAATATCTGCCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFPSPKP*NICLVP
Trigger: GGGGACCAGGCAGATATTCCAGGGTTTTGGTGATGG...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR TCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGTCTCCATGTCATACGTaGCAGAGCACTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRSPCHT*QSTGQR
Trigger: CCTTTGCCCAGTGCTCTGTCACGTATGACATGGAGA...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGGACTTGATGGACATTaGGGCTGCAATGATGGCATT +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGGLDGH*GCNDGI
Trigger: AATGCCATCATTGCAGCCTCAATGTCCATCAAGTCC...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp TGTCCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGGTACTTCTCAGCAATaGCCTTCACCAGGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: CPRPHTPAESTCRNSGYSGTSQQ*PSPGSA
Trigger: TGCACTACCTGGTGAAGGTCATTGCTGAGAAGTACC...GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp GTGTGGCAGCCAGTCCCCCAGAGGATAGCGCATTGGGTCAGAAGAAAGCATAGAGTTTCAGCTCAGAGATaGGGTCCATCTGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VWQPVPQRIAHWVRRKHRVSAQR*GPSVAA
Trigger: GGCGGCCACAGATGGACCTCATCTCTGAGCTGAAAC...TCTATGCTTTCTTCTGACCCAATGCGCTATCCTCTGGGGGACTGGCTGCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR GCA 90 bp CCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGTCGGAGGTGACCAGGCTGCCCCACGCTTaGTACTGTTCATGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: PAESTCRNSGYSERSEVTRLPHA*YCSCSC
Trigger: GCAACTACATGAACAGTAGCAAGCGTGGGGCAGCCT...GGTCACCTCCGACCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp GAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCACCGGAAGCCATAGGCTaGCCCACGCTTGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: EAKYGYLEGALGWVLQAAPEAIG*PTLATV
Trigger: AACAGTAGCAAGCGTGGGGCAGCCTATGGCTTCCGG...TGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGGCAGCAGCGTCTGCTTaGGATCAGTCGACTTCATCT +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRAAASA*DQSTSS
Trigger: AGATGAAGTCGACTGATCGCAAGCAGACGCTGCTGC...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp GTGTGGCAGCCAGTCCCCCAGAGGATAGCGCATTGGGTCAGAAGAAAGCATAGAGATGCCATGCATCCCTaGAGCCCAGTACCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VWQPVPQRIAHWVRRKHRDAMHP*SPVPSP
Trigger: TGGGCTTGGTACTGGGCTGCAGGGATGCATGGCATC...TCTATGCTTTCTTCTGACCCAATGCGCTATCCTCTGGGGGACTGGCTGCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR CCA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAAAGTGCAGGTCGCTGTaGAAGCCTGTGAGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQKCRSL*KPVSCG
Trigger: CCCGCAACTCACAGGCTTCCACAGCGACCTGCACTT...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp CTCCTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAATGGCGGTCGATTCGCTaGAGCGCTCCCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LLLSFLVGLNEAAKEGEEWRSIR*SAPAGS
Trigger: AGACCCTGCGGGAGCGCTTCAGCGAATCGACCGCCA...TTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp CGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACCTTGGGACTTGGTCTTaGACTGTTCCTCAAAATCAC +
Preference number: 4 (lower is better)
Translates to: RFSSEMRSICGRRAFGGDLGTWS*TVPQNH
Trigger: GTGATTTTGAGGAACAGTTCAAGACCAAGTCCCAAG...GTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGGTCGCTCTCATAAATaGGTGGCTCCTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQGRSHK*VAPSAA
Trigger: GGCAGCAGAAGGAGCCACTCATTTATGAGAGCGACC...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR GCA 90 bp CGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGTGGGTGAACTCATATTaGAGGAAGACACGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RPHTPAESTCRNSGYSERWVNSY*RKTRKF
Trigger: GAACTTCCGTGTCTTCCTGCAATATGAGTTCACCCA...CCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp CTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAACAGGGGAGCCGGCTCTGCTaGAGGTGCGAGATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSFLVGLNEAAKEGEEQGSRLC*RCEIWA
Trigger: AGCCCAGATCTCGCACCTGCAGCAGAGCCGGCTCCC...CTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAACTGCAATCTTGGCCATaGATTCGTTCTCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQLQSWP*IRSPRP
Trigger: GGGACGCGGAGAACGAATCCATGGCCAAGATTGCAG...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGCCAGTTCTGCAATCTTaGCCATGGATTCGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRPVLQS*PWIRSP
Trigger: CGGAGAACGAATCCATGGCCAAGATTGCAGAACTGG...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGAACTCCTTGCGCGCCTaGCTTAGCTGTTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRNSLRA*LSCFSS
Trigger: ACTGGAAAAACAGCTAAGCCAGGCGCGCAAGGAGTT...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp TGTCCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCATTCGGAACTTAGTCTaGATGGGCTTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: CPRPHTPAESTCRNSGYSIRNLV*MGFLAF
Trigger: GAAGGCCAAGAAGCCCATCCAGACTAAGTTCCGAAT...GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGACAATCTCCAGGATCTaGCGGAGTTTGTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRTISRI*RSLSED
Trigger: GTCCTCTGACAAACTCCGCCAGATCCTGGAGATTGT...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTCAGAGGATAGCGCATTaGGTCAGAAGAAAGCATAGA +
Preference number: 4 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGQRIAH*VRRKHR
Trigger: TCTATGCTTTCTTCTGACCCAATGCGCTATCCTCTG...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR GCA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTTGGGTGAACTCATATTaGAGGAAGACACGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFWVNSY*RKTRKF
Trigger: GAACTTCCGTGTCTTCCTGCAATATGAGTTCACCCA...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGTGTTTTTCTCTGAGTTaGAAGCCCCGTTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRCFSLS*KPRCLC
Trigger: GCACAGACAACGGGGCTTCCAACTCAGAGAAAAACA...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CCA 90 bp GAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCAAGGTCCAGGCCCAAGTaGGTGAACTCATATTGCAGG +
Preference number: 4 (lower is better)
Translates to: EAKYGYLEGALGWVLQAARSRPK*VNSYCR
Trigger: CCTGCAATATGAGTTCACCCACTTGGGCCTGGACCT...TGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp CCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGTCGGAGGTGACCCTTGGGACTTGGTCTTaGACTGTTCCTCAAAATCAC +
Preference number: 4 (lower is better)
Translates to: PAESTCRNSGYSERSEVTLGTWS*TVPQNH
Trigger: GTGATTTTGAGGAACAGTTCAAGACCAAGTCCCAAG...GGTCACCTCCGACCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp GAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCAACATTGAGGCTGCAATaGTGGCATTCAGTTGCGGCA +
Preference number: 4 (lower is better)
Translates to: EAKYGYLEGALGWVLQAATLRLQ*WHSVAA
Trigger: TGCCGCAACTGAATGCCATCATTGCAGCCTCAATGT...TGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR TCA 90 bp TTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAACAGGCCTGGGGACGCTGTGGAAGCCTGTaGGTTGCGGGTACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: FLVGLNEAAKEGEEQAWGRCGSL*VAGTSQ
Trigger: CTGAGAAGTACCCGCAACTCACAGGCTTCCACAGCG...TCCCCAGGCCTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp AGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAACAGGCCTGGGTTTCAGCTCAGAGATaGGGTCCATCTGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SFLVGLNEAAKEGEEQAWVSAQR*GPSVAA
Trigger: GGCGGCCACAGATGGACCTCATCTCTGAGCTGAAAC...CCAGGCCTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAAGGTCTTCCACAGACTaGTCCAGGGGCTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQRSSTD*SRGLFF
Trigger: GAAAAACAAGCCCCTGGAGCAGTCTGTGGAAGACCT...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR GCA 90 bp AGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAACAGGCCTGGGTCAGCAGCGCCACTTaGTCCTGCAGTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: SFLVGLNEAAKEGEEQAWVSSAT*SCSSSM
Trigger: CATGGAGGAACTGCAGGAGCAAGTGGCGCTGCTGAC...CCAGGCCTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp CTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAACAGGGGGGCCTTCTGGGCTaGCTTACTCTTGAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LLSFLVGLNEAAKEGEEQGGLLG*LTLESA
Trigger: AGCGCTCTCAAGAGTAAGGCAGCCCAGAAGGCCCCC...CTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp AGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAACAGGCCTGGCAGCCTGAGCCGTCTTaGTGTCTGCCAGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: SFLVGLNEAAKEGEEQAWQPEPS*CLPAAC
Trigger: ACAAGCTGCTGGCAGACAGCAAGACGGCTCAGGCTG...CCAGGCCTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAAACTCCTTGCGCGCCTaGCTTAGCTGTTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQNSLRA*LSCFSS
Trigger: ACTGGAAAAACAGCTAAGCCAGGCGCGCAAGGAGTT...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CCA 90 bp CTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAACAGGGTCGTACGCCTCAATaGCTTGGCAGATGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: LLSFLVGLNEAAKEGEEQGRTPQ*LGRCAR
Trigger: CCGAGCGCATCTGCCAAGCCATTGAGGCGTACGACC...CTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp CTCCTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAATGCGGCATGAGCAGCTaGGCTGTGTCCGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LLLSFLVGLNEAAKEGEECGMSS*AVSGKL
Trigger: CAACTTCCCGGACACAGCCCAGCTGCTCATGCCGCA...TTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp CTCCTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAACCAGCAGCTTGTCCATaGTGGGCGAGTTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLLSFLVGLNEAAKEGEEPAACP*WASWPS
Trigger: TGAGGGCCAACTCGCCCACCATGGACAAGCTGCTGG...TTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp CTCCTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAAGGGTCTCCAACTCCTTaGGCGCCTGGCTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLLSFLVGLNEAAKEGEEGSPTP*APGLAV
Trigger: AACAGCTAAGCCAGGCGCGCAAGGAGTTGGAGACCC...TTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp CTCCTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAAGCATGCAGGCCACCATaGAGTCGATGTTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LLLSFLVGLNEAAKEGEEACRPP*SRCCCP
Trigger: AGGACAGCAACATCGACTTCATGGTGGCCTGCATGC...TTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR GCA 90 bp GAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCAGAAGTTGTCAAAGGCTaGAAGGATGATGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: EAKYGYLEGALGWVLQAAEVVKG*KDDVMS
Trigger: GGACATGACATCATCCTTGCAGCCTTTGACAACTTC...TGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR TCA 90 bp TTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAACAGGCCTGGGGAACATTGAGGCTGCAATaGTGGCATTCAGTTGCGGCA +
Preference number: 4 (lower is better)
Translates to: FLVGLNEAAKEGEEQAWGTLRLQ*WHSVAA
Trigger: TGCCGCAACTGAATGCCATCATTGCAGCCTCAATGT...TCCCCAGGCCTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CCA 90 bp TTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAACAGGCCTGGGGAATTCGGAACTTAGTCTaGATGGGCTTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: FLVGLNEAAKEGEEQAWGIRNLV*MGFLAF
Trigger: GAAGGCCAAGAAGCCCATCCAGACTAAGTTCCGAAT...TCCCCAGGCCTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR TCA 90 bp CTCCTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAAGTTTGTCAGAGGACTTaGTGGACATTGAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LLLSFLVGLNEAAKEGEEVCQRT*WTLRLQ
Trigger: TTGCAGCCTCAATGTCCATCAAGTCCTCTGACAAAC...TTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS GCA 90 bp GGCATCAGGAGGACCTCCGGGAGGCGGCGGCGGCGGCGGTGGCGCTaGTCCGGGAGCCGGCTCTGCTGCAGGTGCGAGATCTGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GIRRTSGRRRRRRWR*SGSRLCCRCEIWAG
Trigger: CCCAGCCCAGATCTCGCACCTGCAGCAGAGCCGGCTCCCGGAGCAGCGCCACCGCCGCCGCCGCCGCCTCCCGGAGGTCCTCCTGATGCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS TCA 90 bp CGGTGGCGCTGCTCCGGGAGCCGGCTCTGCTGCAGGTGCGAGATCTaGGCCAGCGAGGGCGCGGCGTGGGGGAGGCGCGAGTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: RWRCSGSRLCCRCEI*ASEGAAWGRRESAP
Trigger: AGGAGCTGACTCGCGCCTCCCCCACGCCGCGCCCTCGCTGGCTCAGATCTCGCACCTGCAGCAGAGCCGGCTCCCGGAGCAGCGCCACCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS-3UTR CAA 90 bp GGCCACAGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGCGCTGCCGGCCGCGTaGCCCATGGTGGTCCCCACC +
Preference number: 5 (lower is better)
Translates to: GHSGGGAARPAELRTTFLALPAA*PMVVPT
Trigger: GGTGGGGACCACCATGGGCAACGCGGCCGGCAGCGC...AAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTGTGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS GCA 90 bp CGCAGCCCGGCACTGGCACCGCCGGTGAGGGGGCGGCATCAGGCATaGCTGCCTGGAAGACTGGGGGAGGCTCCCAGATCCGCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: RSPALAPPVRGRHQA*LPGRLGEAPRSAQP
Trigger: GGGCTGAGCGGATCTGGGAGCCTCCCCCAGTCTTCCAGGCAGGCATGCCTGATGCCGCCCCCTCACCGGCGGTGCCAGTGCCGGGCTGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS TCA 90 bp TCCGCGTCCCGAAGCCGCTCTGTCAGCTGTAGCACCAGCACATGGTaGGCCCCGACCCGCAGCCCGGCACTGGCACCGCCGGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: SASRSRSVSCSTSTW*APTRSPALAPPVRG
Trigger: CCCCCTCACCGGCGGTGCCAGTGCCGGGCTGCGGGTCGGGGCTCACCATGTGCTGGTGCTACAGCTGACAGAGCGGCTTCGGGACGCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS-3UTR CAA 90 bp ACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCACCGCCGCTCGGAGTaGCCACAGCGACGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: TPTGTAAACVCADVGLVPHRRSE*PQRRGG
Trigger: TCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCGGTG...CGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS GCA 90 bp GCTGGGAGTTGCCTCCTGCCCATCCCCTCCCAAGTCACACCGCCCTaGCCGCTCCGCCCACACCGGCATGAGCAGCTGGGCTGTGTCCGG +
Preference number: 5 (lower is better)
Translates to: AGSCLLPIPSQVTPP*PLRPHRHEQLGCVR
Trigger: CCGGACACAGCCCAGCTGCTCATGCCGGTGTGGGCGGAGCGGGCAGGGCGGTGTGACTTGGGAGGGGATGGGCAGGAGGCAACTCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 90 bp GGCACTGGCACCGCCGGTGAGGGGGCGGCATCAGGCATGCCTGCCTaGAAGACTGGGGGAGGCTCCCAGATCCGCTCAGCCCAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: GTGTAGEGAASGMPA*KTGGGSQIRSAQVP
Trigger: TGGCACCTGGGCTGAGCGGATCTGGGAGCCTCCCCCAGTCTTCCAGGCAGGCATGCCTGATGCCGCCCCCTCACCGGCGGTGCCAGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 90 bp CAGCGAGGGCGCGGCGTGGGGGAGGCGCGAGTCAGCTCCTTGACTTaGGTGGGCCCCTCTCCGCCTCTCCGCTCTACGCATGCGCTCCTA +
Preference number: 5 (lower is better)
Translates to: QRGRGVGEARVSSLT*VGPSPPLRSTHALL
Trigger: TAGGAGCGCATGCGTAGAGCGGAGAGGCGGAGAGGGGCCCACCCAAGTCAAGGAGCTGACTCGCGCCTCCCCCACGCCGCGCCCTCGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS-3UTR CAA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCACCGCCGCTCGGAGTaGCCACAGCGACGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: GGGAARPAELRTTFLEPQHRRSE*PQRRGG
Trigger: TCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCGGTG...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCCACCGCCGCTCGGAGTaGCCACAGCGACGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGHRRSE*PQRRGG
Trigger: TCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCGGTG...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGACACTGAGCCCGCCTaGTCCAGGAAGTGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: RGTPTGTAAACVCADVGLDTEPA*SRKCRS
Trigger: CGACCTGCACTTCCTGGACAAGGCGGGCTCAGTGTC...CAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CAA 90 bp GGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGGTGGCCGCCGGGCCTTaGGCGGTGACTTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GQEEDAPARLRRATAEEGVAAGP*AVTWVL
Trigger: CAGCACCCAAGTCACCGCCAAAGGCCCGGCGGCCAC...CCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTAGCCGGGATGTCCGCTaGCCGGTGCGGGCCGTGAAG +
Preference number: 5 (lower is better)
Translates to: SGGGAARPAELRTTFLEPSRDVR*PVRAVK
Trigger: CTTCACGGCCCGCACCGGCAAGCGGACATCCCGGCT...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS CCA 90 bp CCGGGTCCTAGAACCGCATCCTCCCGCTCGCCTCGGGCGAGGGATTaGCCGGGTCTGGGTGAAGGGGATCACGGCCTGGGGATTGGAGGG +
Preference number: 5 (lower is better)
Translates to: PGPRTASSRSPRARD*PGLGEGDHGLGIGG
Trigger: CCCTCCAATCCCCAGGCCGTGATCCCCTTCACCCAGACCCGGCCAATCCCTCGCCCGAGGCGAGCGGGAGGATGCGGTTCTAGGACCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592415.1
CDS-3UTR CAA 90 bp GACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCGCTCGGCCCCCAGGTaGCCCTTCCGCAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: DGHCGGLCLRGCRAGSADRSAPR*PFRRVM
Trigger: CATCACCCTGCGGAAGGGCAACCTGGGGGCCGAGCG...ATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CAA 90 bp GACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATGTGGCCGCCGGGCCTTaGGCGGTGACTTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: DGHCGGLCLRGCRAGSADVAAGP*AVTWVL
Trigger: CAGCACCCAAGTCACCGCCAAAGGCCCGGCGGCCAC...ATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CAA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTGTGGCCGCCGGGCCTTaGGCGGTGACTTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGAVAAGP*AVTWVL
Trigger: CAGCACCCAAGTCACCGCCAAAGGCCCGGCGGCCAC...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp ACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGTGGGCTGGGGTCAGCTaGATGGTCAGGTGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: TPTGTAAACVCADVGLVPWAGVS*MVRWRL
Trigger: AAGCCGCCACCTGACCATCAAGCTGACCCCAGCCCA...CGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTGCCTTTGGCGGTGACTaGGGTGCTGGGGGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGAAFGGD*GAGGSP
Trigger: AGGGGAGCCCCCAGCACCCAAGTCACCGCCAAAGGC...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCTGTGATGATGTCGCGCTGCCGGCCGCGTaGCCCATGGTGGTCCCCACC +
Preference number: 5 (lower is better)
Translates to: AACVCADVGLVPQICDDVALPAA*PMVVPT
Trigger: GGTGGGGACCACCATGGGCAACGCGGCCGGCAGCGC...GACATCATCACAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp GGCCACAGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTCAGTTCAGGGCGCGGTaGAACCTCTCCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GHSGGGAARPAELRTTFLQFRAR*NLSSSS
Trigger: AGAGCTGGAGGAGAGGTTCAACCGCGCCCTGAACTG...AAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp GGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGGTCTGGATGGGCTTCTaGGCCTTCACTCCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: GQEEDAPARLRRATAEEGVWMGF*AFTPGP
Trigger: GGGCCCAGGAGTGAAGGCCAAGAAGCCCATCCAGAC...CCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCGACACTGAGCCCGCCTaGTCCAGGAAGTGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: GAARPAELRTTFLEPQPVDTEPA*SRKCRS
Trigger: CGACCTGCACTTCCTGGACAAGGCGGGCTCAGTGTC...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp ACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCTGTCTGCCAGCAGCTaGTCCATGGTGGGCGAGTTG +
Preference number: 5 (lower is better)
Translates to: TPTGTAAACVCADVGLVPLSASS*SMVGEL
Trigger: CAACTCGCCCACCATGGACAAGCTGCTGGCAGACAG...CGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CAA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCTGCTGCAAGCAGCATTaGGGGGAAGGGGCGGGCGAT +
Preference number: 5 (lower is better)
Translates to: GAARPAELRTTFLEPQPVCCKQH*GEGAGD
Trigger: ATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGCA...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp ACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCTCAGCAGCTGGACCTaGTCTGGGGGCAAGTTCATG +
Preference number: 5 (lower is better)
Translates to: TPTGTAAACVCADVGLVPLSSWT*SGGKFM
Trigger: CATGAACTTGCCCCCAGACAAGGTCCAGCTGCTGAG...CGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCTCAATGAGTGTCGCCTaGCTGGGGGCCTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGSMSVA*LGAFWA
Trigger: AGCCCAGAAGGCCCCCAGCAAGGCGACACTCATTGA...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp CGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGCGCTCGGCCCCCAGGTaGCCCTTCCGCAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: RPHTPAESTCRNSGYSERRSAPR*PFRRVM
Trigger: CATCACCCTGCGGAAGGGCAACCTGGGGGCCGAGCG...CCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp GGCCACAGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGCCCTCAGGAACTCCTaGAGCACCATGCAGTCATCC +
Preference number: 5 (lower is better)
Translates to: GHSGGGAARPAELRTTFLALRNS*STMQSS
Trigger: GGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGGC...AAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGTCCATGGTGGGCGAGTaGGCCCTCAGGAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: GGGAARPAELRTTFLEPQSMVGE*ALRNSL
Trigger: CAAGGAGTTCCTGAGGGCCAACTCGCCCACCATGGA...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCTCCATGGTGGGCGAGTaGGCCCTCAGGAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: GAARPAELRTTFLEPQPVSMVGE*ALRNSL
Trigger: CAAGGAGTTCCTGAGGGCCAACTCGCCCACCATGGA...GACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCCTGTCTGCCAGCAGCTaGTCCATGGTGGGCGAGTTG +
Preference number: 5 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGLSASS*SMVGEL
Trigger: CAACTCGCCCACCATGGACAAGCTGCTGGCAGACAG...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCTGTCTGCCAGCAGCTaGTCCATGGTGGGCGAGTTG +
Preference number: 5 (lower is better)
Translates to: GGGAARPAELRTTFLEPQLSASS*SMVGEL
Trigger: CAACTCGCCCACCATGGACAAGCTGCTGGCAGACAG...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp TGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGATGCACCAGCCCGTTaGAGGCGGGCCACAGCGGAG +
Preference number: 5 (lower is better)
Translates to: CKQHLGEGAGDAALCGQEDAPAR*RRATAE
Trigger: CTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATC...CTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGGTGGCCGCCGGGCCTTaGGCGGTGACTAGGGGGAAT +
Preference number: 5 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRVAAGP*AVTRGN
Trigger: ATTCCCCCTAGTCACCGCCAAAGGCCCGGCGGCCAC...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS TCA 90 bp CGAGGCTGTTCTCCCCTGGCCCTCCGGCCAGCCCTTCTTGGTAGGTaGGCCCAGTCCCTATGTGAGGCTCCTTCATGCCCAGCCATGGGC +
Preference number: 5 (lower is better)
Translates to: RGCSPLALRPALLGR*AQSLCEAPSCPAMG
Trigger: GCCCATGGCTGGGCATGAAGGAGCCTCACATAGGGACTGGGCTCACCTACCAAGAAGGGCTGGCCGGAGGGCCAGGGGAGAACAGCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591434.1
CDS-3UTR CAA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACTCAATGAGTGTCGCCTaGCTGGGGGCCTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: AARPAELRTTFLEPQPVHSMSVA*LGAFWA
Trigger: AGCCCAGAAGGCCCCCAGCAAGGCGACACTCATTGA...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGAAGTTCTTGGCCCGGTaGGCCTCAATGAGTGTCGCC +
Preference number: 5 (lower is better)
Translates to: GQEEDAPARLRRATAEEGKFLAR*ASMSVA
Trigger: GGCGACACTCATTGAGGCCAACCGGGCCAAGAACTT...CCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGGTGATGGCCAAGTTCTaGGCCCGGTTGGCCTCAATG +
Preference number: 5 (lower is better)
Translates to: GGGAARPAELRTTFLEPQVMAKF*ARLASM
Trigger: CATTGAGGCCAACCGGGCCAAGAACTTGGCCATCAC...CTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGGCCCTCAGGAACTCCTaGAGCACCATGCAGTCATCC +
Preference number: 5 (lower is better)
Translates to: GQEEDAPARLRRATAEEGALRNS*STMQSS
Trigger: GGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGGC...CCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GGCCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCCTGGGGATGTGGTCTaGGGGTTCTCTCCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: GQEEDAPARLRRATAEEGPGDVV*GFSPKY
Trigger: GTACTTCGGAGAGAACCCCAAGACCACATCCCCAGG...CCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp CGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGGCCTTTGGCGGTGACTaGGGTGCTGGGGGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: RPHTPAESTCRNSGYSERAFGGD*GAGGSP
Trigger: AGGGGAGCCCCCAGCACCCAAGTCACCGCCAAAGGC...CCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS CCA 90 bp TTGGCCCGGTTGGCCTCAATGAGTGTCGCCTTGCTGGGGGCCTTCTaGGCTGCCTTACTCTTGAGAGCGCTGAGGTCCAGGCTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: LARLASMSVALLGAF*AALLLRALRSRLGP
Trigger: AGGCCCCAGCCTGGACCTCAGCGCTCTCAAGAGTAAGGCAGCCCAGAAGGCCCCCAGCAAGGCGACACTCATTGAGGCCAACCGGGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS CCA 90 bp CTGAACTCGCCTCTTAAACTGGGGACCGAGAACAGGGAAGGCTGGTaGGTGGAGCCCGGCCTCCCACAGGCCCACCAAGTCCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LNSPLKLGTENREGW*VEPGLPQAHQVLRQ
Trigger: CTGCCTCAGGACTTGGTGGGCCTGTGGGAGGCCGGGCTCCACCCACCAGCCTTCCCTGTTCTCGGTCCCCAGTTTAAGAGGCGAGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592527.1
CDS-3UTR CAA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTGAGTTGGAAGCCCCGTaGTCTGTGCTCTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: SGGGAARPAELRTTFLEPELEAP*SVLSMS
Trigger: TGACATGGAGAGCACAGACAACGGGGCTTCCAACTC...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp GGGCTCCCCTTTGCCCGGGGTATCAGCGCCTGCCTCCTGGGCAGCGGCTTCTTTTGTCAGCAGCGCCACTaGCTCCTGCAGTTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: GLPFARGISACLLGSGFFCQQRH*LLQFLH
Trigger: ATGGAGGAACTGCAGGAGCAAGTGGCGCTGCTGACA...AAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCTGGGGCCTTGGGACTaGGTCTTGAACTGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: SGGGAARPAELRTTFLEPLGPWD*VLNCSS
Trigger: TGAGGAACAGTTCAAGACCAAGTCCCAAGGCCCCAG...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCCTGGGGCCTTGGGACTaGGTCTTGAACTGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGLGPWD*VLNCSS
Trigger: TGAGGAACAGTTCAAGACCAAGTCCCAAGGCCCCAG...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGTGGGCTGCCTTACTCTaGAGAGCGCTGAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKWAALL*RALRSR
Trigger: CCTGGACCTCAGCGCTCTCAAGAGTAAGGCAGCCCA...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGCGCTCGGCCCCCAGGTaGCCCTTCCGCAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRRSAPR*PFRRVM
Trigger: CATCACCCTGCGGAAGGGCAACCTGGGGGCCGAGCG...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GGCCACAGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTAGGATCTGGCGGAGTTaGTCAGAGGACTTGATGGAC +
Preference number: 5 (lower is better)
Translates to: GHSGGGAARPAELRTTFLRIWRS*SEDLMD
Trigger: GTCCATCAAGTCCTCTGACAAACTCCGCCAGATCCT...AAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp TGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGACACTGAGCCCGCCTaGTCCAGGAAGTGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: CKQHLGEGAGDAALCGQEDTEPA*SRKCRS
Trigger: CGACCTGCACTTCCTGGACAAGGCGGGCTCAGTGTC...CTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GGGCTCCCCTTTGCCCGGGGTATCAGCGCCTGCCTCCTGGGCAGCGGCTTCTTTCCTGGGGATGTGGTCTaGGGGTTCTCTCCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: GLPFARGISACLLGSGFFPGDVV*GFSPKY
Trigger: GTACTTCGGAGAGAACCCCAAGACCACATCCCCAGG...AAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTCCTGGGGATGTGGTCTaGGGGTTCTCTCCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGAPGDVV*GFSPKY
Trigger: GTACTTCGGAGAGAACCCCAAGACCACATCCCCAGG...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCTGTGATGATGTCGCCTTTGGCGGTGACTaGGGTGCTGGGGGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: AACVCADVGLVPQICDDVAFGGD*GAGGSP
Trigger: AGGGGAGCCCCCAGCACCCAAGTCACCGCCAAAGGC...GACATCATCACAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp TGTCCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGATGCACCAGCCCGTTaGAGGCGGGCCACAGCGGAG +
Preference number: 5 (lower is better)
Translates to: CPRPHTPAESTCRNSGYSDAPAR*RRATAE
Trigger: CTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATC...GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS GCA 90 bp GGGGCCAGGCAGGCAGCACCTCCAATGCACAATTATAACACTGTCTaGTGCCCAGTGCCCATGCTTGCGTGGCCCTGTGGCCCGTGTGCC +
Preference number: 5 (lower is better)
Translates to: GARQAAPPMHNYNTV*CPVPMLAWPCGPCA
Trigger: GGCACACGGGCCACAGGGCCACGCAAGCATGGGCACTGGGCAGCAGACAGTGTTATAATTGTGCATTGGAGGTGCTGCCTGCCTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS GCA 90 bp GTCGATTCGCTGAAGCGCTCCTACGAACCCCACGGGAGGGGTCAGTaGCCACCAGCAGGCTCCTTGGCACCAAGCCTCCATCTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: VDSLKRSYEPHGRGQ*PPAGSLAPSLHLLP
Trigger: GGGAAGAAGATGGAGGCTTGGTGCCAAGGAGCCTGCTGGTGGGCACTGACCCCTCCCGTGGGGTTCGTAGGAGCGCTTCAGCGAATCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS-3UTR CAA 90 bp GCTGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGGTGATGGCCAAGTTCTaGGCCCGGTTGGCCTCAATG +
Preference number: 5 (lower is better)
Translates to: AASSIWGKGRAMLPSVAKVMAKF*ARLASM
Trigger: CATTGAGGCCAACCGGGCCAAGAACTTGGCCATCAC...CTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCTGTGATGATGTCGTACGCCTCAATGGCTaGGCAGATGCGCTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: AACVCADVGLVPQICDDVVRLNG*ADALGP
Trigger: GGGGCCGAGCGCATCTGCCAAGCCATTGAGGCGTAC...GACATCATCACAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTGTGGAAGCCTGTGAGTaGCGGGTACTTCTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: SGGGAARPAELRTTFLEPVEACE*RVLLSN
Trigger: ATTGCTGAGAAGTACCCGCAACTCACAGGCTTCCAC...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTCCATGGTGGGCGAGTaGGCCCTCAGGAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRSMVGE*ALRNSL
Trigger: CAAGGAGTTCCTGAGGGCCAACTCGCCCACCATGGA...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000589911.1
CDS-3UTR CAA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGCTGTCTGCCAGCAGCTaGTCCATGGTGGGCGAGTTG +
Preference number: 5 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRLSASS*SMVGEL
Trigger: CAACTCGCCCACCATGGACAAGCTGCTGGCAGACAG...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000589911.1
CDS-3UTR CAA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCGCTAAGTATGGCTATTaGGAGGGGGCTTTAGGGTGG +
Preference number: 5 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGAKYGY*EGALGW
Trigger: CCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGC...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGAGCAGTTGCCTACCTaGGGTGCTGGGGGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFEQLPT*GAGGSP
Trigger: AGGGGAGCCCCCAGCACCCAAGGTAGGCAACTGCTC...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR CAA 90 bp CGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACCAAGCCCAGGAGCAGTaGCCTACCTTGGGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: RFSSEMRSICGRRAFGGDQAQEQ*PTLGAG
Trigger: CCCAGCACCCAAGGTAGGCAACTGCTCCTGGGCTTG...GTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS-3UTR CAA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGGTGAAGGGCACCGTCTaGATCACTGAGTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRVKGTV*ITEWGW
Trigger: CCACCCCCACTCAGTGATCAAGACGGTGCCCTTCAC...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS GCA 90 bp GCTGGGCTGGGGTCAGGACCCACTCTCACCAGCGCCACTTGCTCCTaGAGTTCCTCCATGTGCTCCAGCACAGCGTTCTTGGTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: AGLGSGPTLTSATCS*SSSMCSSTAFLVSV
Trigger: CACAGAGACCAAGAACGCTGTGCTGGAGCACATGGAGGAACTGCAGGAGCAAGTGGCGCTGGTGAGAGTGGGTCCTGACCCCAGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS GCA 90 bp GCCAGGCAGGCAGCACCTCCAATGCACAATTATAACACTGTCTGCTaGCCAGTGCCCATGCTTGCGTGGCCCTGTGGCCCGTGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: ARQAAPPMHNYNTVC*PVPMLAWPCGPCAL
Trigger: CAGGGCACACGGGCCACAGGGCCACGCAAGCATGGGCACTGGGCAGCAGACAGTGTTATAATTGTGCATTGGAGGTGCTGCCTGCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS GCA 90 bp GGCCTACCACCCGCCCCAGCCTCACCCGCAGGGTCTCCAACTCCTTaGGCGCCTGGCTTAGCTGTTTTTCCAGTTCTGCAATCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GLPPAPASPAGSPTP*APGLAVFPVLQSWP
Trigger: TGGCCAAGATTGCAGAACTGGAAAAACAGCTAAGCCAGGCGCGCAAGGAGTTGGAGACCCTGCGGGTGAGGCTGGGGCGGGTGGTAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 90 bp AGACTGGGGGAGGCTCCCAGATCCGCTCAGCCCAGGTGCCAAGGGTaGGCCGAGCCTGGCACTCGAACCCAAGCAAATAAGGAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: RLGEAPRSAQPRCQG*AEPGTRTQANKERK
Trigger: TTTCCTCTCCTTATTTGCTTGGGTTCGAGTGCCAGGCTCGGCCCACCCTTGGCACCTGGGCTGAGCGGATCTGGGAGCCTCCCCCAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 90 bp GCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCTaGCAGCCGAAGGAGACACATTTACCATTCAGGAGTCCGCCCAGA +
Preference number: 5 (lower is better)
Translates to: AAACVCADVGLVPQI*QPKETHLPFRSPPR
Trigger: TCTGGGCGGACTCCTGAATGGTAAATGTGTCTCCTTCGGCTGCCAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 90 bp CACCCATCAGCCCTCCAAATGAATCGACCCGAGGCTGTTCTCCCCTaGCCCTCCGGCCAGCCCTTCTTGGTAGGTGAGCCCAGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: HPSALQMNRPEAVLP*PSGQPFLVGEPSPY
Trigger: ATAGGGACTGGGCTCACCTACCAAGAAGGGCTGGCCGGAGGGCCAGGGGAGAACAGCCTCGGGTCGATTCATTTGGAGGGCTGATGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591434.1
CDS-3UTR CAA 90 bp CCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGACCCACCCAATGTGGTaGGTCCTCAGGGAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PRPHTPAESTCRNSGYSETHPMW*VLREVS
Trigger: GGAGACCTCCCTGAGGACCAACCACATTGGGTGGGT...CTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGGTCAGGTGGCGGCTTTaGGGCACGGAGGAGGGTGGA +
Preference number: 5 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRVRWRL*GTEEGG
Trigger: TCCACCCTCCTCCGTGCCCAAAAGCCGCCACCTGAC...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp GCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACGGCGTTCTGGGGTTCTTGTaGTTGAGGCTCAGAGCAATC +
Preference number: 5 (lower is better)
Translates to: ARPAELRTTFLEPQPVHGVLGFL*LRLRAI
Trigger: GATTGCTCTGAGCCTCAACAACAAGAACCCCAGAAC...GCCGTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp ACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCCCACATCAAAAATATaGTCCAGGTACGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: TPTGTAAACVCADVGLVPPTSKI*SRYAWI
Trigger: GATCCAGGCGTACCTGGACAATATTTTTGATGTGGG...CGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CAA 90 bp TGTCCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGTCTGGATGGGCTTCTaGGCCTTCACTCCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: CPRPHTPAESTCRNSGYSVWMGF*AFTPGP
Trigger: GGGCCCAGGAGTGAAGGCCAAGAAGCCCATCCAGAC...GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGGTGATGGCCAAGTTCTaGGCCCGGTTGGCCTCAATG +
Preference number: 5 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRVMAKF*ARLASM
Trigger: CATTGAGGCCAACCGGGCCAAGAACTTGGCCATCAC...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGGTACGCCTCAATGGCTaGGCAGATGCGCTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRVRLNG*ADALGP
Trigger: GGGGCCGAGCGCATCTGCCAAGCCATTGAGGCGTAC...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp ACGCCGACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGAGTTTGTCAGAGGACTaGATGGACATTGAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: TPTGTAAACVCADVGLVPSLSED*MDIEAA
Trigger: TGCAGCCTCAATGTCCATCAAGTCCTCTGACAAACT...CGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CAA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTAGGATCTGGCGGAGTTaGTCAGAGGACTTGATGGAC +
Preference number: 5 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGARIWRS*SEDLMD
Trigger: GTCCATCAAGTCCTCTGACAAACTCCGCCAGATCCT...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp CCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGGCCCTCAGGAACTCCTaGAGCACCATGCAGTCATCC +
Preference number: 5 (lower is better)
Translates to: PPFQLRDEVHLWPPGLWRALRNS*STMQSS
Trigger: GGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGGC...CCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000589911.1
CDS-3UTR CAA 90 bp CCAAGAGGAGGATGCACCAGCCCGTTTGAGGCGGGCCACAGCGGAGGAGGGGCTGCTAAGTATGGCTATTaGGAGGGGGCTTTAGGGTGG +
Preference number: 5 (lower is better)
Translates to: PRGGCTSPFEAGHSGGGAAKYGY*EGALGW
Trigger: CCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGC...AGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTCAGCCTGTCCACCTGGGGTTCTTGTTGTaGAGGCTCAGAGCAATCTCA +
Preference number: 5 (lower is better)
Translates to: AARPAELRTTFLEPQPVHLGFLL*RLRAIS
Trigger: TGAGATTGCTCTGAGCCTCAACAACAAGAACCCCAG...GTGGACAGGCTGAGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp CCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGTCCAGCACAGCGTTCTaGGTCTCTGTGTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PRPHTPAESTCRNSGYSESSTAF*VSVSSS
Trigger: GCTGGAGGACACAGAGACCAAGAACGCTGTGCTGGA...CTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp AGCGGAGGAGGGGCTGCCCGGCCAGCCGAGCTGAGGACCACCTTCCTTGAGCCTAGCACCTTCTCATCATaGAGCTCTGTGAAGACAGTG +
Preference number: 5 (lower is better)
Translates to: SGGGAARPAELRTTFLEPSTFSS*SSVKTV
Trigger: CACTGTCTTCACAGAGCTCAATGATGAGAAGGTGCT...AGGCTCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCTGTGATGATGTCTGGGCTGCCTTACTCTaGAGAGCGCTGAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: AACVCADVGLVPQICDDVWAALL*RALRSR
Trigger: CCTGGACCTCAGCGCTCTCAAGAGTAAGGCAGCCCA...GACATCATCACAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp CTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTAAGTTCTTGGCCCGGTaGGCCTCAATGAGTGTCGCC +
Preference number: 5 (lower is better)
Translates to: LRFSSEMRSICGRRAFGGKFLAR*ASMSVA
Trigger: GGCGACACTCATTGAGGCCAACCGGGCCAAGAACTT...ACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp TGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGTGCAGCAGCGTCTGCTaGCGATCAGTCGACTTCATC +
Preference number: 5 (lower is better)
Translates to: CKQHLGEGAGDAALCGQECSSVC*RSVDFI
Trigger: GATGAAGTCGACTGATCGCAAGCAGACGCTGCTGCA...CTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS TCA 90 bp ACCCTGGAATATCTGCCTGGTCCCCCACAGCAAGGACAGCTGGCTTaGGCAGAAAGAACCCTTTCCCATCCCAGGCTCCTGGGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: TLEYLPGPPQQGQLA*AERTLSHPRLLGQG
Trigger: ACCCTGCCCCAGGAGCCTGGGATGGGAAAGGGTTCTTTCTGCTCAAGCCAGCTGTCCTTGCTGTGGGGGACCAGGCAGATATTCCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS TCA 90 bp CAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTaGCTAGGGGGAATTTATAGCTCCAGCTCCAGGATGCCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: QLRDEVHLWPPGLWR*LGGIYSSSSRMPPH
Trigger: ATGGGGAGGCATCCTGGAGCTGGAGCTATAAATTCCCCCTAGTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS CCA 90 bp TTCTCCCACCACCCCACTTTGTGGCCCACATACTTGATGGTCAGGTaGCGGCTTTTGGGCACGGAGGAGGGTGGACCCTTGCTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: FSHHPTLWPTYLMVR*RLLGTEEGGPLLRS
Trigger: AGACCTCAGCAAGGGTCCACCCTCCTCCGTGCCCAAAAGCCGCCACCTGACCATCAAGTATGTGGGCCACAAAGTGGGGTGGTGGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585852.5
CDS-3UTR CAA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTTCCAGCACAGCGTTCTaGGTCTCTGTGTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFSSTAF*VSVSSS
Trigger: GCTGGAGGACACAGAGACCAAGAACGCTGTGCTGGA...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp GGGCTCCCCTTTGCCCGGGGTATCAGCGCCTGCCTCCTGGGCAGCGGCTTCTTTAGCACCTTCTCATCATaGAGCTCTGTGAAGACAGTG +
Preference number: 5 (lower is better)
Translates to: GLPFARGISACLLGSGFFSTFSS*SSVKTV
Trigger: CACTGTCTTCACAGAGCTCAATGATGAGAAGGTGCT...AAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGTGGGCTGCCTTACTCTaGAGAGCGCTGAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRWAALL*RALRSR
Trigger: CCTGGACCTCAGCGCTCTCAAGAGTAAGGCAGCCCA...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp TGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGTGGAAGCCTGTGAGTaGCGGGTACTTCTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: CKQHLGEGAGDAALCGQEVEACE*RVLLSN
Trigger: ATTGCTGAGAAGTACCCGCAACTCACAGGCTTCCAC...CTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCTGTGATGATGTCGCCCTCAGGAACTCCTaGAGCACCATGCAGTCATCC +
Preference number: 5 (lower is better)
Translates to: AACVCADVGLVPQICDDVALRNS*STMQSS
Trigger: GGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGGC...GACATCATCACAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS GCA 90 bp GGCGAGTTGGCCCTCAGGAACTCCTTGAGCACCATGCAGTCATCCTaGCGCACAAACTCTCTCTGTGTCAACTCTAGGCCTCGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GELALRNSLSTMQSS*RTNSLCVNSRPRCR
Trigger: CCTGCAGCGAGGCCTAGAGTTGACACAGAGAGAGTTTGTGCGGCAGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGGCCAACTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS CCA 90 bp TCCAGGGACACTGAGCCCGCCTTGTCCAGGAAGTGCAGGTCGCTGTaGAAGCCTGTGAGTTGCGGGTACTTCTCAGCAATGACCTTCACC +
Preference number: 5 (lower is better)
Translates to: SRDTEPALSRKCRSL*KPVSCGYFSAMTFT
Trigger: GGTGAAGGTCATTGCTGAGAAGTACCCGCAACTCACAGGCTTCCACAGCGACCTGCACTTCCTGGACAAGGCGGGCTCAGTGTCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS-3UTR CAA 90 bp TGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGTTGGTTCTGGGGTTCTaGTTGTTGAGGCTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: CKQHLGEGAGDAALCGQELVLGF*LLRLRA
Trigger: TGCTCTGAGCCTCAACAACAAGAACCCCAGAACCAA...CTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp CGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGTCCCCACACACCTCCTaGAAGTTGTCAAAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: RPHTPAESTCRNSGYSERSPHTS*KLSKAA
Trigger: TGCAGCCTTTGACAACTTCAAGGAGGTGTGTGGGGA...CCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp GACGGGCACTGCGGCGGCCTGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCCTTGGGACTTGGTCTaGAACTGTTCCTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: DGHCGGLCLRGCRAGSADPWDLV*NCSSKS
Trigger: TGATTTTGAGGAACAGTTCAAGACCAAGTCCCAAGG...ATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328118.7
ENST00000331495.8
CDS-3UTR CAA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGAAGTTCTTGGCCCGGTaGGCCTCAATGAGTGTCGCC +
Preference number: 5 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRKFLAR*ASMSVA
Trigger: GGCGACACTCATTGAGGCCAACCGGGCCAAGAACTT...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp CGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTGGCGGTGACAGGATCTGGCGGAGTTaGTCAGAGGACTTGATGGAC +
Preference number: 5 (lower is better)
Translates to: RFSSEMRSICGRRAFGGDRIWRS*SEDLMD
Trigger: GTCCATCAAGTCCTCTGACAAACTCCGCCAGATCCT...GTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp TGCTGCCTCCGTTTCAGCTCAGAGATGAGGTCCATCTGTGGCCGCCGGGCCTTTTGCAGCAGCGTCTGCTaGCGATCAGTCGACTTCATC +
Preference number: 5 (lower is better)
Translates to: CCLRFSSEMRSICGRRAFCSSVC*RSVDFI
Trigger: GATGAAGTCGACTGATCGCAAGCAGACGCTGCTGCA...AAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAATGCTGCAAGCAGCATTaGGGGGAAGGGGCGGGCGAT +
Preference number: 5 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQCCKQH*GEGAGD
Trigger: ATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGCA...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS TCA 90 bp CCAGCAGCTTGTCCATGGTGGGCGAGTTGGCCCTCAGGAACTCCTTaGGCACCATGCAGTCATCCTGCCGCACAAACTCTCTCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: PAACPWWASWPSGTP*APCSHPAAQTLSVS
Trigger: TGACACAGAGAGAGTTTGTGCGGCAGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGGCCAACTCGCCCACCATGGACAAGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS-3UTR CAA 90 bp CCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGCTCTTAAACCCCAGGTaGGACATCCAATCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: PRPHTPAESTCRNSGYSELLNPR*DIQSAA
Trigger: AGCAGCTGATTGGATGTCCAACCTGGGGTTTAAGAG...CTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp GGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCATTTGGGGGAAGGCCACGGTTCTCTTCATaGAGGAACTCCTGCACCCAC +
Preference number: 5 (lower is better)
Translates to: GYLEGALGWVLQAAFGGRPRFSS*RNSCTH
Trigger: GTGGGTGCAGGAGTTCCTCAATGAAGAGAACCGTGG...CCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp TGTCCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCCTCAGAGCAATCTCATaGACACAGGCTGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: CPRPHTPAESTCRNSGYSLRAIS*TQAGWF
Trigger: GAACCACCCAGCCTGTGTCAATGAGATTGCTCTGAG...GCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp AAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGGAGAGTTTGTCAGAGGACTaGATGGACATTGAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: KQHLGEGAGDAALCGQEESLSED*MDIEAA
Trigger: TGCAGCCTCAATGTCCATCAAGTCCTCTGACAAACT...CTCCTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp CCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGTCGGAGGTGACCTGCAGCAGCGTCTGCTaGCGATCAGTCGACTTCATC +
Preference number: 5 (lower is better)
Translates to: PAESTCRNSGYSERSEVTCSSVC*RSVDFI
Trigger: GATGAAGTCGACTGATCGCAAGCAGACGCTGCTGCA...GGTCACCTCCGACCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAATGTCAGCAGCGCCACTaGCTCCTGCAGTTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQCQQRH*LLQFLH
Trigger: ATGGAGGAACTGCAGGAGCAAGTGGCGCTGCTGACA...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp TGCAAGCAGCATTTGGGGGAAGGGGCGGGCGATGCTGCCCTCTGTGGCCAAGAGCCTTGGGACTTGGTCTaGAACTGTTCCTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: CKQHLGEGAGDAALCGQEPWDLV*NCSSKS
Trigger: TGATTTTGAGGAACAGTTCAAGACCAAGTCCCAAGG...CTCTTGGCCACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS GCA 90 bp TGGCTCCAGGGCACAAAGCTTAGCCTCCTAAGGACTCAGATTGTGTaGACATGGCAGGGGTACCGTTTATGTTTGCCAGACCCCTCCACC +
Preference number: 5 (lower is better)
Translates to: WLQGTKLSLLRTQIV*TWQGYRLCLPDPST
Trigger: GGTGGAGGGGTCTGGCAAACATAAACGGTACCCCTGCCATGTGCACACAATCTGAGTCCTTAGGAGGCTAAGCTTTGTGCCCTGGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS-3UTR CAA 90 bp CCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGAGGTCGGAGGTGACCCACACCTCCTTGAAGTaGTCAAAGGCTGCAAGGATG +
Preference number: 5 (lower is better)
Translates to: PAESTCRNSGYSERSEVTHTSLK*SKAARM
Trigger: CATCCTTGCAGCCTTTGACAACTTCAAGGAGGTGTG...GGTCACCTCCGACCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp CCACGGCCCCACACCCCTGCAGAATCCACCTGCAGAAATAGCGGCTACAGCGAGCCTTGGGACTTGGTCTaGAACTGTTCCTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: PRPHTPAESTCRNSGYSEPWDLV*NCSSKS
Trigger: TGATTTTGAGGAACAGTTCAAGACCAAGTCCCAAGG...CTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS TCA 90 bp AATCTCCAGGATCTGGCGGAGTTTGTCAGAGGACTTGATGGACATTaGGGCTGCAATGATGGCATTCAGTTGCTGGGGGTGGGATGGGGG +
Preference number: 5 (lower is better)
Translates to: NLQDLAEFVRGLDGH*GCNDGIQLLGVGWG
Trigger: CCCCCATCCCACCCCCAGCAACTGAATGCCATCATTGCAGCCTCAATGTCCATCAAGTCCTCTGACAAACTCCGCCAGATCCTGGAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 90 bp CCACTTGCTCCTGCAGTTCCTCCATGTGCTCCAGCACAGCGTTCTTaGTCTCTGTGTCCTCCAGCAGCGCCCCCACATCAAAAATATTGT +
Preference number: 5 (lower is better)
Translates to: PLAPAVPPCAPAQRS*SLCPPAAPPHQKYC
Trigger: ACAATATTTTTGATGTGGGGGCGCTGCTGGAGGACACAGAGACCAAGAACGCTGTGCTGGAGCACATGGAGGAACTGCAGGAGCAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000587856.1
CDS-3UTR CAA 90 bp CTCCTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAAGTCTGGATGGGCTTCTaGGCCTTCACTCCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: LLLSFLVGLNEAAKEGEEVWMGF*AFTPGP
Trigger: GGGCCCAGGAGTGAAGGCCAAGAAGCCCATCCAGAC...TTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp GTGTGGCAGCCAGTCCCCCAGAGGATAGCGCATTGGGTCAGAAGAAAGCATAGAGCAAGGACAGCTGGCTaGAGCAGAAAGAACCCTTTC +
Preference number: 5 (lower is better)
Translates to: VWQPVPQRIAHWVRRKHRARTAG*SRKNPF
Trigger: GAAAGGGTTCTTTCTGCTCAAGCCAGCTGTCCTTGC...TCTATGCTTTCTTCTGACCCAATGCGCTATCCTCTGGGGGACTGGCTGCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS TCA 90 bp AATCTCCAGGATCTGGCGGAGTTTGTCAGAGGACTTGATGGACATTaGGGCTGCAATGATGGCATTCAGTTGCGGCATGAGCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: NLQDLAEFVRGLDGH*GCNDGIQLRHEQLG
Trigger: GCCCAGCTGCTCATGCCGCAACTGAATGCCATCATTGCAGCCTCAATGTCCATCAAGTCCTCTGACAAACTCCGCCAGATCCTGGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
CDS GCA 90 bp CTCCTGAACTCGCCTCTTAAACCCCAGGTTGGACATCCAATCAGCTaGTACCTTTCGGCTGACCCCACCAGTATCCACATAGCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LLNSPLKPQVGHPIS*YLSADPTSIHIALQ
Trigger: CTGAAGAGCTATGTGGATACTGGTGGGGTCAGCCGAAAGGTAGCAGCTGATTGGATGTCCAACCTGGGGTTTAAGAGGCGAGTTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000592006.5
CDS-3UTR CAA 90 bp GAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCAGACTGCTCCAGGGGCTaGTTTTTCTCTGAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: EAKYGYLEGALGWVLQAADCSRG*FFSELE
Trigger: TTCCAACTCAGAGAAAAACAAGCCCCTGGAGCAGTC...TGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp CTCCTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAATCAATGAGTGTCGCCTaGCTGGGGGCCTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LLLSFLVGLNEAAKEGEESMSVA*LGAFWA
Trigger: AGCCCAGAAGGCCCCCAGCAAGGCGACACTCATTGA...TTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp CTCCTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAATCCATGGTGGGCGAGTaGGCCCTCAGGAACTCCTTG +
Preference number: 5 (lower is better)
Translates to: LLLSFLVGLNEAAKEGEESMVGE*ALRNSL
Trigger: CAAGGAGTTCCTGAGGGCCAACTCGCCCACCATGGA...TTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp CCTGCTGAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGTGAAGGGCACCGTCTaGATCACTGTGATGATGTCT +
Preference number: 5 (lower is better)
Translates to: PAEAKYGYLEGALGWVLQVKGTV*ITVMMS
Trigger: AGACATCATCACAGTGATCAAGACGGTGCCCTTCAC...TTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS CCA 90 bp GCTCCCCCATACATAGACAAGCAGGGTACACACACCCCCGATACATaGGCACACAAGGTATACACATGCACACACACAAAGAGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: APPYIDKQGTHTPDT*AHKVYTCTHTKRQS
Trigger: ACTCTGCCTCTTTGTGTGTGTGCATGTGTATACCTTGTGTGCCCATGTATCGGGGGTGTGTGTACCCTGCTTGTCTATGTATGGGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592527.1
CDS-3UTR CAA 90 bp GAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCACCCACATCAAAAATATaGTCCAGGTACGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: EAKYGYLEGALGWVLQAAPTSKI*SRYAWI
Trigger: GATCCAGGCGTACCTGGACAATATTTTTGATGTGGG...TGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS-3UTR CAA 90 bp GAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCAAGCACCTTCTCATCATaGAGCTCTGTGAAGACAGTG +
Preference number: 5 (lower is better)
Translates to: EAKYGYLEGALGWVLQAASTFSS*SSVKTV
Trigger: CACTGTCTTCACAGAGCTCAATGATGAGAAGGTGCT...TGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp GAGGCTAAGTATGGCTATTTGGAGGGGGCTTTAGGGTGGGTGCTGCAAGCAGCAAGTTTGTCAGAGGACTaGATGGACATTGAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: EAKYGYLEGALGWVLQAASLSED*MDIEAA
Trigger: TGCAGCCTCAATGTCCATCAAGTCCTCTGACAAACT...TGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000587489.5
CDS-3UTR CAA 90 bp CTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAACAGCTGGGGCCTTGGGACTaGGTCTTGAACTGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LLSFLVGLNEAAKEGEEQLGPWD*VLNCSS
Trigger: TGAGGAACAGTTCAAGACCAAGTCCCAAGGCCCCAG...CTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS-3UTR CAA 90 bp CTCCTGCTCAGCTTTCTTGTAGGCCTTAATGAAGCGGCTAAAGAGGGAGAAGAAGTGGAAGCCTGTGAGTaGCGGGTACTTCTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: LLLSFLVGLNEAAKEGEEVEACE*RVLLSN
Trigger: ATTGCTGAGAAGTACCCGCAACTCACAGGCTTCCAC...TTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS GCA 72 bp AGGACCTCCGGGAGGCGGCGGCGGCGGCGGTGGCGCTaGTCCGGGAGCCGGCTCTGCTGCAGGTGCGAGATC +
Preference number: 6 (lower is better)
Translates to: RTSGRRRRRRWR*SGSRLCCRCEI
Trigger: GATCTCGCACCTGCAGCAGAGCCGGCTCCCGGAGCAGCGCCACCGCCGCCGCCGCCGCCTCCCGGAGGTCCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328118.7
CDS TCA 72 bp TGCTCCGGGAGCCGGCTCTGCTGCAGGTGCGAGATCTaGGCCAGCGAGGGCGCGGCGTGGGGGAGGCGCGAG +
Preference number: 6 (lower is better)
Translates to: CSGSRLCCRCEI*ASEGAAWGRRE
Trigger: CTCGCGCCTCCCCCACGCCGCGCCCTCGCTGGCTCAGATCTCGCACCTGCAGCAGAGCCGGCTCCCGGAGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CAA 72 bp CGAGGGCGCGGCGTGGGGGAGGCGCGAGTCAGCTCCTaGACTTGGGTGGGCCCCTCTCCGCCTCTCCGCTCT +
Preference number: 6 (lower is better)
Translates to: RGRGVGEARVSS*TWVGPSPPLRS
Trigger: AGAGCGGAGAGGCGGAGAGGGGCCCACCCAAGTCAAGGAGCTGACTCGCGCCTCCCCCACGCCGCGCCCTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CAA 90 bp CCAGCGAGGGCGCGGCGTGGGGGAGGCGCGAGTCAGCTCCTTGACTaGGGTGGGCCCCTCTCCGCCTCTCCGCTCTACGCATGCGCTCCT +
Preference number: 6 (lower is better)
Translates to: PARARRGGGASQLLD*GGPLSASPLYACAP
Trigger: AGGAGCGCATGCGTAGAGCGGAGAGGCGGAGAGGGGCCCACCCAAGTCAAGGAGCTGACTCGCGCCTCCCCCACGCCGCGCCCTCGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CAA 90 bp CTGAGCCAGCGAGGGCGCGGCGTGGGGGAGGCGCGAGTCAGCTCCTaGACTTGGGTGGGCCCCTCTCCGCCTCTCCGCTCTACGCATGCG +
Preference number: 6 (lower is better)
Translates to: LSQRGRGVGEARVSS*TWVGPSPPLRSTHA
Trigger: CGCATGCGTAGAGCGGAGAGGCGGAGAGGGGCCCACCCAAGTCAAGGAGCTGACTCGCGCCTCCCCCACGCCGCGCCCTCGCTGGCTCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS TCA 72 bp GAGGGCGCGGCGTGGGGGAGGCGCGAGTCAGCTCCTTaGCTTGGGTGGGCCCCTCTCCGCCTCTCCGCTCTA +
Preference number: 6 (lower is better)
Translates to: EGAAWGRRESAP*LGWAPLRLSAL
Trigger: TAGAGCGGAGAGGCGGAGAGGGGCCCACCCAAGTCAAGGAGCTGACTCGCGCCTCCCCCACGCCGCGCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS GCA 72 bp CGGGGGACGCCGACGGGCACTGCGGCGGCCTGTGTCTaGGCGGATGTAGGGCTGGTTCCGCAGATCTGGCAG +
Preference number: 6 (lower is better)
Translates to: RGTPTGTAAACV*ADVGLVPQIWQ
Trigger: CTGCCAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 72 bp CCTCCCGCTCGCCTCGGGCGAGGGATTGGCCGGGTCTaGGTGAAGGGGATCACGGCCTGGGGATTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: PPARLGRGIGRV*VKGITAWGLEG
Trigger: CCCCTCCAATCCCCAGGCCGTGATCCCCTTCACCCAGACCCGGCCAATCCCTCGCCCGAGGCGAGCGGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592415.1
CDS CAA 72 bp GCGCGGCGTGGGGGAGGCGCGAGTCAGCTCCTTGACTaGGGTGGGCCCCTCTCCGCCTCTCCGCTCTACGCA +
Preference number: 6 (lower is better)
Translates to: ARRGGGASQLLD*GGPLSASPLYA
Trigger: TGCGTAGAGCGGAGAGGCGGAGAGGGGCCCACCCAAGTCAAGGAGCTGACTCGCGCCTCCCCCACGCCGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS TCA 72 bp CGAAGCCGCTCTGTCAGCTGTAGCACCAGCACATGGTaGGCCCCGACCCGCAGCCCGGCACTGGCACCGCCG +
Preference number: 6 (lower is better)
Translates to: RSRSVSCSTSTW*APTRSPALAPP
Trigger: CGGCGGTGCCAGTGCCGGGCTGCGGGTCGGGGCTCACCATGTGCTGGTGCTACAGCTGACAGAGCGGCTTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS GCA 72 bp GCACTGGCACCGCCGGTGAGGGGGCGGCATCAGGCATaGCTGCCTGGAAGACTGGGGGAGGCTCCCAGATCC +
Preference number: 6 (lower is better)
Translates to: ALAPPVRGRHQA*LPGRLGEAPRS
Trigger: GGATCTGGGAGCCTCCCCCAGTCTTCCAGGCAGGCATGCCTGATGCCGCCCCCTCACCGGCGGTGCCAGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 72 bp AGAACCGCATCCTCCCGCTCGCCTCGGGCGAGGGATTaGCCGGGTCTGGGTGAAGGGGATCACGGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: RTASSRSPRARD*PGLGEGDHGLG
Trigger: CCCCAGGCCGTGATCCCCTTCACCCAGACCCGGCCAATCCCTCGCCCGAGGCGAGCGGGAGGATGCGGTTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592415.1
CDS CCA 72 bp ACCGCCGGTGAGGGGGCGGCATCAGGCATGCCTGCCTaGAAGACTGGGGGAGGCTCCCAGATCCGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: TAGEGAASGMPA*KTGGGSQIRSA
Trigger: GGCTGAGCGGATCTGGGAGCCTCCCCCAGTCTTCCAGGCAGGCATGCCTGATGCCGCCCCCTCACCGGCGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 72 bp CGCCCTGCCCGCTCCGCCCACACCGGCATGAGCAGCTaGGCTGTGTCCGGGAAGTTGCCCAGGAAGGTGAGT +
Preference number: 6 (lower is better)
Translates to: RPARSAHTGMSS*AVSGKLPRKVS
Trigger: ACTCACCTTCCTGGGCAACTTCCCGGACACAGCCCAGCTGCTCATGCCGGTGTGGGCGGAGCGGGCAGGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CAA 72 bp CCCAGGCTGGCCTCACAGAGGAGCCGGGATGTCCGCTaGCCGGTGCGGGCCGTGAAGGGCACCGTCTTGATC +
Preference number: 6 (lower is better)
Translates to: PRLASQRSRDVR*PVRAVKGTVLI
Trigger: GATCAAGACGGTGCCCTTCACGGCCCGCACCGGCAAGCGGACATCCCGGCTCCTCTGTGAGGCCAGCCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331495.8
ENST00000586643.5
ENST00000587856.1
CDS GCA 72 bp CACCCCCGGAGTCGGAGCATCACCGCCGCTCGGAGTTaGCACAGCGACGGGGAGGATCTCGATGGAGACAGC +
Preference number: 6 (lower is better)
Translates to: HPRSRSITAARS*HSDGEDLDGDS
Trigger: GCTGTCTCCATCGAGATCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCGGTGATGCTCCGACTCCGGGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000587489.5
ENST00000587856.1
CDS CAA 72 bp GCACCCCCGGAGTCGGAGCATCACCGCCGCTCGGAGTaGCCACAGCGACGGGGAGGATCTCGATGGAGACAG +
Preference number: 6 (lower is better)
Translates to: APPESEHHRRSE*PQRRGGSRWRQ
Trigger: CTGTCTCCATCGAGATCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCGGTGATGCTCCGACTCCGGGGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000587489.5
ENST00000587856.1
CDS GCA 72 bp GCATCCCTGCAGCCCAGTACCAAGCCCAGGAGCAGTTaGCTACCTTGGGTGCTGGGGGCTCCCCTTTGCCCG +
Preference number: 6 (lower is better)
Translates to: ASLQPSTKPRSS*LPWVLGAPLCP
Trigger: CGGGCAAAGGGGAGCCCCCAGCACCCAAGGTAGGCAACTGCTCCTGGGCTTGGTACTGGGCTGCAGGGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS CCA 72 bp GGCCCGTGTGCCCTGTGGGCCTATGATGTGCTGGGCTaGGGTCAGGACCCACTCTCACCAGCGCCACTTGCT +
Preference number: 6 (lower is better)
Translates to: GPCALWAYDVLG*GQDPLSPAPLA
Trigger: AGCAAGTGGCGCTGGTGAGAGTGGGTCCTGACCCCAGCCCAGCACATCATAGGCCCACAGGGCACACGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS GCA 72 bp GCCCACCCTCCTCCAACTGGCACAAGTGGCCTTTCATaGTCAGCCTCCCCCACCACCTCCACACACCTGCCC +
Preference number: 6 (lower is better)
Translates to: AHPPPTGTSGLS*SASPTTSTHLP
Trigger: GGGCAGGTGTGTGGAGGTGGTGGGGGAGGCTGAGCATGAAAGGCCACTTGTGCCAGTTGGAGGAGGGTGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592527.1
CDS CAA 72 bp TGCATCCCTGCAGCCCAGTACCAAGCCCAGGAGCAGTaGCCTACCTTGGGTGCTGGGGGCTCCCCTTTGCCC +
Preference number: 6 (lower is better)
Translates to: CIPAAQYQAQEQ*PTLGAGGSPLP
Trigger: GGGCAAAGGGGAGCCCCCAGCACCCAAGGTAGGCAACTGCTCCTGGGCTTGGTACTGGGCTGCAGGGATGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS TCA 72 bp TCTCCCCTGGCCCTCCGGCCAGCCCTTCTTGGTAGGTaGGCCCAGTCCCTATGTGAGGCTCCTTCATGCCCA +
Preference number: 6 (lower is better)
Translates to: SPLALRPALLGR*AQSLCEAPSCP
Trigger: TGGGCATGAAGGAGCCTCACATAGGGACTGGGCTCACCTACCAAGAAGGGCTGGCCGGAGGGCCAGGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591434.1
CDS CCA 72 bp CTGACGATGCGGGAATTCCGCAGGGCCTTCCTGCTGTaGGCTGGGGTCAGCTTGATGGTCAGGTGGCGGCTT +
Preference number: 6 (lower is better)
Translates to: LTMREFRRAFLL*AGVSLMVRWRL
Trigger: AAGCCGCCACCTGACCATCAAGCTGACCCCAGCCCACAGCAGGAAGGCCCTGCGGAATTCCCGCATCGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331495.8
ENST00000587856.1
ENST00000591434.1
CDS CAA 72 bp TGGGCTGGGGTCAGCTTGATGGTCAGGTGGCGGCTTTaGGGCACGGAGGAGGGTGGACCCTTGCTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: WAGVSLMVRWRL*GTEEGGPLLRS
Trigger: AGACCTCAGCAAGGGTCCACCCTCCTCCGTGCCCAAAAGCCGCCACCTGACCATCAAGCTGACCCCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331495.8
ENST00000587856.1
ENST00000591434.1
CDS CAA 90 bp TCAAGGCCAAGTGGAGGGTTCCAGGGTAGGCTCGGGCTGCCTGGCTaGAAACTGGCCAGGGGAGTGGGTGAGATGCAGGGAGACGGGGAT +
Preference number: 6 (lower is better)
Translates to: SRPSGGFQGRLGLPG*KLARGVGEMQGDGD
Trigger: ATCCCCGTCTCCCTGCATCTCACCCACTCCCCTGGCCAGTTTCAAGCCAGGCAGCCCGAGCCTACCCTGGAACCCTCCACTTGGCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592527.1
CDS CAA 90 bp GTCAGCCGGGGAGAAGGGGGACACTTGATGGTCAGGTGGCGGCTTTaGGGCACGGAGGAGGGTGGACCCTTGCTGAGGTCTTCCACAGAC +
Preference number: 6 (lower is better)
Translates to: VSRGEGGHLMVRWRL*GTEEGGPLLRSSTD
Trigger: GTCTGTGGAAGACCTCAGCAAGGGTCCACCCTCCTCCGTGCCCAAAAGCCGCCACCTGACCATCAAGTGTCCCCCTTCTCCCCGGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592006.5
CDS CAA 90 bp AATCGACCCGAGGCTGTTCTCCCCTGGCCCTCCGGCCAGCCCTTCTaGGTAGGTGAGCCCAGTCCCTATGTGAGGCTCCTTCATGCCCAG +
Preference number: 6 (lower is better)
Translates to: NRPEAVLPWPSGQPF*VGEPSPYVRLLHAQ
Trigger: CTGGGCATGAAGGAGCCTCACATAGGGACTGGGCTCACCTACCAAGAAGGGCTGGCCGGAGGGCCAGGGGAGAACAGCCTCGGGTCGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591434.1
CDS CAA 90 bp TGGCCTACCACCCGCCCCAGCCTCACCCGCAGGGTCTCCAACTCCTaGCGCGCCTGGCTTAGCTGTTTTTCCAGTTCTGCAATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: WPTTRPSLTRRVSNS*RAWLSCFSSSAILA
Trigger: GGCCAAGATTGCAGAACTGGAAAAACAGCTAAGCCAGGCGCGCAAGGAGTTGGAGACCCTGCGGGTGAGGCTGGGGCGGGTGGTAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS GCA 72 bp CTCAATGAGTGTCGCCTTGCTGGGGGCCTTCTGGGCTaGCTTACTCTTGAGAGCGCTGAGGTCCAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LNECRLAGGLLG*LTLESAEVQAG
Trigger: CCCAGCCTGGACCTCAGCGCTCTCAAGAGTAAGGCAGCCCAGAAGGCCCCCAGCAAGGCGACACTCATTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS GCA 72 bp CTGTCCAGGGACACTGAGCCCGCCTTGTCCAGGAAGTaGAGGTCGCTGTGGAAGCCTGTGAGTTGCGGGTAC +
Preference number: 6 (lower is better)
Translates to: LSRDTEPALSRK*RSLWKPVSCGY
Trigger: GTACCCGCAACTCACAGGCTTCCACAGCGACCTGCACTTCCTGGACAAGGCGGGCTCAGTGTCCCTGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS CCA 72 bp GATGGTCAGGTGGCGGCTTTTGGGCACGGAGGAGGGTaGACCCTTGCTGAGGTCTTCCACAGACTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: DGQVAAFGHGGG*TLAEVFHRLLQ
Trigger: CTGGAGCAGTCTGTGGAAGACCTCAGCAAGGGTCCACCCTCCTCCGTGCCCAAAAGCCGCCACCTGACCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331495.8
ENST00000585852.5
ENST00000587856.1
ENST00000591434.1
ENST00000592006.5
CDS CCA 72 bp GGCTGTGGGCAGCGTGGTATCAGAGGCCAGGTCATCTaGGTACCTGAGGGGCTAGAGGGGCATCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: GCGQRGIRGQVI*VPEGLEGHLFS
Trigger: GGAGAAGAGATGCCCCTCTAGCCCCTCAGGTACCCAGATGACCTGGCCTCTGATACCACGCTGCCCACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CAA 72 bp GGAGAAGGGGGACACTTGATGGTCAGGTGGCGGCTTTaGGGCACGGAGGAGGGTGGACCCTTGCTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: GEGGHLMVRWRL*GTEEGGPLLRS
Trigger: AGACCTCAGCAAGGGTCCACCCTCCTCCGTGCCCAAAAGCCGCCACCTGACCATCAAGTGTCCCCCTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592006.5
CDS CAA 90 bp GTGATGGCCAAGTTCTTGGCCCGGTTGGCCTCAATGAGTGTCGCCTaGCTGGGGGCCTTCTGGGCTGCCTTACTCTTGAGAGCGCTGAGG +
Preference number: 6 (lower is better)
Translates to: VMAKFLARLASMSVA*LGAFWAALLLRALR
Trigger: CCTCAGCGCTCTCAAGAGTAAGGCAGCCCAGAAGGCCCCCAGCAAGGCGACACTCATTGAGGCCAACCGGGCCAAGAACTTGGCCATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS TCA 72 bp GGCGGCTTTTGGGCACGGAGGAGGGTGGACCCTTGCTaGGGTCTTCCACAGACTGCTCCAGGGGCTTGTTTT +
Preference number: 6 (lower is better)
Translates to: GGFWARRRVDPC*GLPQTAPGACF
Trigger: AAAACAAGCCCCTGGAGCAGTCTGTGGAAGACCTCAGCAAGGGTCCACCCTCCTCCGTGCCCAAAAGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331495.8
ENST00000585852.5
ENST00000587856.1
ENST00000591434.1
ENST00000592006.5
CDS CCA 72 bp TTGGCCTCAATGAGTGTCGCCTTGCTGGGGGCCTTCTaGGCTGCCTTACTCTTGAGAGCGCTGAGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LASMSVALLGAF*AALLLRALRSR
Trigger: CCTGGACCTCAGCGCTCTCAAGAGTAAGGCAGCCCAGAAGGCCCCCAGCAAGGCGACACTCATTGAGGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS CCA 72 bp CACCCCACTTTGTGGCCCACATACTTGATGGTCAGGTaGCGGCTTTTGGGCACGGAGGAGGGTGGACCCTTG +
Preference number: 6 (lower is better)
Translates to: HPTLWPTYLMVR*RLLGTEEGGPL
Trigger: CAAGGGTCCACCCTCCTCCGTGCCCAAAAGCCGCCACCTGACCATCAAGTATGTGGGCCACAAAGTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585852.5
CDS CAA 90 bp AACCCTGGAATATCTGCCTGGTCCCCCACAGCAAGGACAGCTGGCTaGAGCAGAAAGAACCCTTTCCCATCCCAGGCTCCTGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: NPGISAWSPTARTAG*SRKNPFPSQAPGAG
Trigger: CCCTGCCCCAGGAGCCTGGGATGGGAAAGGGTTCTTTCTGCTCAAGCCAGCTGTCCTTGCTGTGGGGGACCAGGCAGATATTCCAGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS CAA 90 bp CACCCCACTTTGTGGCCCACATACTTGATGGTCAGGTGGCGGCTTTaGGGCACGGAGGAGGGTGGACCCTTGCTGAGGTCTTCCACAGAC +
Preference number: 6 (lower is better)
Translates to: HPTLWPTYLMVRWRL*GTEEGGPLLRSSTD
Trigger: GTCTGTGGAAGACCTCAGCAAGGGTCCACCCTCCTCCGTGCCCAAAAGCCGCCACCTGACCATCAAGTATGTGGGCCACAAAGTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585852.5
CDS CAA 90 bp ATGATGTGCTGGGCTGGGGTCAGGACCCACTCTCACCAGCGCCACTaGCTCCTGCAGTTCCTCCATGTGCTCCAGCACAGCGTTCTTGGT +
Preference number: 6 (lower is better)
Translates to: MMCWAGVRTHSHQRH*LLQFLHVLQHSVLG
Trigger: ACCAAGAACGCTGTGCTGGAGCACATGGAGGAACTGCAGGAGCAAGTGGCGCTGGTGAGAGTGGGTCCTGACCCCAGCCCAGCACATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS TCA 72 bp TGTTCTCCCACCACCCCACTTTGTGGCCCACATACTTaGTGGTCAGGTGGCGGCTTTTGGGCACGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: CSPTTPLCGPHT*WSGGGFWARRR
Trigger: CCTCCTCCGTGCCCAAAAGCCGCCACCTGACCATCAAGTATGTGGGCCACAAAGTGGGGTGGTGGGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585852.5
CDS GCA 72 bp GCAGCACCTCCAATGCACAATTATAACACTGTCTGCTaGCCAGTGCCCATGCTTGCGTGGCCCTGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: AAPPMHNYNTVC*PVPMLAWPCGP
Trigger: CGGGCCACAGGGCCACGCAAGCATGGGCACTGGGCAGCAGACAGTGTTATAATTGTGCATTGGAGGTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CAA 72 bp TTGTGGCCCACATACTTGATGGTCAGGTGGCGGCTTTaGGGCACGGAGGAGGGTGGACCCTTGCTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: LWPTYLMVRWRL*GTEEGGPLLRS
Trigger: AGACCTCAGCAAGGGTCCACCCTCCTCCGTGCCCAAAAGCCGCCACCTGACCATCAAGTATGTGGGCCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585852.5
CDS CAA 90 bp GCCCGCCTTGTCCAGGAAGTGCAGGTCGCTGTGGAAGCCTGTGAGTaGCGGGTACTTCTCAGCAATGACCTTCACCAGGTAGTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: ARLVQEVQVAVEACE*RVLLSNDLHQVVQQ
Trigger: CTGCTGCACTACCTGGTGAAGGTCATTGCTGAGAAGTACCCGCAACTCACAGGCTTCCACAGCGACCTGCACTTCCTGGACAAGGCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS CAA 90 bp GCCAGCAGCTTGTCCATGGTGGGCGAGTTGGCCCTCAGGAACTCCTaGAGCACCATGCAGTCATCCTGCCGCACAAACTCTCTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: ASSLSMVGELALRNS*STMQSSCRTNSLCV
Trigger: GACACAGAGAGAGTTTGTGCGGCAGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGGCCAACTCGCCCACCATGGACAAGCTGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS TCA 72 bp TGTCCATGGTGGGCGAGTTGGCCCTCAGGAACTCCTTaGGCACCATGCAGTCATCCTGCCGCACAAACTCTC +
Preference number: 6 (lower is better)
Translates to: CPWWASWPSGTP*APCSHPAAQTL
Trigger: GAGAGTTTGTGCGGCAGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGGCCAACTCGCCCACCATGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS CCA 72 bp AAGCGCTCCCGCAGGGTCTCCAACTCCTTGCGCGCCTaGCTTAGCTGTTTTTCCAGTTCTGCAATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: KRSRRVSNSLRA*LSCFSSSAILA
Trigger: GGCCAAGATTGCAGAACTGGAAAAACAGCTAAGCCAGGCGCGCAAGGAGTTGGAGACCCTGCGGGAGCGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000587489.5
CDS CCA 72 bp GCTGCAATGATGGCATTCAGTTGCGGCATGAGCAGCTaGGCTGTGTCCGGGAAGTTGCCCAGGAAGGTGAGT +
Preference number: 6 (lower is better)
Translates to: AAMMAFSCGMSS*AVSGKLPRKVS
Trigger: ACTCACCTTCCTGGGCAACTTCCCGGACACAGCCCAGCTGCTCATGCCGCAACTGAATGCCATCATTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
CDS CCA 72 bp ACTGAGCCCGCCTTGTCCAGGAAGTGCAGGTCGCTGTaGAAGCCTGTGAGTTGCGGGTACTTCTCAGCAATG +
Preference number: 6 (lower is better)
Translates to: TEPALSRKCRSL*KPVSCGYFSAM
Trigger: CATTGCTGAGAAGTACCCGCAACTCACAGGCTTCCACAGCGACCTGCACTTCCTGGACAAGGCGGGCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS CCA 72 bp TGTGCTCTCCATGTCATACCTGGGGACAGGATGCAATaGGGCTGGAGGCCAACACTGCAGGGGCCACTTAAG +
Preference number: 6 (lower is better)
Translates to: CALHVIPGDRMQ*GWRPTLQGPLK
Trigger: CTTAAGTGGCCCCTGCAGTGTTGGCCTCCAGCCCCATTGCATCCTGTCCCCAGGTATGACATGGAGAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 72 bp TGGAAGCCCCGTTGTCTGTGCTCTCCATGTCATACCTaGGGACAGGATGCAATGGGGCTGGAGGCCAACACT +
Preference number: 6 (lower is better)
Translates to: WKPRCLCSPCHT*GQDAMGLEANT
Trigger: AGTGTTGGCCTCCAGCCCCATTGCATCCTGTCCCCAGGTATGACATGGAGAGCACAGACAACGGGGCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 72 bp AGCCTCACCCGCAGGGTCTCCAACTCCTTGCGCGCCTaGCTTAGCTGTTTTTCCAGTTCTGCAATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SLTRRVSNSLRA*LSCFSSSAILA
Trigger: GGCCAAGATTGCAGAACTGGAAAAACAGCTAAGCCAGGCGCGCAAGGAGTTGGAGACCCTGCGGGTGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 72 bp GGAGACACATTTACCATTCAGGAGTCCGCCCAGAGCTaGGAGCATGGCTCCAGGGCACAAAGCTTAGCCTCC +
Preference number: 6 (lower is better)
Translates to: GDTFTIQESAQS*EHGSRAQSLAS
Trigger: GGAGGCTAAGCTTTGTGCCCTGGAGCCATGCTCCCAGCTCTGGGCGGACTCCTGAATGGTAAATGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CAA 72 bp GATTCGCTGAAGCGCTCCCGCAGGGTCTCCAACTCCTaGCGCGCCTGGCTTAGCTGTTTTTCCAGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: DSLKRSRRVSNS*RAWLSCFSSSA
Trigger: TGCAGAACTGGAAAAACAGCTAAGCCAGGCGCGCAAGGAGTTGGAGACCCTGCGGGAGCGCTTCAGCGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000587489.5
CDS CAA 72 bp AAGTTCTTGGCCCGGTTGGCCTCAATGAGTGTCGCCTaGCTGGGGGCCTTCTGGGCTGCCTTACTCTTGAGA +
Preference number: 6 (lower is better)
Translates to: KFLARLASMSVA*LGAFWAALLLR
Trigger: TCTCAAGAGTAAGGCAGCCCAGAAGGCCCCCAGCAAGGCGACACTCATTGAGGCCAACCGGGCCAAGAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS GCA 72 bp GAGGAGGGTGGACCCTTGCTGAGGTCTTCCACAGACTaGTCCAGGGGCTTGTTTTTCTCTGAGTTGGAAGCC +
Preference number: 6 (lower is better)
Translates to: EEGGPLLRSSTD*SRGLFFSELEA
Trigger: GGCTTCCAACTCAGAGAAAAACAAGCCCCTGGAGCAGTCTGTGGAAGACCTCAGCAAGGGTCCACCCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331495.8
ENST00000585852.5
ENST00000587856.1
ENST00000591434.1
ENST00000592006.5
CDS CCA 72 bp TGGAATATCTGCCTGGTCCCCCACAGCAAGGACAGCTaGCTTGAGCAGAAAGAACCCTTTCCCATCCCAGGC +
Preference number: 6 (lower is better)
Translates to: WNICLVPHSKDS*LEQKEPFPIPG
Trigger: GCCTGGGATGGGAAAGGGTTCTTTCTGCTCAAGCCAGCTGTCCTTGCTGTGGGGGACCAGGCAGATATTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589911.1
CDS CAA 72 bp TTGTCCATGGTGGGCGAGTTGGCCCTCAGGAACTCCTaGAGCACCATGCAGTCATCCTGCCGCACAAACTCT +
Preference number: 6 (lower is better)
Translates to: LSMVGELALRNS*STMQSSCRTNS
Trigger: AGAGTTTGTGCGGCAGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGGCCAACTCGCCCACCATGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS CAA 72 bp TGGGGGCTGAATTCTCTGTTCTCCCACCACCCCACTTaGTGGCCCACATACTTGATGGTCAGGTGGCGGCTT +
Preference number: 6 (lower is better)
Translates to: WGLNSLFSHHPT*WPTYLMVRWRL
Trigger: AAGCCGCCACCTGACCATCAAGTATGTGGGCCACAAAGTGGGGTGGTGGGAGAACAGAGAATTCAGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585852.5
CDS GCA 72 bp GCCCTCAGGAACTCCTTGAGCACCATGCAGTCATCCTaGCGCACAAACTCTCTCTGTGTCAACTCTAGGCCT +
Preference number: 6 (lower is better)
Translates to: ALRNSLSTMQSS*RTNSLCVNSRP
Trigger: AGGCCTAGAGTTGACACAGAGAGAGTTTGTGCGGCAGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS CCA 72 bp GGGCTGAATTCTCTGTTCTCCCACCACCCCACTTTGTaGCCCACATACTTGATGGTCAGGTGGCGGCTTTTG +
Preference number: 6 (lower is better)
Translates to: GLNSLFSHHPTL*PTYLMVRWRLL
Trigger: CAAAAGCCGCCACCTGACCATCAAGTATGTGGGCCACAAAGTGGGGTGGTGGGAGAACAGAGAATTCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585852.5
CDS CCA 72 bp TGTGTCTGCGCGGATGTAGGGCTGGTTCCGCAGATCTaGCAGCCGAAGGAGACACATTTACCATTCAGGAGT +
Preference number: 6 (lower is better)
Translates to: CVCADVGLVPQI*QPKETHLPFRS
Trigger: ACTCCTGAATGGTAAATGTGTCTCCTTCGGCTGCCAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CAA 72 bp GTCCAGGAAGTGCAGGTCGCTGTGGAAGCCTGTGAGTaGCGGGTACTTCTCAGCAATGACCTTCACCAGGTA +
Preference number: 6 (lower is better)
Translates to: VQEVQVAVEACE*RVLLSNDLHQV
Trigger: TACCTGGTGAAGGTCATTGCTGAGAAGTACCCGCAACTCACAGGCTTCCACAGCGACCTGCACTTCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS CCA 72 bp TCACAGATGAGCTCCCACTTCTTCTCGTTGTCATACTaGCTCAGCAGCTGGACCTTGTCTGGGGGCAAGTTC +
Preference number: 6 (lower is better)
Translates to: SQMSSHFFSLSY*LSSWTLSGGKF
Trigger: GAACTTGCCCCCAGACAAGGTCCAGCTGCTGAGCCAGTATGACAACGAGAAGAAGTGGGAGCTCATCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331495.8
CDS CCA 72 bp GCACCCAGCCCCACCCCTGATGGCTTCTTAACATACTaGTGTCCCAAACTCTGTATGAGTCCCTTACTCGGA +
Preference number: 6 (lower is better)
Translates to: APSPTPDGFLTY*CPKLCMSPLLG
Trigger: TCCGAGTAAGGGACTCATACAGAGTTTGGGACACCAGTATGTTAAGAAGCCATCAGGGGTGGGGCTGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585852.5
CDS CAA 72 bp AAGAGTGGCATTCGGAACTTAGTCTGGATGGGCTTCTaGGCCTTCACTCCTGGGCCCAATTCTGAGTCGCGT +
Preference number: 6 (lower is better)
Translates to: KSGIRNLVWMGF*AFTPGPNSESR
Trigger: ACGCGACTCAGAATTGGGCCCAGGAGTGAAGGCCAAGAAGCCCATCCAGACTAAGTTCCGAATGCCACTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000587489.5
ENST00000587856.1
CDS TCA 72 bp CCAGGTTGGACATCCAATCAGCTGCTACCTTTCGGCTaGCCCCACCAGTATCCACATAGCTCTTCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: PGWTSNQLLPFG*PHQYPHSSSAS
Trigger: AGAAGCTGAAGAGCTATGTGGATACTGGTGGGGTCAGCCGAAAGGTAGCAGCTGATTGGATGTCCAACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000592006.5
CDS TCA 72 bp GATCTGGCGGAGTTTGTCAGAGGACTTGATGGACATTaGGGCTGCAATGATGGCATTCAGTTGCTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: DLAEFVRGLDGH*GCNDGIQLLGV
Trigger: CACCCCCAGCAACTGAATGCCATCATTGCAGCCTCAATGTCCATCAAGTCCTCTGACAAACTCCGCCAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS GCA 72 bp TCGCCTCTTAAACCCCAGGTTGGACATCCAATCAGCTaGTACCTTTCGGCTGACCCCACCAGTATCCACATA +
Preference number: 6 (lower is better)
Translates to: SPLKPQVGHPIS*YLSADPTSIHI
Trigger: TATGTGGATACTGGTGGGGTCAGCCGAAAGGTAGCAGCTGATTGGATGTCCAACCTGGGGTTTAAGAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331495.8
ENST00000592006.5
CDS CCA 72 bp AAGCTTAGCCTCCTAAGGACTCAGATTGTGTGCACATaGCAGGGGTACCGTTTATGTTTGCCAGACCCCTCC +
Preference number: 6 (lower is better)
Translates to: KLSLLRTQIVCT*QGYRLCLPDPS
Trigger: GGAGGGGTCTGGCAAACATAAACGGTACCCCTGCCATGTGCACACAATCTGAGTCCTTAGGAGGCTAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CAA 72 bp CCAAAGGCCAGGACAATCTCCAGGATCTGGCGGAGTTaGTCAGAGGACTTGATGGACATTGAGGCTGCAATG +
Preference number: 6 (lower is better)
Translates to: PKARTISRIWRS*SEDLMDIEAAM
Trigger: CATTGCAGCCTCAATGTCCATCAAGTCCTCTGACAAACTCCGCCAGATCCTGGAGATTGTCCTGGCCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
ENST00000587856.1
CDS CAA 72 bp GAGGGGCCTGTCAGTGAGGGTGCTCACCCACACTCATaGAGAAAGACACCCAACAGATTCAGGCTTTGGATT +
Preference number: 6 (lower is better)
Translates to: EGPVSEGAHPHS*RKTPNRFRLWI
Trigger: AATCCAAAGCCTGAATCTGTTGGGTGTCTTTCTCAATGAGTGTGGGTGAGCACCCTCACTGACAGGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CAA 90 bp AAGGCCAGGACAATCTCCAGGATCTGGCGGAGTTTGTCAGAGGACTaGATGGACATTGAGGCTGCAATGATGGCATTCAGTTGCGGCATG +
Preference number: 6 (lower is better)
Translates to: KARTISRIWRSLSED*MDIEAAMMAFSCGM
Trigger: CATGCCGCAACTGAATGCCATCATTGCAGCCTCAATGTCCATCAAGTCCTCTGACAAACTCCGCCAGATCCTGGAGATTGTCCTGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
CDS TCA 72 bp GATCTGGCGGAGTTTGTCAGAGGACTTGATGGACATTaGGGCTGCAATGATGGCATTCAGTTGCGGCATGAG +
Preference number: 6 (lower is better)
Translates to: DLAEFVRGLDGH*GCNDGIQLRHE
Trigger: CTCATGCCGCAACTGAATGCCATCATTGCAGCCTCAATGTCCATCAAGTCCTCTGACAAACTCCGCCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328118.7
ENST00000331495.8
ENST00000586643.5
ENST00000587489.5
CDS GCA 72 bp GGCACAAAGCTTAGCCTCCTAAGGACTCAGATTGTGTaGACATGGCAGGGGTACCGTTTATGTTTGCCAGAC +
Preference number: 6 (lower is better)
Translates to: GTKLSLLRTQIV*TWQGYRLCLPD
Trigger: GTCTGGCAAACATAAACGGTACCCCTGCCATGTGCACACAATCTGAGTCCTTAGGAGGCTAAGCTTTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587856.1
CDS CCA 72 bp TACATAGACAAGCAGGGTACACACACCCCCGATACATaGGCACACAAGGTATACACATGCACACACACAAAG +
Preference number: 6 (lower is better)
Translates to: YIDKQGTHTPDT*AHKVYTCTHTK
Trigger: CTTTGTGTGTGTGCATGTGTATACCTTGTGTGCCCATGTATCGGGGGTGTGTGTACCCTGCTTGTCTATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592527.1