RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLII (Homo sapiens)

Ensembl gene IDs: ENSG00000177731

Ensembl transcript IDs: ENST00000327031.9, ENST00000459958.2, ENST00000461110.2, ENST00000465046.1, ENST00000473425.2, ENST00000474265.5, ENST00000478416.1, ENST00000487369.5, ENST00000487693.5, ENST00000488221.5, ENST00000493401.1, ENST00000493600.6, ENST00000496727.1, ENST00000545457.6, ENST00000577398.6, ENST00000577402.1, ENST00000577485.1, ENST00000577626.1, ENST00000578101.5, ENST00000578558.5, ENST00000579294.5, ENST00000580966.1, ENST00000581349.5, ENST00000581401.1, ENST00000581858.5, ENST00000582626.1, ENST00000628188.1, ENST00000638205.1, ENST00000638207.2, ENST00000638404.1, ENST00000638492.1, ENST00000638497.1, ENST00000638637.1, ENST00000638673.1, ENST00000638796.1, ENST00000638812.1, ENST00000638833.1, ENST00000638982.1, ENST00000639036.1, ENST00000639112.1, ENST00000639123.1, ENST00000639125.1, ENST00000639299.1, ENST00000639646.1, ENST00000639718.1, ENST00000639898.1, ENST00000639925.1, ENST00000639967.1, ENST00000640241.1, ENST00000640363.1, ENST00000640412.1, ENST00000640502.1, ENST00000640595.1, ENST00000640953.1

Found 2280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATGGCGTGGCCGGTGCAGCATCCCGCACAGCTCCTGACCCAGCTTaGGGGCGGCAGCGCGCACCAGGCGCGGGGACTTGCGGCCGAGCC +
Preference number: 1 (lower is better)
Translates to: HGVAGAASRTAPDPA*GRQRAPGAGTCGRA
Trigger: GGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTCAAGCTGGGTCAGGAGCTGTGCGGGATGCTGCACCGGCCACGCCATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 90 bp CTGACCGTGGCATGGCGTGGCCGGTGCAGCATCCCGCACAGCTCCTaGCCCAGCTTGAGGGCGGCAGCGCGCACCAGGCGCGGGGACTTG +
Preference number: 1 (lower is better)
Translates to: LTVAWRGRCSIPHSS*PSLRAAARTRRGDL
Trigger: CAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTCAAGCTGGGTCAGGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGCCACGGTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp CTGCGCCTCGGTGCCCTCGAGGCTGCGGCTGACCGTGGCATGGCGTaGCCGGTGCAGCATCCCGCACAGCTCCTGACCCAGCTTGAGGGC +
Preference number: 1 (lower is better)
Translates to: LRLGALEAAADRGMA*PVQHPAQLLTQLEG
Trigger: GCCCTCAAGCTGGGTCAGGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGCCACGGTCAGCCGCAGCCTCGAGGGCACCGAGGCGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp GCCTTGCAGAAGGCGCTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGC +
Preference number: 1 (lower is better)
Translates to: ALQKALQAWKQRVKA*CSLPLRTRRSRRGR
Trigger: GCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGCCTTCTGCAAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR GCA 90 bp GGCAGGTTGCTCTGGGTGCGCTGGGTGCTCCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGGAGCTGCCGGAGCTGTGCATGCAGC +
Preference number: 1 (lower is better)
Translates to: GRLLWVRWVLRRCRV*RAVIAGSCRSCACS
Trigger: GCTGCATGCACAGCTCCGGCAGCTCCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp AGGCTGGTGGGCAGGTTGCTCTGGGTGCGCTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTCATCGCTGGGAGCTGCCGGAGCTGT +
Preference number: 1 (lower is better)
Translates to: RLVGRLLWVRWVLRR*RVCRAVIAGSCRSC
Trigger: ACAGCTCCGGCAGCTCCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp ACCGGGTGCAGAGGGCGCTGCCGTTGGTGCGGATCTGGTAGAGGCTaGGCTGTTGGGCGCCCTGGACCGCCTTCCTCTTGCCCCGGTGGA +
Preference number: 1 (lower is better)
Translates to: TGCRGRCRWCGSGRG*AVGRPGPPSSCPGG
Trigger: TCCACCGGGGCAAGAGGAAGGCGGTCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp TTGCAGAAGGCGCTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCA +
Preference number: 1 (lower is better)
Translates to: LQKALQAWKQRVKAC*SLPLRTRRSRRGRS
Trigger: TGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGCCTTCTGCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR TCA 90 bp TCGCTGGGAGCTGCCGGAGCTGTGCATGCAGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGTGCACCAGGCGGCGCATCTGCGGGG +
Preference number: 1 (lower is better)
Translates to: SLGAAGAVHAAGGFH*ARASAGAPGGASAG
Trigger: CCCCGCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACAGCTCCGGCAGCTCCCAGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 90 bp GGGCGGCAGCGCGCACCAGGCGCGGGGACTTGCGGCCGAGCCAGATaGACACGTCGGACCAACAGTCCAGAATGTACACGCAGCGCGTGT +
Preference number: 1 (lower is better)
Translates to: GRQRAPGAGTCGRAR*TRRTNSPECTRSAC
Trigger: ACACGCGCTGCGTGTACATTCTGGACTGTTGGTCCGACGTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp CGGAGCTGTGCATGCAGCAGGGGGTTTCCATTGAGCACGAGCGTCTaGAGGTGCACCAGGCGGCGCATCTGCGGGGGCAGGCTCTCCAGG +
Preference number: 1 (lower is better)
Translates to: RSCACSRGFPLSTSV*RCTRRRICGGRLSR
Trigger: CCTGGAGAGCCTGCCCCCGCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACAGCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp TGTGCATGCAGCAGGGGGTTTCCATTGAGCACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGCGGGGGCAGGCTCTCCAGGCGGTTC +
Preference number: 1 (lower is better)
Translates to: CACSRGFPLSTSVCR*TRRRICGGRLSRRF
Trigger: GAACCGCCTGGAGAGCCTGCCCCCGCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp TGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGGTGCGCTGGGTGCTCCGCAGGTGCA +
Preference number: 1 (lower is better)
Translates to: CRTDPRLRGCSDPPG*WAGCSGCAGCSAGA
Trigger: TGCACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR TCA 90 bp CGATGTTGTACCACTCAGCGGCACGGTCTGCGGGCTTGGGCGGCATaGCCAGGTTGGGGTTCTCCCGCACATCCAGGACCTCGATCTCCG +
Preference number: 1 (lower is better)
Translates to: RCCTTQRHGLRAWAA*PGWGSPAHPGPRSP
Trigger: CGGAGATCGAGGTCCTGGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTACAACATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp GCAGCCACGGTAGCAGGAGAGGCACCCGCTAGCCGCAGCTGGTTCTaGAGCGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCG +
Preference number: 1 (lower is better)
Translates to: AATVAGEAPASRSWF*SEKSMLYHSAARSA
Trigger: CGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGCTGCGGCTAGCGGGTGCCTCTCCTGCTACCGTGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 90 bp CGGGCCACGATGGCGCGCAGCGATGGCAGGCTGGACAGCTCCCCATaGAGCGTGGTCAGGTTGTTGTGGCTCACAGACAAGTGTTCCAGC +
Preference number: 1 (lower is better)
Translates to: RATMARSDGRLDSSP*SVVRLLWLTDKCSS
Trigger: GCTGGAACACTTGTCTGTGAGCCACAACAACCTGACCACGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCATCGTGGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 90 bp CTATCTGCCAGATGGTCAGTCCGGGCAGCTGGCCCACGTCCTCCGTaGAGAACTCGGAGTAGTCAAGGCGGGGCTTCTCCAGGCCCTGGT +
Preference number: 1 (lower is better)
Translates to: LSARWSVRAAGPRPP*RTRSSQGGASPGPG
Trigger: ACCAGGGCCTGGAGAAGCCCCGCCTTGACTACTCCGAGTTCTTCACGGAGGACGTGGGCCAGCTGCCCGGACTGACCATCTGGCAGATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 90 bp CCTCGGCCAGCGACATGGGCGGCTGCCGCGGCAGGAAAAGCGCAGTaGGGTCAGCCTTCATCTGGTCTTTCTTCTCGGCGTCGCGTTTCA +
Preference number: 1 (lower is better)
Translates to: PRPATWAAAAAGKAQ*GQPSSGLSSRRRVS
Trigger: TGAAACGCGACGCCGAGAAGAAAGACCAGATGAAGGCTGACCTCACTGCGCTTTTCCTGCCGCGGCAGCCGCCCATGTCGCTGGCCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp GGCGGCTGCCGCGGCAGGAAAAGCGCAGTGAGGTCAGCCTTCATCTaGTCTTTCTTCTCGGCGTCGCGTTTCACCTTCCCGGAGAGACCC +
Preference number: 1 (lower is better)
Translates to: GGCRGRKSAVRSAFI*SFFSASRFTFPERP
Trigger: GGGTCTCTCCGGGAAGGTGAAACGCGACGCCGAGAAGAAAGACCAGATGAAGGCTGACCTCACTGCGCTTTTCCTGCCGCGGCAGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp GTTCTGCAGCGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTaGGGGCTTGGGCGGCATGACCAGGTTGGGGTTCTCCCGCACATC +
Preference number: 1 (lower is better)
Translates to: VLQREVDVVPLSGTV*GLGRHDQVGVLPHI
Trigger: GATGTGCGGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp CCGTGGAAGGCTTCCTCCACCAGCACAGGCACGAAGTTCTCTATCTaGCAGATGGTCAGTCCGGGCAGCTGGCCCACGTCCTCCGTGAAG +
Preference number: 1 (lower is better)
Translates to: PWKASSTSTGTKFSI*QMVSPGSWPTSSVK
Trigger: CTTCACGGAGGACGTGGGCCAGCTGCCCGGACTGACCATCTGGCAGATAGAGAACTTCGTGCCTGTGCTGGTGGAGGAAGCCTTCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp CGGCCCTGCCAGAAGTACACGATGCACTGGAAGTCCTCCTCTGGCTaGTTCTCCTCTGCCTCAGCGGTTGCTTCCTCGCCTTCTTTGCCC +
Preference number: 1 (lower is better)
Translates to: RPCQKYTMHWKSSSG*FSSASAVASSPSLP
Trigger: GGGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTTCTGGCAGGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 90 bp CCTCCCGGACAGTGCGGCACTCAGCACCCAGGTAGTTGCGCAAGTTaGCAGCGTGGATGGCAGAGCAAGCTTTCTTGTCGAGTGTGGCCT +
Preference number: 1 (lower is better)
Translates to: PPGQCGTQHPGSCAS*QRGWQSKLSCRVWP
Trigger: AGGCCACACTCGACAAGAAAGCTTGCTCTGCCATCCACGCTGTCAACTTGCGCAACTACCTGGGTGCTGAGTGCCGCACTGTCCGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp CGATGGCGCGCAGCGATGGCAGGCTGGACAGCTCCCCATGAAGCGTaGTCAGGTTGTTGTGGCTCACAGACAAGTGTTCCAGCTTCTGCA +
Preference number: 1 (lower is better)
Translates to: RWRAAMAGWTAPHEA*SGCCGSQTSVPASA
Trigger: TGCAGAAGCTGGAACACTTGTCTGTGAGCCACAACAACCTGACCACGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp AGGCTGGGCTGTTGGGCGCCCTGGACCGCCTTCCTCTTGCCCCGGTaGATGATGAACTTCCTCTTGAAATGGGACAGGAACTTGGGGTTC +
Preference number: 1 (lower is better)
Translates to: RLGCWAPWTAFLLPR*MMNFLLKWDRNLGF
Trigger: GAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCATCCACCGGGGCAAGAGGAAGGCGGTCCAGGGCGCCCAACAGCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 90 bp CATGGTGTTCAGGATGTCTTCTGCCAACTTGGCTTCGTCAGGGTCTaGTGCCCGGCCCACCCAGGCATACACGATGCCCTGGTTGTCCTC +
Preference number: 1 (lower is better)
Translates to: HGVQDVFCQLGFVRV*CPAHPGIHDALVVL
Trigger: GAGGACAACCAGGGCATCGTGTATGCCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAACACCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp GAAGTACACGATGCACTGGAAGTCCTCCTCTGGCTGCTTCTCCTCTaGCTCAGCGGTTGCTTCCTCGCCTTCTTTGCCCTCGGCCTTCTC +
Preference number: 1 (lower is better)
Translates to: EVHDALEVLLWLLLL*LSGCFLAFFALGLL
Trigger: GAGAAGGCCGAGGGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp TGTTCTTCTCCTGGGCAACATCTGACATGCCCTTCAGCACCTGCTTaGCCTGGTCATCCTGGGCTGAATCCTTGCGCCTCCGCAGTCGCA +
Preference number: 1 (lower is better)
Translates to: CSSPGQHLTCPSAPA*PGHPGLNPCASAVA
Trigger: TGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAGAAGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp TGTAGAAGTGGCCAAACTCCTCTTCCGGCAGCCGCGCAAACTTCTTaGCCTCCAGCACGAAACCCTCCATGCCGTCTAGGTCTTCGTTCC +
Preference number: 1 (lower is better)
Translates to: CRSGQTPLPAAAQTS*PPARNPPCRLGLRS
Trigger: GGAACGAAGACCTAGACGGCATGGAGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGCTGCCGGAAGAGGAGTTTGGCCACTTCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp CTGGCTGCTTCTCCTCTGCCTCAGCGGTTGCTTCCTCGCCTTCTTTaGCCTCGGCCTTCTCCTCCTTGTCTTCCTTCTTTTCCTCCTCCT +
Preference number: 1 (lower is better)
Translates to: LAASPLPQRLLPRLL*PRPSPPCLPSFPPP
Trigger: AGGAGGAGGAAAAGAAGGAAGACAAGGAGGAGAAGGCCGAGGGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp CTGAAGGTGAAGGTGAGCCAGCCCATATTGGAGGCTTCACGGCCCTaGCAGAAGTACACGATGCACTGGAAGTCCTCCTCTGGCTGCTTC +
Preference number: 1 (lower is better)
Translates to: LKVKVSQPILEASRP*QKYTMHWKSSSGCF
Trigger: GAAGCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATATGGGCTGGCTCACCTTCACCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp TTCACGGCCCTGCCAGAAGTACACGATGCACTGGAAGTCCTCCTCTaGCTGCTTCTCCTCTGCCTCAGCGGTTGCTTCCTCGCCTTCTTT +
Preference number: 1 (lower is better)
Translates to: FTALPEVHDALEVLL*LLLLCLSGCFLAFF
Trigger: AAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp TCGTCAGGGTCTGATGCCCGGCCCACCCAGGCATACACGATGCCCTaGTTGTCCTCACTCTCAAAGGGAACCTTGAGGATGAAGCAGAAC +
Preference number: 1 (lower is better)
Translates to: SSGSDARPTQAYTMP*LSSLSKGTLRMKQN
Trigger: GTTCTGCTTCATCCTCAAGGTTCCCTTTGAGAGTGAGGACAACCAGGGCATCGTGTATGCCTGGGTGGGCCGGGCATCAGACCCTGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp ACCGCCTTCCTCTTGCCCCGGTGGATGATGAACTTCCTCTTGAAATaGGACAGGAACTTGGGGTTCTCCTGCTGCTGCGTCATGCGTACC +
Preference number: 1 (lower is better)
Translates to: TAFLLPRWMMNFLLK*DRNLGFSCCCVMRT
Trigger: GGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCATCCACCGGGGCAAGAGGAAGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTaGACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGG +
Preference number: 1 (lower is better)
Translates to: HICFIPSGRVRGLHT*THTVERVGFPRPLR
Trigger: CCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR GCA 90 bp CGCTCTCCTCCTGCTTTTTGTTCTTCTCCTGGGCAACATCTGACATaGCCTTCAGCACCTGCTTGGCCTGGTCATCCTGGGCTGAATCCT +
Preference number: 1 (lower is better)
Translates to: RSPPAFCSSPGQHLT*PSAPAWPGHPGLNP
Trigger: AGGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAGAAGAACAAAAAGCAGGAGGAGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp GGTTCTCCCGCACATCCAGGACCTCGATCTCCGTCAGGAAATGGATaGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTT +
Preference number: 1 (lower is better)
Translates to: GSPAHPGPRSPSGNG*LLGGSPGGSCSGQV
Trigger: AACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATCCATTTCCTGACGGAGATCGAGGTCCTGGATGTGCGGGAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp TGTAGGAGGTGTCAAACATGGTGTTCAGGATGTCTTCTGCCAACTTaGCTTCGTCAGGGTCTGATGCCCGGCCCACCCAGGCATACACGA +
Preference number: 1 (lower is better)
Translates to: CRRCQTWCSGCLLPT*LRQGLMPGPPRHTR
Trigger: TCGTGTATGCCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAACACCATGTTTGACACCTCCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 90 bp TCGATCTCCGTCAGGAAATGGATGGCTTCTGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAG +
Preference number: 1 (lower is better)
Translates to: SISVRKWMASGRVTR*FLFRTSFLSFGHLQ
Trigger: CTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATCCATTTCCTGACGGAGATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp ACGTGTGTGTTTCATGTACTCGGCATCGTCATCATAGGGCTTCTGTaGCCCAATGCCCACCCAGAAGAAGTTCTCAGGCTCCTCACCTTC +
Preference number: 1 (lower is better)
Translates to: TCVFHVLGIVIIGLL*PNAHPEEVLRLLTF
Trigger: GAAGGTGAGGAGCCTGAGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGCCCTATGATGACGATGCCGAGTACATGAAACACACACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 90 bp ATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTTGGAGCACCGGAAGAGACGTGTGTG +
Preference number: 1 (lower is better)
Translates to: ICQVILAKVGAFLSH*KVALLVGAPEETCV
Trigger: CACACACGTCTCTTCCGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 90 bp GGGTCCCCACCCACATGTAGACCTCTTGGCCATTGTCTAGCAACATaGTGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATT +
Preference number: 1 (lower is better)
Translates to: GSPPTCRPLGHCLAT*CHHLPGHLGKSRSI
Trigger: AATGCTCCGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGGCCAAGAGGTCTACATGTGGGTGGGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp GAGGGCGGCAGCGCGCACCAGGCGCGGGGACTTGCGGCCGAGCCAGATGAACACGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: EGGSAHQARGLAAEPDEHDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...GTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp CTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 2 (lower is better)
Translates to: LADQAQPARPLMFLGPHVVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...CACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp AAGGCGCTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCC +
Preference number: 2 (lower is better)
Translates to: KALQAWKQRVKACCS*PLRTRRSRRGRSCS
Trigger: GGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR TCA 90 bp GGCGTGCTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 2 (lower is better)
Translates to: GVLLIALADQAQPARPLMPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...CATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp GCTGCGGCTGACCGTGGCATGGCGTGGCCGGTGCAGCATCCCGCACAGCTCCTGTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: AAADRGMAWPVQHPAQLLSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...CAGGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGCCACGGTCAGCCGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp CTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGAC +
Preference number: 2 (lower is better)
Translates to: LQAWKQRVKACCSLP*RTRRSRRGRSCSLD
Trigger: GTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTGCTTCCACGCCTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp GAGGGCGGCAGCGCGCACCAGGCGCGGGGACTTGCGGCCGAGCCAGATGAACACCAAAGAGCCTGGCCTTaGTGGTGCTGCTCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: EGGSAHQARGLAAEPDEHQRAWP*WCCSVW
Trigger: CCACACTGAGCAGCACCACCAAGGCCAGGCTCTTTG...GTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp ATCGCTGGGAGCTGCCGGAGCTGTGCATGCAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGGTGCACCAGGCGGCGCATCTGCGGG +
Preference number: 2 (lower is better)
Translates to: IAGSCRSCACSRGFP*STSVCRCTRRRICG
Trigger: CCCGCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACAGCTCCGGCAGCTCCCAGCGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATAGGCGTGCTGCTCATTaGCCTTGCGGACCAGGCGCA +
Preference number: 2 (lower is better)
Translates to: DQAQPARPLMFLGPHVLDRRAAH*PCGPGA
Trigger: TGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCT...ATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp CTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LLIALADQAQPARPLMFLGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...AAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CCA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR CAA 90 bp GAGGCACCCGCTAGCCGCAGCTGGTTCTGCAGCGAGAAGTCGATGTaGTACCACTCAGCGGCACGGTCTGCGGGCTTGGGCGGCATGACC +
Preference number: 2 (lower is better)
Translates to: EAPASRSWFCSEKSM*YHSAARSAGLGGMT
Trigger: GGTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGCTGCGGCTAGCGGGTGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GGCGGCCAGAAGTCTTCAGGCACGTGCTTCTTGATCTCAGAGGGCTCCCCACCCGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: GGQKSSGTCFLISEGSPPGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...GGGTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTTCTGGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GGCTGCTTCTCCTCTGCCTCAGCGGTTGCTTCCTCGCCTTCTTTGCCCTCGGCCCTTGGGCCCACTCCCTaGAGCTGCAGCTGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: GCFSSASAVASSPSLPSALGPTP*SCSCSH
Trigger: GTGGCTGCAGCTGCAGCTGCAGGGAGTGGGCCCAAG...GGCCGAGGGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR CAA 90 bp GCCTGGTCATCCTGGGCTGAATCCTTGCGCCTCCGCAGTCGCATCTaGCGAGCCATAGGGTCCTTGGGCCCACTCCCTGCAGCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: AWSSWAESLRLRSRI*RAIGSLGPLPAAAA
Trigger: AGCTGCAGCTGCAGGGAGTGGGCCCAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp GGCTGCTTCTCCTCTGCCTCAGCGGTTGCTTCCTCGCCTTCTTTGCCCTCGGCCCTGGTCATCCTGGGCTaGATCCTTGCGCCTCCGCAG +
Preference number: 2 (lower is better)
Translates to: GCFSSASAVASSPSLPSALVILG*ILAPPQ
Trigger: CTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAG...GGCCGAGGGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GCTGGTTCTGCAGCGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 2 (lower is better)
Translates to: AGSAARSRCCTTQRHGLRAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...CCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: GRVYRHSGTRVRSLQDRSGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...GGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CCA 90 bp GCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: AGWGGCTDTRAPVSGHCRSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...CCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR CAA 90 bp TACCACTCAGCGGCACGGTCTGCGGGCTTGGGCGGCATGACCAGGTaGGGGTTCTCCCGCACATCCAGGACCTCGATCTCCGTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: YHSAARSAGLGGMTR*GFSRTSRTSISVRK
Trigger: TTTCCTGACGGAGATCGAGGTCCTGGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp AGCGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGGCTaGGGCGGCATGACCAGGTTGGGGTTCTCCCGCACATCCAGGACC +
Preference number: 2 (lower is better)
Translates to: SEKSMLYHSAARSAG*GGMTRLGFSRTSRT
Trigger: GGTCCTGGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GTGCCAGCCTGTCTTAGGCCAGGGCCTTGCAGAAGGCGCTCCAGGCGTGGAAGCGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 2 (lower is better)
Translates to: VPACLRPGPCRRRSRRGSGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...GCTTCCACGCCTGGAGCGCCTTCTGCAAGGCCCTGGCCTAAGACAGGCTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR GCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 2 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp ACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: TCTHWSMHRDSSVIWLLLGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...CAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CCA 90 bp CTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATAT +
Preference number: 2 (lower is better)
Translates to: LADQAQPARPLMFLGPHVAAHVP*TACAGY
Trigger: ATATCCAGCACATGCGGTCCAAGGAACATGAGCGGC...CACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp TATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCAGTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: YAQGQLRDLVAAEVEAAQLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...CTGCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CCA 90 bp GGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 2 (lower is better)
Translates to: GCTDTRAPVSGHCRTDPRVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...ACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CCA 90 bp CGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGCGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 2 (lower is better)
Translates to: RDRFRVSTCTHWSMHRDSVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...GCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CCA 90 bp GACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATGCTCCCCATGAAGCGTaGTCAGGTTGTTGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: DQAQPARPLMFLGPHVLDAPHEA*SGCCGS
Trigger: TGAGCCACAACAACCTGACCACGCTTCATGGGGAGC...ATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp ATGCCCTTCAGCACCTGCTTGGCCTGGTCATCCTGGGCTGAATCCTaGCGCCTCCGCAGTCGCATCTTGCGAGCCATAGGGTCCTTGGGC +
Preference number: 2 (lower is better)
Translates to: MPFSTCLAWSSWAES*RLRSRILRAIGSLG
Trigger: GCCCAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp CTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGTCCTTGGACCGCATGTaGTGGATATATACCTGGCAG +
Preference number: 2 (lower is better)
Translates to: LADQAQPARPLMFLGPHVSLDRM*WIYTWQ
Trigger: CTGCCAGGTATATATCCAGCACATGCGGTCCAAGGA...CACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR GCA 90 bp CGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGACCCTCCGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 2 (lower is better)
Translates to: RVRSLQDRSTSARLLRPSAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...GGAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR GCA 90 bp GGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 2 (lower is better)
Translates to: GCTDTRAPVSGHCRTDPRAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...ACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR GCA 90 bp TCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: SMHRDSSVIWLLLRLRRRPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...GCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR GCA 90 bp CTTGCAGAAGGCGCTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTGCTGCTCATTCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: LAEGAPGVEAAGKGVLLIPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...AATGAGCAGCACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGCCTTCTGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp CTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGGTTCAGGATGTCTTCTaGCAACTTGGCTTCGTCAGG +
Preference number: 2 (lower is better)
Translates to: LADQAQPARPLMFLGPHVVQDVF*QLGFVR
Trigger: CCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAAC...CACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATGCTTCTGTGCCCCAATaGCCACCCAGAAGAAGTTCT +
Preference number: 2 (lower is better)
Translates to: DQAQPARPLMFLGPHVLDASVPQ*PPRRSS
Trigger: AGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGC...ATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 2 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp TCCACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: STCTHWSMHRDSSVIWLLDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...CAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR TCA 90 bp GCTGGTTCTGCAGCGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGGATTTCCCAGACCCCTaGGGGCACCTGTCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: AGSAARSRCCTTQRHGLRDFPDP*GHLSGS
Trigger: TGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATC...CCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp GGCGGCCAGAAGTCTTCAGGCACGTGCTTCTTGATCTCAGAGGGCTCCCCACCCCTGAGGGCAGTGAGGTaGGCTGATTTCGGGACAGGT +
Preference number: 2 (lower is better)
Translates to: GGQKSSGTCFLISEGSPPLRAVR*ADFGTG
Trigger: ACCTGTCCCGAAATCAGCTCACCTCACTGCCCTCAG...GGGTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTTCTGGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp TCCACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: STCTHWSMHRDSSVIWLLPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...CAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR GCA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGTCAGCTTGCTCAGCTTaGAAATGGCTGAGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLSACSA*KWLRAV
Trigger: CACTGCCCTCAGCCATTTGCAAGCTGAGCAAGCTGA...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR GCA 90 bp GACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATAAGTCTTCAGGCACGTaGTTCTTGATCTCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: DQAQPARPLMFLGPHVLDKSSGT*FLISEG
Trigger: GCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTT...ATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 2 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGTTGGACCGCATGTGCTaGATATATACCTGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLLDRMC*IYTWQA
Trigger: GGCCTGCCAGGTATATATCCAGCACATGCGGTCCAA...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp CACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: HPLVYAQGQLRDLVAAEVLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...AACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR TCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGATTTCCCAGACCCCTaGGGGCACCTGTCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: GESWISQTPEGTCQGHPHDFPDP*GHLSGS
Trigger: TGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR TCA 90 bp GGCGGCCAGAAGTCTTCAGGCACGTGCTTCTTGATCTCAGAGGGCTCCCCACCCGGCTGGTCATGGCCTTaGCATTCTCAGGGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: GGQKSSGTCFLISEGSPPGWSWP*HSQGSS
Trigger: GCTACTTCCCTGAGAATGTCAAGGCCATGACCAGCC...GGGTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTTCTGGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp CCTTCTCGTTGGAGCACCGGAAGAGACGTGTGTGTTTCATGTACTCGGCATCGTCGGGCTTGGGCGGCATaGCCAGGTTGGGGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: PSRWSTGRDVCVSCTRHRRAWAA*PGWGSP
Trigger: GGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCG...ACGATGCCGAGTACATGAAACACACACGTCTCTTCCGGTGCTCCAACGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 2 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR GCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 2 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR GCA 90 bp CCAGCCCATATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAATCTCCTCCCGGACAGTaGGGCACTCAGCACCCAGGT +
Preference number: 2 (lower is better)
Translates to: PAHIGGFTALPEVHDALESPPGQ*GTQHPG
Trigger: ACCTGGGTGCTGAGTGCCGCACTGTCCGGGAGGAGA...TTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATATGGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp CCTCTTGAAATGGGACAGGAACTTGGGGTTCTCCTGCTGCTGCGTCATGCGTACGAGAGACCCGGGCTCTaGAGCACGGCCTCCGCATTG +
Preference number: 2 (lower is better)
Translates to: PLEMGQELGVLLLLRHAYERPGL*STASAL
Trigger: CAATGCGGAGGCCGTGCTGCAGAGCCCGGGTCTCTC...GTACGCATGACGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTTCAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 2 (lower is better)
Translates to: SHCGESWISQTPEGTCQGGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 2 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: HTCTHTVERVGFPRPLRAGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp TGTGCATGCAGCAGGGGGTTTCCATTGAGCACGAGCGTCTGCAGGTGCACCAGGAGCTTGATCTCCACCTaGCTAGTCTGGGTCCCCACC +
Preference number: 2 (lower is better)
Translates to: CACSRGFPLSTSVCRCTRSLIST*LVWVPT
Trigger: GGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCT...CCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp TTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: FRDRFRVSTCTHWSMHRDLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...GTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CCA 90 bp TTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: FGTGSEFPRAPTGLCTGTDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...TGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CCA 90 bp CCTTCTCGTTGGAGCACCGGAAGAGACGTGTGTGTTTCATGTACTCGGCATCGTCGGCTGACCGTGGCATaGCGTGGCCGGTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: PSRWSTGRDVCVSCTRHRRLTVA*RGRCSI
Trigger: GATGCTGCACCGGCCACGCCATGCCACGGTCAGCCG...ACGATGCCGAGTACATGAAACACACACGTCTCTTCCGGTGCTCCAACGAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp TTGTTCTTCTCCTGGGCAACATCTGACATGCCCTTCAGCACCTGCTaGGCCTGGTCATCCTGGGCTGAATCCTTGCGCCTCCGCAGTCGC +
Preference number: 2 (lower is better)
Translates to: LFFSWATSDMPFSTC*AWSSWAESLRLRSR
Trigger: GCGACTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAGAAGAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGALADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
3UTR-3UTR TCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 2 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR TCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 2 (lower is better)
Translates to: GASHVHSHCGESWISQTPPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR GCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 2 (lower is better)
Translates to: GESWISQTPEGTCQGHPHGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR GCA 90 bp GGTGAGCTGATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 2 (lower is better)
Translates to: GELISGQVQSFHVHPLVYAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...ATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAATCAGCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR GCA 90 bp GGCTGCTTCTCCTCTGCCTCAGCGGTTGCTTCCTCGCCTTCTTTGCCCTCGGCCTCGTTGTCAAACACCTaGAGGAACTCCTCGCTCTCA +
Preference number: 2 (lower is better)
Translates to: GCFSSASAVASSPSLPSASLSNT*RNSSLS
Trigger: TGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAACGA...GGCCGAGGGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTAACTTGGGGTTCTCCTaGTGCTGCGTCATGCGTACC +
Preference number: 2 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAANLGFS*CCVMRT
Trigger: GGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTT...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 2 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 2 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp GCAGTCAGCCTCGTAGAACTTGCCGTGGAAGGCTTCCTCCACCAGCACAGGCACCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 2 (lower is better)
Translates to: AVSLVELAVEGFLHQHRHQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...GTGCCTGTGCTGGTGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp TCAGCGGTTGCTTCCTCGCCTTCTTTGCCCTCGGCCTTCTCCTCCTaGTCTTCCTTCTTTTCCTCCTCCTCGTACTCCACAGGCACCCAG +
Preference number: 2 (lower is better)
Translates to: SAVASSPSLPSAFSS*SSFFSSSSYSTGTQ
Trigger: CTGGGTGCCTGTGGAGTACGAGGAGGAGGAAAAGAAGGAAGACAAGGAGGAGAAGGCCGAGGGCAAAGAAGGCGAGGAAGCAACCGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp TCTGGCTGCTTCTCCTCTGCCTCAGCGGTTGCTTCCTCGCCTTCTTaGCCCTCGGCCTTCTCCTCCTTGTCTTCCTTCTTTTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SGCFSSASAVASSPS*PSAFSSLSSFFSSS
Trigger: GGAGGAGGAAAAGAAGGAAGACAAGGAGGAGAAGGCCGAGGGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp CCCTGGACCGCCTTCCTCTTGCCCCGGTGGATGATGAACTTCCTCTaGAAATGGGACAGGAACTTGGGGTTCTCCTGCTGCTGCGTCATG +
Preference number: 2 (lower is better)
Translates to: PWTAFLLPRWMMNFL*KWDRNLGFSCCCVM
Trigger: CATGACGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCATCCACCGGGGCAAGAGGAAGGCGGTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp TCAGGGTCTGATGCCCGGCCCACCCAGGCATACACGATGCCCTGGTaGTCCTCACTCTCAAAGGGAACCTTGAGGATGAAGCAGAACTCG +
Preference number: 2 (lower is better)
Translates to: SGSDARPTQAYTMPW*SSLSKGTLRMKQNS
Trigger: CGAGTTCTGCTTCATCCTCAAGGTTCCCTTTGAGAGTGAGGACAACCAGGGCATCGTGTATGCCTGGGTGGGCCGGGCATCAGACCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: THTVERVGFPRPLRAPVRLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
3UTR-3UTR TCA 90 bp CCAGCCCATATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAACTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: PAHIGGFTALPEVHDALELADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...TTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATATGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 2 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR TCA 90 bp TTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACACCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 2 (lower is better)
Translates to: FGTGSEFPRAPTGLCTGTPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...TGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp GGCTGCTTCTCCTCTGCCTCAGCGGTTGCTTCCTCGCCTTCTTTGCCCTCGGCCAGAGATCATCTAGCTTaGAGATGTCATCGGGGACTC +
Preference number: 2 (lower is better)
Translates to: GCFSSASAVASSPSLPSARDHLA*RCHRGL
Trigger: GAGTCCCCGATGACATCTTCAAGCTAGATGATCTCT...GGCCGAGGGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 2 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp CACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 2 (lower is better)
Translates to: HPLVYAQGQLRDLVAAEVGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...AACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: ASHVHSHCGESWISQTPELWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp CCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGCCTTCAGCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: PLMFLGPHVLDIYLAGLQLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...CTGAAGGCCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp CCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGACGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: PGGSCSGQVSSALGTCRDGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...GTCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTCACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 2 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp TGTGCATGCAGCAGGGGGTTTCCATTGAGCACGAGCGTCTGCAGGTGCACCAGGTGCTGGATATATACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: CACSRGFPLSTSVCRCTRCWIYT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTATATATCCAGCA...CCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp TGTGCATGCAGCAGGGGGTTTCCATTGAGCACGAGCGTCTGCAGGTGCACCAGGGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATAT +
Preference number: 2 (lower is better)
Translates to: CACSRGFPLSTSVCRCTRAAHVP*TACAGY
Trigger: ATATCCAGCACATGCGGTCCAAGGAACATGAGCGGC...CCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp ATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGATCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: ISGQVQSFHVHPLVYAQGSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...TCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CCA 90 bp GCTGGTTCTGCAGCGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGATCTCCGTCAGGAAATaGATGGCTTCTGGGAGGGTC +
Preference number: 2 (lower is better)
Translates to: AGSAARSRCCTTQRHGLRISVRK*MASGRV
Trigger: GACCCTCCCAGAAGCCATCCATTTCCTGACGGAGAT...CCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp CCAGCCCATATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAAAGTAGATCTCCCAGTTaGGGGAGCCGCTGTCATCCA +
Preference number: 2 (lower is better)
Translates to: PAHIGGFTALPEVHDALESRSPS*GSRCHP
Trigger: TGGATGACAGCGGCTCCCTCAACTGGGAGATCTACT...TTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATATGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp GTAGTCCACCGTCAACACATCGTCCCAATTCTTGAACTTGGCCTTGAACACCTGATCCCGCACAGCTCCTaGCCCAGCTTGAGGGCGGCA +
Preference number: 2 (lower is better)
Translates to: VVHRQHIVPILELGLEHLIPHSS*PSLRAA
Trigger: TGCCGCCCTCAAGCTGGGTCAGGAGCTGTGCGGGAT...CAGGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGTGTTGACGGTGGACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp CATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATTTCTCAGTGGCTTCGTCAGGGTCTaGTGCCCGGCCCACCCAGGC +
Preference number: 2 (lower is better)
Translates to: HDVIICQVILAKVGAFLSGFVRV*CPAHPG
Trigger: GCCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCC...ACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp TGGTTGTGGCTCAAGTCCAGGACTGAGAGATCATCTAGCTTGAAGATGTCATCGGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: WLWLKSRTERSSSLKMSSGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...CGATGACATCTTCAAGCTAGATGATCTCTCAGTCCTGGACTTGAGCCACAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp CCTTCTCGTTGGAGCACCGGAAGAGACGTGTGTGTTTCATGTACTCGGCATCGTCCTGGGCTGAATCCTTaGGCCTCCGCAGTCGCATCT +
Preference number: 2 (lower is better)
Translates to: PSRWSTGRDVCVSCTRHRPGLNP*ASAVAS
Trigger: AGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGG...ACGATGCCGAGTACATGAAACACACACGTCTCTTCCGGTGCTCCAACGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 2 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGACAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 2 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATCACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 2 (lower is better)
Translates to: GESWISQTPEGTCQGHPHHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGTCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 2 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGSARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp TACACGATGCCCTGGTTGTCCTCACTCTCAAAGGGAACCTTGAGGATGAAGCAGGCAGCGATGGCAGGCTaGACAGCTCCCCATGAAGCG +
Preference number: 2 (lower is better)
Translates to: YTMPWLSSLSKGTLRMKQAAMAG*TAPHEA
Trigger: CGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGC...CTGCTTCATCCTCAAGGTTCCCTTTGAGAGTGAGGACAACCAGGGCATCGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp TTGCCCCGGTGGATGATGAACTTCCTCTTGAAATGGGACAGGAACTaGGGGTTCTCCTGCTGCTGCGTCATGCGTACCACCTCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: LPRWMMNFLLKWDRN*GFSCCCVMRTTSSF
Trigger: GAAGCTGGAGGTGGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCATCCACCGGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp TCCTCACTCTCAAAGGGAACCTTGAGGATGAAGCAGAACTCGGAGTaGAGGAGGCTGGAGTCGGTGTTGATCTGGATGCACCGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: SSLSKGTLRMKQNSE*RRLESVLIWMHRVQ
Trigger: CTGCACCCGGTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCTTCATCCTCAAGGTTCCCTTTGAGAGTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
3UTR-3UTR TCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGGATTTCCCAGACCCCTaGGGGCACCTGTCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRDFPDP*GHLSGS
Trigger: TGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATC...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
3UTR-3UTR TCA 90 bp ACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGAGAGCTTGCCAATGCCTaGGGGCAGCCCGTCAAAGTC +
Preference number: 2 (lower is better)
Translates to: TRWFLFRTSFLSFGHLQRELANA*GQPVKV
Trigger: GACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTC...TCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
3UTR-3UTR TCA 90 bp GTAGTCCACCGTCAACACATCGTCCCAATTCTTGAACTTGGCCTTGAACACCTGCCAGAGAGGTCCCCTTaGGGGGCACAGGCTCCAACT +
Preference number: 2 (lower is better)
Translates to: VVHRQHIVPILELGLEHLPERSP*GAQAPT
Trigger: AGTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGG...CAGGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGTGTTGACGGTGGACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp CCCTTTCCGCTCATTCTTGTTAATTTTCTCTGCAAAGAGCCTGGCCTTGGTGGTACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGC +
Preference number: 2 (lower is better)
Translates to: PFPLILVNFLCKEPGLGGTSVCR*TRRRIC
Trigger: GCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGT...ACCACCAAGGCCAGGCTCTTTGCAGAGAAAATTAACAAGAATGAGCGGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 2 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGCATGGCGTGGCCGGTaGAGCATCCCGCACAGCTCC +
Preference number: 2 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVAWRGR*SIPHSS
Trigger: GGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGC...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp AGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGAGCACCGGAAGAGACGGGTTCTCCTGCTGCTaGGTCATGCGTACCACCTCC +
Preference number: 2 (lower is better)
Translates to: SISQSLQSSPSRWSTGRDGFSCC*VMRTTS
Trigger: GGAGGTGGTACGCATGACGCAGCAGCAGGAGAACCC...GTCTCTTCCGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCCACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 2 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGTCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 2 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVSARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTAGCTTGATCTCCACCTaGCTAGTCTGGGTCCCCACC +
Preference number: 2 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTSLIST*LVWVPT
Trigger: GGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCT...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
3UTR-3UTR CCA 90 bp TCCACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGGTGGTCAGGTTGTTGTaGCTCACAGACAAGTGTTCC +
Preference number: 2 (lower is better)
Translates to: STCTHWSMHRDSSVIWLLVVRLL*LTDKCS
Trigger: GGAACACTTGTCTGTGAGCCACAACAACCTGACCAC...CAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp CCAGCCCATATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAAGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGT +
Preference number: 2 (lower is better)
Translates to: PAHIGGFTALPEVHDALEGRVTR*FLFRTS
Trigger: ACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCC...TTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATATGGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp TTTGGGCACCTGCAGAGACTTTCAGGGACCAGCTCCAGGTTGTTGTaGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCT +
Preference number: 2 (lower is better)
Translates to: FGHLQRLSGTSSRLL*AAMNSSRLVSLPMP
Trigger: AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCTGGTCCCTGAAAGTCTCTGCAGGTGCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
3UTR CAA 90 bp AGCTTTGGGCACCTGCAGAGACTTTCAGGGACCAGCTCCAGGTTGTaGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATG +
Preference number: 2 (lower is better)
Translates to: SFGHLQRLSGTSSRL*LAAMNSSRLVSLPM
Trigger: CATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCTGGTCCCTGAAAGTCTCTGCAGGTGCCCAAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
3UTR CAA 90 bp TCGAACTTCTTTTGCAGGCTGAAGGTGAAGGTGAGCCAGCCCATATaGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAAG +
Preference number: 2 (lower is better)
Translates to: SNFFCRLKVKVSQPI*EASRPCQKYTMHWK
Trigger: CTTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATATGGGCTGGCTCACCTTCACCTTCAGCCTGCAAAAGAAGTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTGCAGGTGGTGTCACCTaGGTACATTCTTTGCTAGCA +
Preference number: 2 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILAGGVT*VHSLLA
Trigger: TGCTAGCAAAGAATGTACTCAGGTGACACCACCTGC...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
3UTR-3UTR TCA 90 bp ATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGAGGCTGGTCATGGCCTTaGCATTCTCAGGGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: ISGQVQSFHVHPLVYAQGGWSWP*HSQGSS
Trigger: GCTACTTCCCTGAGAATGTCAAGGCCATGACCAGCC...TCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp TACACGATGCCCTGGTTGTCCTCACTCTCAAAGGGAACCTTGAGGATGAAGCAGCCTGCACCAGCAGTGTaGTCTCAGCCTTCCCTTTCC +
Preference number: 2 (lower is better)
Translates to: YTMPWLSSLSKGTLRMKQPAPAV*SQPSLS
Trigger: GGAAAGGGAAGGCTGAGATCACACTGCTGGTGCAGG...CTGCTTCATCCTCAAGGTTCCCTTTGAGAGTGAGGACAACCAGGGCATCGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp GTAGTCCACCGTCAACACATCGTCCCAATTCTTGAACTTGGCCTTGAACACCTGTGCGGCCGAGCCAGATaGACACGTCGGACCAACAGT +
Preference number: 2 (lower is better)
Translates to: VVHRQHIVPILELGLEHLCGRAR*TRRTNS
Trigger: ACTGTTGGTCCGACGTGTTCATCTGGCTCGGCCGCA...CAGGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGTGTTGACGGTGGACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATAAGGGCATCCACATCTaGTTTATCCCTAGCGGAAGA +
Preference number: 2 (lower is better)
Translates to: GESWISQTPEGTCQGHPHKGIHI*FIPSGR
Trigger: TCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTT...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR GCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATCCTTGGACCGCATGTaGTGGATATATACCTGGCAG +
Preference number: 2 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGSLDRM*WIYTWQ
Trigger: CTGCCAGGTATATATCCAGCACATGCGGTCCAAGGA...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
3UTR-3UTR GCA 90 bp CCCTTTCCGCTCATTCTTGTTAATTTTCTCTGCAAAGAGCCTGGCCTTGGTGGTCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 2 (lower is better)
Translates to: PFPLILVNFLCKEPGLGGPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...ACCACCAAGGCCAGGCTCTTTGCAGAGAAAATTAACAAGAATGAGCGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGTGCTGGATATATACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: ASHVHSHCGESWISQTPECWIYT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTATATATCCAGCA...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
3UTR-3UTR CCA 90 bp AGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGAGCACCGGAAGAGACTTGGCCTGGTCATCCTaGGCTGAATCCTTGCGCCTC +
Preference number: 2 (lower is better)
Translates to: SISQSLQSSPSRWSTGRDLAWSS*AESLRL
Trigger: GAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAA...GTCTCTTCCGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp CATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATTTCTCAGTGGCTTCTCCAGGCCCTaGTCCCAACGCCGCACCTTC +
Preference number: 2 (lower is better)
Translates to: HDVIICQVILAKVGAFLSGFSRP*SQRRTF
Trigger: GAAGGTGCGGCGTTGGGACCAGGGCCTGGAGAAGCC...ACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp TCCGTCAGGAAATGGATGGCTTCTGGGAGGGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGACTT +
Preference number: 2 (lower is better)
Translates to: SVRKWMASGRVTRWF*FRTSFLSFGHLQRL
Trigger: AAGTCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATCCATTTCCTGACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 90 bp CCCTGCACCAGCAGTGTGATCTCAGCCTTCCCTTTCCGCTCATTCTaGTTAATTTTCTCTGCAAAGAGCCTGGCCTTGGTGGTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: PCTSSVISAFPFRSF*LIFSAKSLALVVLL
Trigger: GAGCAGCACCACCAAGGCCAGGCTCTTTGCAGAGAAAATTAACAAGAATGAGCGGAAAGGGAAGGCTGAGATCACACTGCTGGTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAAGGGCATCCACATCTaGTTTATCCCTAGCGGAAGA +
Preference number: 2 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASKGIHI*FIPSGR
Trigger: TCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTT...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
3UTR-3UTR GCA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTCCCTGCAGCTGCAGCTaGAGCCACGGTAGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVPCSCS*SHGSRR
Trigger: TCTCCTGCTACCGTGGCTGCAGCTGCAGCTGCAGGG...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp CTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGGCCGCGCAAACTTCTTaGCCTCCAGCACGAAACCCT +
Preference number: 2 (lower is better)
Translates to: LGKSRSISQSLQSSPSRWAAQTS*PPARNP
Trigger: AGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGC...CCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp CATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATTTCTCAGTGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: HDVIICQVILAKVGAFLSGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...ACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp AGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGAGCACCGGAAGAGACCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 2 (lower is better)
Translates to: SISQSLQSSPSRWSTGRDQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...GTCTCTTCCGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp CAGCTTGATCTCCACCTGGCTAGTCTGGGTCCCCACCCACATGTAGACCTCTTGTCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 2 (lower is better)
Translates to: QLDLHLASLGPHPHVDLLSARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...CAAGAGGTCTACATGTGGGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGATCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 2 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERSARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
3UTR-3UTR GCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR GCA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGTAGCAGAGGCCAGTaGGGTTCAGCTTCAGCCACC +
Preference number: 2 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVGSRGQ*GSASAT
Trigger: GGTGGCTGAAGCTGAACCGCACTGGCCTCTGCTACC...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTAAGTGTTCCAGCTTCTaGAGGGCGGCCAGCTCCTCG +
Preference number: 2 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVKCSSF*RAASSS
Trigger: CGAGGAGCTGGCCGCCCTGCAGAAGCTGGAACACTT...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp CCTTCTCGTTGGAGCACCGGAAGAGACGTGTGTGTTTCATGTACTCGGCATCGTAAGTCTTCAGGCACGTaGTTCTTGATCTCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: PSRWSTGRDVCVSCTRHRKSSGT*FLISEG
Trigger: GCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTT...ACGATGCCGAGTACATGAAACACACACGTCTCTTCCGGTGCTCCAACGAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp AGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGAGCACCGGAAGAGACAGGTCAGCCTTCATCTaGTCTTTCTTCTCGGCGTCG +
Preference number: 2 (lower is better)
Translates to: SISQSLQSSPSRWSTGRDRSAFI*SFFSAS
Trigger: CGACGCCGAGAAGAAAGACCAGATGAAGGCTGACCT...GTCTCTTCCGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp CCATTGTCTAGCAACATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGCTCCTGGGCAACATCTaGCATGCCCTTCAGCACCTG +
Preference number: 2 (lower is better)
Translates to: PLSSNMMSSSARSSWQKSLLGNI*HALQHL
Trigger: CAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAG...CGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCCATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
3UTR-3UTR GCA 90 bp AGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGAGCACCGGAAGAGACGTTCAGGATGTCTTCTaGCAACTTGGCTTCGTCAGG +
Preference number: 2 (lower is better)
Translates to: SISQSLQSSPSRWSTGRDVQDVF*QLGFVR
Trigger: CCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAAC...GTCTCTTCCGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp CCCTTTCCGCTCATTCTTGTTAATTTTCTCTGCAAAGAGCCTGGCCTTGGTGGTAATTCTTCAGACTGTTaGCTCGGGCCACGATGGCGC +
Preference number: 2 (lower is better)
Translates to: PFPLILVNFLCKEPGLGGNSSDC*LGPRWR
Trigger: GCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATT...ACCACCAAGGCCAGGCTCTTTGCAGAGAAAATTAACAAGAATGAGCGGAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTAGCACCTGCTTGGCCTaGTCATCCTGGGCTGAATCC +
Preference number: 2 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVSTCLA*SSWAES
Trigger: GGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCT...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR TCA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTAGTAGATCTCCCAGTTaGGGGAGCCGCTGTCATCCA +
Preference number: 2 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVSRSPS*GSRCHP
Trigger: TGGATGACAGCGGCTCCCTCAACTGGGAGATCTACT...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp CCCTTTCCGCTCATTCTTGTTAATTTTCTCTGCAAAGAGCCTGGCCTTGGTGGTTCAGCTTGCTCAGCTTaGAAATGGCTGAGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: PFPLILVNFLCKEPGLGGSACSA*KWLRAV
Trigger: CACTGCCCTCAGCCATTTGCAAGCTGAGCAAGCTGA...ACCACCAAGGCCAGGCTCTTTGCAGAGAAAATTAACAAGAATGAGCGGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp GTAGTCCACCGTCAACACATCGTCCCAATTCTTGAACTTGGCCTTGAACACCTGTCGTTGTCAAACACCTaGAGGAACTCCTCGCTCTCA +
Preference number: 2 (lower is better)
Translates to: VVHRQHIVPILELGLEHLSLSNT*RNSSLS
Trigger: TGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAACGA...CAGGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGTGTTGACGGTGGACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp CATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATTTCTCAGTAACTTGGGGTTCTCCTaGTGCTGCGTCATGCGTACC +
Preference number: 2 (lower is better)
Translates to: HDVIICQVILAKVGAFLSNLGFS*CCVMRT
Trigger: GGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTT...ACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CCA 90 bp CATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATTTCTCAGTTCTCTGCAAAGAGCCTaGCCTTGGTGGTGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: HDVIICQVILAKVGAFLSSLQRA*PWWCCS
Trigger: TGAGCAGCACCACCAAGGCCAGGCTCTTTGCAGAGA...ACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR GCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTCATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
3UTR-3UTR TCA 90 bp CCATTGTCTAGCAACATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGCATCCAGAAAGGTCTTaGGCACAATGTAGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: PLSSNMMSSSARSSWQKSHPERS*AQCSSQ
Trigger: CTGACTGCTACATTGTGCTCAAGACCTTTCTGGATG...CGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp GGTGCCCTCGAGGCTGCGGCTGACCGTGGCATGGCGTaGCCGGTGCAGCATCCCGCACAGCTCCTGACCCAG +
Preference number: 3 (lower is better)
Translates to: GALEAAADRGMA*PVQHPAQLLTQ
Trigger: CTGGGTCAGGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGCCACGGTCAGCCGCAGCCTCGAGGGCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp GCGCTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGC +
Preference number: 3 (lower is better)
Translates to: ALQAWKQRVKAC*SLPLRTRRSRR
Trigger: GCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR GCA 72 bp CTCTGGGTGCGCTGGGTGCTCCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGGAGCTGCCGGAGCTGT +
Preference number: 3 (lower is better)
Translates to: LWVRWVLRRCRV*RAVIAGSCRSC
Trigger: ACAGCTCCGGCAGCTCCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp GGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: GAGWGGCTDTRAPVSGHCRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...GCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CAA 90 bp GACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATGGCGGCATGACCAGGTaGGGGTTCTCCCGCACATCC +
Preference number: 3 (lower is better)
Translates to: DQAQPARPLMFLGPHVLDGGMTR*GFSRTS
Trigger: GGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCC...ATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp CTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGTCCAGAGAGGTCCCCTaGAGGGGCACAGGCTCCAAC +
Preference number: 3 (lower is better)
Translates to: LADQAQPARPLMFLGPHVSREVP*RGTGSN
Trigger: GTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGGA...CACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp AAGGCGCTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGG +
Preference number: 3 (lower is better)
Translates to: KALQAWKQRVKA*CSLPLRTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR CCA 72 bp AGAGGGCGCTGCCGTTGGTGCGGATCTGGTAGAGGCTaGGCTGTTGGGCGCCCTGGACCGCCTTCCTCTTGC +
Preference number: 3 (lower is better)
Translates to: RGRCRWCGSGRG*AVGRPGPPSSC
Trigger: GCAAGAGGAAGGCGGTCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 72 bp GCTGCCGGAGCTGTGCATGCAGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGTGCACCAGGCGGCGCA +
Preference number: 3 (lower is better)
Translates to: AAGAVHAAGGFH*ARASAGAPGGA
Trigger: TGCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACAGCTCCGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp ATGCCGTCTAGGTCTTCGTTCCACTCCTCCATCAGCTaGTCCGCCTCGGCCAGCGACATGGGCGGCTGCCGC +
Preference number: 3 (lower is better)
Translates to: MPSRSSFHSSIS*SASASDMGGCR
Trigger: GCGGCAGCCGCCCATGTCGCTGGCCGAGGCGGAGCAGCTGATGGAGGAGTGGAACGAAGACCTAGACGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp GATCCACGTCTGCGAGGTTGCTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGGTGCGCTGGGTGCTCC +
Preference number: 3 (lower is better)
Translates to: DPRLRGCSDPPG*WAGCSGCAGCS
Trigger: GGAGCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CAA 90 bp GCTGCGGCTGACCGTGGCATGGCGTGGCCGGTGCAGCATCCCGCACAGCTCCTGTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 3 (lower is better)
Translates to: AAADRGMAWPVQHPAQLLSGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...CAGGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGCCACGGTCAGCCGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp GGCGGCCAGAAGTCTTCAGGCACGTGCTTCTTGATCTCAGAGGGCTCCCCACCCAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: GGQKSSGTCFLISEGSPPRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...GGGTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTTCTGGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CAA 90 bp GGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: GAGWGGCTDTRAPVSGHCSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...GCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR TCA 72 bp CGCGCACCAGGCGCGGGGACTTGCGGCCGAGCCAGATaGACACGTCGGACCAACAGTCCAGAATGTACACGC +
Preference number: 3 (lower is better)
Translates to: RAPGAGTCGRAR*TRRTNSPECTR
Trigger: GCGTGTACATTCTGGACTGTTGGTCCGACGTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp CATCTTGCGAGCCATAGGGTCCTTGGGCCCACTCCCTaGAGCTGCAGCTGCAGCCACGGTAGCAGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: HLASHRVLGPTP*SCSCSHGSRRG
Trigger: GCCTCTCCTGCTACCGTGGCTGCAGCTGCAGCTGCAGGGAGTGGGCCCAAGGACCCTATGGCTCGCAAGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp GGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATATATACCTGGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: GPGAAGAAAHVP*TACAGYIPGRP
Trigger: AGGCCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR CCA 72 bp TGGCTCGGGCCACGATGGCGCGCAGCGATGGCAGGCTaGACAGCTCCCCATGAAGCGTGGTCAGGTTGTTGT +
Preference number: 3 (lower is better)
Translates to: WLGPRWRAAMAG*TAPHEAWSGCC
Trigger: ACAACAACCTGACCACGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCATCGTGGCCCGAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp GGCGCTGCCGTTGGTGCGGATCTGGTAGAGGCTGGGCTGTTGGGCGCCCTGGACCACTCTGTCAGCTGGTaGTGGCTCAAGTCCAGGACT +
Preference number: 3 (lower is better)
Translates to: GAAVGADLVEAGLLGALDHSVSW*WLKSRT
Trigger: AGTCCTGGACTTGAGCCACAACCAGCTGACAGAGTG...GTCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 72 bp GCTGCGGCGGCCAGAAGTCTTCAGGCACGTGCTTCTTaGTCTCAGAGGGCTCCCCACCCAGTGCCTCCCAGA +
Preference number: 3 (lower is better)
Translates to: AAAARSLQARAS*SQRAPHPVPPR
Trigger: TCTGGGAGGCACTGGGTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTTCTGGCCGCCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGGCCTTCAGGCTCAGCTaGATCTCCACCTGGCTAGTC +
Preference number: 3 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLAFRLS*ISTWLV
Trigger: GACTAGCCAGGTGGAGATCAAGCTGAGCCTGAAGGC...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp CGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGCAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: RDRFRVSTCTHWSMHRDSRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...GCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CAA 90 bp CACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: HPLVYAQGQLRDLVAAEVRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...AACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR TCA 72 bp GCGACATGGGCGGCTGCCGCGGCAGGAAAAGCGCAGTaGGGTCAGCCTTCATCTGGTCTTTCTTCTCGGCGT +
Preference number: 3 (lower is better)
Translates to: ATWAAAAAGKAQ*GQPSSGLSSRR
Trigger: ACGCCGAGAAGAAAGACCAGATGAAGGCTGACCTCACTGCGCTTTTCCTGCCGCGGCAGCCGCCCATGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTaGTTGAGGCTACTGGGGACTGTGGCACTGGACGTG +
Preference number: 3 (lower is better)
Translates to: PEGTCQGHPHWC*LRLLGTVALDV
Trigger: CACGTCCAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR GCA 72 bp GCTTCCTCCACCAGCACAGGCACGAAGTTCTCTATCTaGCAGATGGTCAGTCCGGGCAGCTGGCCCACGTCC +
Preference number: 3 (lower is better)
Translates to: ASSTSTGTKFSI*QMVSPGSWPTS
Trigger: GGACGTGGGCCAGCTGCCCGGACTGACCATCTGGCAGATAGAGAACTTCGTGCCTGTGCTGGTGGAGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp CGGAGAGACCCGGGCTCTGCAGCACGGCCTCCGCATTaGGTGTGTAGTCCACCGTCAACACATCGTCCCAAT +
Preference number: 3 (lower is better)
Translates to: RRDPGSAARPPH*VCSPPSTHRPN
Trigger: ATTGGGACGATGTGTTGACGGTGGACTACACACGCAATGCGGAGGCCGTGCTGCAGAGCCCGGGTCTCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp AGATGTCATCGGGGACTCCGGAATTCTTCAGACTGTTaGCTCGGGCCACGATGGCGCGCAGCGATGGCAGGC +
Preference number: 3 (lower is better)
Translates to: RCHRGLRNSSDC*LGPRWRAAMAG
Trigger: GCCTGCCATCGCTGCGCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTCCGGAGTCCCCGATGACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp CCAGCCCATATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAAAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 3 (lower is better)
Translates to: PAHIGGFTALPEVHDALEKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...TTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATATGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp GACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATCTCTCAAAGGGAACCTaGAGGATGAAGCAGAACTCG +
Preference number: 3 (lower is better)
Translates to: DQAQPARPLMFLGPHVLDLSKGT*RMKQNS
Trigger: CGAGTTCTGCTTCATCCTCAAGGTTCCCTTTGAGAG...ATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 72 bp ATGGCGCGCAGCGATGGCAGGCTGGACAGCTCCCCATaGAGCGTGGTCAGGTTGTTGTGGCTCACAGACAAG +
Preference number: 3 (lower is better)
Translates to: MARSDGRLDSSP*SVVRLLWLTDK
Trigger: CTTGTCTGTGAGCCACAACAACCTGACCACGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 72 bp CAGGATGTCTTCTGCCAACTTGGCTTCGTCAGGGTCTaGTGCCCGGCCCACCCAGGCATACACGATGCCCTG +
Preference number: 3 (lower is better)
Translates to: QDVFCQLGFVRV*CPAHPGIHDAL
Trigger: CAGGGCATCGTGTATGCCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp GTAGCAGGAGAGGCACCCGCTAGCCGCAGCTGGTTCTaGAGCGAGAAGTCGATGTTGTACCACTCAGCGGCA +
Preference number: 3 (lower is better)
Translates to: VAGEAPASRSWF*SEKSMLYHSAA
Trigger: TGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGCTGCGGCTAGCGGGTGCCTCTCCTGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp GGCCAAACTCCTCTTCCGGCAGCCGCGCAAACTTCTTaGCCTCCAGCACGAAACCCTCCATGCCGTCTAGGT +
Preference number: 3 (lower is better)
Translates to: GQTPLPAAAQTS*PPARNPPCRLG
Trigger: ACCTAGACGGCATGGAGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGCTGCCGGAAGAGGAGTTTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp GCCACGGTAGCAGGAGAGGCACCCGCTAGCCGCAGCTaGTTCTGCAGCGAGAAGTCGATGTTGTACCACTCA +
Preference number: 3 (lower is better)
Translates to: ATVAGEAPASRS*FCSEKSMLYHS
Trigger: TGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGCTGCGGCTAGCGGGTGCCTCTCCTGCTACCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp GCAGAACTCGGAGTTGAGGAGGCTGGAGTCGGTGTTGATCTGGATGCACCGGGTAGCCGCGCAAACTTCTaGCCCTCCAGCACGAAACCC +
Preference number: 3 (lower is better)
Translates to: AELGVEEAGVGVDLDAPGSRANF*PSSTKP
Trigger: GGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGCT...ACCCGGTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGT +
Preference number: 3 (lower is better)
Translates to: GASHVHSHCGES*ISQTPEGTCQG
Trigger: ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CAA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 3 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAASGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CAA 90 bp TTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: FRDRFRVSTCTHWSMHRDSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...GTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CAA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 3 (lower is better)
Translates to: GESWISQTPEGTCQGHPHSGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CAA 90 bp GTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: VTRWFLFRTSFLSFGHLQSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...CTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp ACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 3 (lower is better)
Translates to: TCTHWSMHRDSSVIWLLLTRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...CAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR TCA 72 bp TGGGACGCTGCTTATGTTCCACGGAGAGCTTGTAGTTaGTCTGTGGCAGCTCCAGGTAGCCCAAGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: WDAAYVPRRACS*SVAAPGSPSPG
Trigger: GCCTGGGCTTGGGCTACCTGGAGCTGCCACAGATCAACTACAAGCTCTCCGTGGAACATAAGCAGCGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp CAGAAGTACACGATGCACTGGAAGTCCTCCTCTGGCTaGTTCTCCTCTGCCTCAGCGGTTGCTTCCTCGCCT +
Preference number: 3 (lower is better)
Translates to: QKYTMHWKSSSG*FSSASAVASSP
Trigger: AGGCGAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTTCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp CTCTTGAAATGGGACAGGAACTTGGGGTTCTCCTGCTaGTGCGTCATGCGTACCACCTCCAGCTTCCCAGGG +
Preference number: 3 (lower is better)
Translates to: LLKWDRNLGFSC*CVMRTTSSFPG
Trigger: CCCTGGGAAGCTGGAGGTGGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTTCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp TCCCGCACATCCAGGACCTCGATCTCCGTCAGGAAATaGATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTG +
Preference number: 3 (lower is better)
Translates to: SRTSRTSISVRK*MASGRVTRWFL
Trigger: CAAGAACCACCTGGTGACCCTCCCAGAAGCCATCCATTTCCTGACGGAGATCGAGGTCCTGGATGTGCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp TGTTGGGCGCCCTGGACCGCCTTCCTCTTGCCCCGGTaGATGATGAACTTCCTCTTGAAATGGGACAGGAAC +
Preference number: 3 (lower is better)
Translates to: CWAPWTAFLLPR*MMNFLLKWDRN
Trigger: GTTCCTGTCCCATTTCAAGAGGAAGTTCATCATCCACCGGGGCAAGAGGAAGGCGGTCCAGGGCGCCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp TCTGATGCCCGGCCCACCCAGGCATACACGATGCCCTaGTTGTCCTCACTCTCAAAGGGAACCTTGAGGATG +
Preference number: 3 (lower is better)
Translates to: SDARPTQAYTMP*LSSLSKGTLRM
Trigger: CATCCTCAAGGTTCCCTTTGAGAGTGAGGACAACCAGGGCATCGTGTATGCCTGGGTGGGCCGGGCATCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 3 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGSGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CAA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCATCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 3 (lower is better)
Translates to: HTCTHTVERVGFPRPLRASGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR-3UTR CAA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGCCTTCAGGCTCAGCTaGATCTCCACCTGGCTAGTC +
Preference number: 3 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRAFRLS*ISTWLV
Trigger: GACTAGCCAGGTGGAGATCAAGCTGAGCCTGAAGGC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
3UTR-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTCACTCTGTCAGCTGGTaGTGGCTCAAGTCCAGGACT +
Preference number: 3 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILHSVSW*WLKSRT
Trigger: AGTCCTGGACTTGAGCCACAACCAGCTGACAGAGTG...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 72 bp CAGTGCGGCACTCAGCACCCAGGTAGTTGCGCAAGTTaGCAGCGTGGATGGCAGAGCAAGCTTTCTTGTCGA +
Preference number: 3 (lower is better)
Translates to: QCGTQHPGSCAS*QRGWQSKLSCR
Trigger: TCGACAAGAAAGCTTGCTCTGCCATCCACGCTGTCAACTTGCGCAACTACCTGGGTGCTGAGTGCCGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp GCGCAAACTTCTTGCCCTCCAGCACGAAACCCTCCATaGCGTCTAGGTCTTCGTTCCACTCCTCCATCAGCT +
Preference number: 3 (lower is better)
Translates to: AQTSCPPARNPP*RLGLRSTPPSA
Trigger: AGCTGATGGAGGAGTGGAACGAAGACCTAGACGGCATGGAGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp TATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATaGACTGGAAGTCCTCCTCTGGCTGCTTCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: YWRLHGPARSTR*TGSPPLAASPL
Trigger: CAGAGGAGAAGCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp AAGGTGAGCCAGCCCATATTGGAGGCTTCACGGCCCTaGCAGAAGTACACGATGCACTGGAAGTCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: KVSQPILEASRP*QKYTMHWKSSS
Trigger: AGAGGAGGACTTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATATGGGCTGGCTCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp TTGAAATGGGACAGGAACTTGGGGTTCTCCTGCTGCTaGGTCATGCGTACCACCTCCAGCTTCCCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: LKWDRNLGFSCC*VMRTTSSFPGK
Trigger: CTTCCCTGGGAAGCTGGAGGTGGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp CAGCGTGGATGGCAGAGCAAGCTTTCTTGTCGAGTGTaGCCTCCCCGCCAATCCAGTAGTAGATCTCCCAGT +
Preference number: 3 (lower is better)
Translates to: QRGWQSKLSCRV*PPRQSSSRSPS
Trigger: ACTGGGAGATCTACTACTGGATTGGCGGGGAGGCCACACTCGACAAGAAAGCTTGCTCTGCCATCCACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp TGTCAAACATGGTGTTCAGGATGTCTTCTGCCAACTTaGCTTCGTCAGGGTCTGATGCCCGGCCCACCCAGG +
Preference number: 3 (lower is better)
Translates to: CQTWCSGCLLPT*LRQGLMPGPPR
Trigger: CCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAACACCATGTTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp CCATTGTCTAGCAACATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGCACGGTCTGCGGGCTaGGGCGGCATGACCAGGTTG +
Preference number: 3 (lower is better)
Translates to: PLSSNMMSSSARSSWQKSARSAG*GGMTRL
Trigger: CAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGC...CGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp CCTGCTTTTTGTTCTTCTCCTGGGCAACATCTGACATaGCCTTCAGCACCTGCTTGGCCTGGTCATCCTGGG +
Preference number: 3 (lower is better)
Translates to: PAFCSSPGQHLT*PSAPAWPGHPG
Trigger: CCCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAGAAGAACAAAAAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR GCA 72 bp ACTCGGCATCGTCATCATAGGGCTTCTGTGCCCCAATaGCCACCCAGAAGAAGTTCTCAGGCTCCTCACCTT +
Preference number: 3 (lower is better)
Translates to: TRHRHHRASVPQ*PPRRSSQAPHL
Trigger: AAGGTGAGGAGCCTGAGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGCCCTATGATGACGATGCCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp TTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTaGTCTATGCACAGGGACAGCTCCGTGATCTGGTTG +
Preference number: 3 (lower is better)
Translates to: FRDRFRVSTCTH*SMHRDSSVIWL
Trigger: CAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR CCA 72 bp TCTGCAGCAGCCGCATTCTTGGCATCAGCTCCACCTTaGGACGCTGCTTATGTTCCACGGAGAGCTTGTAGT +
Preference number: 3 (lower is better)
Translates to: SAAAAFLASAPP*DAAYVPRRACS
Trigger: ACTACAAGCTCTCCGTGGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTGCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp CTCTTGCCCCGGTGGATGATGAACTTCCTCTTGAAATaGGACAGGAACTTGGGGTTCTCCTGCTGCTGCGTC +
Preference number: 3 (lower is better)
Translates to: LLPRWMMNFLLK*DRNLGFSCCCV
Trigger: GACGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCATCCACCGGGGCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp CCATTGTCTAGCAACATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 3 (lower is better)
Translates to: PLSSNMMSSSARSSWQKSKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...CGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CAA 90 bp GGTGAGCTGATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 3 (lower is better)
Translates to: GELISGQVQSFHVHPLVYTRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...ATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAATCAGCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
3UTR-3UTR CAA 90 bp TACACGATGCCCTGGTTGTCCTCACTCTCAAAGGGAACCTTGAGGATGAAGCAGAGCGAGAAGTCGATGTaGTACCACTCAGCGGCACGG +
Preference number: 3 (lower is better)
Translates to: YTMPWLSSLSKGTLRMKQSEKSM*YHSAAR
Trigger: CCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCT...CTGCTTCATCCTCAAGGTTCCCTTTGAGAGTGAGGACAACCAGGGCATCGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 72 bp CTCCTCCTGCTTTTTGTTCTTCTCCTGGGCAACATCTaGCATGCCCTTCAGCACCTGCTTGGCCTGGTCATC +
Preference number: 3 (lower is better)
Translates to: LLLLFVLLLGNI*HALQHLLGLVI
Trigger: GATGACCAGGCCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAGAAGAACAAAAAGCAGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 3 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CAA 90 bp TCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 3 (lower is better)
Translates to: SGQVQSFHVHPLVYAQGQICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...CTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 3 (lower is better)
Translates to: THTVERVGFPRPLRAPVRICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR GCA 72 bp TTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTaGACTCACACTGTGGAGAGAGTTGGATTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: FIPSGRVRGLHT*THTVERVGFPR
Trigger: TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR GCA 72 bp TTTCATGTACTCGGCATCGTCATCATAGGGCTTCTGTaGCCCAATGCCCACCCAGAAGAAGTTCTCAGGCTC +
Preference number: 3 (lower is better)
Translates to: FHVLGIVIIGLL*PNAHPEEVLRL
Trigger: GAGCCTGAGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGCCCTATGATGACGATGCCGAGTACATGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp TCCAGGTATAGTAGGTCAGTGAGGTTGATGAAGAGCTaGTTGGGGATGGTGTCGATGCTGTTGTGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: SRYSRSVRLMKS*LGMVSMLLWLR
Trigger: CCTCAGCCACAACAGCATCGACACCATCCCCAACCAGCTCTTCATCAACCTCACTGACCTACTATACCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp GTCAGGAAATGGATGGCTTCTGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: VRKWMASGRVTR*FLFRTSFLSFG
Trigger: CCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATCCATTTCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp CATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATTTCTCAGTGCAGCAGCCGCATTCTaGGCATCAGCTCCACCTTGG +
Preference number: 3 (lower is better)
Translates to: HDVIICQVILAKVGAFLSAAAAF*ASAPPW
Trigger: CCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTGC...ACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR-3UTR CAA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 3 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
3UTR-3UTR CAA 90 bp CCATTGTCTAGCAACATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGCCTTCAGGCTCAGCTaGATCTCCACCTGGCTAGTC +
Preference number: 3 (lower is better)
Translates to: PLSSNMMSSSARSSWQKSAFRLS*ISTWLV
Trigger: GACTAGCCAGGTGGAGATCAAGCTGAGCCTGAAGGC...CGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR TCA 72 bp TGTGGCTCAAGTCCAGGACTGAGAGATCATCTAGCTTaGAGATGTCATCGGGGACTCCGGAATTCTTCAGAC +
Preference number: 3 (lower is better)
Translates to: CGSSPGLRDHLA*RCHRGLRNSSD
Trigger: GTCTGAAGAATTCCGGAGTCCCCGATGACATCTTCAAGCTAGATGATCTCTCAGTCCTGGACTTGAGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR TCA 72 bp CCCACATGTAGACCTCTTGGCCATTGTCTAGCAACATaGTGTCATCATCTGCCAGGTCATCTTGGCAAAAGT +
Preference number: 3 (lower is better)
Translates to: PTCRPLGHCLAT*CHHLPGHLGKS
Trigger: ACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGGCCAAGAGGTCTACATGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR-3UTR CAA 90 bp CATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATTTCTCAGTTCAAAGTCCAGCTTGTaGGAATTCAGGTACAGCTTC +
Preference number: 3 (lower is better)
Translates to: HDVIICQVILAKVGAFLSSKSSL*EFRYSF
Trigger: GAAGCTGTACCTGAATTCCAACAAGCTGGACTTTGA...ACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CCA 72 bp TCTAGCAACATGATGTCATCATCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAG +
Preference number: 3 (lower is better)
Translates to: SSNMMSSSARSS*QKSEHFSVTAK
Trigger: CTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GAGGGCGGCAGCGCGCACCAGGCGCGGGGACTTGCGGCCGAGCCAGATGAACACCCTCGGCCAGCGACATaGGCGGCTGCCGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: EGGSAHQARGLAAEPDEHPRPAT*AAAAAG
Trigger: TCCTGCCGCGGCAGCCGCCCATGTCGCTGGCCGAGG...GTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 72 bp CAGGCGTGGAAGCAGCGGGTAAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: QAWKQRVKACCS*PLRTRRSRRGR
Trigger: GCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTGCTTCCACGCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR TCA 90 bp GCTGGTGGGCAGGTTGCTCTGGGTGCGCTGGGTGCTCCGCAGGTGCAGGGTCTGGGCTTCGTCAGGGTCTaGTGCCCGGCCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGGQVALGALGAPQVQGLGFVRV*CPAHPG
Trigger: GCCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCC...CAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCACCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GAGGGCGGCAGCGCGCACCAGGCGCGGGGACTTGCGGCCGAGCCAGATGAACACTTGAGCACGAGCGTCTaGAGGTGCACCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: EGGSAHQARGLAAEPDEHLSTSV*RCTRRR
Trigger: GCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAA...GTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCGCTGCCGTTGGTGCGGATCTGGTAGAGGCTGGGCTGTTGGGCGCCCTGGACCGGGCTTGGGCGGCATaGCCAGGTTGGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GAAVGADLVEAGLLGALDRAWAA*PGWGSP
Trigger: GGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCG...GTCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GCTGCGGCTGACCGTGGCATGGCGTGGCCGGTGCAGCATCCCGCACAGCTCCTGGGGTGCAGAGGGCGCTaGCGTTGGTGCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: AAADRGMAWPVQHPAQLLGCRGR*RWCGSG
Trigger: ACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCC...CAGGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGCCACGGTCAGCCGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GCTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: AAHCPCGPGAAGAAAHVPAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...AGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GGAGWGGCTDTRAPVSGHWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...ATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp CTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LADQAQPARPLMFLGPHVAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...CACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GCTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTCCCACTCCCTGCAGCTaGAGCTGCAGCCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: AAHCPCGPGAAGAAAHVPPTPCS*SCSHGS
Trigger: GCTACCGTGGCTGCAGCTGCAGCTGCAGGGAGTGGG...AGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGAGCGACATGGGCGGCTaGCGCGGCAGGAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: LADQAQPARPLMFLGPHVSDMGG*RGRKSA
Trigger: TGCGCTTTTCCTGCCGCGGCAGCCGCCCATGTCGCT...CACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCCAGGGCCTTGCAGAAGGCGCTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTGGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GQGLAEGAPGVEAAGKGVAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...CACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGCCTTCTGCAAGGCCCTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR GCA 90 bp AGGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCAGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: RRRRLGRVYRHSGTRVRSAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...TGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GAGGGCGGCAGCGCGCACCAGGCGCGGGGACTTGCGGCCGAGCCAGATGAACACCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: EGGSAHQARGLAAEPDEHQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...GTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GCTGCGGCTGACCGTGGCATGGCGTGGCCGGTGCAGCATCCCGCACAGCTCCTGGCAGCGATGGCAGGCTaGACAGCTCCCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: AAADRGMAWPVQHPAQLLAAMAG*TAPHEA
Trigger: CGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGC...CAGGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGCCACGGTCAGCCGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 72 bp AGCTTGAGGGCGGCAGCGCGCACCAGGCGCGGGGACTaGCGGCCGAGCCAGATGAACACGTCGGACCAACAG +
Preference number: 4 (lower is better)
Translates to: SLRAAARTRRGD*RPSQMNTSDQQ
Trigger: CTGTTGGTCCGACGTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTCAAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GAGGGCGGCAGCGCGCACCAGGCGCGGGGACTTGCGGCCGAGCCAGATGAACACCTGAGGGCAGTGAGGTaGGCTGATTTCGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: EGGSAHQARGLAAEPDEHLRAVR*ADFGTG
Trigger: ACCTGTCCCGAAATCAGCTCACCTCACTGCCCTCAG...GTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GCTGGTGGGCAGGTTGCTCTGGGTGCGCTGGGTGCTCCGCAGGTGCAGGGTCTGCTGGTCATCCTGGGCTaGATCCTTGCGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: AGGQVALGALGAPQVQGLLVILG*ILAPPQ
Trigger: CTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAG...CAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCACCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GCTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTGAGCTGCCGGAGCTGTaGATGCAGCAGGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AAHCPCGPGAAGAAAHVPELPEL*MQQGVS
Trigger: GGAAACCCCCTGCTGCATGCACAGCTCCGGCAGCTC...AGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCGCTGCCGTTGGTGCGGATCTGGTAGAGGCTGGGCTGTTGGGCGCCCTGGACCCCTGCAGCTGCAGCTaGAGCCACGGTAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GAAVGADLVEAGLLGALDPCSCS*SHGSRR
Trigger: TCTCCTGCTACCGTGGCTGCAGCTGCAGCTGCAGGG...GTCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCAGGGCTCCCCACCCAGTaGCTCCCAGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RRRRLGRVYRHSGTRVRSGLPTQ*LPELWE
Trigger: CTCCCAGAGTTCTGGGAGGCACTGGGTGGGGAGCCC...TGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCGCTGCCGTTGGTGCGGATCTGGTAGAGGCTGGGCTGTTGGGCGCCCTGGACTTGGCCTTGAACACCTaGGCCTCGGTGCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: GAAVGADLVEAGLLGALDLALNT*ASVPSR
Trigger: CCTCGAGGGCACCGAGGCGCAGGTGTTCAAGGCCAA...GTCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTCTGGATGCACCGGGTaGAGAGGGCGCTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: GGAGWGGCTDTRAPVSGHSGCTG*RGRCRW
Trigger: CCAACGGCAGCGCCCTCTGCACCCGGTGCATCCAGA...ATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GCTGGTGGGCAGGTTGCTCTGGGTGCGCTGGGTGCTCCGCAGGTGCAGGGTCTGTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AGGQVALGALGAPQVQGLSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...CAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCACCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CCA 90 bp GGCGTGCTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGAGCACCTGCTTGGCCTaGTCATCCTGGGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: GVLLIALADQAQPARPLMSTCLA*SSWAES
Trigger: GGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCT...CATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 72 bp GCGGCACGGTCTGCGGGCTTGGGCGGCATGACCAGGTaGGGGTTCTCCCGCACATCCAGGACCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: AARSAGLGGMTR*GFSRTSRTSIS
Trigger: GGAGATCGAGGTCCTGGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GCTGCGGCTGACCGTGGCATGGCGTGGCCGGTGCAGCATCCCGCACAGCTCCTGCCTGCACCAGCAGTGTaGTCTCAGCCTTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: AAADRGMAWPVQHPAQLLPAPAV*SQPSLS
Trigger: GGAAAGGGAAGGCTGAGATCACACTGCTGGTGCAGG...CAGGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGCCACGGTCAGCCGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLIALADQAQPARPLMFLPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...AAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GAGGGCGGCAGCGCGCACCAGGCGCGGGGACTTGCGGCCGAGCCAGATGAACACGGGCAACATCTGACATaGCCTTCAGCACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: EGGSAHQARGLAAEPDEHGQHLT*PSAPAW
Trigger: CCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCC...GTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACAGGCGTGCTGCTCATTaGCCTTGCGGACCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: SLPLRTRRSRRGRSCSLDRRAAH*PCGPGA
Trigger: TGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCT...GTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp CTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGAACTCTGGGAGCTCCTaGCCCTGCACCAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LADQAQPARPLMFLGPHVNSGSS*PCTSSV
Trigger: CACACTGCTGGTGCAGGGCCAGGAGCTCCCAGAGTT...CACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTTGCCTCCCAGAACTCTaGGAGCTCCTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LLIALADQAQPARPLMFLCLPEL*ELLALH
Trigger: GTGCAGGGCCAGGAGCTCCCAGAGTTCTGGGAGGCA...AAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCCACCTTGTACAGCTTaGGCTGCGGCGGCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LADQAQPARPLMFLGPHVPPCTA*AAAARS
Trigger: ACTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGG...CACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GCTGCGGCTGACCGTGGCATGGCGTGGCCGGTGCAGCATCCCGCACAGCTCCTGAGCTTGATCTCCACCTaGCTAGTCTGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: AAADRGMAWPVQHPAQLLSLIST*LVWVPT
Trigger: GGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCT...CAGGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGCCACGGTCAGCCGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: SLPLRTRRSRRGRSCSLDGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...GTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR CAA 72 bp CGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTaGGACCGCATGTGCTGGATATATACCTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RTRRSRRGRSCS*DRMCWIYTWQA
Trigger: GGCCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
3UTR CAA 72 bp AGCTGCCGGAGCTGTGCATGCAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGGTGCACCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SCRSCACSRGFP*STSVCRCTRRR
Trigger: GCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACAGCTCCGGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GCTGGTGGGCAGGTTGCTCTGGGTGCGCTGGGTGCTCCGCAGGTGCAGGGTCTGCTGAGGGCAGTGAGGTaGGCTGATTTCGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: AGGQVALGALGAPQVQGLLRAVR*ADFGTG
Trigger: ACCTGTCCCGAAATCAGCTCACCTCACTGCCCTCAG...CAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCACCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR TCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCGGGCTTGGGCGGCATaGCCAGGTTGGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRRAWAA*PGWGSP
Trigger: GGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCG...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCTCCTGACCCAGCTTaGGGGCGGCAGCGCGCACCA +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVAPDPA*GRQRAP
Trigger: TGGTGCGCGCTGCCGCCCTCAAGCTGGGTCAGGAGC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGATCCCGCACAGCTCCTaGCCCAGCTTGAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: AGWGGCTDTRAPVSGHCRIPHSS*PSLRAA
Trigger: TGCCGCCCTCAAGCTGGGTCAGGAGCTGTGCGGGAT...CCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCCCTCGAGGCTGCGGCTaGCCGTGGCATGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTPRGCG*PWHGVA
Trigger: GGCCACGCCATGCCACGGTCAGCCGCAGCCTCGAGG...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATCCTCGAGGCTGCGGCTaGCCGTGGCATGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHPRGCG*PWHGVA
Trigger: GGCCACGCCATGCCACGGTCAGCCGCAGCCTCGAGG...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCCTCGAGGCTGCGGCTaGCCGTGGCATGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAPRGCG*PWHGVA
Trigger: GGCCACGCCATGCCACGGTCAGCCGCAGCCTCGAGG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: GGAGWGGCTDTRAPVSGHPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...ATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: AGWGGCTDTRAPVSGHCRAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...CCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp CGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGGCTTGGGCGGCATCTCAGCGGCACGGTCTaGGGGCTTGGGCGGCATGAC +
Preference number: 4 (lower is better)
Translates to: REVDVVPLSGTVCGLGRHLSGTV*GLGRHD
Trigger: GTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAG...ATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGGCATGGCGTGGCCGGTaGAGCATCCCGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRAWRGR*SIPHSS
Trigger: GGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGC...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGAGGCGTGCTGCTCATTaGCCTTGCGGACCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLRRAAH*PCGPGA
Trigger: TGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCT...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTACGGCAGCACCCCGGTaGCCTCCATGGCGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCTAAPR*PPWRRS
Trigger: AGAGCGGCGCCATGGAGGCCACCGGGGTGCTGCCGT...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGCAGGGCCGTCATCGCTaGGAGCTGCCGGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGQGRHR*ELPELC
Trigger: GCACAGCTCCGGCAGCTCCCAGCGATGACGGCCCTG...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CCA 90 bp GGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATAACTCTGGGAGCTCCTaGCCCTGCACCAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GGAGWGGCTDTRAPVSGHNSGSS*PCTSSV
Trigger: CACACTGCTGGTGCAGGGCCAGGAGCTCCCAGAGTT...ATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp AGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATGACCGTGGCATGGCGTaGCCGGTGCAGCATCCCGCA +
Preference number: 4 (lower is better)
Translates to: RRSRRGRSCSLDRMCWIYDRGMA*PVQHPA
Trigger: TGCGGGATGCTGCACCGGCCACGCCATGCCACGGTC...ATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: GAGWGGCTDTRAPVSGHCGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...GCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: DQAQPARPLMFLGPHVLDLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...ATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp TCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SLPLRTRRSRRGRSCSLDLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...GTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR TCA 90 bp TCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCCAGGCGGTTCTCGCTaGGGTCCAGGTATAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SLPLRTRRSRRGRSCSLDPGGSR*GPGIVG
Trigger: ACCTACTATACCTGGACCTCAGCGAGAACCGCCTGG...GTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCCGGGCTTGGGCGGCATaGCCAGGTTGGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPRAWAA*PGWGSP
Trigger: GGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCG...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCGCTCCTGACCCAGCTTaGGGGCGGCAGCGCGCACCA +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTAPDPA*GRQRAP
Trigger: TGGTGCGCGCTGCCGCCCTCAAGCTGGGTCAGGAGC...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCCTCGAGGCTGCGGCTaGCCGTGGCATGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRPRGCG*PWHGVA
Trigger: GGCCACGCCATGCCACGGTCAGCCGCAGCCTCGAGG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGGGCTTCGTCAGGGTCTaGTGCCCGGCCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLGFVRV*CPAHPG
Trigger: GCCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCC...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR TCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCGGCTTCGTCAGGGTCTaGTGCCCGGCCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPGFVRV*CPAHPG
Trigger: GCCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCC...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR GCA 90 bp CAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGAACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: QAGEGVQTLGHPCQVIAGTSVCR*TRRRIC
Trigger: GCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGT...TCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCRRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: QTLGHPCQVIAGQIHVCEWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...CTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCAGGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: YAQGQLRDLVAAEVEAAQGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...CTGCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTCTCAGCGGCACGGTCTaGGGGCTTGGGCGGCATGAC +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAALSGTV*GLGRHD
Trigger: GTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAG...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GAGGGCGGCAGCGCGCACCAGGCGCGGGGACTTGCGGCCGAGCCAGATGAACACTCTGCGCTCTCCTCCTaGTTTTTGTTCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EGGSAHQARGLAAEPDEHSALSS*FLFFSW
Trigger: CCAGGAGAAGAACAAAAAGCAGGAGGAGAGCGCAGA...GTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGGGGGCCCGGGCATCTaGGCTCTCCTCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQGGPGI*ALLLLF
Trigger: AAAAAGCAGGAGGAGAGCGCAGATGCCCGGGCCCCC...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CGGGGACTCCGGAATTCTTCAGACTGTTGGCTCGGGCCACGATGGCGCGCAGCGCCTGCTGCTGCGTCATaGGTACCACCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RGLRNSSDCWLGPRWRAAPAAAS*VPPPAS
Trigger: GGAAGCTGGAGGTGGTACGCATGACGCAGCAGCAGG...CGCTGCGCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTCCGGAGTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GTGCCAGCCTGTCTTAGGCCAGGGCCTTGCAGAAGGCGCTCCAGGCGTGGAAGCGGGTTCTCCTGCTGCTaGGTCATGCGTACCACCTCC +
Preference number: 4 (lower is better)
Translates to: VPACLRPGPCRRRSRRGSGFSCC*VMRTTS
Trigger: GGAGGTGGTACGCATGACGCAGCAGCAGGAGAACCC...GCTTCCACGCCTGGAGCGCCTTCTGCAAGGCCCTGGCCTAAGACAGGCTGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGGGGTTCTCCTGCTaGTGCGTCATGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: RRRRLGRVYRHSGTRVRSLGFSC*CVMRTT
Trigger: GGTGGTACGCATGACGCAGCAGCAGGAGAACCCCAA...TGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 4 (lower is better)
Translates to: LLIALADQAQPARPLMFLGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...AAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GGCCAGGGCCTTGCAGAAGGCGCTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTGGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 4 (lower is better)
Translates to: GQGLAEGAPGVEAAGKGVGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...CACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGCCTTCTGCAAGGCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTACGGCAGCACCCCGGTaGCCTCCATGGCGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGATAAPR*PPWRRS
Trigger: AGAGCGGCGCCATGGAGGCCACCGGGGTGCTGCCGT...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGACGGCAGCACCCCGGTaGCCTCCATGGCGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLTAAPR*PPWRRS
Trigger: AGAGCGGCGCCATGGAGGCCACCGGGGTGCTGCCGT...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCAGGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: YAQGQLRDLVAAEVEAAQVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...CTGCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGGTCAGTCCGGGCAGCTaGCCCACGTCCTCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRVSPGS*PTSSVK
Trigger: CTTCACGGAGGACGTGGGCCAGCTGCCCGGACTGAC...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGACCGTGGCATGGCGTaGCCGGTGCAGCATCCCGCA +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLDRGMA*PVQHPA
Trigger: TGCGGGATGCTGCACCGGCCACGCCATGCCACGGTC...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCGGCTGACCGTGGCATaGCGTGGCCGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVRLTVA*RGRCSI
Trigger: GATGCTGCACCGGCCACGCCATGCCACGGTCAGCCG...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCCCTCGGCCAGCGACATaGGCGGCTGCCGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASPRPAT*AAAAAG
Trigger: TCCTGCCGCGGCAGCCGCCCATGTCGCTGGCCGAGG...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATAGCTTGATCTCCACCTaGCTAGTCTGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: DQAQPARPLMFLGPHVLDSLIST*LVWVPT
Trigger: GGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCT...ATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGGGGGACAGCGAGCCTTaGGTGATGACCCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGGDSEP*VMTLPC
Trigger: GCAGGGCAGGGTCATCACCCAAGGCTCGCTGTCCCC...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
64% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
3UTR CAA 72 bp TCGATGTTGTACCACTCAGCGGCACGGTCTGCGGGCTaGGGCGGCATGACCAGGTTGGGGTTCTCCCGCACA +
Preference number: 4 (lower is better)
Translates to: SMLYHSAARSAG*GGMTRLGFSRT
Trigger: TGTGCGGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTACAACATCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 72 bp GCTAGCCGCAGCTGGTTCTGCAGCGAGAAGTCGATGTaGTACCACTCAGCGGCACGGTCTGCGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ASRSWFCSEKSM*YHSAARSAGLG
Trigger: GCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGCTGCGGCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 72 bp TCCTGGGCTGAATCCTTGCGCCTCCGCAGTCGCATCTaGCGAGCCATAGGGTCCTTGGGCCCACTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SWAESLRLRSRI*RAIGSLGPLPA
Trigger: TGCAGGGAGTGGGCCCAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: GGAGWGGCTDTRAPVSGHGSEVS*FRDRFR
Trigger: TCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCC...ATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR TCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCCGGGCTTGGGCGGCATaGCCAGGTTGGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTRAWAA*PGWGSP
Trigger: GGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCG...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGGGTAGTTGCGCAAGTTaGCAGCGTGGATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLGSCAS*QRGWQS
Trigger: GCTCTGCCATCCACGCTGTCAACTTGCGCAACTACC...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGCCAGAGAGGTCCCCTTaGGGGGCACAGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGPERSP*GAQAPT
Trigger: AGTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGG...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCGCTCCTGACCCAGCTTaGGGGCGGCAGCGCGCACCA +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPAPDPA*GRQRAP
Trigger: TGGTGCGCGCTGCCGCCCTCAAGCTGGGTCAGGAGC...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCGCTCCTGACCCAGCTTaGGGGCGGCAGCGCGCACCA +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASAPDPA*GRQRAP
Trigger: TGGTGCGCGCTGCCGCCCTCAAGCTGGGTCAGGAGC...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTCCTCGAGGCTGCGGCTaGCCGTGGCATGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFPRGCG*PWHGVA
Trigger: GGCCACGCCATGCCACGGTCAGCCGCAGCCTCGAGG...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGGCTTCGTCAGGGTCTaGTGCCCGGCCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGGFVRV*CPAHPG
Trigger: GCCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCC...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR TCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCGGCTTCGTCAGGGTCTaGTGCCCGGCCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVGFVRV*CPAHPG
Trigger: GCCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCC...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAATSVCR*TRRRIC
Trigger: GCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGT...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGARRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTRRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: SMHRDSSVIWLLLRLRRRAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...GCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGCTCAGCGGCACGGTCTaGGGGCTTGGGCGGCATGAC +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLLSGTV*GLGRHD
Trigger: GTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAG...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGCTCAGCGGCACGGTCTaGGGGCTTGGGCGGCATGAC +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALLSGTV*GLGRHD
Trigger: GTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAG...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCCTCAGCGGCACGGTCTaGGGGCTTGGGCGGCATGAC +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCLSGTV*GLGRHD
Trigger: GTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAG...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGGGGGGCCCGGGCATCTaGGCTCTCCTCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRGGPGI*ALLLLF
Trigger: AAAAAGCAGGAGGAGAGCGCAGATGCCCGGGCCCCC...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCACAGCCTCGTAGAACTTaGCGTGGAAGGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RRRRLGRVYRHSGTRVRSQPRRT*RGRLPP
Trigger: TGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTG...TGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCGCATGGCGTGGCCGGTaGAGCATCCCGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTAWRGR*SIPHSS
Trigger: GGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGC...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGCACTCCTCCATCAGCTaGTCCGCCTCGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLHSSIS*SASASD
Trigger: GTCGCTGGCCGAGGCGGAGCAGCTGATGGAGGAGTG...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCTGGCTGCTTCTCCTCTaGCTCAGCGGTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GAGWGGCTDTRAPVSGHCWLLLL*LSGCFL
Trigger: GAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCA...GCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTAACTTGGGGTTCTCCTaGTGCTGCGTCATGCGTACC +
Preference number: 4 (lower is better)
Translates to: LLIALADQAQPARPLMFLNLGFS*CCVMRT
Trigger: GGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTT...AAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCGGGCGCTGCCGTTGGTaGGGATCTGGTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPGRCRW*GSGRGW
Trigger: CCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCC...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GCTGGTTCTGCAGCGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGTCTGGATGCACCGGGTaGAGAGGGCGCTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: AGSAARSRCCTTQRHGLRSGCTG*RGRCRW
Trigger: CCAACGGCAGCGCCCTCTGCACCCGGTGCATCCAGA...CCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGGGCCCACTCCCAGCTaGAGCTGCAGCCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALGPTPS*SCSHGS
Trigger: GCTACCGTGGCTGCAGCTGCAGCTGGGAGTGGGCCC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000545457.6
ENST00000578558.5
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCACGGCAGCACCCCGGTaGCCTCCATGGCGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVITAAPR*PPWRRS
Trigger: AGAGCGGCGCCATGGAGGCCACCGGGGTGCTGCCGT...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGGCAGCGATGGCAGGCTaGACAGCTCCCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRAAMAG*TAPHEA
Trigger: CGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGC...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCGGCCAGAAGTCTTCAGGCACGTGCTTCTTGATCTCAGAGGGCTCCCCACCCGCAGCGATGGCAGGCTaGACAGCTCCCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: GGQKSSGTCFLISEGSPPAAMAG*TAPHEA
Trigger: CGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGC...GGGTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTTCTGGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGATGGCGCGCAGCGATaGCAGGCTGGACAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTDGAQR*QAGQLP
Trigger: GGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCATC...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCGATGGCGCGCAGCGATaGCAGGCTGGACAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTDGAQR*QAGQLP
Trigger: GGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCATC...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATCAGGGCCGTCATCGCTaGGAGCTGCCGGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHQGRHR*ELPELC
Trigger: GCACAGCTCCGGCAGCTCCCAGCGATGACGGCCCTG...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCCAGGGCCGTCATCGCTaGGAGCTGCCGGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPQGRHR*ELPELC
Trigger: GCACAGCTCCGGCAGCTCCCAGCGATGACGGCCCTG...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR CCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCAGGGCCGTCATCGCTaGGAGCTGCCGGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAQGRHR*ELPELC
Trigger: GCACAGCTCCGGCAGCTCCCAGCGATGACGGCCCTG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GGAGWGGCTDTRAPVSGHDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...ATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CCA 90 bp CTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTCCGTCAGGAAATGGATaGCTTCTGGGAGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: LLIALADQAQPARPLMFLPSGNG*LLGGSP
Trigger: TGGTGACCCTCCCAGAAGCCATCCATTTCCTGACGG...AAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCTTCTCCAGGCCCTaGTCCCAACGCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCGFSRP*SQRRTF
Trigger: GAAGGTGCGGCGTTGGGACCAGGGCCTGGAGAAGCC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGTCAGTCCGGGCAGCTaGCCCACGTCCTCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: PARPLMFLGPHVLDIYLAVSPGS*PTSSVK
Trigger: CTTCACGGAGGACGTGGGCCAGCTGCCCGGACTGAC...TGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGACCGTGGCATGGCGTaGCCGGTGCAGCATCCCGCA +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHDRGMA*PVQHPA
Trigger: TGCGGGATGCTGCACCGGCCACGCCATGCCACGGTC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GCAGAACTCGGAGTTGAGGAGGCTGGAGTCGGTGTTGATCTGGATGCACCGGGTGACCGTGGCATGGCGTaGCCGGTGCAGCATCCCGCA +
Preference number: 4 (lower is better)
Translates to: AELGVEEAGVGVDLDAPGDRGMA*PVQHPA
Trigger: TGCGGGATGCTGCACCGGCCACGCCATGCCACGGTC...ACCCGGTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCAGGGCTCCTCCAGCCCATaGGAGCCTTTGGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: YAQGQLRDLVAAEVEAAQGSSSP*EPLGSH
Trigger: GTGGCTCCCCAAAGGCTCCCATGGGCTGGAGGAGCC...CTGCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGCAGGGCCGTCATCGCTaGGAGCTGCCTGTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGQGRHR*ELPVVA
Trigger: AGCCACAACAGGCAGCTCCCAGCGATGACGGCCCTG...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545457.6
ENST00000638404.1
CDS-3UTR TCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCCGGGCTTGGGCGGCATaGCCAGGTTGGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGRAWAA*PGWGSP
Trigger: GGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCG...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCGGGCTTGGGCGGCATaGCCAGGTTGGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIRAWAA*PGWGSP
Trigger: GGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCG...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGCCAGAGAGGTCCCCTTaGGGGGCACAGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: GHPCQVIAGQIHVCEVAQPERSP*GAQAPT
Trigger: AGTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGG...CTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGCTCCTGACCCAGCTTaGGGGCGGCAGCGCGCACCA +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRAPDPA*GRQRAP
Trigger: TGGTGCGCGCTGCCGCCCTCAAGCTGGGTCAGGAGC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp CGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGCATCCCGCACAGCTCCTaGCCCAGCTTGAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: RDRFRVSTCTHWSMHRDSIPHSS*PSLRAA
Trigger: TGCCGCCCTCAAGCTGGGTCAGGAGCTGTGCGGGAT...GCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCTGGAGTCGGTGTTaGTCTGGATGCACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCGWSRC*SGCTGC
Trigger: GCACCCGGTGCATCCAGATCAACACCGACTCCAGCC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GCTGGTTCTGCAGCGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGGGCTGGAGTCGGTGTTaGTCTGGATGCACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: AGSAARSRCCTTQRHGLRGWSRC*SGCTGC
Trigger: GCACCCGGTGCATCCAGATCAACACCGACTCCAGCC...CCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGGGCTTCGTCAGGGTCTaGTGCCCGGCCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQGFVRV*CPAHPG
Trigger: GCCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCC...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR TCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACGGCTTCGTCAGGGTCTaGTGCCCGGCCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHGFVRV*CPAHPG
Trigger: GCCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCC...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR TCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGCGGCCAGAAGTCTTCAGGCACGTGCTTCTTGATCTCAGAGGGCTCCCCACCCCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: GGQKSSGTCFLISEGSPPPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...GGGTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTTCTGGCCGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: GCTDTRAPVSGHCRTDPRTSVCR*TRRRIC
Trigger: GCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGT...ACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTTGAGCACGAGCGTCTaGAGGTGCACCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHLSTSV*RCTRRR
Trigger: GCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAA...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GCTGGTTCTGCAGCGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGGAGCTGCCGGAGCTGTaGATGCAGCAGGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AGSAARSRCCTTQRHGLRELPEL*MQQGVS
Trigger: GGAAACCCCCTGCTGCATGCACAGCTCCGGCAGCTC...CCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIRRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGRRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVRRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGGGCACCTGCAGAGACTTTCAGGGACCAGCTCCAGGTTGTTGTTGGCAGCCATCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: WAPAETFRDQLQVVVGSHRRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...ATGGCTGCCAACAACAACCTGGAGCTGGTCCCTGAAAGTCTCTGCAGGTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAAGTCCTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: NSSRLVSLPMPEGSPSKSWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...GGACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGTAGCAGTCAGCCTCGTAGAACTTGCCGTGGAAGGCTTCCTCCACCAGCACAGTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: CSSQPRRTCRGRLPPPAQWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...CTGTGCTGGTGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTGACTGCTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: AMNSSRLVSLPMPEGSPSAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...TGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAAGTCCGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: NSSRLVSLPMPEGSPSKSGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...GGACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: HPLVYAQGQLRDLVAAEVGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...AACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp GCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: AGWGGCTDTRAPVSGHCRGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...CCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCTCAGCGGCACGGTCTaGGGGCTTGGGCGGCATGAC +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVILSGTV*GLGRHD
Trigger: GTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAG...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTCTCAGCGGCACGGTCTaGGGGCTTGGGCGGCATGAC +
Preference number: 4 (lower is better)
Translates to: HPLVYAQGQLRDLVAAEVLSGTV*GLGRHD
Trigger: GTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAG...AACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGTCTCCTCCCGGACAGTaGGGCACTCAGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: QTLGHPCQVIAGQIHVCESPPGQ*GTQHPG
Trigger: ACCTGGGTGCTGAGTGCCGCACTGTCCGGGAGGAGA...CTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGCATGGCGTGGCCGGTaGAGCATCCCGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERAWRGR*SIPHSS
Trigger: GGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGAGAGACCCGGGCTCTaGAGCACGGCCTCCGCATTG +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHERPGL*STASAL
Trigger: CAATGCGGAGGCCGTGCTGCAGAGCCCGGGTCTCTC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGCGACATGGGCGGCTaGCGCGGCAGGAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLSDMGG*RGRKSA
Trigger: TGCGCTTTTCCTGCCGCGGCAGCCGCCCATGTCGCT...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGCACTCCTCCATCAGCTaGTCCGCCTCGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLHSSIS*SASASD
Trigger: GTCGCTGGCCGAGGCGGAGCAGCTGATGGAGGAGTG...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGCCGCGCAAACTTCTTaGCCTCCAGCACGAAACCCT +
Preference number: 4 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQAAQTS*PPARNP
Trigger: AGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGC...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGCTTCCTCGCCTTCTTTaGCCTCGGCCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AGWGGCTDTRAPVSGHCRLPRLL*PRPSPP
Trigger: AGGAGGAGAAGGCCGAGGGCAAAGAAGGCGAGGAAG...CCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGGGGTTCTCCTGCTGCTaGGTCATGCGTACCACCTCC +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGGFSCC*VMRTTS
Trigger: GGAGGTGGTACGCATGACGCAGCAGCAGGAGAACCC...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGGGCGCTGCCGTTGGTaGGGATCTGGTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALGRCRW*GSGRGW
Trigger: CCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGGCGCTGCCGTTGGTaGGGATCTGGTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTGRCRW*GSGRGW
Trigger: CCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCC...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGGGGCGCTGCCGTTGGTaGGGATCTGGTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLGRCRW*GSGRGW
Trigger: CCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCC...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTCTGGATGCACCGGGTaGAGAGGGCGCTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPSGCTG*RGRCRW
Trigger: CCAACGGCAGCGCCCTCTGCACCCGGTGCATCCAGA...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRAAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGAGGCGTGCTGCTCATTaGCCTTGCGGACCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: QTLGHPCQVIAGQIHVCERRAAH*PCGPGA
Trigger: TGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCT...CTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GCTGGTTCTGCAGCGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGSAARSRCCTTQRHGLRPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...CCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GHPCQVIAGQIHVCEVAQPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...CTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGACGGCAGCACCCCGGTaGCCTCCATGGCGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPETAAPR*PPWRRS
Trigger: AGAGCGGCGCCATGGAGGCCACCGGGGTGCTGCCGT...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCAGCGATGGCAGGCTaGACAGCTCCCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVAAMAG*TAPHEA
Trigger: CGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGATGGCGCGCAGCGATaGCAGGCTGGACAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRDGAQR*QAGQLP
Trigger: GGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCATC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCGATGGCGCGCAGCGATaGCAGGCTGGACAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGDGAQR*QAGQLP
Trigger: GGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCATC...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTCAGGGCCGTCATCGCTaGGAGCTGCCGGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: HPLVYAQGQLRDLVAAEVQGRHR*ELPELC
Trigger: GCACAGCTCCGGCAGCTCCCAGCGATGACGGCCCTG...AACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCCAGGGCCGTCATCGCTaGGAGCTGCCGGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVQGRHR*ELPELC
Trigger: GCACAGCTCCGGCAGCTCCCAGCGATGACGGCCCTG...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TCCACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: STCTHWSMHRDSSVIWLLLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...CAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AMNSSRLVSLPMPEGSPSDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...TGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GCTDTRAPVSGHCRTDPRDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...ACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CCA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGTTGGCCTGGTCATCCTaGGCTGAATCCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQLAWSS*AESLRL
Trigger: GAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAA...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCGGCTTCTCCAGGCCCTaGTCCCAACGCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPGFSRP*SQRRTF
Trigger: GAAGGTGCGGCGTTGGGACCAGGGCCTGGAGAAGCC...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCGTCAGTCCGGGCAGCTaGCCCACGTCCTCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCVSPGS*PTSSVK
Trigger: CTTCACGGAGGACGTGGGCCAGCTGCCCGGACTGAC...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGGGGACTCCGGAATTCTTCAGACTGTTGGCTCGGGCCACGATGGCGCGCAGCGTCTCTGCAAAGAGCCTaGCCTTGGTGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RGLRNSSDCWLGPRWRAASLQRA*PWWCCS
Trigger: TGAGCAGCACCACCAAGGCCAGGCTCTTTGCAGAGA...CGCTGCGCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTCCGGAGTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGTGCCTCCCAGAACTCTaGGAGCTCCTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLCLPEL*ELLALH
Trigger: GTGCAGGGCCAGGAGCTCCCAGAGTTCTGGGAGGCA...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGACCGTGGCATGGCGTaGCCGGTGCAGCATCCCGCA +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGDRGMA*PVQHPA
Trigger: TGCGGGATGCTGCACCGGCCACGCCATGCCACGGTC...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGACCGTGGCATGGCGTaGCCGGTGCAGCATCCCGCA +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPDRGMA*PVQHPA
Trigger: TGCGGGATGCTGCACCGGCCACGCCATGCCACGGTC...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCCGGCTGACCGTGGCATaGCGTGGCCGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASRLTVA*RGRCSI
Trigger: GATGCTGCACCGGCCACGCCATGCCACGGTCAGCCG...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGACGGCTGACCGTGGCATaGCGTGGCCGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERRLTVA*RGRCSI
Trigger: GATGCTGCACCGGCCACGCCATGCCACGGTCAGCCG...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp ATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAAGTCCTCCTCCGGCTGACCGTGGCATaGCGTGGCCGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: IGGFTALPEVHDALEVLLRLTVA*RGRCSI
Trigger: GATGCTGCACCGGCCACGCCATGCCACGGTCAGCCG...GAGGAGGACTTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCCGGCTGACCGTGGCATaGCGTGGCCGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVRLTVA*RGRCSI
Trigger: GATGCTGCACCGGCCACGCCATGCCACGGTCAGCCG...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGCCTCGGCCAGCGACATaGGCGGCTGCCGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VTRWFLFRTSFLSFGHLQPRPAT*AAAAAG
Trigger: TCCTGCCGCGGCAGCCGCCCATGTCGCTGGCCGAGG...CTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCGGATCTGGTAGAGGCTaGGCTGTTGGGCGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPGSGRG*AVGRPG
Trigger: TCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCC...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCAGAGGGCGCTGCCGTTaGTGCGGATCTGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPRGRCR*CGSGRG
Trigger: GCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCT...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACTTGGACCGCATGTGCTaGATATATACCTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLPLRTRRSRRGRSCSLDLDRMC*IYTWQA
Trigger: GGCCTGCCAGGTATATATCCAGCACATGCGGTCCAA...GTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATAT +
Preference number: 4 (lower is better)
Translates to: GGAGWGGCTDTRAPVSGHAAHVP*TACAGY
Trigger: ATATCCAGCACATGCGGTCCAAGGAACATGAGCGGC...ATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGGCTTGGGCGGCATCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: REVDVVPLSGTVCGLGRHLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...ATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGCCCATGGGAGCCTTTaGGGAGCCACAGAACCAACT +
Preference number: 4 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQAHGSL*GATEPT
Trigger: AGTTGGTTCTGTGGCTCCCCAAAGGCTCCCATGGGC...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp ACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGCAGGGCCGTCATCGCTaGGAGCGGAGCTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: TCTHWSMHRDSSVIWLLLQGRHR*ERSCAC
Trigger: GCATGCACAGCTCCGCTCCCAGCGATGACGGCCCTG...CAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581401.1
ENST00000639299.1
3UTR CAA 72 bp AGCACCTGCTTGGCCTGGTCATCCTGGGCTGAATCCTaGCGCCTCCGCAGTCGCATCTTGCGAGCCATAGGG +
Preference number: 4 (lower is better)
Translates to: STCLAWSSWAES*RLRSRILRAIG
Trigger: CCCTATGGCTCGCAAGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGCTGGACAGCTCCCCATaGAGCGTGGTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGLDSSP*SVVRLL
Trigger: CAACAACCTGACCACGCTTCATGGGGAGCTGTCCAG...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTGGACAGCTCCCCATaGAGCGTGGTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRLDSSP*SVVRLL
Trigger: CAACAACCTGACCACGCTTCATGGGGAGCTGTCCAG...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCAGGFH*ARASAG
Trigger: ACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPAGGFH*ARASAG
Trigger: ACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGC...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQGSEVS*FRDRFR
Trigger: TCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCC...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR TCA 90 bp TATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCAGGAGCTTGCCAATGCCTaGGGGCAGCCCGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: YAQGQLRDLVAAEVEAAQELANA*GQPVKV
Trigger: GACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTC...CTGCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGAGCTTGCCAATGCCTaGGGGCAGCCCGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVELANA*GQPVKV
Trigger: GACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGCTGGTCATCCTGGGCTaGATCCTTGCGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALLVILG*ILAPPQ
Trigger: CTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAG...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTCTGGTCATCCTGGGCTaGATCCTTGCGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTLVILG*ILAPPQ
Trigger: CTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAG...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGCCAGAGAGGTCCCCTTaGGGGGCACAGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLPERSP*GAQAPT
Trigger: AGTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGG...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCAGGCACGTGCTTCTTaGTCTCAGAGGGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVQARAS*SQRAPH
Trigger: GTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTG...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTGCTCCTGACCCAGCTTaGGGGCGGCAGCGCGCACCA +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFAPDPA*GRQRAP
Trigger: TGGTGCGCGCTGCCGCCCTCAAGCTGGGTCAGGAGC...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCATCCCGCACAGCTCCTaGCCCAGCTTGAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASIPHSS*PSLRAA
Trigger: TGCCGCCCTCAAGCTGGGTCAGGAGCTGTGCGGGAT...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: GAAAHVPWTACAGYIPGRPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...CCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR TCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGATTTCCCAGACCCCTaGGGGCACCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVDFPDP*GHLSGS
Trigger: TGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGATTTCCCAGACCCCTaGGGGCACCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCDFPDP*GHLSGS
Trigger: TGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGGATTTCCCAGACCCCTaGGGGCACCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GHPCQVIAGQIHVCEVAQDFPDP*GHLSGS
Trigger: TGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATC...CTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCGGTAGCAGAGGCCAGTaGGGTTCAGCTTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPGSRGQ*GSASAT
Trigger: GGTGGCTGAAGCTGAACCGCACTGGCCTCTGCTACC...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGTAGCAGTCAGCCTCGTAGAACTTGCCGTGGAAGGCTTCCTCCACCAGCACAGACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: CSSQPRRTCRGRLPPPAQTSVCR*TRRRIC
Trigger: GCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGT...CTGTGCTGGTGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTGACTGCTACA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVTSVCR*TRRRIC
Trigger: GCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGT...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGTSVCR*TRRRIC
Trigger: GCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGT...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCTTGAGCACGAGCGTCTaGAGGTGCACCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCLSTSV*RCTRRR
Trigger: GCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAA...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR GCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCTTGAGCACGAGCGTCTaGAGGTGCACCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVILSTSV*RCTRRR
Trigger: GCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAA...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCGAGCTGCCGGAGCTGTaGATGCAGCAGGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTELPEL*MQQGVS
Trigger: GGAAACCCCCTGCTGCATGCACAGCTCCGGCAGCTC...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: FRDRFRVSTCTHWSMHRDRRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...GTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWRRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTGCCAGCCTGTCTTAGGCCAGGGCCTTGCAGAAGGCGCTCCAGGCGTGGAAGCTCAGCTTTGGGCACCTaGAGAGACTTTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: VPACLRPGPCRRRSRRGSSALGT*RDFQGP
Trigger: TGGTCCCTGAAAGTCTCTGCAGGTGCCCAAAGCTGA...GCTTCCACGCCTGGAGCGCCTTCTGCAAGGCCCTGGCCTAAGACAGGCTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGCTCAGCGGCACGGTCTaGGGGCTTGGGCGGCATGAC +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPELSGTV*GLGRHD
Trigger: GTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAG...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAAGTCCCCCACTCCCTGCAGCTaGAGCTGCAGCCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: NSSRLVSLPMPEGSPSKSPTPCS*SCSHGS
Trigger: GCTACCGTGGCTGCAGCTGCAGCTGCAGGGAGTGGG...GGACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCTTGGGCCCACTCCCTaGAGCTGCAGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVILGPTP*SCSCSH
Trigger: GTGGCTGCAGCTGCAGCTGCAGGGAGTGGGCCCAAG...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000638207.2
ENST00000639036.1
CDS-3UTR GCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCCCTGGGCTGAATCCTTaGGCCTCCGCAGTCGCATCT +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPPGLNP*ASAVAS
Trigger: AGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGG...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGGGGGCCCGGGCATCTaGGCTCTCCTCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALGGPGI*ALLLLF
Trigger: AAAAAGCAGGAGGAGAGCGCAGATGCCCGGGCCCCC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTTCTCCTCCCGGACAGTaGGGCACTCAGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGASPPGQ*GTQHPG
Trigger: ACCTGGGTGCTGAGTGCCGCACTGTCCGGGAGGAGA...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGGGGCTCCCCACCCAGTaGCTCCCAGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGQVQSFHVHPLVYAQGQGLPTQ*LPELWE
Trigger: CTCCCAGAGTTCTGGGAGGCACTGGGTGGGGAGCCC...CTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTTTGGCCTTGAACACCTaGGCCTCGGTGCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTLALNT*ASVPSR
Trigger: CCTCGAGGGCACCGAGGCGCAGGTGTTCAAGGCCAA...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCGAGAGACCCGGGCTCTaGAGCACGGCCTCCGCATTG +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCERPGL*STASAL
Trigger: CAATGCGGAGGCCGTGCTGCAGAGCCCGGGTCTCTC...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp TTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCGAGAGACCCGGGCTCTaGAGCACGGCCTCCGCATTG +
Preference number: 4 (lower is better)
Translates to: LAAMNSSRLVSLPMPEGSERPGL*STASAL
Trigger: CAATGCGGAGGCCGTGCTGCAGAGCCCGGGTCTCTC...GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCAGCGACATGGGCGGCTaGCGCGGCAGGAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCSDMGG*RGRKSA
Trigger: TGCGCTTTTCCTGCCGCGGCAGCCGCCCATGTCGCT...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTAGCGACATGGGCGGCTaGCGCGGCAGGAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPSDMGG*RGRKSA
Trigger: TGCGCTTTTCCTGCCGCGGCAGCCGCCCATGTCGCT...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCCACTCCTCCATCAGCTaGTCCGCCTCGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASHSSIS*SASASD
Trigger: GTCGCTGGCCGAGGCGGAGCAGCTGATGGAGGAGTG...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGTGGCTGCTTCTCCTCTaGCTCAGCGGTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGWLLLL*LSGCFL
Trigger: GAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCA...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGGGTGCAGAGGGCGCTaGCGTTGGTGCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGGCRGR*RWCGSG
Trigger: ACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCC...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCGGGTGCAGAGGGCGCTaGCGTTGGTGCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASGCRGR*RWCGSG
Trigger: ACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCC...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCGGGTGCAGAGGGCGCTaGCGTTGGTGCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPGCRGR*RWCGSG
Trigger: ACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCC...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp CTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTTCCTTGGACCGCATGTaGTGGATATATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLIALADQAQPARPLMFLSLDRM*WIYTWQ
Trigger: CTGCCAGGTATATATCCAGCACATGCGGTCCAAGGA...AAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GCTGGTTCTGCAGCGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGCGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: AGSAARSRCCTTQRHGLRRVKAC*SLPLRT
Trigger: GGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCG...CCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCTGCAGAACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GAAAHVPWTACAGYIPGRQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...CCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGACTCCCAGCTGCAGCTaGAGCCACGGTAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVTPSCS*SHGSRR
Trigger: TCTCCTGCTACCGTGGCTGCAGCTGCAGCTGGGAGT...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000545457.6
ENST00000578558.5
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACGGGCCCACTCCCAGCTaGAGCTGCAGCCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHGPTPS*SCSHGS
Trigger: GCTACCGTGGCTGCAGCTGCAGCTGGGAGTGGGCCC...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000545457.6
ENST00000578558.5
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGGCCCACTCCCAGCTaGAGCTGCAGCCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPEGPTPS*SCSHGS
Trigger: GCTACCGTGGCTGCAGCTGCAGCTGGGAGTGGGCCC...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000545457.6
ENST00000578558.5
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGGCAGCGATGGCAGGCTaGACAGCTCCCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLAAMAG*TAPHEA
Trigger: CGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGC...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACGATGGCGCGCAGCGATaGCAGGCTGGACAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHDGAQR*QAGQLP
Trigger: GGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCATC...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGGATGGCGCGCAGCGATaGCAGGCTGGACAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQDGAQR*QAGQLP
Trigger: GGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCATC...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GCAGTCAGCCTCGTAGAACTTGCCGTGGAAGGCTTCCTCCACCAGCACAGGCACGCACCAGCATGTTCTTaGCGTTCTCCAGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: AVSLVELAVEGFLHQHRHAPACS*RSPAPA
Trigger: CGCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGC...GTGCCTGTGCTGGTGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTGACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp ACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: THWSMHRDSSVIWLLLRLLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...CAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CCA 90 bp AACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAAGTCCTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NSSRLVSLPMPEGSPSKSLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...GGACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGCTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RDRFRVSTCTHWSMHRDSSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...GCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGASDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCATCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AMNSSRLVSLPMPEGSPSSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...TGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CCA 90 bp CGGGGACTCCGGAATTCTTCAGACTGTTGGCTCGGGCCACGATGGCGCGCAGCGGAAATGGATGGCTTCTaGGAGGGTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: RGLRNSSDCWLGPRWRAAEMDGF*EGHQVV
Trigger: AACCACCTGGTGACCCTCCCAGAAGCCATCCATTTC...CGCTGCGCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTCCGGAGTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGCCGTCAGGAAATGGATaGCTTCTGGGAGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: AGWGGCTDTRAPVSGHCRPSGNG*LLGGSP
Trigger: TGGTGACCCTCCCAGAAGCCATCCATTTCCTGACGG...CCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGGCTTCTCCAGGCCCTaGTCCCAACGCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERGFSRP*SQRRTF
Trigger: GAAGGTGCGGCGTTGGGACCAGGGCCTGGAGAAGCC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCAGTCCGGGCAGCTaGCCCACGTCCTCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRVSPGS*PTSSVK
Trigger: CTTCACGGAGGACGTGGGCCAGCTGCCCGGACTGAC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGCAAAGAGCCTGGCCTTaGTGGTGCTGCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGQRAWP*WCCSVW
Trigger: CCACACTGAGCAGCACCACCAAGGCCAGGCTCTTTG...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGCCTCCCAGAACTCTaGGAGCTCCTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTCLPEL*ELLALH
Trigger: GTGCAGGGCCAGGAGCTCCCAGAGTTCTGGGAGGCA...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACCCTCGGCCAGCGACATaGGCGGCTGCCGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHPRPAT*AAAAAG
Trigger: TCCTGCCGCGGCAGCCGCCCATGTCGCTGGCCGAGG...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGATCTGGTAGAGGCTaGGCTGTTGGGCGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTGSGRG*AVGRPG
Trigger: TCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCC...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGGATCTGGTAGAGGCTaGGCTGTTGGGCGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHGSGRG*AVGRPG
Trigger: TCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGGGATCTGGTAGAGGCTaGGCTGTTGGGCGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLGSGRG*AVGRPG
Trigger: TCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCC...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGGGGACTCCGGAATTCTTCAGACTGTTGGCTCGGGCCACGATGGCGCGCAGCGCACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: RGLRNSSDCWLGPRWRAAHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...CGCTGCGCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTCCGGAGTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCGGGGACAGCGAGCCTTaGGTGATGACCCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASGDSEP*VMTLPC
Trigger: GCAGGGCAGGGTCATCACCCAAGGCTCGCTGTCCCC...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS-3UTR CCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATCAGGGCCGTCATCGCTaGGAGCTGCCTGTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHQGRHR*ELPVVA
Trigger: AGCCACAACAGGCAGCTCCCAGCGATGACGGCCCTG...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545457.6
ENST00000638404.1
CDS-3UTR CCA 90 bp TCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGCAGGGCCGTCATCGCTaGGAGCGGAGCTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: SGQVQSFHVHPLVYAQGQQGRHR*ERSCAC
Trigger: GCATGCACAGCTCCGCTCCCAGCGATGACGGCCCTG...CTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581401.1
ENST00000639299.1
3UTR CAA 72 bp AGGCTGGGCTGTTGGGCGCCCTGGACCGCCTTCCTCTaGCCCCGGTGGATGATGAACTTCCTCTTGAAATGG +
Preference number: 4 (lower is better)
Translates to: RLGCWAPWTAFL*PRWMMNFLLKW
Trigger: CCATTTCAAGAGGAAGTTCATCATCCACCGGGGCAAGAGGAAGGCGGTCCAGGGCGCCCAACAGCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCCAGGCGGTTCTCGCTaGGGTCCAGGTATAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVPGGSR*GPGIVG
Trigger: ACCTACTATACCTGGACCTCAGCGAGAACCGCCTGG...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGCCAGGCGGTTCTCGCTaGGGTCCAGGTATAGTAGGT +
Preference number: 4 (lower is better)
Translates to: QTLGHPCQVIAGQIHVCEPGGSR*GPGIVG
Trigger: ACCTACTATACCTGGACCTCAGCGAGAACCGCCTGG...CTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCCCAGGCGGTTCTCGCTaGGGTCCAGGTATAGTAGGT +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPPGGSR*GPGIVG
Trigger: ACCTACTATACCTGGACCTCAGCGAGAACCGCCTGG...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TCTHWSMHRDSSVIWLLLAGGFH*ARASAG
Trigger: ACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGC...CAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR TCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTAGGFH*ARASAG
Trigger: ACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGC...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGCGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: RDRFRVSTCTHWSMHRDSAGGFH*ARASAG
Trigger: ACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGC...GCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR TCA 90 bp TGTGCATGCAGCAGGGGGTTTCCATTGAGCACGAGCGTCTGCAGGTGCACCAGGCTGAGGGCAGTGAGGTaGGCTGATTTCGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: CACSRGFPLSTSVCRCTRLRAVR*ADFGTG
Trigger: ACCTGTCCCGAAATCAGCTCACCTCACTGCCCTCAG...CCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp CAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGCTGAGGGCAGTGAGGTaGGCTGATTTCGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: QTLGHPCQVIAGQIHVCELRAVR*ADFGTG
Trigger: ACCTGTCCCGAAATCAGCTCACCTCACTGCCCTCAG...CTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR TCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTCTGAGGGCAGTGAGGTaGGCTGATTTCGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCLRAVR*ADFGTG
Trigger: ACCTGTCCCGAAATCAGCTCACCTCACTGCCCTCAG...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGAGCTTGCCAATGCCTaGGGGCAGCCCGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHELANA*GQPVKV
Trigger: GACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCGAGCTTGCCAATGCCTaGGGGCAGCCCGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPELANA*GQPVKV
Trigger: GACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTC...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCGAGCTTGCCAATGCCTaGGGGCAGCCCGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCELANA*GQPVKV
Trigger: GACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTC...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCGGGCTTGGGCGGCATaGCCAGGTTGGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFRAWAA*PGWGSP
Trigger: GGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCG...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTCTGGTCATCCTGGGCTaGATCCTTGCGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGLVILG*ILAPPQ
Trigger: CTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAG...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCTGGTCATCCTGGGCTaGATCCTTGCGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRLVILG*ILAPPQ
Trigger: CTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCCTGGTCATCCTGGGCTaGATCCTTGCGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASLVILG*ILAPPQ
Trigger: CTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAG...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTCTCCTGGGCAACATCTaGCATGCCCTTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAALLGNI*HALQHL
Trigger: CAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAG...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGCTCCTGGGCAACATCTaGCATGCCCTTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: GHPCQVIAGQIHVCEVAQLLGNI*HALQHL
Trigger: CAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAG...CTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCCTCCTGGGCAACATCTaGCATGCCCTTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: GRVYRHSGTRVRSLQDRSLLGNI*HALQHL
Trigger: CAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAG...GGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTGGCCCACGTCCTCCGTaGAGAACTCGGAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAGPRPP*RTRSSQ
Trigger: TTGACTACTCCGAGTTCTTCACGGAGGACGTGGGCC...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCACGATACATCCTGGTaGCATAGTGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SLPLRTRRSRRGRSCSLDHDTSW*HSVCLP
Trigger: TGGAAGACACACACTATGTCACCAGGATGTATCGTG...GTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTCCAGAGAGGTCCCCTTaGGGGGCACAGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPPERSP*GAQAPT
Trigger: AGTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGG...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGCCAGAGAGGTCCCCTTaGGGGGCACAGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: SGQVQSFHVHPLVYAQGQPERSP*GAQAPT
Trigger: AGTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGG...CTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCAGAGAGGTCCCCTTaGGGGGCACAGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIPERSP*GAQAPT
Trigger: AGTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGG...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCCTGCACCAGCAGTGTaGTCTCAGCCTTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVPAPAV*SQPSLS
Trigger: GGAAAGGGAAGGCTGAGATCACACTGCTGGTGCAGG...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTCAGGCACGTGCTTCTTaGTCTCAGAGGGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTQARAS*SQRAPH
Trigger: GTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTG...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp CGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGCCAGGCACGTGCTTCTTaGTCTCAGAGGGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RDRFRVSTCTHWSMHRDSQARAS*SQRAPH
Trigger: GTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTG...GCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGTGCGGCCGAGCCAGATaGACACGTCGGACCAACAGT +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALCGRAR*TRRTNS
Trigger: ACTGTTGGTCCGACGTGTTCATCTGGCTCGGCCGCA...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GTTGTCAAACACCTGCAGGAACTCCTCGCTCTCATCGCCCATCTCCTCCCGGACTGCGGCCGAGCCAGATaGACACGTCGGACCAACAGT +
Preference number: 4 (lower is better)
Translates to: VVKHLQELLALIAHLLPDCGRAR*TRRTNS
Trigger: ACTGTTGGTCCGACGTGTTCATCTGGCTCGGCCGCA...GTCCGGGAGGAGATGGGCGATGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACATCCCGCACAGCTCCTaGCCCAGCTTGAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHIPHSS*PSLRAA
Trigger: TGCCGCCCTCAAGCTGGGTCAGGAGCTGTGCGGGAT...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATCCCGCACAGCTCCTaGCCCAGCTTGAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWIPHSS*PSLRAA
Trigger: TGCCGCCCTCAAGCTGGGTCAGGAGCTGTGCGGGAT...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCTCGAGGCTGCGGCTaGCCGTGGCATGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPRGCG*PWHGVA
Trigger: GGCCACGCCATGCCACGGTCAGCCGCAGCCTCGAGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGGCAGGAAAAGCGCAGTaGGGTCAGCCTTCATCTGGT +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGAGKAQ*GQPSSG
Trigger: ACCAGATGAAGGCTGACCTCACTGCGCTTTTCCTGC...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCGGCTGGAGTCGGTGTTaGTCTGGATGCACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASGWSRC*SGCTGC
Trigger: GCACCCGGTGCATCCAGATCAACACCGACTCCAGCC...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGATTTCCCAGACCCCTaGGGGCACCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALDFPDP*GHLSGS
Trigger: TGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGATTTCCCAGACCCCTaGGGGCACCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGADFPDP*GHLSGS
Trigger: TGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATC...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCGATTTCCCAGACCCCTaGGGGCACCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCDFPDP*GHLSGS
Trigger: TGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATC...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGGTAGCAGAGGCCAGTaGGGTTCAGCTTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHGSRGQ*GSASAT
Trigger: GGTGGCTGAAGCTGAACCGCACTGGCCTCTGCTACC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGAAGTGTTCCAGCTTCTaGAGGGCGGCCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALKCSSF*RAASSS
Trigger: CGAGGAGCTGGCCGCCCTGCAGAAGCTGGAACACTT...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAAGTGTTCCAGCTTCTaGAGGGCGGCCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLKCSSF*RAASSS
Trigger: CGAGGAGCTGGCCGCCCTGCAGAAGCTGGAACACTT...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHTSVCR*TRRRIC
Trigger: GCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGT...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR GCA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGTSVCR*TRRRIC
Trigger: GCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGT...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: FRDRFRVSTCTHWSMHRDTSVCR*TRRRIC
Trigger: GCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGT...GTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCTTGAGCACGAGCGTCTaGAGGTGCACCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGLSTSV*RCTRRR
Trigger: GCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAA...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACATTGAGCACGAGCGTCTaGAGGTGCACCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: FGTGSEFPRAPTGLCTGTLSTSV*RCTRRR
Trigger: GCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAA...TGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp TATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCAGTGCCGGAGCTGTGCATaGAGCAGGGGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: YAQGQLRDLVAAEVEAAQCRSCA*SRGFPL
Trigger: CAATGGAAACCCCCTGCTGCATGCACAGCTCCGGCA...CTGCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGCCGGAGCTGTGCATaGAGCAGGGGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAACRSCA*SRGFPL
Trigger: CAATGGAAACCCCCTGCTGCATGCACAGCTCCGGCA...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGTGCCGGAGCTGTGCATaGAGCAGGGGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLCRSCA*SRGFPL
Trigger: CAATGGAAACCCCCTGCTGCATGCACAGCTCCGGCA...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCGAGCTGCCGGAGCTGTaGATGCAGCAGGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIELPEL*MQQGVS
Trigger: GGAAACCCCCTGCTGCATGCACAGCTCCGGCAGCTC...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAAGTCCGAGCTGCCGGAGCTGTaGATGCAGCAGGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: NSSRLVSLPMPEGSPSKSELPEL*MQQGVS
Trigger: GGAAACCCCCTGCTGCATGCACAGCTCCGGCAGCTC...GGACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGAGCTGCCGGAGCTGTaGATGCAGCAGGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRELPEL*MQQGVS
Trigger: GGAAACCCCCTGCTGCATGCACAGCTCCGGCAGCTC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: DGFWEGHQVVLVQDKFPQRRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...CTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGTGAGCTGATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GELISGQVQSFHVHPLVYRRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...ATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAATCAGCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp CCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGACTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: PGGSCSGQVSSALGTCRDWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...GTCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: HQVVLVQDKFPQLWAPAEGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...CTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GHQVVLVQDKFPQLWAPAGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...TGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LAAMNSSRLVSLPMPEGSPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCCCGTGTCAGGTCATTaGAGGACAGATCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRPVSGH*RTDPRL
Trigger: CAGACGTGGATCTGTCCTGCAATGACCTGACACGGG...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCCCTGCAGCTGCAGCTaGAGCCACGGTAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPPCSCS*SHGSRR
Trigger: TCTCCTGCTACCGTGGCTGCAGCTGCAGCTGCAGGG...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000327031.9
ENST00000638207.2
CDS-3UTR GCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCCTGCAGCTGCAGCTaGAGCCACGGTAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRAPCSCS*SHGSRR
Trigger: TCTCCTGCTACCGTGGCTGCAGCTGCAGCTGCAGGG...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000638207.2
ENST00000639036.1
CDS-3UTR GCA 90 bp TGTAGCAGTCAGCCTCGTAGAACTTGCCGTGGAAGGCTTCCTCCACCAGCACAGCCCTGCAGCTGCAGCTaGAGCCACGGTAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: CSSQPRRTCRGRLPPPAQPCSCS*SHGSRR
Trigger: TCTCCTGCTACCGTGGCTGCAGCTGCAGCTGCAGGG...CTGTGCTGGTGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTGACTGCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACTTGGGCCCACTCCCTaGAGCTGCAGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRLGPTP*SCSCSH
Trigger: GTGGCTGCAGCTGCAGCTGCAGGGAGTGGGCCCAAG...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327031.9
ENST00000638207.2
CDS-3UTR GCA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCCTTGGGCCCACTCCCTaGAGCTGCAGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGLGPTP*SCSCSH
Trigger: GTGGCTGCAGCTGCAGCTGCAGGGAGTGGGCCCAAG...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCCCTGGGCTGAATCCTTaGGCCTCCGCAGTCGCATCT +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTPGLNP*ASAVAS
Trigger: AGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGG...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCCCTGGGCTGAATCCTTaGGCCTCCGCAGTCGCATCT +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPPGLNP*ASAVAS
Trigger: AGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGG...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGATGCCCTTCAGCACCTaGTTGGCCTGGTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVMPFST*LAWSSW
Trigger: CCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCAT...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTATGCCCTTCAGCACCTaGTTGGCCTGGTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAMPFST*LAWSSW
Trigger: CCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCAT...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTATGCCCTTCAGCACCTaGTTGGCCTGGTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCMPFST*LAWSSW
Trigger: CCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCAT...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATGGGCAACATCTGACATaGCCTTCAGCACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RRSRRGRSCSLDRMCWIYGQHLT*PSAPAW
Trigger: CCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCC...ATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTGGGGGCCCGGGCATCTaGGCTCTCCTCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILGGPGI*ALLLLF
Trigger: AAAAAGCAGGAGGAGAGCGCAGATGCCCGGGCCCCC...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGGGGGCCCGGGCATCTaGGCTCTCCTCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRGGPGI*ALLLLF
Trigger: AAAAAGCAGGAGGAGAGCGCAGATGCCCGGGCCCCC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGCAGCCTCGTAGAACTTaGCGTGGAAGGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGQPRRT*RGRLPP
Trigger: TGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTG...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGATCTCCTCCCGGACAGTaGGGCACTCAGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERSPPGQ*GTQHPG
Trigger: ACCTGGGTGCTGAGTGCCGCACTGTCCGGGAGGAGA...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTTCTCCTCCCGGACAGTaGGGCACTCAGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGSPPGQ*GTQHPG
Trigger: ACCTGGGTGCTGAGTGCCGCACTGTCCGGGAGGAGA...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCATCTCCTCCCGGACAGTaGGGCACTCAGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRASPPGQ*GTQHPG
Trigger: ACCTGGGTGCTGAGTGCCGCACTGTCCGGGAGGAGA...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGGGCTCCCCACCCAGTaGCTCCCAGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRGLPTQ*LPELWE
Trigger: CTCCCAGAGTTCTGGGAGGCACTGGGTGGGGAGCCC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp CGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGGCTTGGGCGGCATTCCACCTTGGGACGCTaGTTATGTTCCACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: REVDVVPLSGTVCGLGRHSTLGR*LCSTES
Trigger: GCTCTCCGTGGAACATAAGCAGCGTCCCAAGGTGGA...ATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TGTGCATGCAGCAGGGGGTTTCCATTGAGCACGAGCGTCTGCAGGTGCACCAGGGTGTCCAGCAGACTCTaGAGCAGCCGCATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: CACSRGFPLSTSVCRCTRVSSRL*SSRILG
Trigger: GCCAAGAATGCGGCTGCTGCAGAGTCTGCTGGACAC...CCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTGCATGGCGTGGCCGGTaGAGCATCCCGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFAWRGR*SIPHSS
Trigger: GGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGC...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCTTGGCCTTGAACACCTaGGCCTCGGTGCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPLALNT*ASVPSR
Trigger: CCTCGAGGGCACCGAGGCGCAGGTGTTCAAGGCCAA...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGATTGGCCTTGAACACCTaGGCCTCGGTGCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERLALNT*ASVPSR
Trigger: CCTCGAGGGCACCGAGGCGCAGGTGTTCAAGGCCAA...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCGCACGGCCTCCGCATTaGGTGTGTAGTCCACCGTCA +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCARPPH*VCSPPS
Trigger: TGACGGTGGACTACACACGCAATGCGGAGGCCGTGC...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGCACGGCCTCCGCATTaGGTGTGTAGTCCACCGTCA +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTARPPH*VCSPPS
Trigger: TGACGGTGGACTACACACGCAATGCGGAGGCCGTGC...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCGCACGGCCTCCGCATTaGGTGTGTAGTCCACCGTCA +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTARPPH*VCSPPS
Trigger: TGACGGTGGACTACACACGCAATGCGGAGGCCGTGC...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTGAGAGACCCGGGCTCTaGAGCACGGCCTCCGCATTG +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAERPGL*STASAL
Trigger: CAATGCGGAGGCCGTGCTGCAGAGCCCGGGTCTCTC...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGGAGAGACCCGGGCTCTaGAGCACGGCCTCCGCATTG +
Preference number: 4 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQERPGL*STASAL
Trigger: CAATGCGGAGGCCGTGCTGCAGAGCCCGGGTCTCTC...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCCACTCCTCCATCAGCTaGTCCGCCTCGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGHSSIS*SASASD
Trigger: GTCGCTGGCCGAGGCGGAGCAGCTGATGGAGGAGTG...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCGGCCAGAAGTCTTCAGGCACGTGCTTCTTGATCTCAGAGGGCTCCCCACCCCAGGCACCCAGTACCTaGAGAGGAAGACGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GGQKSSGTCFLISEGSPPQAPST*RGRRSS
Trigger: ACTGCTACGTCTTCCTCTGCAGGTACTGGGTGCCTG...GGGTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTTCTGGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGCTTCCTCGCCTTCTTTaGCCTCGGCCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLLPRLL*PRPSPP
Trigger: AGGAGGAGAAGGCCGAGGGCAAAGAAGGCGAGGAAG...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTCTCTGCCTCAGCGGTTaGTTCCTCGCCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAALCLSG*FLAFFA
Trigger: GGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAG...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCCTCTGCCTCAGCGGTTaGTTCCTCGCCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPLCLSG*FLAFFA
Trigger: GGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAG...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTAAGTCCTCCTCTGGCTaGTTCTCCTCTGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: AAGAAAHVPWTACAGYIPKSSSG*FSSASA
Trigger: CGCTGAGGCAGAGGAGAAGCAGCCAGAGGAGGACTT...AGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGAGGCTTCACGGCCCTaGCAGAAGTACACGATGCAC +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCEASRP*QKYTMH
Trigger: GTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATCCTGCTGCTGCGTCATaGGTACCACCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHPAAAS*VPPPAS
Trigger: GGAAGCTGGAGGTGGTACGCATGACGCAGCAGCAGG...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTTGGGGTTCTCCTGCTaGTGCGTCATGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAALGFSC*CVMRTT
Trigger: GGTGGTACGCATGACGCAGCAGCAGGAGAACCCCAA...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCATTGGGGTTCTCCTGCTaGTGCGTCATGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: PARPLMFLGPHVLDIYLALGFSC*CVMRTT
Trigger: GGTGGTACGCATGACGCAGCAGCAGGAGAACCCCAA...TGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGGGGCGCTGCCGTTGGTaGGGATCTGGTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQGRCRW*GSGRGW
Trigger: CCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCC...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACGGGCGCTGCCGTTGGTaGGGATCTGGTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FRDRFRVSTCTHWSMHRDGRCRW*GSGRGW
Trigger: CCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCC...GTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGGGTGCAGAGGGCGCTaGCGTTGGTGCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRGCRGR*RWCGSG
Trigger: ACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGTCTGGATGCACCGGGTaGAGAGGGCGCTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVSGCTG*RGRCRW
Trigger: CCAACGGCAGCGCCCTCTGCACCCGGTGCATCCAGA...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCAGGCGTGCTGCTCATTaGCCTTGCGGACCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCRRAAH*PCGPGA
Trigger: TGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCT...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGGCGTGCTGCTCATTaGCCTTGCGGACCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGRRAAH*PCGPGA
Trigger: TGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCT...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCCGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTRVKAC*SLPLRT
Trigger: GGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCG...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCCGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCRVKAC*SLPLRT
Trigger: GGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCG...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCCGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPRVKAC*SLPLRT
Trigger: GGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCG...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGACCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGGATGGCGCGCAGCGATaGCAGGCTGGACAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMDGAQR*QAGQLP
Trigger: GGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCATC...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGAGATGGCGCGCAGCGATaGCAGGCTGGACAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: ISGQVQSFHVHPLVYAQGDGAQR*QAGQLP
Trigger: GGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCATC...TCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGAATTCTTCAGACTGTTaGCTCGGGCCACGATGGCGC +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRNSSDC*LGPRWR
Trigger: GCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATT...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGACCAGGGCCGTCATCGCTaGGAGCTGCCGGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PGGSCSGQVSSALGTCRDQGRHR*ELPELC
Trigger: GCACAGCTCCGGCAGCTCCCAGCGATGACGGCCCTG...GTCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GHQVVLVQDKFPQLWAPAVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...TGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTTTGGCCTGGTCATCCTaGGCTGAATCCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCLAWSS*AESLRL
Trigger: GAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAA...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGAGCACCTGCTTGGCCTaGTCATCCTGGGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLSTCLA*SSWAES
Trigger: GGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCT...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTAGCACCTGCTTGGCCTaGTCATCCTGGGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAASTCLA*SSWAES
Trigger: GGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCT...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCAGCACCTGCTTGGCCTaGTCATCCTGGGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: SMHRDSSVIWLLLRLRRRSTCLA*SSWAES
Trigger: GGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCT...GCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTAGCACCTGCTTGGCCTaGTCATCCTGGGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCSTCLA*SSWAES
Trigger: GGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCT...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGGCTTCTCCAGGCCCTaGTCCCAACGCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRGFSRP*SQRRTF
Trigger: GAAGGTGCGGCGTTGGGACCAGGGCCTGGAGAAGCC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTGGCTTCTCCAGGCCCTaGTCCCAACGCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAGFSRP*SQRRTF
Trigger: GAAGGTGCGGCGTTGGGACCAGGGCCTGGAGAAGCC...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGTCAGTCCGGGCAGCTaGCCCACGTCCTCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRVSPGS*PTSSVK
Trigger: CTTCACGGAGGACGTGGGCCAGCTGCCCGGACTGAC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TGTGCATGCAGCAGGGGGTTTCCATTGAGCACGAGCGTCTGCAGGTGCACCAGGTCTCTATCTGCCAGATaGTCAGTCCGGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CACSRGFPLSTSVCRCTRSLSAR*SVRAAG
Trigger: GCCAGCTGCCCGGACTGACCATCTGGCAGATAGAGA...CCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGCTTTCTTGTCGAGTGTaGCCTCCCCGCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGLSCRV*PPRQSS
Trigger: ACTGGATTGGCGGGGAGGCCACACTCGACAAGAAAG...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTTTCTTGTCGAGTGTaGCCTCCCCGCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRLSCRV*PPRQSS
Trigger: ACTGGATTGGCGGGGAGGCCACACTCGACAAGAAAG...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGAACTCTGGGAGCTCCTaGCCCTGCACCAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALNSGSS*PCTSSV
Trigger: CACACTGCTGGTGCAGGGCCAGGAGCTCCCAGAGTT...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTTGCCTCCCAGAACTCTaGGAGCTCCTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGCLPEL*ELLALH
Trigger: GTGCAGGGCCAGGAGCTCCCAGAGTTCTGGGAGGCA...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCCCACCTTGTACAGCTTaGGCTGCGGCGGCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCPPCTA*AAAARS
Trigger: ACTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGG...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCCACCTTGTACAGCTTaGGCTGCGGCGGCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAPPCTA*AAAARS
Trigger: ACTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCTCGGCCAGCGACATaGGCGGCTGCCGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPRPAT*AAAAAG
Trigger: TCCTGCCGCGGCAGCCGCCCATGTCGCTGGCCGAGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCGGCCAGCGACATaGGCGGCTGCCGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLPRPAT*AAAAAG
Trigger: TCCTGCCGCGGCAGCCGCCCATGTCGCTGGCCGAGG...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTGGATCTGGTAGAGGCTaGGCTGTTGGGCGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILGSGRG*AVGRPG
Trigger: TCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCC...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CAGCTTGATCTCCACCTGGCTAGTCTGGGTCCCCACCCACATGTAGACCTCTTGAGAGGGCGCTGCCGTTaGTGCGGATCTGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: QLDLHLASLGPHPHVDLLRGRCR*CGSGRG
Trigger: GCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCT...CAAGAGGTCTACATGTGGGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GATCTCCACCTGGCTAGTCTGGGTCCCCACCCACATGTAGACCTCTTGGCCATTAGAGGGCGCTGCCGTTaGTGCGGATCTGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: DLHLASLGPHPHVDLLAIRGRCR*CGSGRG
Trigger: GCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCT...AATGGCCAAGAGGTCTACATGTGGGTGGGGACCCAGACTAGCCAGGTGGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGAGCTTGATCTCCACCTaGCTAGTCTGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: GAAAHVPWTACAGYIPGRSLIST*LVWVPT
Trigger: GGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCT...CCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRAGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGALWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGGCTTGGGCGGCATCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: REVDVVPLSGTVCGLGRHQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...ATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGGCCCATGGGAGCCTTTaGGGAGCCACAGAACCAACT +
Preference number: 4 (lower is better)
Translates to: GHPCQVIAGQIHVCEVAQAHGSL*GATEPT
Trigger: AGTTGGTTCTGTGGCTCCCCAAAGGCTCCCATGGGC...CTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCCGGCCGCAGTCCCTaGGACACGCAGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPGRSP*DTQGLE
Trigger: CTCCAGGCCCTGCGTGTCCCAGGGACTGCGGCCGGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579294.5
ENST00000638812.1
CDS-3UTR TCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGCTGGTCATGGCCTTaGCATTCTCAGGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLGWSWP*HSQGSS
Trigger: GCTACTTCCCTGAGAATGTCAAGGCCATGACCAGCC...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCGGCTGGTCATGGCCTTaGCATTCTCAGGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SMHRDSSVIWLLLRLRRRGWSWP*HSQGSS
Trigger: GCTACTTCCCTGAGAATGTCAAGGCCATGACCAGCC...GCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCAGGFH*ARASAG
Trigger: ACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGC...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR TCA 90 bp CAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: QTLGHPCQVIAGQIHVCEGSEVS*FRDRFR
Trigger: TCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCC...CTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR TCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATCTGAGGGCAGTGAGGTaGGCTGATTTCGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHLRAVR*ADFGTG
Trigger: ACCTGTCCCGAAATCAGCTCACCTCACTGCCCTCAG...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGGGCACCTGCAGAGACTTTCAGGGACCAGCTCCAGGTTGTTGTTGGCAGCCATGAGCTTGCCAATGCCTaGGGGCAGCCCGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: WAPAETFRDQLQVVVGSHELANA*GQPVKV
Trigger: GACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTC...ATGGCTGCCAACAACAACCTGGAGCTGGTCCCTGAAAGTCTCTGCAGGTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCGAGCTTGCCAATGCCTaGGGGCAGCCCGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASELANA*GQPVKV
Trigger: GACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTC...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAAGTCCGAGCTTGCCAATGCCTaGGGGCAGCCCGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: NSSRLVSLPMPEGSPSKSELANA*GQPVKV
Trigger: GACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTC...GGACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATCTCCTGGGCAACATCTaGCATGCCCTTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHLLGNI*HALQHL
Trigger: CAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAG...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTAGTAGATCTCCCAGTTaGGGGAGCCGCTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAASRSPS*GSRCHP
Trigger: TGGATGACAGCGGCTCCCTCAACTGGGAGATCTACT...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGGTAGTTGCGCAAGTTaGCAGCGTGGATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAGSCAS*QRGWQS
Trigger: GCTCTGCCATCCACGCTGTCAACTTGCGCAACTACC...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTCCAGAGAGGTCCCCTTaGGGGGCACAGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFPERSP*GAQAPT
Trigger: AGTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGG...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCAGGCACGTGCTTCTTaGTCTCAGAGGGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGQARAS*SQRAPH
Trigger: GTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTG...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCTGCGGCCGAGCCAGATaGACACGTCGGACCAACAGT +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGCGRAR*TRRTNS
Trigger: ACTGTTGGTCCGACGTGTTCATCTGGCTCGGCCGCA...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCTCCTGACCCAGCTTaGGGGCGGCAGCGCGCACCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAPDPA*GRQRAP
Trigger: TGGTGCGCGCTGCCGCCCTCAAGCTGGGTCAGGAGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGGCTGGAGTCGGTGTTaGTCTGGATGCACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVGWSRC*SGCTGC
Trigger: GCACCCGGTGCATCCAGATCAACACCGACTCCAGCC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCAGCAGAACTCGGAGTTaGGGAGGCTGGAGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCSRTRS*GGWSRC
Trigger: ACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCT...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTAGCAGAACTCGGAGTTaGGGAGGCTGGAGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTSRTRS*GGWSRC
Trigger: ACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCT...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATAGCAGAACTCGGAGTTaGGGAGGCTGGAGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHSRTRS*GGWSRC
Trigger: ACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCT...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGCTTCGTCAGGGTCTaGTGCCCGGCCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGFVRV*CPAHPG
Trigger: GCCTGGGTGGGCCGGGCATCAGACCCTGACGAAGCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR TCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCGATTTCCCAGACCCCTaGGGGCACCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCDFPDP*GHLSGS
Trigger: TGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATC...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGATTTCCCAGACCCCTaGGGGCACCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGDFPDP*GHLSGS
Trigger: TGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATC...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GCAGAACTCGGAGTTGAGGAGGCTGGAGTCGGTGTTGATCTGGATGCACCGGGTGGAAGGATGTCAAGGTaGAGCACAGAGCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AELGVEEAGVGVDLDAPGGRMSR*STEPLL
Trigger: GAGCAGGGGCTCTGTGCTTCACCTTGACATCCTTCC...ACCCGGTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCGCTGCCTGTTGTGGCTaGGGTTCAGCACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPAACCG*GSAPAC
Trigger: ACATGCTGGTGCTGAACCTCAGCCACAACAGGCAGC...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545457.6
ENST00000638404.1
CDS-3UTR GCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTGGTAGCAGAGGCCAGTaGGGTTCAGCTTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGGSRGQ*GSASAT
Trigger: GGTGGCTGAAGCTGAACCGCACTGGCCTCTGCTACC...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAGGTAGCAGAGGCCAGTaGGGTTCAGCTTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGGSRGQ*GSASAT
Trigger: GGTGGCTGAAGCTGAACCGCACTGGCCTCTGCTACC...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTAAGTGTTCCAGCTTCTaGAGGGCGGCCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILKCSSF*RAASSS
Trigger: CGAGGAGCTGGCCGCCCTGCAGAAGCTGGAACACTT...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTAAGTGTTCCAGCTTCTaGAGGGCGGCCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGKCSSF*RAASSS
Trigger: CGAGGAGCTGGCCGCCCTGCAGAAGCTGGAACACTT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCAAGTGTTCCAGCTTCTaGAGGGCGGCCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCKCSSF*RAASSS
Trigger: CGAGGAGCTGGCCGCCCTGCAGAAGCTGGAACACTT...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: GHQVVLVQDKFPQLWAPATSVCR*TRRRIC
Trigger: GCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGT...TGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGTGAGCTGATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATTTGAGCACGAGCGTCTaGAGGTGCACCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GELISGQVQSFHVHPLVYLSTSV*RCTRRR
Trigger: GCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAA...ATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAATCAGCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGAGCACCGGAAGAGACTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: SISQSLQSSPSRWSTGRDWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...GTCTCTTCCGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: QVVVGSHELFQVGELANAAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FRDRFRVSTCTHWSMHRDPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...GTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TCCACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: STCTHWSMHRDSSVIWLLGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...CAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGCCCGTGTCAGGTCATTaGAGGACAGATCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLPVSGH*RTDPRL
Trigger: CAGACGTGGATCTGTCCTGCAATGACCTGACACGGG...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTCCCACTCCCTGCAGCTaGAGCTGCAGCCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTPTPCS*SCSHGS
Trigger: GCTACCGTGGCTGCAGCTGCAGCTGCAGGGAGTGGG...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327031.9
ENST00000638207.2
CDS-3UTR GCA 90 bp GATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTGGGCCCACTCCCTaGAGCTGCAGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: DGFWEGHQVVLVQDKFPQLGPTP*SCSCSH
Trigger: GTGGCTGCAGCTGCAGCTGCAGGGAGTGGGCCCAAG...CTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CAGCTTGATCTCCACCTGGCTAGTCTGGGTCCCCACCCACATGTAGACCTCTTGCCTGGGCTGAATCCTTaGGCCTCCGCAGTCGCATCT +
Preference number: 4 (lower is better)
Translates to: QLDLHLASLGPHPHVDLLPGLNP*ASAVAS
Trigger: AGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGG...CAAGAGGTCTACATGTGGGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCCCTGGGCTGAATCCTTaGGCCTCCGCAGTCGCATCT +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVPGLNP*ASAVAS
Trigger: AGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGG...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTGGGCAACATCTGACATaGCCTTCAGCACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAGQHLT*PSAPAW
Trigger: CCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCC...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGGGGGCCCGGGCATCTaGGCTCTCCTCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRGGPGI*ALLLLF
Trigger: AAAAAGCAGGAGGAGAGCGCAGATGCCCGGGCCCCC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGGCTTGGGCGGCATACGAAGTTCTCTATCTaGCAGATGGTCAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: REVDVVPLSGTVCGLGRHTKFSI*QMVSPG
Trigger: GCCCGGACTGACCATCTGGCAGATAGAGAACTTCGT...ATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGATCTCCTCCCGGACAGTaGGGCACTCAGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRSPPGQ*GTQHPG
Trigger: ACCTGGGTGCTGAGTGCCGCACTGTCCGGGAGGAGA...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTGGGCTCCCCACCCAGTaGCTCCCAGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTGLPTQ*LPELWE
Trigger: CTCCCAGAGTTCTGGGAGGCACTGGGTGGGGAGCCC...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGTCCACCTTGGGACGCTaGTTATGTTCCACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GHPCQVIAGQIHVCEVAQSTLGR*LCSTES
Trigger: GCTCTCCGTGGAACATAAGCAGCGTCCCAAGGTGGA...CTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGTGTCCAGCAGACTCTaGAGCAGCCGCATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALVSSRL*SSRILG
Trigger: GCCAAGAATGCGGCTGCTGCAGAGTCTGCTGGACAC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACGCATGGCGTGGCCGGTaGAGCATCCCGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHAWRGR*SIPHSS
Trigger: GGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGC...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGTTGGCCTTGAACACCTaGGCCTCGGTGCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWLALNT*ASVPSR
Trigger: CCTCGAGGGCACCGAGGCGCAGGTGTTCAAGGCCAA...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTGAGAGACCCGGGCTCTaGAGCACGGCCTCCGCATTG +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTERPGL*STASAL
Trigger: CAATGCGGAGGCCGTGCTGCAGAGCCCGGGTCTCTC...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GGTGAGCTGATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATAGCGACATGGGCGGCTaGCGCGGCAGGAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: GELISGQVQSFHVHPLVYSDMGG*RGRKSA
Trigger: TGCGCTTTTCCTGCCGCGGCAGCCGCCCATGTCGCT...ATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAATCAGCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTAGCGACATGGGCGGCTaGCGCGGCAGGAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTSDMGG*RGRKSA
Trigger: TGCGCTTTTCCTGCCGCGGCAGCCGCCCATGTCGCT...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGCCGCGCAAACTTCTTaGCCTCCAGCACGAAACCCT +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHAAQTS*PPARNP
Trigger: AGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGGCCGCGCAAACTTCTTaGCCTCCAGCACGAAACCCT +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLAAQTS*PPARNP
Trigger: AGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGC...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGCAGGCACCCAGTACCTaGAGAGGAAGACGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GHPCQVIAGQIHVCEVAQQAPST*RGRRSS
Trigger: ACTGCTACGTCTTCCTCTGCAGGTACTGGGTGCCTG...CTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCCTTCCTCGCCTTCTTTaGCCTCGGCCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCLPRLL*PRPSPP
Trigger: AGGAGGAGAAGGCCGAGGGCAAAGAAGGCGAGGAAG...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCAAGTCCTCCTCTGGCTaGTTCTCCTCTGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTKSSSG*FSSASA
Trigger: CGCTGAGGCAGAGGAGAAGCAGCCAGAGGAGGACTT...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCTGCTGCTGCGTCATaGGTACCACCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIPAAAS*VPPPAS
Trigger: GGAAGCTGGAGGTGGTACGCATGACGCAGCAGCAGG...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTCCTGCTGCTGCGTCATaGGTACCACCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILPAAAS*VPPPAS
Trigger: GGAAGCTGGAGGTGGTACGCATGACGCAGCAGCAGG...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGAACTTGGGGTTCTCCTaGTGCTGCGTCATGCGTACC +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVNLGFS*CCVMRT
Trigger: GGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTT...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGTGAGCTGATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGGGTGCAGAGGGCGCTaGCGTTGGTGCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: GELISGQVQSFHVHPLVYGCRGR*RWCGSG
Trigger: ACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCC...ATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAATCAGCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTTCTGGATGCACCGGGTaGAGAGGGCGCTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTSGCTG*RGRCRW
Trigger: CCAACGGCAGCGCCCTCTGCACCCGGTGCATCCAGA...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGAGGCGTGCTGCTCATTaGCCTTGCGGACCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWRRAAH*PCGPGA
Trigger: TGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCT...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGGCGTGCTGCTCATTaGCCTTGCGGACCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFARRAAH*PCGPGA
Trigger: TGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCT...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGAGGCGTGCTGCTCATTaGCCTTGCGGACCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPERRAAH*PCGPGA
Trigger: TGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCT...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACAGGCGTGCTGCTCATTaGCCTTGCGGACCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHRRAAH*PCGPGA
Trigger: TGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCT...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAAGGCGTGCTGCTCATTaGCCTTGCGGACCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRRRAAH*PCGPGA
Trigger: TGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCT...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRARVKAC*SLPLRT
Trigger: GGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCG...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGACGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERRVKAC*SLPLRT
Trigger: GGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCG...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTCGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGRVKAC*SLPLRT
Trigger: GGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCG...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGGGCACCTGCAGAGACTTTCAGGGACCAGCTCCAGGTTGTTGTTGGCAGCCATCGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: WAPAETFRDQLQVVVGSHRVKAC*SLPLRT
Trigger: GGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCG...ATGGCTGCCAACAACAACCTGGAGCTGGTCCCTGAAAGTCTCTGCAGGTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTCGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPRVKAC*SLPLRT
Trigger: GGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCG...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGACAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCAGGGGGCTTCACACGTaGACTCACACTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPRGLHT*THTVER
Trigger: TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTACTCCCAGCTGCAGCTaGAGCCACGGTAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPTPSCS*SHGSRR
Trigger: TCTCCTGCTACCGTGGCTGCAGCTGCAGCTGGGAGT...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000545457.6
ENST00000578558.5
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTACTCCCAGCTGCAGCTaGAGCCACGGTAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGTPSCS*SHGSRR
Trigger: TCTCCTGCTACCGTGGCTGCAGCTGCAGCTGGGAGT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000545457.6
ENST00000578558.5
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACGGGCCCACTCCCAGCTaGAGCTGCAGCCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHGPTPS*SCSHGS
Trigger: GCTACCGTGGCTGCAGCTGCAGCTGGGAGTGGGCCC...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000545457.6
ENST00000578558.5
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGGTGGTCAGGTTGTTGTaGCTCACAGACAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: AGWGGCTDTRAPVSGHCRVVRLL*LTDKCS
Trigger: GGAACACTTGTCTGTGAGCCACAACAACCTGACCAC...CCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCTCCCCATGAAGCGTaGTCAGGTTGTTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCAPHEA*SGCCGS
Trigger: TGAGCCACAACAACCTGACCACGCTTCATGGGGAGC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCAGGCTCCCCATGAAGCGTaGTCAGGTTGTTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: YAQGQLRDLVAAEVEAAQAPHEA*SGCCGS
Trigger: TGAGCCACAACAACCTGACCACGCTTCATGGGGAGC...CTGCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCGCTCCCCATGAAGCGTaGTCAGGTTGTTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPAPHEA*SGCCGS
Trigger: TGAGCCACAACAACCTGACCACGCTTCATGGGGAGC...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGGCAGCGATGGCAGGCTaGACAGCTCCCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWAAMAG*TAPHEA
Trigger: CGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGC...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGGCAGCGATGGCAGGCTaGACAGCTCCCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQAAMAG*TAPHEA
Trigger: CGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGC...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCACCAGCATGTTCTTaGCGTTCTCCAGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGAPACS*RSPAPA
Trigger: CGCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGC...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGCACCAGCATGTTCTTaGCGTTCTCCAGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPAPACS*RSPAPA
Trigger: CGCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGC...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCGCACCAGCATGTTCTTaGCGTTCTCCAGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVAPACS*RSPAPA
Trigger: CGCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGC...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CTTGCAGAAGGCGCTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTGCTGCTCATTAGAGCTGGTTGGGGATaGTGTCGATGCTGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LAEGAPGVEAAGKGVLLIRAGWG*CRCCCG
Trigger: GCCACAACAGCATCGACACCATCCCCAACCAGCTCT...AATGAGCAGCACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGCCTTCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGAGGTTGATGAAGAGCTaGTTGGGGATGGTGTCGATG +
Preference number: 4 (lower is better)
Translates to: AGWGGCTDTRAPVSGHCRRLMKS*LGMVSM
Trigger: CATCGACACCATCCCCAACCAGCTCTTCATCAACCT...CCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp ACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGACAGGGCCGTCATCGCTaGGAGCTGCCGGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TRWFLFRTSFLSFGHLQRQGRHR*ELPELC
Trigger: GCACAGCTCCGGCAGCTCCCAGCGATGACGGCCCTG...TCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: ASGRVTRWFLFRTSFLSFVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...AAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: DGFWEGHQVVLVQDKFPQDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...CTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GCTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTCAAAGTCCAGCTTGTTaGAATTCAGGTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAHCPCGPGAAGAAAHVPQSPAC*NSGTAS
Trigger: AGAAGCTGTACCTGAATTCCAACAAGCTGGACTTTG...AGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGCCGTCAGGAAATGGATaGCTTCTGGGAGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLPSGNG*LLGGSP
Trigger: TGGTGACCCTCCCAGAAGCCATCCATTTCCTGACGG...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGAATCTCCGTCAGGAAATaGATGGCTTCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: QAGEGVQTLGHPCQVIAGISVRK*MASGRV
Trigger: GACCCTCCCAGAAGCCATCCATTTCCTGACGGAGAT...TCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGTTGGCCTGGTCATCCTaGGCTGAATCCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALLAWSS*AESLRL
Trigger: GAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAA...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTTGGCCTGGTCATCCTaGGCTGAATCCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHLAWSS*AESLRL
Trigger: GAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAA...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCAGCACCTGCTTGGCCTaGTCATCCTGGGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCSTCLA*SSWAES
Trigger: GGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCT...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGGGCTTCTCCAGGCCCTaGTCCCAACGCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: VTRWFLFRTSFLSFGHLQGFSRP*SQRRTF
Trigger: GAAGGTGCGGCGTTGGGACCAGGGCCTGGAGAAGCC...CTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTCAGTCCGGGCAGCTaGCCCACGTCCTCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTVSPGS*PTSSVK
Trigger: CTTCACGGAGGACGTGGGCCAGCTGCCCGGACTGAC...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCCTTTCTTGTCGAGTGTaGCCTCCCCGCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: GRVYRHSGTRVRSLQDRSLSCRV*PPRQSS
Trigger: ACTGGATTGGCGGGGAGGCCACACTCGACAAGAAAG...GGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCCTTTCTTGTCGAGTGTaGCCTCCCCGCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPLSCRV*PPRQSS
Trigger: ACTGGATTGGCGGGGAGGCCACACTCGACAAGAAAG...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGCTTTCTTGTCGAGTGTaGCCTCCCCGCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: GAAAHVPWTACAGYIPGRLSCRV*PPRQSS
Trigger: ACTGGATTGGCGGGGAGGCCACACTCGACAAGAAAG...CCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCCAAAGAGCCTGGCCTTaGTGGTGCTGCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCQRAWP*WCCSVW
Trigger: CCACACTGAGCAGCACCACCAAGGCCAGGCTCTTTG...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGCAAAGAGCCTGGCCTTaGTGGTGCTGCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALQRAWP*WCCSVW
Trigger: CCACACTGAGCAGCACCACCAAGGCCAGGCTCTTTG...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGACCCTCCCAAAGAGCCTGGCCTTaGTGGTGCTGCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RVRSLQDRSTSARLLRPSQRAWP*WCCSVW
Trigger: CCACACTGAGCAGCACCACCAAGGCCAGGCTCTTTG...GGAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTAACTCTGGGAGCTCCTaGCCCTGCACCAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILNSGSS*PCTSSV
Trigger: CACACTGCTGGTGCAGGGCCAGGAGCTCCCAGAGTT...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTAACTCTGGGAGCTCCTaGCCCTGCACCAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPNSGSS*PCTSSV
Trigger: CACACTGCTGGTGCAGGGCCAGGAGCTCCCAGAGTT...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAACTCTGGGAGCTCCTaGCCCTGCACCAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGNSGSS*PCTSSV
Trigger: CACACTGCTGGTGCAGGGCCAGGAGCTCCCAGAGTT...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCCCACCTTGTACAGCTTaGGCTGCGGCGGCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGPPCTA*AAAARS
Trigger: ACTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGG...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGACCACCTTGTACAGCTTaGGCTGCGGCGGCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGPPCTA*AAAARS
Trigger: ACTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGG...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATCAGCAGCCGCATTCTTaGCATCAGCTCCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHQQPHS*HQLHLG
Trigger: CCCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTG...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGAAGTACACGATGCACTaGAAGTCCTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRKYTMH*KSSSGC
Trigger: GCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTT...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCCAGGGCCTTGCAGAAGGCGCTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTGAACTTCCTCTTGAAATaGGACAGGAACTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GQGLAEGAPGVEAAGKGVNFLLK*DRNLGF
Trigger: GAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTT...CACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGCCTTCTGCAAGGCCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCGAGTCGGTGTTGATCTaGATGCACCGGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPESVLI*MHRVQR
Trigger: CCTCTGCACCCGGTGCATCCAGATCAACACCGACTC...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp TCCACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGGAGTCGGTGTTGATCTaGATGCACCGGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: STCTHWSMHRDSSVIWLLESVLI*MHRVQR
Trigger: CCTCTGCACCCGGTGCATCCAGATCAACACCGACTC...CAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCGAGTCGGTGTTGATCTaGATGCACCGGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTESVLI*MHRVQR
Trigger: CCTCTGCACCCGGTGCATCCAGATCAACACCGACTC...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGAGTCGGTGTTGATCTaGATGCACCGGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALESVLI*MHRVQR
Trigger: CCTCTGCACCCGGTGCATCCAGATCAACACCGACTC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGGAGTCGGTGTTGATCTaGATGCACCGGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TCTHWSMHRDSSVIWLLLESVLI*MHRVQR
Trigger: CCTCTGCACCCGGTGCATCCAGATCAACACCGACTC...CAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGCATACACGATGCCCTaGTTGTCCTCACTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQAYTMP*LSSLSK
Trigger: CTTTGAGAGTGAGGACAACCAGGGCATCGTGTATGC...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATAGGAGGTGTCAAACATaGTGTTCAGGATGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: DQAQPARPLMFLGPHVLDRRCQT*CSGCLL
Trigger: CAGAAGACATCCTGAACACCATGTTTGACACCTCCT...ATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGAGTAGCCCTTCTCGTTaGAGCACCGGAAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLSSPSR*STGRDV
Trigger: CACGTCTCTTCCGGTGCTCCAACGAGAAGGGCTACT...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTAGCTTGATCTCCACCTaGCTAGTCTGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTSLIST*LVWVPT
Trigger: GGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCT...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGTGCTGGATATATACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRCWIYT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTATATATCCAGCA...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGTGCTGGATATATACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGCWIYT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTATATATCCAGCA...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGTTGGACCGCATGTGCTaGATATATACCTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGLDRMC*IYTWQA
Trigger: GGCCTGCCAGGTATATATCCAGCACATGCGGTCCAA...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATAT +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRAAHVP*TACAGY
Trigger: ATATCCAGCACATGCGGTCCAAGGAACATGAGCGGC...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVILWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGGGCTACTGGGGACTGTaGCACTGGACGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWGYWGL*HWTWLE
Trigger: CTCCAGCCACGTCCAGTGCCACAGTCCCCAGTAGCC...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: AAGAAAHVPWTACAGYIPQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...AGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGTAGCCGCCAGGCACTaGGCGGAGGCCTCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQVAARH*AEASEV
Trigger: GACCTCCGAGGCCTCCGCCCAGTGCCTGGCGGCTAC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579294.5
ENST00000638812.1
CDS-3UTR TCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCTGGACAGCTCCCCATaGAGCGTGGTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRLDSSP*SVVRLL
Trigger: CAACAACCTGACCACGCTTCATGGGGAGCTGTCCAG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCCTGGACAGCTCCCCATaGAGCGTGGTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGLDSSP*SVVRLL
Trigger: CAACAACCTGACCACGCTTCATGGGGAGCTGTCCAG...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGACTGGACAGCTCCCCATaGAGCGTGGTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERLDSSP*SVVRLL
Trigger: CAACAACCTGACCACGCTTCATGGGGAGCTGTCCAG...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTCCAGGCGGTTCTCGCTaGGGTCCAGGTATAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILPGGSR*GPGIVG
Trigger: ACCTACTATACCTGGACCTCAGCGAGAACCGCCTGG...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTCCAGGCGGTTCTCGCTaGGGTCCAGGTATAGTAGGT +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGPGGSR*GPGIVG
Trigger: ACCTACTATACCTGGACCTCAGCGAGAACCGCCTGG...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAAGGFH*ARASAG
Trigger: ACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGC...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000638207.2
ENST00000639036.1
CDS-3UTR TCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCCTGAGGGCAGTGAGGTaGGCTGATTTCGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVLRAVR*ADFGTG
Trigger: ACCTGTCCCGAAATCAGCTCACCTCACTGCCCTCAG...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCCTGAGGGCAGTGAGGTaGGCTGATTTCGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGLRAVR*ADFGTG
Trigger: ACCTGTCCCGAAATCAGCTCACCTCACTGCCCTCAG...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGACTCTTCCAGGTTGGTaGGCTTGCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TCTHWSMHRDSSVIWLLLTLPGW*ACQCLR
Trigger: CCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGT...CAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAACTCTTCCAGGTTGGTaGGCTTGCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AMNSSRLVSLPMPEGSPSTLPGW*ACQCLR
Trigger: CCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGT...TGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR TCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGACTCTTCCAGGTTGGTaGGCTTGCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLTLPGW*ACQCLR
Trigger: CCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGT...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACGGGCTTGGGCGGCATaGCCAGGTTGGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRAWAA*PGWGSP
Trigger: GGGAGAACCCCAACCTGGTCATGCCGCCCAAGCCCG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCTCCTGGGCAACATCTaGCATGCCCTTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGLLGNI*HALQHL
Trigger: CAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAG...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGGCCCACGTCCTCCGTaGAGAACTCGGAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRAGPRPP*RTRSSQ
Trigger: TTGACTACTCCGAGTTCTTCACGGAGGACGTGGGCC...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCAGTAGATCTCCCAGTTaGGGGAGCCGCTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPSRSPS*GSRCHP
Trigger: TGGATGACAGCGGCTCCCTCAACTGGGAGATCTACT...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGGTAGTTGCGCAAGTTaGCAGCGTGGATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERGSCAS*QRGWQS
Trigger: GCTCTGCCATCCACGCTGTCAACTTGCGCAACTACC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCGGTAGTTGCGCAAGTTaGCAGCGTGGATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGGSCAS*QRGWQS
Trigger: GCTCTGCCATCCACGCTGTCAACTTGCGCAACTACC...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCGGTAGTTGCGCAAGTTaGCAGCGTGGATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASGSCAS*QRGWQS
Trigger: GCTCTGCCATCCACGCTGTCAACTTGCGCAACTACC...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGGTAGTTGCGCAAGTTaGCAGCGTGGATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPGSCAS*QRGWQS
Trigger: GCTCTGCCATCCACGCTGTCAACTTGCGCAACTACC...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTCCTGCACCAGCAGTGTaGTCTCAGCCTTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGPAPAV*SQPSLS
Trigger: GGAAAGGGAAGGCTGAGATCACACTGCTGGTGCAGG...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTTGCGGCCGAGCCAGATaGACACGTCGGACCAACAGT +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFACGRAR*TRRTNS
Trigger: ACTGTTGGTCCGACGTGTTCATCTGGCTCGGCCGCA...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACATCCCGCACAGCTCCTaGCCCAGCTTGAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHIPHSS*PSLRAA
Trigger: TGCCGCCCTCAAGCTGGGTCAGGAGCTGTGCGGGAT...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGGGCTGGAGTCGGTGTTaGTCTGGATGCACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMGWSRC*SGCTGC
Trigger: GCACCCGGTGCATCCAGATCAACACCGACTCCAGCC...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp CACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGGGCTGGAGTCGGTGTTaGTCTGGATGCACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: HQVVLVQDKFPQLWAPAEGWSRC*SGCTGC
Trigger: GCACCCGGTGCATCCAGATCAACACCGACTCCAGCC...CTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCAGCAGAACTCGGAGTTaGGGAGGCTGGAGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCSRTRS*GGWSRC
Trigger: ACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCT...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTAGCAGAACTCGGAGTTaGGGAGGCTGGAGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPSRTRS*GGWSRC
Trigger: ACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCT...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR TCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGATTTCCCAGACCCCTaGGGGCACCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPEDFPDP*GHLSGS
Trigger: TGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATC...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAAGTCCTCCTCGGAAGGATGTCAAGGTaGAGCACAGAGCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: IGGFTALPEVHDALEVLLGRMSR*STEPLL
Trigger: GAGCAGGGGCTCTGTGCTTCACCTTGACATCCTTCC...GAGGAGGACTTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGAAGTGTTCCAGCTTCTaGAGGGCGGCCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWKCSSF*RAASSS
Trigger: CGAGGAGCTGGCCGCCCTGCAGAAGCTGGAACACTT...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTTTGAGCACGAGCGTCTaGAGGTGCACCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: ASGRVTRWFLFRTSFLSFLSTSV*RCTRRR
Trigger: GCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAA...AAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCTGCCGGAGCTGTGCATaGAGCAGGGGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: LAAMNSSRLVSLPMPEGSCRSCA*SRGFPL
Trigger: CAATGGAAACCCCCTGCTGCATGCACAGCTCCGGCA...GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCATGCCGGAGCTGTGCATaGAGCAGGGGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRACRSCA*SRGFPL
Trigger: CAATGGAAACCCCCTGCTGCATGCACAGCTCCGGCA...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTTGCCGGAGCTGTGCATaGAGCAGGGGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPCRSCA*SRGFPL
Trigger: CAATGGAAACCCCCTGCTGCATGCACAGCTCCGGCA...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGAGCTGCCGGAGCTGTaGATGCAGCAGGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTELPEL*MQQGVS
Trigger: GGAAACCCCCTGCTGCATGCACAGCTCCGGCAGCTC...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQWVLRR*RVCRAV
Trigger: GACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGCTGGTGGGCAGGTTaGTCTGGGTGCGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGWWAG*SGCAGC
Trigger: GCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGGGCACCTGCAGAGACTTTCAGGGACCAGCTCCAGGTTGTTGTTGGCAGCCATGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: WAPAETFRDQLQVVVGSHGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...ATGGCTGCCAACAACAACCTGGAGCTGGTCCCTGAAAGTCTCTGCAGGTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATCCCGTGTCAGGTCATTaGAGGACAGATCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHPVSGH*RTDPRL
Trigger: CAGACGTGGATCTGTCCTGCAATGACCTGACACGGG...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCGGCCAGAAGTCTTCAGGCACGTGCTTCTTGATCTCAGAGGGCTCCCCACCCTTCAGAGTTTCCACGTaGACCCACTGGTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: GGQKSSGTCFLISEGSPPFRVST*THWSMH
Trigger: GTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAA...GGGTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTTCTGGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGTTCAGAGTTTCCACGTaGACCCACTGGTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRFRVST*THWSMH
Trigger: GTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAA...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCAGTCAGCTTGCTCAGCTTaGAAATGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: YAQGQLRDLVAAEVEAAQSACSA*KWLRAV
Trigger: CACTGCCCTCAGCCATTTGCAAGCTGAGCAAGCTGA...CTGCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCTCAGCTTTGGGCACCTaGAGAGACTTTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPSALGT*RDFQGP
Trigger: TGGTCCCTGAAAGTCTCTGCAGGTGCCCAAAGCTGA...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGTCAGCTTTGGGCACCTaGAGAGACTTTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLSALGT*RDFQGP
Trigger: TGGTCCCTGAAAGTCTCTGCAGGTGCCCAAAGCTGA...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACTCAGCGGCACGGTCTaGGGGCTTGGGCGGCATGAC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLSGTV*GLGRHD
Trigger: GTCATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTCCTGGGCTGAATCCTTaGGCCTCCGCAGTCGCATCT +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAPGLNP*ASAVAS
Trigger: AGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGG...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAATGCCCTTCAGCACCTaGTTGGCCTGGTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERMPFST*LAWSSW
Trigger: CCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCAT...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCATGCCCTTCAGCACCTaGTTGGCCTGGTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCMPFST*LAWSSW
Trigger: CCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCAT...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTATGCCCTTCAGCACCTaGTTGGCCTGGTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILMPFST*LAWSSW
Trigger: CCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCAT...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCGGGCAACATCTGACATaGCCTTCAGCACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTGQHLT*PSAPAW
Trigger: CCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCC...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGTCTGCGCTCTCCTCCTaGTTTTTGTTCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGSALSS*FLFFSW
Trigger: CCAGGAGAAGAACAAAAAGCAGGAGGAGAGCGCAGA...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCATCTCCTCCCGGACAGTaGGGCACTCAGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: GHQVVLVQDKFPQLWAPASPPGQ*GTQHPG
Trigger: ACCTGGGTGCTGAGTGCCGCACTGTCCGGGAGGAGA...TGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACGGGCTCCCCACCCAGTaGCTCCCAGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHGLPTQ*LPELWE
Trigger: CTCCCAGAGTTCTGGGAGGCACTGGGTGGGGAGCCC...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGGGGCTCCCCACCCAGTaGCTCCCAGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRGLPTQ*LPELWE
Trigger: CTCCCAGAGTTCTGGGAGGCACTGGGTGGGGAGCCC...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGAAGTCTTCAGGCACGTaGTTCTTGATCTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGKSSGT*FLISEG
Trigger: GCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTT...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGTTGTACAGCTTGGGCTaGGGCGGCCAGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLLYSLG*GGQKSS
Trigger: TGAAGACTTCTGGCCGCCGCAGCCCAAGCTGTACAA...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTTGTACAGCTTGGGCTaGGGCGGCCAGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCLYSLG*GGQKSS
Trigger: TGAAGACTTCTGGCCGCCGCAGCCCAAGCTGTACAA...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTTCCACCTTGGGACGCTaGTTATGTTCCACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTSTLGR*LCSTES
Trigger: GCTCTCCGTGGAACATAAGCAGCGTCCCAAGGTGGA...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCGTGTCCAGCAGACTCTaGAGCAGCCGCATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVVSSRL*SSRILG
Trigger: GCCAAGAATGCGGCTGCTGCAGAGTCTGCTGGACAC...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTGTCCAGCAGACTCTaGAGCAGCCGCATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERVSSRL*SSRILG
Trigger: GCCAAGAATGCGGCTGCTGCAGAGTCTGCTGGACAC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp CACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGTGTCCAGCAGACTCTaGAGCAGCCGCATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: HPLVYAQGQLRDLVAAEVVSSRL*SSRILG
Trigger: GCCAAGAATGCGGCTGCTGCAGAGTCTGCTGGACAC...AACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCATGGCGTGGCCGGTaGAGCATCCCGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAWRGR*SIPHSS
Trigger: GGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCACTCCTCCATCAGCTaGTCCGCCTCGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRHSSIS*SASASD
Trigger: GTCGCTGGCCGAGGCGGAGCAGCTGATGGAGGAGTG...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TACACGATGCCCTGGTTGTCCTCACTCTCAAAGGGAACCTTGAGGATGAAGCAGCACTCCTCCATCAGCTaGTCCGCCTCGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: YTMPWLSSLSKGTLRMKQHSSIS*SASASD
Trigger: GTCGCTGGCCGAGGCGGAGCAGCTGATGGAGGAGTG...CTGCTTCATCCTCAAGGTTCCCTTTGAGAGTGAGGACAACCAGGGCATCGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GTTGTCAAACACCTGCAGGAACTCCTCGCTCTCATCGCCCATCTCCTCCCGGACGCACGAAACCCTCCATaGCGTCTAGGTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: VVKHLQELLALIAHLLPDARNPP*RLGLRS
Trigger: GGAACGAAGACCTAGACGGCATGGAGGGTTTCGTGC...GTCCGGGAGGAGATGGGCGATGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCCGCGCAAACTTCTTaGCCTCCAGCACGAAACCCT +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGAAQTS*PPARNP
Trigger: AGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGC...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCGCCGCGCAAACTTCTTaGCCTCCAGCACGAAACCCT +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGAAQTS*PPARNP
Trigger: AGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGC...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCAGGCACCCAGTACCTaGAGAGGAAGACGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAQAPST*RGRRSS
Trigger: ACTGCTACGTCTTCCTCTGCAGGTACTGGGTGCCTG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGACTTCCTCGCCTTCTTTaGCCTCGGCCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERLPRLL*PRPSPP
Trigger: AGGAGGAGAAGGCCGAGGGCAAAGAAGGCGAGGAAG...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCCTTCCTCGCCTTCTTTaGCCTCGGCCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGLPRLL*PRPSPP
Trigger: AGGAGGAGAAGGCCGAGGGCAAAGAAGGCGAGGAAG...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCCTCTGCCTCAGCGGTTaGTTCCTCGCCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASLCLSG*FLAFFA
Trigger: GGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAG...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCTCTGCCTCAGCGGTTaGTTCCTCGCCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVILCLSG*FLAFFA
Trigger: GGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAG...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAAGTCCTCCTCTGGCTaGTTCTCCTCTGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGKSSSG*FSSASA
Trigger: CGCTGAGGCAGAGGAGAAGCAGCCAGAGGAGGACTT...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTAAGTCCTCCTCTGGCTaGTTCTCCTCTGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGKSSSG*FSSASA
Trigger: CGCTGAGGCAGAGGAGAAGCAGCCAGAGGAGGACTT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGGCCAGAAGTACACGATaGACTGGAAGTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GAAAHVPWTACAGYIPGRARSTR*TGSPPL
Trigger: CAGAGGAGGACTTCCAGTGCATCGTGTACTTCTGGC...CCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTGAGGCTTCACGGCCCTaGCAGAAGTACACGATGCAC +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILEASRP*QKYTMH
Trigger: GTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTC...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGAGGCTTCACGGCCCTaGCAGAAGTACACGATGCAC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVREASRP*QKYTMH
Trigger: GTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCTGCTGCTGCGTCATaGGTACCACCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRPAAAS*VPPPAS
Trigger: GGAAGCTGGAGGTGGTACGCATGACGCAGCAGCAGG...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGGGTTCTCCTGCTGCTaGGTCATGCGTACCACCTCC +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFGFSCC*VMRTTS
Trigger: GGAGGTGGTACGCATGACGCAGCAGCAGGAGAACCC...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGGGTTCTCCTGCTGCTaGGTCATGCGTACCACCTCC +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVGFSCC*VMRTTS
Trigger: GGAGGTGGTACGCATGACGCAGCAGCAGGAGAACCC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTGGGGTTCTCCTGCTaGTGCGTCATGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGLGFSC*CVMRTT
Trigger: GGTGGTACGCATGACGCAGCAGCAGGAGAACCCCAA...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGGTTCAGGATGTCTTCTaGCAACTTGGCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGVQDVF*QLGFVR
Trigger: CCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAAC...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGCTTCTGTGCCCCAATaGCCACCCAGAAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLASVPQ*PPRRSS
Trigger: AGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGC...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp CAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGCTTCTGTGCCCCAATaGCCACCCAGAAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: QTLGHPCQVIAGQIHVCEASVPQ*PPRRSS
Trigger: AGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGC...CTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATTCCTTGGACCGCATGTaGTGGATATATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RRSRRGRSCSLDRMCWIYSLDRM*WIYTWQ
Trigger: CTGCCAGGTATATATCCAGCACATGCGGTCCAAGGA...ATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCTGCTCATTGCCCTTaGGGACCAGGCGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAAHCP*GPGAAG
Trigger: GCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACCGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHRVKAC*SLPLRT
Trigger: GGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCG...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPEQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRAGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTAGGGGGCTTCACACGTaGACTCACACTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTRGLHT*THTVER
Trigger: TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGAAGCACAGAGCCCCTaGTCACCACCTTCTATGGCT +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTEAQSP*SPPSMA
Trigger: AGCCATAGAAGGTGGTGAGCAGGGGCTCTGTGCTTC...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTGCAGCGATGGCAGGCTaGACAGCTCCCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFAAMAG*TAPHEA
Trigger: CGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGC...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGATGGCGCGCAGCGATaGCAGGCTGGACAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQDGAQR*QAGQLP
Trigger: GGGGAGCTGTCCAGCCTGCCATCGCTGCGCGCCATC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GCAGAACTCGGAGTTGAGGAGGCTGGAGTCGGTGTTGATCTGGATGCACCGGGTAATTCTTCAGACTGTTaGCTCGGGCCACGATGGCGC +
Preference number: 4 (lower is better)
Translates to: AELGVEEAGVGVDLDAPGNSSDC*LGPRWR
Trigger: GCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATT...ACCCGGTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCAGAGCTGGTTGGGGATaGTGTCGATGCTGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTRAGWG*CRCCCG
Trigger: GCCACAACAGCATCGACACCATCCCCAACCAGCTCT...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACAGGGCCGTCATCGCTaGGAGCTGCCGGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQQGRHR*ELPELC
Trigger: GCACAGCTCCGGCAGCTCCCAGCGATGACGGCCCTG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RLLLAAMNSSRLVSLPMPLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGTGGGCAGGTTGCTCTaGGTGCGCTGGGTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQVGRLL*VRWVLR
Trigger: GCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCAC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGTCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VTRWFLFRTSFLSFGHLQSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...CTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: QTLGHPCQVIAGQIHVCEGRVTR*FLFRTS
Trigger: ACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCC...CTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVGRVTR*FLFRTS
Trigger: ACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCCGTCAGGAAATGGATaGCTTCTGGGAGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAPSGNG*LLGGSP
Trigger: TGGTGACCCTCCCAGAAGCCATCCATTTCCTGACGG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCCCGTCAGGAAATGGATaGCTTCTGGGAGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTPSGNG*LLGGSP
Trigger: TGGTGACCCTCCCAGAAGCCATCCATTTCCTGACGG...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGATCTCCGTCAGGAAATaGATGGCTTCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVISVRK*MASGRV
Trigger: GACCCTCCCAGAAGCCATCCATTTCCTGACGGAGAT...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTGGCCTGGTCATCCTaGGCTGAATCCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGLAWSS*AESLRL
Trigger: GAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAA...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTAGCACCTGCTTGGCCTaGTCATCCTGGGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGSTCLA*SSWAES
Trigger: GGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCT...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAAGCACCTGCTTGGCCTaGTCATCCTGGGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGSTCLA*SSWAES
Trigger: GGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCT...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACGGCTTCTCCAGGCCCTaGTCCCAACGCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHGFSRP*SQRRTF
Trigger: GAAGGTGCGGCGTTGGGACCAGGGCCTGGAGAAGCC...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCTCTCTATCTGCCAGATaGTCAGTCCGGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGSLSAR*SVRAAG
Trigger: GCCAGCTGCCCGGACTGACCATCTGGCAGATAGAGA...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTCTCTATCTGCCAGATaGTCAGTCCGGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILSLSAR*SVRAAG
Trigger: GCCAGCTGCCCGGACTGACCATCTGGCAGATAGAGA...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCGCAAGTTGACAGCGTaGATGGCAGAGCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVRKLTA*MAEQAF
Trigger: GAAAGCTTGCTCTGCCATCCACGCTGTCAACTTGCG...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCCAAAGAGCCTGGCCTTaGTGGTGCTGCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCQRAWP*WCCSVW
Trigger: CCACACTGAGCAGCACCACCAAGGCCAGGCTCTTTG...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp CAGCTTGATCTCCACCTGGCTAGTCTGGGTCCCCACCCACATGTAGACCTCTTGCAAAGAGCCTGGCCTTaGTGGTGCTGCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: QLDLHLASLGPHPHVDLLQRAWP*WCCSVW
Trigger: CCACACTGAGCAGCACCACCAAGGCCAGGCTCTTTG...CAAGAGGTCTACATGTGGGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTTCTCTGCAAAGAGCCTaGCCTTGGTGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGASLQRA*PWWCCS
Trigger: TGAGCAGCACCACCAAGGCCAGGCTCTTTGCAGAGA...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCATCAGCTCCACCTTaGGACGCTGCTTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVASAPP*DAAYVP
Trigger: TGGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGCATCAGCTCCACCTTaGGACGCTGCTTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: QTLGHPCQVIAGQIHVCEASAPP*DAAYVP
Trigger: TGGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGC...CTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTCAGCAGCCGCATTCTTaGCATCAGCTCCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILQQPHS*HQLHLG
Trigger: CCCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTG...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCCAGCAGCCGCATTCTTaGCATCAGCTCCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASQQPHS*HQLHLG
Trigger: CCCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTG...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCCAGCAGCCGCATTCTTaGCATCAGCTCCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCQQPHS*HQLHLG
Trigger: CCCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTG...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGACCGTGGCATGGCGTaGCCGGTGCAGCATCCCGCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQDRGMA*PVQHPA
Trigger: TGCGGGATGCTGCACCGGCCACGCCATGCCACGGTC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACGGCTGACCGTGGCATaGCGTGGCCGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRLTVA*RGRCSI
Trigger: GATGCTGCACCGGCCACGCCATGCCACGGTCAGCCG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCAGGTCAGCCTTCATCTaGTCTTTCTTCTCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPRSAFI*SFFSAS
Trigger: CGACGCCGAGAAGAAAGACCAGATGAAGGCTGACCT...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GCAGTCAGCCTCGTAGAACTTGCCGTGGAAGGCTTCCTCCACCAGCACAGGCACAGGTCAGCCTTCATCTaGTCTTTCTTCTCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: AVSLVELAVEGFLHQHRHRSAFI*SFFSAS
Trigger: CGACGCCGAGAAGAAAGACCAGATGAAGGCTGACCT...GTGCCTGTGCTGGTGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTAGGTCAGCCTTCATCTaGTCTTTCTTCTCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAARSAFI*SFFSAS
Trigger: CGACGCCGAGAAGAAAGACCAGATGAAGGCTGACCT...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGAAGTACACGATGCACTaGAAGTCCTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLKYTMH*KSSSGC
Trigger: GCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTT...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCAAGTACACGATGCACTaGAAGTCCTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPKYTMH*KSSSGC
Trigger: GCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTT...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGAATGGGACAGGAACTTaGGGTTCTCCTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALNGTGT*GSPAAA
Trigger: CGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATT...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GTTGTCAAACACCTGCAGGAACTCCTCGCTCTCATCGCCCATCTCCTCCCGGACAATGGGACAGGAACTTaGGGTTCTCCTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: VVKHLQELLALIAHLLPDNGTGT*GSPAAA
Trigger: CGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATT...GTCCGGGAGGAGATGGGCGATGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGTTCCTCTTGCCCCGGTaGATGATGAACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRFLLPR*MMNFLL
Trigger: CAAGAGGAAGTTCATCATCCACCGGGGCAAGAGGAA...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGGATCTGGTAGAGGCTaGGCTGTTGGGCGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: GHQVVLVQDKFPQLWAPAGSGRG*AVGRPG
Trigger: TCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCC...TGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCGAGTCGGTGTTGATCTaGATGCACCGGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVESVLI*MHRVQR
Trigger: CCTCTGCACCCGGTGCATCCAGATCAACACCGACTC...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGGCATACACGATGCCCTaGTTGTCCTCACTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRAYTMP*LSSLSK
Trigger: CTTTGAGAGTGAGGACAACCAGGGCATCGTGTATGC...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTAGTAGCCCTTCTCGTTaGAGCACCGGAAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTSSPSR*STGRDV
Trigger: CACGTCTCTTCCGGTGCTCCAACGAGAAGGGCTACT...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCAGTAGCCCTTCTCGTTaGAGCACCGGAAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCSSPSR*STGRDV
Trigger: CACGTCTCTTCCGGTGCTCCAACGAGAAGGGCTACT...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGAGCTTGATCTCCACCTaGCTAGTCTGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRSLIST*LVWVPT
Trigger: GGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCT...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAAGCTTGATCTCCACCTaGCTAGTCTGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGSLIST*LVWVPT
Trigger: GGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCT...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATAT +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAAAHVP*TACAGY
Trigger: ATATCCAGCACATGCGGTCCAAGGAACATGAGCGGC...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: GWLLGGSPGGSCSGQVSSGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...TGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTGGCACTGGACGTGGCTaGAGCAGGTGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFGTGRG*SRWCHL
Trigger: CAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TACACGATGCCCTGGTTGTCCTCACTCTCAAAGGGAACCTTGAGGATGAAGCAGGGCTCCTCCAGCCCATaGGAGCCTTTGGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: YTMPWLSSLSKGTLRMKQGSSSP*EPLGSH
Trigger: GTGGCTCCCCAAAGGCTCCCATGGGCTGGAGGAGCC...CTGCTTCATCCTCAAGGTTCCCTTTGAGAGTGAGGACAACCAGGGCATCGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTTCCACCCAGATTACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGSTQIT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTAATCTGGGTGGA...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS-3UTR CCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTTGCTGGATATATACCTaGCAAGGGGACAGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCCWIYT*QGDSEP
Trigger: AGGCTCGCTGTCCCCTTGCCAGGTATATATCCAGCA...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS-3UTR CCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTGCCGCTCATGTTCCTTaGGTCCAGAGAGGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGAAHVP*VQRGPL
Trigger: AAGGGGACCTCTCTGGACCCAAGGAACATGAGCGGC...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578558.5
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGGACACGCAGGGCCTaGAGCCGAGCGGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGTRRA*SRAGQE
Trigger: TTCCTGTCCCGCTCGGCTCCAGGCCCTGCGTGTCCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579294.5
ENST00000638812.1
3UTR CAA 72 bp AGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RVYRHSGTRVRS*QDRSTSARLLR
Trigger: TCTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR TCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGCTGGACAGCTCCCCATaGAGCGTGGTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWLDSSP*SVVRLL
Trigger: CAACAACCTGACCACGCTTCATGGGGAGCTGTCCAG...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCCTGGACAGCTCCCCATaGAGCGTGGTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGLDSSP*SVVRLL
Trigger: CAACAACCTGACCACGCTTCATGGGGAGCTGTCCAG...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFAGGFH*ARASAG
Trigger: ACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGC...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR TCA 90 bp CCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGACGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PGGSCSGQVSSALGTCRDAGGFH*ARASAG
Trigger: ACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGC...GTCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILGSEVS*FRDRFR
Trigger: TCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCC...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGGSEVS*FRDRFR
Trigger: TCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCC...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIGSEVS*FRDRFR
Trigger: TCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCC...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRAGSEVS*FRDRFR
Trigger: TCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCC...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVGSEVS*FRDRFR
Trigger: TCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCC...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGCTGAGGGCAGTGAGGTaGGCTGATTTCGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQLRAVR*ADFGTG
Trigger: ACCTGTCCCGAAATCAGCTCACCTCACTGCCCTCAG...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp CACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGGAGCTTGCCAATGCCTaGGGGCAGCCCGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: HQVVLVQDKFPQLWAPAEELANA*GQPVKV
Trigger: GACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTC...CTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTACTCTTCCAGGTTGGTaGGCTTGCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILTLPGW*ACQCLR
Trigger: CCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGT...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAAGTCCACTCTTCCAGGTTGGTaGGCTTGCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NSSRLVSLPMPEGSPSKSTLPGW*ACQCLR
Trigger: CCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGT...GGACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR TCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACCTGGTCATCCTGGGCTaGATCCTTGCGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHLVILG*ILAPPQ
Trigger: CTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAG...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGGCCCACGTCCTCCGTaGAGAACTCGGAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVGPRPP*RTRSSQ
Trigger: TTGACTACTCCGAGTTCTTCACGGAGGACGTGGGCC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCCCACGTCCTCCGTaGAGAACTCGGAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPEGPRPP*RTRSSQ
Trigger: TTGACTACTCCGAGTTCTTCACGGAGGACGTGGGCC...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGGGCCCACGTCCTCCGTaGAGAACTCGGAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWGPRPP*RTRSSQ
Trigger: TTGACTACTCCGAGTTCTTCACGGAGGACGTGGGCC...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GATCTCCACCTGGCTAGTCTGGGTCCCCACCCACATGTAGACCTCTTGGCCATTAGTAGATCTCCCAGTTaGGGGAGCCGCTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: DLHLASLGPHPHVDLLAISRSPS*GSRCHP
Trigger: TGGATGACAGCGGCTCCCTCAACTGGGAGATCTACT...AATGGCCAAGAGGTCTACATGTGGGTGGGGACCCAGACTAGCCAGGTGGAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTAGTAGATCTCCCAGTTaGGGGAGCCGCTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGSRSPS*GSRCHP
Trigger: TGGATGACAGCGGCTCCCTCAACTGGGAGATCTACT...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGGTAGTTGCGCAAGTTaGCAGCGTGGATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVGSCAS*QRGWQS
Trigger: GCTCTGCCATCCACGCTGTCAACTTGCGCAACTACC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCGGTAGTTGCGCAAGTTaGCAGCGTGGATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGGSCAS*QRGWQS
Trigger: GCTCTGCCATCCACGCTGTCAACTTGCGCAACTACC...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACCCAGAGAGGTCCCCTTaGGGGGCACAGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHPERSP*GAQAPT
Trigger: AGTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGG...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCTGCACCAGCAGTGTaGTCTCAGCCTTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRPAPAV*SQPSLS
Trigger: GGAAAGGGAAGGCTGAGATCACACTGCTGGTGCAGG...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAATCCCGCACAGCTCCTaGCCCAGCTTGAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQIPHSS*PSLRAA
Trigger: TGCCGCCCTCAAGCTGGGTCAGGAGCTGTGCGGGAT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCGCAGGAAAAGCGCAGTaGGGTCAGCCTTCATCTGGT +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASAGKAQ*GQPSSG
Trigger: ACCAGATGAAGGCTGACCTCACTGCGCTTTTCCTGC...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCAGGAAAAGCGCAGTaGGGTCAGCCTTCATCTGGT +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGAGKAQ*GQPSSG
Trigger: ACCAGATGAAGGCTGACCTCACTGCGCTTTTCCTGC...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAGCAGGAAAAGCGCAGTaGGGTCAGCCTTCATCTGGT +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGAGKAQ*GQPSSG
Trigger: ACCAGATGAAGGCTGACCTCACTGCGCTTTTCCTGC...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR TCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFALADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR TCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTGCAGGTGGTGTCACCTaGGTACATTCTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAAGGVT*VHSLLA
Trigger: TGCTAGCAAAGAATGTACTCAGGTGACACCACCTGC...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTCCCATTGGTGCTGCTTaGGGCTACTGGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTPIGAA*GYWGLW
Trigger: CCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGG...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGCTGCCTGTTGTGGCTaGGGTTCAGCACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVAACCG*GSAPAC
Trigger: ACATGCTGGTGCTGAACCTCAGCCACAACAGGCAGC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545457.6
ENST00000638404.1
CDS-3UTR GCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTAAGTGTTCCAGCTTCTaGAGGGCGGCCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTKCSSF*RAASSS
Trigger: CGAGGAGCTGGCCGCCCTGCAGAAGCTGGAACACTT...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAACGAGCGTCTGCAGGTaGACCAGGCGGCGCATCTGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQTSVCR*TRRRIC
Trigger: GCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATTGAGCACGAGCGTCTaGAGGTGCACCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLSTSV*RCTRRR
Trigger: GCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGAGAGCTGCCGGAGCTGTaGATGCAGCAGGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: TRWFLFRTSFLSFGHLQRELPEL*MQQGVS
Trigger: GGAAACCCCCTGCTGCATGCACAGCTCCGGCAGCTC...TCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGGTTGTGGCTCAAGTCCAGGACTGAGAGATCATCTAGCTTGAAGATGTCATCGCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: WLWLKSRTERSSSLKMSSRRCRV*RAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCG...CGATGACATCTTCAAGCTAGATGATCTCTCAGTCCTGGACTTGAGCCACAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCAGGTTGCTCTGGGTaGGCTGGGTGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAGCSG*AGCSAG
Trigger: ACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTCCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLLLAAMNSSRLVSLPMPPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPEGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCCCCGTGTCAGGTCATTaGAGGACAGATCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVPVSGH*RTDPRL
Trigger: CAGACGTGGATCTGTCCTGCAATGACCTGACACGGG...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCCCCGTGTCAGGTCATTaGAGGACAGATCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCPVSGH*RTDPRL
Trigger: CAGACGTGGATCTGTCCTGCAATGACCTGACACGGG...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCCGTGTCAGGTCATTaGAGGACAGATCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: LAAMNSSRLVSLPMPEGSPVSGH*RTDPRL
Trigger: CAGACGTGGATCTGTCCTGCAATGACCTGACACGGG...GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCTTCAGAGTTTCCACGTaGACCCACTGGTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: GRVYRHSGTRVRSLQDRSFRVST*THWSMH
Trigger: GTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAA...GGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp CAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGTTCAGAGTTTCCACGTaGACCCACTGGTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: QTLGHPCQVIAGQIHVCEFRVST*THWSMH
Trigger: GTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAA...CTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTTCAGCTTGCTCAGCTTaGAAATGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGASACSA*KWLRAV
Trigger: CACTGCCCTCAGCCATTTGCAAGCTGAGCAAGCTGA...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TCCACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGTCAGCTTGCTCAGCTTaGAAATGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: STCTHWSMHRDSSVIWLLSACSA*KWLRAV
Trigger: CACTGCCCTCAGCCATTTGCAAGCTGAGCAAGCTGA...CAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCCACTCCCTGCAGCTaGAGCTGCAGCCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPTPCS*SCSHGS
Trigger: GCTACCGTGGCTGCAGCTGCAGCTGCAGGGAGTGGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCCACTCCCTGCAGCTaGAGCTGCAGCCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLPTPCS*SCSHGS
Trigger: GCTACCGTGGCTGCAGCTGCAGCTGCAGGGAGTGGG...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000638207.2
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACTTGGGCCCACTCCCTaGAGCTGCAGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLGPTP*SCSCSH
Trigger: GTGGCTGCAGCTGCAGCTGCAGGGAGTGGGCCCAAG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGGGCAACATCTGACATaGCCTTCAGCACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRGQHLT*PSAPAW
Trigger: CCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGGGCAACATCTGACATaGCCTTCAGCACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERGQHLT*PSAPAW
Trigger: CCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTTCTGCGCTCTCCTCCTaGTTTTTGTTCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCSALSS*FLFFSW
Trigger: CCAGGAGAAGAACAAAAAGCAGGAGGAGAGCGCAGA...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGTCTGCGCTCTCCTCCTaGTTTTTGTTCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVSALSS*FLFFSW
Trigger: CCAGGAGAAGAACAAAAAGCAGGAGGAGAGCGCAGA...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTCTGCGCTCTCCTCCTaGTTTTTGTTCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAASALSS*FLFFSW
Trigger: CCAGGAGAAGAACAAAAAGCAGGAGGAGAGCGCAGA...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGACGAAGTTCTCTATCTaGCAGATGGTCAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALTKFSI*QMVSPG
Trigger: GCCCGGACTGACCATCTGGCAGATAGAGAACTTCGT...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCAGCCTCGTAGAACTTaGCGTGGAAGGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRQPRRT*RGRLPP
Trigger: TGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CCAGCCCATATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAACAGCCTCGTAGAACTTaGCGTGGAAGGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PAHIGGFTALPEVHDALEQPRRT*RGRLPP
Trigger: TGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTG...TTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATATGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCCAGCCTCGTAGAACTTaGCGTGGAAGGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVQPRRT*RGRLPP
Trigger: TGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTG...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTCAGCCTCGTAGAACTTaGCGTGGAAGGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPQPRRT*RGRLPP
Trigger: TGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTG...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGTCTCCTCCCGGACAGTaGGGCACTCAGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRSPPGQ*GTQHPG
Trigger: ACCTGGGTGCTGAGTGCCGCACTGTCCGGGAGGAGA...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCATCGTTGTCAAACACCTaGAGGAACTCCTCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PARPLMFLGPHVLDIYLASLSNT*RNSSLS
Trigger: TGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAACGA...TGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCTCGTTGTCAAACACCTaGAGGAACTCCTCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPSLSNT*RNSSLS
Trigger: TGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAACGA...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGGCTCCCCACCCAGTaGCTCCCAGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGLPTQ*LPELWE
Trigger: CTCCCAGAGTTCTGGGAGGCACTGGGTGGGGAGCCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCTTGTACAGCTTGGGCTaGGGCGGCCAGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGLYSLG*GGQKSS
Trigger: TGAAGACTTCTGGCCGCCGCAGCCCAAGCTGTACAA...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCATTGTACAGCTTGGGCTaGGGCGGCCAGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRALYSLG*GGQKSS
Trigger: TGAAGACTTCTGGCCGCCGCAGCCCAAGCTGTACAA...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTTTGTACAGCTTGGGCTaGGGCGGCCAGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGLYSLG*GGQKSS
Trigger: TGAAGACTTCTGGCCGCCGCAGCCCAAGCTGTACAA...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCTCCACCTTGGGACGCTaGTTATGTTCCACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVSTLGR*LCSTES
Trigger: GCTCTCCGTGGAACATAAGCAGCGTCCCAAGGTGGA...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTTCCACCTTGGGACGCTaGTTATGTTCCACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGSTLGR*LCSTES
Trigger: GCTCTCCGTGGAACATAAGCAGCGTCCCAAGGTGGA...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGGCACGGCCTCCGCATTaGGTGTGTAGTCCACCGTCA +
Preference number: 4 (lower is better)
Translates to: HQVVLVQDKFPQLWAPAEARPPH*VCSPPS
Trigger: TGACGGTGGACTACACACGCAATGCGGAGGCCGTGC...CTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGAGAGACCCGGGCTCTaGAGCACGGCCTCCGCATTG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQERPGL*STASAL
Trigger: CAATGCGGAGGCCGTGCTGCAGAGCCCGGGTCTCTC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGCGACATGGGCGGCTaGCGCGGCAGGAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSDMGG*RGRKSA
Trigger: TGCGCTTTTCCTGCCGCGGCAGCCGCCCATGTCGCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACACTCCTCCATCAGCTaGTCCGCCTCGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQHSSIS*SASASD
Trigger: GTCGCTGGCCGAGGCGGAGCAGCTGATGGAGGAGTG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCACGAAACCCTCCATaGCGTCTAGGTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGARNPP*RLGLRS
Trigger: GGAACGAAGACCTAGACGGCATGGAGGGTTTCGTGC...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCGCACGAAACCCTCCATaGCGTCTAGGTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASARNPP*RLGLRS
Trigger: GGAACGAAGACCTAGACGGCATGGAGGGTTTCGTGC...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCGCACGAAACCCTCCATaGCGTCTAGGTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIARNPP*RLGLRS
Trigger: GGAACGAAGACCTAGACGGCATGGAGGGTTTCGTGC...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGCCGCGCAAACTTCTTaGCCTCCAGCACGAAACCCT +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVAAQTS*PPARNP
Trigger: AGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCCAGGCACCCAGTACCTaGAGAGGAAGACGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASQAPST*RGRRSS
Trigger: ACTGCTACGTCTTCCTCTGCAGGTACTGGGTGCCTG...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGCCTTCAGCTTCCTCGCCTTCTTTaGCCTCGGCCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PLMFLGPHVLDIYLAGLQLPRLL*PRPSPP
Trigger: AGGAGGAGAAGGCCGAGGGCAAAGAAGGCGAGGAAG...CTGAAGGCCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGCCTTCAGCTCTGCCTCAGCGGTTaGTTCCTCGCCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PLMFLGPHVLDIYLAGLQLCLSG*FLAFFA
Trigger: GGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAG...CTGAAGGCCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGTGGCTGCTTCTCCTCTaGCTCAGCGGTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVWLLLL*LSGCFL
Trigger: GAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCA...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGCCAGAAGTACACGATaGACTGGAAGTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHARSTR*TGSPPL
Trigger: CAGAGGAGGACTTCCAGTGCATCGTGTACTTCTGGC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCCAGAAGTACACGATaGACTGGAAGTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAARSTR*TGSPPL
Trigger: CAGAGGAGGACTTCCAGTGCATCGTGTACTTCTGGC...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGAGGCTTCACGGCCCTaGCAGAAGTACACGATGCAC +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFEASRP*QKYTMH
Trigger: GTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTC...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTGGGTTCTCCTGCTGCTaGGTCATGCGTACCACCTCC +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTGFSCC*VMRTTS
Trigger: GGAGGTGGTACGCATGACGCAGCAGCAGGAGAACCC...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTTTGGGGTTCTCCTGCTaGTGCGTCATGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFALGFSC*CVMRTT
Trigger: GGTGGTACGCATGACGCAGCAGCAGGAGAACCCCAA...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACTTGGGGTTCTCCTGCTaGTGCGTCATGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHLGFSC*CVMRTT
Trigger: GGTGGTACGCATGACGCAGCAGCAGGAGAACCCCAA...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTAACTTGGGGTTCTCCTaGTGCTGCGTCATGCGTACC +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGNLGFS*CCVMRT
Trigger: GGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGGCGCTGCCGTTGGTaGGGATCTGGTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGRCRW*GSGRGW
Trigger: CCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGGTGCAGAGGGCGCTaGCGTTGGTGCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGCRGR*RWCGSG
Trigger: ACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCTGGATGCACCGGGTaGAGAGGGCGCTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSGCTG*RGRCRW
Trigger: CCAACGGCAGCGCCCTCTGCACCCGGTGCATCCAGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTGTTCAGGATGTCTTCTaGCAACTTGGCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAVQDVF*QLGFVR
Trigger: CCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAAC...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp TGTGCATGCAGCAGGGGGTTTCCATTGAGCACGAGCGTCTGCAGGTGCACCAGGGTTCAGGATGTCTTCTaGCAACTTGGCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: CACSRGFPLSTSVCRCTRVQDVF*QLGFVR
Trigger: CCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAAC...CCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCGCTTCTGTGCCCCAATaGCCACCCAGAAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCASVPQ*PPRRSS
Trigger: AGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGC...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp TGTGCATGCAGCAGGGGGTTTCCATTGAGCACGAGCGTCTGCAGGTGCACCAGGTCCTTGGACCGCATGTaGTGGATATATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CACSRGFPLSTSVCRCTRSLDRM*WIYTWQ
Trigger: CTGCCAGGTATATATCCAGCACATGCGGTCCAAGGA...CCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTRVKAC*SLPLRT
Trigger: GGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCG...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCAGGGGGCTTCACACGTaGACTCACACTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCRGLHT*THTVER
Trigger: TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGAGGGGGCTTCACACGTaGACTCACACTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRRGLHT*THTVER
Trigger: TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCAGGGGGCTTCACACGTaGACTCACACTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPRGLHT*THTVER
Trigger: TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTGAAGCACAGAGCCCCTaGTCACCACCTTCTATGGCT +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGEAQSP*SPPSMA
Trigger: AGCCATAGAAGGTGGTGAGCAGGGGCTCTGTGCTTC...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGTGGTCAGGTTGTTGTaGCTCACAGACAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLVVRLL*LTDKCS
Trigger: GGAACACTTGTCTGTGAGCCACAACAACCTGACCAC...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCGTGGTCAGGTTGTTGTaGCTCACAGACAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPVVRLL*LTDKCS
Trigger: GGAACACTTGTCTGTGAGCCACAACAACCTGACCAC...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCGCTCCCCATGAAGCGTaGTCAGGTTGTTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVAPHEA*SGCCGS
Trigger: TGAGCCACAACAACCTGACCACGCTTCATGGGGAGC...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCGCTCCCCATGAAGCGTaGTCAGGTTGTTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIAPHEA*SGCCGS
Trigger: TGAGCCACAACAACCTGACCACGCTTCATGGGGAGC...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGAATTCTTCAGACTGTTaGCTCGGGCCACGATGGCGC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRNSSDC*LGPRWR
Trigger: GCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATT...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCAATTCTTCAGACTGTTaGCTCGGGCCACGATGGCGC +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPNSSDC*LGPRWR
Trigger: GCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATT...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTAATTCTTCAGACTGTTaGCTCGGGCCACGATGGCGC +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGNSSDC*LGPRWR
Trigger: GCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATT...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTAATTCTTCAGACTGTTaGCTCGGGCCACGATGGCGC +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPNSSDC*LGPRWR
Trigger: GCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATT...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTGCACCAGCATGTTCTTaGCGTTCTCCAGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFAPACS*RSPAPA
Trigger: CGCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGC...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCAGAGCTGGTTGGGGATaGTGTCGATGCTGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPRAGWG*CRCCCG
Trigger: GCCACAACAGCATCGACACCATCCCCAACCAGCTCT...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR CCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAAGAGCTGGTTGGGGATaGTGTCGATGCTGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERRAGWG*CRCCCG
Trigger: GCCACAACAGCATCGACACCATCCCCAACCAGCTCT...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLLWVR*VLRRCR
Trigger: CCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGACCCTCCAGGCTGGTaGGCAGGTTGCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQDPPGW*AGCSGC
Trigger: GCACCCAGAGCAACCTGCCCACCAGCCTGGAGGGTC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GTTGTCAAACACCTGCAGGAACTCCTCGCTCTCATCGCCCATCTCCTCCCGGACGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: VVKHLQELLALIAHLLPDGRVTR*FLFRTS
Trigger: ACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCC...GTCCGGGAGGAGATGGGCGATGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTCCGTCAGGAAATGGATaGCTTCTGGGAGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGPSGNG*LLGGSP
Trigger: TGGTGACCCTCCCAGAAGCCATCCATTTCCTGACGG...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGACCGTCAGGAAATGGATaGCTTCTGGGAGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERPSGNG*LLGGSP
Trigger: TGGTGACCCTCCCAGAAGCCATCCATTTCCTGACGG...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGATCTCCGTCAGGAAATaGATGGCTTCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALISVRK*MASGRV
Trigger: GACCCTCCCAGAAGCCATCCATTTCCTGACGGAGAT...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTTGGCCTGGTCATCCTaGGCTGAATCCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQLAWSS*AESLRL
Trigger: GAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAA...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGATTGGCCTGGTCATCCTaGGCTGAATCCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRLAWSS*AESLRL
Trigger: GAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAA...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGCTTCTCCAGGCCCTaGTCCCAACGCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGFSRP*SQRRTF
Trigger: GAAGGTGCGGCGTTGGGACCAGGGCCTGGAGAAGCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGTCAGTCCGGGCAGCTaGCCCACGTCCTCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQVSPGS*PTSSVK
Trigger: CTTCACGGAGGACGTGGGCCAGCTGCCCGGACTGAC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGTCTCTATCTGCCAGATaGTCAGTCCGGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWSLSAR*SVRAAG
Trigger: GCCAGCTGCCCGGACTGACCATCTGGCAGATAGAGA...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGATCTCTATCTGCCAGATaGTCAGTCCGGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRSLSAR*SVRAAG
Trigger: GCCAGCTGCCCGGACTGACCATCTGGCAGATAGAGA...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGTCTCTATCTGCCAGATaGTCAGTCCGGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPESLSAR*SVRAAG
Trigger: GCCAGCTGCCCGGACTGACCATCTGGCAGATAGAGA...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCTTTCTTGTCGAGTGTaGCCTCCCCGCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRLSCRV*PPRQSS
Trigger: ACTGGATTGGCGGGGAGGCCACACTCGACAAGAAAG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTCTTTCTTGTCGAGTGTaGCCTCCCCGCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILLSCRV*PPRQSS
Trigger: ACTGGATTGGCGGGGAGGCCACACTCGACAAGAAAG...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCAGGAAAACAAACCTTaGGTCCAGAGAGGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVQENKP*VQRGPL
Trigger: AAGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTG...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATCTCTGCAAAGAGCCTaGCCTTGGTGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGSLQRA*PWWCCS
Trigger: TGAGCAGCACCACCAAGGCCAGGCTCTTTGCAGAGA...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCTCTCTGCAAAGAGCCTaGCCTTGGTGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVISLQRA*PWWCCS
Trigger: TGAGCAGCACCACCAAGGCCAGGCTCTTTGCAGAGA...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCTCTCTGCAAAGAGCCTaGCCTTGGTGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASSLQRA*PWWCCS
Trigger: TGAGCAGCACCACCAAGGCCAGGCTCTTTGCAGAGA...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCGCATCAGCTCCACCTTaGGACGCTGCTTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPASAPP*DAAYVP
Trigger: TGGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGC...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCAGGTCAGCCTTCATCTaGTCTTTCTTCTCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTRSAFI*SFFSAS
Trigger: CGACGCCGAGAAGAAAGACCAGATGAAGGCTGACCT...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ACGTGCACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTCAGCCTTCATCTaGTCTTTCTTCTCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: TCTHWSMHRDSSVIWLLLRSAFI*SFFSAS
Trigger: CGACGCCGAGAAGAAAGACCAGATGAAGGCTGACCT...CAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTGCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCAAGTACACGATGCACTaGAAGTCCTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCKYTMH*KSSSGC
Trigger: GCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTT...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCAATGGGACAGGAACTTaGGGTTCTCCTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCNGTGT*GSPAAA
Trigger: CGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATT...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCAATGGGACAGGAACTTaGGGTTCTCCTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVINGTGT*GSPAAA
Trigger: CGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATT...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAAATGGGACAGGAACTTaGGGTTCTCCTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGNGTGT*GSPAAA
Trigger: CGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATT...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACAGAGGGCGCTGCCGTTaGTGCGGATCTGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHRGRCR*CGSGRG
Trigger: GCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCT...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCATACACGATGCCCTaGTTGTCCTCACTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVAYTMP*LSSLSK
Trigger: CTTTGAGAGTGAGGACAACCAGGGCATCGTGTATGC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCATACACGATGCCCTaGTTGTCCTCACTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCAYTMP*LSSLSK
Trigger: CTTTGAGAGTGAGGACAACCAGGGCATCGTGTATGC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTAGTAGCCCTTCTCGTTaGAGCACCGGAAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGSSPSR*STGRDV
Trigger: CACGTCTCTTCCGGTGCTCCAACGAGAAGGGCTACT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAAGTAGCCCTTCTCGTTaGAGCACCGGAAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGSSPSR*STGRDV
Trigger: CACGTCTCTTCCGGTGCTCCAACGAGAAGGGCTACT...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR CCA 90 bp CAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGATCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: QAGEGVQTLGHPCQVIAGSARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...TCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGAGCTTGATCTCCACCTaGCTAGTCTGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPESLIST*LVWVPT
Trigger: GGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCT...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCTTGATCTCCACCTaGCTAGTCTGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFASLIST*LVWVPT
Trigger: GGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCT...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTTTGGACCGCATGTGCTaGATATATACCTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTLDRMC*IYTWQA
Trigger: GGCCTGCCAGGTATATATCCAGCACATGCGGTCCAA...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCATTGGACCGCATGTGCTaGATATATACCTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: AMNSSRLVSLPMPEGSPSLDRMC*IYTWQA
Trigger: GGCCTGCCAGGTATATATCCAGCACATGCGGTCCAA...TGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATAT +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALAAHVP*TACAGY
Trigger: ATATCCAGCACATGCGGTCCAAGGAACATGAGCGGC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATAT +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTAAHVP*TACAGY
Trigger: ATATCCAGCACATGCGGTCCAAGGAACATGAGCGGC...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTCTGTGGCACTGGACGTaGCTGGAGCAGGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTLWHWT*LEQVVS
Trigger: TGACACCACCTGCTCCAGCCACGTCCAGTGCCACAG...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCCACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGTTGGACCGCATGTGCTaGATATATACCTGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVLDRMC*IYTWQG
Trigger: CCCTTGCCAGGTATATATCCAGCACATGCGGTCCAA...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS-3UTR CCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGCCGCTCATGTTCCTTaGGTCCAGAGAGGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVAAHVP*VQRGPL
Trigger: AAGGGGACCTCTCTGGACCCAAGGAACATGAGCGGC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578558.5
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCGGAGGTCCATTCCTaGCCAGGGGAGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSEVHS*PGESPT
Trigger: GGTGGGGCTCTCCCCTGGCCAGGAATGGACCTCCGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000579294.5
ENST00000638812.1
3UTR CAA 72 bp TCCAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTaGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: SRLLLAAMNSSR*VSLPMPEGSPS
Trigger: TGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
3UTR CAA 72 bp GTGTCAAACATGGTGTTCAGGATGTCTTCTGCCAACTaGGCTTCGTCAGGGTCTGATGCCCGGCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: VSNMVFRMSSAN*ASSGSDARPTQ
Trigger: CTGGGTGGGCCGGGCATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAACACCATGTTTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCTGGTCATGGCCTTaGCATTCTCAGGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPEGWSWP*HSQGSS
Trigger: GCTACTTCCCTGAGAATGTCAAGGCCATGACCAGCC...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CCTTCTCGTTGGAGCACCGGAAGAGACGTGTGTGTTTCATGTACTCGGCATCGTCTGGACAGCTCCCCATaGAGCGTGGTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: PSRWSTGRDVCVSCTRHRLDSSP*SVVRLL
Trigger: CAACAACCTGACCACGCTTCATGGGGAGCTGTCCAG...ACGATGCCGAGTACATGAAACACACACGTCTCTTCCGGTGCTCCAACGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGAGAGATCATCTAGCTTaGAGATGTCATCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVRDHLA*RCHRGL
Trigger: GAGTCCCCGATGACATCTTCAAGCTAGATGATCTCT...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGAGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TRWFLFRTSFLSFGHLQRAGGFH*ARASAG
Trigger: ACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGC...TCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRGSEVS*FRDRFR
Trigger: TCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCTGAGGGCAGTGAGGTaGGCTGATTTCGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFLRAVR*ADFGTG
Trigger: ACCTGTCCCGAAATCAGCTCACCTCACTGCCCTCAG...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGACTCTTCCAGGTTGGTaGGCTTGCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPETLPGW*ACQCLR
Trigger: CCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGT...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTACTCTTCCAGGTTGGTaGGCTTGCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFATLPGW*ACQCLR
Trigger: CCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGT...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACTGGTCATCCTGGGCTaGATCCTTGCGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLVILG*ILAPPQ
Trigger: CTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGCTCCTGGGCAACATCTaGCATGCCCTTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMLLGNI*HALQHL
Trigger: CAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAG...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTGGCCCACGTCCTCCGTaGAGAACTCGGAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTGPRPP*RTRSSQ
Trigger: TTGACTACTCCGAGTTCTTCACGGAGGACGTGGGCC...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGAGTAGATCTCCCAGTTaGGGGAGCCGCTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVSRSPS*GSRCHP
Trigger: TGGATGACAGCGGCTCCCTCAACTGGGAGATCTACT...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGCACGATACATCCTGGTaGCATAGTGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GHPCQVIAGQIHVCEVAQHDTSW*HSVCLP
Trigger: TGGAAGACACACACTATGTCACCAGGATGTATCGTG...CTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTCACGATACATCCTGGTaGCATAGTGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCHDTSW*HSVCLP
Trigger: TGGAAGACACACACTATGTCACCAGGATGTATCGTG...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCAGAGAGGTCCCCTTaGGGGGCACAGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPERSP*GAQAPT
Trigger: AGTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTCCTGCACCAGCAGTGTaGTCTCAGCCTTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTPAPAV*SQPSLS
Trigger: GGAAAGGGAAGGCTGAGATCACACTGCTGGTGCAGG...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCTGCACCAGCAGTGTaGTCTCAGCCTTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFPAPAV*SQPSLS
Trigger: GGAAAGGGAAGGCTGAGATCACACTGCTGGTGCAGG...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR TCA 90 bp AGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGAGCACCGGAAGAGACCAGGCACGTGCTTCTTaGTCTCAGAGGGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SISQSLQSSPSRWSTGRDQARAS*SQRAPH
Trigger: GTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTG...GTCTCTTCCGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGTGCGGCCGAGCCAGATaGACACGTCGGACCAACAGT +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRCGRAR*TRRTNS
Trigger: ACTGTTGGTCCGACGTGTTCATCTGGCTCGGCCGCA...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGGCAGGAAAAGCGCAGTaGGGTCAGCCTTCATCTGGT +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWAGKAQ*GQPSSG
Trigger: ACCAGATGAAGGCTGACCTCACTGCGCTTTTCCTGC...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGCTGGAGTCGGTGTTaGTCTGGATGCACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGWSRC*SGCTGC
Trigger: GCACCCGGTGCATCCAGATCAACACCGACTCCAGCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGCAGGTGGTGTCACCTaGGTACATTCTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALAGGVT*VHSLLA
Trigger: TGCTAGCAAAGAATGTACTCAGGTGACACCACCTGC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGCAGGTGGTGTCACCTaGGTACATTCTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTAGGVT*VHSLLA
Trigger: TGCTAGCAAAGAATGTACTCAGGTGACACCACCTGC...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGCAGGTGGTGTCACCTaGGTACATTCTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHAGGVT*VHSLLA
Trigger: TGCTAGCAAAGAATGTACTCAGGTGACACCACCTGC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGCCGGAGCTGTGCATaGAGCAGGGGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: QVVVGSHELFQVGELANACRSCA*SRGFPL
Trigger: CAATGGAAACCCCCTGCTGCATGCACAGCTCCGGCA...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGAGCTGCCGGAGCTGTaGATGCAGCAGGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQELPEL*MQQGVS
Trigger: GGAAACCCCCTGCTGCATGCACAGCTCCGGCAGCTC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCACGTCTGCGAGGTTaGTCAGACCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPRLRG*SDPPGW
Trigger: CCAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: QVVVGSHELFQVGELANAGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACACCCGTGTCAGGTCATTaGAGGACAGATCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: FGTGSEFPRAPTGLCTGTPVSGH*RTDPRL
Trigger: CAGACGTGGATCTGTCCTGCAATGACCTGACACGGG...TGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTTCAGAGTTTCCACGTaGACCCACTGGTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHFRVST*THWSMH
Trigger: GTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAA...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTTTCAGAGTTTCCACGTaGACCCACTGGTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAFRVST*THWSMH
Trigger: GTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAA...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGATCAGCTTGCTCAGCTTaGAAATGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERSACSA*KWLRAV
Trigger: CACTGCCCTCAGCCATTTGCAAGCTGAGCAAGCTGA...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GATCTCCACCTGGCTAGTCTGGGTCCCCACCCACATGTAGACCTCTTGGCCATTTCAGCTTGCTCAGCTTaGAAATGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: DLHLASLGPHPHVDLLAISACSA*KWLRAV
Trigger: CACTGCCCTCAGCCATTTGCAAGCTGAGCAAGCTGA...AATGGCCAAGAGGTCTACATGTGGGTGGGGACCCAGACTAGCCAGGTGGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTTCAGCTTTGGGCACCTaGAGAGACTTTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGSALGT*RDFQGP
Trigger: TGGTCCCTGAAAGTCTCTGCAGGTGCCCAAAGCTGA...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTCAGCTTTGGGCACCTaGAGAGACTTTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILSALGT*RDFQGP
Trigger: TGGTCCCTGAAAGTCTCTGCAGGTGCCCAAAGCTGA...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCCTGCAGCTGCAGCTaGAGCCACGGTAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPCSCS*SHGSRR
Trigger: TCTCCTGCTACCGTGGCTGCAGCTGCAGCTGCAGGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACCCTGGGCTGAATCCTTaGGCCTCCGCAGTCGCATCT +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHPGLNP*ASAVAS
Trigger: AGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGG...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGGGCAACATCTGACATaGCCTTCAGCACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFGQHLT*PSAPAW
Trigger: CCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCC...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTTCTGCGCTCTCCTCCTaGTTTTTGTTCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GCTDTRAPVSGHCRTDPRSALSS*FLFFSW
Trigger: CCAGGAGAAGAACAAAAAGCAGGAGGAGAGCGCAGA...ACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGGGGCCCGGGCATCTaGGCTCTCCTCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGGPGI*ALLLLF
Trigger: AAAAAGCAGGAGGAGAGCGCAGATGCCCGGGCCCCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTACGAAGTTCTCTATCTaGCAGATGGTCAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGTKFSI*QMVSPG
Trigger: GCCCGGACTGACCATCTGGCAGATAGAGAACTTCGT...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGACGAAGTTCTCTATCTaGCAGATGGTCAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRTKFSI*QMVSPG
Trigger: GCCCGGACTGACCATCTGGCAGATAGAGAACTTCGT...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCTCCTCCCGGACAGTaGGGCACTCAGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSPPGQ*GTQHPG
Trigger: ACCTGGGTGCTGAGTGCCGCACTGTCCGGGAGGAGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTCGTTGTCAAACACCTaGAGGAACTCCTCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHSLSNT*RNSSLS
Trigger: TGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAACGA...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTCGTTGTCAAACACCTaGAGGAACTCCTCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPSLSNT*RNSSLS
Trigger: TGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAACGA...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTAAGTCTTCAGGCACGTaGTTCTTGATCTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAKSSGT*FLISEG
Trigger: GCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTT...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAAGTCTTCAGGCACGTaGTTCTTGATCTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLKSSGT*FLISEG
Trigger: GCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTT...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTGTGTCCAGCAGACTCTaGAGCAGCCGCATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFVSSRL*SSRILG
Trigger: GCCAAGAATGCGGCTGCTGCAGAGTCTGCTGGACAC...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATTGGCCTTGAACACCTaGGCCTCGGTGCCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLALNT*ASVPSR
Trigger: CCTCGAGGGCACCGAGGCGCAGGTGTTCAAGGCCAA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTGCACGAAACCCTCCATaGCGTCTAGGTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAARNPP*RLGLRS
Trigger: GGAACGAAGACCTAGACGGCATGGAGGGTTTCGTGC...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTCAGGCACCCAGTACCTaGAGAGGAAGACGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAQAPST*RGRRSS
Trigger: ACTGCTACGTCTTCCTCTGCAGGTACTGGGTGCCTG...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTTGGCTGCTTCTCCTCTaGCTCAGCGGTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFWLLLL*LSGCFL
Trigger: GAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCA...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp GATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGTGGCTGCTTCTCCTCTaGCTCAGCGGTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: DGFWEGHQVVLVQDKFPQWLLLL*LSGCFL
Trigger: GAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCA...CTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGGAGGCTTCACGGCCCTaGCAGAAGTACACGATGCAC +
Preference number: 4 (lower is better)
Translates to: HQVVLVQDKFPQLWAPAEEASRP*QKYTMH
Trigger: GTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTC...CTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGAACTTGGGGTTCTCCTaGTGCTGCGTCATGCGTACC +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWNLGFS*CCVMRT
Trigger: GGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTT...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GCAGAACTCGGAGTTGAGGAGGCTGGAGTCGGTGTTGATCTGGATGCACCGGGTGTTCAGGATGTCTTCTaGCAACTTGGCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: AELGVEEAGVGVDLDAPGVQDVF*QLGFVR
Trigger: CCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAAC...ACCCGGTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGGTTCAGGATGTCTTCTaGCAACTTGGCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLVQDVF*QLGFVR
Trigger: CCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAAC...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCGCTTCTGTGCCCCAATaGCCACCCAGAAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPASVPQ*PPRRSS
Trigger: AGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGC...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR GCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGCTTCTGTGCCCCAATaGCCACCCAGAAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRAASVPQ*PPRRSS
Trigger: AGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGC...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTGCTTCTGTGCCCCAATaGCCACCCAGAAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGASVPQ*PPRRSS
Trigger: AGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGC...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGAFLSH*KVALLV
Trigger: AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGC...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGGCGTGCTGCTCATTaGCCTTGCGGACCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRRAAH*PCGPGA
Trigger: TGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCAAGCCTGGGGCTGTaGCAGCCTGTCTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPSLGL*QPVLGQ
Trigger: CTGGCCTAAGACAGGCTGGCACAGCCCCAGGCTTGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGGTCATCCCCATTGGTaGTGCTTGAGGCTACTGGGG +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTGHPHW*CLRLLG
Trigger: CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACC...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGAGGGGGCTTCACACGTaGACTCACACTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQRGLHT*THTVER
Trigger: TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACAGGGGGCTTCACACGTaGACTCACACTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHRGLHT*THTVER
Trigger: TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGAAGGGCATCCACATCTaGTTTATCCCTAGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLKGIHI*FIPSGR
Trigger: TCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTT...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGAAGGGCATCCACATCTaGTTTATCCCTAGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GAAAHVPWTACAGYIPGRKGIHI*FIPSGR
Trigger: TCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTT...CCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
CDS-3UTR GCA 90 bp CCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAAAGGGCATCCACATCTaGTTTATCCCTAGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PARPLMFLGPHVLDIYLAKGIHI*FIPSGR
Trigger: TCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTT...TGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
CDS-3UTR CCA 90 bp AGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGGTGGTCAGGTTGTTGTaGCTCACAGACAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RVYRHSGTRVRSLQDRSTVVRLL*LTDKCS
Trigger: GGAACACTTGTCTGTGAGCCACAACAACCTGACCAC...CGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGGCTCCCCATGAAGCGTaGTCAGGTTGTTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWAPHEA*SGCCGS
Trigger: TGAGCCACAACAACCTGACCACGCTTCATGGGGAGC...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTCCCCATGAAGCGTaGTCAGGTTGTTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFAPHEA*SGCCGS
Trigger: TGAGCCACAACAACCTGACCACGCTTCATGGGGAGC...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCAGCGATGGCAGGCTaGACAGCTCCCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAAMAG*TAPHEA
Trigger: CGCTTCATGGGGAGCTGTCCAGCCTGCCATCGCTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGCACCAGCATGTTCTTaGCGTTCTCCAGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: RLLLAAMNSSRLVSLPMPAPACS*RSPAPA
Trigger: CGCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGC...AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACGCACCAGCATGTTCTTaGCGTTCTCCAGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHAPACS*RSPAPA
Trigger: CGCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGC...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGAGAGCTGGTTGGGGATaGTGTCGATGCTGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWRAGWG*CRCCCG
Trigger: GCCACAACAGCATCGACACCATCCCCAACCAGCTCT...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000638207.2
ENST00000639036.1
CDS-3UTR CCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCAGGTTGATGAAGAGCTaGTTGGGGATGGTGTCGATG +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTRLMKS*LGMVSM
Trigger: CATCGACACCATCCCCAACCAGCTCTTCATCAACCT...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCAGACCCTCCAGGCTaGTGGGCAGGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSDPPG*WAGCSG
Trigger: CCCAGAGCAACCTGCCCACCAGCCTGGAGGGTCTGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPEDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILGRVTR*FLFRTS
Trigger: ACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCC...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: LAAMNSSRLVSLPMPEGSGRVTR*FLFRTS
Trigger: ACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCC...GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIGRVTR*FLFRTS
Trigger: ACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCC...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCGAAATGGATGGCTTCTaGGAGGGTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGEMDGF*EGHQVV
Trigger: AACCACCTGGTGACCCTCCCAGAAGCCATCCATTTC...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCGAAATGGATGGCTTCTaGGAGGGTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIEMDGF*EGHQVV
Trigger: AACCACCTGGTGACCCTCCCAGAAGCCATCCATTTC...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CAGCTTGATCTCCACCTGGCTAGTCTGGGTCCCCACCCACATGTAGACCTCTTGATCTCCGTCAGGAAATaGATGGCTTCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: QLDLHLASLGPHPHVDLLISVRK*MASGRV
Trigger: GACCCTCCCAGAAGCCATCCATTTCCTGACGGAGAT...CAAGAGGTCTACATGTGGGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTATCTCCGTCAGGAAATaGATGGCTTCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGISVRK*MASGRV
Trigger: GACCCTCCCAGAAGCCATCCATTTCCTGACGGAGAT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCATCTCCGTCAGGAAATaGATGGCTTCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGISVRK*MASGRV
Trigger: GACCCTCCCAGAAGCCATCCATTTCCTGACGGAGAT...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTTTGGCCTGGTCATCCTaGGCTGAATCCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFLAWSS*AESLRL
Trigger: GAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAA...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCATCTCTATCTGCCAGATaGTCAGTCCGGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GHQVVLVQDKFPQLWAPASLSAR*SVRAAG
Trigger: GCCAGCTGCCCGGACTGACCATCTGGCAGATAGAGA...TGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCCGCAAGTTGACAGCGTaGATGGCAGAGCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVRKLTA*MAEQAF
Trigger: GAAAGCTTGCTCTGCCATCCACGCTGTCAACTTGCG...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTCGCAAGTTGACAGCGTaGATGGCAGAGCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGRKLTA*MAEQAF
Trigger: GAAAGCTTGCTCTGCCATCCACGCTGTCAACTTGCG...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TGGGCACCTGCAGAGACTTTCAGGGACCAGCTCCAGGTTGTTGTTGGCAGCCATCGCAAGTTGACAGCGTaGATGGCAGAGCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: WAPAETFRDQLQVVVGSHRKLTA*MAEQAF
Trigger: GAAAGCTTGCTCTGCCATCCACGCTGTCAACTTGCG...ATGGCTGCCAACAACAACCTGGAGCTGGTCCCTGAAAGTCTCTGCAGGTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTCGCAAGTTGACAGCGTaGATGGCAGAGCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: HPLVYAQGQLRDLVAAEVRKLTA*MAEQAF
Trigger: GAAAGCTTGCTCTGCCATCCACGCTGTCAACTTGCG...AACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCCGCAAGTTGACAGCGTaGATGGCAGAGCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCRKLTA*MAEQAF
Trigger: GAAAGCTTGCTCTGCCATCCACGCTGTCAACTTGCG...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCAGGAAAACAAACCTTaGGTCCAGAGAGGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GCTDTRAPVSGHCRTDPRQENKP*VQRGPL
Trigger: AAGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTG...ACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATCAGGAAAACAAACCTTaGGTCCAGAGAGGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHQENKP*VQRGPL
Trigger: AAGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTG...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTTCTCTGCAAAGAGCCTaGCCTTGGTGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFASLQRA*PWWCCS
Trigger: TGAGCAGCACCACCAAGGCCAGGCTCTTTGCAGAGA...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATGCCTCCCAGAACTCTaGGAGCTCCTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQCLPEL*ELLALH
Trigger: GTGCAGGGCCAGGAGCTCCCAGAGTTCTGGGAGGCA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTTGCCTCCCAGAACTCTaGGAGCTCCTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLCLPEL*ELLALH
Trigger: GTGCAGGGCCAGGAGCTCCCAGAGTTCTGGGAGGCA...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACCCACCTTGTACAGCTTaGGCTGCGGCGGCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHPPCTA*AAAARS
Trigger: ACTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGG...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGAAGTACACGATGCACTaGAAGTCCTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRKYTMH*KSSSGC
Trigger: GCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTT...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCAAGTACACGATGCACTaGAAGTCCTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIKYTMH*KSSSGC
Trigger: GCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTT...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGAACTTCCTCTTGAAATaGGACAGGAACTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRNFLLK*DRNLGF
Trigger: GAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTT...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGATCTGGTAGAGGCTaGGCTGTTGGGCGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGSGRG*AVGRPG
Trigger: TCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTAGAGGGCGCTGCCGTTaGTGCGGATCTGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLRGRCR*CGSGRG
Trigger: GCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCT...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGAGGGCGCTGCCGTTaGTGCGGATCTGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRGRCR*CGSGRG
Trigger: GCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCTTCTGCCAACTTaGCTTCGTCAGGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTCLLPT*LRQGLM
Trigger: CATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACA...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTTGTCTTCTGCCAACTTaGCTTCGTCAGGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGACLLPT*LRQGLM
Trigger: CATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACA...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAAGTAGCCCTTCTCGTTaGAGCACCGGAAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRSSPSR*STGRDV
Trigger: CACGTCTCTTCCGGTGCTCCAACGAGAAGGGCTACT...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR CCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCTGCTGGATATATACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVICWIYT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTATATATCCAGCA...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCTGCTGGATATATACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPCWIYT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTATATATCCAGCA...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTGGATATATACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILCWIYT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTATATATCCAGCA...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTTTGGACCGCATGTGCTaGATATATACCTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGLDRMC*IYTWQA
Trigger: GGCCTGCCAGGTATATATCCAGCACATGCGGTCCAA...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATAT +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRAAHVP*TACAGY
Trigger: ATATCCAGCACATGCGGTCCAAGGAACATGAGCGGC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCCACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GATCTCCACCTGGCTAGTCTGGGTCCCCACCCACATGTAGACCTCTTGGCCATTCACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: DLHLASLGPHPHVDLLAIHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...AATGGCCAAGAGGTCTACATGTGGGTGGGGACCCAGACTAGCCAGGTGGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGACACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTTCCACCCAGATTACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTSTQIT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTAATCTGGGTGGA...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS-3UTR CCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTGGATATATACCTaGCAAGGGGACAGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILCWIYT*QGDSEP
Trigger: AGGCTCGCTGTCCCCTTGCCAGGTATATATCCAGCA...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS-3UTR CCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGTTGGACCGCATGTGCTaGATATATACCTGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLLDRMC*IYTWQG
Trigger: CCCTTGCCAGGTATATATCCAGCACATGCGGTCCAA...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
3UTR CAA 72 bp TTTTGCAGGCTGAAGGTGAAGGTGAGCCAGCCCATATaGGAGGCTTCACGGCCCTGCCAGAAGTACACGATG +
Preference number: 4 (lower is better)
Translates to: FCRLKVKVSQPI*EASRPCQKYTM
Trigger: CATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATATGGGCTGGCTCACCTTCACCTTCAGCCTGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCAGAGATCATCTAGCTTaGAGATGTCATCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCRDHLA*RCHRGL
Trigger: GAGTCCCCGATGACATCTTCAAGCTAGATGATCTCT...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAGGFH*ARASAG
Trigger: ACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTGSEVS*FRDRFR
Trigger: TCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCC...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGAGCTTGCCAATGCCTaGGGGCAGCCCGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQELANA*GQPVKV
Trigger: GACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGCATCCAGAAAGGTCTTaGGCACAATGTAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLHPERS*AQCSSQ
Trigger: CTGACTGCTACATTGTGCTCAAGACCTTTCTGGATG...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCCATCCAGAAAGGTCTTaGGCACAATGTAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: HVHSHCGESWISQTPEGTHPERS*AQCSSQ
Trigger: CTGACTGCTACATTGTGCTCAAGACCTTTCTGGATG...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGTAGATCTCCCAGTTaGGGGAGCCGCTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMSRSPS*GSRCHP
Trigger: TGGATGACAGCGGCTCCCTCAACTGGGAGATCTACT...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCACAGGCTCCAACTTaGTGTTCTTTTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCAQAPT*CSFSHT
Trigger: TGTATGGGAAAAAGAACATCAAGTTGGAGCCTGTGC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACAGGCACGTGCTTCTTaGTCTCAGAGGGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQQARAS*SQRAPH
Trigger: GTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATGCGGCCGAGCCAGATaGACACGTCGGACCAACAGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQCGRAR*TRRTNS
Trigger: ACTGTTGGTCCGACGTGTTCATCTGGCTCGGCCGCA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCGCAGGAAAAGCGCAGTaGGGTCAGCCTTCATCTGGT +
Preference number: 4 (lower is better)
Translates to: QVVVGSHELFQVGELANAAGKAQ*GQPSSG
Trigger: ACCAGATGAAGGCTGACCTCACTGCGCTTTTCCTGC...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCGCAGGTGGTGTCACCTaGGTACATTCTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASAGGVT*VHSLLA
Trigger: TGCTAGCAAAGAATGTACTCAGGTGACACCACCTGC...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR TCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCGCAGGTGGTGTCACCTaGGTACATTCTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGAGGVT*VHSLLA
Trigger: TGCTAGCAAAGAATGTACTCAGGTGACACCACCTGC...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCGCAGGTGGTGTCACCTaGGTACATTCTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVAGGVT*VHSLLA
Trigger: TGCTAGCAAAGAATGTACTCAGGTGACACCACCTGC...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGCAGGTGGTGTCACCTaGGTACATTCTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERAGGVT*VHSLLA
Trigger: TGCTAGCAAAGAATGTACTCAGGTGACACCACCTGC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGCAGGTGGTGTCACCTaGGTACATTCTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPAGGVT*VHSLLA
Trigger: TGCTAGCAAAGAATGTACTCAGGTGACACCACCTGC...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGTAGCAGAGGCCAGTaGGGTTCAGCTTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGSRGQ*GSASAT
Trigger: GGTGGCTGAAGCTGAACCGCACTGGCCTCTGCTACC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGAAGTGTTCCAGCTTCTaGAGGGCGGCCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LGKSRSISQSLQSSPSRWKCSSF*RAASSS
Trigger: CGAGGAGCTGGCCGCCCTGCAGAAGCTGGAACACTT...CCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAAGTGTTCCAGCTTCTaGAGGGCGGCCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQKCSSF*RAASSS
Trigger: CGAGGAGCTGGCCGCCCTGCAGAAGCTGGAACACTT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCCCCGTGTCAGGTCATTaGAGGACAGATCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: QVVVGSHELFQVGELANAPVSGH*RTDPRL
Trigger: CAGACGTGGATCTGTCCTGCAATGACCTGACACGGG...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGCCCGTGTCAGGTCATTaGAGGACAGATCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: VTRWFLFRTSFLSFGHLQPVSGH*RTDPRL
Trigger: CAGACGTGGATCTGTCCTGCAATGACCTGACACGGG...CTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGTTCAGAGTTTCCACGTaGACCCACTGGTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRFRVST*THWSMH
Trigger: GTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAA...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTTTCAGAGTTTCCACGTaGACCCACTGGTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPFRVST*THWSMH
Trigger: GTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAA...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGTTCAGAGTTTCCACGTaGACCCACTGGTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: SGQVQSFHVHPLVYAQGQFRVST*THWSMH
Trigger: GTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAA...CTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR GCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTTCAGCTTTGGGCACCTaGAGAGACTTTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFSALGT*RDFQGP
Trigger: TGGTCCCTGAAAGTCTCTGCAGGTGCCCAAAGCTGA...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCTGGGCTGAATCCTTaGGCCTCCGCAGTCGCATCT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPGLNP*ASAVAS
Trigger: AGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGATGCCCTTCAGCACCTaGTTGGCCTGGTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRMPFST*LAWSSW
Trigger: CCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCAT...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACATGCCCTTCAGCACCTaGTTGGCCTGGTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHMPFST*LAWSSW
Trigger: CCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCAT...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTGGGCAACATCTGACATaGCCTTCAGCACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTGQHLT*PSAPAW
Trigger: CCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCC...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGGTTGTGGCTCAAGTCCAGGACTGAGAGATCATCTAGCTTGAAGATGTCATCGGGGGGCCCGGGCATCTaGGCTCTCCTCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: WLWLKSRTERSSSLKMSSGGPGI*ALLLLF
Trigger: AAAAAGCAGGAGGAGAGCGCAGATGCCCGGGCCCCC...CGATGACATCTTCAAGCTAGATGATCTCTCAGTCCTGGACTTGAGCCACAACCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGACGAAGTTCTCTATCTaGCAGATGGTCAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQTKFSI*QMVSPG
Trigger: GCCCGGACTGACCATCTGGCAGATAGAGAACTTCGT...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCAGCCTCGTAGAACTTaGCGTGGAAGGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFQPRRT*RGRLPP
Trigger: TGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTG...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCTCGTTGTCAAACACCTaGAGGAACTCCTCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCSLSNT*RNSSLS
Trigger: TGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAACGA...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTTCGTTGTCAAACACCTaGAGGAACTCCTCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGSLSNT*RNSSLS
Trigger: TGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAACGA...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGAAGTCTTCAGGCACGTaGTTCTTGATCTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRKSSGT*FLISEG
Trigger: GCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTT...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCACGGCCTCCGCATTaGGTGTGTAGTCCACCGTCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQARPPH*VCSPPS
Trigger: TGACGGTGGACTACACACGCAATGCGGAGGCCGTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGGCACGAAACCCTCCATaGCGTCTAGGTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: HQVVLVQDKFPQLWAPAEARNPP*RLGLRS
Trigger: GGAACGAAGACCTAGACGGCATGGAGGGTTTCGTGC...CTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCAGGCACCCAGTACCTaGAGAGGAAGACGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFQAPST*RGRRSS
Trigger: ACTGCTACGTCTTCCTCTGCAGGTACTGGGTGCCTG...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGTGGCTGCTTCTCCTCTaGCTCAGCGGTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRWLLLL*LSGCFL
Trigger: GAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCA...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCCAGAAGTACACGATaGACTGGAAGTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFARSTR*TGSPPL
Trigger: CAGAGGAGGACTTCCAGTGCATCGTGTACTTCTGGC...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGCCAGAAGTACACGATaGACTGGAAGTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRARSTR*TGSPPL
Trigger: CAGAGGAGGACTTCCAGTGCATCGTGTACTTCTGGC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGGAGGCTTCACGGCCCTaGCAGAAGTACACGATGCAC +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMREASRP*QKYTMH
Trigger: GTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTC...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCTGCTGCTGCGTCATaGGTACCACCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPAAAS*VPPPAS
Trigger: GGAAGCTGGAGGTGGTACGCATGACGCAGCAGCAGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGGTTCTCCTGCTGCTaGGTCATGCGTACCACCTCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGFSCC*VMRTTS
Trigger: GGAGGTGGTACGCATGACGCAGCAGCAGGAGAACCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAAACTTGGGGTTCTCCTaGTGCTGCGTCATGCGTACC +
Preference number: 4 (lower is better)
Translates to: GWLLGGSPGGSCSGQVSSNLGFS*CCVMRT
Trigger: GGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTT...TGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGTTCAGGATGTCTTCTaGCAACTTGGCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRAVQDVF*QLGFVR
Trigger: CCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAAC...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGTTCAGGATGTCTTCTaGCAACTTGGCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: GASHVHSHCGESWISQTPVQDVF*QLGFVR
Trigger: CCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAAC...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR GCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGGCTTCTGTGCCCCAATaGCCACCCAGAAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWASVPQ*PPRRSS
Trigger: AGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGC...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTTCTGTGCCCCAATaGCCACCCAGAAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFASVPQ*PPRRSS
Trigger: AGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGC...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVAFLSH*KVALLV
Trigger: AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: GAAAHVPWTACAGYIPGRAFLSH*KVALLV
Trigger: AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGC...CCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR GCA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGCATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGATCCTTGGACCGCATGTaGTGGATATATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERSLDRM*WIYTWQ
Trigger: CTGCCAGGTATATATCCAGCACATGCGGTCCAAGGA...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000640412.1
CDS-3UTR GCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCATCCTTGGACCGCATGTaGTGGATATATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRASLDRM*WIYTWQ
Trigger: CTGCCAGGTATATATCCAGCACATGCGGTCCAAGGA...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACGGGTAAAGGCGTGCTaGTCATTGCCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRVKAC*SLPLRT
Trigger: GGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCAGCGGGTAAAGGCGTaGTGCTCATTGCCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLQRVKA*CSLPLR
Trigger: CCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTG...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGGGGCTTCACACGTaGACTCACACTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMRGLHT*THTVER
Trigger: TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCAAGGGCATCCACATCTaGTTTATCCCTAGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCKGIHI*FIPSGR
Trigger: TCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTT...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGTCCTTGGACCGCATGTaGTGGATATATACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALSLDRM*WIYTWQ
Trigger: TTGCCAGGTATATATCCAGCACATGCGGTCCAAGGA...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS-3UTR CCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGTGGTCAGGTTGTTGTaGCTCACAGACAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGVVRLL*LTDKCS
Trigger: GGAACACTTGTCTGTGAGCCACAACAACCTGACCAC...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTGGTCAGGTTGTTGTaGCTCACAGACAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERVVRLL*LTDKCS
Trigger: GGAACACTTGTCTGTGAGCCACAACAACCTGACCAC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTGCTCCCCATGAAGCGTaGTCAGGTTGTTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFAPHEA*SGCCGS
Trigger: TGAGCCACAACAACCTGACCACGCTTCATGGGGAGC...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTAATTCTTCAGACTGTTaGCTCGGGCCACGATGGCGC +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTNSSDC*LGPRWR
Trigger: GCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATT...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCACCAGCATGTTCTTaGCGTTCTCCAGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAPACS*RSPAPA
Trigger: CGCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGAGAGCTGGTTGGGGATaGTGTCGATGCTGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: DGFWEGHQVVLVQDKFPQRAGWG*CRCCCG
Trigger: GCCACAACAGCATCGACACCATCCCCAACCAGCTCT...CTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTAGGTTGATGAAGAGCTaGTTGGGGATGGTGTCGATG +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGRLMKS*LGMVSM
Trigger: CATCGACACCATCCCCAACCAGCTCTTCATCAACCT...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: DGFWEGHQVVLVQDKFPQDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...CTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVGRVTR*FLFRTS
Trigger: ACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGAAATGGATGGCTTCTaGGAGGGTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFEMDGF*EGHQVV
Trigger: AACCACCTGGTGACCCTCCCAGAAGCCATCCATTTC...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGGAAATGGATGGCTTCTaGGAGGGTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWEMDGF*EGHQVV
Trigger: AACCACCTGGTGACCCTCCCAGAAGCCATCCATTTC...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATCTCCGTCAGGAAATaGATGGCTTCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWISVRK*MASGRV
Trigger: GACCCTCCCAGAAGCCATCCATTTCCTGACGGAGAT...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGCTTCTCCAGGCCCTaGTCCCAACGCCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVGFSRP*SQRRTF
Trigger: GAAGGTGCGGCGTTGGGACCAGGGCCTGGAGAAGCC...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGACAGGAAAACAAACCTTaGGTCCAGAGAGGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERQENKP*VQRGPL
Trigger: AAGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTG...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAACTCTGGGAGCTCCTaGCCCTGCACCAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQNSGSS*PCTSSV
Trigger: CACACTGCTGGTGCAGGGCCAGGAGCTCCCAGAGTT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCACCTTGTACAGCTTaGGCTGCGGCGGCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPPCTA*AAAARS
Trigger: ACTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACGCATCAGCTCCACCTTaGGACGCTGCTTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHASAPP*DAAYVP
Trigger: TGGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGC...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp TTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACGCATCAGCTCCACCTTaGGACGCTGCTTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: FRDRFRVSTCTHWSMHRDASAPP*DAAYVP
Trigger: TGGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGC...GTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp ACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGACAGCAGCCGCATTCTTaGCATCAGCTCCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: TRWFLFRTSFLSFGHLQRQQPHS*HQLHLG
Trigger: CCCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTG...TCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCAGCAGCCGCATTCTTaGCATCAGCTCCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRQQPHS*HQLHLG
Trigger: CCCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTG...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCTTCCTCTTGCCCCGGTaGATGATGAACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGFLLPR*MMNFLL
Trigger: CAAGAGGAAGTTCATCATCCACCGGGGCAAGAGGAA...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCTGTCTTCTGCCAACTTaGCTTCGTCAGGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVICLLPT*LRQGLM
Trigger: CATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACA...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp GGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCAGGAGGTGTCAAACATaGTGTTCAGGATGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GRVYRHSGTRVRSLQDRSRRCQT*CSGCLL
Trigger: CAGAAGACATCCTGAACACCATGTTTGACACCTCCT...GGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGAGGAGGTGTCAAACATaGTGTTCAGGATGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVRRCQT*CSGCLL
Trigger: CAGAAGACATCCTGAACACCATGTTTGACACCTCCT...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGCTGGATATATACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQCWIYT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTATATATCCAGCA...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp TTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACATTGGACCGCATGTGCTaGATATATACCTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FGTGSEFPRAPTGLCTGTLDRMC*IYTWQA
Trigger: GGCCTGCCAGGTATATATCCAGCACATGCGGTCCAA...TGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGTTGGACCGCATGTGCTaGATATATACCTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWLDRMC*IYTWQA
Trigger: GGCCTGCCAGGTATATATCCAGCACATGCGGTCCAA...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATAT +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAAAHVP*TACAGY
Trigger: ATATCCAGCACATGCGGTCCAAGGAACATGAGCGGC...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCAGGGTCATCCCCATTaGTGCTGCTTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTQGHPH*CCLRLL
Trigger: CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTG...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGCACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
3UTR CAA 72 bp CTCCAGCTTCCCAGGGAAGAGGCTCTCGAACTTCTTTaGCAGGCTGAAGGTGAAGGTGAGCCAGCCCATATT +
Preference number: 4 (lower is better)
Translates to: LQLPREEALELL*QAEGEGEPAHI
Trigger: AATATGGGCTGGCTCACCTTCACCTTCAGCCTGCAAAAGAAGTTCGAGAGCCTCTTCCCTGGGAAGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACGGCTGGTCATGGCCTTaGCATTCTCAGGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHGWSWP*HSQGSS
Trigger: GCTACTTCCCTGAGAATGTCAAGGCCATGACCAGCC...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACTGGACAGCTCCCCATaGAGCGTGGTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLDSSP*SVVRLL
Trigger: CAACAACCTGACCACGCTTCATGGGGAGCTGTCCAG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCAGAGATCATCTAGCTTaGAGATGTCATCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPRDHLA*RCHRGL
Trigger: GAGTCCCCGATGACATCTTCAAGCTAGATGATCTCT...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGAGATCATCTAGCTTaGAGATGTCATCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGRDHLA*RCHRGL
Trigger: GAGTCCCCGATGACATCTTCAAGCTAGATGATCTCT...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGAGAGATCATCTAGCTTaGAGATGTCATCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRRDHLA*RCHRGL
Trigger: GAGTCCCCGATGACATCTTCAAGCTAGATGATCTCT...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCAGAGATCATCTAGCTTaGAGATGTCATCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIRDHLA*RCHRGL
Trigger: GAGTCCCCGATGACATCTTCAAGCTAGATGATCTCT...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAAGAGATCATCTAGCTTaGAGATGTCATCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERRDHLA*RCHRGL
Trigger: GAGTCCCCGATGACATCTTCAAGCTAGATGATCTCT...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCAGGCGGTTCTCGCTaGGGTCCAGGTATAGTAGGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPGGSR*GPGIVG
Trigger: ACCTACTATACCTGGACCTCAGCGAGAACCGCCTGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACTGAGGGCAGTGAGGTaGGCTGATTTCGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLRAVR*ADFGTG
Trigger: ACCTGTCCCGAAATCAGCTCACCTCACTGCCCTCAG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACTCTTCCAGGTTGGTaGGCTTGCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHTLPGW*ACQCLR
Trigger: CCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGT...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTCTGGTCATCCTGGGCTaGATCCTTGCGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVLVILG*ILAPPQ
Trigger: CTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAG...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACTCCTGGGCAACATCTaGCATGCCCTTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLLGNI*HALQHL
Trigger: CAGGTGCTGAAGGGCATGTCAGATGTTGCCCAGGAG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp CTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGGGCCCACGTCCTCCGTaGAGAACTCGGAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: LGKSRSISQSLQSSPSRWGPRPP*RTRSSQ
Trigger: TTGACTACTCCGAGTTCTTCACGGAGGACGTGGGCC...CCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGCCCACGTCCTCCGTaGAGAACTCGGAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGPRPP*RTRSSQ
Trigger: TTGACTACTCCGAGTTCTTCACGGAGGACGTGGGCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCATCCAGAAAGGTCTTaGGCACAATGTAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRHPERS*AQCSSQ
Trigger: CTGACTGCTACATTGTGCTCAAGACCTTTCTGGATG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTCATCCAGAAAGGTCTTaGGCACAATGTAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILHPERS*AQCSSQ
Trigger: CTGACTGCTACATTGTGCTCAAGACCTTTCTGGATG...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTCATCCAGAAAGGTCTTaGGCACAATGTAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: HPLVYAQGQLRDLVAAEVHPERS*AQCSSQ
Trigger: CTGACTGCTACATTGTGCTCAAGACCTTTCTGGATG...AACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCAGAAAGGTCTTaGGCACAATGTAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGHPERS*AQCSSQ
Trigger: CTGACTGCTACATTGTGCTCAAGACCTTTCTGGATG...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGAGTAGATCTCCCAGTTaGGGGAGCCGCTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRSRSPS*GSRCHP
Trigger: TGGATGACAGCGGCTCCCTCAACTGGGAGATCTACT...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGTAGTTGCGCAAGTTaGCAGCGTGGATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGSCAS*QRGWQS
Trigger: GCTCTGCCATCCACGCTGTCAACTTGCGCAACTACC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCCACGATACATCCTGGTaGCATAGTGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGHDTSW*HSVCLP
Trigger: TGGAAGACACACACTATGTCACCAGGATGTATCGTG...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACACGATACATCCTGGTaGCATAGTGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: HTCTHTVERVGFPRPLRAHDTSW*HSVCLP
Trigger: TGGAAGACACACACTATGTCACCAGGATGTATCGTG...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCCACGATACATCCTGGTaGCATAGTGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVHDTSW*HSVCLP
Trigger: TGGAAGACACACACTATGTCACCAGGATGTATCGTG...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCACAGGCTCCAACTTaGTGTTCTTTTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAAQAPT*CSFSHT
Trigger: TGTATGGGAAAAAGAACATCAAGTTGGAGCCTGTGC...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGCACAGGCTCCAACTTaGTGTTCTTTTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: GESWISQTPEGTCQGHPHAQAPT*CSFSHT
Trigger: TGTATGGGAAAAAGAACATCAAGTTGGAGCCTGTGC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCTGCACCAGCAGTGTaGTCTCAGCCTTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPAPAV*SQPSLS
Trigger: GGAAAGGGAAGGCTGAGATCACACTGCTGGTGCAGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp CTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGAGCAGAACTCGGAGTTaGGGAGGCTGGAGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: LGKSRSISQSLQSSPSRWSRTRS*GGWSRC
Trigger: ACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCT...CCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGCAGAACTCGGAGTTaGGGAGGCTGGAGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSRTRS*GGWSRC
Trigger: ACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR TCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCAGGTGGTGTCACCTaGGTACATTCTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFAGGVT*VHSLLA
Trigger: TGCTAGCAAAGAATGTACTCAGGTGACACCACCTGC...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATGCCGGAGCTGTGCATaGAGCAGGGGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQCRSCA*SRGFPL
Trigger: CAATGGAAACCCCCTGCTGCATGCACAGCTCCGGCA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTTTCAGAGTTTCCACGTaGACCCACTGGTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFFRVST*THWSMH
Trigger: GTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAA...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGTCAGCTTGCTCAGCTTaGAAATGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMSACSA*KWLRAV
Trigger: CACTGCCCTCAGCCATTTGCAAGCTGAGCAAGCTGA...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTTCAGCTTGCTCAGCTTaGAAATGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFSACSA*KWLRAV
Trigger: CACTGCCCTCAGCCATTTGCAAGCTGAGCAAGCTGA...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGTCAGCTTGCTCAGCTTaGAAATGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: DGFWEGHQVVLVQDKFPQSACSA*KWLRAV
Trigger: CACTGCCCTCAGCCATTTGCAAGCTGAGCAAGCTGA...CTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTTCAGCTTGCTCAGCTTaGAAATGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTSACSA*KWLRAV
Trigger: CACTGCCCTCAGCCATTTGCAAGCTGAGCAAGCTGA...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGTCAGCTTTGGGCACCTaGAGAGACTTTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMSALGT*RDFQGP
Trigger: TGGTCCCTGAAAGTCTCTGCAGGTGCCCAAAGCTGA...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGTCAGCTTTGGGCACCTaGAGAGACTTTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: HQVVLVQDKFPQLWAPAESALGT*RDFQGP
Trigger: TGGTCCCTGAAAGTCTCTGCAGGTGCCCAAAGCTGA...CTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGTCAGCTTTGGGCACCTaGAGAGACTTTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: DGFWEGHQVVLVQDKFPQSALGT*RDFQGP
Trigger: TGGTCCCTGAAAGTCTCTGCAGGTGCCCAAAGCTGA...CTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAATGCCCTTCAGCACCTaGTTGGCCTGGTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQMPFST*LAWSSW
Trigger: CCAGGATGACCAGGCCAAGCAGGTGCTGAAGGGCAT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTTCTGCGCTCTCCTCCTaGTTTTTGTTCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFASALSS*FLFFSW
Trigger: CCAGGAGAAGAACAAAAAGCAGGAGGAGAGCGCAGA...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTACGAAGTTCTCTATCTaGCAGATGGTCAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTTKFSI*QMVSPG
Trigger: GCCCGGACTGACCATCTGGCAGATAGAGAACTTCGT...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCACGAAGTTCTCTATCTaGCAGATGGTCAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: QVVVGSHELFQVGELANATKFSI*QMVSPG
Trigger: GCCCGGACTGACCATCTGGCAGATAGAGAACTTCGT...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTAAGTCTTCAGGCACGTaGTTCTTGATCTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFKSSGT*FLISEG
Trigger: GCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTT...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGTGTCCAGCAGACTCTaGAGCAGCCGCATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQVSSRL*SSRILG
Trigger: GCCAAGAATGCGGCTGCTGCAGAGTCTGCTGGACAC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCCGCGCAAACTTCTTaGCCTCCAGCACGAAACCCT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAAQTS*PPARNP
Trigger: AGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACTTCCTCGCCTTCTTTaGCCTCGGCCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLPRLL*PRPSPP
Trigger: AGGAGGAGAAGGCCGAGGGCAAAGAAGGCGAGGAAG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACTCTGCCTCAGCGGTTaGTTCCTCGCCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLCLSG*FLAFFA
Trigger: GGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATGGCTGCTTCTCCTCTaGCTCAGCGGTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQWLLLL*LSGCFL
Trigger: GAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCCA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAAGTCCTCCTCTGGCTaGTTCTCCTCTGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQKSSSG*FSSASA
Trigger: CGCTGAGGCAGAGGAGAAGCAGCCAGAGGAGGACTT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGAGGCTTCACGGCCCTaGCAGAAGTACACGATGCAC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQEASRP*QKYTMH
Trigger: GTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATTGGGGTTCTCCTGCTaGTGCGTCATGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLGFSC*CVMRTT
Trigger: GGTGGTACGCATGACGCAGCAGCAGGAGAACCCCAA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGGTTCAGGATGTCTTCTaGCAACTTGGCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWVQDVF*QLGFVR
Trigger: CCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAAC...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTAFLSH*KVALLV
Trigger: AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGC...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTCATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTCATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCCATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGTCCTTGGACCGCATGTaGTGGATATATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVSLDRM*WIYTWQ
Trigger: CTGCCAGGTATATATCCAGCACATGCGGTCCAAGGA...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000640412.1
CDS-3UTR GCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAAGGGCATCCACATCTaGTTTATCCCTAGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVKGIHI*FIPSGR
Trigger: TCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTT...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGAAGGGCATCCACATCTaGTTTATCCCTAGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRKGIHI*FIPSGR
Trigger: TCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTT...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR GCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCTCCTTGGACCGCATGTaGTGGATATATACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASSLDRM*WIYTWQ
Trigger: TTGCCAGGTATATATCCAGCACATGCGGTCCAAGGA...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS-3UTR GCA 90 bp GCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCATCAGCTTGCTCAGCTTaGAAATGGCTGATGGTCTAT +
Preference number: 4 (lower is better)
Translates to: AMNSSRLVSLPMPEGSPSSACSA*KWLMVY
Trigger: ATAGACCATCAGCCATTTGCAAGCTGAGCAAGCTGA...TGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577626.1
ENST00000638796.1
CDS-3UTR GCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGTTGGAGCACCTGCTTaGTGTAGGAGGTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFVGAPA*CRRCQT
Trigger: TGTTTGACACCTCCTACAGCAAGCAGGTGCTCCAAC...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
CDS-3UTR CCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGTGGTCAGGTTGTTGTaGCTCACAGACAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVVVRLL*LTDKCS
Trigger: GGAACACTTGTCTGTGAGCCACAACAACCTGACCAC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGGTGGTCAGGTTGTTGTaGCTCACAGACAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWVVRLL*LTDKCS
Trigger: GGAACACTTGTCTGTGAGCCACAACAACCTGACCAC...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGAATTCTTCAGACTGTTaGCTCGGGCCACGATGGCGC +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRNSSDC*LGPRWR
Trigger: GCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATT...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTAGGTTGATGAAGAGCTaGTTGGGGATGGTGTCGATG +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFRLMKS*LGMVSM
Trigger: CATCGACACCATCCCCAACCAGCTCTTCATCAACCT...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGGTTGATGAAGAGCTaGTTGGGGATGGTGTCGATG +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFARLMKS*LGMVSM
Trigger: CATCGACACCATCCCCAACCAGCTCTTCATCAACCT...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000638207.2
ENST00000639036.1
CDS-3UTR CCA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTCAAAGTCCAGCTTGTTaGAATTCAGGTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAQSPAC*NSGTAS
Trigger: AGAAGCTGTACCTGAATTCCAACAAGCTGGACTTTG...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGACGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: PGGSCSGQVSSALGTCRDGRVTR*FLFRTS
Trigger: ACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCC...GTCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFGRVTR*FLFRTS
Trigger: ACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCC...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGAAATGGATGGCTTCTaGGAGGGTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTEMDGF*EGHQVV
Trigger: AACCACCTGGTGACCCTCCCAGAAGCCATCCATTTC...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCGAAATGGATGGCTTCTaGGAGGGTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: QVVVGSHELFQVGELANAEMDGF*EGHQVV
Trigger: AACCACCTGGTGACCCTCCCAGAAGCCATCCATTTC...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATTGGCCTGGTCATCCTaGGCTGAATCCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLAWSS*AESLRL
Trigger: GAGGCGCAAGGATTCAGCCCAGGATGACCAGGCCAA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGCACCTGCTTGGCCTaGTCATCCTGGGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSTCLA*SSWAES
Trigger: GGATTCAGCCCAGGATGACCAGGCCAAGCAGGTGCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCTCTATCTGCCAGATaGTCAGTCCGGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSLSAR*SVRAAG
Trigger: GCCAGCTGCCCGGACTGACCATCTGGCAGATAGAGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCTTTCTTGTCGAGTGTaGCCTCCCCGCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRLSCRV*PPRQSS
Trigger: ACTGGATTGGCGGGGAGGCCACACTCGACAAGAAAG...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACAAAGAGCCTGGCCTTaGTGGTGCTGCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQQRAWP*WCCSVW
Trigger: CCACACTGAGCAGCACCACCAAGGCCAGGCTCTTTG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACAGCAGCCGCATTCTTaGCATCAGCTCCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQQQPHS*HQLHLG
Trigger: CCCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGTCAGCCTTCATCTaGTCTTTCTTCTCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMRSAFI*SFFSAS
Trigger: CGACGCCGAGAAGAAAGACCAGATGAAGGCTGACCT...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGAATGGGACAGGAACTTaGGGTTCTCCTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRNGTGT*GSPAAA
Trigger: CGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATT...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGAGTCGGTGTTGATCTaGATGCACCGGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQESVLI*MHRVQR
Trigger: CCTCTGCACCCGGTGCATCCAGATCAACACCGACTC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACGCATACACGATGCCCTaGTTGTCCTCACTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHAYTMP*LSSLSK
Trigger: CTTTGAGAGTGAGGACAACCAGGGCATCGTGTATGC...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR CCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGTGTCTTCTGCCAACTTaGCTTCGTCAGGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPECLLPT*LRQGLM
Trigger: CATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACA...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR CCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGATGTCTTCTGCCAACTTaGCTTCGTCAGGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRCLLPT*LRQGLM
Trigger: CATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACA...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR CCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCAGGAGGTGTCAAACATaGTGTTCAGGATGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPRRCQT*CSGCLL
Trigger: CAGAAGACATCCTGAACACCATGTTTGACACCTCCT...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR CCA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCTCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVSARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTTCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGSARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCTCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASSARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGCTTGATCTCCACCTaGCTAGTCTGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSLIST*LVWVPT
Trigger: GGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GGTGAGCTGATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATTGCTGGATATATACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GELISGQVQSFHVHPLVYCWIYT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTATATATCCAGCA...ATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAATCAGCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTTTGGACCGCATGTGCTaGATATATACCTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTLDRMC*IYTWQA
Trigger: GGCCTGCCAGGTATATATCCAGCACATGCGGTCCAA...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATAT +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMAAHVP*TACAGY
Trigger: ATATCCAGCACATGCGGTCCAAGGAACATGAGCGGC...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
3UTR CAA 72 bp AAATGGATGGCTTCTGGGAGGGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: KWMASGRVTRWF*FRTSFLSFGHL
Trigger: CAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 72 bp TGGATGATGAACTTCCTCTTGAAATGGGACAGGAACTaGGGGTTCTCCTGCTGCTGCGTCATGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: WMMNFLLKWDRN*GFSCCCVMRTT
Trigger: GGTGGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
3UTR CAA 72 bp TCAAAGGGAACCTTGAGGATGAAGCAGAACTCGGAGTaGAGGAGGCTGGAGTCGGTGTTGATCTGGATGCAC +
Preference number: 4 (lower is better)
Translates to: SKGTLRMKQNSE*RRLESVLIWMH
Trigger: GTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCTTCATCCTCAAGGTTCCCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGCTGGTCATGGCCTTaGCATTCTCAGGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGWSWP*HSQGSS
Trigger: GCTACTTCCCTGAGAATGTCAAGGCCATGACCAGCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGSEVS*FRDRFR
Trigger: TCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTACTCTTCCAGGTTGGTaGGCTTGCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLTLPGW*ACQCLR
Trigger: CCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGT...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAACTCTTCCAGGTTGGTaGGCTTGCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQTLPGW*ACQCLR
Trigger: CCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGTAGATCTCCCAGTTaGGGGAGCCGCTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSRSPS*GSRCHP
Trigger: TGGATGACAGCGGCTCCCTCAACTGGGAGATCTACT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACCACGATACATCCTGGTaGCATAGTGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHHDTSW*HSVCLP
Trigger: TGGAAGACACACACTATGTCACCAGGATGTATCGTG...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGCACGATACATCCTGGTaGCATAGTGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVHDTSW*HSVCLP
Trigger: TGGAAGACACACACTATGTCACCAGGATGTATCGTG...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR TCA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGCACAGGCTCCAACTTaGTGTTCTTTTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: THTVERVGFPRPLRAPVRAQAPT*CSFSHT
Trigger: TGTATGGGAAAAAGAACATCAAGTTGGAGCCTGTGC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTGCACAGGCTCCAACTTaGTGTTCTTTTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILAQAPT*CSFSHT
Trigger: TGTATGGGAAAAAGAACATCAAGTTGGAGCCTGTGC...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCAGGAAAAGCGCAGTaGGGTCAGCCTTCATCTGGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAGKAQ*GQPSSG
Trigger: ACCAGATGAAGGCTGACCTCACTGCGCTTTTCCTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCCGTGTCAGGTCATTaGAGGACAGATCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPVSGH*RTDPRL
Trigger: CAGACGTGGATCTGTCCTGCAATGACCTGACACGGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp GCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTTCAGCTTTGGGCACCTaGAGAGACTTTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: ASGRVTRWFLFRTSFLSFSALGT*RDFQGP
Trigger: TGGTCCCTGAAAGTCTCTGCAGGTGCCCAAAGCTGA...AAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGGCAACATCTGACATaGCCTTCAGCACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGQHLT*PSAPAW
Trigger: CCAAGCAGGTGCTGAAGGGCATGTCAGATGTTGCCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTTCTGCGCTCTCCTCCTaGTTTTTGTTCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTSALSS*FLFFSW
Trigger: CCAGGAGAAGAACAAAAAGCAGGAGGAGAGCGCAGA...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGAAGTTCTCTATCTaGCAGATGGTCAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHTKFSI*QMVSPG
Trigger: GCCCGGACTGACCATCTGGCAGATAGAGAACTTCGT...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACAGCCTCGTAGAACTTaGCGTGGAAGGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQQPRRT*RGRLPP
Trigger: TGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTTCGTTGTCAAACACCTaGAGGAACTCCTCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTSLSNT*RNSSLS
Trigger: TGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAACGA...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTAAGTCTTCAGGCACGTaGTTCTTGATCTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTKSSGT*FLISEG
Trigger: GCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTT...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATTGTACAGCTTGGGCTaGGGCGGCCAGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLYSLG*GGQKSS
Trigger: TGAAGACTTCTGGCCGCCGCAGCCCAAGCTGTACAA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCCACCTTGGGACGCTaGTTATGTTCCACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSTLGR*LCSTES
Trigger: GCTCTCCGTGGAACATAAGCAGCGTCCCAAGGTGGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATTTCTCAGTGCACGGCCTCCGCATTaGGTGTGTAGTCCACCGTCA +
Preference number: 4 (lower is better)
Translates to: HDVIICQVILAKVGAFLSARPPH*VCSPPS
Trigger: TGACGGTGGACTACACACGCAATGCGGAGGCCGTGC...ACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCACGAAACCCTCCATaGCGTCTAGGTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQARNPP*RLGLRS
Trigger: GGAACGAAGACCTAGACGGCATGGAGGGTTTCGTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACAGGCACCCAGTACCTaGAGAGGAAGACGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQQAPST*RGRRSS
Trigger: ACTGCTACGTCTTCCTCTGCAGGTACTGGGTGCCTG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp CCATTGTCTAGCAACATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGGGTTCTCCTGCTGCTaGGTCATGCGTACCACCTCC +
Preference number: 4 (lower is better)
Translates to: PLSSNMMSSSARSSWQKSGFSCC*VMRTTS
Trigger: GGAGGTGGTACGCATGACGCAGCAGCAGGAGAACCC...CGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAACTTGGGGTTCTCCTaGTGCTGCGTCATGCGTACC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQNLGFS*CCVMRT
Trigger: GGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIAFLSH*KVALLV
Trigger: AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGC...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGAAGGGCATCCACATCTaGTTTATCCCTAGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPEKGIHI*FIPSGR
Trigger: TCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTT...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCTCCCCATGAAGCGTaGTCAGGTTGTTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAPHEA*SGCCGS
Trigger: TGAGCCACAACAACCTGACCACGCTTCATGGGGAGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAATTCTTCAGACTGTTaGCTCGGGCCACGATGGCGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQNSSDC*LGPRWR
Trigger: GCGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGAGCTGGTTGGGGATaGTGTCGATGCTGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRAGWG*CRCCCG
Trigger: GCCACAACAGCATCGACACCATCCCCAACCAGCTCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCCAAAGTCCAGCTTGTTaGAATTCAGGTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GGFTRALTLWRELDFPDPQSPAC*NSGTAS
Trigger: AGAAGCTGTACCTGAATTCCAACAAGCTGGACTTTG...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCAAAGTCCAGCTTGTTaGAATTCAGGTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAQSPAC*NSGTAS
Trigger: AGAAGCTGTACCTGAATTCCAACAAGCTGGACTTTG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHGRVTR*FLFRTS
Trigger: ACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCC...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACGAAATGGATGGCTTCTaGGAGGGTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHEMDGF*EGHQVV
Trigger: AACCACCTGGTGACCCTCCCAGAAGCCATCCATTTC...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCGTCAGGAAATGGATaGCTTCTGGGAGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPSGNG*LLGGSP
Trigger: TGGTGACCCTCCCAGAAGCCATCCATTTCCTGACGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACATCTCCGTCAGGAAATaGATGGCTTCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHISVRK*MASGRV
Trigger: GACCCTCCCAGAAGCCATCCATTTCCTGACGGAGAT...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACTTTCTTGTCGAGTGTaGCCTCCCCGCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLSCRV*PPRQSS
Trigger: ACTGGATTGGCGGGGAGGCCACACTCGACAAGAAAG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACCGCAAGTTGACAGCGTaGATGGCAGAGCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHRKLTA*MAEQAF
Trigger: GAAAGCTTGCTCTGCCATCCACGCTGTCAACTTGCG...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCTCTGCAAAGAGCCTaGCCTTGGTGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSLQRA*PWWCCS
Trigger: TGAGCAGCACCACCAAGGCCAGGCTCTTTGCAGAGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAATGGGACAGGAACTTaGGGTTCTCCTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQNGTGT*GSPAAA
Trigger: CGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTAACTTCCTCTTGAAATaGGACAGGAACTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGNFLLK*DRNLGF
Trigger: GAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGTTCCTCTTGCCCCGGTaGATGATGAACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMFLLPR*MMNFLL
Trigger: CAAGAGGAAGTTCATCATCCACCGGGGCAAGAGGAA...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGTGTCTTCTGCCAACTTaGCTTCGTCAGGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMCLLPT*LRQGLM
Trigger: CATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACA...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTAGGAGGTGTCAAACATaGTGTTCAGGATGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGRRCQT*CSGCLL
Trigger: CAGAAGACATCCTGAACACCATGTTTGACACCTCCT...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGGAGGTGTCAAACATaGTGTTCAGGATGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SHVHSHCGESWISQTPEGRRCQT*CSGCLL
Trigger: CAGAAGACATCCTGAACACCATGTTTGACACCTCCT...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGTAGCCCTTCTCGTTaGAGCACCGGAAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSSPSR*STGRDV
Trigger: CACGTCTCTTCCGGTGCTCCAACGAGAAGGGCTACT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGTCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWSARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGATCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRSARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGTCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: ASHVHSHCGESWISQTPESARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACCACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CCA 90 bp GCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTCACTGTGGAGAGAGTTaGATTTCCCAGACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: ASGRVTRWFLFRTSFLSFHCGES*ISQTPE
Trigger: CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTG...AAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCACAGGCTCCAACTTaGTGTTCTTTTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFAQAPT*CSFSHT
Trigger: TGTATGGGAAAAAGAACATCAAGTTGGAGCCTGTGC...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR TCA 90 bp CCATTGTCTAGCAACATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGCTAGCAGACAGTGGATaGGGCCCCTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PLSSNMMSSSARSSWQKSLADSG*GPFLFL
Trigger: GAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAG...CGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR GCA 90 bp CCATTGTCTAGCAACATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGGACAGATCCACGTCTaGGAGGTTGCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: PLSSNMMSSSARSSWQKSGQIHV*EVAQTL
Trigger: GAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCC...CGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCAGCTTGCTCAGCTTaGAAATGGCTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSACSA*KWLRAV
Trigger: CACTGCCCTCAGCCATTTGCAAGCTGAGCAAGCTGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCAGCTTTGGGCACCTaGAGAGACTTTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSALGT*RDFQGP
Trigger: TGGTCCCTGAAAGTCTCTGCAGGTGCCCAAAGCTGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAACGAAGTTCTCTATCTaGCAGATGGTCAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQTKFSI*QMVSPG
Trigger: GCCCGGACTGACCATCTGGCAGATAGAGAACTTCGT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCCAGAAGTACACGATaGACTGGAAGTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQARSTR*TGSPPL
Trigger: CAGAGGAGGACTTCCAGTGCATCGTGTACTTCTGGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCTTCTGTGCCCCAATaGCCACCCAGAAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQASVPQ*PPRRSS
Trigger: AGAACTTCTTCTGGGTGGGCATTGGGGCACAGAAGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVAFLSH*KVALLV
Trigger: AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAAFLSH*KVALLV
Trigger: AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGC...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRAFLSH*KVALLV
Trigger: AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACTCCTTGGACCGCATGTaGTGGATATATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHSLDRM*WIYTWQ
Trigger: CTGCCAGGTATATATCCAGCACATGCGGTCCAAGGA...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000640412.1
CDS-3UTR CCA 90 bp AGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTAGGTTGATGAAGAGCTaGTTGGGGATGGTGTCGATG +
Preference number: 4 (lower is better)
Translates to: RLLLAAMNSSRLVSLPMPRLMKS*LGMVSM
Trigger: CATCGACACCATCCCCAACCAGCTCTTCATCAACCT...AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCAAAGTCCAGCTTGTTaGAATTCAGGTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SHCGESWISQTPEGTCQGQSPAC*NSGTAS
Trigger: AGAAGCTGTACCTGAATTCCAACAAGCTGGACTTTG...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCAAAGTCCAGCTTGTTaGAATTCAGGTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPQSPAC*NSGTAS
Trigger: AGAAGCTGTACCTGAATTCCAACAAGCTGGACTTTG...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CCA 90 bp AACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAAGTCCCAAAGTCCAGCTTGTTaGAATTCAGGTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: NSSRLVSLPMPEGSPSKSQSPAC*NSGTAS
Trigger: AGAAGCTGTACCTGAATTCCAACAAGCTGGACTTTG...GGACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGGAGGGTCACCAGGTaGTTCTTGTTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGRVTR*FLFRTS
Trigger: ACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGAAATGGATGGCTTCTaGGAGGGTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQEMDGF*EGHQVV
Trigger: AACCACCTGGTGACCCTCCCAGAAGCCATCCATTTC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAATCTCCGTCAGGAAATaGATGGCTTCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQISVRK*MASGRV
Trigger: GACCCTCCCAGAAGCCATCCATTTCCTGACGGAGAT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACGCAAGTTGACAGCGTaGATGGCAGAGCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRKLTA*MAEQAF
Trigger: GAAAGCTTGCTCTGCCATCCACGCTGTCAACTTGCG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCAGGAAAACAAACCTTaGGTCCAGAGAGGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRQENKP*VQRGPL
Trigger: AAGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTG...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCATCAGCTCCACCTTaGGACGCTGCTTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQASAPP*DAAYVP
Trigger: TGGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGGTCAGCCTTCATCTaGTCTTTCTTCTCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRSAFI*SFFSAS
Trigger: CGACGCCGAGAAGAAAGACCAGATGAAGGCTGACCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAAGTACACGATGCACTaGAAGTCCTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQKYTMH*KSSSGC
Trigger: GCAGCCAGAGGAGGACTTCCAGTGCATCGTGTACTT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGAACTTCCTCTTGAAATaGGACAGGAACTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWNFLLK*DRNLGF
Trigger: GAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTT...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TACACGATGCCCTGGTTGTCCTCACTCTCAAAGGGAACCTTGAGGATGAAGCAGTTCCTCTTGCCCCGGTaGATGATGAACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: YTMPWLSSLSKGTLRMKQFLLPR*MMNFLL
Trigger: CAAGAGGAAGTTCATCATCCACCGGGGCAAGAGGAA...CTGCTTCATCCTCAAGGTTCCCTTTGAGAGTGAGGACAACCAGGGCATCGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp AGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGAGCACCGGAAGAGACGCATACACGATGCCCTaGTTGTCCTCACTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SISQSLQSSPSRWSTGRDAYTMP*LSSLSK
Trigger: CTTTGAGAGTGAGGACAACCAGGGCATCGTGTATGC...GTCTCTTCCGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGAGGAGGTGTCAAACATaGTGTTCAGGATGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVRRCQT*CSGCLL
Trigger: CAGAAGACATCCTGAACACCATGTTTGACACCTCCT...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR CCA 90 bp CCCTTTCCGCTCATTCTTGTTAATTTTCTCTGCAAAGAGCCTGGCCTTGGTGGTAGTAGCCCTTCTCGTTaGAGCACCGGAAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: PFPLILVNFLCKEPGLGGSSPSR*STGRDV
Trigger: CACGTCTCTTCCGGTGCTCCAACGAGAAGGGCTACT...ACCACCAAGGCCAGGCTCTTTGCAGAGAAAATTAACAAGAATGAGCGGAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGTCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMSARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATGCTGGATATATACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQCWIYT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTATATATCCAGCA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTTGCTGGATATATACCTaGCAGGCCTTCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLCWIYT*QAFRLS
Trigger: GCTGAGCCTGAAGGCCTGCCAGGTATATATCCAGCA...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATTGGACCGCATGTGCTaGATATATACCTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLDRMC*IYTWQA
Trigger: GGCCTGCCAGGTATATATCCAGCACATGCGGTCCAA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATAT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAAHVP*TACAGY
Trigger: ATATCCAGCACATGCGGTCCAAGGAACATGAGCGGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GTAGTCCACCGTCAACACATCGTCCCAATTCTTGAACTTGGCCTTGAACACCTGGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATAT +
Preference number: 4 (lower is better)
Translates to: VVHRQHIVPILELGLEHLAAHVP*TACAGY
Trigger: ATATCCAGCACATGCGGTCCAAGGAACATGAGCGGC...CAGGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGTGTTGACGGTGGACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp CCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGACTGCTCAGCTTGCAAATaGCTGATGGTCTATGCACAG +
Preference number: 4 (lower is better)
Translates to: PGGSCSGQVSSALGTCRDCSACK*LMVYAQ
Trigger: CTGTGCATAGACCATCAGCCATTTGCAAGCTGAGCA...GTCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577626.1
ENST00000638796.1
CDS-3UTR CCA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGCTCAGCTTGCAAATaGCTGATGGTCTATGCACAG +
Preference number: 4 (lower is better)
Translates to: QVVVGSHELFQVGELANACSACK*LMVYAQ
Trigger: CTGTGCATAGACCATCAGCCATTTGCAAGCTGAGCA...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577626.1
ENST00000638796.1
3UTR CAA 72 bp AGGTATAGTAGGTCAGTGAGGTTGATGAAGAGCTGGTaGGGGATGGTGTCGATGCTGTTGTGGCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: RYSRSVRLMKSW*GMVSMLLWLRF
Trigger: GAACCTCAGCCACAACAGCATCGACACCATCCCCAACCAGCTCTTCATCAACCTCACTGACCTACTATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGAGAGATCATCTAGCTTaGAGATGTCATCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRRDHLA*RCHRGL
Trigger: GAGTCCCCGATGACATCTTCAAGCTAGATGATCTCT...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR TCA 90 bp CTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGGCAGGTGGTGTCACCTaGGTACATTCTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: LGKSRSISQSLQSSPSRWAGGVT*VHSLLA
Trigger: TGCTAGCAAAGAATGTACTCAGGTGACACCACCTGC...CCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATTCAGAGTTTCCACGTaGACCCACTGGTCTATGCAC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQFRVST*THWSMH
Trigger: GTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCTGCGCTCTCCTCCTaGTTTTTGTTCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSALSS*FLFFSW
Trigger: CCAGGAGAAGAACAAAAAGCAGGAGGAGAGCGCAGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCGTTGTCAAACACCTaGAGGAACTCCTCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSLSNT*RNSSLS
Trigger: TGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAACGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAAGTCTTCAGGCACGTaGTTCTTGATCTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQKSSGT*FLISEG
Trigger: GCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGTTCAGGATGTCTTCTaGCAACTTGGCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQVQDVF*QLGFVR
Trigger: CCTGACGAAGCCAAGTTGGCAGAAGACATCCTGAAC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMAFLSH*KVALLV
Trigger: AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGC...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTAFLSH*KVALLV
Trigger: AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGC...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGCATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGCATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTCATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCCTTGGACCGCATGTaGTGGATATATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSLDRM*WIYTWQ
Trigger: CTGCCAGGTATATATCCAGCACATGCGGTCCAAGGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000640412.1
CDS-3UTR GCA 90 bp CCATTGTCTAGCAACATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGAGGGGGCTTCACACGTaGACTCACACTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PLSSNMMSSSARSSWQKSRGLHT*THTVER
Trigger: TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT...CGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
CDS-3UTR GCA 90 bp GTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGTCAGCTTGCTCAGCTTaGAAATGGCTGATGGTCTAT +
Preference number: 4 (lower is better)
Translates to: VTRWFLFRTSFLSFGHLQSACSA*KWLMVY
Trigger: ATAGACCATCAGCCATTTGCAAGCTGAGCAAGCTGA...CTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577626.1
ENST00000638796.1
CDS-3UTR GCA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTGTTGGAGCACCTGCTTaGTGTAGGAGGTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLVGAPA*CRRCQT
Trigger: TGTTTGACACCTCCTACAGCAAGCAGGTGCTCCAAC...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGTGGTCAGGTTGTTGTaGCTCACAGACAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQVVRLL*LTDKCS
Trigger: GGAACACTTGTCTGTGAGCCACAACAACCTGACCAC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGGTTGATGAAGAGCTaGTTGGGGATGGTGTCGATG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRLMKS*LGMVSM
Trigger: CATCGACACCATCCCCAACCAGCTCTTCATCAACCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGACAGCTCCGTGATCTaGTTGCTGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVDSSVI*LLLRLR
Trigger: CCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTC...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCCAAAGTCCAGCTTGTTaGAATTCAGGTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGQSPAC*NSGTAS
Trigger: AGAAGCTGTACCTGAATTCCAACAAGCTGGACTTTG...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACAGGAAAACAAACCTTaGGTCCAGAGAGGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQQENKP*VQRGPL
Trigger: AAGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGCAGGAAAACAAACCTTaGGTCCAGAGAGGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LGKSRSISQSLQSSPSRWQENKP*VQRGPL
Trigger: AAGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTG...CCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAACTTCCTCTTGAAATaGGACAGGAACTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMNFLLK*DRNLGF
Trigger: GAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTT...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATTCCTCTTGCCCCGGTaGATGATGAACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQFLLPR*MMNFLL
Trigger: CAAGAGGAAGTTCATCATCCACCGGGGCAAGAGGAA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp CTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGTTCCTCTTGCCCCGGTaGATGATGAACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LGKSRSISQSLQSSPSRWFLLPR*MMNFLL
Trigger: CAAGAGGAAGTTCATCATCCACCGGGGCAAGAGGAA...CCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCATACACGATGCCCTaGTTGTCCTCACTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAYTMP*LSSLSK
Trigger: CTTTGAGAGTGAGGACAACCAGGGCATCGTGTATGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATGTCTTCTGCCAACTTaGCTTCGTCAGGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQCLLPT*LRQGLM
Trigger: CATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGAGATCATCTAGCTTaGAGATGTCATCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRDHLA*RCHRGL
Trigger: GAGTCCCCGATGACATCTTCAAGCTAGATGATCTCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACATCCAGAAAGGTCTTaGGCACAATGTAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQHPERS*AQCSSQ
Trigger: CTGACTGCTACATTGTGCTCAAGACCTTTCTGGATG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACACGATACATCCTGGTaGCATAGTGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQHDTSW*HSVCLP
Trigger: TGGAAGACACACACTATGTCACCAGGATGTATCGTG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGCACAGGCTCCAACTTaGTGTTCTTTTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: ASGRVTRWFLFRTSFLSFAQAPT*CSFSHT
Trigger: TGTATGGGAAAAAGAACATCAAGTTGGAGCCTGTGC...AAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp CCCTTTCCGCTCATTCTTGTTAATTTTCTCTGCAAAGAGCCTGGCCTTGGTGGTTCGTTGTCAAACACCTaGAGGAACTCCTCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PFPLILVNFLCKEPGLGGSLSNT*RNSSLS
Trigger: TGAGAGCGAGGAGTTCCTGCAGGTGTTTGACAACGA...ACCACCAAGGCCAGGCTCTTTGCAGAGAAAATTAACAAGAATGAGCGGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTAAGGGCATCCACATCTaGTTTATCCCTAGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLKGIHI*FIPSGR
Trigger: TCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTT...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp GGTGAGCTGATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATCAAAGTCCAGCTTGTTaGAATTCAGGTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GELISGQVQSFHVHPLVYQSPAC*NSGTAS
Trigger: AGAAGCTGTACCTGAATTCCAACAAGCTGGACTTTG...ATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAATCAGCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACAGGAGGTGTCAAACATaGTGTTCAGGATGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHRRCQT*CSGCLL
Trigger: CAGAAGACATCCTGAACACCATGTTTGACACCTCCT...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCTGCCAGGTCATCTTaGCAAAAGTCGGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSARSS*QKSEHF
Trigger: GAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
3UTR CAA 72 bp TTGTGGCTCAAGTCCAGGACTGAGAGATCATCTAGCTaGAAGATGTCATCGGGGACTCCGGAATTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LWLKSRTERSSS*KMSSGTPEFFR
Trigger: TCTGAAGAATTCCGGAGTCCCCGATGACATCTTCAAGCTAGATGATCTCTCAGTCCTGGACTTGAGCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR TCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCACAGGCTCCAACTTaGTGTTCTTTTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAQAPT*CSFSHT
Trigger: TGTATGGGAAAAAGAACATCAAGTTGGAGCCTGTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR TCA 90 bp GTAGTCCACCGTCAACACATCGTCCCAATTCTTGAACTTGGCCTTGAACACCTGGCACAGGCTCCAACTTaGTGTTCTTTTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: VVHRQHIVPILELGLEHLAQAPT*CSFSHT
Trigger: TGTATGGGAAAAAGAACATCAAGTTGGAGCCTGTGC...CAGGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGTGTTGACGGTGGACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAFLSH*KVALLV
Trigger: AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCAAAGTCCAGCTTGTTaGAATTCAGGTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRQSPAC*NSGTAS
Trigger: AGAAGCTGTACCTGAATTCCAACAAGCTGGACTTTG...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAACTTCCTCTTGAAATaGGACAGGAACTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQNFLLK*DRNLGF
Trigger: GAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CCA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTAACTTCCTCTTGAAATaGGACAGGAACTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLNFLLK*DRNLGF
Trigger: GAACCCCAAGTTCCTGTCCCATTTCAAGAGGAAGTT...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CCA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTTGTCTTCTGCCAACTTaGCTTCGTCAGGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVCLLPT*LRQGLM
Trigger: CATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACA...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGGAGGTGTCAAACATaGTGTTCAGGATGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRRCQT*CSGCLL
Trigger: CAGAAGACATCCTGAACACCATGTTTGACACCTCCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR GCA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR GCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACATGATGTCATCATCTaGCAGGTCATCTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQHDVII*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGATGATGACATCATG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CCA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACAAAGTCCAGCTTGTTaGAATTCAGGTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: STFFASRQWMRPLPLPHQQSPAC*NSGTAS
Trigger: AGAAGCTGTACCTGAATTCCAACAAGCTGGACTTTG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS GCA 90 bp GTCCTCCCCCAGCCAGGCACCGGGTGCAGAGGGCGCTGCCGTTGGTaGGGATCTGGTAGAGGCTGGGCTGTTGGGCGCCCTGGACCGCCT +
Preference number: 5 (lower is better)
Translates to: VLPQPGTGCRGRCRW*GSGRGWAVGRPGPP
Trigger: AGGCGGTCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCCGGTGCCTGGCTGGGGGAGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580966.1
ENST00000638833.1
CDS GCA 90 bp CGCCACTGCGTCCTCCCCCAGCCAGGCACCGGGTGCAGAGGGCGCTaGCGTTGGTGCGGATCTGGTAGAGGCTGGGCTGTTGGGCGCCCT +
Preference number: 5 (lower is better)
Translates to: RHCVLPQPGTGCRGR*RWCGSGRGWAVGRP
Trigger: AGGGCGCCCAACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCCGGTGCCTGGCTGGGGGAGGACGCAGTGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580966.1
ENST00000638833.1
CDS CCA 90 bp TGCGTCCTCCCCCAGCCAGGCACCGGGTGCAGAGGGCGCTGCCGTTaGTGCGGATCTGGTAGAGGCTGGGCTGTTGGGCGCCCTGGACCG +
Preference number: 5 (lower is better)
Translates to: CVLPQPGTGCRGRCR*CGSGRGWAVGRPGP
Trigger: CGGTCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCCGGTGCCTGGCTGGGGGAGGACGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580966.1
ENST00000638833.1
CDS GCA 90 bp GGCAGGTTGCTCTGGGTGCGCTGGGTGCTCCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGGAGCGGAGCTGTGCATGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: GRLLWVRWVLRRCRV*RAVIAGSGAVHAAG
Trigger: CCCTGCTGCATGCACAGCTCCGCTCCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581401.1
ENST00000639299.1
CDS CCA 90 bp GCCAACTTGGCCTCCAGGCTGGTGGGCAGGTTGCTCTGGGTGCGCTaGGTGCTCCGCAGGTGCAGGGTCTGCAGGGCCGTCATCGCTGGG +
Preference number: 5 (lower is better)
Translates to: ANLASRLVGRLLWVR*VLRRCRVCRAVIAG
Trigger: CCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCTGGAGGCCAAGTTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577485.1
ENST00000639125.1
CDS GCA 90 bp AGGCTGGTGGGCAGGTTGCTCTGGGTGCGCTGGGTGCTCCGCAGGTaGAGGGTCTGCAGGGCCGTCATCGCTGGGAGCTGCCTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: RLVGRLLWVRWVLRR*RVCRAVIAGSCLLW
Trigger: CCACAACAGGCAGCTCCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545457.6
ENST00000638404.1
CDS GCA 90 bp CATCAGCAAGGATTCAGGCCTGGCTCCCTGACGCTTGCTCGCCACTaGGTCCTCCCCCAGCCAGGCACCGGGTGCAGAGGGCGCTGCCGT +
Preference number: 5 (lower is better)
Translates to: HQQGFRPGSLTLARH*VLPQPGTGCRGRCR
Trigger: ACGGCAGCGCCCTCTGCACCCGGTGCCTGGCTGGGGGAGGACGCAGTGGCGAGCAAGCGTCAGGGAGCCAGGCCTGAATCCTTGCTGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580966.1
ENST00000638833.1
CDS-3UTR CAA 90 bp GGCGTGCTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGGCAGAGCAAGCTTTCTaGTCGAGTGTGGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: GVLLIALADQAQPARPLMAEQAF*SSVASP
Trigger: CGGGGAGGCCACACTCGACAAGAAAGCTTGCTCTGC...CATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCGCTGCCGTTGGTGCGGATCTGGTAGAGGCTGGGCTGTTGGGCGCCCTGGACCCCACCTTGTACAGCTaGGGCTGCGGCGGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: GAAVGADLVEAGLLGALDPTLYS*GCGGQK
Trigger: CTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGGG...GTCCAGGGCGCCCAACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS GCA 90 bp GGCAGGTTGCTCTGGGTGCGCTGGGTGCTCCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGGAGCTGCCTGTTGTGGCTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: GRLLWVRWVLRRCRV*RAVIAGSCLLWLRF
Trigger: GAACCTCAGCCACAACAGGCAGCTCCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545457.6
ENST00000638404.1
CDS-3UTR CAA 90 bp GCTGGTGGGCAGGTTGCTCTGGGTGCGCTGGGTGCTCCGCAGGTGCAGGGTCTGTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: AGGQVALGALGAPQVQGLSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...CAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAGCAACCTGCCCACCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CAA 90 bp GCTGCGGCTGACCGTGGCATGGCGTGGCCGGTGCAGCATCCCGCACAGCTCCTGAGGCTGGAGTCGGTGTaGATCTGGATGCACCGGGTG +
Preference number: 5 (lower is better)
Translates to: AAADRGMAWPVQHPAQLLRLESV*IWMHRV
Trigger: CACCCGGTGCATCCAGATCAACACCGACTCCAGCCT...CAGGAGCTGTGCGGGATGCTGCACCGGCCACGCCATGCCACGGTCAGCCGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS TCA 90 bp GTCATCGCTGGGAGCGGAGCTGTGCATGCAGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGTGCACCAGGCGGCGCATCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: VIAGSGAVHAAGGFH*ARASAGAPGGASAG
Trigger: CCCCGCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACAGCTCCGCTCCCAGCGATGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581401.1
ENST00000639299.1
CDS-3UTR CAA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGCACGGTCTGCGGGCTaGGGCGGCATGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQARSAG*GGMTRL
Trigger: CAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGC...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS TCA 90 bp GGCCAGTGCGGTTCAGCTTCAGCCACCGCAGGCTGGTCATGGCCTTaGCATTCTCAGGGAAGTAGCCGCCAGGCACTGGGCGGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: GQCGSASATAGWSWP*HSQGSSRQALGGGL
Trigger: GAGGCCTCCGCCCAGTGCCTGGCGGCTACTTCCCTGAGAATGTCAAGGCCATGACCAGCCTGCGGTGGCTGAAGCTGAACCGCACTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579294.5
ENST00000638812.1
CDS CCA 90 bp CCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGGGGTGCAGGGTaGGGTGCATCAGCTGGGGCCCATACACCAGGTGCCAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PCQVIAGQIHVWGAG*GASAGAHTPGARAA
Trigger: GGCTGCCCTGGCACCTGGTGTATGGGCCCCAGCTGATGCACCCCACCCTGCACCCCAGACGTGGATCTGTCCTGCAATGACCTGACACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461110.2
ENST00000640363.1
CDS CCA 90 bp TGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATATATACCTGGCAAGGGGACAGCGAGC +
Preference number: 5 (lower is better)
Translates to: CPCGPGAAGAAAHVP*TACAGYIPGKGTAS
Trigger: GCTCGCTGTCCCCTTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS-3UTR CAA 90 bp CAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGAAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: QAGEGVQTLGHPCQVIAGRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...TCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CAA 90 bp GGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTCCAGGTTGGTGAGCTaGCCAATGCCTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GGAGWGGCTDTRAPVSGHSRLVS*PMPEGS
Trigger: GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGA...ATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGGCACGGTCTGCGGGCTaGGGCGGCATGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRARSAG*GGMTRL
Trigger: CAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGC...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATGCAGAGCAAGCTTTCTaGTCGAGTGTGGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: DQAQPARPLMFLGPHVLDAEQAF*SSVASP
Trigger: CGGGGAGGCCACACTCGACAAGAAAGCTTGCTCTGC...ATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGGTAGAGGCTGGGCTGTaGGGCGCCCTGGACCGCCTT +
Preference number: 5 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRVEAGL*GALDRL
Trigger: AAGGCGGTCCAGGGCGCCCAACAGCCCAGCCTCTAC...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: AGWGGCTDTRAPVSGHCRKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...CCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS CCA 90 bp CCTGCCTCCACAACTCTGCACCATCCAGGAAGGCCTCAGCCACACTaGCCCAACTACCCCTGCAGCTTCCCTCCCTCACTCACCCGGCCT +
Preference number: 5 (lower is better)
Translates to: PASTTLHHPGRPQPH*PNYPCSFPPSLTRP
Trigger: AGGCCGGGTGAGTGAGGGAGGGAAGCTGCAGGGGTAGTTGGGCCAGTGTGGCTGAGGCCTTCCTGGATGGTGCAGAGTTGTGGAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582626.1
ENST00000638205.1
CDS CCA 90 bp AGTGTTCCTGGGCCGGAATGGGGAGCACAGGCTCAGCAGGGTGGGTaGGGTGTCCAGAGTCCCTGCCTGCCTCCACAACTCTGCACCATC +
Preference number: 5 (lower is better)
Translates to: SVPGPEWGAQAQQGG*GVQSPCLPPQLCTI
Trigger: GATGGTGCAGAGTTGTGGAGGCAGGCAGGGACTCTGGACACCCCACCCACCCTGCTGAGCCTGTGCTCCCCATTCCGGCCCAGGAACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582626.1
ENST00000638205.1
CDS-3UTR CAA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGGGCGGCATGACCAGGTaGGGGTTCTCCCGCACATCC +
Preference number: 5 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRGGMTR*GFSRTS
Trigger: GGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCC...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTGCACGGTCTGCGGGCTaGGGCGGCATGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAARSAG*GGMTRL
Trigger: CAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGC...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGCGAGCCATAGGGTCCTaGGGCCCACTCCCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGRAIGS*GPLPAA
Trigger: AGCTGCAGGGAGTGGGCCCAAGGACCCTATGGCTCG...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000638207.2
ENST00000639036.1
CDS-3UTR CAA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCGAGCCATAGGGTCCTaGGGCCCACTCCCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRRAIGS*GPLPAA
Trigger: AGCTGCAGGGAGTGGGCCCAAGGACCCTATGGCTCG...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000638207.2
ENST00000639036.1
CDS-3UTR CAA 90 bp AGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATCCCACCTTGTACAGCTaGGGCTGCGGCGGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: RRSRRGRSCSLDRMCWIYPTLYS*GCGGQK
Trigger: CTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGGG...ATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGAAGCCCAGGCCCACCTaGTACAGCTTGGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGKPRPT*YSLGCG
Trigger: GCCGCAGCCCAAGCTGTACAAGGTGGGCCTGGGCTT...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCAGACCAGGCGCGGGGACTaGCGGCCGAGCCAGATGAAC +
Preference number: 5 (lower is better)
Translates to: YAQGQLRDLVAAEVEAAQTRRGD*RPSQMN
Trigger: GTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGT...CTGCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGTAGAGGCTGGGCTGTaGGGCGCCCTGGACCGCCTT +
Preference number: 5 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLVEAGL*GALDRL
Trigger: AAGGCGGTCCAGGGCGCCCAACAGCCCAGCCTCTAC...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGTAGAGGCTGGGCTGTaGGGCGCCCTGGACCGCCTT +
Preference number: 5 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVVEAGL*GALDRL
Trigger: AAGGCGGTCCAGGGCGCCCAACAGCCCAGCCTCTAC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPCCSLP*RTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCA...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: GAAAHVPWTACAGYIPGRCCSLP*RTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCA...CCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CAA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVCCSLP*RTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCA...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATACCATCTTGAAGTCGTaGCCGCTGAGGTCCACGCCA +
Preference number: 5 (lower is better)
Translates to: GGAGWGGCTDTRAPVSGHTILKS*PLRSTP
Trigger: TGGCGTGGACCTCAGCGGCAACGACTTCAAGATGGT...ATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS GCA 90 bp ACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTaGTGGATATATACCTGGCAAGGGGACAGCGAGCCTTGGGTGATG +
Preference number: 5 (lower is better)
Translates to: TRRSRRGRSCSLDRM*WIYTWQGDSEPWVM
Trigger: CATCACCCAAGGCTCGCTGTCCCCTTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS GCA 90 bp CTGCACCATCCAGGAAGGCCTCAGCCACACTGGCCCAACTACCCCTaGAGCTTCCCTCCCTCACTCACCCGGCCTCTTCTTGCACACCTC +
Preference number: 5 (lower is better)
Translates to: LHHPGRPQPHWPNYP*SFPPSLTRPLLAHL
Trigger: GAGGTGTGCAAGAAGAGGCCGGGTGAGTGAGGGAGGGAAGCTGCAGGGGTAGTTGGGCCAGTGTGGCTGAGGCCTTCCTGGATGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582626.1
ENST00000638205.1
CDS CCA 90 bp ACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTaGGGTGCAGGGTGGGGTGCATCAGCTGGGGCCCATACACCAGGT +
Preference number: 5 (lower is better)
Translates to: TLGHPCQVIAGQIHV*GAGWGASAGAHTPG
Trigger: ACCTGGTGTATGGGCCCCAGCTGATGCACCCCACCCTGCACCCCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461110.2
ENST00000640363.1
CDS CCA 90 bp AGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTaGATATATACCTGGCAAGGGGACAGCGAGCCTTGGGTGATGACC +
Preference number: 5 (lower is better)
Translates to: RRSRRGRSCSLDRMC*IYTWQGDSEPWVMT
Trigger: GGTCATCACCCAAGGCTCGCTGTCCCCTTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS-3UTR CAA 90 bp GGCCAGGGCCTTGCAGAAGGCGCTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTGCACTCTGTCAGCTGGTaGTGGCTCAAGTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: GQGLAEGAPGVEAAGKGVHSVSW*WLKSRT
Trigger: AGTCCTGGACTTGAGCCACAACCAGCTGACAGAGTG...CACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGCCTTCTGCAAGGCCCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATATGGTGTCGATGCTGTaGTGGCTGAGGTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: GGAGWGGCTDTRAPVSGHMVSML*WLRFST
Trigger: GGTGCTGAACCTCAGCCACAACAGCATCGACACCAT...ATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AGWGGCTDTRAPVSGHCRSRGFP*STSVCR
Trigger: CCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCT...CCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CAA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GGFTRALTLWRELDFPDPRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: AMNSSRLVSLPMPEGSPSRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...TGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GESWISQTPEGTCQGHPHRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCAACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: RRRRLGRVYRHSGTRVRSTRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...TGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CAA 90 bp GCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCGGCATGACCAGGTaGGGGTTCTCCCGCACATCC +
Preference number: 5 (lower is better)
Translates to: AAGAAAHVPWTACAGYIPGGMTR*GFSRTS
Trigger: GGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCC...AGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGCACGGTCTGCGGGCTaGGGCGGCATGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALARSAG*GGMTRL
Trigger: CAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCACGAGCCATAGGGTCCTaGGGCCCACTCCCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PARPLMFLGPHVLDIYLARAIGS*GPLPAA
Trigger: AGCTGCAGGGAGTGGGCCCAAGGACCCTATGGCTCG...TGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGCAAAGAGCCTGGCCTaGGTGGTGCTGCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQAKSLA*VVLLSV
Trigger: CACACTGAGCAGCACCACCAAGGCCAGGCTCTTTGC...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTACCAGGCGCGGGGACTaGCGGCCGAGCCAGATGAAC +
Preference number: 5 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTTRRGD*RPSQMN
Trigger: GTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGT...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCGGCCAGAAGTCTTCAGGCACGTGCTTCTTGATCTCAGAGGGCTCCCCACCCGTGAGCCAGCCCATATaGGAGGCTTCACGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GGQKSSGTCFLISEGSPPVSQPI*EASRPC
Trigger: GCAGGGCCGTGAAGCCTCCAATATGGGCTGGCTCAC...GGGTGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGAAGACTTCTGGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACAAATGGGACAGGAACTaGGGGTTCTCCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SLPLRTRRSRRGRSCSLDKWDRN*GFSCCC
Trigger: GCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTT...GTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGTAGAGGCTGGGCTGTaGGGCGCCCTGGACCGCCTT +
Preference number: 5 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTVEAGL*GALDRL
Trigger: AAGGCGGTCCAGGGCGCCCAACAGCCCAGCCTCTAC...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCGTGCTGCTCATTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: GVLLIALADQAQPARPLMICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...CATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CAA 90 bp AGGCGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: RRRRLGRVYRHSGTRVRSSGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...TGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS TCA 90 bp GGCCAGTGCGGTTCAGCTTCAGCCACCGCAGGCTGGTCATGGCCTTaGCATTCTCAGGGAAGTAGCCGCCCTGGGGGAAGGATGTCAAGG +
Preference number: 5 (lower is better)
Translates to: GQCGSASATAGWSWP*HSQGSSRPGGRMSR
Trigger: CCTTGACATCCTTCCCCCAGGGCGGCTACTTCCCTGAGAATGTCAAGGCCATGACCAGCCTGCGGTGGCTGAAGCTGAACCGCACTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000473425.2
ENST00000578101.5
ENST00000638982.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCCGCCCTTGAAGTCGTaGCCGCTGAGGTCCACGCCA +
Preference number: 5 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAPPLKS*PLRSTP
Trigger: TGGCGTGGACCTCAGCGGCAACGACTTCAAGGGCGG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGCTGCTTCTCCTCTGCCTCAGCGGTTGCTTCCTCGCCTTCTTTGCCCTCGGCCGAATTCTTCAGACTGTaGGCTCGGGCCACGATGGCG +
Preference number: 5 (lower is better)
Translates to: GCFSSASAVASSPSLPSAEFFRL*ARATMA
Trigger: CGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTC...GGCCGAGGGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCCACTCTGTCAGCTGGTaGTGGCTCAAGTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: GAGWGGCTDTRAPVSGHCHSVSW*WLKSRT
Trigger: AGTCCTGGACTTGAGCCACAACCAGCTGACAGAGTG...GCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp ACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: THWSMHRDSSVIWLLLRLRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...CAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CAA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: THTVERVGFPRPLRAPVRRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGAGCTCCGTGATCTGGTaGCTGCTGAGGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRSSVIW*LLRLRR
Trigger: CCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCT...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTGCACGGTCTGCGGGCTaGGGCGGCATGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILARSAG*GGMTRL
Trigger: CAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGC...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGCACGGTCTGCGGGCTaGGGCGGCATGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: GASHVHSHCGESWISQTPARSAG*GGMTRL
Trigger: CAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGC...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGAGCGAGAAGTCGATGTaGTACCACTCAGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: RRLGRVYRHSGTRVRSLQSEKSM*YHSAAR
Trigger: CCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCT...CTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCTCCAGAGAGGTCCCCTaGAGGGGCACAGGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPSREVP*RGTGSN
Trigger: GTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGGA...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GCAGTCAGCCTCGTAGAACTTGCCGTGGAAGGCTTCCTCCACCAGCACAGGCACTCCAGAGAGGTCCCCTaGAGGGGCACAGGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: AVSLVELAVEGFLHQHRHSREVP*RGTGSN
Trigger: GTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGGA...GTGCCTGTGCTGGTGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTTCCAGAGAGGTCCCCTaGAGGGGCACAGGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCSREVP*RGTGSN
Trigger: GTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGGA...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGCCCACCTTGTACAGCTaGGGCTGCGGCGGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALPTLYS*GCGGQK
Trigger: CTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGGG...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCACCAGGCGCGGGGACTaGCGGCCGAGCCAGATGAAC +
Preference number: 5 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVTRRGD*RPSQMN
Trigger: GTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGT...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTACCAGGCGCGGGGACTaGCGGCCGAGCCAGATGAAC +
Preference number: 5 (lower is better)
Translates to: SHCGESWISQTPEGTCQGTRRGD*RPSQMN
Trigger: GTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGT...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTACCAGGCGCGGGGACTaGCGGCCGAGCCAGATGAAC +
Preference number: 5 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGTRRGD*RPSQMN
Trigger: GTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGAGCCGCGCAAACTTCTaGCCCTCCAGCACGAAACCC +
Preference number: 5 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGSRANF*PSSTKP
Trigger: GGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGCT...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGCCTCTGCCTCAGCGGTaGCTTCCTCGCCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGPLPQR*LPRLLC
Trigger: GCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGG...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGTAGAGGCTGGGCTGTaGGGCGCCCTGGACCGCCTT +
Preference number: 5 (lower is better)
Translates to: GASHVHSHCGESWISQTPVEAGL*GALDRL
Trigger: AAGGCGGTCCAGGGCGCCCAACAGCCCAGCCTCTAC...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTAGAGGCTGGGCTGTaGGGCGCCCTGGACCGCCTT +
Preference number: 5 (lower is better)
Translates to: THTVERVGFPRPLRAPVRVEAGL*GALDRL
Trigger: AAGGCGGTCCAGGGCGCCCAACAGCCCAGCCTCTAC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPCCSLP*RTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCA...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: GASHVHSHCGESWISQTPCCSLP*RTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCA...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: HVHSHCGESWISQTPEGTKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATAGGGGACAGCGAGCCTaGGGTGATGACCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: GESWISQTPEGTCQGHPHRGQRA*GDDPAL
Trigger: CAGGGCAGGGTCATCACCCAAGGCTCGCTGTCCCCT...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS TCA 90 bp CCTCCCATCCCCCTACTGAGGGCCTCAGACGCACGGGCAGTGAGGTaGGCTGATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACT +
Preference number: 5 (lower is better)
Translates to: PPIPLLRASDARAVR*ADFGTGSEFPRAPT
Trigger: AGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCCCGTGCGTCTGAGGCCCTCAGTAGGGGGATGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488221.5
ENST00000639925.1
CDS CCA 90 bp AGAAAGGTCTGGAAGCCAAGGCACCGGCCACATCAGCTTTCATCCTaGTCTTCCGGCCACCCCGGAGACGCCACTCTGAACAGCACAGGC +
Preference number: 5 (lower is better)
Translates to: RKVWKPRHRPHQLSS*SSGHPGDATLNSTG
Trigger: GCCTGTGCTGTTCAGAGTGGCGTCTCCGGGGTGGCCGGAAGACCAGGATGAAAGCTGATGTGGCCGGTGCCTTGGCTTCCAGACCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496727.1
ENST00000638492.1
CDS-3UTR CAA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTCCGCCCTTGAAGTCGTaGCCGCTGAGGTCCACGCCA +
Preference number: 5 (lower is better)
Translates to: GASHVHSHCGESWISQTPPPLKS*PLRSTP
Trigger: TGGCGTGGACCTCAGCGGCAACGACTTCAAGGGCGG...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGACCGCCCTTGAAGTCGTaGCCGCTGAGGTCCACGCCA +
Preference number: 5 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERPPLKS*PLRSTP
Trigger: TGGCGTGGACCTCAGCGGCAACGACTTCAAGGGCGG...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTCCGCCCTTGAAGTCGTaGCCGCTGAGGTCCACGCCA +
Preference number: 5 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILPPLKS*PLRSTP
Trigger: TGGCGTGGACCTCAGCGGCAACGACTTCAAGGGCGG...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCAGCACCAGCATGTTCTaGGCGTTCTCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPSTSMF*AFSSSR
Trigger: GCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGCT...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCAGAGCACCAGCATGTTCTaGGCGTTCTCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: YAQGQLRDLVAAEVEAAQSTSMF*AFSSSR
Trigger: GCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGCT...CTGCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGGCGGCGCAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SMHRDSSVIWLLLRLRRRSRGFP*STSVCR
Trigger: CCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCT...GCGCCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CAA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCSRGFP*STSVCR
Trigger: CCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCT...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: FGTGSEFPRAPTGLCTGTRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...TGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CAA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GESWISQTPEGTCQGHPHSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: AGWGGCTDTRAPVSGHCRTRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...CCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CAA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGTCCAGGTTGGTGAGCTaGCCAATGCCTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVSRLVS*PMPEGS
Trigger: GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGA...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAGGCGGCATGACCAGGTaGGGGTTCTCCCGCACATCC +
Preference number: 5 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGGGMTR*GFSRTS
Trigger: GGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCC...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGCACGGTCTGCGGGCTaGGGCGGCATGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: FGTGSEFPRAPTGLCTGTARSAG*GGMTRL
Trigger: CAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGC...TGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTCTCCGCAGTCGCATCTaGCGAGCCATAGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAALRSRI*RAIGSL
Trigger: CAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAG...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGTCCTGGGCTGAATCCTaGCGCCTCCGCAGTCGCATC +
Preference number: 5 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLSWAES*RLRSRI
Trigger: GATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGA...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCAGAGCAAGCTTTCTaGTCGAGTGTGGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVAEQAF*SSVASP
Trigger: CGGGGAGGCCACACTCGACAAGAAAGCTTGCTCTGC...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGTCCAGAGAGGTCCCCTaGAGGGGCACAGGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLSREVP*RGTGSN
Trigger: GTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGGA...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGACCCTCCTCCAGAGAGGTCCCCTaGAGGGGCACAGGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: RVRSLQDRSTSARLLRPSSREVP*RGTGSN
Trigger: GTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGGA...GGAGGGTCTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGACCCACCTTGTACAGCTaGGGCTGCGGCGGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGPTLYS*GCGGQK
Trigger: CTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGGG...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAAAGCCCAGGCCCACCTaGTACAGCTTGGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGKPRPT*YSLGCG
Trigger: GCCGCAGCCCAAGCTGTACAAGGTGGGCCTGGGCTT...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAAGCCCAGGCCCACCTaGTACAGCTTGGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASKPRPT*YSLGCG
Trigger: GCCGCAGCCCAAGCTGTACAAGGTGGGCCTGGGCTT...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCAAGCCCAGGCCCACCTaGTACAGCTTGGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCKPRPT*YSLGCG
Trigger: GCCGCAGCCCAAGCTGTACAAGGTGGGCCTGGGCTT...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCAGCAGCCGCATTCTaGGCATCAGCTCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCAAAAF*ASAPPW
Trigger: CCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTGC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGCAGCAGCCGCATTCTaGGCATCAGCTCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: QTLGHPCQVIAGQIHVCEAAAAF*ASAPPW
Trigger: CCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTGC...CTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGACCAGGCGCGGGGACTaGCGGCCGAGCCAGATGAAC +
Preference number: 5 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWTRRGD*RPSQMN
Trigger: GTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGT...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCACCTCTGCCTCAGCGGTaGCTTCCTCGCCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: PARPLMFLGPHVLDIYLAPLPQR*LPRLLC
Trigger: GCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGG...TGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCGTGAGCCAGCCCATATaGGAGGCTTCACGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GGFTRALTLWRELDFPDPVSQPI*EASRPC
Trigger: GCAGGGCCGTGAAGCCTCCAATATGGGCTGGCTCAC...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCAGGCTGGAGTCGGTGTaGATCTGGATGCACCGGGTG +
Preference number: 5 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPRLESV*IWMHRV
Trigger: CACCCGGTGCATCCAGATCAACACCGACTCCAGCCT...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGGCCTTCAGGCTCAGCTaGATCTCCACCTGGCTAGTC +
Preference number: 5 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGAFRLS*ISTWLV
Trigger: GACTAGCCAGGTGGAGATCAAGCTGAGCCTGAAGGC...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVCCSLP*RTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCA...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWCCSLP*RTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCA...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHCCSLP*RTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCA...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFACCSLP*RTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCA...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: SHCGESWISQTPEGTCQGKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGAAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCGGCCGCTCATGTTCCTaGGGTCCAGAGAGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: HVHSHCGESWISQTPEGTGRSCS*GPERSP
Trigger: AGGGGACCTCTCTGGACCCAAGGAACATGAGCGGCC...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578558.5
ENST00000640595.1
CDS-3UTR CAA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGGCCGCTCATGTTCCTaGGGTCCAGAGAGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAGRSCS*GPERSP
Trigger: AGGGGACCTCTCTGGACCCAAGGAACATGAGCGGCC...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578558.5
ENST00000640595.1
CDS TCA 90 bp CATCCCCCTACTGAGGGCCTCAGACGCACGGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCT +
Preference number: 5 (lower is better)
Translates to: HPPTEGLRRTGSEVS*FRDRFRVSTCTHWS
Trigger: AGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCCCGTGCGTCTGAGGCCCTCAGTAGGGGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488221.5
ENST00000639925.1
CDS-3UTR CAA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCGCCCTTGAAGTCGTaGCCGCTGAGGTCCACGCCA +
Preference number: 5 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRPPLKS*PLRSTP
Trigger: TGGCGTGGACCTCAGCGGCAACGACTTCAAGGGCGG...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTAGCACCAGCATGTTCTaGGCGTTCTCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGASTSMF*AFSSSR
Trigger: GCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGCT...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCAGCACCAGCATGTTCTaGGCGTTCTCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: GGFTRALTLWRELDFPDPSTSMF*AFSSSR
Trigger: GCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGCT...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAGCACCAGCATGTTCTaGGCGTTCTCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: AMNSSRLVSLPMPEGSPSSTSMF*AFSSSR
Trigger: GCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGCT...TGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCTGCTTCTCCTCTGCCTCAGCGGTTGCTTCCTCGCCTTCTTTGCCCTCGGCCTTGATGAAGAGCTGGTaGGGGATGGTGTCGATGCTG +
Preference number: 5 (lower is better)
Translates to: GCFSSASAVASSPSLPSALMKSW*GMVSML
Trigger: CAGCATCGACACCATCCCCAACCAGCTCTTCATCAA...GGCCGAGGGCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGGAGAAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp AGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RVYRHSGTRVRSLQDRSTSRGFP*STSVCR
Trigger: CCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCT...CGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CAA 90 bp TCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SGQVQSFHVHPLVYAQGQSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...CTGTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CAA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTGGCGGCATGACCAGGTaGGGGTTCTCCCGCACATCC +
Preference number: 5 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAGGMTR*GFSRTS
Trigger: GGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCC...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCGGCATGACCAGGTaGGGGTTCTCCCGCACATCC +
Preference number: 5 (lower is better)
Translates to: ASHVHSHCGESWISQTPEGGMTR*GFSRTS
Trigger: GGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCC...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACGGCGGCATGACCAGGTaGGGGTTCTCCCGCACATCC +
Preference number: 5 (lower is better)
Translates to: FRDRFRVSTCTHWSMHRDGGMTR*GFSRTS
Trigger: GGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCC...GTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGCACGGTCTGCGGGCTaGGGCGGCATGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTARSAG*GGMTRL
Trigger: CAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGC...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGAGCGAGAAGTCGATGTaGTACCACTCAGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLSEKSM*YHSAAR
Trigger: CCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCT...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATCTCCGCAGTCGCATCTaGCGAGCCATAGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GESWISQTPEGTCQGHPHLRSRI*RAIGSL
Trigger: CAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAG...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCTCCGCAGTCGCATCTaGCGAGCCATAGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGALRSRI*RAIGSL
Trigger: CAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAG...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCCTCCGCAGTCGCATCTaGCGAGCCATAGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HVHSHCGESWISQTPEGTLRSRI*RAIGSL
Trigger: CAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAG...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGTCCTGGGCTGAATCCTaGCGCCTCCGCAGTCGCATC +
Preference number: 5 (lower is better)
Translates to: THTVERVGFPRPLRAPVRSWAES*RLRSRI
Trigger: GATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGA...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTTCCTGGGCTGAATCCTaGCGCCTCCGCAGTCGCATC +
Preference number: 5 (lower is better)
Translates to: GASHVHSHCGESWISQTPSWAES*RLRSRI
Trigger: GATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGA...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCTCCTGGGCTGAATCCTaGCGCCTCCGCAGTCGCATC +
Preference number: 5 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPSWAES*RLRSRI
Trigger: GATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGA...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CCAGCCCATATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAATCCTGGGCTGAATCCTaGCGCCTCCGCAGTCGCATC +
Preference number: 5 (lower is better)
Translates to: PAHIGGFTALPEVHDALESWAES*RLRSRI
Trigger: GATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGA...TTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATATGGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTTCCTGGGCTGAATCCTaGCGCCTCCGCAGTCGCATC +
Preference number: 5 (lower is better)
Translates to: SHCGESWISQTPEGTCQGSWAES*RLRSRI
Trigger: GATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGA...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGCAGAGCAAGCTTTCTaGTCGAGTGTGGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALAEQAF*SSVASP
Trigger: CGGGGAGGCCACACTCGACAAGAAAGCTTGCTCTGC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCTCCAGAGAGGTCCCCTaGAGGGGCACAGGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: TVERVGFPRPLRAPVRVISREVP*RGTGSN
Trigger: GTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGGA...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCGCAAAGAGCCTGGCCTaGGTGGTGCTGCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: GGFTRALTLWRELDFPDPAKSLA*VVLLSV
Trigger: CACACTGAGCAGCACCACCAAGGCCAGGCTCTTTGC...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp AGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGGCAAAGAGCCTGGCCTaGGTGGTGCTGCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: RVYRHSGTRVRSLQDRSTAKSLA*VVLLSV
Trigger: CACACTGAGCAGCACCACCAAGGCCAGGCTCTTTGC...CGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGCCCACCTTGTACAGCTaGGGCTGCGGCGGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWPTLYS*GCGGQK
Trigger: CTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGGG...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CCTCTTGAAATGGGACAGGAACTTGGGGTTCTCCTGCTGCTGCGTCATGCGTACAAGCCCAGGCCCACCTaGTACAGCTTGGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: PLEMGQELGVLLLLRHAYKPRPT*YSLGCG
Trigger: GCCGCAGCCCAAGCTGTACAAGGTGGGCCTGGGCTT...GTACGCATGACGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTTCAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTCTGCGAGGTTGCTCAGGGCATCAGCTCCACCTaGGGACGCTGCTTATGTTCC +
Preference number: 5 (lower is better)
Translates to: GHPCQVIAGQIHVCEVAQGISST*GRCLCS
Trigger: GGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGCC...CTGAGCAACCTCGCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCCAGGGCCTTGCAGAAGGCGCTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTGACATCGTCCCAATTCTaGAACTTGGCCTTGAACACC +
Preference number: 5 (lower is better)
Translates to: GQGLAEGAPGVEAAGKGVTSSQF*NLALNT
Trigger: GGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGT...CACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGCCTTCTGCAAGGCCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCAGCCGCGCAAACTTCTaGCCCTCCAGCACGAAACCC +
Preference number: 5 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCSRANF*PSSTKP
Trigger: GGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGCT...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCCCTCTGCCTCAGCGGTaGCTTCCTCGCCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: HVHSHCGESWISQTPEGTPLPQR*LPRLLC
Trigger: GCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGG...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATAAATGGGACAGGAACTaGGGGTTCTCCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RRSRRGRSCSLDRMCWIYKWDRN*GFSCCC
Trigger: GCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTT...ATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTTGGACCGCCTTCCTCTaGCCCCGGTGGATGATGAAC +
Preference number: 5 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAWTAFL*PRWMMN
Trigger: GTTCATCATCCACCGGGGCAAGAGGAAGGCGGTCCA...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCAGGCTGGAGTCGGTGTaGATCTGGATGCACCGGGTG +
Preference number: 5 (lower is better)
Translates to: GGFTRALTLWRELDFPDPRLESV*IWMHRV
Trigger: CACCCGGTGCATCCAGATCAACACCGACTCCAGCCT...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp GGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGCCTTCAGGCTCAGCTaGATCTCCACCTGGCTAGTC +
Preference number: 5 (lower is better)
Translates to: GHLSGSSPLVLLEATGDCAFRLS*ISTWLV
Trigger: GACTAGCCAGGTGGAGATCAAGCTGAGCCTGAAGGC...ACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMCCSLP*RTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCA...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCGCTGGGAGCTGCCTGTaGTGGCTGAGGTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASAGSCL*WLRFST
Trigger: GGTGCTGAACCTCAGCCACAACAGGCAGCTCCCAGC...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545457.6
ENST00000638404.1
CDS TCA 90 bp TGTCGAGTGTGGCCTCCCCGCCAATCCAGTAGTAGATCTCCCAGTTaGGGGAGCCGCTGTCATCCAGAAAGGTCTGGAAGCCAAGGCACC +
Preference number: 5 (lower is better)
Translates to: CRVWPPRQSSSRSPS*GSRCHPERSGSQGT
Trigger: GGTGCCTTGGCTTCCAGACCTTTCTGGATGACAGCGGCTCCCTCAACTGGGAGATCTACTACTGGATTGGCGGGGAGGCCACACTCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496727.1
ENST00000638492.1
CDS TCA 90 bp GGCCAGTGCGGTTCAGCTTCAGCCACCGCAGGCTGGTCATGGCCTTaGCATTCTCAGGGAAGTAGCCGCCCATCTGTGAGAACACAGACA +
Preference number: 5 (lower is better)
Translates to: GQCGSASATAGWSWP*HSQGSSRPSVRTQT
Trigger: TGTCTGTGTTCTCACAGATGGGCGGCTACTTCCCTGAGAATGTCAAGGCCATGACCAGCCTGCGGTGGCTGAAGCTGAACCGCACTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581349.5
ENST00000639967.1
CDS GCA 90 bp GGCCTTGAACACCTGCCAGGGAGGCCATCAACTAACCATGAGGGGTaGGGCATGATTAGAGTTGGAGGAAGTAGCCCGAGGCTTGAGGCG +
Preference number: 5 (lower is better)
Translates to: GLEHLPGRPSTNHEG*GMIRVGGSSPRLEA
Trigger: CGCCTCAAGCCTCGGGCTACTTCCTCCAACTCTAATCATGCCGCACCCCTCATGGTTAGTTGATGGCCTCCCTGGCAGGTGTTCAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459958.2
ENST00000639123.1
CDS-3UTR CAA 90 bp CCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGAGCGTGGTCAGGTTGTaGTGGCTCACAGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: PEGTCQGHPHWCCLRLLGSVVRL*WLTDKC
Trigger: ACACTTGTCTGTGAGCCACAACAACCTGACCACGCT...CCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATGAATTCTTCAGACTGTaGGCTCGGGCCACGATGGCG +
Preference number: 5 (lower is better)
Translates to: GESWISQTPEGTCQGHPHEFFRL*ARATMA
Trigger: CGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTC...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGAATTCTTCAGACTGTaGGCTCGGGCCACGATGGCG +
Preference number: 5 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAEFFRL*ARATMA
Trigger: CGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTC...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCGAATTCTTCAGACTGTaGGCTCGGGCCACGATGGCG +
Preference number: 5 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCEFFRL*ARATMA
Trigger: CGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTC...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTAGCACCAGCATGTTCTaGGCGTTCTCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: SHCGESWISQTPEGTCQGSTSMF*AFSSSR
Trigger: GCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGCT...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCAGCACCAGCATGTTCTaGGCGTTCTCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: TVERVGFPRPLRAPVRVISTSMF*AFSSSR
Trigger: GCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGCT...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILSRGFP*STSVCR
Trigger: CCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCT...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAAGTCCAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: NSSRLVSLPMPEGSPSKSSRGFP*STSVCR
Trigger: CCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCT...GGACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGAAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: TRWFLFRTSFLSFGHLQRRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...TCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGATCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: ASHVHSHCGESWISQTPESTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGAGCTCCGTGATCTGGTaGCTGCTGAGGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: THTVERVGFPRPLRAPVRSSVIW*LLRLRR
Trigger: CCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCT...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAAGCTCCGTGATCTGGTaGCTGCTGAGGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERSSVIW*LLRLRR
Trigger: CCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCT...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTAGCTCCGTGATCTGGTaGCTGCTGAGGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILSSVIW*LLRLRR
Trigger: CCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCT...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTAGCTCCGTGATCTGGTaGCTGCTGAGGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: HPLVYAQGQLRDLVAAEVSSVIW*LLRLRR
Trigger: CCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCT...AACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CAA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGCTCCGTGATCTGGTaGCTGCTGAGGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVSSVIW*LLRLRR
Trigger: CCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCT...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ACCCACTGGTCTATGCACAGGGACAGCTCCGTGATCTGGTTGCTGCTGAGGTTGAGCTCCGTGATCTGGTaGCTGCTGAGGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: THWSMHRDSSVIWLLLRLSSVIW*LLRLRR
Trigger: CCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCT...CAACCTCAGCAGCAACCAGATCACGGAGCTGTCCCTGTGCATAGACCAGTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581401.1
ENST00000639036.1
ENST00000639299.1
CDS-3UTR CAA 90 bp CCAGCCCATATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAATCCAGGTTGGTGAGCTaGCCAATGCCTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PAHIGGFTALPEVHDALESRLVS*PMPEGS
Trigger: GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGA...TTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAATATGGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTTCCAGGTTGGTGAGCTaGCCAATGCCTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SHCGESWISQTPEGTCQGSRLVS*PMPEGS
Trigger: GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGA...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCTCCAGGTTGGTGAGCTaGCCAATGCCTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVSRLVS*PMPEGS
Trigger: GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGA...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGAGCTCCAGGTTGTTGTaGGCAGCCATGAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRSSRLL*AAMNSS
Trigger: GGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCT...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGAAGCTCCAGGTTGTTGTaGGCAGCCATGAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: QAGEGVQTLGHPCQVIAGSSRLL*AAMNSS
Trigger: GGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCT...TCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGGCGGCATGACCAGGTaGGGGTTCTCCCGCACATCC +
Preference number: 5 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTGGMTR*GFSRTS
Trigger: GGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCC...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CAGCTTGATCTCCACCTGGCTAGTCTGGGTCCCCACCCACATGTAGACCTCTTGCTCCGCAGTCGCATCTaGCGAGCCATAGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: QLDLHLASLGPHPHVDLLLRSRI*RAIGSL
Trigger: CAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAG...CAAGAGGTCTACATGTGGGTGGGGACCCAGACTAGCCAGGTGGAGATCAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTCTCCGCAGTCGCATCTaGCGAGCCATAGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGLRSRI*RAIGSL
Trigger: CAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAG...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CCTCTTGAAATGGGACAGGAACTTGGGGTTCTCCTGCTGCTGCGTCATGCGTACTCCTGGGCTGAATCCTaGCGCCTCCGCAGTCGCATC +
Preference number: 5 (lower is better)
Translates to: PLEMGQELGVLLLLRHAYSWAES*RLRSRI
Trigger: GATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGA...GTACGCATGACGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTTCAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCGCAGAGCAAGCTTTCTaGTCGAGTGTGGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVAEQAF*SSVASP
Trigger: CGGGGAGGCCACACTCGACAAGAAAGCTTGCTCTGC...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGCAAAGAGCCTGGCCTaGGTGGTGCTGCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: HTCTHTVERVGFPRPLRAAKSLA*VVLLSV
Trigger: CACACTGAGCAGCACCACCAAGGCCAGGCTCTTTGC...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCGCAAAGAGCCTGGCCTaGGTGGTGCTGCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCAKSLA*VVLLSV
Trigger: CACACTGAGCAGCACCACCAAGGCCAGGCTCTTTGC...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTTCAGGCACGTGCTTCTaGATCTCAGAGGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTSGTCF*ISEGSP
Trigger: TGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGA...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGCCCACCTTGTACAGCTaGGGCTGCGGCGGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMPTLYS*GCGGQK
Trigger: CTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGGG...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAAGCCCAGGCCCACCTaGTACAGCTTGGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: VTRWFLFRTSFLSFGHLQKPRPT*YSLGCG
Trigger: GCCGCAGCCCAAGCTGTACAAGGTGGGCCTGGGCTT...CTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCGGCATCAGCTCCACCTaGGGACGCTGCTTATGTTCC +
Preference number: 5 (lower is better)
Translates to: GGFTRALTLWRELDFPDPGISST*GRCLCS
Trigger: GGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGCC...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp GCAGAACTCGGAGTTGAGGAGGCTGGAGTCGGTGTTGATCTGGATGCACCGGGTGGCATCAGCTCCACCTaGGGACGCTGCTTATGTTCC +
Preference number: 5 (lower is better)
Translates to: AELGVEEAGVGVDLDAPGGISST*GRCLCS
Trigger: GGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGCC...ACCCGGTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGCAGCAGCCGCATTCTaGGCATCAGCTCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERAAAAF*ASAPPW
Trigger: CCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTGC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp CGGCGCAGGCTGGGGAGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGACATCGTCCCAATTCTaGAACTTGGCCTTGAACACC +
Preference number: 5 (lower is better)
Translates to: RRRLGRVYRHSGTRVRSLTSSQF*NLALNT
Trigger: GGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGT...CAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCTCCCCAGCCTGCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTAGCCGCGCAAACTTCTaGCCCTCCAGCACGAAACCC +
Preference number: 5 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILSRANF*PSSTKP
Trigger: GGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGCT...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTAGCCGCGCAAACTTCTaGCCCTCCAGCACGAAACCC +
Preference number: 5 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGSRANF*PSSTKP
Trigger: GGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGCT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCTCTGCCTCAGCGGTaGCTTCCTCGCCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIPLPQR*LPRLLC
Trigger: GCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGG...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGTGAGCCAGCCCATATaGGAGGCTTCACGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFVSQPI*EASRPC
Trigger: GCAGGGCCGTGAAGCCTCCAATATGGGCTGGCTCAC...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTAAATGGGACAGGAACTaGGGGTTCTCCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAAKWDRN*GFSCCC
Trigger: GCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTT...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGAAATGGGACAGGAACTaGGGGTTCTCCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLKWDRN*GFSCCC
Trigger: GCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTT...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGAAATGGGACAGGAACTaGGGGTTCTCCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVKWDRN*GFSCCC
Trigger: GCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTT...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTTGGACCGCCTTCCTCTaGCCCCGGTGGATGATGAAC +
Preference number: 5 (lower is better)
Translates to: SHCGESWISQTPEGTCQGWTAFL*PRWMMN
Trigger: GTTCATCATCCACCGGGGCAAGAGGAAGGCGGTCCA...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCTGGACCGCCTTCCTCTaGCCCCGGTGGATGATGAAC +
Preference number: 5 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPWTAFL*PRWMMN
Trigger: GTTCATCATCCACCGGGGCAAGAGGAAGGCGGTCCA...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCTGGACCGCCTTCCTCTaGCCCCGGTGGATGATGAAC +
Preference number: 5 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCWTAFL*PRWMMN
Trigger: GTTCATCATCCACCGGGGCAAGAGGAAGGCGGTCCA...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCTGGACCGCCTTCCTCTaGCCCCGGTGGATGATGAAC +
Preference number: 5 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIWTAFL*PRWMMN
Trigger: GTTCATCATCCACCGGGGCAAGAGGAAGGCGGTCCA...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGCCTTCAGGCTCAGCTaGATCTCCACCTGGCTAGTC +
Preference number: 5 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALAFRLS*ISTWLV
Trigger: GACTAGCCAGGTGGAGATCAAGCTGAGCCTGAAGGC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp GGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATTGCAGGACAGATCCACGTGCCTTCAGGCTCAGCTaGATCTCCACCTGGCTAGTC +
Preference number: 5 (lower is better)
Translates to: GCTDTRAPVSGHCRTDPRAFRLS*ISTWLV
Trigger: GACTAGCCAGGTGGAGATCAAGCTGAGCCTGAAGGC...ACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHCCSLP*RTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCA...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAGCTGGGAGCTGCCTGTaGTGGCTGAGGTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRAGSCL*WLRFST
Trigger: GGTGCTGAACCTCAGCCACAACAGGCAGCTCCCAGC...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545457.6
ENST00000638404.1
CDS-3UTR CAA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTGAATTCTTCAGACTGTaGGCTCGGGCCACGATGGCG +
Preference number: 5 (lower is better)
Translates to: SHCGESWISQTPEGTCQGEFFRL*ARATMA
Trigger: CGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTC...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGAATTCTTCAGACTGTaGGCTCGGGCCACGATGGCG +
Preference number: 5 (lower is better)
Translates to: IPSGRVRGLHTCTHTVEREFFRL*ARATMA
Trigger: CGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGATGGTGTCGATGCTGTaGTGGCTGAGGTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALMVSML*WLRFST
Trigger: GGTGCTGAACCTCAGCCACAACAGCATCGACACCAT...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCATGGTGTCGATGCTGTaGTGGCTGAGGTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: GGFTRALTLWRELDFPDPMVSML*WLRFST
Trigger: GGTGCTGAACCTCAGCCACAACAGCATCGACACCAT...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR CAA 90 bp ACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGTTGATGAAGAGCTGGTaGGGGATGGTGTCGATGCTG +
Preference number: 5 (lower is better)
Translates to: TPEGTCQGHPHWCCLRLLLMKSW*GMVSML
Trigger: CAGCATCGACACCATCCCCAACCAGCTCTTCATCAA...CAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGAGTAGGTCAGTGAGGTaGATGAAGAGCTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GAAAHVPWTACAGYIPGRSRSVR*MKSWLG
Trigger: CCCCAACCAGCTCTTCATCAACCTCACTGACCTACT...CCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGCCTTCAGAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PLMFLGPHVLDIYLAGLQSRGFP*STSVCR
Trigger: CCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCT...CTGAAGGCCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTAGGCTGGTGGGCAGGTaGCTCTGGGTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLRLVGR*LWVRWV
Trigger: CACCCAGCGCACCCAGAGCAACCTGCCCACCAGCCT...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QVVVGSHELFQVGELANASTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: DGFWEGHQVVLVQDKFPQSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...CTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLTRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCTRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGAGCTCCGTGATCTGGTaGCTGCTGAGGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWSSVIW*LLRLRR
Trigger: CCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCT...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCTCCGTGATCTGGTaGCTGCTGAGGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGSSVIW*LLRLRR
Trigger: CCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCT...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CGAGAAGTCGATGTTGTACCACTCAGCGGCACGGTCTGCGGGCTTGGGCGGCATCCGTCAAAGTCCAGCTaGTTGGAATTCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: REVDVVPLSGTVCGLGRHPSKSS*LEFRYS
Trigger: GCTGTACCTGAATTCCAACAAGCTGGACTTTGACGG...ATGCCGCCCAAGCCCGCAGACCGTGCCGCTGAGTGGTACAACATCGACTTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTCCAGGTTGGTGAGCTaGCCAATGCCTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQSRLVS*PMPEGS
Trigger: GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGA...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTTCCAGGTTGGTGAGCTaGCCAATGCCTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFASRLVS*PMPEGS
Trigger: GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGA...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACTCCAGGTTGGTGAGCTaGCCAATGCCTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHSRLVS*PMPEGS
Trigger: GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGA...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCTCCAGGTTGGTGAGCTaGCCAATGCCTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGSRLVS*PMPEGS
Trigger: GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGA...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCACGGTCTGCGGGCTaGGGCGGCATGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQARSAG*GGMTRL
Trigger: CAACCTGGTCATGCCGCCCAAGCCCGCAGACCGTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAAGCGAGAAGTCGATGTaGTACCACTCAGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: HTCTHTVERVGFPRPLRASEKSM*YHSAAR
Trigger: CCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCT...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTAGCGAGAAGTCGATGTaGTACCACTCAGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGSEKSM*YHSAAR
Trigger: CCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTTCCTGGGCTGAATCCTaGCGCCTCCGCAGTCGCATC +
Preference number: 5 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTSWAES*RLRSRI
Trigger: GATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGA...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGCAGAGCAAGCTTTCTaGTCGAGTGTGGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVAEQAF*SSVASP
Trigger: CGGGGAGGCCACACTCGACAAGAAAGCTTGCTCTGC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTGCAGAGCAAGCTTTCTaGTCGAGTGTGGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAAEQAF*SSVASP
Trigger: CGGGGAGGCCACACTCGACAAGAAAGCTTGCTCTGC...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTTCCAGAGAGGTCCCCTaGAGGGGCACAGGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTSREVP*RGTGSN
Trigger: GTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGGA...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCGCAGGAAAACAAACCTaGGGTCCAGAGAGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: HVHSHCGESWISQTPEGTAGKQT*GPERSP
Trigger: AGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTGC...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGGCAGGAAAACAAACCTaGGGTCCAGAGAGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALAGKQT*GPERSP
Trigger: AGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTGC...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCGCAGGAAAACAAACCTaGGGTCCAGAGAGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCAGKQT*GPERSP
Trigger: AGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTGC...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCAGGAAAACAAACCTaGGGTCCAGAGAGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGAAGKQT*GPERSP
Trigger: AGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTGC...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCTCAGGCACGTGCTTCTaGATCTCAGAGGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: TVERVGFPRPLRAPVRVISGTCF*ISEGSP
Trigger: TGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGA...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTCAGGCACGTGCTTCTaGATCTCAGAGGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILSGTCF*ISEGSP
Trigger: TGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGA...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCGGCATCAGCTCCACCTaGGGACGCTGCTTATGTTCC +
Preference number: 5 (lower is better)
Translates to: GTGRGWSRWCHLSTFFASGISST*GRCLCS
Trigger: GGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGCC...GCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCGGCATCAGCTCCACCTaGGGACGCTGCTTATGTTCC +
Preference number: 5 (lower is better)
Translates to: SHVHSHCGESWISQTPEGGISST*GRCLCS
Trigger: GGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGCC...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTGCAGCAGCCGCATTCTaGGCATCAGCTCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAAAAAF*ASAPPW
Trigger: CCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTGC...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAACCAGGCGCGGGGACTaGCGGCCGAGCCAGATGAAC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQTRRGD*RPSQMN
Trigger: GTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGTTCTTGAACTTGGCCTaGAACACCTGCGCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLFLNLA*NTCASV
Trigger: CACCGAGGCGCAGGTGTTCAAGGCCAAGTTCAAGAA...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGTTCTTGAACTTGGCCTaGAACACCTGCGCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALFLNLA*NTCASV
Trigger: CACCGAGGCGCAGGTGTTCAAGGCCAAGTTCAAGAA...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCTCCCAATTCTTGAACTaGGCCTTGAACACCTGCGCC +
Preference number: 5 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPSQFLN*ALNTCA
Trigger: GGCGCAGGTGTTCAAGGCCAAGTTCAAGAATTGGGA...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCTCTGCCTCAGCGGTaGCTTCCTCGCCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRPLPQR*LPRLLC
Trigger: GCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGG...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp CCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGCCTTCAGCCTCTGCCTCAGCGGTaGCTTCCTCGCCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: PLMFLGPHVLDIYLAGLQPLPQR*LPRLLC
Trigger: GCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGG...CTGAAGGCCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGGTGAGCCAGCCCATATaGGAGGCTTCACGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMVSQPI*EASRPC
Trigger: GCAGGGCCGTGAAGCCTCCAATATGGGCTGGCTCAC...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGTAGAGGCTGGGCTGTaGGGCGCCCTGGACCGCCTT +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQVEAGL*GALDRL
Trigger: AAGGCGGTCCAGGGCGCCCAACAGCCCAGCCTCTAC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACAGGCTGGAGTCGGTGTaGATCTGGATGCACCGGGTG +
Preference number: 5 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHRLESV*IWMHRV
Trigger: CACCCGGTGCATCCAGATCAACACCGACTCCAGCCT...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGCCTTCAGGCTCAGCTaGATCTCCACCTGGCTAGTC +
Preference number: 5 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERAFRLS*ISTWLV
Trigger: GACTAGCCAGGTGGAGATCAAGCTGAGCCTGAAGGC...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQCCSLP*RTRRSR
Trigger: CCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: HVHSHCGESWISQTPEGTSGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: GGFTRALTLWRELDFPDPSGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTSGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: VGFPRPLRAPVRVIPIGASGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...AGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCSGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACAGGGGACAGCGAGCCTaGGGTGATGACCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHRGQRA*GDDPAL
Trigger: CAGGGCAGGGTCATCACCCAAGGCTCGCTGTCCCCT...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS-3UTR CAA 90 bp AACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAAGTCCACCATCTTGAAGTCGTaGCCGCTGAGGTCCACGCCA +
Preference number: 5 (lower is better)
Translates to: NSSRLVSLPMPEGSPSKSTILKS*PLRSTP
Trigger: TGGCGTGGACCTCAGCGGCAACGACTTCAAGATGGT...GGACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAATTCTTCAGACTGTaGGCTCGGGCCACGATGGCG +
Preference number: 5 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVEFFRL*ARATMA
Trigger: CGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTC...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCCACTCTGTCAGCTGGTaGTGGCTCAAGTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCHSVSW*WLKSRT
Trigger: AGTCCTGGACTTGAGCCACAACCAGCTGACAGAGTG...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCACTCTGTCAGCTGGTaGTGGCTCAAGTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPHSVSW*WLKSRT
Trigger: AGTCCTGGACTTGAGCCACAACCAGCTGACAGAGTG...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCCACTCTGTCAGCTGGTaGTGGCTCAAGTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVHSVSW*WLKSRT
Trigger: AGTCCTGGACTTGAGCCACAACCAGCTGACAGAGTG...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTATGGTGTCGATGCTGTaGTGGCTGAGGTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILMVSML*WLRFST
Trigger: GGTGCTGAACCTCAGCCACAACAGCATCGACACCAT...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCATGGTGTCGATGCTGTaGTGGCTGAGGTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVMVSML*WLRFST
Trigger: GGTGCTGAACCTCAGCCACAACAGCATCGACACCAT...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCAGTAGGTCAGTGAGGTaGATGAAGAGCTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCSRSVR*MKSWLG
Trigger: CCCCAACCAGCTCTTCATCAACCTCACTGACCTACT...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GATCTCCACCTGGCTAGTCTGGGTCCCCACCCACATGTAGACCTCTTGGCCATTACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: DLHLASLGPHPHVDLLAITRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...AATGGCCAAGAGGTCTACATGTGGGTGGGGACCCAGACTAGCCAGGTGGAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: SHCGESWISQTPEGTCQGTRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGAGCTCCGTGATCTGGTaGCTGCTGAGGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: HQVVLVQDKFPQLWAPAESSVIW*LLRLRR
Trigger: CCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCT...CTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCCCGTCAAAGTCCAGCTaGTTGGAATTCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: VERVGFPRPLRAPVRVIPPSKSS*LEFRYS
Trigger: GCTGTACCTGAATTCCAACAAGCTGGACTTTGACGG...GGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GCAGTCAGCCTCGTAGAACTTGCCGTGGAAGGCTTCCTCCACCAGCACAGGCACCCGTCAAAGTCCAGCTaGTTGGAATTCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: AVSLVELAVEGFLHQHRHPSKSS*LEFRYS
Trigger: GCTGTACCTGAATTCCAACAAGCTGGACTTTGACGG...GTGCCTGTGCTGGTGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTAGCTCCAGGTTGTTGTaGGCAGCCATGAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTSSRLL*AAMNSS
Trigger: GGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCT...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTGAGCTCCAGGTTGTTGTaGGCAGCCATGAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: CQGHPHWCCLRLLGTVALSSRLL*AAMNSS
Trigger: GGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCT...CAGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGTGCATGCAGCAGGGGGTTTCCATTGAGCACGAGCGTCTGCAGGTGCACCAGGGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: CACSRGFPLSTSVCRCTRVTRWF*FRTSFL
Trigger: GAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC...CCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTGGCGGCATGACCAGGTaGGGGTTCTCCCGCACATCC +
Preference number: 5 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLGGMTR*GFSRTS
Trigger: GGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCC...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGCGGCATGACCAGGTaGGGGTTCTCCCGCACATCC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGGMTR*GFSRTS
Trigger: GGATGTGCGGGAGAACCCCAACCTGGTCATGCCGCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGAGCGAGAAGTCGATGTaGTACCACTCAGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: ASHVHSHCGESWISQTPESEKSM*YHSAAR
Trigger: CCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCT...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACGAGCCATAGGGTCCTaGGGCCCACTCCCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRAIGS*GPLPAA
Trigger: AGCTGCAGGGAGTGGGCCCAAGGACCCTATGGCTCG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGCAGAGCAAGCTTTCTaGTCGAGTGTGGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTAEQAF*SSVASP
Trigger: CGGGGAGGCCACACTCGACAAGAAAGCTTGCTCTGC...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAAGTCCTCCTCGCAGGAAAACAAACCTaGGGTCCAGAGAGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: IGGFTALPEVHDALEVLLAGKQT*GPERSP
Trigger: AGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTGC...GAGGAGGACTTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGTCAGGCACGTGCTTCTaGATCTCAGAGGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWSGTCF*ISEGSP
Trigger: TGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGA...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCCACCTTGTACAGCTaGGGCTGCGGCGGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPTLYS*GCGGQK
Trigger: CTTCTGGCCGCCGCAGCCCAAGCTGTACAAGGTGGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAAGCCCAGGCCCACCTaGTACAGCTTGGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQKPRPT*YSLGCG
Trigger: GCCGCAGCCCAAGCTGTACAAGGTGGGCCTGGGCTT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACGGCATCAGCTCCACCTaGGGACGCTGCTTATGTTCC +
Preference number: 5 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHGISST*GRCLCS
Trigger: GGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGCC...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTGCAGCAGCCGCATTCTaGGCATCAGCTCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTAAAAF*ASAPPW
Trigger: CCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTGC...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCTTCTTGAACTTGGCCTaGAACACCTGCGCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVFLNLA*NTCASV
Trigger: CACCGAGGCGCAGGTGTTCAAGGCCAAGTTCAAGAA...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGTCCCAATTCTTGAACTaGGCCTTGAACACCTGCGCC +
Preference number: 5 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLSQFLN*ALNTCA
Trigger: GGCGCAGGTGTTCAAGGCCAAGTTCAAGAATTGGGA...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTAGCCGCGCAAACTTCTaGCCCTCCAGCACGAAACCC +
Preference number: 5 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTSRANF*PSSTKP
Trigger: GGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGCT...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGGACCGCCTTCCTCTaGCCCCGGTGGATGATGAAC +
Preference number: 5 (lower is better)
Translates to: QVVVGSHELFQVGELANAWTAFL*PRWMMN
Trigger: GTTCATCATCCACCGGGGCAAGAGGAAGGCGGTCCA...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CCTTCTCGTTGGAGCACCGGAAGAGACGTGTGTGTTTCATGTACTCGGCATCGTAGGCTGGAGTCGGTGTaGATCTGGATGCACCGGGTG +
Preference number: 5 (lower is better)
Translates to: PSRWSTGRDVCVSCTRHRRLESV*IWMHRV
Trigger: CACCCGGTGCATCCAGATCAACACCGACTCCAGCCT...ACGATGCCGAGTACATGAAACACACACGTCTCTTCCGGTGCTCCAACGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTAGGCTGGAGTCGGTGTaGATCTGGATGCACCGGGTG +
Preference number: 5 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFRLESV*IWMHRV
Trigger: CACCCGGTGCATCCAGATCAACACCGACTCCAGCCT...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp GGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTGGCAGGATGTCTTCTGCCAACTaGGCTTCGTCAGGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: GAAAHVPWTACAGYIPGRMSSAN*ASSGSD
Trigger: ATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACAT...CCTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPSGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: SHVHSHCGESWISQTPEGSGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGCCCATGGGAGCCTTaGGGGAGCCACAGAACCAAC +
Preference number: 5 (lower is better)
Translates to: VTRWFLFRTSFLSFGHLQSPWEP*GSHRTN
Trigger: GTTGGTTCTGTGGCTCCCCAAAGGCTCCCATGGGCT...CTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TGGGCACCTGCAGAGACTTTCAGGGACCAGCTCCAGGTTGTTGTTGGCAGCCATCCAACTCTCACCATCTaGAAGTCGTTGCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: WAPAETFRDQLQVVVGSHPTLTI*KSLPLR
Trigger: CCTCAGCGGCAACGACTTCAAGATGGTGAGAGTTGG...ATGGCTGCCAACAACAACCTGGAGCTGGTCCCTGAAAGTCTCTGCAGGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS CCA 90 bp ATGAAGCAGAACTCGGAGTTGAGGAGGCTGGAGTCGGTGTTGATCTaGATGCACCTGTGGAAGGGATGGGGCATCAGCAAGGATTCAGGC +
Preference number: 5 (lower is better)
Translates to: MKQNSELRRLESVLI*MHLWKGWGISKDSG
Trigger: GCCTGAATCCTTGCTGATGCCCCATCCCTTCCACAGGTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474265.5
ENST00000580966.1
ENST00000638833.1
ENST00000640241.1
CDS-3UTR CAA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTAGCGTGGTCAGGTTGTaGTGGCTCACAGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGSVVRL*WLTDKC
Trigger: ACACTTGTCTGTGAGCCACAACAACCTGACCACGCT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAAGCGTGGTCAGGTTGTaGTGGCTCACAGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: HTCTHTVERVGFPRPLRASVVRL*WLTDKC
Trigger: ACACTTGTCTGTGAGCCACAACAACCTGACCACGCT...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGTAGCAGTCAGCCTCGTAGAACTTGCCGTGGAAGGCTTCCTCCACCAGCACAGAGCGTGGTCAGGTTGTaGTGGCTCACAGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: CSSQPRRTCRGRLPPPAQSVVRL*WLTDKC
Trigger: ACACTTGTCTGTGAGCCACAACAACCTGACCACGCT...CTGTGCTGGTGGAGGAAGCCTTCCACGGCAAGTTCTACGAGGCTGACTGCTACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTAGCGTGGTCAGGTTGTaGTGGCTCACAGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILSVVRL*WLTDKC
Trigger: ACACTTGTCTGTGAGCCACAACAACCTGACCACGCT...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGTTGATGAAGAGCTGGTaGGGGATGGTGTCGATGCTG +
Preference number: 5 (lower is better)
Translates to: THTVERVGFPRPLRAPVRLMKSW*GMVSML
Trigger: CAGCATCGACACCATCCCCAACCAGCTCTTCATCAA...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCATTGATGAAGAGCTGGTaGGGGATGGTGTCGATGCTG +
Preference number: 5 (lower is better)
Translates to: HTCTHTVERVGFPRPLRALMKSW*GMVSML
Trigger: CAGCATCGACACCATCCCCAACCAGCTCTTCATCAA...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTAGTAGGTCAGTGAGGTaGATGAAGAGCTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILSRSVR*MKSWLG
Trigger: CCCCAACCAGCTCTTCATCAACCTCACTGACCTACT...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGTAGGTCAGTGAGGTaGATGAAGAGCTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVSRSVR*MKSWLG
Trigger: CCCCAACCAGCTCTTCATCAACCTCACTGACCTACT...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAGTAGGTCAGTGAGGTaGATGAAGAGCTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SHVHSHCGESWISQTPEGSRSVR*MKSWLG
Trigger: CCCCAACCAGCTCTTCATCAACCTCACTGACCTACT...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR CAA 90 bp GCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ASGRVTRWFLFRTSFLSFSRGFP*STSVCR
Trigger: CCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCT...AAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GTAGTCCACCGTCAACACATCGTCCCAATTCTTGAACTTGGCCTTGAACACCTGTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VVHRQHIVPILELGLEHLSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...CAGGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGTGTTGACGGTGGACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: HICFIPSGRVRGLHTCTHTRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...GTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWTRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGTCAAAGTCCAGCTTGTaGGAATTCAGGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: SQTPEGTCQGHPHWCCLRSKSSL*EFRYSF
Trigger: GAAGCTGTACCTGAATTCCAACAAGCTGGACTTTGA...CCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCACCGTCAAAGTCCAGCTaGTTGGAATTCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: AMNSSRLVSLPMPEGSPSPSKSS*LEFRYS
Trigger: GCTGTACCTGAATTCCAACAAGCTGGACTTTGACGG...TGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTTCCAGGTTGGTGAGCTaGCCAATGCCTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: ASGRVTRWFLFRTSFLSFSRLVS*PMPEGS
Trigger: GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGA...AAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAATGAACTCTTCCAGGTaGGTGAGCTTGCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: AMNSSRLVSLPMPEGSPSMNSSR*VSLPMP
Trigger: AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCAT...TGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAAGTCCAGCTCCAGGTTGTTGTaGGCAGCCATGAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: NSSRLVSLPMPEGSPSKSSSRLL*AAMNSS
Trigger: GGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCT...GGACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTAGCTCCAGGTTGTTGTaGGCAGCCATGAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: SHCGESWISQTPEGTCQGSSRLL*AAMNSS
Trigger: GGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCT...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCAAGCTCCAGGTTGTTGTaGGCAGCCATGAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: HTCTHTVERVGFPRPLRASSRLL*AAMNSS
Trigger: GGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCT...TGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGGGCACCTGCAGAGACTTTCAGGGACCAGCTCCAGGTTGTTGTTGGCAGCCATAGCTCCAGGTTGTTGTaGGCAGCCATGAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: WAPAETFRDQLQVVVGSHSSRLL*AAMNSS
Trigger: GGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCT...ATGGCTGCCAACAACAACCTGGAGCTGGTCCCTGAAAGTCTCTGCAGGTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCCTGGGCTGAATCCTaGCGCCTCCGCAGTCGCATC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSWAES*RLRSRI
Trigger: GATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCCAGAGAGGTCCCCTaGAGGGGCACAGGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSREVP*RGTGSN
Trigger: GTTGGAGCCTGTGCCCCTCAAGGGGACCTCTCTGGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGGCAAAGAGCCTGGCCTaGGTGGTGCTGCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRAKSLA*VVLLSV
Trigger: CACACTGAGCAGCACCACCAAGGCCAGGCTCTTTGC...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTTCAGGCACGTGCTTCTaGATCTCAGAGGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTSGTCF*ISEGSP
Trigger: TGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGA...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGGCAGCAGCCGCATTCTaGGCATCAGCTCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRAAAAF*ASAPPW
Trigger: CCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTGC...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTTCCCAATTCTTGAACTaGGCCTTGAACACCTGCGCC +
Preference number: 5 (lower is better)
Translates to: GASHVHSHCGESWISQTPSQFLN*ALNTCA
Trigger: GGCGCAGGTGTTCAAGGCCAAGTTCAAGAATTGGGA...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGTCCCAATTCTTGAACTaGGCCTTGAACACCTGCGCC +
Preference number: 5 (lower is better)
Translates to: THTVERVGFPRPLRAPVRSQFLN*ALNTCA
Trigger: GGCGCAGGTGTTCAAGGCCAAGTTCAAGAATTGGGA...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTACATCGTCCCAATTCTaGAACTTGGCCTTGAACACC +
Preference number: 5 (lower is better)
Translates to: GFPRPLRAPVRVIPIGAATSSQF*NLALNT
Trigger: GGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGT...AGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TACACGATGCCCTGGTTGTCCTCACTCTCAAAGGGAACCTTGAGGATGAAGCAGAGCCGCGCAAACTTCTaGCCCTCCAGCACGAAACCC +
Preference number: 5 (lower is better)
Translates to: YTMPWLSSLSKGTLRMKQSRANF*PSSTKP
Trigger: GGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGCT...CTGCTTCATCCTCAAGGTTCCCTTTGAGAGTGAGGACAACCAGGGCATCGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGTGAGCCAGCCCATATaGGAGGCTTCACGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQVSQPI*EASRPC
Trigger: GCAGGGCCGTGAAGCCTCCAATATGGGCTGGCTCAC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCGCTCTCGAACTTCTTTaGCAGGCTGAAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: HVHSHCGESWISQTPEGTALELL*QAEGEG
Trigger: ACCTTCACCTTCAGCCTGCAAAAGAAGTTCGAGAGC...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCGCTCTCGAACTTCTTTaGCAGGCTGAAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: GGFTRALTLWRELDFPDPALELL*QAEGEG
Trigger: ACCTTCACCTTCAGCCTGCAAAAGAAGTTCGAGAGC...GGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGGCTCTCGAACTTCTTTaGCAGGCTGAAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLALELL*QAEGEG
Trigger: ACCTTCACCTTCAGCCTGCAAAAGAAGTTCGAGAGC...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATCTCTCAAAGGGAACCTaGAGGATGAAGCAGAACTCG +
Preference number: 5 (lower is better)
Translates to: GESWISQTPEGTCQGHPHLSKGT*RMKQNS
Trigger: CGAGTTCTGCTTCATCCTCAAGGTTCCCTTTGAGAG...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCCTCTCAAAGGGAACCTaGAGGATGAAGCAGAACTCG +
Preference number: 5 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCLSKGT*RMKQNS
Trigger: CGAGTTCTGCTTCATCCTCAAGGTTCCCTTTGAGAG...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGCTCTCAAAGGGAACCTaGAGGATGAAGCAGAACTCG +
Preference number: 5 (lower is better)
Translates to: ISQTPEGTCQGHPHWCCLLSKGT*RMKQNS
Trigger: CGAGTTCTGCTTCATCCTCAAGGTTCCCTTTGAGAG...CAAGCAGCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCATGTCTTCTGCCAACTaGGCTTCGTCAGGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCMSSAN*ASSGSD
Trigger: ATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACAT...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CAA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATATGTCTTCTGCCAACTaGGCTTCGTCAGGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: GESWISQTPEGTCQGHPHMSSAN*ASSGSD
Trigger: ATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACAT...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CAA 90 bp GCAGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTGGATATATACCTATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: AAGAAAHVPWTACAGYIPICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...AGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000581858.5
ENST00000639036.1
ENST00000640412.1
CDS-3UTR CAA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGGCCTTCAGGCTCAGCTaGATCTCCACCTGGCTAGTC +
Preference number: 5 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMAFRLS*ISTWLV
Trigger: GACTAGCCAGGTGGAGATCAAGCTGAGCCTGAAGGC...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: ASHVHSHCGESWISQTPESGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGAGCACCGGAAGAGACAGCCCATGGGAGCCTTaGGGGAGCCACAGAACCAAC +
Preference number: 5 (lower is better)
Translates to: SISQSLQSSPSRWSTGRDSPWEP*GSHRTN
Trigger: GTTGGTTCTGTGGCTCCCCAAAGGCTCCCATGGGCT...GTCTCTTCCGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTCCAACTCTCACCATCTaGAAGTCGTTGCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFPTLTI*KSLPLR
Trigger: CCTCAGCGGCAACGACTTCAAGATGGTGAGAGTTGG...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACAGCGTGGTCAGGTTGTaGTGGCTCACAGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: FRDRFRVSTCTHWSMHRDSVVRL*WLTDKC
Trigger: ACACTTGTCTGTGAGCCACAACAACCTGACCACGCT...GTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGAGCGTGGTCAGGTTGTaGTGGCTCACAGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVSVVRL*WLTDKC
Trigger: ACACTTGTCTGTGAGCCACAACAACCTGACCACGCT...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACTCTGTCAGCTGGTaGTGGCTCAAGTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTHSVSW*WLKSRT
Trigger: AGTCCTGGACTTGAGCCACAACCAGCTGACAGAGTG...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCACTCTGTCAGCTGGTaGTGGCTCAAGTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFHSVSW*WLKSRT
Trigger: AGTCCTGGACTTGAGCCACAACCAGCTGACAGAGTG...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGCACCAGCATGTTCTaGGCGTTCTCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSTSMF*AFSSSR
Trigger: GCGGGAGCTGGAGAACGCCAAGAACATGCTGGTGCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTTGATGAAGAGCTGGTaGGGGATGGTGTCGATGCTG +
Preference number: 5 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQLMKSW*GMVSML
Trigger: CAGCATCGACACCATCCCCAACCAGCTCTTCATCAA...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000638207.2
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSRGFP*STSVCR
Trigger: CCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CCCTTTCCGCTCATTCTTGTTAATTTTCTCTGCAAAGAGCCTGGCCTTGGTGGTTCCACGTCTGCGAGGTaGCTCAGACCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PFPLILVNFLCKEPGLGGSTSAR*LRPSRL
Trigger: CAGCCTGGAGGGTCTGAGCAACCTCGCAGACGTGGA...ACCACCAAGGCCAGGCTCTTTGCAGAGAAAATTAACAAGAATGAGCGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: QVVVGSHELFQVGELANATRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: GHQVVLVQDKFPQLWAPATRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...TGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGCTCCGTGATCTGGTaGCTGCTGAGGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSSVIW*LLRLRR
Trigger: CCGCCTCAACCTCAGCAGCAACCAGATCACGGAGCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCACCTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGTCAAAGTCCAGCTTGTaGGAATTCAGGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: GTCQGHPHWCCLRLLGTVSKSSL*EFRYSF
Trigger: GAAGCTGTACCTGAATTCCAACAAGCTGGACTTTGA...CACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGACCGTCAAAGTCCAGCTaGTTGGAATTCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: SGRVRGLHTCTHTVERVGPSKSS*LEFRYS
Trigger: GCTGTACCTGAATTCCAACAAGCTGGACTTTGACGG...TCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCCGTCAAAGTCCAGCTaGTTGGAATTCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: THTVERVGFPRPLRAPVRPSKSS*LEFRYS
Trigger: GCTGTACCTGAATTCCAACAAGCTGGACTTTGACGG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCCCGTCAAAGTCCAGCTaGTTGGAATTCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: SHVHSHCGESWISQTPEGPSKSS*LEFRYS
Trigger: GCTGTACCTGAATTCCAACAAGCTGGACTTTGACGG...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCCAGGTTGGTGAGCTaGCCAATGCCTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSRLVS*PMPEGS
Trigger: GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGATGAACTCTTCCAGGTaGGTGAGCTTGCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: THTVERVGFPRPLRAPVRMNSSR*VSLPMP
Trigger: AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCAT...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCATGAACTCTTCCAGGTaGGTGAGCTTGCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: LAAMNSSRLVSLPMPEGSMNSSR*VSLPMP
Trigger: AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCAT...GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAAGTCCTCCTCATGAACTCTTCCAGGTaGGTGAGCTTGCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: IGGFTALPEVHDALEVLLMNSSR*VSLPMP
Trigger: AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCAT...GAGGAGGACTTCCAGTGCATCGTGTACTTCTGGCAGGGCCGTGAAGCCTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp ACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCATGAACTCTTCCAGGTaGGTGAGCTTGCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: TVERVGFPRPLRAPVRVIMNSSR*VSLPMP
Trigger: AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCAT...GATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTATGAACTCTTCCAGGTaGGTGAGCTTGCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILMNSSR*VSLPMP
Trigger: AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCAT...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTAGCTCCAGGTTGTTGTaGGCAGCCATGAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFSSRLL*AAMNSS
Trigger: GGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCT...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGVTRWF*FRTSFL
Trigger: GAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: THTVERVGFPRPLRAPVRVTRWF*FRTSFL
Trigger: GAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCVTRWF*FRTSFL
Trigger: GAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: SHCGESWISQTPEGTCQGVTRWF*FRTSFL
Trigger: GAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: GLWHWTWLEQVVSPEYILVTRWF*FRTSFL
Trigger: GAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC...AAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACTCCGCAGTCGCATCTaGCGAGCCATAGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLRSRI*RAIGSL
Trigger: CAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCAGAGCAAGCTTTCTaGTCGAGTGTGGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAEQAF*SSVASP
Trigger: CGGGGAGGCCACACTCGACAAGAAAGCTTGCTCTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCAAAGAGCCTGGCCTaGGTGGTGCTGCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAKSLA*VVLLSV
Trigger: CACACTGAGCAGCACCACCAAGGCCAGGCTCTTTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCAGCAGCCGCATTCTaGGCATCAGCTCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAAAAF*ASAPPW
Trigger: CCAAGGTGGAGCTGATGCCAAGAATGCGGCTGCTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGATCCCAATTCTTGAACTaGGCCTTGAACACCTGCGCC +
Preference number: 5 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRSQFLN*ALNTCA
Trigger: GGCGCAGGTGTTCAAGGCCAAGTTCAAGAATTGGGA...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp AGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTGCACATCGTCCCAATTCTaGAACTTGGCCTTGAACACC +
Preference number: 5 (lower is better)
Translates to: SWISQTPEGTCQGHPHWCTSSQF*NLALNT
Trigger: GGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGT...GCACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGCCGCGCAAACTTCTaGCCCTCCAGCACGAAACCC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSRANF*PSSTKP
Trigger: GGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGGCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCTCTGCCTCAGCGGTaGCTTCCTCGCCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPLPQR*LPRLLC
Trigger: GCAAAGAAGGCGAGGAAGCAACCGCTGAGGCAGAGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCGCTCTCGAACTTCTTTaGCAGGCTGAAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: RGLHTCTHTVERVGFPRPALELL*QAEGEG
Trigger: ACCTTCACCTTCAGCCTGCAAAAGAAGTTCGAGAGC...GGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTAAATGGGACAGGAACTaGGGGTTCTCCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFKWDRN*GFSCCC
Trigger: GCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTT...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATGGACCGCCTTCCTCTaGCCCCGGTGGATGATGAAC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQWTAFL*PRWMMN
Trigger: GTTCATCATCCACCGGGGCAAGAGGAAGGCGGTCCA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGGCTGGAGTCGGTGTaGATCTGGATGCACCGGGTG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQRLESV*IWMHRV
Trigger: CACCCGGTGCATCCAGATCAACACCGACTCCAGCCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGCTCTCAAAGGGAACCTaGAGGATGAAGCAGAACTCG +
Preference number: 5 (lower is better)
Translates to: THTVERVGFPRPLRAPVRLSKGT*RMKQNS
Trigger: CGAGTTCTGCTTCATCCTCAAGGTTCCCTTTGAGAG...CCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: HVHSHCGESWISQTPEGTICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...GGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTAAGGCGTGCTGCTCATaGCCCTTGCGGACCAGGCGC +
Preference number: 5 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVKACCS*PLRTRR
Trigger: GCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTT...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTAGCGTGGTCAGGTTGTaGTGGCTCACAGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: IHICFIPSGRVRGLHTCTSVVRL*WLTDKC
Trigger: ACACTTGTCTGTGAGCCACAACAACCTGACCACGCT...AGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGAATTCTTCAGACTGTaGGCTCGGGCCACGATGGCG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQEFFRL*ARATMA
Trigger: CGCCATCGTGGCCCGAGCCAACAGTCTGAAGAATTC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGAGATCATCTAGCTaGAAGATGTCATCGGGGACT +
Preference number: 5 (lower is better)
Translates to: GASHVHSHCGESWISQTPERSSS*KMSSGT
Trigger: AGTCCCCGATGACATCTTCAAGCTAGATGATCTCTC...AGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTGAGAGATCATCTAGCTaGAAGATGTCATCGGGGACT +
Preference number: 5 (lower is better)
Translates to: SHCGESWISQTPEGTCQGERSSS*KMSSGT
Trigger: AGTCCCCGATGACATCTTCAAGCTAGATGATCTCTC...ACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACATGGTGTCGATGCTGTaGTGGCTGAGGTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHMVSML*WLRFST
Trigger: GGTGCTGAACCTCAGCCACAACAGCATCGACACCAT...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000578558.5
ENST00000638207.2
ENST00000640595.1
CDS-3UTR CAA 90 bp CACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGTTGATGAAGAGCTGGTaGGGGATGGTGTCGATGCTG +
Preference number: 5 (lower is better)
Translates to: HQVVLVQDKFPQLWAPAELMKSW*GMVSML
Trigger: CAGCATCGACACCATCCCCAACCAGCTCTTCATCAA...CTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRTRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTTCAAAGTCCAGCTTGTaGGAATTCAGGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTSKSSL*EFRYSF
Trigger: GAAGCTGTACCTGAATTCCAACAAGCTGGACTTTGA...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTCAAAGTCCAGCTTGTaGGAATTCAGGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: GESWISQTPEGTCQGHPHSKSSL*EFRYSF
Trigger: GAAGCTGTACCTGAATTCCAACAAGCTGGACTTTGA...ATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTCCGTCAAAGTCCAGCTaGTTGGAATTCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAPSKSS*LEFRYS
Trigger: GCTGTACCTGAATTCCAACAAGCTGGACTTTGACGG...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GACTGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTATGAACTCTTCCAGGTaGGTGAGCTTGCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: DCGTGRGWSRWCHLSTFFMNSSR*VSLPMP
Trigger: AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCAT...AAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGATGAACTCTTCCAGGTaGGTGAGCTTGCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: CFIPSGRVRGLHTCTHTVMNSSR*VSLPMP
Trigger: AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCAT...CACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGAGCTCCAGGTTGTTGTaGGCAGCCATGAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: HQVVLVQDKFPQLWAPAESSRLL*AAMNSS
Trigger: GGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCT...CTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGACGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: FRDRFRVSTCTHWSMHRDVTRWF*FRTSFL
Trigger: GAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC...GTCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTAGCGAGAAGTCGATGTaGTACCACTCAGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLSEKSM*YHSAAR
Trigger: CCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCT...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGCGAGAAGTCGATGTaGTACCACTCAGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSEKSM*YHSAAR
Trigger: CCGTGCCGCTGAGTGGTACAACATCGACTTCTCGCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGAGCAGGAAAACAAACCTaGGGTCCAGAGAGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: TRWFLFRTSFLSFGHLQRAGKQT*GPERSP
Trigger: AGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTGC...TCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCAGGCACGTGCTTCTaGATCTCAGAGGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSGTCF*ISEGSP
Trigger: TGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGGCATCAGCTCCACCTaGGGACGCTGCTTATGTTCC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQGISST*GRCLCS
Trigger: GGAACATAAGCAGCGTCCCAAGGTGGAGCTGATGCC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGCTCTCGAACTTCTTTaGCAGGCTGAAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: ASHVHSHCGESWISQTPEALELL*QAEGEG
Trigger: ACCTTCACCTTCAGCCTGCAAAAGAAGTTCGAGAGC...CTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp TTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCCTCTCAAAGGGAACCTaGAGGATGAAGCAGAACTCG +
Preference number: 5 (lower is better)
Translates to: LLAAMNSSRLVSLPMPEGLSKGT*RMKQNS
Trigger: CGAGTTCTGCTTCATCCTCAAGGTTCCCTTTGAGAG...GCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGTCTTCTGCCAACTaGGCTTCGTCAGGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: RGWSRWCHLSTFFASRQWMSSAN*ASSGSD
Trigger: ATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACAT...CCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CAA 90 bp TGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: CTHTVERVGFPRPLRAPVICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...GACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCCTTCAGGCTCAGCTaGATCTCCACCTGGCTAGTC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAFRLS*ISTWLV
Trigger: GACTAGCCAGGTGGAGATCAAGCTGAGCCTGAAGGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS-3UTR CAA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHSGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578558.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
ENST00000640412.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCCCGTCAAAGTCCTTCAGCTTGCTCAGCTaGCAAATGGCTGATGGTCTA +
Preference number: 5 (lower is better)
Translates to: NSSRLVSLPMPEGSPSKSFSLLS*QMADGL
Trigger: TAGACCATCAGCCATTTGCAAGCTGAGCAAGCTGAA...GGACTTTGACGGGCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577626.1
ENST00000638796.1
CDS GCA 90 bp ATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTTGGAGCACCTGCTTGCTGTAGGAGG +
Preference number: 5 (lower is better)
Translates to: ICQVILAKVGAFLSH*KVALLVGAPACCRR
Trigger: CCTCCTACAGCAAGCAGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581858.5
ENST00000640412.1
CDS CCA 90 bp AGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGAGCACCTaGGAATCAAGGGTCAAGGTGAGGCCAGAGGTCATAAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SISQSLQSSPSRWST*ESRVKVRPEVISSS
Trigger: ACTGCTGCTTATGACCTCTGGCCTCACCTTGACCCTTGATTCCCAGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465046.1
ENST00000493600.6
ENST00000638497.1
ENST00000639112.1
CDS-3UTR CAA 90 bp TGTGGCACTGGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTGAGAGATCATCTAGCTaGAAGATGTCATCGGGGACT +
Preference number: 5 (lower is better)
Translates to: CGTGRGWSRWCHLSTFFAERSSS*KMSSGT
Trigger: AGTCCCCGATGACATCTTCAAGCTAGATGATCTCTC...AGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCCAGTGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACACTCTGTCAGCTGGTaGTGGCTCAAGTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQHSVSW*WLKSRT
Trigger: AGTCCTGGACTTGAGCCACAACCAGCTGACAGAGTG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAATGGTGTCGATGCTGTaGTGGCTGAGGTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQMVSML*WLRFST
Trigger: GGTGCTGAACCTCAGCCACAACAGCATCGACACCAT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQTRVRS*QDRSTS
Trigger: AGACGTGGATCTGTCCTGCAATGACCTGACACGGGT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGACCCCTGAGGGCTCAAAGTCCAGCTTGTaGGAATTCAGGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: SHVHSHCGESWISQTPEGSKSSL*EFRYSF
Trigger: GAAGCTGTACCTGAATTCCAACAAGCTGGACTTTGA...GCCCTCAGGGGTCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp TTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCTGAGGGCAGCTCAAAGTCCAGCTTGTaGGAATTCAGGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: LAAMNSSRLVSLPMPEGSSKSSL*EFRYSF
Trigger: GAAGCTGTACCTGAATTCCAACAAGCTGGACTTTGA...GCTGCCCTCAGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCTCAAAGTCCAGCTTGTaGGAATTCAGGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: GIHICFIPSGRVRGLHTCSKSSL*EFRYSF
Trigger: GAAGCTGTACCTGAATTCCAACAAGCTGGACTTTGA...GCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTATGAACTCTTCCAGGTaGGTGAGCTTGCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFMNSSR*VSLPMP
Trigger: AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCAT...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp ATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGAATGAACTCTTCCAGGTaGGTGAGCTTGCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: ISGQVQSFHVHPLVYAQGMNSSR*VSLPMP
Trigger: AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCAT...TCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: QVVVGSHELFQVGELANAVTRWF*FRTSFL
Trigger: GAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFVTRWF*FRTSFL
Trigger: GAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGACGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: PGGSCSGQVSSALGTCRDVTRWF*FRTSFL
Trigger: GAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC...GTCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCAGGAAAACAAACCTaGGGTCCAGAGAGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQAGKQT*GPERSP
Trigger: AGGGGACCTCTCTGGACCCAAGGTTTGTTTTCCTGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TGGTTGTGGCTCAAGTCCAGGACTGAGAGATCATCTAGCTTGAAGATGTCATCGTCAGGCACGTGCTTCTaGATCTCAGAGGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: WLWLKSRTERSSSLKMSSSGTCF*ISEGSP
Trigger: TGGGGAGCCCTCTGAGATCAAGAAGCACGTGCCTGA...CGATGACATCTTCAAGCTAGATGATCTCTCAGTCCTGGACTTGAGCCACAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTTTCTTGAACTTGGCCTaGAACACCTGCGCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLFLNLA*NTCASV
Trigger: CACCGAGGCGCAGGTGTTCAAGGCCAAGTTCAAGAA...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATTCTTGAACTTGGCCTaGAACACCTGCGCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQFLNLA*NTCASV
Trigger: CACCGAGGCGCAGGTGTTCAAGGCCAAGTTCAAGAA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGTTCTTGAACTTGGCCTaGAACACCTGCGCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: LGKSRSISQSLQSSPSRWFLNLA*NTCASV
Trigger: CACCGAGGCGCAGGTGTTCAAGGCCAAGTTCAAGAA...CCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTCCCAGAACATCGTCCCAATTCTaGAACTTGGCCTTGAACACC +
Preference number: 5 (lower is better)
Translates to: VRGLHTCTHTVERVGFPRTSSQF*NLALNT
Trigger: GGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGT...TCTGGGAAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGACATCGTCCCAATTCTaGAACTTGGCCTTGAACACC +
Preference number: 5 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQTSSQF*NLALNT
Trigger: GGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGT...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGATGGCTTCTGGGAGGGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTCTCGAACTTCTTTaGCAGGCTGAAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: GWLLGGSPGGSCSGQVSSALELL*QAEGEG
Trigger: ACCTTCACCTTCAGCCTGCAAAAGAAGTTCGAGAGC...TGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACCCTCCCAGAAGCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAAATGGGACAGGAACTaGGGGTTCTCCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQKWDRN*GFSCCC
Trigger: GCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CTGTCAGGGTCATCCCCATTGGTGCTGCTTGAGGCTACTGGGGACTGTGGCACTATGATGAACTTCCTCTaGAAATGGGACAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: LSGSSPLVLLEATGDCGTMMNFL*KWDRNL
Trigger: CAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCAT...AGTGCCACAGTCCCCAGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCACTCTCAAAGGGAACCTaGAGGATGAAGCAGAACTCG +
Preference number: 5 (lower is better)
Translates to: GHQVVLVQDKFPQLWAPALSKGT*RMKQNS
Trigger: CGAGTTCTGCTTCATCCTCAAGGTTCCCTTTGAGAG...TGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTATGTCTTCTGCCAACTaGGCTTCGTCAGGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTMSSAN*ASSGSD
Trigger: ATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACAT...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR CAA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTATGTCTTCTGCCAACTaGGCTTCGTCAGGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFMSSAN*ASSGSD
Trigger: ATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACAT...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000638207.2
ENST00000638404.1
ENST00000639646.1
CDS-3UTR CAA 90 bp CAGGTTGTTGTTGGCAGCCATGAACTCTTCCAGGTTGGTGAGCTTGCCAATGCCATGTCTTCTGCCAACTaGGCTTCGTCAGGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: QVVVGSHELFQVGELANAMSSAN*ASSGSD
Trigger: ATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACAT...GGCATTGGCAAGCTCACCAACCTGGAAGAGTTCATGGCTGCCAACAACAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp GGACGTGGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: GRGWSRWCHLSTFFASRQICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...CTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCCACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS GCA 90 bp ATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTTGGAGCACCTGGGAATCAAGGGTCA +
Preference number: 5 (lower is better)
Translates to: ICQVILAKVGAFLSH*KVALLVGAPGNQGS
Trigger: TGACCCTTGATTCCCAGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465046.1
ENST00000493600.6
ENST00000638497.1
ENST00000639112.1
CDS CCA 90 bp AAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTaGAGCACCTGGGAATCAAGGGTCAAGGTGAGGCCAGAGGTCATA +
Preference number: 5 (lower is better)
Translates to: KSRSISQSLQSSPSR*STWESRVKVRPEVI
Trigger: TATGACCTCTGGCCTCACCTTGACCCTTGATTCCCAGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465046.1
ENST00000493600.6
ENST00000638497.1
ENST00000639112.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGCGTGGTCAGGTTGTaGTGGCTCACAGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSVVRL*WLTDKC
Trigger: ACACTTGTCTGTGAGCCACAACAACCTGACCACGCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGCTGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGGAGAGATCATCTAGCTaGAAGATGTCATCGGGGACT +
Preference number: 5 (lower is better)
Translates to: GWSRWCHLSTFFASRQWMERSSS*KMSSGT
Trigger: AGTCCCCGATGACATCTTCAAGCTAGATGATCTCTC...CATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ATTTCGGGACAGGTTCAGAGTTTCCACGTGCACCCACTGGTCTATGCACAGGGAGAGAGATCATCTAGCTaGAAGATGTCATCGGGGACT +
Preference number: 5 (lower is better)
Translates to: ISGQVQSFHVHPLVYAQGERSSS*KMSSGT
Trigger: AGTCCCCGATGACATCTTCAAGCTAGATGATCTCTC...TCCCTGTGCATAGACCAGTGGGTGCACGTGGAAACTCTGAACCTGTCCCGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGAGAGATCATCTAGCTaGAAGATGTCATCGGGGACT +
Preference number: 5 (lower is better)
Translates to: ICFIPSGRVRGLHTCTHTERSSS*KMSSGT
Trigger: AGTCCCCGATGACATCTTCAAGCTAGATGATCTCTC...AGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp CACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGGAGAGATCATCTAGCTaGAAGATGTCATCGGGGACT +
Preference number: 5 (lower is better)
Translates to: HQVVLVQDKFPQLWAPAEERSSS*KMSSGT
Trigger: AGTCCCCGATGACATCTTCAAGCTAGATGATCTCTC...CTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATTGATGAAGAGCTGGTaGGGGATGGTGTCGATGCTG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLMKSW*GMVSML
Trigger: CAGCATCGACACCATCCCCAACCAGCTCTTCATCAA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGTAGGTCAGTGAGGTaGATGAAGAGCTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSRSVR*MKSWLG
Trigger: CCCCAACCAGCTCTTCATCAACCTCACTGACCTACT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGACCGTCAAAGTCCAGCTaGTTGGAATTCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: TRWFLFRTSFLSFGHLQRPSKSS*LEFRYS
Trigger: GCTGTACCTGAATTCCAACAAGCTGGACTTTGACGG...TCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TGGAGCAGGTGGTGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCGTCAAAGTCCAGCTaGTTGGAATTCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: WSRWCHLSTFFASRQWMRPSKSS*LEFRYS
Trigger: GCTGTACCTGAATTCCAACAAGCTGGACTTTGACGG...CCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACACCACCTGCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAAGCTCCAGGTTGTTGTaGGCAGCCATGAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSSRLL*AAMNSS
Trigger: GGAAGAGTTCATGGCTGCCAACAACAACCTGGAGCT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTTCCCAATTCTTGAACTaGGCCTTGAACACCTGCGCC +
Preference number: 5 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLSQFLN*ALNTCA
Trigger: GGCGCAGGTGTTCAAGGCCAAGTTCAAGAATTGGGA...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCCCAATTCTTGAACTaGGCCTTGAACACCTGCGCC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSQFLN*ALNTCA
Trigger: GGCGCAGGTGTTCAAGGCCAAGTTCAAGAATTGGGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGAGTTGGATTTCCCAGACCCCTGAGGGCACCTGTCAGGGTCATCCCCATTGGTATGATGAACTTCCTCTaGAAATGGGACAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: RVGFPRPLRAPVRVIPIGMMNFL*KWDRNL
Trigger: CAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCAT...ACCAATGGGGATGACCCTGACAGGTGCCCTCAGGGGTCTGGGAAATCCAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCCCTAGCGGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAATGATGAACTTCCTCTaGAAATGGGACAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: IPSGRVRGLHTCTHTVERMMNFL*KWDRNL
Trigger: CAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCAT...TCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCCGCTAGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp GTCACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGTTCAGCTTGCTCAGCTaGCAAATGGCTGATGGTCTA +
Preference number: 5 (lower is better)
Translates to: VTRWFLFRTSFLSFGHLQFSLLS*QMADGL
Trigger: TAGACCATCAGCCATTTGCAAGCTGAGCAAGCTGAA...CTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577626.1
ENST00000638796.1
CDS GCA 90 bp ATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTaGAAAGTAGCCCTTCTCGTTGGAGCACCTTCGTTGATAACCTGC +
Preference number: 5 (lower is better)
Translates to: ICQVILAKVGAFLSH*KVALLVGAPSLITC
Trigger: GCAGGTTATCAACGAAGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493401.1
ENST00000639898.1
CDS-3UTR CAA 90 bp TTAAAGGGCATCCACATCTGCTTTATCCCTAGCGGAAGAGTGAGGGGGCTTCACGAGAGATCATCTAGCTaGAAGATGTCATCGGGGACT +
Preference number: 5 (lower is better)
Translates to: LKGIHICFIPSGRVRGLHERSSS*KMSSGT
Trigger: AGTCCCCGATGACATCTTCAAGCTAGATGATCTCTC...GTGAAGCCCCCTCACTCTTCCGCTAGGGATAAAGCAGATGTGGATGCCCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578558.5
ENST00000638207.2
ENST00000638404.1
ENST00000640595.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACCGTCAAAGTCCAGCTaGTTGGAATTCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQPSKSS*LEFRYS
Trigger: GCTGTACCTGAATTCCAACAAGCTGGACTTTGACGG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAATGAACTCTTCCAGGTaGGTGAGCTTGCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQMNSSR*VSLPMP
Trigger: AGGCATTGGCAAGCTCACCAACCTGGAAGAGTTCAT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGTCACCAGGTGGTTCTaGTTCAGGACAAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQVTRWF*FRTSFL
Trigger: GAGGAAACTTGTCCTGAACAAGAACCACCTGGTGAC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTTTCTTGAACTTGGCCTaGAACACCTGCGCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVFLNLA*NTCASV
Trigger: CACCGAGGCGCAGGTGTTCAAGGCCAAGTTCAAGAA...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGCTCTCGAACTTCTTTaGCAGGCTGAAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQALELL*QAEGEG
Trigger: ACCTTCACCTTCAGCCTGCAAAAGAAGTTCGAGAGC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAACTCTCAAAGGGAACCTaGAGGATGAAGCAGAACTCG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQLSKGT*RMKQNS
Trigger: CGAGTTCTGCTTCATCCTCAAGGTTCCCTTTGAGAG...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAATGTCTTCTGCCAACTaGGCTTCGTCAGGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQMSSAN*ASSGSD
Trigger: ATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACAT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CAA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTATGTCTTCTGCCAACTaGGCTTCGTCAGGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLMSSAN*ASSGSD
Trigger: ATCAGACCCTGACGAAGCCAAGTTGGCAGAAGACAT...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
ENST00000639646.1
CDS-3UTR CAA 90 bp TACACGATGCCCTGGTTGTCCTCACTCTCAAAGGGAACCTTGAGGATGAAGCAGATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: YTMPWLSSLSKGTLRMKQICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...CTGCTTCATCCTCAAGGTTCCCTTTGAGAGTGAGGACAACCAGGGCATCGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTTCAGGGTCATCCCCATaGGTGCTGCTTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVSGSSP*VLLEAT
Trigger: AGTAGCCTCAAGCAGCACCAATGGGGATGACCCTGA...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS TCA 90 bp AGGGCTAGTGGCAACATCACACCTCTTGGCCATTGTCTAGCAACATaGTGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGGAGCATT +
Preference number: 5 (lower is better)
Translates to: RASGNITPLGHCLAT*CHHLPGHLGKSRSI
Trigger: AATGCTCCGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGGCCAAGAGGTGTGATGTTGCCACTAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465046.1
ENST00000487369.5
ENST00000638497.1
ENST00000640953.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAGAGAGATCATCTAGCTaGAAGATGTCATCGGGGACT +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQERSSS*KMSSGT
Trigger: AGTCCCCGATGACATCTTCAAGCTAGATGATCTCTC...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CCATTGTCTAGCAACATGATGTCATCATCTGCCAGGTCATCTTGGCAAAAGTCGAGTAGGTCAGTGAGGTaGATGAAGAGCTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PLSSNMMSSSARSSWQKSSRSVR*MKSWLG
Trigger: CCCCAACCAGCTCTTCATCAACCTCACTGACCTACT...CGACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp ACCAGGTGGTTCTTGTTCAGGACAAGTTTCCTCAGCTTTGGGCACCTGCAGAGATCAAAGTCCAGCTTGTaGGAATTCAGGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: TRWFLFRTSFLSFGHLQRSKSSL*EFRYSF
Trigger: GAAGCTGTACCTGAATTCCAACAAGCTGGACTTTGA...TCTCTGCAGGTGCCCAAAGCTGAGGAAACTTGTCCTGAACAAGAACCACCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577626.1
ENST00000578101.5
ENST00000638796.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAACATCGTCCCAATTCTaGAACTTGGCCTTGAACACC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQTSSQF*NLALNT
Trigger: GGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp GGAAGAGTGAGGGGGCTTCACACGTGCACTCACACTGTGGAGAGAGTTGGATTTATGATGAACTTCCTCTaGAAATGGGACAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: GRVRGLHTCTHTVERVGFMMNFL*KWDRNL
Trigger: CAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCAT...AAATCCAACTCTCTCCACAGTGTGAGTGCACGTGTGAAGCCCCCTCACTCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000638207.2
ENST00000638404.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAATCTGCCAGGTCATCTaGGCAAAAGTCGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQICQVI*AKVGAF
Trigger: AAATGCTCCGACTTTTGCCAAGATGACCTGGCAGAT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000577398.6
ENST00000578101.5
ENST00000579294.5
ENST00000581858.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
ENST00000639646.1
ENST00000640412.1
CDS TCA 90 bp CCATGGGAGCCTTTGGGGAGCCACAGAACCAACTCTCACCATCTGTaGGAACACAGACAAGTCATTTCATCATTGTGCCTCAATTTCTTC +
Preference number: 5 (lower is better)
Translates to: PWEPLGSHRTNSHHL*EHRQVISSLCLNFF
Trigger: GAAGAAATTGAGGCACAATGATGAAATGACTTGTCTGTGTTCTCACAGATGGTGAGAGTTGGTTCTGTGGCTCCCCAAAGGCTCCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473425.2
ENST00000638982.1
CDS TCA 90 bp GCTGGTCATGGCCTTGACATTCTCAGGGAAGTAGCCGCCCATCTGTaGGAACACAGACAAGTCATTTCATCATTGTGCCTCAATTTCTTC +
Preference number: 5 (lower is better)
Translates to: AGHGLDILREVAAHL*EHRQVISSLCLNFF
Trigger: GAAGAAATTGAGGCACAATGATGAAATGACTTGTCTGTGTTCTCACAGATGGGCGGCTACTTCCCTGAGAATGTCAAGGCCATGACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581349.5
ENST00000639967.1
CDS-3UTR CAA 90 bp TGTCACCTGAGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTTCAAAGTCCAGCTTGTaGGAATTCAGGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: CHLSTFFASRQWMRPLPLSKSSL*EFRYSF
Trigger: GAAGCTGTACCTGAATTCCAACAAGCTGGACTTTGA...AAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACTCAGGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000638207.2
ENST00000638404.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAATCAAAGTCCAGCTTGTaGGAATTCAGGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQSKSSL*EFRYSF
Trigger: GAAGCTGTACCTGAATTCCAACAAGCTGGACTTTGA...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp AGTACATTCTTTGCTAGCAGACAGTGGATGAGGCCCCTTCCTCTTCCTCACCAAATGATGAACTTCCTCTaGAAATGGGACAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: STFFASRQWMRPLPLPHQMMNFL*KWDRNL
Trigger: CAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCAT...TTGGTGAGGAAGAGGAAGGGGCCTCATCCACTGTCTGCTAGCAAAGAATGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000327031.9
ENST00000545457.6
ENST00000578101.5
ENST00000579294.5
ENST00000638207.2
ENST00000638404.1
ENST00000638812.1
ENST00000639036.1
CDS-3UTR CAA 90 bp CTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTGGATGATGAACTTCCTCTaGAAATGGGACAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: LGKSRSISQSLQSSPSRWMMNFL*KWDRNL
Trigger: CAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCAT...CCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS-3UTR CAA 90 bp ATCTTGGCAAAAGTCGGAGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTATGATGAACTTCCTCTaGAAATGGGACAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: ILAKVGAFLSHCKVALLVMMNFL*KWDRNL
Trigger: CAAGTTCCTGTCCCATTTCAAGAGGAAGTTCATCAT...AACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCTCCGACTTTTGCCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578101.5
ENST00000639036.1
CDS CCA 72 bp CCCCAGCCAGGCACCGGGTGCAGAGGGCGCTGCCGTTaGTGCGGATCTGGTAGAGGCTGGGCTGTTGGGCGC +
Preference number: 6 (lower is better)
Translates to: PQPGTGCRGRCR*CGSGRGWAVGR
Trigger: GCGCCCAACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCCGGTGCCTGGCTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580966.1
ENST00000638833.1
CDS GCA 72 bp CAGCCAGGCACCGGGTGCAGAGGGCGCTGCCGTTGGTaGGGATCTGGTAGAGGCTGGGCTGTTGGGCGCCCT +
Preference number: 6 (lower is better)
Translates to: QPGTGCRGRCRW*GSGRGWAVGRP
Trigger: AGGGCGCCCAACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCCGGTGCCTGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580966.1
ENST00000638833.1
CDS GCA 72 bp GCTCGCCACTGCGTCCTCCCCCAGCCAGGCACCGGGTaGAGAGGGCGCTGCCGTTGGTGCGGATCTGGTAGA +
Preference number: 6 (lower is better)
Translates to: ARHCVLPQPGTG*RGRCRWCGSGR
Trigger: TCTACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCCGGTGCCTGGCTGGGGGAGGACGCAGTGGCGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580966.1
ENST00000638833.1
CDS GCA 72 bp GGATTCAGGCCTGGCTCCCTGACGCTTGCTCGCCACTaGGTCCTCCCCCAGCCAGGCACCGGGTGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: GFRPGSLTLARH*VLPQPGTGCRG
Trigger: CCCTCTGCACCCGGTGCCTGGCTGGGGGAGGACGCAGTGGCGAGCAAGCGTCAGGGAGCCAGGCCTGAATCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580966.1
ENST00000638833.1
CDS GCA 72 bp CTCTGGGTGCGCTGGGTGCTCCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGGAGCTGCCTGTTGTGG +
Preference number: 6 (lower is better)
Translates to: LWVRWVLRRCRV*RAVIAGSCLLW
Trigger: CCACAACAGGCAGCTCCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545457.6
ENST00000638404.1
CDS GCA 72 bp GTCCTCCCCCAGCCAGGCACCGGGTGCAGAGGGCGCTaGCGTTGGTGCGGATCTGGTAGAGGCTGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: VLPQPGTGCRGR*RWCGSGRGWAV
Trigger: AACAGCCCAGCCTCTACCAGATCCGCACCAACGGCAGCGCCCTCTGCACCCGGTGCCTGGCTGGGGGAGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580966.1
ENST00000638833.1
CDS GCA 72 bp CTCTGGGTGCGCTGGGTGCTCCGCAGGTGCAGGGTCTaGAGGGCCGTCATCGCTGGGAGCGGAGCTGTGCAT +
Preference number: 6 (lower is better)
Translates to: LWVRWVLRRCRV*RAVIAGSGAVH
Trigger: ATGCACAGCTCCGCTCCCAGCGATGACGGCCCTGCAGACCCTGCACCTGCGGAGCACCCAGCGCACCCAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581401.1
ENST00000639299.1
CDS CAA 90 bp CTCCAGGCGTGGAAGCAGCGGGTAAAGGCGTGCTGCTCATTGCCCTaGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTGGGT +
Preference number: 6 (lower is better)
Translates to: LQAWKQRVKACCSLP*RTRRSRRGRSCSLG
Trigger: ACCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAATGAGCAGCACGCCTTTACCCGCTGCTTCCACGCCTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578558.5
ENST00000640595.1
CDS CCA 72 bp TCCTGGGCCGGAATGGGGAGCACAGGCTCAGCAGGGTaGGTGGGGTGTCCAGAGTCCCTGCCTGCCTCCACA +
Preference number: 6 (lower is better)
Translates to: SWAGMGSTGSAG*VGCPESLPAST
Trigger: TGTGGAGGCAGGCAGGGACTCTGGACACCCCACCCACCCTGCTGAGCCTGTGCTCCCCATTCCGGCCCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582626.1
ENST00000638205.1
CDS CAA 90 bp CGTCATCGCTGGGAGCGGAGCTGTGCATGCAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGGTGCACCAGGCGGCGCATCTGCGGG +
Preference number: 6 (lower is better)
Translates to: RHRWERSCACSRGFP*STSVCRCTRRRICG
Trigger: CCCGCAGATGCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACAGCTCCGCTCCCAGCGATGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581401.1
ENST00000639299.1
CDS TCA 72 bp GGGAGCGGAGCTGTGCATGCAGCAGGGGGTTTCCATTaGGCACGAGCGTCTGCAGGTGCACCAGGCGGCGCA +
Preference number: 6 (lower is better)
Translates to: GSGAVHAAGGFH*ARASAGAPGGA
Trigger: TGCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACAGCTCCGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581401.1
ENST00000639299.1
CDS GCA 72 bp AACAGCACAGGCTTCCCAGCCCCAGGGGCTTTGTACTaGCCCTGTGCCTGGACCACCTCCTGCAGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: NSTGFPAPGALY*PCAWTTSCSLP
Trigger: GGGCAGGCTGCAGGAGGTGGTCCAGGCACAGGGGCAGTACAAAGCCCCTGGGGCTGGGAAGCCTGTGCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496727.1
ENST00000638492.1
CDS CAA 72 bp CGCCTCCGCAGTCGCATCTTGCGAGCCATAGGGTCCTaGGGCCCACTCCCAGCTGCAGCTGCAGCCACGGTA +
Preference number: 6 (lower is better)
Translates to: RLRSRILRAIGS*GPLPAAAAATV
Trigger: TACCGTGGCTGCAGCTGCAGCTGGGAGTGGGCCCAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545457.6
ENST00000578558.5
ENST00000638404.1
ENST00000640595.1
CDS CAA 72 bp TGGGAGCGGAGCTGTGCATGCAGCAGGGGGTTTCCATaGAGCACGAGCGTCTGCAGGTGCACCAGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: WERSCACSRGFP*STSVCRCTRRR
Trigger: GCGCCGCCTGGTGCACCTGCAGACGCTCGTGCTCAATGGAAACCCCCTGCTGCATGCACAGCTCCGCTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581401.1
ENST00000639299.1
CDS CCA 72 bp GGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTTaGACCGCATGTGCTGGATATATACCTGGCAAGGGG +
Preference number: 6 (lower is better)
Translates to: GPGAAGAAAHVP*TACAGYIPGKG
Trigger: CCCCTTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS CAA 72 bp CGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTaGGACCGCATGTGCTGGATATATACCTGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: RTRRSRRGRSCS*DRMCWIYTWQG
Trigger: CCCTTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS CAA 90 bp GAATCCTTGCGCCTCCGCAGTCGCATCTTGCGAGCCATAGGGTCCTaGGGCCCACTCCCAGCTGCAGCTGCAGCCACGGTAGCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: ESLRLRSRILRAIGS*GPLPAAAAATVAGE
Trigger: CTCTCCTGCTACCGTGGCTGCAGCTGCAGCTGGGAGTGGGCCCAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAGGCGCAAGGATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545457.6
ENST00000578558.5
ENST00000638404.1
ENST00000640595.1
CDS CAA 90 bp GCCTGGTCATCCTGGGCTGAATCCTTGCGCCTCCGCAGTCGCATCTaGCGAGCCATAGGGTCCTTGGGCCCACTCCCAGCTGCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: AWSSWAESLRLRSRI*RAIGSLGPLPAAAA
Trigger: TGCAGCTGCAGCTGGGAGTGGGCCCAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGATGACCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545457.6
ENST00000578558.5
ENST00000638404.1
ENST00000640595.1
CDS CAA 90 bp TTGCCCTTGCGGACCAGGCGCAGCCGGCGCGGCCGCTCATGTTCCTaGGACCGCATGTGCTGGATATATACCTGGCAAGGGGACAGCGAG +
Preference number: 6 (lower is better)
Translates to: LPLRTRRSRRGRSCS*DRMCWIYTWQGDSE
Trigger: CTCGCTGTCCCCTTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCTGCGCCTGGTCCGCAAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS TCA 72 bp GCTCCTCTGTGTGTGCCCGCCTGCCCGCCCGCCTCCTaGCCTGCTTGCTGTAGGAGGTGTCAAACATGGTGT +
Preference number: 6 (lower is better)
Translates to: APLCVPACPPAS*PACCRRCQTWC
Trigger: ACACCATGTTTGACACCTCCTACAGCAAGCAGGTCAGGAGGCGGGCGGGCAGGCGGGCACACACAGAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000465046.1
ENST00000487693.5
ENST00000493401.1
ENST00000493600.6
ENST00000638497.1
ENST00000639112.1
ENST00000639898.1
ENST00000640502.1
CDS GCA 72 bp CTGCAGCTTCCCTCCCTCACTCACCCGGCCTCTTCTTaGACACCTCCCTGGACAGGGTGCCCACTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: LQLPSLTHPASS*TPPWTGCPLPF
Trigger: GAAAGGGAGTGGGCACCCTGTCCAGGGAGGTGTGCAAGAAGAGGCCGGGTGAGTGAGGGAGGGAAGCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582626.1
ENST00000638205.1
CDS CCA 72 bp GTCATTGCAGGACAGATCCACGTCTGGGGTGCAGGGTaGGGTGCATCAGCTGGGGCCCATACACCAGGTGCC +
Preference number: 6 (lower is better)
Translates to: VIAGQIHVWGAG*GASAGAHTPGA
Trigger: GGCACCTGGTGTATGGGCCCCAGCTGATGCACCCCACCCTGCACCCCAGACGTGGATCTGTCCTGCAATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461110.2
ENST00000640363.1
CDS CAA 72 bp TCCTGGGCTGAATCCTTGCGCCTCCGCAGTCGCATCTaGCGAGCCATAGGGTCCTTGGGCCCACTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: SWAESLRLRSRI*RAIGSLGPLPA
Trigger: AGCTGGGAGTGGGCCCAAGGACCCTATGGCTCGCAAGATGCGACTGCGGAGGCGCAAGGATTCAGCCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545457.6
ENST00000578558.5
ENST00000638404.1
ENST00000640595.1
CDS CAA 72 bp CCTGCAGCTTCCCTCCCTCACTCACCCGGCCTCTTCTaGCACACCTCCCTGGACAGGGTGCCCACTCCCTTT +
Preference number: 6 (lower is better)
Translates to: PAASLPHSPGLF*HTSLDRVPTPF
Trigger: AAAGGGAGTGGGCACCCTGTCCAGGGAGGTGTGCAAGAAGAGGCCGGGTGAGTGAGGGAGGGAAGCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582626.1
ENST00000638205.1
CDS CAA 90 bp CCAACTACCCCTGCAGCTTCCCTCCCTCACTCACCCGGCCTCTTCTaGCACACCTCCCTGGACAGGGTGCCCACTCCCTTTCTTCCAGCT +
Preference number: 6 (lower is better)
Translates to: PTTPAASLPHSPGLF*HTSLDRVPTPFLPA
Trigger: AGCTGGAAGAAAGGGAGTGGGCACCCTGTCCAGGGAGGTGTGCAAGAAGAGGCCGGGTGAGTGAGGGAGGGAAGCTGCAGGGGTAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582626.1
ENST00000638205.1
CDS GCA 72 bp AGCCGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTaGTGGATATATACCTGGCAAGGGGACAGCGAGCCT +
Preference number: 6 (lower is better)
Translates to: SRRGRSCSLDRM*WIYTWQGDSEP
Trigger: AGGCTCGCTGTCCCCTTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS CCA 72 bp TGGAAGCCAAGGCACCGGCCACATCAGCTTTCATCCTaGTCTTCCGGCCACCCCGGAGACGCCACTCTGAAC +
Preference number: 6 (lower is better)
Translates to: WKPRHRPHQLSS*SSGHPGDATLN
Trigger: GTTCAGAGTGGCGTCTCCGGGGTGGCCGGAAGACCAGGATGAAAGCTGATGTGGCCGGTGCCTTGGCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496727.1
ENST00000638492.1
CDS CCA 72 bp CGGCGCGGCCGCTCATGTTCCTTGGACCGCATGTGCTaGATATATACCTGGCAAGGGGACAGCGAGCCTTGG +
Preference number: 6 (lower is better)
Translates to: RRGRSCSLDRMC*IYTWQGDSEPW
Trigger: CCAAGGCTCGCTGTCCCCTTGCCAGGTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577398.6
ENST00000639646.1
CDS CAA 72 bp AGGGTGTACAGACACTCGGGCACCCGTGTCAGGTCATaGCAGGACAGATCCACGTCTGGGGTGCAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: RVYRHSGTRVRS*QDRSTSGVQGG
Trigger: CCCACCCTGCACCCCAGACGTGGATCTGTCCTGCAATGACCTGACACGGGTGCCCGAGTGTCTGTACACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461110.2
ENST00000640363.1
CDS CAA 90 bp CACCCCTTGGTCCACGGAGTCCTGGCTCACACCCACAACCCCACCTaGAGGATGAAGCAGAACTCGGAGTTGAGGAGGCTGGAGTCGGTG +
Preference number: 6 (lower is better)
Translates to: HPLVHGVLAHTHNPT*RMKQNSELRRLESV
Trigger: CACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCTTCATCCTCAAGGTGGGGTTGTGGGTGTGAGCCAGGACTCCGTGGACCAAGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580966.1
ENST00000638833.1
CDS TCA 72 bp CAGGGAAGTAGCCGCCCTGGGGGAAGGATGTCAAGGTaGAGCACAGAGCCCCTGCTCACCACCTTCTATGGC +
Preference number: 6 (lower is better)
Translates to: QGSSRPGGRMSR*STEPLLTTFYG
Trigger: GCCATAGAAGGTGGTGAGCAGGGGCTCTGTGCTTCACCTTGACATCCTTCCCCCAGGGCGGCTACTTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000473425.2
ENST00000578101.5
ENST00000638982.1
ENST00000639036.1
CDS CAA 72 bp GGAGCCACAGAACCAACTCTCACCATCTTGAAGTCGTaGCCGCTGAGGTCCACGCCACGCACGAACGGCAGC +
Preference number: 6 (lower is better)
Translates to: GATEPTLTILKS*PLRSTPRTNGS
Trigger: GCTGCCGTTCGTGCGTGGCGTGGACCTCAGCGGCAACGACTTCAAGATGGTGAGAGTTGGTTCTGTGGCTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000628188.1
ENST00000638637.1
ENST00000639036.1
CDS TCA 72 bp ACTGAGGGCCTCAGACGCACGGGCAGTGAGGTGAGCTaGTTTCGGGACAGGTTCAGAGTTTCCACGTGCACC +
Preference number: 6 (lower is better)
Translates to: TEGLRRTGSEVS*FRDRFRVSTCT
Trigger: GGTGCACGTGGAAACTCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCCCGTGCGTCTGAGGCCCTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488221.5
ENST00000639925.1
CDS TCA 72 bp CCCCTACTGAGGGCCTCAGACGCACGGGCAGTGAGGTaGGCTGATTTCGGGACAGGTTCAGAGTTTCCACGT +
Preference number: 6 (lower is better)
Translates to: PLLRASDARAVR*ADFGTGSEFPR
Trigger: ACGTGGAAACTCTGAACCTGTCCCGAAATCAGCTCACCTCACTGCCCGTGCGTCTGAGGCCCTCAGTAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488221.5
ENST00000639925.1
CDS TCA 72 bp TGGCCTCCCCGCCAATCCAGTAGTAGATCTCCCAGTTaGGGGAGCCGCTGTCATCCAGAAAGGTCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: WPPRQSSSRSPS*GSRCHPERSGS
Trigger: GCTTCCAGACCTTTCTGGATGACAGCGGCTCCCTCAACTGGGAGATCTACTACTGGATTGGCGGGGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496727.1
ENST00000638492.1
CDS GCA 72 bp CACCTGCCAGGGAGGCCATCAACTAACCATGAGGGGTaGGGCATGATTAGAGTTGGAGGAAGTAGCCCGAGG +
Preference number: 6 (lower is better)
Translates to: HLPGRPSTNHEG*GMIRVGGSSPR
Trigger: CCTCGGGCTACTTCCTCCAACTCTAATCATGCCGCACCCCTCATGGTTAGTTGATGGCCTCCCTGGCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459958.2
ENST00000639123.1
CDS CCA 72 bp AGGAGGCTGGAGTCGGTGTTGATCTGGATGCACCTGTaGAAGGGATGGGGCATCAGCAAGGATTCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: RRLESVLIWMHL*KGWGISKDSGL
Trigger: CAGGCCTGAATCCTTGCTGATGCCCCATCCCTTCCACAGGTGCATCCAGATCAACACCGACTCCAGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474265.5
ENST00000580966.1
ENST00000638833.1
ENST00000640241.1
CDS CCA 72 bp TCCCAGTTGAGGGAGCCGCTGTCATCCAGAAAGGTCTaGAAGCCAAGGCACCGGCCACATCAGCTTTCATCC +
Preference number: 6 (lower is better)
Translates to: SQLREPLSSRKV*KPRHRPHQLSS
Trigger: GGATGAAAGCTGATGTGGCCGGTGCCTTGGCTTCCAGACCTTTCTGGATGACAGCGGCTCCCTCAACTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496727.1
ENST00000638492.1
CDS CAA 90 bp CAGGCACACCTCCAGCTTCCCAGGGAAGAGGCTCTCGAACTTCTTTaGCAGGCTGAAGGTGAAGGTGAGCCAGCCCATATTGGAGGCTTC +
Preference number: 6 (lower is better)
Translates to: QAHLQLPREEALELL*QAEGEGEPAHIGGF
Trigger: GAAGCCTCCAATATGGGCTGGCTCACCTTCACCTTCAGCCTGCAAAAGAAGTTCGAGAGCCTCTTCCCTGGGAAGCTGGAGGTGTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459958.2
ENST00000639123.1
CDS CAA 90 bp GCTCACACCCACAACCCCACCTTGAGGATGAAGCAGAACTCGGAGTaGAGGAGGCTGGAGTCGGTGTTGATCTGGATGCACCTGTGGAAG +
Preference number: 6 (lower is better)
Translates to: AHTHNPTLRMKQNSE*RRLESVLIWMHLWK
Trigger: CTTCCACAGGTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCTTCATCCTCAAGGTGGGGTTGTGGGTGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580966.1
ENST00000638833.1
CDS TCA 72 bp CAGGGAGGCCATCAACTAACCATGAGGGGTGCGGCATaGTTAGAGTTGGAGGAAGTAGCCCGAGGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: QGGHQLTMRGAA*LELEEVARGLR
Trigger: CCTCAAGCCTCGGGCTACTTCCTCCAACTCTAATCATGCCGCACCCCTCATGGTTAGTTGATGGCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459958.2
ENST00000639123.1
CDS TCA 72 bp CCTGGCCTCCCTGAACAAAACTCTGGAGTTGGGGACTaGGCCATCTTAGAGGAAGGTACTGGGCCACATGGC +
Preference number: 6 (lower is better)
Translates to: PGLPEQNSGVGD*AILEEGTGPHG
Trigger: GCCATGTGGCCCAGTACCTTCCTCTAAGATGGCTCAGTCCCCAACTCCAGAGTTTTGTTCAGGGAGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496727.1
ENST00000638492.1
CDS CCA 72 bp AACTCGGAGTTGAGGAGGCTGGAGTCGGTGTTGATCTaGATGCACCTGTGGAAGGGATGGGGCATCAGCAAG +
Preference number: 6 (lower is better)
Translates to: NSELRRLESVLI*MHLWKGWGISK
Trigger: CTTGCTGATGCCCCATCCCTTCCACAGGTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474265.5
ENST00000580966.1
ENST00000638833.1
ENST00000640241.1
CDS CCA 72 bp CCACCTTCTATGGCTCCTCCAGCCCATGGGAGCCTTTaGGGAGCCACAGAACCAACTCTCACCATCTTGAAG +
Preference number: 6 (lower is better)
Translates to: PPSMAPPAHGSL*GATEPTLTILK
Trigger: CTTCAAGATGGTGAGAGTTGGTTCTGTGGCTCCCCAAAGGCTCCCATGGGCTGGAGGAGCCATAGAAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578101.5
ENST00000628188.1
ENST00000638637.1
ENST00000639036.1
CDS CAA 72 bp GCAAGTGACAACTGCTGTGCGCCCAAGTTTCTCCATTaGGACAAACTCCCTCACATGGGGGTTGCGGGGGAG +
Preference number: 6 (lower is better)
Translates to: ASDNCCAPKFLH*DKLPHMGVAGE
Trigger: CTCCCCCGCAACCCCCATGTGAGGGAGTTTGTCCAAATGGAGAAACTTGGGCGCACAGCAGTTGTCACTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000461110.2
ENST00000640363.1
CDS CCA 72 bp CAAGTGACAACTGCTGTGCGCCCAAGTTTCTCCATTTaGACAAACTCCCTCACATGGGGGTTGCGGGGGAGT +
Preference number: 6 (lower is better)
Translates to: QVTTAVRPSFSI*TNSLTWGLRGS
Trigger: ACTCCCCCGCAACCCCCATGTGAGGGAGTTTGTCCAAATGGAGAAACTTGGGCGCACAGCAGTTGTCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000461110.2
ENST00000640363.1
CDS CAA 72 bp CACAACCCCACCTTGAGGATGAAGCAGAACTCGGAGTaGAGGAGGCTGGAGTCGGTGTTGATCTGGATGCAC +
Preference number: 6 (lower is better)
Translates to: HNPTLRMKQNSE*RRLESVLIWMH
Trigger: GTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCTTCATCCTCAAGGTGGGGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580966.1
ENST00000638833.1
CDS TCA 72 bp AGCTCTGCCACCTCTGAGCTGTGTGGCTTAGGCAAGTaGCAACTGCTGTGCGCCCAAGTTTCTCCATTTGGA +
Preference number: 6 (lower is better)
Translates to: SSATSELCGLGK*QLLCAQVSPFG
Trigger: TCCAAATGGAGAAACTTGGGCGCACAGCAGTTGTCACTTGCCTAAGCCACACAGCTCAGAGGTGGCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461110.2
ENST00000640363.1
CDS GCA 72 bp ACATCGTCCCAATTCTTGAACTTGGCCTTGAACACCTaGCAGGGAGGCCATCAACTAACCATGAGGGGTGCG +
Preference number: 6 (lower is better)
Translates to: TSSQFLNLALNT*QGGHQLTMRGA
Trigger: CGCACCCCTCATGGTTAGTTGATGGCCTCCCTGGCAGGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459958.2
ENST00000639123.1
CDS CCA 72 bp CAGTCACTGCAAAGTAGCCCTTCTCGTTGGAGCACCTaGGAATCAAGGGTCAAGGTGAGGCCAGAGGTCATA +
Preference number: 6 (lower is better)
Translates to: QSLQSSPSRWST*ESRVKVRPEVI
Trigger: TATGACCTCTGGCCTCACCTTGACCCTTGATTCCCAGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465046.1
ENST00000493600.6
ENST00000638497.1
ENST00000639112.1
CDS CAA 90 bp TCCTCACTCTCAAAGGGAACCTTGAGGATGAAGCAGAACTCGGAGTaGAGGAGGCTGGAGTCGGTGTTGATCTGGATGCACCTGTGGAAG +
Preference number: 6 (lower is better)
Translates to: SSLSKGTLRMKQNSE*RRLESVLIWMHLWK
Trigger: CTTCCACAGGTGCATCCAGATCAACACCGACTCCAGCCTCCTCAACTCCGAGTTCTGCTTCATCCTCAAGGTTCCCTTTGAGAGTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474265.5
ENST00000640241.1
CDS CCA 72 bp AGCATTTCTCAGTCACTGCAAAGTAGCCCTTCTCGTTaGAGCACCTGGGAATCAAGGGTCAAGGTGAGGCCA +
Preference number: 6 (lower is better)
Translates to: SISQSLQSSPSR*STWESRVKVRP
Trigger: TGGCCTCACCTTGACCCTTGATTCCCAGGTGCTCCAACGAGAAGGGCTACTTTGCAGTGACTGAGAAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465046.1
ENST00000493600.6
ENST00000638497.1
ENST00000639112.1
CDS CAA 72 bp CACTGTAACATAACTCCAGCCTTTTCCCTCTGGGTATaGGTCCGAAGAGCAGGGTTCAACCCCTTCCACCCA +
Preference number: 6 (lower is better)
Translates to: HCNITPAFSLWV*VRRAGFNPFHP
Trigger: TGGGTGGAAGGGGTTGAACCCTGCTCTTCGGACCAATACCCAGAGGGAAAAGGCTGGAGTTATGTTACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461110.2
ENST00000478416.1
ENST00000639718.1
ENST00000640363.1
CDS CAA 72 bp ACCGTCAACACATCGTCCCAATTCTTGAACTTGGCCTaGAACACCTGCCAGGGAGGCCATCAACTAACCATG +
Preference number: 6 (lower is better)
Translates to: TVNTSSQFLNLA*NTCQGGHQLTM
Trigger: CATGGTTAGTTGATGGCCTCCCTGGCAGGTGTTCAAGGCCAAGTTCAAGAATTGGGACGATGTGTTGACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459958.2
ENST00000639123.1
CDS CAA 90 bp CCCTGCACCAGCAGTGTGATCTCAGCCTTCCCTTTCCGCTCATTCTaGTTAATTTTCTCTGCAAAGAGCCTGAGAGCAGGATGCAAAGTC +
Preference number: 6 (lower is better)
Translates to: PCTSSVISAFPFRSF*LIFSAKSLRAGCKV
Trigger: GACTTTGCATCCTGCTCTCAGGCTCTTTGCAGAGAAAATTAACAAGAATGAGCGGAAAGGGAAGGCTGAGATCACACTGCTGGTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577402.1
ENST00000638673.1
CDS TCA 72 bp GGCCTTGACATTCTCAGGGAAGTAGCCGCCCATCTGTaGGAACACAGACAAGTCATTTCATCATTGTGCCTC +
Preference number: 6 (lower is better)
Translates to: GLDILREVAAHL*EHRQVISSLCL
Trigger: GAGGCACAATGATGAAATGACTTGTCTGTGTTCTCACAGATGGGCGGCTACTTCCCTGAGAATGTCAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581349.5
ENST00000639967.1
CDS CAA 72 bp TTGGAATTCAGGTACAGCTTCTTCAGCTTGCTCAGCTaGCAAATGGCTGATGGTCTATGCACAGGGACAGCT +
Preference number: 6 (lower is better)
Translates to: LEFRYSFFSLLS*QMADGLCTGTA
Trigger: AGCTGTCCCTGTGCATAGACCATCAGCCATTTGCAAGCTGAGCAAGCTGAAGAAGCTGTACCTGAATTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577626.1
ENST00000638796.1
CDS TCA 72 bp GGCAACATCACACCTCTTGGCCATTGTCTAGCAACATaGTGTCATCATCTGCCAGGTCATCTTGGCAAAAGT +
Preference number: 6 (lower is better)
Translates to: GNITPLGHCLAT*CHHLPGHLGKS
Trigger: ACTTTTGCCAAGATGACCTGGCAGATGATGACATCATGTTGCTAGACAATGGCCAAGAGGTGTGATGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465046.1
ENST00000487369.5
ENST00000638497.1
ENST00000640953.1