Pregenerated sensors for FKBP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000100442Ensembl transcript IDs: ENST00000216330.7, ENST00000396062.4, ENST00000556231.1, ENST00000557324.5
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAATATTAACCTTATGTTCACCTTTATTAGTGGCTCATTGGTTTTaGAGTACACCTTTTCTAAATTCAGGTCTTGATCTTCCTGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: VILTLCSPLLVAHWF*STPFLNSGLDLPAK Trigger: CTTGGCAGGAAGATCAAGACCTGAATTTAGAAAAGGTGTACTTCAAAACCAATGAGCCACTAATAAAGGTGAACATAAGGTTAATATTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| 3UTR-3UTR CCA 90 bp | ATACCAGCAGTGAACAACATCTCCCTTTTTGGGAAAGTTGGTTTTATCTCCCTTTTTAGTATATTTTGGTaGACCCTCATCCAGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: IPAVNNISLFGKVGFISLFSIFW*TLIQGL Trigger: GAGACCCTGGATGAGGGTCCACCAAAATATACTAAA...AAGGGAGATAAAACCAACTTTCCCAAAAAGGGAGATGTTGTTCACTGCTGGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000557324.5 |
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| 3UTR-3UTR GCA 90 bp | ACCTTTATTAGTGGCTCATTGGTTTTGAAGTACACCTTTTCTAAATTCAGGTCTTCCCCTCAAGCCTTATaGTTTTGCCTTCTCATTATA | + |
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Preference number: 2 (lower is better) Translates to: TFISGSLVLKYTFSKFRSSPQAL*FCLLII Trigger: TATAATGAGAAGGCAAAAGCATAAGGCTTGAGGGGA...AGACCTGAATTTAGAAAAGGTGTACTTCAAAACCAATGAGCCACTAATAAAGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CCA 90 bp | GGAGTTACTCCCTGGTTTGATGAGGTCCTTAGTTCCAATTCCCTAATCAGAACAGGTCCACGCCCGCTGTaGAACGGCCGCCGCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: GVTPWFDEVLSSNSLIRTGPRPL*NGRRHL Trigger: AAGATGGCGGCGGCCGTTCCACAGCGGGCGTGGACC...TGTTCTGATTAGGGAATTGGAACTAAGGACCTCATCAAACCAGGGAGTAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CCA 90 bp | ATACCAGCAGTGAACAACATCTCCCTTTTTGGGAAAGTTGGTTTTATCTCCCTTGGTCCACGCCCGCTGTaGAACGGCCGCCGCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: IPAVNNISLFGKVGFISLGPRPL*NGRRHL Trigger: AAGATGGCGGCGGCCGTTCCACAGCGGGCGTGGACC...AAGGGAGATAAAACCAACTTTCCCAAAAAGGGAGATGTTGTTCACTGCTGGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557324.5 |
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| CDS-3UTR GCA 90 bp | GGAGTTACTCCCTGGTTTGATGAGGTCCTTAGTTCCAATTCCCTAATCAGAACAGCCATCTTCCCCCGCTaGCTCCGCTTTACTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVTPWFDEVLSSNSLIRTAIFPR*LRFTEP Trigger: TGGCTCAGTAAAGCGGAGGCAGCGGGGGAAGATGGC...TGTTCTGATTAGGGAATTGGAACTAAGGACCTCATCAAACCAGGGAGTAACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS-3UTR CCA 90 bp | AGTACACCTTTTCTAAATTCAGGTCTTGATCTTCCTGCCAAGATTTTTCTGCTTGGTCCACGCCCGCTGTaGAACGGCCGCCGCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: STPFLNSGLDLPAKIFLLGPRPL*NGRRHL Trigger: AAGATGGCGGCGGCCGTTCCACAGCGGGCGTGGACC...AAGCAGAAAAATCTTGGCAGGAAGATCAAGACCTGAATTTAGAAAAGGTGTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR TCA 90 bp | GGAGTTACTCCCTGGTTTGATGAGGTCCTTAGTTCCAATTCCCTAATCAGAACAGGGCCTGTCTTTGAGTaGCGTCAAGGCTGTGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: GVTPWFDEVLSSNSLIRTGPVFE*RQGCAM Trigger: CATAGCACAGCCTTGACGTCACTCAAAGACAGGCCC...TGTTCTGATTAGGGAATTGGAACTAAGGACCTCATCAAACCAGGGAGTAACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS-3UTR TCA 90 bp | ACAGCTGTAGGAAAGTATTTTAGACCAGGGATTCATAAGGGATTTATCTCTCAACTGCCTCCGCTTTACTaGGCCAGCCCGCCGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAVGKYFRPGIHKGFISQLPPLY*ASPPQF Trigger: GAACTGCGGCGGGCTGGCTCAGTAAAGCGGAGGCAG...TTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAAATACTTTCCTACAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS-3UTR GCA 90 bp | GGAGTTACTCCCTGGTTTGATGAGGTCCTTAGTTCCAATTCCCTAATCAGAACATACCGCGGTCGTCTCTaGAGTCGACTGAGTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVTPWFDEVLSSNSLIRTYRGRL*SRLSRR Trigger: TCTTCTACTCAGTCGACTGCAGAGACGACCGCGGTA...TGTTCTGATTAGGGAATTGGAACTAAGGACCTCATCAAACCAGGGAGTAACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS-3UTR GCA 90 bp | TTCACCTTTATTAGTGGCTCATTGGTTTTGAAGTACACCTTTTCTAAATTCAGGCGAGGGGCGGGCCTCTaGTCTAGCAGTCGGGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTFISGSLVLKYTFSKFRRGAGL*SSSRDW Trigger: CCAATCCCGACTGCTAGAGCAGAGGCCCGCCCCTCG...CCTGAATTTAGAAAAGGTGTACTTCAAAACCAATGAGCCACTAATAAAGGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS-3UTR CCA 90 bp | GGAGTTACTCCCTGGTTTGATGAGGTCCTTAGTTCCAATTCCCTAATCAGAACATCTAGCAGTCGGGATTaGGGCCTGTCTTTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GVTPWFDEVLSSNSLIRTSSSRD*GLSLSD Trigger: GTCACTCAAAGACAGGCCCCAATCCCGACTGCTAGA...TGTTCTGATTAGGGAATTGGAACTAAGGACCTCATCAAACCAGGGAGTAACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS-3UTR CCA 90 bp | ATACCAGCAGTGAACAACATCTCCCTTTTTGGGAAAGTTGGTTTTATCTCCCTTAAGAAACTGGCGTGGTaGCACGCGCCTGTAGTCCTA | + |
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Preference number: 4 (lower is better) Translates to: IPAVNNISLFGKVGFISLKKLAW*HAPVVL Trigger: TAGGACTACAGGCGCGTGCCACCACGCCAGTTTCTT...AAGGGAGATAAAACCAACTTTCCCAAAAAGGGAGATGTTGTTCACTGCTGGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557324.5 |
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| CDS-3UTR TCA 90 bp | ATACCAGCAGTGAACAACATCTCCCTTTTTGGGAAAGTTGGTTTTATCTCCCTTCACTCCAGCCGAATCTaGACCGTGTTCCTGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: IPAVNNISLFGKVGFISLHSSRI*TVFLQK Trigger: TTTCTGCAGGAACACGGTTCAGATTCGGCTGGAGTG...AAGGGAGATAAAACCAACTTTCCCAAAAAGGGAGATGTTGTTCACTGCTGGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557324.5 |
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| CDS-3UTR CCA 90 bp | GGAGTTACTCCCTGGTTTGATGAGGTCCTTAGTTCCAATTCCCTAATCAGAACACTGGGAGTTACTCCCTaGTTTGATGAGGTCCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVTPWFDEVLSSNSLIRTLGVTP*FDEVLS Trigger: ACTAAGGACCTCATCAAACCAGGGAGTAACTCCCAG...TGTTCTGATTAGGGAATTGGAACTAAGGACCTCATCAAACCAGGGAGTAACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR TCA 90 bp | AGTACACCTTTTCTAAATTCAGGTCTTGATCTTCCTGCCAAGATTTTTCTGCTTTTGTTGAGTCCGGGTTaGAAAACCTACCGCGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: STPFLNSGLDLPAKIFLLLLSPG*KTYRGR Trigger: ACGACCGCGGTAGGTTTTTCAACCCGGACTCAACAA...AAGCAGAAAAATCTTGGCAGGAAGATCAAGACCTGAATTTAGAAAAGGTGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS-3UTR TCA 90 bp | TTCACCTTTATTAGTGGCTCATTGGTTTTGAAGTACACCTTTTCTAAATTCAGGATTGGGGCCTGTCTTTaGGTGACGTCAAGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTFISGSLVLKYTFSKFRIGACL*VTSRLC Trigger: GCACAGCCTTGACGTCACTCAAAGACAGGCCCCAAT...CCTGAATTTAGAAAAGGTGTACTTCAAAACCAATGAGCCACTAATAAAGGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS-3UTR CCA 90 bp | TTTAGACCAGGGATTCATAAGGGATTTATCTCTCAAAAGCTGGGACCAAGTAAATCCGTAAGCCCATTCTaGTTCAATCTCCAGTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRPGIHKGFISQKLGPSKSVSPF*FNLQSS Trigger: GCTCGACTGGAGATTGAACCAGAATGGGCTTACGGA...TTTACTTGGTCCCAGCTTTTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CCA 90 bp | ACAGCTGTAGGAAAGTATTTTAGACCAGGGATTCATAAGGGATTTATCTCTCAATCCGTAAGCCCATTCTaGTTCAATCTCCAGTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAVGKYFRPGIHKGFISQSVSPF*FNLQSS Trigger: GCTCGACTGGAGATTGAACCAGAATGGGCTTACGGA...TTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAAATACTTTCCTACAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CCA 90 bp | GCCTTCTCATTATACAGGCAATCTGTCCAGATAATTTTACTGGGAGTTACTCCCGAGTTTTGCATTTGGTaGAATTTTGGCATCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: AFSLYRQSVQIILLGVTPEFCIW*NFGIRL Trigger: CAGCCTGATGCCAAAATTCCACCAAATGCAAAACTC...GGGAGTAACTCCCAGTAAAATTATCTGGACAGATTGCCTGTATAATGAGAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR TCA 90 bp | GCCTTCTCATTATACAGGCAATCTGTCCAGATAATTTTACTGGGAGTTACTCCCAGAGATCTTCGATTCTaGATTAGACACCTTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AFSLYRQSVQIILLGVTPRDLRF*IRHLVK Trigger: CTTCACAAGGTGTCTAATTCAGAATCGAAGATCTCT...GGGAGTAACTCCCAGTAAAATTATCTGGACAGATTGCCTGTATAATGAGAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS-3UTR CCA 90 bp | ACAGCTGTAGGAAAGTATTTTAGACCAGGGATTCATAAGGGATTTATCTCTCAACTGGGAGTTACTCCCTaGTTTGATGAGGTCCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: TAVGKYFRPGIHKGFISQLGVTP*FDEVLS Trigger: ACTAAGGACCTCATCAAACCAGGGAGTAACTCCCAG...TTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAAATACTTTCCTACAGCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR GCA 90 bp | TTCACCTTTATTAGTGGCTCATTGGTTTTGAAGTACACCTTTTCTAAATTCAGGGTGACGTCAAGGCTGTaGTATGAGGGCTTCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: FTFISGSLVLKYTFSKFRVTSRL*YEGFFV Trigger: AACAAAGAAGCCCTCATAGCACAGCCTTGACGTCAC...CCTGAATTTAGAAAAGGTGTACTTCAAAACCAATGAGCCACTAATAAAGGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS-3UTR CCA 90 bp | ACAGCTGTAGGAAAGTATTTTAGACCAGGGATTCATAAGGGATTTATCTCTCAATTTAGTATATTTTGGTaGACCCTCATCCAGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TAVGKYFRPGIHKGFISQFSIFW*TLIQGL Trigger: GAGACCCTGGATGAGGGTCCACCAAAATATACTAAA...TTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAAATACTTTCCTACAGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CCA 90 bp | ACAGCTGTAGGAAAGTATTTTAGACCAGGGATTCATAAGGGATTTATCTCTCAACATTTGGTGGAATTTTaGCATCAGGCTGTCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TAVGKYFRPGIHKGFISQHLVEF*HQAVLS Trigger: AGAAAGGACAGCCTGATGCCAAAATTCCACCAAATG...TTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAAATACTTTCCTACAGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CCA 90 bp | AGTACACCTTTTCTAAATTCAGGTCTTGATCTTCCTGCCAAGATTTTTCTGCTTGAGTTTTGCATTTGGTaGAATTTTGGCATCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: STPFLNSGLDLPAKIFLLEFCIW*NFGIRL Trigger: CAGCCTGATGCCAAAATTCCACCAAATGCAAAACTC...AAGCAGAAAAATCTTGGCAGGAAGATCAAGACCTGAATTTAGAAAAGGTGTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR TCA 90 bp | TTTAGACCAGGGATTCATAAGGGATTTATCTCTCAAAAGCTGGGACCAAGTAAAATTCCACTTCAAAAGTaGGTTTTGCATTTGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: FRPGIHKGFISQKLGPSKIPLQK*VLHLVE Trigger: TTCCACCAAATGCAAAACTCACTTTTGAAGTGGAAT...TTTACTTGGTCCCAGCTTTTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR TCA 90 bp | TTTAGACCAGGGATTCATAAGGGATTTATCTCTCAAAAGCTGGGACCAAGTAAAGTGGCTCATTGGTTTTaGAGTACACCTTTTCTAAAT | + |
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Preference number: 4 (lower is better) Translates to: FRPGIHKGFISQKLGPSKVAHWF*STPFLN Trigger: ATTTAGAAAAGGTGTACTTCAAAACCAATGAGCCAC...TTTACTTGGTCCCAGCTTTTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR GCA 90 bp | ACAGCTGTAGGAAAGTATTTTAGACCAGGGATTCATAAGGGATTTATCTCTCAATCCCCTCAAGCCTTATaGTTTTGCCTTCTCATTATA | + |
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Preference number: 4 (lower is better) Translates to: TAVGKYFRPGIHKGFISQSPQAL*FCLLII Trigger: TATAATGAGAAGGCAAAAGCATAAGGCTTGAGGGGA...TTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAAATACTTTCCTACAGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR TCA 90 bp | ACAGCTGTAGGAAAGTATTTTAGACCAGGGATTCATAAGGGATTTATCTCTCAAATTCCACTTCAAAAGTaGGTTTTGCATTTGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: TAVGKYFRPGIHKGFISQIPLQK*VLHLVE Trigger: TTCCACCAAATGCAAAACTCACTTTTGAAGTGGAAT...TTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAAATACTTTCCTACAGCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR TCA 90 bp | ACCTTTATTAGTGGCTCATTGGTTTTGAAGTACACCTTTTCTAAATTCAGGTCTGTGGCTCATTGGTTTTaGAGTACACCTTTTCTAAAT | + |
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Preference number: 4 (lower is better) Translates to: TFISGSLVLKYTFSKFRSVAHWF*STPFLN Trigger: ATTTAGAAAAGGTGTACTTCAAAACCAATGAGCCAC...AGACCTGAATTTAGAAAAGGTGTACTTCAAAACCAATGAGCCACTAATAAAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS TCA 90 bp | GAGGGGCGGGCCTCTGCTCTAGCAGTCGGGATTGGGGCCTGTCTTTaGGTGACGTCAAGGCTGTGCTATGAGGGCTTCTTTGTTGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: EGRASALAVGIGACL*VTSRLCYEGFFVES Trigger: GGACTCAACAAAGAAGCCCTCATAGCACAGCCTTGACGTCACTCAAAGACAGGCCCCAATCCCGACTGCTAGAGCAGAGGCCCGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS TCA 90 bp | CTTGAGTCAGCTGCTCACTGCAGGAGGATACTTGGGTGCAGCCCTTaGGAGCCTCCAGCCAGGTTGGACATAGCTATCCTGAGGCATTTG | + |
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Preference number: 5 (lower is better) Translates to: LESAAHCRRILGCSP*EPPARLDIAILRHL Trigger: CAAATGCCTCAGGATAGCTATGTCCAACCTGGCTGGAGGCTCTCAAGGGCTGCACCCAAGTATCCTCCTGCAGTGAGCAGCTGACTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556231.1 |
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| CDS-3UTR CAA 90 bp | ATACCAGCAGTGAACAACATCTCCCTTTTTGGGAAAGTTGGTTTTATCTCCCTTTTGATAATGTCCTTCTaGGGCAGCTGCTCACTGCGC | + |
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Preference number: 5 (lower is better) Translates to: IPAVNNISLFGKVGFISLLIMSF*GSCSLR Trigger: GCGCAGTGAGCAGCTGCCCAAGAAGGACATTATCAA...AAGGGAGATAAAACCAACTTTCCCAAAAAGGGAGATGTTGTTCACTGCTGGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000557324.5 |
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| CDS-3UTR CAA 90 bp | TTTAGACCAGGGATTCATAAGGGATTTATCTCTCAAAAGCTGGGACCAAGTAAATTTGTTGAGTCCGGGTaGAAAAACCTACCGCGGTCG | + |
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Preference number: 5 (lower is better) Translates to: FRPGIHKGFISQKLGPSKFVESG*KNLPRS Trigger: CGACCGCGGTAGGTTTTTCAACCCGGACTCAACAAA...TTTACTTGGTCCCAGCTTTTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS-3UTR CAA 90 bp | GCCTTCTCATTATACAGGCAATCTGTCCAGATAATTTTACTGGGAGTTACTCCCGAGTTACTCCCTGGTTaGATGAGGTCCTTAGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: AFSLYRQSVQIILLGVTPELLPG*MRSLVP Trigger: TGGAACTAAGGACCTCATCAAACCAGGGAGTAACTC...GGGAGTAACTCCCAGTAAAATTATCTGGACAGATTGCCTGTATAATGAGAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CAA 90 bp | TTCACCTTTATTAGTGGCTCATTGGTTTTGAAGTACACCTTTTCTAAATTCAGGGATTGGGGCCTGTCTTaGAGTGACGTCAAGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: FTFISGSLVLKYTFSKFRDWGLS*SDVKAV Trigger: CACAGCCTTGACGTCACTCAAAGACAGGCCCCAATC...CCTGAATTTAGAAAAGGTGTACTTCAAAACCAATGAGCCACTAATAAAGGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS-3UTR CAA 90 bp | ACAGCTGTAGGAAAGTATTTTAGACCAGGGATTCATAAGGGATTTATCTCTCAATTGATAATGTCCTTCTaGGGCAGCTGCTCACTGCGC | + |
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Preference number: 5 (lower is better) Translates to: TAVGKYFRPGIHKGFISQLIMSF*GSCSLR Trigger: GCGCAGTGAGCAGCTGCCCAAGAAGGACATTATCAA...TTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAAATACTTTCCTACAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CAA 90 bp | TTCACCTTTATTAGTGGCTCATTGGTTTTGAAGTACACCTTTTCTAAATTCAGGTTGATAATGTCCTTCTaGGGCAGCTGCTCACTGCGC | + |
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Preference number: 5 (lower is better) Translates to: FTFISGSLVLKYTFSKFRLIMSF*GSCSLR Trigger: GCGCAGTGAGCAGCTGCCCAAGAAGGACATTATCAA...CCTGAATTTAGAAAAGGTGTACTTCAAAACCAATGAGCCACTAATAAAGGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CAA 90 bp | TTTAGACCAGGGATTCATAAGGGATTTATCTCTCAAAAGCTGGGACCAAGTAAAGCATTTGGTGGAATTTaGGCATCAGGCTGTCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: FRPGIHKGFISQKLGPSKAFGGI*ASGCPF Trigger: GAAAGGACAGCCTGATGCCAAAATTCCACCAAATGC...TTTACTTGGTCCCAGCTTTTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CAA 90 bp | ACAGCTGTAGGAAAGTATTTTAGACCAGGGATTCATAAGGGATTTATCTCTCAAGCATTTGGTGGAATTTaGGCATCAGGCTGTCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: TAVGKYFRPGIHKGFISQAFGGI*ASGCPF Trigger: GAAAGGACAGCCTGATGCCAAAATTCCACCAAATGC...TTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAAATACTTTCCTACAGCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CAA 90 bp | ACAGCTGTAGGAAAGTATTTTAGACCAGGGATTCATAAGGGATTTATCTCTCAAGAGTTACTCCCTGGTTaGATGAGGTCCTTAGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: TAVGKYFRPGIHKGFISQELLPG*MRSLVP Trigger: TGGAACTAAGGACCTCATCAAACCAGGGAGTAACTC...TTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAAATACTTTCCTACAGCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CAA 90 bp | GCCTTCTCATTATACAGGCAATCTGTCCAGATAATTTTACTGGGAGTTACTCCCTCTGCTTTTAGCATTTaGTTTCCCCTCAAGCCTTAT | + |
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Preference number: 5 (lower is better) Translates to: AFSLYRQSVQIILLGVTPSAFSI*FPLKPY Trigger: ATAAGGCTTGAGGGGAAACAAAATGCTAAAAGCAGA...GGGAGTAACTCCCAGTAAAATTATCTGGACAGATTGCCTGTATAATGAGAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CAA 90 bp | GGAGTTACTCCCTGGTTTGATGAGGTCCTTAGTTCCAATTCCCTAATCAGAACAAGTGGCTCATTGGTTTaGAAGTACACCTTTTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: GVTPWFDEVLSSNSLIRTSGSLV*KYTFSK Trigger: TTTAGAAAAGGTGTACTTCAAAACCAATGAGCCACT...TGTTCTGATTAGGGAATTGGAACTAAGGACCTCATCAAACCAGGGAGTAACTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CAA 90 bp | ACAGCTGTAGGAAAGTATTTTAGACCAGGGATTCATAAGGGATTTATCTCTCAACATCCTCTGATAACTTaGCCTACTCCGACCTTAAAA | + |
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Preference number: 5 (lower is better) Translates to: TAVGKYFRPGIHKGFISQHPLIT*PTPTLK Trigger: TTTTAAGGTCGGAGTAGGCAAAGTTATCAGAGGATG...TTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAAATACTTTCCTACAGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS-3UTR CAA 90 bp | TTTAGACCAGGGATTCATAAGGGATTTATCTCTCAAAAGCTGGGACCAAGTAAATCTGCTTTTAGCATTTaGTTTCCCCTCAAGCCTTAT | + |
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Preference number: 5 (lower is better) Translates to: FRPGIHKGFISQKLGPSKSAFSI*FPLKPY Trigger: ATAAGGCTTGAGGGGAAACAAAATGCTAAAAGCAGA...TTTACTTGGTCCCAGCTTTTGAGAGATAAATCCCTTATGAATCCCTGGTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000216330.7 ENST00000396062.4 |
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| CDS CCA 72 bp | GGTCGAGGGGCGGGCCTCTGCTCTAGCAGTCGGGATTaGGGCCTGTCTTTGAGTGACGTCAAGGCTGTGCTA | + |
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Preference number: 6 (lower is better) Translates to: GRGAGLCSSSRD*GLSLSDVKAVL Trigger: TAGCACAGCCTTGACGTCACTCAAAGACAGGCCCCAATCCCGACTGCTAGAGCAGAGGCCCGCCCCTCGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS TCA 72 bp | GGCTGTGCTATGAGGGCTTCTTTGTTGAGTCCGGGTTaGAAAACCTACCGCGGTCGTCTCTGCAGTCGACTG | + |
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Preference number: 6 (lower is better) Translates to: GCAMRASLLSPG*KTYRGRLCSRL Trigger: CAGTCGACTGCAGAGACGACCGCGGTAGGTTTTTCAACCCGGACTCAACAAAGAAGCCCTCATAGCACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS TCA 72 bp | GCCTCTGCTCTAGCAGTCGGGATTGGGGCCTGTCTTTaGGTGACGTCAAGGCTGTGCTATGAGGGCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ASALAVGIGACL*VTSRLCYEGFF Trigger: AAAGAAGCCCTCATAGCACAGCCTTGACGTCACTCAAAGACAGGCCCCAATCCCGACTGCTAGAGCAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS CAA 72 bp | AGGCTGTGCTATGAGGGCTTCTTTGTTGAGTCCGGGTaGAAAAACCTACCGCGGTCGTCTCTGCAGTCGACT | + |
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Preference number: 6 (lower is better) Translates to: RLCYEGFFVESG*KNLPRSSLQST Trigger: AGTCGACTGCAGAGACGACCGCGGTAGGTTTTTCAACCCGGACTCAACAAAGAAGCCCTCATAGCACAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216330.7 |
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| CDS CAA 72 bp | AAAATAACATTTATACAGCAAGCACACTGTGGTGACTaGAGTCAGCTGCTCACTGCAGGAGGATACTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: KITFIQQAHCGD*SQLLTAGGYLG Trigger: ACCCAAGTATCCTCCTGCAGTGAGCAGCTGACTCAAGTCACCACAGTGTGCTTGCTGTATAAATGTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556231.1 |
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