RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FKBP15 (Homo sapiens)

Ensembl gene IDs: ENSG00000119321

Ensembl transcript IDs: ENST00000238256.8, ENST00000414250.2, ENST00000446284.6, ENST00000462889.1, ENST00000489645.1, ENST00000493847.1

Found 1143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGCTCCTTCCACCAGAAGGCACTGCCTGCAGGAAGAAGATGATCTaGTGGCCGTGGGTGTCTGGGAAGCTCTTCGTGGCCTCAATGCCC +
Preference number: 1 (lower is better)
Translates to: ELLPPEGTACRKKMI*WPWVSGKLFVASMP
Trigger: GGGCATTGAGGCCACGAAGAGCTTCCCAGACACCCACGGCCATCAGATCATCTTCTTCCTGCAGGCAGTGCCTTCTGGTGGAAGGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp CAAATGAGGTGGCCACCCACCCTCCCCCAAATCTCACCAGTTCCATaGGTCACTAGGCTCCCATATCCAGGAGGGGATCTGCAGCTGTCC +
Preference number: 1 (lower is better)
Translates to: QMRWPPTLPQISPVP*VTRLPYPGGDLQLS
Trigger: GGACAGCTGCAGATCCCCTCCTGGATATGGGAGCCTAGTGACCCATGGAACTGGTGAGATTTGGGGGAGGGTGGGTGGCCACCTCATTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 90 bp TGGAGTGGATTCCATGAACAGGTGGAGGTGCTGGAAGGGAAACAGTaGTGGCCTGGCCAGGTCTCCACAACTCTGCCTCCTTTGACAGGC +
Preference number: 1 (lower is better)
Translates to: WSGFHEQVEVLEGKQ*WPGQVSTTLPPLTG
Trigger: GCCTGTCAAAGGAGGCAGAGTTGTGGAGACCTGGCCAGGCCAGCACTGTTTCCCTTCCAGCACCTCCACCTGTTCATGGAATCCACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp AGACTGAGCTCCTTCCACCAGAAGGCACTGCCTGCAGGAAGAAGATaGTCTGATGGCCGTGGGTGTCTGGGAAGCTCTTCGTGGCCTCAA +
Preference number: 1 (lower is better)
Translates to: RLSSFHQKALPAGRR*SDGRGCLGSSSWPQ
Trigger: TTGAGGCCACGAAGAGCTTCCCAGACACCCACGGCCATCAGATCATCTTCTTCCTGCAGGCAGTGCCTTCTGGTGGAAGGAGCTCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 90 bp AACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGACTCTaGAGGCTCAGATTCATTCCCTGTTGGCAGAACCCACCACAGGTA +
Preference number: 1 (lower is better)
Translates to: NLHQPADHRRDRRGL*RLRFIPCWQNPPQV
Trigger: TACCTGTGGTGGGTTCTGCCAACAGGGAATGAATCTGAGCCTGCAGAGTCCCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 90 bp TGCAGGATAGAGGTGGATGGAGTGGATTCCATGAACAGGTGGAGGTaGTGGAAGGGAAACAGTGCTGGCCTGGCCAGGTCTCCACAACTC +
Preference number: 1 (lower is better)
Translates to: CRIEVDGVDSMNRWR*WKGNSAGLARSPQL
Trigger: GAGTTGTGGAGACCTGGCCAGGCCAGCACTGTTTCCCTTCCAGCACCTCCACCTGTTCATGGAATCCACTCCATCCACCTCTATCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp TCATTCCCTGTTGGCAGAACCCACCACAGGTACAGGCAGTGGGTATaGGAAAGGGGCAGAAGCCTCACATTCACCCTGAGAGACAGGCTG +
Preference number: 1 (lower is better)
Translates to: SFPVGRTHHRYRQWV*ERGRSLTFTLRDRL
Trigger: CAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCTGCCCCTTTCCCATACCCACTGCCTGTACCTGTGGTGGGTTCTGCCAACAGGGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp AGCTTAGCTGGTGAGGAACGTGCAGGCACTGAGGCTGGAGGGACATaGAGCCCCCTCTTCCAGACACTATACTTCCAACTGCCCTTTCTT +
Preference number: 1 (lower is better)
Translates to: SLAGEERAGTEAGGT*SPLFQTLYFQLPFL
Trigger: AAGAAAGGGCAGTTGGAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGCACGTTCCTCACCAGCTAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp TTCCAACTTGCTGCTGAAATCCCAGTGTTCTTGAAGACAGGGTTATaGTCCTCTTCACCAGGTCTGGCGGGGGTGGGGCTCAGAAGGTGG +
Preference number: 1 (lower is better)
Translates to: FQLAAEIPVFLKTGL*SSSPGLAGVGLRRW
Trigger: CCACCTTCTGAGCCCCACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGGATTTCAGCAGCAAGTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp GAGCAGCTGTTCCCAGTGACAGTATGCCTTATCCACCAAGTGTGTTaGGGCAGAAGAAAGGGTCTGCTACCCCTGGCAAACAGGCTGCTG +
Preference number: 1 (lower is better)
Translates to: EQLFPVTVCLIHQVC*GRRKGLLPLANRLL
Trigger: CAGCAGCCTGTTTGCCAGGGGTAGCAGACCCTTTCTTCTGCCTCAACACACTTGGTGGATAAGGCATACTGTCACTGGGAACAGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR GCA 90 bp TCTCACTGCCTCCCAGGTCCGCACACGGGAGACATATCCAAAGCCTaGAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTA +
Preference number: 1 (lower is better)
Translates to: SHCLPGPHTGDISKA*KDDARPDEVEFWVL
Trigger: TAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGGATATGTCTCCCGTGTGCGGACCTGGGAGGCAGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 90 bp GCCTGTCTGAGGACAGAGTCCATCCATCTGCTACAAAGACAACTCTaGTCAGGGAAACCCAGCCCTGAAATGCTGCACCCAGGTAGACAC +
Preference number: 1 (lower is better)
Translates to: ACLRTESIHLLQRQL*SGKPSPEMLHPGRH
Trigger: GTGTCTACCTGGGTGCAGCATTTCAGGGCTGGGTTTCCCTGAGCAGAGTTGTCTTTGTAGCAGATGGATGGACTCTGTCCTCAGACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 90 bp TTCTTGGTGATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTaGTTTGTGCCTTATCTACAGGAGCATCGCCCATTGGACTTCCTG +
Preference number: 1 (lower is better)
Translates to: FLVMQGMEPGHPQLS*FVPYLQEHRPLDFL
Trigger: CAGGAAGTCCAATGGGCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATCACCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp AGGCACTGCCTGCAGGAAGAAGATGATCTGATGGCCGTGGGTGTCTaGGAAGCTCTTCGTGGCCTCAATGCCCTCCTTTATCCTCATCTT +
Preference number: 1 (lower is better)
Translates to: RHCLQEEDDLMAVGV*EALRGLNALLYPHL
Trigger: AAGATGAGGATAAAGGAGGGCATTGAGGCCACGAAGAGCTTCCCAGACACCCACGGCCATCAGATCATCTTCTTCCTGCAGGCAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp TTCAAGCCAGGGAGAAGGGTTCTTGGTGATGCAGGGCATGGAACCTaGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCA +
Preference number: 1 (lower is better)
Translates to: FKPGRRVLGDAGHGT*TPSALLLCALSTGA
Trigger: TGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATCACCAAGAACCCTTCTCCCTGGCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp TCAGATTCATTCCCTGTTGGCAGAACCCACCACAGGTACAGGCAGTaGGTATGGGAAAGGGGCAGAAGCCTCACATTCACCCTGAGAGAC +
Preference number: 1 (lower is better)
Translates to: SDSFPVGRTHHRYRQ*VWERGRSLTFTLRD
Trigger: GTCTCTCAGGGTGAATGTGAGGCTTCTGCCCCTTTCCCATACCCACTGCCTGTACCTGTGGTGGGTTCTGCCAACAGGGAATGAATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp AACAAGAAGTCACGACAGATTTGTGCAGCCTGCTGGGGGAGTGGGTaGGGTAATGGTACGTGGCTTCTTCACCCTCAGCCCCTGGATTTT +
Preference number: 1 (lower is better)
Translates to: NKKSRQICAACWGSG*GNGTWLLHPQPLDF
Trigger: AAAATCCAGGGGCTGAGGGTGAAGAAGCCACGTACCATTACCCCACCCACTCCCCCAGCAGGCTGCACAAATCTGTCGTGACTTCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp CCTACCAGTCCTTCTTCCAACTTGCTGCTGAAATCCCAGTGTTCTTaGAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTGG +
Preference number: 1 (lower is better)
Translates to: PTSPSSNLLLKSQCS*RQGYDPLHQVWRGW
Trigger: CCACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGGATTTCAGCAGCAAGTTGGAAGAAGGACTGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp CATGGCCCTTTCGGTGTTGGTGCTCCTGCTTCTGGCTGTACTGTATaGAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACT +
Preference number: 1 (lower is better)
Translates to: HGPFGVGAPASGCTV*RHQGWQSQAAQPGT
Trigger: AGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAGTACAGCCAGAAGCAGGAGCACCAACACCGAAAGGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 90 bp TCACCCTGTGGTTCGCCTAGACCCAGGGTTGGCTGTGCAAAATCATaGTTAGGGAAGGGTTGCAGAGAAACCTTTGCACCAGTTTCCTGG +
Preference number: 1 (lower is better)
Translates to: SPCGSPRPRVGCAKS*LGKGCRETFAPVSW
Trigger: CCAGGAAACTGGTGCAAAGGTTTCTCTGCAACCCTTCCCTAAGCATGATTTTGCACAGCCAACCCTGGGTCTAGGCGAACCACAGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp ACCAGGAATTTCCAAAGATTTCAAGCCAGGGAGAAGGGTTCTTGGTaGTGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTG +
Preference number: 1 (lower is better)
Translates to: TRNFQRFQAREKGSW*CRAWNLDTLSSPAL
Trigger: CAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATCACCAAGAACCCTTCTCCCTGGCTTGAAATCTTTGGAAATTCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 90 bp AAGACAGTGAAGAAGTTCGGAACTCAGCAAGGGTGGGGAAGAAGGTaGAGGATAGAGGTGGATGGAGTGGATTCCATGAACAGGTGGAGG +
Preference number: 1 (lower is better)
Translates to: KTVKKFGTQQGWGRR*RIEVDGVDSMNRWR
Trigger: CCTCCACCTGTTCATGGAATCCACTCCATCCACCTCTATCCTGCACCTTCTTCCCCACCCTTGCTGAGTTCCGAACTTCTTCACTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp CTTCATCATGCTGGCCGTAATGTCCTACAACACCTGGATTTTCCTTaGTGTGGTCTTGGGCTCTGCTGTGGGCTACTACCTAGCTTACCC +
Preference number: 1 (lower is better)
Translates to: LHHAGRNVLQHLDFP*CGLGLCCGLLPSLP
Trigger: GGGTAAGCTAGGTAGTAGCCCACAGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGCCAGCATGATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp GTCATCGGCTACTTCATCATGCTGGCCGTAATGTCCTACAACACCTaGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTGTGGGCTACTAC +
Preference number: 1 (lower is better)
Translates to: VIGYFIMLAVMSYNT*IFLGVVLGSAVGYY
Trigger: GTAGTAGCCCACAGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGCCAGCATGATGAAGTAGCCGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 90 bp GACTATGTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTaGAGGGAACTGGAAAGCTGCCTGGTGTCTCAAGAAGCCTGTTTC +
Preference number: 1 (lower is better)
Translates to: DYVTPLGLIRAFPHV*RELESCLVSQEACF
Trigger: GAAACAGGCTTCTTGAGACACCAGGCAGCTTTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGACATAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp ACTGGCTTGGAGGGGAACCTACCAGTCCTTCTTCCAACTTGCTGCTaGAATCCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACC +
Preference number: 1 (lower is better)
Translates to: TGLEGNLPVLLPTCC*NPSVLEDRVMILFT
Trigger: GGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGGATTTCAGCAGCAAGTTGGAAGAAGGACTGGTAGGTTCCCCTCCAAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp TCTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTaGGGGACAGAGACCAAGCTAGATCCTTTTTCTCACCTTTCTGCC +
Preference number: 1 (lower is better)
Translates to: STGASPIGLPDLFCL*GTETKLDPFSHLSA
Trigger: GGCAGAAAGGTGAGAAAAAGGATCTAGCTTGGTCTCTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp CCTGCTTTGTGCCTTATCTACAGGAGCATCGCCCATTGGACTTCCTaGCCTCTTCTGTCTTTGAGGGACAGAGACCAAGCTAGATCCTTT +
Preference number: 1 (lower is better)
Translates to: PALCLIYRSIAHWTS*PLLSLRDRDQARSF
Trigger: AAAGGATCTAGCTTGGTCTCTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAGATAAGGCACAAAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp CCTATCCACCATCATTCCCACACCTCCATTAAGCATCACAAGGAGTaGGCAGCTGTTCCCAGTGACAGTATGCCTTATCCACCAAGTGTG +
Preference number: 1 (lower is better)
Translates to: PIHHHSHTSIKHHKE*AAVPSDSMPYPPSV
Trigger: CACACTTGGTGGATAAGGCATACTGTCACTGGGAACAGCTGCTCACTCCTTGTGATGCTTAATGGAGGTGTGGGAATGATGGTGGATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR CCA 90 bp AAGAGATTAAAAAGTCTGGCAGAGGACAGGACTCTTACAGGTGACTaGCTTGGAGGGGAACCTACCAGTCCTTCTTCCAACTTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: KRLKSLAEDRTLTGD*LGGEPTSPSSNLLL
Trigger: CAGCAGCAAGTTGGAAGAAGGACTGGTAGGTTCCCCTCCAAGCCAGTCACCTGTAAGAGTCCTGTCCTCTGCCAGACTTTTTAATCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp GGAAGCTGCTCTCAAAGTGAAGAATCCCTCAGGTGCCATGAACAATaGAAAGAAGGGACCCTCTCACCTTCTTTGCATGGCTTCCTAGAC +
Preference number: 1 (lower is better)
Translates to: GSCSQSEESLRCHEQ*KEGTLSPSLHGFLD
Trigger: GTCTAGGAAGCCATGCAAAGAAGGTGAGAGGGTCCCTTCTTTCCATTGTTCATGGCACCTGAGGGATTCTTCACTTTGAGAGCAGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp AAAAGTCTGGTGAAGACAGTGAAGAAGTTCGGAACTCAGCAAGGGTaGGGAAGAAGGTGCAGGATAGAGGTGGATGGAGTGGATTCCATG +
Preference number: 1 (lower is better)
Translates to: KSLVKTVKKFGTQQG*GRRCRIEVDGVDSM
Trigger: CATGGAATCCACTCCATCCACCTCTATCCTGCACCTTCTTCCCCACCCTTGCTGAGTTCCGAACTTCTTCACTGTCTTCACCAGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 90 bp CAGCACCGCCTTTTGTTAAGCAACAAAGAAATAATTAGTTCTCACTaGCTCCCAGGTCCGCACACGGGAGACATATCCAAAGCCTGCAAG +
Preference number: 1 (lower is better)
Translates to: QHRLLLSNKEIISSH*LPGPHTGDISKACK
Trigger: CTTGCAGGCTTTGGATATGTCTCCCGTGTGCGGACCTGGGAGGCAGTGAGAACTAATTATTTCTTTGTTGCTTAACAAAAGGCGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 90 bp GGAAACCCAGCCCTGAAATGCTGCACCCAGGTAGACACCCCAGAATaGCAACTGAGGCAAGTCAAGTCATTCTTCATTCATGTAACAAGT +
Preference number: 1 (lower is better)
Translates to: GNPALKCCTQVDTPE*QLRQVKSFFIHVTS
Trigger: ACTTGTTACATGAATGAAGAATGACTTGACTTGCCTCAGTTGGCATTCTGGGGTGTCTACCTGGGTGCAGCATTTCAGGGCTGGGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp CAGAAACTGCTGAGACCTATTTCCCTTTCTTGGGGAGAGAATAAGTaGCAGCTGATTAAAGGCAGAGACACAGGACTGCTTTCAGGCTCC +
Preference number: 1 (lower is better)
Translates to: QKLLRPISLSWGENK*QLIKGRDTGLLSGS
Trigger: GGAGCCTGAAAGCAGTCCTGTGTCTCTGCCTTTAATCAGCTGTCACTTATTCTCTCCCCAAGAAAGGGAAATAGGTCTCAGCAGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp GGAGACTCAAACTTACTGAAGCTAGAGATGGGTGAGATCTGGGTTTaGCAGTTGGTAAGGACTGCAGCAGGAGAGTTATCTATGTATCCC +
Preference number: 1 (lower is better)
Translates to: GDSNLLKLEMGEIWV*QLVRTAAGELSMYP
Trigger: GGGATACATAGATAACTCTCCTGCTGCAGTCCTTACCAACTGCCAAACCCAGATCTCACCCATCTCTAGCTTCAGTAAGTTTGAGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR TCA 90 bp CTGAGTGGGGCTAATAGAACTGGTAGTACTCTTTATAAGCCTGTCTaGGGACAGAGTCCATCCATCTGCTACAAAGACAACTCTGCTCAG +
Preference number: 1 (lower is better)
Translates to: LSGANRTGSTLYKPV*GQSPSICYKDNSAQ
Trigger: CTGAGCAGAGTTGTCTTTGTAGCAGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTATTAGCCCCACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp GTAAGACTCCTACCCTTAGATTCCCAAAAGAGCACAGACAGCCCTTaGAACCAAACTCAATTTTTCTCCAAGGGCTTGGGTCAAGTTTCA +
Preference number: 1 (lower is better)
Translates to: VRLLPLDSQKSTDSP*NQTQFFSKGLGQVS
Trigger: TGAAACTTGACCCAAGCCCTTGGAGAAAAATTGAGTTTGGTTCCAAGGGCTGTCTGTGCTCTTTTGGGAATCTAAGGGTAGGAGTCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 90 bp TGCTATAAGAAAAGTAACTGTCACACGGACTTTAAGCACCTGTGTTaGCACAATTACTCAGCATCTTCTCTCCCTGCGGGCAGAAGCAAA +
Preference number: 1 (lower is better)
Translates to: CYKKSNCHTDFKHLC*HNYSASSLPAGRSK
Trigger: TTTGCTTCTGCCCGCAGGGAGAGAAGATGCTGAGTAATTGTGCCAACACAGGTGCTTAAAGTCCGTGTGACAGTTACTTTTCTTATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp AATTCCAACAGAAAGCACATGAACCCTTGTAACAACTGCAGGGGCTaGGTGGGGCTAATAGAACTGGTAGTACTCTTTATAAGCCTGTCT +
Preference number: 1 (lower is better)
Translates to: NSNRKHMNPCNNCRG*VGLIELVVLFISLS
Trigger: AGACAGGCTTATAAAGAGTACTACCAGTTCTATTAGCCCCACTCAGCCCCTGCAGTTGTTACAAGGGTTCATGTGCTTTCTGTTGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp GTTATAAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTaGTATCTACTCCCAGCTTCCTCATTACCAGCTCATTACCAGGAT +
Preference number: 1 (lower is better)
Translates to: VINQSGHVTQQLSTP*YLLPASSLPAHYQD
Trigger: ATCCTGGTAATGAGCTGGTAATGAGGAAGCTGGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTTATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp GTATCAAAGGGAGTAAATATGCCACAACGTTTTGTGCACATTAACTaGCCCAGATCTGTAAGACTCCTACCCTTAGATTCCCAAAAGAGC +
Preference number: 1 (lower is better)
Translates to: VSKGVNMPQRFVHIN*PRSVRLLPLDSQKS
Trigger: GCTCTTTTGGGAATCTAAGGGTAGGAGTCTTACAGATCTGGGTCAGTTAATGTGCACAAAACGTTGTGGCATATTTACTCCCTTTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 90 bp TGGAATCAAGAAAATGACCACAAGTATTTTCTCACTACTGTTCTCTaGATAAGTCCTGGTCCCATGAGTTCTAAGGGAATGGAAGCTGCT +
Preference number: 1 (lower is better)
Translates to: WNQENDHKYFLTTVL*ISPGPMSSKGMEAA
Trigger: AGCAGCTTCCATTCCCTTAGAACTCATGGGACCAGGACTTATGCAGAGAACAGTAGTGAGAAAATACTTGTGGTCATTTTCTTGATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 90 bp AGAAAGTTAGGCAAGAACATAAAAACCACCTGTATCCTACTTTGCTaGGATAACTATTACTCTTGTGCTATTTATCTTTCCTTCCAGACA +
Preference number: 1 (lower is better)
Translates to: RKLGKNIKTTCILLC*DNYYSCAIYLSFQT
Trigger: TGTCTGGAAGGAAAGATAAATAGCACAAGAGTAATAGTTATCTCAGCAAAGTAGGATACAGGTGGTTTTTATGTTCTTGCCTAACTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGCAGGTCTGGCGGGGGTaGGGCTCAGAAGGTGGCCAA +
Preference number: 2 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEQVWRG*GSEGGQ
Trigger: TTGGCCACCTTCTGAGCCCCACCCCCGCCAGACCTG...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGCCTCTTCACCAGGTCTaGCGGGGGTGGGGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEPLHQV*RGWGSE
Trigger: TTCTGAGCCCCACCCCCGCCAGACCTGGTGAAGAGG...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGAGGCTGGAGGGACATaGAGCCCCCTCTTCCAGACA +
Preference number: 2 (lower is better)
Translates to: LVNLPTSISQQTIAETDGEAGGT*SPLFQT
Trigger: TGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 90 bp GGGAAACAGTGCTGGCCTGGCCAGGTCTCCACAACTCTGCCTCCTTaGACAGGCATGGCCCTTTCGGTGTTGGTGCTCCTGCTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: GKQCWPGQVSTTLPP*TGMALSVLVLLLLA
Trigger: AGCCAGAAGCAGGAGCACCAACACCGAAAGGGCCATGCCTGTCAAAGGAGGCAGAGTTGTGGAGACCTGGCCAGGCCAGCACTGTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGCCCCAGCCTCACCTGTaGTTAATAAGCCTGCCCGCT +
Preference number: 2 (lower is better)
Translates to: LVNLPTSISQQTIAETDGPQPHL*LISLPA
Trigger: AGCGGGCAGGCTTATTAAGCACAGGTGAGGCTGGGG...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGTGGGGCTCAGAAGGTaGCCAACCCACCCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPVGLRR*PTHPLS
Trigger: GCTCAGAGGGTGGGTTGGCCACCTTCTGAGCCCCAC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGCAGGACTCTTACAGGTaGCTGGCTTGGAGGGGAACC +
Preference number: 2 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEQDSYR*LAWRGT
Trigger: GGTTCCCCTCCAAGCCAGTCACCTGTAAGAGTCCTG...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCGCAGGAGCAAGAGGATaGCTGGACTGGTCCTCACAG +
Preference number: 2 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFAGARG*LDWSSQ
Trigger: CTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGC...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGAGAAGGGTTCTTGGTaGTGCAGGGCATGGAACCTG +
Preference number: 2 (lower is better)
Translates to: LVNLPTSISQQTIAETDGEKGSW*CRAWNL
Trigger: CAGGTTCCATGCCCTGCATCACCAAGAACCCTTCTC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATTAGGGTCCCTGTTCTaGCCTCTGTCCAGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPLGSLF*PLSSPS
Trigger: GCTGGGGCTGGACAGAGGGCAGAACAGGGACCCTAA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGGCACAGTTGAGCACTaGATTCAGGTAGAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: LVNLPTSISQQTIAETDGGTVEH*IQVEEG
Trigger: GCCCTCCTCTACCTGAATCCAGTGCTCAACTGTGCC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCAGGAAGAAGATGATCTaGTGGCCGTGGGTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFRKKMI*WPWVSG
Trigger: CCCAGACACCCACGGCCATCAGATCATCTTCTTCCT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGACAGCCCAGGTCTTGTTaGCGGGGCACAGTTGAGCAC +
Preference number: 2 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRQPRSC*RGTVEH
Trigger: GTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCAGGTCTGGCGGGGGTaGGGCTCAGAAGGTGGCCAA +
Preference number: 2 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAQVWRG*GSEGGQ
Trigger: TTGGCCACCTTCTGAGCCCCACCCCCGCCAGACCTG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCGGCACAGTTGAGCACTaGATTCAGGTAGAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFGTVEH*IQVEEG
Trigger: GCCCTCCTCTACCTGAATCCAGTGCTCAACTGTGCC...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGCAAGAGCCCAGGCTCTaGAATCAGATGGCCAGGATT +
Preference number: 2 (lower is better)
Translates to: LVNLPTSISQQTIAETDGQEPRL*NQMARI
Trigger: AATCCTGGCCATCTGATTCCAGAGCCTGGGCTCTTG...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTATGGCCGTGGGTGTCTaGGAAGCTCTTCGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: DAGHGTWTPSALLLCALSMAVGV*EALRGL
Trigger: GAGGCCACGAAGAGCTTCCCAGACACCCACGGCCAT...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGCGTAGGGCCCAGGCATaGTCTTGTGTCTTAAGACAG +
Preference number: 2 (lower is better)
Translates to: LVNLPTSISQQTIAETDGRRAQA*SCVLRQ
Trigger: CTGTCTTAAGACACAAGACCATGCCTGGGCCCTACG...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCGAGGCTGGAGGGACATaGAGCCCCCTCTTCCAGACA +
Preference number: 2 (lower is better)
Translates to: LCLISLPAPSLATLHGCLEAGGT*SPLFQT
Trigger: TGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTC...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCAGGGAACTGGAAAGCTaGCTGGTGTCTCAAGAAGCC +
Preference number: 2 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFRELES*LVSQEA
Trigger: GGCTTCTTGAGACACCAGGCAGCTTTCCAGTTCCCT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGGTGGGGCTCAGAAGGTaGCCAACCCACCCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVVGLRR*PTHPLS
Trigger: GCTCAGAGGGTGGGTTGGCCACCTTCTGAGCCCCAC...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGCTCACCTTCTTTGCATaGCTTCCTAGACTGCAGGAC +
Preference number: 2 (lower is better)
Translates to: LVNLPTSISQQTIAETDGLTFFA*LPRLQD
Trigger: GTCCTGCAGTCTAGGAAGCCATGCAAAGAAGGTGAG...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGATGGCCGTGGGTGTCTaGGAAGCTCTTCGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEMAVGV*EALRGL
Trigger: GAGGCCACGAAGAGCTTCCCAGACACCCACGGCCAT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCGTAGGGCCCAGGCATaGTCTTGTGTCTTAAGACAG +
Preference number: 2 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFRRAQA*SCVLRQ
Trigger: CTGTCTTAAGACACAAGACCATGCCTGGGCCCTACG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACCAGCACTTGCTCCCTaGAGTTCGGAAGCCATTGCA +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPPALAP*SSEAIA
Trigger: TGCAATGGCTTCCGAACTCCAGGGAGCAAGTGCTGG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCGGCCAACCCACCCTCTaGGCCCAAATATTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRGQPTL*AQILFP
Trigger: TGGGAACAATATTTGGGCTCAGAGGGTGGGTTGGCC...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGGCAGGAGCAAGAGGATaGCTGGACTGGTCCTCACAG +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEAGARG*LDWSSQ
Trigger: CTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGC...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGTATTCTCTGATAGACTaGGCTCCTTCCACCAGAAGG +
Preference number: 2 (lower is better)
Translates to: LVNLPTSISQQTIAETDGYSLID*APSTRR
Trigger: CCTTCTGGTGGAAGGAGCTCAGTCTATCAGAGAATA...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATTCTTTAGGGAACAGTaGTCTTCAGGTGCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPFFREQ*SSGAGP
Trigger: GGGGCCTGCACCTGAAGATCACTGTTCCCTAAAGAA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCCAGCCCTGAAATGCTaGACCCAGGTAGACACCCCA +
Preference number: 2 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQPALKC*TQVDTP
Trigger: TGGGGTGTCTACCTGGGTGCAGCATTTCAGGGCTGG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGGCCAACCCACCCTCTaGGCCCAAATATTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQGQPTL*AQILFP
Trigger: TGGGAACAATATTTGGGCTCAGAGGGTGGGTTGGCC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGTTGAAGACAGGGTTATaGTCCTCTTCACCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEELKTGL*SSSPGL
Trigger: CAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAA...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGCTTCCAACTTGCTGCTaGAATCCCAGTGTTCTTGAA +
Preference number: 2 (lower is better)
Translates to: LVNLPTSISQQTIAETDGLPTCC*NPSVLE
Trigger: TTCAAGAACACTGGGATTTCAGCAGCAAGTTGGAAG...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGCAGGACTCTTACAGGTaGCTGGCTTGGAGGGGAACC +
Preference number: 2 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVQDSYR*LAWRGT
Trigger: GGTTCCCCTCCAAGCCAGTCACCTGTAAGAGTCCTG...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGCTCCCAGGTCAGTCTaGGAGTTAATGAAGAGATTA +
Preference number: 2 (lower is better)
Translates to: LVNLPTSISQQTIAETDGAPRSV*ELMKRL
Trigger: TAATCTCTTCATTAACTCTCAGACTGACCTGGGAGC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGATCATGCCCCAGGGATaGGCTAGGACTACAGTGGTG +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEIMPQG*ARTTVV
Trigger: CACCACTGTAGTCCTAGCTCATCCCTGGGGCATGAT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCGCCATGGGCAGGTACTaGCTGAAGATGCAATCCAAC +
Preference number: 2 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRAMGRY*LKMQSN
Trigger: GTTGGATTGCATCTTCAGTCAGTACCTGCCCATGGC...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGAGGAAGAAGATGATCTaGTGGCCGTGGGTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGERKKMI*WPWVSG
Trigger: CCCAGACACCCACGGCCATCAGATCATCTTCTTCCT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGACCTCTTCTGTCTTTaGGGGACAGAGACCAAGCTA +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPDLFCL*GTETKL
Trigger: TAGCTTGGTCTCTGTCCCTCAAAGACAGAAGAGGTC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCGGCTGTGCAAAATCATaGTTAGGGAAGGGTTGCAGA +
Preference number: 2 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFGCAKS*LGKGCR
Trigger: TCTGCAACCCTTCCCTAAGCATGATTTTGCACAGCC...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAATAATTAGTTCTCACTaGCTCCCAGGTCCGCACACG +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPIISSH*LPGPHT
Trigger: CGTGTGCGGACCTGGGAGGCAGTGAGAACTAATTAT...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGCCAGCCCTGAAATGCTaGACCCAGGTAGACACCCCA +
Preference number: 2 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVPALKC*TQVDTP
Trigger: TGGGGTGTCTACCTGGGTGCAGCATTTCAGGGCTGG...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGAACCCAGCCCTGAAATaGTGCACCCAGGTAGACACC +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGENPALK*CTQVDT
Trigger: GGTGTCTACCTGGGTGCAGCATTTCAGGGCTGGGTT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCAAGAGCCCAGGCTCTaGAATCAGATGGCCAGGATT +
Preference number: 2 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRQEPRL*NQMARI
Trigger: AATCCTGGCCATCTGATTCCAGAGCCTGGGCTCTTG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCCTGGGAAGCTCTTCGTaGCCTCAATGCCCTCCTTTA +
Preference number: 2 (lower is better)
Translates to: LCLISLPAPSLATLHGCLLGSSS*PQCPPL
Trigger: TAAAGGAGGGCATTGAGGCCACGAAGAGCTTCCCAG...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 90 bp CTGGCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTaGGGCTCTGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGC +
Preference number: 2 (lower is better)
Translates to: LAVMSYNTWIFLGVV*GSAVGYYLAYPLLS
Trigger: GCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGTTTGTGCACATTAACTaGCCCAGATCTGTAAGACTC +
Preference number: 2 (lower is better)
Translates to: LVNLPTSISQQTIAETDGFVHIN*PRSVRL
Trigger: GAGTCTTACAGATCTGGGTCAGTTAATGTGCACAAA...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGAACAACTGCAGGGGCTaGGTGGGGCTAATAGAACTG +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGENNCRG*VGLIEL
Trigger: CAGTTCTATTAGCCCCACTCAGCCCCTGCAGTTGTT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGAGAGCTCATGTCTCCTaGTGCCCAGGCCAAAGCACT +
Preference number: 2 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVRAHVS*CPGQST
Trigger: AGTGCTTTGGCCTGGGCATCAGGAGACATGAGCTCT...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATGCTTAGGGAAGGGTTaGAGAGAAACCTTTGCACCA +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPCLGKG*RETFAP
Trigger: TGGTGCAAAGGTTTCTCTGCAACCCTTCCCTAAGCA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGCATGGCTTCCTAGACTaGAGGACTAAGCCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEHGFLD*RTKPAG
Trigger: TCCTGCAGGCTTAGTCCTGCAGTCTAGGAAGCCATG...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTATAATTAGTTCTCACTaGCTCCCAGGTCCGCACACG +
Preference number: 2 (lower is better)
Translates to: DAGHGTWTPSALLLCALSIISSH*LPGPHT
Trigger: CGTGTGCGGACCTGGGAGGCAGTGAGAACTAATTAT...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGGCATTCCCCCATGTTTaGAGGGAACTGGAAAGCTGC +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEAFPHV*RELESC
Trigger: GCAGCTTTCCAGTTCCCTGCAAACATGGGGGAATGC...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTGTAGACACCCCAGAATaGCAACTGAGGCAAGTCAAG +
Preference number: 2 (lower is better)
Translates to: DAGHGTWTPSALLLCALSVDTPE*QLRQVK
Trigger: CTTGACTTGCCTCAGTTGGCATTCTGGGGTGTCTAC...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTCTACAAAGACAACTCTaGTCAGGGAAACCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: DAGHGTWTPSALLLCALSLQRQL*SGKPSP
Trigger: AGGGCTGGGTTTCCCTGAGCAGAGTTGTCTTTGTAG...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAAGCTCTCCTGCTTTGTaGCTTATCTACAGGAGCATC +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPSSPAL*LIYRSI
Trigger: GATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCT...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCGAGTTCGGAAGCCATTaGAGCAACCTTCCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: LCLISLPAPSLATLHGCLEFGSH*SNLPSQ
Trigger: CTGAGAAGGAAGGTTGCTGCAATGGCTTCCGAACTC...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGACTCTTACAGGTGACTaGCTTGGAGGGGAACCTACC +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGETLTGD*LGGEPT
Trigger: GGTAGGTTCCCCTCCAAGCCAGTCACCTGTAAGAGT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTCACTGTCTTCTGCAGTaGTTGCTGGAGATAAGCCAG +
Preference number: 2 (lower is better)
Translates to: DAGHGTWTPSALLLCALSHCLLQ*LLEISQ
Trigger: CTGGCTTATCTCCAGCAACCACTGCAGAAGACAGTG...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCCACTGTCTTCTGCAGTaGTTGCTGGAGATAAGCCAG +
Preference number: 2 (lower is better)
Translates to: LCLISLPAPSLATLHGCLHCLLQ*LLEISQ
Trigger: CTGGCTTATCTCCAGCAACCACTGCAGAAGACAGTG...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCCAGCACTTGCTCCCTaGAGTTCGGAAGCCATTGCA +
Preference number: 2 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAPALAP*SSEAIA
Trigger: TGCAATGGCTTCCGAACTCCAGGGAGCAAGTGCTGG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAACTAGCCACCCTACATaGGTGTCTCAGATCTTCACA +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPTSHPT*VSQIFT
Trigger: TGTGAAGATCTGAGACACCCATGTAGGGTGGCTAGT...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGCACAGGTACAGGCAGTaGGTATGGGAAAGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVHRYRQ*VWERGR
Trigger: TCTGCCCCTTTCCCATACCCACTGCCTGTACCTGTG...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 90 bp CTCAGGTGCCATGAACAATGGAAAGAAGGGACCCTCTCACCTTCTTaGCATGGCTTCCTAGACTGCAGGACTAAGCCTGCAGGAGCAAGA +
Preference number: 2 (lower is better)
Translates to: LRCHEQWKEGTLSPS*HGFLDCRTKPAGAR
Trigger: TCTTGCTCCTGCAGGCTTAGTCCTGCAGTCTAGGAAGCCATGCAAAGAAGGTGAGAGGGTCCCTTCTTTCCATTGTTCATGGCACCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 90 bp TCAAACCAGGAATTTCCAAAGATTTCAAGCCAGGGAGAAGGGTTCTaGGTGATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: SNQEFPKISSQGEGF*VMQGMEPGHPQLSC
Trigger: GCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATCACCAAGAACCCTTCTCCCTGGCTTGAAATCTTTGGAAATTCCTGGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCAAATCCCAGTGTTCTTaGAGACAGGGTTATGATCCT +
Preference number: 2 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFKSQCS*RQGYDP
Trigger: AGGATCATAACCCTGTCTTCAAGAACACTGGGATTT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATATCATGCCCCAGGGATaGGCTAGGACTACAGTGGTG +
Preference number: 2 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYIMPQG*ARTTVV
Trigger: CACCACTGTAGTCCTAGCTCATCCCTGGGGCATGAT...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATGCCTTTGGAACACATaGAGATCATCTCGTCTATGG +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPCLWNT*RSSRLW
Trigger: CCATAGACGAGATGATCTTCATGTGTTCCAAAGGCA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACCCAGGGTTGGCTGTaGAAAATCATGCTTAGGGAA +
Preference number: 2 (lower is better)
Translates to: DAGHGTWTPSALLLCALSTQGWL*KIMLRE
Trigger: TTCCCTAAGCATGATTTTGCACAGCCAACCCTGGGT...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTAGGGAACTGGAAAGCTaGCTGGTGTCTCAAGAAGCC +
Preference number: 2 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSARELES*LVSQEA
Trigger: GGCTTCTTGAGACACCAGGCAGCTTTCCAGTTCCCT...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGCACCCTCAGCTCTCCTaGTTTGTGCCTTATCTACAG +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEHPQLS*FVPYLQ
Trigger: CTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTG...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp GAGACCAAGAGCTCTCATGTTCCTTTGAGTCTCGGTCACCTCAACTGTAAGAGGGCAGAAGAAAGGGTCTaGTACCCCTGGCAAACAGGC +
Preference number: 2 (lower is better)
Translates to: ETKSSHVPLSLGHLNCKRAEERV*YPWQTG
Trigger: GCCTGTTTGCCAGGGGTAGCAGACCCTTTCTTCTGC...CCTCTTACAGTTGAGGTGACCGAGACTCAAAGGAACATGAGAGCTCTTGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGACTCTTACAGGTGACTaGCTTGGAGGGGAACCTACC +
Preference number: 2 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVTLTGD*LGGEPT
Trigger: GGTAGGTTCCCCTCCAAGCCAGTCACCTGTAAGAGT...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAGAGCAAGAGGATGACTaGACTGGTCCTCACAGAACC +
Preference number: 2 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEEQEDD*TGPHRT
Trigger: GGTTCTGTGAGGACCAGTCCAGTCATCCTCTTGCTC...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTAGGTGCCATGAACAATaGAAAGAAGGGACCCTCTCA +
Preference number: 2 (lower is better)
Translates to: DAGHGTWTPSALLLCALSRCHEQ*KEGTLS
Trigger: TGAGAGGGTCCCTTCTTTCCATTGTTCATGGCACCT...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCTGGGAAGCTCTTCGTaGCCTCAATGCCCTCCTTTA +
Preference number: 2 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSALGSSS*PQCPPL
Trigger: TAAAGGAGGGCATTGAGGCCACGAAGAGCTTCCCAG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGTTGAAGACAGGGTTATaGTCCTCTTCACCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQLKTGL*SSSPGL
Trigger: CAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAA...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAGCTCCCAGGTCAGTCTaGGAGTTAATGAAGAGATTA +
Preference number: 2 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRAPRSV*ELMKRL
Trigger: TAATCTCTTCATTAACTCTCAGACTGACCTGGGAGC...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGTATAGGCCAGGCTGTTaGCTGCACTGGGATTTAGAT +
Preference number: 2 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQYRPGC*LHWDLD
Trigger: ATCTAAATCCCAGTGCAGTCAACAGCCTGGCCTATA...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTATAGGCCAGGCTGTTaGCTGCACTGGGATTTAGAT +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEYRPGC*LHWDLD
Trigger: ATCTAAATCCCAGTGCAGTCAACAGCCTGGCCTATA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCTTTATAAGCCTGTCTaGGGACAGAGTCCATCCATC +
Preference number: 2 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQLYKPV*GQSPSI
Trigger: GATGGATGGACTCTGTCCTCAGACAGGCTTATAAAG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGCTTTATAAGCCTGTCTaGGGACAGAGTCCATCCATC +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGELYKPV*GQSPSI
Trigger: GATGGATGGACTCTGTCCTCAGACAGGCTTATAAAG...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGGCTGTGCAAAATCATaGTTAGGGAAGGGTTGCAGA +
Preference number: 2 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQGCAKS*LGKGCR
Trigger: TCTGCAACCCTTCCCTAAGCATGATTTTGCACAGCC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCATGGCTTCCTAGACTaGAGGACTAAGCCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYHGFLD*RTKPAG
Trigger: TCCTGCAGGCTTAGTCCTGCAGTCTAGGAAGCCATG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTGACATATCCAAAGCCTaGAAGGATGATGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSADISKA*KDDARP
Trigger: TGGCCTGGCATCATCCTTGCAGGCTTTGGATATGTC...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCGTGACAGTCAGGCTGTaGTGGCCAAGAGCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPVTVRL*WPRAQA
Trigger: AGCCTGGGCTCTTGGCCAGCACAGCCTGACTGTCAC...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATGAGCAAGAGGATGACTaGACTGGTCCTCACAGAACC +
Preference number: 2 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYEQEDD*TGPHRT
Trigger: GGTTCTGTGAGGACCAGTCCAGTCATCCTCTTGCTC...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATTGATTCATGATGGATaGCAGAAACTGCTGAGACCT +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPLIHDG*QKLLRP
Trigger: AGGTCTCAGCAGTTTCTGCCATCCATCATGAATCAA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 90 bp AGACTATGTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTaGCAGGGAACTGGAAAGCTGCCTGGTGTCTCAAGAAGCCTGTTT +
Preference number: 2 (lower is better)
Translates to: RLCHTFRTDQGIPPC*QGTGKLPGVSRSLF
Trigger: AAACAGGCTTCTTGAGACACCAGGCAGCTTTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGACATAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTGGGCAGGTACTGACTaGAGATGCAATCCAACCAAA +
Preference number: 2 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAWAGTD*RCNPTK
Trigger: TTTGGTTGGATTGCATCTTCAGTCAGTACCTGCCCA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTGCTTAGGGAAGGGTTaGAGAGAAACCTTTGCACCA +
Preference number: 2 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSACLGKG*RETFAP
Trigger: TGGTGCAAAGGTTTCTCTGCAACCCTTCCCTAAGCA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTCAGCCCAGGTCTTGTTaGCGGGGCACAGTTGAGCAC +
Preference number: 2 (lower is better)
Translates to: IELVVLFISLSEDRVHPSQPRSC*RGTVEH
Trigger: GTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCTGCCACAACGTTTTGTaGACATTAACTGACCCAGAT +
Preference number: 2 (lower is better)
Translates to: LCLISLPAPSLATLHGCLCHNVL*TLTDPD
Trigger: ATCTGGGTCAGTTAATGTGCACAAAACGTTGTGGCA...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCGCTGAAGCCAGCACTTaGTCCCTGGAGTTCGGAAGC +
Preference number: 2 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPAEAST*SLEFGS
Trigger: GCTTCCGAACTCCAGGGAGCAAGTGCTGGCTTCAGC...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATCTTCACAACTGCACTaGAAGGGAAGTATTCTCATT +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPSSQLH*KGSILI
Trigger: AATGAGAATACTTCCCTTGCAGTGCAGTTGTGAAGA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTCACCTTCTTTGCATaGCTTCCTAGACTGCAGGAC +
Preference number: 2 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYLTFFA*LPRLQD
Trigger: GTCCTGCAGTCTAGGAAGCCATGCAAAGAAGGTGAG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGAGATTCATTCCCTGTTaGCAGAACCCACCACAGGTA +
Preference number: 2 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVRFIPC*QNPPQV
Trigger: TACCTGTGGTGGGTTCTGCCAACAGGGAATGAATCT...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp TGCAGCAGGAGAGTTATCTATGTATCCCAGGGGAAACCAGTCACTAAAATCCTAAGGGTCTGCTACCCCTaGCAAACAGGCTGCTGCCAT +
Preference number: 2 (lower is better)
Translates to: CSRRVIYVSQGKPVTKILRVCYP*QTGCCH
Trigger: ATGGCAGCAGCCTGTTTGCCAGGGGTAGCAGACCCT...TAGGATTTTAGTGACTGGTTTCCCCTGGGATACATAGATAACTCTCCTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCTTGCCGGGGCACAGTTaGGCACTGGATTCAGGTAGA +
Preference number: 2 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPLPGHS*ALDSGR
Trigger: TCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAA...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACTGGAATCAAGAAAATaGCCACAAGTATTTTCTCAC +
Preference number: 2 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPLESRK*PQVFSH
Trigger: GTGAGAAAATACTTGTGGTCATTTTCTTGATTCCAG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTGATTTCATTGATTCATaGTGGATGGCAGAAACTGCT +
Preference number: 2 (lower is better)
Translates to: DAGHGTWTPSALLLCALSDFIDS*WMAETA
Trigger: AGCAGTTTCTGCCATCCATCATGAATCAATGAAATC...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGAAGAATCCCTCAGGTaGCATGAACAATGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQEESLR*HEQWKE
Trigger: TTCTTTCCATTGTTCATGGCACCTGAGGGATTCTTC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTCACTACTGTTCTCTaGATAAGTCCTGGTCCCATG +
Preference number: 2 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYLTTVL*ISPGPM
Trigger: CATGGGACCAGGACTTATGCAGAGAACAGTAGTGAG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCAACCCAGCCCTGAAATaGTGCACCCAGGTAGACACC +
Preference number: 2 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPNPALK*CTQVDT
Trigger: GGTGTCTACCTGGGTGCAGCATTTCAGGGCTGGGTT...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTTGATTCATGATGGATaGCAGAAACTGCTGAGACCT +
Preference number: 2 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGELIHDG*QKLLRP
Trigger: AGGTCTCAGCAGTTTCTGCCATCCATCATGAATCAA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 90 bp TCAAACTTACTGAAGCTAGAGATGGGTGAGATCTGGGTTTGGCAGTaGGTAAGGACTGCAGCAGGAGAGTTATCTATGTATCCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: SNLLKLEMGEIWVWQ*VRTAAGELSMYPRG
Trigger: TCCCCTGGGATACATAGATAACTCTCCTGCTGCAGTCCTTACCAACTGCCAAACCCAGATCTCACCCATCTCTAGCTTCAGTAAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR-3UTR TCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTTTGCCGGGGCACAGTTaGGCACTGGATTCAGGTAGA +
Preference number: 2 (lower is better)
Translates to: IELVVLFISLSEDRVHPSLPGHS*ALDSGR
Trigger: TCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAA...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTTTGTGCACATTAACTaGCCCAGATCTGTAAGACTC +
Preference number: 2 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAFVHIN*PRSVRL
Trigger: GAGTCTTACAGATCTGGGTCAGTTAATGTGCACAAA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCAACAACTGCAGGGGCTaGGTGGGGCTAATAGAACTG +
Preference number: 2 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPNNCRG*VGLIEL
Trigger: CAGTTCTATTAGCCCCACTCAGCCCCTGCAGTTGTT...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCACCTCACAGATTAGATaGAAAGATGGTTGTAAGCTT +
Preference number: 2 (lower is better)
Translates to: LCLISLPAPSLATLHGCLTSQIR*KDGCKL
Trigger: AAGCTTACAACCATCTTTTCATCTAATCTGTGAGGT...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCATTCACTTAAAATACTaGTTAAGCCATGGGCAGGTA +
Preference number: 2 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRIHLKY*LSHGQV
Trigger: TACCTGCCCATGGCTTAATCAGTATTTTAAGTGAAT...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGTGCCACAACGTTTTGTaGACATTAACTGACCCAGAT +
Preference number: 2 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVCHNVL*TLTDPD
Trigger: ATCTGGGTCAGTTAATGTGCACAAAACGTTGTGGCA...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCCTCACAGAACCATCATaGCCCAGGGATGAGCTAGGA +
Preference number: 2 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPLTEPS*PRDELG
Trigger: TCCTAGCTCATCCCTGGGGCATGATGGTTCTGTGAG...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp CCAAATCTGCCAATTTCCAAGGATGCCTCTCCCCTGCTAGATTCTGAAGCTAATCATAGTAATTCTCCATaGAGGAGAGGAGGGATGGGG +
Preference number: 2 (lower is better)
Translates to: PNLPISKDASPLLDSEANHSNSP*RRGGMG
Trigger: CCCCATCCCTCCTCTCCTCCATGGAGAATTACTATG...ATTAGCTTCAGAATCTAGCAGGGGAGAGGCATCCTTGGAAATTGGCAGATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCATCCCTCAGGTGCCATaGACAATGGAAAGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPIPQVP*TMERRD
Trigger: GTCCCTTCTTTCCATTGTTCATGGCACCTGAGGGAT...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCTGGAATCAAGAAAATaGCCACAAGTATTTTCTCAC +
Preference number: 2 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQLESRK*PQVFSH
Trigger: GTGAGAAAATACTTGTGGTCATTTTCTTGATTCCAG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAACTGGAAACTTTGAGCTaGAGCCAGCACTTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQELETLS*SQHLLP
Trigger: AGGGAGCAAGTGCTGGCTTCAGCTCAAAGTTTCCAG...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACTCACTACTGTTCTCTaGATAAGTCCTGGTCCCATG +
Preference number: 2 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLLTTVL*ISPGPM
Trigger: CATGGGACCAGGACTTATGCAGAGAACAGTAGTGAG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCCTACAAAGACAACTCTaGTCAGGGAAACCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPLQRQL*SGKPSP
Trigger: AGGGCTGGGTTTCCCTGAGCAGAGTTGTCTTTGTAG...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 90 bp TGTAAGACTCCTACCCTTAGATTCCCAAAAGAGCACAGACAGCCCTaGGAACCAAACTCAATTTTTCTCCAAGGGCTTGGGTCAAGTTTC +
Preference number: 2 (lower is better)
Translates to: CKTPTLRFPKEHRQP*EPNSIFLQGLGSSF
Trigger: GAAACTTGACCCAAGCCCTTGGAGAAAAATTGAGTTTGGTTCCAAGGGCTGTCTGTGCTCTTTTGGGAATCTAAGGGTAGGAGTCTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAACCCCAGAATGCCAACTaGGGCAAGTCAAGTCATTCT +
Preference number: 2 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEPQNAN*GKSSHS
Trigger: AGAATGACTTGACTTGCCTCAGTTGGCATTCTGGGG...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp GAGACCAAGAGCTCTCATGTTCCTTTGAGTCTCGGTCACCTCAACTGTAAGAGGGGAACTGCTACTGTATaGAATGTACAGGAAGAAGAA +
Preference number: 2 (lower is better)
Translates to: ETKSSHVPLSLGHLNCKRGTATV*NVQEEE
Trigger: TTCTTCTTCCTGTACATTTCATACAGTAGCAGTTCC...CCTCTTACAGTTGAGGTGACCGAGACTCAAAGGAACATGAGAGCTCTTGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAGAAGAATCCCTCAGGTaGCATGAACAATGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLEESLR*HEQWKE
Trigger: TTCTTTCCATTGTTCATGGCACCTGAGGGATTCTTC...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAATCTTCGTGGCCTCAATaGCCTCCTTTATCCTCATCT +
Preference number: 2 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQESSWPQ*PPLSSS
Trigger: AGATGAGGATAAAGGAGGGCATTGAGGCCACGAAGA...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAAGCTCTCCTGCTTTGTaGCTTATCTACAGGAGCATC +
Preference number: 2 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQESSPAL*LIYRSI
Trigger: GATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAACCAACAGAAAGCACATaGACCCTTGTAACAACTGCA +
Preference number: 2 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEPTEST*TLVTTA
Trigger: TGCAGTTGTTACAAGGGTTCATGTGCTTTCTGTTGG...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAATGCCTTTGGAACACATaGAGATCATCTCGTCTATGG +
Preference number: 2 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQECLWNT*RSSRLW
Trigger: CCATAGACGAGATGATCTTCATGTGTTCCAAAGGCA...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAAGAATAAGTGACAGCTaGTTAAAGGCAGAGACACAG +
Preference number: 2 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQERISDS*LKAETQ
Trigger: CTGTGTCTCTGCCTTTAATCAGCTGTCACTTATTCT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp TGCAGCAGGAGAGTTATCTATGTATCCCAGGGGAAACCAGTCACTAAAATCCTATGCAGAATGTTAGCCTaGCAACTTTTAGTAGAAAAG +
Preference number: 2 (lower is better)
Translates to: CSRRVIYVSQGKPVTKILCRMLA*QLLVEK
Trigger: CTTTTCTACTAAAAGTTGGCAGGCTAACATTCTGCA...TAGGATTTTAGTGACTGGTTTCCCCTGGGATACATAGATAACTCTCCTGCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAACCTCACAGATTAGATaGAAAGATGGTTGTAAGCTT +
Preference number: 2 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQETSQIR*KDGCKL
Trigger: AAGCTTACAACCATCTTTTCATCTAATCTGTGAGGT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTTTTTCTCCAAGGGCTTaGGTCAAGTTTCATTATAGA +
Preference number: 2 (lower is better)
Translates to: IELVVLFISLSEDRVHPSFSPRA*VKFHYR
Trigger: TCTATAATGAAACTTGACCCAAGCCCTTGGAGAAAA...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAATTTTCTCCAAGGGCTTaGGTCAAGTTTCATTATAGA +
Preference number: 2 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEFSPRA*VKFHYR
Trigger: TCTATAATGAAACTTGACCCAAGCCCTTGGAGAAAA...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR GCA 90 bp GTTAGCCTGCCAACTTTTAGTAGAAAAGAATACAGAAGAACGCGAATATACACGCTGACTTTGGGGAACTaGTACTGTATGAAATGTACA +
Preference number: 2 (lower is better)
Translates to: VSLPTFSRKEYRRTRIYTLTLGN*YCMKCT
Trigger: TGTACATTTCATACAGTAGCAGTTCCCCAAAGTCAG...CGTGTATATTCGCGTTCTTCTGTATTCTTTTCTACTAAAAGTTGGCAGGCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR-3UTR CCA 90 bp GTTAGCCTGCCAACTTTTAGTAGAAAAGAATACAGAAGAACGCGAATATACACGAGGTTATCCTTTGCCTaGTTTAGAGATGAGAAAGTG +
Preference number: 2 (lower is better)
Translates to: VSLPTFSRKEYRRTRIYTRLSFA*FRDEKV
Trigger: CACTTTCTCATCTCTAAACCAGGCAAAGGATAACCT...CGTGTATATTCGCGTTCTTCTGTATTCTTTTCTACTAAAAGTTGGCAGGCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR-3UTR TCA 90 bp GTTAGCCTGCCAACTTTTAGTAGAAAAGAATACAGAAGAACGCGAATATACACGAAAAATTACAAACTCTaGCTTTGGGGAACTGCTACT +
Preference number: 2 (lower is better)
Translates to: VSLPTFSRKEYRRTRIYTKNYKL*LWGTAT
Trigger: AGTAGCAGTTCCCCAAAGTCAGAGTTTGTAATTTTT...CGTGTATATTCGCGTTCTTCTGTATTCTTTTCTACTAAAAGTTGGCAGGCTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR TCA 72 bp GAGACCTCAGCCCAGGTCTTGTTGCCGGGGCACAGTTaGGCACTGGATTCAGGTAGAGGAGGGCTCCCAGGT +
Preference number: 3 (lower is better)
Translates to: ETSAQVLLPGHS*ALDSGRGGLPG
Trigger: ACCTGGGAGCCCTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTGAGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp CCACCAGAAGGCACTGCCTGCAGGAAGAAGATGATCTaGTGGCCGTGGGTGTCTGGGAAGCTCTTCGTGGCC +
Preference number: 3 (lower is better)
Translates to: PPEGTACRKKMI*WPWVSGKLFVA
Trigger: GGCCACGAAGAGCTTCCCAGACACCCACGGCCATCAGATCATCTTCTTCCTGCAGGCAGTGCCTTCTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 72 bp GAAGCCAGCACTTGCTCCCTGGAGTTCGGAAGCCATTaGAGCAACCTTCCTTCTCAGCCAGCCTACGTAGGG +
Preference number: 3 (lower is better)
Translates to: EASTCSLEFGSH*SNLPSQPAYVG
Trigger: CCCTACGTAGGCTGGCTGAGAAGGAAGGTTGCTGCAATGGCTTCCGAACTCCAGGGAGCAAGTGCTGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 72 bp CAGCCAGCAGACCATCGCAGAGACAGACGGGGACTCTaGAGGCTCAGATTCATTCCCTGTTGGCAGAACCCA +
Preference number: 3 (lower is better)
Translates to: QPADHRRDRRGL*RLRFIPCWQNP
Trigger: TGGGTTCTGCCAACAGGGAATGAATCTGAGCCTGCAGAGTCCCCGTCTGTCTCTGCGATGGTCTGCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACGCCTAGACCCAGGGTaGGCTGTGCAAAATCATGCT +
Preference number: 3 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPRLDPG*AVQNHA
Trigger: AGCATGATTTTGCACAGCCAACCCTGGGTCTAGGCG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCACCCTCTCACCTTCTTaGCATGGCTTCCTAGACTGC +
Preference number: 3 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFTLSPS*HGFLDC
Trigger: GCAGTCTAGGAAGCCATGCAAAGAAGGTGAGAGGGT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACAGGGAGAAGGGTTCTaGGTGATGCAGGGCATGGAA +
Preference number: 3 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPQGEGF*VMQGME
Trigger: TTCCATGCCCTGCATCACCAAGAACCCTTCTCCCTG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp TCCTTCCACCAGAAGGCACTGCCTGCAGGAAGAAGATaGTCTGATGGCCGTGGGTGTCTGGGAAGCTCTTCG +
Preference number: 3 (lower is better)
Translates to: SFHQKALPAGRR*SDGRGCLGSSS
Trigger: CGAAGAGCTTCCCAGACACCCACGGCCATCAGATCATCTTCTTCCTGCAGGCAGTGCCTTCTGGTGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp ACAGTGATCTTCAGGTGCAGGCCCCTATCTAGCAAATaGGGTGGCCACCCACCCTCCCCCAAATCTCACCAG +
Preference number: 3 (lower is better)
Translates to: TVIFRCRPLSSK*GGHPPSPKSHQ
Trigger: CTGGTGAGATTTGGGGGAGGGTGGGTGGCCACCTCATTTGCTAGATAGGGGCCTGCACCTGAAGATCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTaGACTGGTCCTCACAGAACCATCATGCCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: TAGLSLQEQEDD*TGPHRTIMPQG
Trigger: TCCCTGGGGCATGATGGTTCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp GTTGGCAGAACCCACCACAGGTACAGGCAGTGGGTATaGGAAAGGGGCAGAAGCCTCACATTCACCCTGAGA +
Preference number: 3 (lower is better)
Translates to: VGRTHHRYRQWV*ERGRSLTFTLR
Trigger: TCTCAGGGTGAATGTGAGGCTTCTGCCCCTTTCCCATACCCACTGCCTGTACCTGTGGTGGGTTCTGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp TTCCCTGTTGGCAGAACCCACCACAGGTACAGGCAGTaGGTATGGGAAAGGGGCAGAAGCCTCACATTCACC +
Preference number: 3 (lower is better)
Translates to: FPVGRTHHRYRQ*VWERGRSLTFT
Trigger: GGTGAATGTGAGGCTTCTGCCCCTTTCCCATACCCACTGCCTGTACCTGTGGTGGGTTCTGCCAACAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp CTAGACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATaGCTGGACTGGTCCTCACAGAACCATCATGCCCCA +
Preference number: 3 (lower is better)
Translates to: LDCRTKPAGARG*LDWSSQNHHAP
Trigger: TGGGGCATGATGGTTCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 72 bp TTAGTTCTACCAGGGAGACCTCAGCCCAGGTCTTGTTaGCGGGGCACAGTTGAGCACTGGATTCAGGTAGAG +
Preference number: 3 (lower is better)
Translates to: LVLPGRPQPRSC*RGTVEHWIQVE
Trigger: CTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTGAGGTCTCCCTGGTAGAACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 72 bp GCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTaGCTTATCTACAGGAGCATCGCCCATTGGACTTCC +
Preference number: 3 (lower is better)
Translates to: AWNLDTLSSPAL*LIYRSIAHWTS
Trigger: GGAAGTCCAATGGGCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp GGGAGAAGGGTTCTTGGTGATGCAGGGCATGGAACCTaGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCT +
Preference number: 3 (lower is better)
Translates to: GRRVLGDAGHGT*TPSALLLCALS
Trigger: AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATCACCAAGAACCCTTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGCGCCTAGACCCAGGGTaGGCTGTGCAAAATCATGCT +
Preference number: 3 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGERLDPG*AVQNHA
Trigger: AGCATGATTTTGCACAGCCAACCCTGGGTCTAGGCG...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCAGTCCTTCTTCCAACTaGCTGCTGAAATCCCAGTGT +
Preference number: 3 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFSPSSN*LLKSQC
Trigger: ACACTGGGATTTCAGCAGCAAGTTGGAAGAAGGACT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCACACCTGGATTTTCCTaGGTGTGGTCTTGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: LCLISLPAPSLATLHGCLTPGFS*VWSWAL
Trigger: CAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGT...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp CTGCAGGAAGAAGATGATCTGATGGCCGTGGGTGTCTaGGAAGCTCTTCGTGGCCTCAATGCCCTCCTTTAT +
Preference number: 3 (lower is better)
Translates to: LQEEDDLMAVGV*EALRGLNALLY
Trigger: ATAAAGGAGGGCATTGAGGCCACGAAGAGCTTCCCAGACACCCACGGCCATCAGATCATCTTCTTCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp CCTGGAAACTTTGAGCTGAAGCCAGCACTTGCTCCCTaGAGTTCGGAAGCCATTGCAGCAACCTTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: PGNFELKPALAP*SSEAIAATFLL
Trigger: GAGAAGGAAGGTTGCTGCAATGGCTTCCGAACTCCAGGGAGCAAGTGCTGGCTTCAGCTCAAAGTTTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp GCTGGCCGTAATGTCCTACAACACCTGGATTTTCCTTaGTGTGGTCTTGGGCTCTGCTGTGGGCTACTACCT +
Preference number: 3 (lower is better)
Translates to: AGRNVLQHLDFP*CGLGLCCGLLP
Trigger: AGGTAGTAGCCCACAGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp AATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATaGGTGTCTCAGATCTTCACAACTGCACTGCAAGGG +
Preference number: 3 (lower is better)
Translates to: NKPARSITSHPT*VSQIFTTALQG
Trigger: CCCTTGCAGTGCAGTTGTGAAGATCTGAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp ATCTGCAGCTGTCCTGAAGCAATGTATCCCACTTGGTaGGAGGAGGATGACAAGCTCTCCTCTCCTCCCTTC +
Preference number: 3 (lower is better)
Translates to: ICSCPEAMYPTW*EEDDKLSSPPF
Trigger: GAAGGGAGGAGAGGAGAGCTTGTCATCCTCCTCCCACCAAGTGGGATACATTGCTTCAGGACAGCTGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp GTGGCTTCTTCACCCTCAGCCCCTGGATTTTTCAGGTaGCTTCTCTTCCTGATCTCAAAGCCACACTCCAGC +
Preference number: 3 (lower is better)
Translates to: VASSPSAPGFFR*LLFLISKPHSS
Trigger: GCTGGAGTGTGGCTTTGAGATCAGGAAGAGAAGCCACCTGAAAAATCCAGGGGCTGAGGGTGAAGAAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGACCCTCTCACCTTCTTaGCATGGCTTCCTAGACTGC +
Preference number: 3 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGETLSPS*HGFLDC
Trigger: GCAGTCTAGGAAGCCATGCAAAGAAGGTGAGAGGGT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCTCACCTTTCTGCCTTaGGAACACATGAAGATCATC +
Preference number: 3 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFLTFLP*EHMKII
Trigger: GATGATCTTCATGTGTTCCAAAGGCAGAAAGGTGAG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGGGCCCAGGCATGGTCTaGTGTCTTAAGACAGCTGCT +
Preference number: 3 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVGPGMV*CLKTAA
Trigger: AGCAGCTGTCTTAAGACACAAGACCATGCCTGGGCC...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp TTCCAAAGATTTCAAGCCAGGGAGAAGGGTTCTTGGTaGTGCAGGGCATGGAACCTGGACACCCTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: FQRFQAREKGSW*CRAWNLDTLSS
Trigger: AGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATCACCAAGAACCCTTCTCCCTGGCTTGAAATCTTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 72 bp GGTTCGCCTAGACCCAGGGTTGGCTGTGCAAAATCATaGTTAGGGAAGGGTTGCAGAGAAACCTTTGCACCA +
Preference number: 3 (lower is better)
Translates to: GSPRPRVGCAKS*LGKGCRETFAP
Trigger: TGGTGCAAAGGTTTCTCTGCAACCCTTCCCTAAGCATGATTTTGCACAGCCAACCCTGGGTCTAGGCGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 72 bp TCACTTAACAAGAAGTCACGACAGATTTGTGCAGCCTaGTGGGGGAGTGGGTGGGGTAATGGTACGTGGCTT +
Preference number: 3 (lower is better)
Translates to: SLNKKSRQICAA*WGSGWGNGTWL
Trigger: AAGCCACGTACCATTACCCCACCCACTCCCCCAGCAGGCTGCACAAATCTGTCGTGACTTCTTGTTAAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp AAAAGTCTGGCAGAGGACAGGACTCTTACAGGTGACTaGCTTGGAGGGGAACCTACCAGTCCTTCTTCCAAC +
Preference number: 3 (lower is better)
Translates to: KSLAEDRTLTGD*LGGEPTSPSSN
Trigger: GTTGGAAGAAGGACTGGTAGGTTCCCCTCCAAGCCAGTCACCTGTAAGAGTCCTGTCCTCTGCCAGACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp GTGAAGACAGTGAAGAAGTTCGGAACTCAGCAAGGGTaGGGAAGAAGGTGCAGGATAGAGGTGGATGGAGTG +
Preference number: 3 (lower is better)
Translates to: VKTVKKFGTQQG*GRRCRIEVDGV
Trigger: CACTCCATCCACCTCTATCCTGCACCTTCTTCCCCACCCTTGCTGAGTTCCGAACTTCTTCACTGTCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp CTTAACAAGAAGTCACGACAGATTTGTGCAGCCTGCTaGGGGAGTGGGTGGGGTAATGGTACGTGGCTTCTT +
Preference number: 3 (lower is better)
Translates to: LNKKSRQICAAC*GSGWGNGTWLL
Trigger: AAGAAGCCACGTACCATTACCCCACCCACTCCCCCAGCAGGCTGCACAAATCTGTCGTGACTTCTTGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGGTTGCAGAGAAACCTTaGCACCAGTTTCCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVVAEKP*HQFPGS
Trigger: AGACCCAGGAAACTGGTGCAAAGGTTTCTCTGCAAC...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp ACTGCTTTCAGGCTCCTGGTTTATTCTCTGATAGACTaGGCTCCTTCCACCAGAAGGCACTGCCTGCAGGAA +
Preference number: 3 (lower is better)
Translates to: TAFRLLVYSLID*APSTRRHCLQE
Trigger: TTCCTGCAGGCAGTGCCTTCTGGTGGAAGGAGCTCAGTCTATCAGAGAATAAACCAGGAGCCTGAAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp TTCGGTGTTGGTGCTCCTGCTTCTGGCTGTACTGTATaGAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAA +
Preference number: 3 (lower is better)
Translates to: FGVGAPASGCTV*RHQGWQSQAAQ
Trigger: TTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAGTACAGCCAGAAGCAGGAGCACCAACACCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp TTCCCAGTGACAGTATGCCTTATCCACCAAGTGTGTTaGGGCAGAAGAAAGGGTCTGCTACCCCTGGCAAAC +
Preference number: 3 (lower is better)
Translates to: FPVTVCLIHQVC*GRRKGLLPLAN
Trigger: GTTTGCCAGGGGTAGCAGACCCTTTCTTCTGCCTCAACACACTTGGTGGATAAGGCATACTGTCACTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR GCA 72 bp AAGAAGTTCGGAACTCAGCAAGGGTGGGGAAGAAGGTaGAGGATAGAGGTGGATGGAGTGGATTCCATGAAC +
Preference number: 3 (lower is better)
Translates to: KKFGTQQGWGRR*RIEVDGVDSMN
Trigger: GTTCATGGAATCCACTCCATCCACCTCTATCCTGCACCTTCTTCCCCACCCTTGCTGAGTTCCGAACTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCATATGCCACAACGTTTaGTGCACATTAACTGACCCA +
Preference number: 3 (lower is better)
Translates to: LCLISLPAPSLATLHGCLICHNV*CTLTDP
Trigger: TGGGTCAGTTAATGTGCACAAAACGTTGTGGCATAT...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp GACTGTTCTGTTCTCCTAATTCCAACAGAAAGCACATaGACCCTTGTAACAACTGCAGGGGCTGAGTGGGGC +
Preference number: 3 (lower is better)
Translates to: DCSVLLIPTEST*TLVTTAGAEWG
Trigger: GCCCCACTCAGCCCCTGCAGTTGTTACAAGGGTTCATGTGCTTTCTGTTGGAATTAGGAGAACAGAACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 72 bp GCCCTGAAATGCTGCACCCAGGTAGACACCCCAGAATaGCAACTGAGGCAAGTCAAGTCATTCTTCATTCAT +
Preference number: 3 (lower is better)
Translates to: ALKCCTQVDTPE*QLRQVKSFFIH
Trigger: ATGAATGAAGAATGACTTGACTTGCCTCAGTTGGCATTCTGGGGTGTCTACCTGGGTGCAGCATTTCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 72 bp TTATCCACCAAGTGTGTTGAGGCAGAAGAAAGGGTCTaGTACCCCTGGCAAACAGGCTGCTGCCATTGTTTT +
Preference number: 3 (lower is better)
Translates to: LSTKCVEAEERV*YPWQTGCCHCF
Trigger: AAAACAATGGCAGCAGCCTGTTTGCCAGGGGTAGCAGACCCTTTCTTCTGCCTCAACACACTTGGTGGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR CCA 72 bp TACTTCATCATGCTGGCCGTAATGTCCTACAACACCTaGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: YFIMLAVMSYNT*IFLGVVLGSAV
Trigger: CACAGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGCCAGCATGATGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCGGCCCAGGCATGGTCTaGTGTCTTAAGACAGCTGCT +
Preference number: 3 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPGPGMV*CLKTAA
Trigger: AGCAGCTGTCTTAAGACACAAGACCATGCCTGGGCC...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp CATCATTCCCACACCTCCATTAAGCATCACAAGGAGTaGGCAGCTGTTCCCAGTGACAGTATGCCTTATCCA +
Preference number: 3 (lower is better)
Translates to: HHSHTSIKHHKE*AAVPSDSMPYP
Trigger: TGGATAAGGCATACTGTCACTGGGAACAGCTGCTCACTCCTTGTGATGCTTAATGGAGGTGTGGGAATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR CCA 72 bp TCTCAAAGTGAAGAATCCCTCAGGTGCCATGAACAATaGAAAGAAGGGACCCTCTCACCTTCTTTGCATGGC +
Preference number: 3 (lower is better)
Translates to: SQSEESLRCHEQ*KEGTLSPSLHG
Trigger: GCCATGCAAAGAAGGTGAGAGGGTCCCTTCTTTCCATTGTTCATGGCACCTGAGGGATTCTTCACTTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp AAAAGTAACTGTCACACGGACTTTAAGCACCTGTGTTaGCACAATTACTCAGCATCTTCTCTCCCTGCGGGC +
Preference number: 3 (lower is better)
Translates to: KSNCHTDFKHLC*HNYSASSLPAG
Trigger: GCCCGCAGGGAGAGAAGATGCTGAGTAATTGTGCCAACACAGGTGCTTAAAGTCCGTGTGACAGTTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCCCTAGATATGTAACTTaGGGCAAATTACTTTACCTC +
Preference number: 3 (lower is better)
Translates to: LCLISLPAPSLATLHGCLPRYVT*GKLLYL
Trigger: GAGGTAAAGTAATTTGCCCAAAGTTACATATCTAGG...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTCCTAGATATGTAACTTaGGGCAAATTACTTTACCTC +
Preference number: 3 (lower is better)
Translates to: DAGHGTWTPSALLLCALSPRYVT*GKLLYL
Trigger: GAGGTAAAGTAATTTGCCCAAAGTTACATATCTAGG...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp CAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTaGTATCTACTCCCAGCTTCCTCATTACCAGCTCAT +
Preference number: 3 (lower is better)
Translates to: QSGHVTQQLSTP*YLLPASSLPAH
Trigger: ATGAGCTGGTAATGAGGAAGCTGGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp CTACCCTTAGATTCCCAAAAGAGCACAGACAGCCCTTaGAACCAAACTCAATTTTTCTCCAAGGGCTTGGGT +
Preference number: 3 (lower is better)
Translates to: LPLDSQKSTDSP*NQTQFFSKGLG
Trigger: ACCCAAGCCCTTGGAGAAAAATTGAGTTTGGTTCCAAGGGCTGTCTGTGCTCTTTTGGGAATCTAAGGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp AACTTACTGAAGCTAGAGATGGGTGAGATCTGGGTTTaGCAGTTGGTAAGGACTGCAGCAGGAGAGTTATCT +
Preference number: 3 (lower is better)
Translates to: NLLKLEMGEIWV*QLVRTAAGELS
Trigger: AGATAACTCTCCTGCTGCAGTCCTTACCAACTGCCAAACCCAGATCTCACCCATCTCTAGCTTCAGTAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR-3UTR CAA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGTTGCAGAGAAACCTTaGCACCAGTTTCCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: IELVVLFISLSEDRVHPSVAEKP*HQFPGS
Trigger: AGACCCAGGAAACTGGTGCAAAGGTTTCTCTGCAAC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGAAACAGCACCGCCTTTaGTTAAGCAACAAAGAAATA +
Preference number: 3 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVKQHRL*LSNKEI
Trigger: TATTTCTTTGTTGCTTAACAAAAGGCGGTGCTGTTT...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR-3UTR CAA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTAAACAGCACCGCCTTTaGTTAAGCAACAAAGAAATA +
Preference number: 3 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAKQHRL*LSNKEI
Trigger: TATTTCTTTGTTGCTTAACAAAAGGCGGTGCTGTTT...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp CTGAGACCTATTTCCCTTTCTTGGGGAGAGAATAAGTaGCAGCTGATTAAAGGCAGAGACACAGGACTGCTT +
Preference number: 3 (lower is better)
Translates to: LRPISLSWGENK*QLIKGRDTGLL
Trigger: AAGCAGTCCTGTGTCTCTGCCTTTAATCAGCTGTCACTTATTCTCTCCCCAAGAAAGGGAAATAGGTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp AGAAAGCACATGAACCCTTGTAACAACTGCAGGGGCTaGGTGGGGCTAATAGAACTGGTAGTACTCTTTATA +
Preference number: 3 (lower is better)
Translates to: RKHMNPCNNCRG*VGLIELVVLFI
Trigger: TATAAAGAGTACTACCAGTTCTATTAGCCCCACTCAGCCCCTGCAGTTGTTACAAGGGTTCATGTGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp CAGGGGAAACCAGTCACTAAAATCCTACCCAGAAACTaGAGAAAGTGTATCTTAGGTCACTACCCAGTCATC +
Preference number: 3 (lower is better)
Translates to: QGKPVTKILPRN*RKCILGHYPVI
Trigger: GATGACTGGGTAGTGACCTAAGATACACTTTCTTCAGTTTCTGGGTAGGATTTTAGTGACTGGTTTCCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR-3UTR CAA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCTTATCTAGGTGGTATTaGTGTCACTTTGGCCAGTCT +
Preference number: 3 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPLSRWY*CHFGQS
Trigger: AGACTGGCCAAAGTGACACAAATACCACCTAGATAA...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp GGAGTAAATATGCCACAACGTTTTGTGCACATTAACTaGCCCAGATCTGTAAGACTCCTACCCTTAGATTCC +
Preference number: 3 (lower is better)
Translates to: GVNMPQRFVHIN*PRSVRLLPLDS
Trigger: GGAATCTAAGGGTAGGAGTCTTACAGATCTGGGTCAGTTAATGTGCACAAAACGTTGTGGCATATTTACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR TCA 72 bp GCTAATAGAACTGGTAGTACTCTTTATAAGCCTGTCTaGGGACAGAGTCCATCCATCTGCTACAAAGACAAC +
Preference number: 3 (lower is better)
Translates to: ANRTGSTLYKPV*GQSPSICYKDN
Trigger: GTTGTCTTTGTAGCAGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTATTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR GCA 72 bp CTTTTGTTAAGCAACAAAGAAATAATTAGTTCTCACTaGCTCCCAGGTCCGCACACGGGAGACATATCCAAA +
Preference number: 3 (lower is better)
Translates to: LLLSNKEIISSH*LPGPHTGDISK
Trigger: TTTGGATATGTCTCCCGTGTGCGGACCTGGGAGGCAGTGAGAACTAATTATTTCTTTGTTGCTTAACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CCA 72 bp ATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTaGTTTAGAGATGAGAAAGTGGTAACCAAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: IFMTLERRLSFA*FRDEKVVTKEG
Trigger: CCCTTCCTTGGTTACCACTTTCTCATCTCTAAACCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR-3UTR CAA 90 bp CCAAATCTGCCAATTTCCAAGGATGCCTCTCCCCTGCTAGATTCTGAAGCTAATGGGCTCTACTTGTTCTaGCATTTAATCTTTATGACA +
Preference number: 3 (lower is better)
Translates to: PNLPISKDASPLLDSEANGLYLF*HLIFMT
Trigger: TGTCATAAAGATTAAATGCAAGAACAAGTAGAGCCC...ATTAGCTTCAGAATCTAGCAGGGGAGAGGCATCCTTGGAAATTGGCAGATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR-3UTR CAA 90 bp TTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTGGTTACAAACTCTGACTTaGGGGAACTGCTACTGTATG +
Preference number: 3 (lower is better)
Translates to: LFLHLIFMTLERRLSFAWLQTLT*GNCYCM
Trigger: CATACAGTAGCAGTTCCCCAAAGTCAGAGTTTGTAA...CCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR TCA 72 bp GGCAAGAACATAAAAACCACCTGTATCCTACTTTGCTaGGATAACTATTACTCTTGTGCTATTTATCTTTCC +
Preference number: 3 (lower is better)
Translates to: GKNIKTTCILLC*DNYYSCAIYLS
Trigger: GGAAAGATAAATAGCACAAGAGTAATAGTTATCTCAGCAAAGTAGGATACAGGTGGTTTTTATGTTCTTGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGCTGGATGGGCCGGATaGAGAGAGGGCTGGACGGAC +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGAGWAG*REGWTD
Trigger: GTCCGTCCAGCCCTCTCTTCATCCGGCCCATCCAGC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGCTTCCTCGACCACCTaGTCTGAGGGCACCATGGGG +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGASSTT*SEGTMG
Trigger: CCCCATGGTGCCCTCAGAGCAGGTGGTCGAGGAAGC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGGAGTCACCACAGGCTaGCCACCTCCTTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGGVTTG*PPPCRV
Trigger: CACTCTGCAAGGAGGTGGGCAGCCTGTGGTGACTCC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCGCTTCCTCGACCACCTaGTCTGAGGGCACCATGGGG +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFASSTT*SEGTMG
Trigger: CCCCATGGTGCCCTCAGAGCAGGTGGTCGAGGAAGC...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGATGGCCGTGGGTGTCTaGGAAGCTCTTCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGMAVGV*EALRGL
Trigger: GAGGCCACGAAGAGCTTCCCAGACACCCACGGCCAT...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGCTATTCAGGGGTGCTTaGGGCTGCCCAGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGLFRGA*GCPELA
Trigger: AGCCAGTTCTGGGCAGCCTCAAGCACCCCTGAATAG...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGACCTGCCTCTGTGCTTaGCAGCTCCTTGTGGGGACC +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEETCLCA*QLLVGT
Trigger: GGTCCCCACAAGGAGCTGTCAAGCACAGAGGCAGGT...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCTGGAACGCTGGGAATaGTGGCTGGGTCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFLERWE*WLGLRA
Trigger: AGCCCTCAGACCCAGCCATCATTCCCAGCGTTCCAG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGCAGGAGCAAGAGGATaGCTGGACTGGTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGAGARG*LDWSSQ
Trigger: CTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGGCCTCACATTCACCCTaGGAGACAGGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEASHSP*ETGWPR
Trigger: TCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGC...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGTGGTACTGCTGCAGGTaGTCATCCTTGGCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEWYCCR*SSLAEA
Trigger: GGCCTCCGCCAAGGATGAGCACCTGCAGCAGTACCA...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGACCTCCTGGTACTGCTaGAGGTGCTCATCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGTSWYC*RCSSLA
Trigger: CGCCAAGGATGAGCACCTGCAGCAGTACCAGGAGGT...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGCTGAAGCCAGCACTTaGTCCCTGGAGTTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGAEAST*SLEFGS
Trigger: GCTTCCGAACTCCAGGGAGCAAGTGCTGGCTTCAGC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCTGGAAGGGAAACAGTaGTGGCCTGGCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFLEGKQ*WPGQVS
Trigger: GGAGACCTGGCCAGGCCAGCACTGTTTCCCTTCCAG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGCTGAGAGAGCGGTGCTaGGTACAAAGGCCGAACGGG +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEELRERC*VQRPNG
Trigger: CCCGTTCGGCCTTTGTACCCAGCACCGCTCTCTCAG...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGACACAGACCTTTCCTaGTGGGTTGTCGGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGDTDLS*WVVGLS
Trigger: GCTAAGCCCGACAACCCATCAGGAAAGGTCTGTGTC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACCCCTATCTAGCAAATaGGGTGGCCACCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPPLSSK*GGHPPS
Trigger: GGAGGGTGGGTGGCCACCTCATTTGCTAGATAGGGG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCTACAGCAGGGCCGTCTaGCACAATGAGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFYSRAV*HNEVLG
Trigger: TCCCAGGACCTCATTGTGGCAGACGGCCCTGCTGTA...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGGAGTCACCACAGGCTaGCCACCTCCTTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPGVTTG*PPPCRV
Trigger: CACTCTGCAAGGAGGTGGGCAGCCTGTGGTGACTCC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCAAAGGCCGAACGGGCTaGAGCTGGGAGGTGACGGCA +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLKGRTG*SWEVTA
Trigger: TGCCGTCACCTCCCAGCTGCAGCCCGTTCGGCCTTT...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGTCTGAGAGCTTTGCCTaGACTTTGGTGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGSESFA*TLVSWP
Trigger: GGGCCAGCTCACCAAAGTGCAGGCAAAGCTCTCAGA...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGTAGGCATCTCTCTGTaGGCACACCTCCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGVGISL*AHLLVL
Trigger: CAGTACCAGGAGGTGTGCGCACAGAGAGATGCCTAC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGGCTGAAGCCAGCACTTaGTCCCTGGAGTTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEAEAST*SLEFGS
Trigger: GCTTCCGAACTCCAGGGAGCAAGTGCTGGCTTCAGC...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCCCCAGCCTCACCTGTaGTTAATAAGCCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFPQPHL*LISLPA
Trigger: AGCGGGCAGGCTTATTAAGCACAGGTGAGGCTGGGG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGGGAATCCAGCTGTGGTaGAAGGATGGGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEGIQLW*KDGQHG
Trigger: CCCATGCTGCCCATCCTTCCACCACAGCTGGATTCC...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTGAGGCTGACTGCTCCTaGGAAGGTCTTCGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSEADCS*EGLRGR
Trigger: GCGGCCACGAAGACCTTCCCAGGAGCAGTCAGCCTC...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCTTGACAGCTCCTTGTaGGGACCGGTGGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFLDSSL*GPVELV
Trigger: CACTAGCTCCACCGGTCCCCACAAGGAGCTGTCAAG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGTACAGGCAGTGGGTATaGGAAAGGGGCAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGYRQWV*ERGRSL
Trigger: GAGGCTTCTGCCCCTTTCCCATACCCACTGCCTGTA...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGCACAGGTACAGGCAGTaGGTATGGGAAAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGHRYRQ*VWERGR
Trigger: TCTGCCCCTTTCCCATACCCACTGCCTGTACCTGTG...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGTGGCCAGCAGCTGCCTaGTCCAGTCCAAAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEWPAAA*SSPKSE
Trigger: CTCACTTTTTGGACTGGATCAGGCAGCTGCTGGCCA...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGCCTATTACCCCTTCTaGGCCAACAGCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPAYYPF*ANSTGW
Trigger: CCAGCCTGTGCTGTTGGCTCAGAAGGGGTAATAGGC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAGCTGGATGGGCCGGATaGAGAGAGGGCTGGACGGAC +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEAGWAG*REGWTD
Trigger: GTCCGTCCAGCCCTCTCTTCATCCGGCCCATCCAGC...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGATGGAAATGGGGAGGCTaGGAGAGCGGTGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRWKWGG*ESGAGY
Trigger: GTACCCAGCACCGCTCTCTCAGCCTCCCCATTTCCA...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCTGGAAATGGGGAGGCTaGGAGAGCGGTGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRWKWGG*ESGAGY
Trigger: GTACCCAGCACCGCTCTCTCAGCCTCCCCATTTCCA...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGCCAGGGATGTCACCTTaGGTTCCAGTTGTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGPGMSP*VPVVSG
Trigger: ACCGGAAACAACTGGAACTCAAGGTGACATCCCTGG...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCTTCTTGACCTTCTCTaGGGGGTCAGATGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFLLDLL*GVRCSS
Trigger: GCTGCTGCATCTGACCCCTCAGAGAAGGTCAAGAAG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACTATTCAGGGGTGCTTaGGGCTGCCCAGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPLFRGA*GCPELA
Trigger: AGCCAGTTCTGGGCAGCCTCAAGCACCCCTGAATAG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACTCGACCACCTGCTCTaGGGGCACCATGGGGGACTC +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELELDHLL*GHHGGL
Trigger: GAGTCCCCCATGGTGCCCTCAGAGCAGGTGGTCGAG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCCCCTCCTCGGGGTCTaGAGTCAGGGACAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRPLLGV*SQGQSC
Trigger: ACAAGACTGTCCCTGACTTCAGACCCCGAGGAGGGG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCTGGAACGCTGGGAATaGTGGCTGGGTCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRLERWE*WLGLRA
Trigger: AGCCCTCAGACCCAGCCATCATTCCCAGCGTTCCAG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGGGCCAACCCACCCTCTaGGCCCAAATATTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEGQPTL*AQILFP
Trigger: TGGGAACAATATTTGGGCTCAGAGGGTGGGTTGGCC...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGATCATGCCCCAGGGATaGGCTAGGACTACAGTGGTG +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEIMPQG*ARTTVV
Trigger: CACCACTGTAGTCCTAGCTCATCCCTGGGGCATGAT...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCCTGCAGGAAGAAGATaGTCTGATGGCCGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFPAGRR*SDGRGC
Trigger: ACACCCACGGCCATCAGATCATCTTCTTCCTGCAGG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCGGGTGGCAGGGTTACTaGGCCCATGACAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFGWQGY*AHDNAS
Trigger: AGAAGCATTGTCATGGGCTCAGTAACCCTGCCACCC...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTCCCCTATCTAGCAAATaGGGTGGCCACCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGPLSSK*GGHPPS
Trigger: GGAGGGTGGGTGGCCACCTCATTTGCTAGATAGGGG...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCGGCCAAAGCACTCTGTaGACAGCCAGCCACTTGAGA +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFGQSTL*TASHLR
Trigger: TCTCAAGTGGCTGGCTGTTCACAGAGTGCTTTGGCC...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGATGGAGTGGATTCCATaGACAGGTGGAGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGMEWIP*TGGGAG
Trigger: TCCAGCACCTCCACCTGTTCATGGAATCCACTCCAT...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGTCTGAGAGCTTTGCCTaGACTTTGGTGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEESESFA*TLVSWP
Trigger: GGGCCAGCTCACCAAAGTGCAGGCAAAGCTCTCAGA...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCACACCTCCTGGTACTaGTGCAGGTGCTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFHTSWY*CRCSSL
Trigger: CAAGGATGAGCACCTGCAGCAGTACCAGGAGGTGTG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATCTGAGGGCTGCTCCTaGAACTGTGGAACCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPSEGCS*NCGTCL
Trigger: GAGGCAGGTTCCACAGTTGCAGGAGCAGCCCTCAGA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTGCTGGGTCTGAGGGCTaGTCCTGCAACTGTGGAACC +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSAGSEG*SCNCGT
Trigger: GGTTCCACAGTTGCAGGAGCAGCCCTCAGACCCAGC...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTGTGACAGTCAGGCTGTaGTGGCCAAGAGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGVTVRL*WPRAQA
Trigger: AGCCTGGGCTCTTGGCCAGCACAGCCTGACTGTCAC...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGAACCCAGCCCTGAAATaGTGCACCCAGGTAGACACC +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEENPALK*CTQVDT
Trigger: GGTGTCTACCTGGGTGCAGCATTTCAGGGCTGGGTT...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGTCACGACAGATTTGTaGAGCCTGCTGGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPVTTDL*SLLGEW
Trigger: CCACTCCCCCAGCAGGCTGCACAAATCTGTCGTGAC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGATGGGCAGCATGGGCTaGCCCATTTTAGCCATCCGA +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEMGSMG*PILAIR
Trigger: TCGGATGGCTAAAATGGGCCAGCCCATGCTGCCCAT...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGCAGCAGAAGGTGCCTaGAGCCCAGTAACAGATGGC +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPAAEGA*SPVTDG
Trigger: GCCATCTGTTACTGGGCTCCAGGCACCTTCTGCTGC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACGAACGGGCTGCAGCTaGGAGGTGACGGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELERTGCS*EVTADA
Trigger: GGCATCTGCCGTCACCTCCCAGCTGCAGCCCGTTCG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGCGAACGGGCTGCAGCTaGGAGGTGACGGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVRTGCS*EVTADA
Trigger: GGCATCTGCCGTCACCTCCCAGCTGCAGCCCGTTCG...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGACACCATGGGGGACTCTaGCCTCTCCCTATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRHHGGL*PLPIQG
Trigger: CCCCTGAATAGGGAGAGGCCAGAGTCCCCCATGGTG...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTGCTCTGAGGGCACCATaGGGGACTCTGGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAALRAP*GTLASP
Trigger: GGGAGAGGCCAGAGTCCCCCATGGTGCCCTCAGAGC...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCCTCTTCACCAGGTCTaGCGGGGGTGGGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQPLHQV*RGWGSE
Trigger: TTCTGAGCCCCACCCCCGCCAGACCTGGTGAAGAGG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTGCAGGGCATGGAACCTaGACACCCTCAGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSAGHGT*TPSALL
Trigger: CAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGC...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTGAGGCTGGAGGGACATaGAGCCCCCTCTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSEAGGT*SPLFQT
Trigger: TGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTC...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGTCCTTGGTGTGGTCTTaGGCTCTGCTGTGGGCTACT +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEESLVWS*ALLWAT
Trigger: AGTAGCCCACAGCAGAGCCCAAGACCACACCAAGGA...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGCCGGGCTTCAGTCATaGGAAATGAAGCCATATCAC +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGAGLQS*EMKPYH
Trigger: GTGATATGGCTTCATTTCTCATGACTGAAGCCCGGC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCTGGGCTGGCAGCAAGTaGCTCCTCACACTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLWAGSK*LLTLRV
Trigger: GACTCTGAGTGTGAGGAGTCACTTGCTGCCAGCCCA...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGACCTGCCTCTGTGCTTaGCAGCTCCTTGTGGGGACC +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGETCLCA*QLLVGT
Trigger: GGTCCCCACAAGGAGCTGTCAAGCACAGAGGCAGGT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCTTCTTTAGGGAACAGTaGTCTTCAGGTGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFFFREQ*SSGAGP
Trigger: GGGGCCTGCACCTGAAGATCACTGTTCCCTAAAGAA...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGGCCAAAGCACTCTGTaGACAGCCAGCCACTTGAGA +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPGQSTL*TASHLR
Trigger: TCTCAAGTGGCTGGCTGTTCACAGAGTGCTTTGGCC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTCAACTCTGCCTCCTTTaGCAGGCATGGCCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGQLCLL*QAWPFR
Trigger: CCGAAAGGGCCATGCCTGTCAAAGGAGGCAGAGTTG...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGATGGAGTGGATTCCATaGACAGGTGGAGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEMEWIP*TGGGAG
Trigger: TCCAGCACCTCCACCTGTTCATGGAATCCACTCCAT...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTCCCCGCACCGAACATTaGGTTGGCTTTCACCGGGTT +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSPRTEH*VGFHRV
Trigger: AACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGG...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGATGGGAGACGGAGCTaGAGAATCGCGGGAACTAAC +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPDGRRS*RIAGTN
Trigger: GTTAGTTCCCGCGATTCTGCAGCTCCGTCTCCCATC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGGAGGTGACGGCAGATaGCTGGGGATAAGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQGGDGR*LGISVG
Trigger: GCCTACGCTTATCCCCAGGCATCTGCCGTCACCTCC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGGGAGGTGACGGCAGATaGCTGGGGATAAGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEGGDGR*LGISVG
Trigger: GCCTACGCTTATCCCCAGGCATCTGCCGTCACCTCC...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCAGCTGCTCTGCAGCTaGTTGGTCTGTGGACACTCG +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRQLLCS*LVCGHS
Trigger: CGAGTGTCCACAGACCAAGCAGCTGCAGAGCAGCTG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCACCTCCTGGTACTGCTaGAGGTGCTCATCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLTSWYC*RCSSLA
Trigger: CGCCAAGGATGAGCACCTGCAGCAGTACCAGGAGGT...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAGTTGTCGGGCTTAGCTaGCATTGGGCTGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRVVGLS*HWAGSK
Trigger: CTTGCTGCCAGCCCAATGGCAGCTAAGCCCGACAAC...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCGTTGTCGGGCTTAGCTaGCATTGGGCTGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRVVGLS*HWAGSK
Trigger: CTTGCTGCCAGCCCAATGGCAGCTAAGCCCGACAAC...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCAGCCCAGGTCTTGTTaGCGGGGCACAGTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQQPRSC*RGTVEH
Trigger: GTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGAGGGAACTGGAAAGCTaGCTGGTGTCTCAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEERELES*LVSQEA
Trigger: GGCTTCTTGAGACACCAGGCAGCTTTCCAGTTCCCT...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTCCAGCCCTGAAATGCTaGACCCAGGTAGACACCCCA +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGPALKC*TQVDTP
Trigger: TGGGGTGTCTACCTGGGTGCAGCATTTCAGGGCTGG...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTCCAGCCCTGAAATGCTaGACCCAGGTAGACACCCCA +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSPALKC*TQVDTP
Trigger: TGGGGTGTCTACCTGGGTGCAGCATTTCAGGGCTGG...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGACCCCAGCCTCACCTGTaGTTAATAAGCCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRPQPHL*LISLPA
Trigger: AGCGGGCAGGCTTATTAAGCACAGGTGAGGCTGGGG...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGTTAGGGTCCCTGTTCTaGCCTCTGTCCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQLGSLF*PLSSPS
Trigger: GCTGGGGCTGGACAGAGGGCAGAACAGGGACCCTAA...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTGCCACAATGAGGTCCTaGGAGAGCACTGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSATMRS*ESTASR
Trigger: CCTGGATGCAGTGCTCTCCCAGGACCTCATTGTGGC...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAGGAATCCAGCTGTGGTaGAAGGATGGGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRGIQLW*KDGQHG
Trigger: CCCATGCTGCCCATCCTTCCACCACAGCTGGATTCC...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTTGTGCGCACACCTCCTaGTACTGCTGCAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSCAHTS*YCCRCS
Trigger: TGAGCACCTGCAGCAGTACCAGGAGGTGTGCGCACA...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGCTGTGATTTGGGCCTaGAGGGCTAAACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGAVIWA*RAKHFS
Trigger: GGAAAAGTGTTTAGCCCTCCAGGCCCAAATCACAGC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGGAGGCTGACTGCTCCTaGGAAGGTCTTCGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVEADCS*EGLRGR
Trigger: GCGGCCACGAAGACCTTCCCAGGAGCAGTCAGCCTC...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACCTCTTCACCAGGTCTaGCGGGGGTGGGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEPLHQV*RGWGSE
Trigger: TTCTGAGCCCCACCCCCGCCAGACCTGGTGAAGAGG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCGAGCAAGAGGATGACTaGACTGGTCCTCACAGAACC +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFEQEDD*TGPHRT
Trigger: GGTTCTGTGAGGACCAGTCCAGTCATCCTCTTGCTC...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCAAGAGCCCAGGCTCTaGAATCAGATGGCCAGGATT +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFQEPRL*NQMARI
Trigger: AATCCTGGCCATCTGATTCCAGAGCCTGGGCTCTTG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTGAAGGGAAACAGTGCTaGCCTGGCCAGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGEGKQC*PGQVST
Trigger: TGTGGAGACCTGGCCAGGCCAGCACTGTTTCCCTTC...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTTTGCGGGGAGGAAGCTaGGTATTCCCAGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSLRGGS*VFPESQ
Trigger: CTGGGACTCTGGGAATACCCAGCTTCCTCCCCGCAA...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446284.6
CDS-3UTR TCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATGGCCGTCTGCCACAATaGGGTCCTGGGAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYGRLPQ*GPGRAL
Trigger: CAGTGCTCTCCCAGGACCTCATTGTGGCAGACGGCC...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGCTGGCTCCCCTGATTTaGAAGGTATTGATGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEELAPLI*KVLMWV
Trigger: CACCCACATCAATACCTTTCAAATCAGGGGAGCCAG...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTGGGACTTTTTCCAGTTTCGAGACTCCCCATGTTAATGAGGCATAGCCTATCCGCTGGATGGGCCGGATaGAGAGAGGGCTGGACGGAC +
Preference number: 4 (lower is better)
Translates to: VGLFPVSRLPMLMRHSLSAGWAG*REGWTD
Trigger: GTCCGTCCAGCCCTCTCTTCATCCGGCCCATCCAGC...GGATAGGCTATGCCTCATTAACATGGGGAGTCTCGAAACTGGAAAAAGTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCTTCTTGACCTTCTCTaGGGGGTCAGATGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRLLDLL*GVRCSS
Trigger: GCTGCTGCATCTGACCCCTCAGAGAAGGTCAAGAAG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACTGGTGCTACTTCCCTaGCACAGACCTTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPLVLLP*HRPFLM
Trigger: CATCAGGAAAGGTCTGTGTCAGGGAAGTAGCACCAG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCAGGACTCTTACAGGTaGCTGGCTTGGAGGGGAACC +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQQDSYR*LAWRGT
Trigger: GGTTCCCCTCCAAGCCAGTCACCTGTAAGAGTCCTG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCTTGCCGGGGCACAGTTaGGCACTGGATTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLLPGHS*ALDSGR
Trigger: TCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAA...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGCAGGAGCAAGAGGATaGCTGGACTGGTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQAGARG*LDWSSQ
Trigger: CTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGTGGGCAGGTACTGACTaGAGATGCAATCCAACCAAA +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGWAGTD*RCNPTK
Trigger: TTTGGTTGGATTGCATCTTCAGTCAGTACCTGCCCA...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCAGGAAGAAGATGATCTaGTGGCCGTGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRRKKMI*WPWVSG
Trigger: CCCAGACACCCACGGCCATCAGATCATCTTCTTCCT...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAAGGAAGAAGATGATCTaGTGGCCGTGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRRKKMI*WPWVSG
Trigger: CCCAGACACCCACGGCCATCAGATCATCTTCTTCCT...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTCCTGCAGGAAGAAGATaGTCTGATGGCCGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGPAGRR*SDGRGC
Trigger: ACACCCACGGCCATCAGATCATCTTCTTCCTGCAGG...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTGGGTGGCAGGGTTACTaGGCCCATGACAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGGWQGY*AHDNAS
Trigger: AGAAGCATTGTCATGGGCTCAGTAACCCTGCCACCC...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTGAACAGCCAGCCACTTaGGAGGCTCAGAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGEQPAT*EAQKAF
Trigger: GAAAGCCTTCTGAGCCTCTCAAGTGGCTGGCTGTTC...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTGGTACTGCTGCAGGTaGTCATCCTTGGCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAWYCCR*SSLAEA
Trigger: GGCCTCCGCCAAGGATGAGCACCTGCAGCAGTACCA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTCACACCTCCTGGTACTaGTGCAGGTGCTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSHTSWY*CRCSSL
Trigger: CAAGGATGAGCACCTGCAGCAGTACCAGGAGGTGTG...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTCTGAGGGCTGCTCCTaGAACTGTGGAACCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGESEGCS*NCGTCL
Trigger: GAGGCAGGTTCCACAGTTGCAGGAGCAGCCCTCAGA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAGCTGGGTCTGAGGGCTaGTCCTGCAACTGTGGAACC +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEAGSEG*SCNCGT
Trigger: GGTTCCACAGTTGCAGGAGCAGCCCTCAGACCCAGC...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTCTCCTCCTCAGGCTGTaGTTTGGGCCTCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGLLLRL*FGPQSF
Trigger: AAAGCTCTGAGGCCCAAAGCACAGCCTGAGGAGGAG...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCATAATTAGTTCTCACTaGCTCCCAGGTCCGCACACG +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFIISSH*LPGPHT
Trigger: CGTGTGCGGACCTGGGAGGCAGTGAGAACTAATTAT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTAACCCAGCCCTGAAATaGTGCACCCAGGTAGACACC +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSNPALK*CTQVDT
Trigger: GGTGTCTACCTGGGTGCAGCATTTCAGGGCTGGGTT...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGCTACAAAGACAACTCTaGTCAGGGAAACCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEELQRQL*SGKPSP
Trigger: AGGGCTGGGTTTCCCTGAGCAGAGTTGTCTTTGTAG...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGCACCCTCAGCTCTCCTaGTTTGTGCCTTATCTACAG +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEHPQLS*FVPYLQ
Trigger: CTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTG...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGGAGTTCGGAAGCCATTaGAGCAACCTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEEFGSH*SNLPSQ
Trigger: CTGAGAAGGAAGGTTGCTGCAATGGCTTCCGAACTC...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTTGTGGTCTTGGGCTCTaGTGTGGGCTACTACCTAGC +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGCGLGL*CGLLPS
Trigger: GCTAGGTAGTAGCCCACAGCAGAGCCCAAGACCACA...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTGACAGACGGGGACTCTaGAGGCTCAGATTCATTCCC +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSDRRGL*RLRFIP
Trigger: GGGAATGAATCTGAGCCTGCAGAGTCCCCGTCTGTC...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCCCTTTCGGTGTTGGTaGTCCTGCTTCTGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRPFRCW*SCFWLY
Trigger: GTACAGCCAGAAGCAGGAGCACCAACACCGAAAGGG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCTGGAAGGGAAACAGTaGTGGCCTGGCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSALEGKQ*WPGQVS
Trigger: GGAGACCTGGCCAGGCCAGCACTGTTTCCCTTCCAG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATTGCGACCAGTATTGTaGGAGTGCTCATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPLRPVL*ECSWWL
Trigger: CAGCCACCATGAGCACTCCCACAATACTGGTCGCAA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGATGTCAGCACCAGGGATaGGAGACGGAGCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRCQHQG*ETELQN
Trigger: ATTCTGCAGCTCCGTCTCCCATCCCTGGTGCTGACA...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGATTGGAATCCAGCTGTaGTGGAAGGATGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEIGIQL*WKDGQH
Trigger: ATGCTGCCCATCCTTCCACCACAGCTGGATTCCAAT...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTGTGCGCACACCTCCTaGTACTGCTGCAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGECAHTS*YCCRCS
Trigger: TGAGCACCTGCAGCAGTACCAGGAGGTGTGCGCACA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACTGGGAAGGTCTTCGTaGCCGCTCTTCTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPLGRSS*PLFCFF
Trigger: GAAAAAGCAGAAGAGCGGCCACGAAGACCTTCCCAG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTCACACTCAGAGTCCATaGATACAGGGCCTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSHTQSP*IQGLGA
Trigger: AGCCCCTAGGCCCTGTATCCATGGACTCTGAGTGTG...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTCATCCCCAGAGAGACTaGAACGCTGGGAATGATGGC +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSHPQRD*NAGNDG
Trigger: GCCATCATTCCCAGCGTTCCAGTCTCTCTGGGGATG...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTATGGCCGTGGGTGTCTaGGAAGCTCTTCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAMAVGV*EALRGL
Trigger: GAGGCCACGAAGAGCTTCCCAGACACCCACGGCCAT...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCCAGCACTTGCTCCCTaGAGTTCGGAAGCCATTGCA +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRPALAP*SSEAIA
Trigger: TGCAATGGCTTCCGAACTCCAGGGAGCAAGTGCTGG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGATCCTTGGTGTGGTCTTaGGCTCTGCTGTGGGCTACT +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRSLVWS*ALLWAT
Trigger: AGTAGCCCACAGCAGAGCCCAAGACCACACCAAGGA...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCATGTATCCCACTTGGTaGGAGGAGGATGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFMYPTW*EEDDKL
Trigger: GAGCTTGTCATCCTCCTCCCACCAAGTGGGATACAT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGGCAATGTATCCCACTTaGTGGGAGGAGGATGACAAG +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEAMYPT*WEEDDK
Trigger: CTTGTCATCCTCCTCCCACCAAGTGGGATACATTGC...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCACAGGTACAGGCAGTaGGTATGGGAAAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRHRYRQ*VWERGR
Trigger: TCTGCCCCTTTCCCATACCCACTGCCTGTACCTGTG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAGAAACAGTGCTGGCCTaGCCAGGTCTCCACAACTCT +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRETVLA*PGLHNS
Trigger: AGAGTTGTGGAGACCTGGCCAGGCCAGCACTGTTTC...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTTGGGGTAATGGTACGTaGCTTCTTCACCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSWGNGT*LLHPQP
Trigger: GGGCTGAGGGTGAAGAAGCCACGTACCATTACCCCA...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 72 bp ACTCTGCCTCCTTTGACAGGCATGGCCCTTTCGGTGTaGGTGCTCCTGCTTCTGGCTGTACTGTATGAAGGC +
Preference number: 4 (lower is better)
Translates to: TLPPLTGMALSV*VLLLLAVLYEG
Trigger: GCCTTCATACAGTACAGCCAGAAGCAGGAGCACCAACACCGAAAGGGCCATGCCTGTCAAAGGAGGCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGATCCAGTCCAAAAAGTaGGGCCAATCTGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEIQSKK*GQSGTA
Trigger: GGCGGTGCCAGATTGGCCTCACTTTTTGGACTGGAT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCTGCACACCTGCTTATTaGACTCCACAGCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFCTPAY*TPQQPF
Trigger: AAAAGGCTGCTGTGGAGTTCAATAAGCAGGTGTGCA...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCATCGAGTCCGTTGCTTaGGTCCAGCCTATTACCCCT +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLIESVA*VQPITP
Trigger: AGGGGTAATAGGCTGGACTCAAGCAACGGACTCGAT...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACTGGCTCCCCTGATTTaGAAGGTATTGATGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPLAPLI*KVLMWV
Trigger: CACCCACATCAATACCTTTCAAATCAGGGGAGCCAG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCATTTTCAGCTGCAGATaGGAGACCTGTGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRIFSCR*ETCAVA
Trigger: GGCCACTGCACAGGTCTCTCATCTGCAGCTGAAAAT...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACTCGACCACCTGCTCTaGGGGCACCATGGGGGACTC +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLLDHLL*GHHGGL
Trigger: GAGTCCCCCATGGTGCCCTCAGAGCAGGTGGTCGAG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCCTGGTGCTACTTCCCTaGCACAGACCTTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLLVLLP*HRPFLM
Trigger: CATCAGGAAAGGTCTGTGTCAGGGAAGTAGCACCAG...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTAATGATGGCTGGGTCTaGGGGCTGCTCCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSANDGWV*GLLLQL
Trigger: CAGTTGCAGGAGCAGCCCTCAGACCCAGCCATCATT...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAAATGATGGCTGGGTCTaGGGGCTGCTCCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELENDGWV*GLLLQL
Trigger: CAGTTGCAGGAGCAGCCCTCAGACCCAGCCATCATT...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCTATAGGCCAGGCTGTTaGCTGCACTGGGATTTAGAT +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFYRPGC*LHWDLD
Trigger: ATCTAAATCCCAGTGCAGTCAACAGCCTGGCCTATA...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACCCCAGAATGCCAACTaGGGCAAGTCAAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPPQNAN*GKSSHS
Trigger: AGAATGACTTGACTTGCCTCAGTTGGCATTCTGGGG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAAACAACTGCAGGGGCTaGGTGGGGCTAATAGAACTG +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRNNCRG*VGLIEL
Trigger: CAGTTCTATTAGCCCCACTCAGCCCCTGCAGTTGTT...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGATGGCAGAAACTGCTaGGACCTATTTCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGDGRNC*DLFPFL
Trigger: AAGAAAGGGAAATAGGTCTCAGCAGTTTCTGCCATC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGACTGGAAACTTTGAGCTaGAGCCAGCACTTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRLETLS*SQHLLP
Trigger: AGGGAGCAAGTGCTGGCTTCAGCTCAAAGTTTCCAG...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGATTCTTTAGGGAACAGTaGTCTTCAGGTGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRFFREQ*SSGAGP
Trigger: GGGGCCTGCACCTGAAGATCACTGTTCCCTAAAGAA...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGAGAGCTCATGTCTCCTaGTGCCCAGGCCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGERAHVS*CPGQST
Trigger: AGTGCTTTGGCCTGGGCATCAGGAGACATGAGCTCT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCTCAACCAGGTACTGGTaGACCTGCCAACCTCCATCA +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRSTRYW*TCQPPS
Trigger: TGATGGAGGTTGGCAGGTTCACCAGTACCTGGTTGA...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACAACTCTGCCTCCTTTaGCAGGCATGGCCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEQLCLL*QAWPFR
Trigger: CCGAAAGGGCCATGCCTGTCAAAGGAGGCAGAGTTG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCCCCGCACCGAACATTaGGTTGGCTTTCACCGGGTT +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAPRTEH*VGFHRV
Trigger: AACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGTGCTGTTTTTGGTGTTaGCTGATTTCCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGCCFWC*LISCCC
Trigger: GCAGCAACAGGAAATCAGGCAACACCAAAAACAGCA...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTGTGGTTCCCCAGAACTaGAGCACCAAATTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGVVPQN*STKFAL
Trigger: CAGGGCAAATTTGGTGCTGCAGTTCTGGGGAACCAC...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGGTAGGCATCTCTCTGTaGGCACACCTCCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEVGISL*AHLLVL
Trigger: CAGTACCAGGAGGTGTGCGCACAGAGAGATGCCTAC...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGGCGGGCGTCCCTTCATaGTCACCTCGTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVAGVPS*SPRLHP
Trigger: AGGATGAAGACGAGGTGAGCATGAAGGGACGCCCGC...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCACCCAGGGTTGGCTGTaGAAAATCATGCTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFTQGWL*KIMLRE
Trigger: TTCCCTAAGCATGATTTTGCACAGCCAACCCTGGGT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTCTCACAGAACCATCATaGCCCAGGGATGAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGLTEPS*PRDELG
Trigger: TCCTAGCTCATCCCTGGGGCATGATGGTTCTGTGAG...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGACATATCCAAAGCCTaGAAGGATGATGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPDISKA*KDDARP
Trigger: TGGCCTGGCATCATCCTTGCAGGCTTTGGATATGTC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTGTGGTCTTGGGCTCTaGTGTGGGCTACTACCTAGC +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGECGLGL*CGLLPS
Trigger: GCTAGGTAGTAGCCCACAGCAGAGCCCAAGACCACA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTATCCAGGAGGGGATCTaGAGCTGTCCTGAAGCAATG +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGIQEGI*SCPEAM
Trigger: CATTGCTTCAGGACAGCTGCAGATCCCCTCCTGGAT...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGACAGACGGGGACTCTaGAGGCTCAGATTCATTCCC +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQDRRGL*RLRFIP
Trigger: GGGAATGAATCTGAGCCTGCAGAGTCCCCGTCTGTC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCCCTTTCGGTGTTGGTaGTCCTGCTTCTGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQPFRCW*SCFWLY
Trigger: GTACAGCCAGAAGCAGGAGCACCAACACCGAAAGGG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGGTCACGACAGATTTGTaGAGCCTGCTGGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVVTTDL*SLLGEW
Trigger: CCACTCCCCCAGCAGGCTGCACAAATCTGTCGTGAC...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCCAGATACAGCTGAGTaGGAATCGAGAGATGACACT +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFPDTAE*ESRDDT
Trigger: AGTGTCATCTCTCGATTCCCACTCAGCTGTATCTGG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCAGCTGCTTGGTCTGTaGACACTCGAGTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFQLLGL*TLESFS
Trigger: TGAAAAAGACTCGAGTGTCCACAGACCAAGCAGCTG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGTGCTCTGCAGCTGCTTaGTCTGTGGACACTCGAGTC +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQCSAAA*SVDTRV
Trigger: GACTCGAGTGTCCACAGACCAAGCAGCTGCAGAGCA...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGTCAACCCCAGACATCTaGGACTTGTTCTTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGSTPDI*DLFFSS
Trigger: ACTAGAGAAGAACAAGTCCCAGATGTCTGGGGTTGA...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTCTGGGAAGGTCTTCGTaGCCGCTCTTCTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGLGRSS*PLFCFF
Trigger: GAAAAAGCAGAAGAGCGGCCACGAAGACCTTCCCAG...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCACACTCAGAGTCCATaGATACAGGGCCTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQHTQSP*IQGLGA
Trigger: AGCCCCTAGGCCCTGTATCCATGGACTCTGAGTGTG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATCAGGGACAGTCTTGTaGAGCTTTCTTGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPSGTVL*SFLVVG
Trigger: GCCCACTACAAGAAAGCTCCACAAGACTGTCCCTGA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTATCTTTCTTGAGCTGTaGAGGCTGAGGCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSIFLEL*RLRLSW
Trigger: CCAGGAGAGCCTCAGCCTCCACAGCTCAAGAAAGAT...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTATCTTTCTTGAGCTGTaGAGGCTGAGGCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGIFLEL*RLRLSW
Trigger: CCAGGAGAGCCTCAGCCTCCACAGCTCAAGAAAGAT...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGCTGCTCCTGCAACTGTaGAACCTGCCTCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGELLLQL*NLPLCL
Trigger: CAAGCACAGAGGCAGGTTCCACAGTTGCAGGAGCAG...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCTGGGAAGCTCTTCGTaGCCTCAATGCCCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRLGSSS*PQCPPL
Trigger: TAAAGGAGGGCATTGAGGCCACGAAGAGCTTCCCAG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGATGTCCTACAACACCTaGATTTTCCTTGGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGMSYNT*IFLGVV
Trigger: GACCACACCAAGGAAAATCCAGGTGTTGTAGGACAT...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTGGCCCTTTCGGTGTTaGTGCTCCTGCTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAWPFRC*CSCFWL
Trigger: CAGCCAGAAGCAGGAGCACCAACACCGAAAGGGCCA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGTGCTGGGGGAGTGGGTaGGGTAATGGTACGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVCWGSG*GNGTWL
Trigger: AAGCCACGTACCATTACCCCACCCACTCCCCCAGCA...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGATTTGTGCAGCCTGCTaGGGGAGTGGGTGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEICAAC*GSGWGN
Trigger: ATTACCCCACCCACTCCCCCAGCAGGCTGCACAAAT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGATTTGTGCAGCCTGCTaGGGGAGTGGGTGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQICAAC*GSGWGN
Trigger: ATTACCCCACCCACTCCCCCAGCAGGCTGCACAAAT...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAATCCAGTCCAAAAAGTaGGGCCAATCTGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEIQSKK*GQSGTA
Trigger: GGCGGTGCCAGATTGGCCTCACTTTTTGGACTGGAT...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGTTTTTGGTGTTGCCTaGTTTCCTGTTGCTGCCGTT +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPVFGVA*FPVAAV
Trigger: AACGGCAGCAACAGGAAATCAGGCAACACCAAAAAC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCGGGAACTAACACTGTaGCCATCAGAGCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRRELTL*PSEPES
Trigger: AGATTCTGGCTCTGATGGTCACAGTGTTAGTTCCCG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGAGATCAACTTGGCTTTaGCTGCATCGGGACTTGTAT +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEERSTWL*LHRDLY
Trigger: ATACAAGTCCCGATGCAGTCAAAGCCAAGTTGATCT...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGCACATCTTCGATTTCTaGATCATTGGAATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGHIFDF*IIGIQL
Trigger: CAGCTGGATTCCAATGATTCAGAAATCGAAGATGTG...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACCAGTAACAGATGGCTaGGGTGCCTGTGAGGTCATC +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEPVTDG*GACEVI
Trigger: GATGACCTCACAGGCACCTCAGCCATCTGTTACTGG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGTTTTCTGTGGCTGTCTaGAGTGAGTTGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEFSVAV*SELFLF
Trigger: GAAGAGGAACAACTCACTTCAGACAGCCACAGAAAA...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTGACACAGACCTTTCCTaGTGGGTTGTCGGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSADTDLS*WVVGLS
Trigger: GCTAAGCCCGACAACCCATCAGGAAAGGTCTGTGTC...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAATTGCCGGGGCACAGTTaGGCACTGGATTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELELPGHS*ALDSGR
Trigger: TCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAA...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCCCCAGAATGCCAACTaGGGCAAGTCAAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRPQNAN*GKSSHS
Trigger: AGAATGACTTGACTTGCCTCAGTTGGCATTCTGGGG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGTGCCTTTGGAACACATaGAGATCATCTCGTCTATGG +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEECLWNT*RSSRLW
Trigger: CCATAGACGAGATGATCTTCATGTGTTCCAAAGGCA...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTGACCTCTTCTGTCTTTaGGGGACAGAGACCAAGCTA +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGDLFCL*GTETKL
Trigger: TAGCTTGGTCTCTGTCCCTCAAAGACAGAAGAGGTC...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCGACCTCTTCTGTCTTTaGGGGACAGAGACCAAGCTA +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRDLFCL*GTETKL
Trigger: TAGCTTGGTCTCTGTCCCTCAAAGACAGAAGAGGTC...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCCAGCTTTCTACTCCCTaGTATCTACTCCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLQLSTP*YLLPAS
Trigger: GGAAGCTGGGAGTAGATATCAGGGAGTAGAAAGCTG...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGACAGCTTTCTACTCCCTaGTATCTACTCCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRQLSTP*YLLPAS
Trigger: GGAAGCTGGGAGTAGATATCAGGGAGTAGAAAGCTG...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGGTGGCTTCTCTTCCTaGTCTCAAAGCCACACTCCA +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQGGFSS*SQSHTP
Trigger: TGGAGTGTGGCTTTGAGATCAGGAAGAGAAGCCACC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GAGACCAAGAGCTCTCATGTTCCTTTGAGTCTCGGTCACCTCAACTGTAAGAGGCCCCGCACCGAACATTaGGTTGGCTTTCACCGGGTT +
Preference number: 4 (lower is better)
Translates to: ETKSSHVPLSLGHLNCKRPRTEH*VGFHRV
Trigger: AACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGG...CCTCTTACAGTTGAGGTGACCGAGACTCAAAGGAACATGAGAGCTCTTGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGTGCCTGATTTCCTGTTaGTGCCGTTCCCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQCLISC*CRSLAF
Trigger: AAAGGCCAGGGAACGGCAGCAACAGGAAATCAGGCA...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCTGCTGTTTTTGGTGTTaGCTGATTTCCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFCCFWC*LISCCC
Trigger: GCAGCAACAGGAAATCAGGCAACACCAAAAACAGCA...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCCAGTATTGTGGGAGTaGTCATGGTGGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAPVLWE*SWWLVL
Trigger: CAGCACCAGCCACCATGAGCACTCCCACAATACTGG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGTCGATATGCATGGACTaGTGTTGCGACCAGTATTGT +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEESICMD*CCDQYC
Trigger: ACAATACTGGTCGCAACAGCAGTCCATGCATATCGA...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCCAGGATCGAGTCCGTTaGTTGAGTCCAGCCTATTAC +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLQDRVR*LSPAYY
Trigger: GTAATAGGCTGGACTCAAGCAACGGACTCGATCCTG...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCATTAAGCATCACAAGGAGTGAGCAGCTGTTCCCAGTGACAGTATGCCTTATCGGAGTCACCACAGGCTaGCCACCTCCTTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: PLSITRSEQLFPVTVCLIGVTTG*PPPCRV
Trigger: CACTCTGCAAGGAGGTGGGCAGCCTGTGGTGACTCC...GATAAGGCATACTGTCACTGGGAACAGCTGCTCACTCCTTGTGATGCTTAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAAGGCTTTCTGTCAGCTaGATCTGCAGCTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRRLSVS*ICSSVS
Trigger: GGAAACAGAGCTGCAGATGCAGCTGACAGAAAGCCT...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCTCCTCCTCAGGCTGTaGTTTGGGCCTCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSALLLRL*FGPQSF
Trigger: AAAGCTCTGAGGCCCAAAGCACAGCCTGAGGAGGAG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGTTGCAGAGAAACCTTTaGACCAGTTTCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEELQRNL*TSFLGL
Trigger: AAGACCCAGGAAACTGGTGCAAAGGTTTCTCTGCAA...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCATAATTAGTTCTCACTaGCTCCCAGGTCCGCACACG +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLIISSH*LPGPHT
Trigger: CGTGTGCGGACCTGGGAGGCAGTGAGAACTAATTAT...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGCATTCCCCCATGTTTaGAGGGAACTGGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQAFPHV*RELESC
Trigger: GCAGCTTTCCAGTTCCCTGCAAACATGGGGGAATGC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCGGTGTTGGTGCTCCTaGTTCTGGCTGTACTGTATG +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQRCWCS*FWLYCM
Trigger: CATACAGTACAGCCAGAAGCAGGAGCACCAACACCG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GAGACCAAGAGCTCTCATGTTCCTTTGAGTCTCGGTCACCTCAACTGTAAGAGGCACCGAACATTGCGTTaGCTTTCACCGGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: ETKSSHVPLSLGHLNCKRHRTLR*LSPGCG
Trigger: CCCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTG...CCTCTTACAGTTGAGGTGACCGAGACTCAAAGGAACATGAGAGCTCTTGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTGGGAGTGCTCATGGTaGCTGGTGCTGTTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEWECSW*LVLFLV
Trigger: CACCAAAAACAGCACCAGCCACCATGAGCACTCCCA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGTGTATCGATATGCATaGACTGCTGTTGCGACCAGT +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPVYRYA*TAVATS
Trigger: ACTGGTCGCAACAGCAGTCCATGCATATCGATACAC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTACTCTCTGGCTGTGTaGTTCCCCAGAACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEYSLAV*FPRTAA
Trigger: TGCTGCAGTTCTGGGGAACCACACAGCCAGAGAGTA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGAATCCTATACTCTCTaGCTGTGTGGTTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPESYTL*LCGSPE
Trigger: TTCTGGGGAACCACACAGCCAGAGAGTATAGGATTC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGCCTAGCAACCGTAACTaGCTGTTGTTGACTGATATA +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGPSNRN*LLLTDI
Trigger: TATATCAGTCAACAACAGCCAGTTACGGTTGCTAGG...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATGCCACAATGAGGTCCTaGGAGAGCACTGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYATMRS*ESTASR
Trigger: CCTGGATGCAGTGCTCTCCCAGGACCTCATTGTGGC...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGGCCAACAGCACAGGCTaGAGGGACAATAAGCAATCG +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEANSTG*RDNKQS
Trigger: CGATTGCTTATTGTCCCTCCAGCCTGTGCTGTTGGC...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACCATCATTCCCACACCTCCATTAAGCATCACAAGGAGTGAGCAGCTGTTCCCAGGAATCCAGCTGTGGTaGAAGGATGGGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: TIIPTPPLSITRSEQLFPGIQLW*KDGQHG
Trigger: CCCATGCTGCCCATCCTTCCACCACAGCTGGATTCC...TGGGAACAGCTGCTCACTCCTTGTGATGCTTAATGGAGGTGTGGGAATGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTGCTCTGCAGCTGCTTaGTCTGTGGACACTCGAGTC +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSACSAAA*SVDTRV
Trigger: GACTCGAGTGTCCACAGACCAAGCAGCTGCAGAGCA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGACATTTTGCTTCCCACTaGGTCTGTAGCTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRHFASH*VCSSAC
Trigger: ACAGGCTGAGCTACAGACCCAGTGGGAAGCAAAATG...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAGCTGTGATTTGGGCCTaGAGGGCTAAACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRAVIWA*RAKHFS
Trigger: GGAAAAGTGTTTAGCCCTCCAGGCCCAAATCACAGC...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACCTCAGGCTGTGCTTTaGGCCTCAGAGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEPQAVL*ASELSE
Trigger: CTCTGAAAGCTCTGAGGCCCAAAGCACAGCCTGAGG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGCCTCAGGCTGTGCTTTaGGCCTCAGAGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVPQAVL*ASELSE
Trigger: CTCTGAAAGCTCTGAGGCCCAAAGCACAGCCTGAGG...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGATTTGCACCAGTTTCCTaGGTCTTCATCCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRFAPVS*VFIPAS
Trigger: ACTGGCTGGGATGAAGACCCAGGAAACTGGTGCAAA...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGGGCACAGTTGAGCACTaGATTCAGGTAGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVGTVEH*IQVEEG
Trigger: GCCCTCCTCTACCTGAATCCAGTGCTCAACTGTGCC...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTGGCACAGTTGAGCACTaGATTCAGGTAGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAGTVEH*IQVEEG
Trigger: GCCCTCCTCTACCTGAATCCAGTGCTCAACTGTGCC...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGAGCAAGAGGATGACTaGACTGGTCCTCACAGAACC +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQEQEDD*TGPHRT
Trigger: GGTTCTGTGAGGACCAGTCCAGTCATCCTCTTGCTC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGCAAGAGCCCAGGCTCTaGAATCAGATGGCCAGGATT +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEQEPRL*NQMARI
Trigger: AATCCTGGCCATCTGATTCCAGAGCCTGGGCTCTTG...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGCCAGCACTTGCTCCCTaGAGTTCGGAAGCCATTGCA +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVPALAP*SSEAIA
Trigger: TGCAATGGCTTCCGAACTCCAGGGAGCAAGTGCTGG...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAATACAGGCAGTGGGTATaGGAAAGGGGCAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEYRQWV*ERGRSL
Trigger: GAGGCTTCTGCCCCTTTCCCATACCCACTGCCTGTA...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTTTCACCCTCAGCCCCTaGATTTTTCAGGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSFTLSP*IFQVAS
Trigger: AGAAGCCACCTGAAAAATCCAGGGGCTGAGGGTGAA...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTGGGGTAATGGTACGTaGCTTCTTCACCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAWGNGT*LLHPQP
Trigger: GGGCTGAGGGTGAAGAAGCCACGTACCATTACCCCA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 72 bp CACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTaGCAGGGAACTGGAAAGCTGCCTGGTGTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: HTFRTDQGIPPC*QGTGKLPGVSR
Trigger: TCTTGAGACACCAGGCAGCTTTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp TGCAGCAGGAGAGTTATCTATGTATCCCAGGGGAAACCAGTCACTAAAATCCTAGGCCGTCTGCCACAATaGGGTCCTGGGAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: CSRRVIYVSQGKPVTKILGRLPQ*GPGRAL
Trigger: CAGTGCTCTCCCAGGACCTCATTGTGGCAGACGGCC...TAGGATTTTAGTGACTGGTTTCCCCTGGGATACATAGATAACTCTCCTGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGACCTTAGTCATGAGATaGTCCATTTTATCAGCCACT +
Preference number: 4 (lower is better)
Translates to: LVNLPTSISQQTIAETDGTLVMR*SILSAT
Trigger: AGTGGCTGATAAAATGGATCATCTCATGACTAAGGT...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATTTTCTGTGGCTGTCTaGAGTGAGTTGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPFSVAV*SELFLF
Trigger: GAAGAGGAACAACTCACTTCAGACAGCCACAGAAAA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGGTTTCTTGGAGCTCTaGGAGCTTTGCCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQGFLEL*ELCLHF
Trigger: AAAGTGCAGGCAAAGCTCTCAGAGCTCCAAGAAACC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGGGTTTCTTGGAGCTCTaGGAGCTTTGCCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEGFLEL*ELCLHF
Trigger: AAAGTGCAGGCAAAGCTCTCAGAGCTCCAAGAAACC...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGCCAGGGATGTCACCTTaGGTTCCAGTTGTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVPGMSP*VPVVSG
Trigger: ACCGGAAACAACTGGAACTCAAGGTGACATCCCTGG...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCTGTTGGTTTAACAGCTaGAGAGTCACCATCTTGATC +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFCWFNS*RVTILI
Trigger: GATCAAGATGGTGACTCTTCAGCTGTTAAACCAACA...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTTTGAAGACAGGGTTATaGTCCTCTTCACCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGLKTGL*SSSPGL
Trigger: CAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAA...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTTATTCTCTGATAGACTaGGCTCCTTCCACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGYSLID*APSTRR
Trigger: CCTTCTGGTGGAAGGAGCTCAGTCTATCAGAGAATA...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTAACTGCCCTTTCTTCTaGTGGCTATTCCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSNCPFF*WLFLHL
Trigger: AAGGTGGAGGAATAGCCATCAGAAGAAAGGGCAGTT...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCTCTGGCTGTACTGTATaGAGGCATCAAGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRSGCTV*RHQGWQ
Trigger: TTGCCAACCTTGATGCCTTCATACAGTACAGCCAGA...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTGCTCATGGTGGCTGGTaGTGTTTTTGGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAAHGGW*CFWCCL
Trigger: CAGGCAACACCAAAAACAGCACCAGCCACCATGAGC...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGGCTCATGGTGGCTGGTaGTGTTTTTGGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVAHGGW*CFWCCL
Trigger: CAGGCAACACCAAAAACAGCACCAGCCACCATGAGC...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGTGCATGGACTGCTGTTaGGACCAGTATTGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQCMDCC*DQYCGS
Trigger: ACTCCCACAATACTGGTCGCAACAGCAGTCCATGCA...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCTGTTCCCAGTGACAGTATGCCTTATCCACCAAGTGTGTTGAGGCAGAAGAAATACAGCAGGGCCGTCTaGCACAATGAGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: AVPSDSMPYPPSVLRQKKYSRAV*HNEVLG
Trigger: TCCCAGGACCTCATTGTGGCAGACGGCCCTGCTGTA...TTTCTTCTGCCTCAACACACTTGGTGGATAAGGCATACTGTCACTGGGAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACTCTCTTCCTTCTCTTaGTCCTGTTGGTTTAACAGC +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPLSSFS*SCWFNS
Trigger: GCTGTTAAACCAACAGGAGCAAGAGAAGGAAGAGAG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGCAGAGCTTTCAGAGTTaGCCCTTTAAACAGTTCATC +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEQSFQS*PFKQFI
Trigger: GATGAACTGTTTAAAGGGGCAACTCTGAAAGCTCTG...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTTGCTTAGGGAAGGGTTaGAGAGAAACCTTTGCACCA +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSCLGKG*RETFAP
Trigger: TGGTGCAAAGGTTTCTCTGCAACCCTTCCCTAAGCA...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACAGCCCAGGTCTTGTTaGCGGGGCACAGTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLQPRSC*RGTVEH
Trigger: GTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCTGCCACAACGTTTTGTaGACATTAACTGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFCHNVL*TLTDPD
Trigger: ATCTGGGTCAGTTAATGTGCACAAAACGTTGTGGCA...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGGAAGAATCCCTCAGGTaGCATGAACAATGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEEESLR*HEQWKE
Trigger: TTCTTTCCATTGTTCATGGCACCTGAGGGATTCTTC...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGACATATCCAAAGCCTaGAAGGATGATGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQDISKA*KDDARP
Trigger: TGGCCTGGCATCATCCTTGCAGGCTTTGGATATGTC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCAGCTCTCCTGCTTTGTaGCTTATCTACAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRSSPAL*LIYRSI
Trigger: GATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCT...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGTGGGAGTGCTCATGGTaGCTGGTGCTGTTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVWECSW*LVLFLV
Trigger: CACCAAAAACAGCACCAGCCACCATGAGCACTCCCA...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGTTGCGACCAGTATTGTaGGAGTGCTCATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVLRPVL*ECSWWL
Trigger: CAGCCACCATGAGCACTCCCACAATACTGGTCGCAA...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAGTGTATCGATATGCATaGACTGCTGTTGCGACCAGT +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRVYRYA*TAVATS
Trigger: ACTGGTCGCAACAGCAGTCCATGCATATCGATACAC...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGTACTCTCTGGCTGTGTaGTTCCCCAGAACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVYSLAV*FPRTAA
Trigger: TGCTGCAGTTCTGGGGAACCACACAGCCAGAGAGTA...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGAGGTGCTATAGTTATTaGGCCGAACCATTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEERCYSY*AEPLAQ
Trigger: TTGAGCTAATGGTTCGGCCCAATAACTATAGCACCT...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGATTGGAATCCAGCTGTaGTGGAAGGATGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQIGIQL*WKDGQH
Trigger: ATGCTGCCCATCCTTCCACCACAGCTGGATTCCAAT...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTGCACTTTGGTGAGCTaGCCCCTGAGAAGATCTGTC +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSACTLVS*PLRRSV
Trigger: GACAGATCTTCTCAGGGGCCAGCTCACCAAAGTGCA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGGCAGGTGCTCATCCTTaGCGGAGGCCAACAAATGTT +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVAGAHP*RRPTNV
Trigger: AACATTTGTTGGCCTCCGCCAAGGATGAGCACCTGC...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAAAGGACTGGAACACCTaGTTCATGATCTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPKDWNT*FMIFLT
Trigger: GGTCAAGAAGATCATGAACCAGGTGTTCCAGTCCTT...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTCAGGGACAGTCTTGTaGAGCTTTCTTGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGESGTVL*SFLVVG
Trigger: GCCCACTACAAGAAAGCTCCACAAGACTGTCCCTGA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTGCTCCTGCAACTGTaGAACCTGCCTCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYLLLQL*NLPLCL
Trigger: CAAGCACAGAGGCAGGTTCCACAGTTGCAGGAGCAG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAACAGGTCTGGCGGGGGTaGGGCTCAGAAGGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEQVWRG*GSEGGQ
Trigger: TTGGCCACCTTCTGAGCCCCACCCCCGCCAGACCTG...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTACTCTTACAGGTGACTaGCTTGGAGGGGAACCTACC +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSATLTGD*LGGEPT
Trigger: GGTAGGTTCCCCTCCAAGCCAGTCACCTGTAAGAGT...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAGCAGGGCATGGAACCTaGACACCCTCAGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLAGHGT*TPSALL
Trigger: CAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGC...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCGTAGGGCCCAGGCATaGTCTTGTGTCTTAAGACAG +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSARRAQA*SCVLRQ
Trigger: CTGTCTTAAGACACAAGACCATGCCTGGGCCCTACG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACGTAGGGCCCAGGCATaGTCTTGTGTCTTAAGACAG +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELERRAQA*SCVLRQ
Trigger: CTGTCTTAAGACACAAGACCATGCCTGGGCCCTACG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCTCCATGTCATCCAGGTaGTCATCGGCTACTTCATCA +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLSMSSR*SSATSS
Trigger: TGATGAAGTAGCCGATGACCACCTGGATGACATGGA...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGATCCATGTCATCCAGGTaGTCATCGGCTACTTCATCA +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRSMSSR*SSATSS
Trigger: TGATGAAGTAGCCGATGACCACCTGGATGACATGGA...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAACTAGCCACCCTACATaGGTGTCTCAGATCTTCACA +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRTSHPT*VSQIFT
Trigger: TGTGAAGATCTGAGACACCCATGTAGGGTGGCTAGT...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATAACAGGTGGAGGTGCTaGAAGGGAAACAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYNRWRC*KGNSAG
Trigger: GCCAGCACTGTTTCCCTTCCAGCACCTCCACCTGTT...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTCAGGATAGAGGTGGATaGAGTGGATTCCATGAACAG +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSQDRGG*SGFHEQ
Trigger: CTGTTCATGGAATCCACTCCATCCACCTCTATCCTG...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCTGTTCCCAGTGACAGTATGCCTTATCCACCAAGTGTGTTGAGGCAGAAGAAAAGGGTCTGCTACCCCTaGCAAACAGGCTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: AVPSDSMPYPPSVLRQKKRVCYP*QTGCCH
Trigger: ATGGCAGCAGCCTGTTTGCCAGGGGTAGCAGACCCT...TTTCTTCTGCCTCAACACACTTGGTGGATAAGGCATACTGTCACTGGGAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGGCCGTCTGCCACAATaGGGTCCTGGGAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSGRLPQ*GPGRAL
Trigger: CAGTGCTCTCCCAGGACCTCATTGTGGCAGACGGCC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGATATCAGCCACTTTGCTaGCTGCCATTCGAATTTCAG +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRYQPLC*LPFEFQ
Trigger: CTGAAATTCGAATGGCAGTCAGCAAAGTGGCTGATA...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTTATCAGCCACTTTGCTaGCTGCCATTCGAATTTCAG +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSYQPLC*LPFEFQ
Trigger: CTGAAATTCGAATGGCAGTCAGCAAAGTGGCTGATA...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCTTCCAACTTGCTGCTaGAATCCCAGTGTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRLPTCC*NPSVLE
Trigger: TTCAAGAACACTGGGATTTCAGCAGCAAGTTGGAAG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATTTGTGCACATTAACTaGCCCAGATCTGTAAGACTC +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPFVHIN*PRSVRL
Trigger: GAGTCTTACAGATCTGGGTCAGTTAATGTGCACAAA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCCAACAGAAAGCACATaGACCCTTGTAACAACTGCA +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRPTEST*TLVTTA
Trigger: TGCAGTTGTTACAAGGGTTCATGTGCTTTCTGTTGG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTGGGCAGGTACTGACTaGAGATGCAATCCAACCAAA +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEWAGTD*RCNPTK
Trigger: TTTGGTTGGATTGCATCTTCAGTCAGTACCTGCCCA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATGCCATGGGCAGGTACTaGCTGAAGATGCAATCCAAC +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYAMGRY*LKMQSN
Trigger: GTTGGATTGCATCTTCAGTCAGTACCTGCCCATGGC...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCTGCCTTTGGAACACATaGAGATCATCTCGTCTATGG +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLCLWNT*RSSRLW
Trigger: CCATAGACGAGATGATCTTCATGTGTTCCAAAGGCA...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAATTTGTGTATCGATATaGATGGACTGCTGTTGCGAC +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPICVSI*MDCCCD
Trigger: GTCGCAACAGCAGTCCATGCATATCGATACACAAAT...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCGGTCATCATAAAAGGTaGTATAGTTATTGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFGHHKR*YSYWAE
Trigger: TTCGGCCCAATAACTATAGCACCTTTTATGATGACC...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTTCGAGAGATGACACTTaGATTAAGGCAGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSSRDDT*IKAAEG
Trigger: ACCTTCTGCTGCCTTAATGCAAGTGTCATCTCTCGA...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAAAAGGCCGAACGGGCTaGAGCTGGGAGGTGACGGCA +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEKGRTG*SWEVTA
Trigger: TGCCGTCACCTCCCAGCTGCAGCCCGTTCGGCCTTT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAAGGCTGAGAGAGCGGTaGTGGGTACAAAGGCCGAAC +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLRLRER*WVQRPN
Trigger: GTTCGGCCTTTGTACCCAGCACCGCTCTCTCAGCCT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAATTTCAGTGTTATGTTaGCGGGCTTCAGTCATGAGA +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPISVLC*RASVMR
Trigger: TCTCATGACTGAAGCCCGGCAACATAACACTGAAAT...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATTCTCTTGTTCAGCATaGAATACTCTTGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPFSCSA*NTLACV
Trigger: CACACAGGCAAGAGTATTGCATGCTGAACAAGAGAA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTAGGCTTTCTGTCAGCTaGATCTGCAGCTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSARLSVS*ICSSVS
Trigger: GGAAACAGAGCTGCAGATGCAGCTGACAGAAAGCCT...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAAATTTGGACTGTGCTTaGTCAGAGGTTTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRNLDCA*SEVSWS
Trigger: GCTCCAAGAAACCTCTGAGCAAGCACAGTCCAAATT...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACTTCTTCTTCTTCACTaGTGCTCTCTTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPLLLLH*CSLPSL
Trigger: AAGAGAAGGAAGAGAGCAGCAGTGAAGAAGAAGAAG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAGCGGGCGTCCCTTCATaGTCACCTCGTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLAGVPS*SPRLHP
Trigger: AGGATGAAGACGAGGTGAGCATGAAGGGACGCCCGC...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGGGCTGTGCAAAATCATaGTTAGGGAAGGGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEGCAKS*LGKGCR
Trigger: TCTGCAACCCTTCCCTAAGCATGATTTTGCACAGCC...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAGTAGACACCCCAGAATaGCAACTGAGGCAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEVDTPE*QLRQVK
Trigger: CTTGACTTGCCTCAGTTGGCATTCTGGGGTGTCTAC...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAGAGTTCGGAAGCCATTaGAGCAACCTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEEFGSH*SNLPSQ
Trigger: CTGAGAAGGAAGGTTGCTGCAATGGCTTCCGAACTC...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCTTAGGGTCCCTGTTCTaGCCTCTGTCCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPLGSLF*PLSSPS
Trigger: GCTGGGGCTGGACAGAGGGCAGAACAGGGACCCTAA...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTGTTGCTGCCGTTCCCTaGCCTTTCTTAGGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAVAAVP*PFLGCF
Trigger: AAAACAGCCTAAGAAAGGCCAGGGAACGGCAGCAAC...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACCATCATTCCCACACCTCCATTAAGCATCACAAGGAGTGAGCAGCTGTTCCCATGGGAGTGCTCATGGTaGCTGGTGCTGTTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: TIIPTPPLSITRSEQLFPWECSW*LVLFLV
Trigger: CACCAAAAACAGCACCAGCCACCATGAGCACTCCCA...TGGGAACAGCTGCTCACTCCTTGTGATGCTTAATGGAGGTGTGGGAATGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTTGTGGGAGTGCTCATaGTGGCTGGTGCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSALWECS*WLVLFL
Trigger: CAAAAACAGCACCAGCCACCATGAGCACTCCCACAA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGGAATCCTATACTCTCTaGCTGTGTGGTTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEESYTL*LCGSPE
Trigger: TTCTGGGGAACCACACAGCCAGAGAGTATAGGATTC...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCTGTTCCCAGTGACAGTATGCCTTATCCACCAAGTGTGTTGAGGCAGAAGAAATGTCAGCACCAGGGATaGGAGACGGAGCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: AVPSDSMPYPPSVLRQKKCQHQG*ETELQN
Trigger: ATTCTGCAGCTCCGTCTCCCATCCCTGGTGCTGACA...TTTCTTCTGCCTCAACACACTTGGTGGATAAGGCATACTGTCACTGGGAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCCAGATACAGCTGAGTaGGAATCGAGAGATGACACT +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQPDTAE*ESRDDT
Trigger: AGTGTCATCTCTCGATTCCCACTCAGCTGTATCTGG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGTCTCTCCGTAAGGACTaGAACACCTGGTTCATGATC +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQSLRKD*NTWFMI
Trigger: GATCATGAACCAGGTGTTCCAGTCCTTACGGAGAGA...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCCACCATGGGGGACTCTaGCCTCTCCCTATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPHHGGL*PLPIQG
Trigger: CCCCTGAATAGGGAGAGGCCAGAGTCCCCCATGGTG...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACTTGACAGCTCCTTGTaGGGACCGGTGGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLLDSSL*GPVELV
Trigger: CACTAGCTCCACCGGTCCCCACAAGGAGCTGTCAAG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGTTTGCACCAGTTTCCTaGGTCTTCATCCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVFAPVS*VFIPAS
Trigger: ACTGGCTGGGATGAAGACCCAGGAAACTGGTGCAAA...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAGTGGGGCTCAGAAGGTaGCCAACCCACCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEVGLRR*PTHPLS
Trigger: GCTCAGAGGGTGGGTTGGCCACCTTCTGAGCCCCAC...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACTCACCTTCTTTGCATaGCTTCCTAGACTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELELTFFA*LPRLQD
Trigger: GTCCTGCAGTCTAGGAAGCCATGCAAAGAAGGTGAG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACACTGTCTTCTGCAGTaGTTGCTGGAGATAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEHCLLQ*LLEISQ
Trigger: CTGGCTTATCTCCAGCAACCACTGCAGAAGACAGTG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAATGTCCTACAACACCTaGATTTTCCTTGGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRMSYNT*IFLGVV
Trigger: GACCACACCAAGGAAAATCCAGGTGTTGTAGGACAT...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGATCTCACCAGTTCCATaGGTCACTAGGCTCCCATAT +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQISPVP*VTRLPY
Trigger: ATATGGGAGCCTAGTGACCCATGGAACTGGTGAGAT...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGAGATTCATTCCCTGTTaGCAGAACCCACCACAGGTA +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGERFIPC*QNPPQV
Trigger: TACCTGTGGTGGGTTCTGCCAACAGGGAATGAATCT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGCAGGATAGAGGTGGATaGAGTGGATTCCATGAACAG +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEQDRGG*SGFHEQ
Trigger: CTGTTCATGGAATCCACTCCATCCACCTCTATCCTG...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTTCACCCTCAGCCCCTaGATTTTTCAGGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAFTLSP*IFQVAS
Trigger: AGAAGCCACCTGAAAAATCCAGGGGCTGAGGGTGAA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 72 bp TCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCCATaGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SCFVPYLQEHRP*DFLTSSVFEGQ
Trigger: CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAGATAAGGCACAAAGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 72 bp ATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTaGGGCTCTGCTGTGGGCTACTACCTAGCTTACCCA +
Preference number: 4 (lower is better)
Translates to: MSYNTWIFLGVV*GSAVGYYLAYP
Trigger: TGGGTAAGCTAGGTAGTAGCCCACAGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 72 bp GTTCCCAGTGACAGTATGCCTTATCCACCAAGTGTGTaGAGGCAGAAGAAAGGGTCTGCTACCCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: VPSDSMPYPPSV*RQKKGSATPGK
Trigger: TTTGCCAGGGGTAGCAGACCCTTTCTTCTGCCTCAACACACTTGGTGGATAAGGCATACTGTCACTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp CCTACCCAGAAACTGAAGAAAGTGTATCTTAGGTCACTACCCAGTCATCTGGTGATCCAGTCCAAAAAGTaGGGCCAATCTGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: PTQKLKKVYLRSLPSHLVIQSKK*GQSGTA
Trigger: GGCGGTGCCAGATTGGCCTCACTTTTTGGACTGGAT...CACCAGATGACTGGGTAGTGACCTAAGATACACTTTCTTCAGTTTCTGGGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAGTTTTTGGTGTTGCCTaGTTTCCTGTTGCTGCCGTT +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEVFGVA*FPVAAV
Trigger: AACGGCAGCAACAGGAAATCAGGCAACACCAAAAAC...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAAGCTCAAAGTTCACATaGATCCTAGCAACCGTAACT +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRSSKFT*ILATVT
Trigger: AGTTACGGTTGCTAGGATTCATGTGAACTTTGAGCT...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCGGGAACTAACACTGTaGCCATCAGAGCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYRELTL*PSEPES
Trigger: AGATTCTGGCTCTGATGGTCACAGTGTTAGTTCCCG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AAGAAAGGGTCTGCTACCCCTGGCAAACAGGCTGCTGCCATTGTTTTCTGTGATCGGGAACTAACACTGTaGCCATCAGAGCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: KKGSATPGKQAAAIVFCDRELTL*PSEPES
Trigger: AGATTCTGGCTCTGATGGTCACAGTGTTAGTTCCCG...ATCACAGAAAACAATGGCAGCAGCCTGTTTGCCAGGGGTAGCAGACCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAACCTTAGTCATGAGATaGTCCATTTTATCAGCCACT +
Preference number: 4 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPTLVMR*SILSAT
Trigger: AGTGGCTGATAAAATGGATCATCTCATGACTAAGGT...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGGCTAAACACTTTTCCTaGAGTTGTACCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEAKHFS*SCTSFC
Trigger: GCAGAAGCTGGTACAACTTCAGGAAAAGTGTTTAGC...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAACCCCTCCTCGGGGTCTaGAGTCAGGGACAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEPLLGV*SQGQSC
Trigger: ACAAGACTGTCCCTGACTTCAGACCCCGAGGAGGGG...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGCTGGAATCAAGAAAATaGCCACAAGTATTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEELESRK*PQVFSH
Trigger: GTGAGAAAATACTTGTGGTCATTTTCTTGATTCCAG...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGCTTTATAAGCCTGTCTaGGGACAGAGTCCATCCATC +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVLYKPV*GQSPSI
Trigger: GATGGATGGACTCTGTCCTCAGACAGGCTTATAAAG...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACTTTATAAGCCTGTCTaGGGACAGAGTCCATCCATC +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELELYKPV*GQSPSI
Trigger: GATGGATGGACTCTGTCCTCAGACAGGCTTATAAAG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGATTCACTTAAAATACTaGTTAAGCCATGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEIHLKY*LSHGQV
Trigger: TACCTGCCCATGGCTTAATCAGTATTTTAAGTGAAT...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTAGAATAAGTGACAGCTaGTTAAAGGCAGAGACACAG +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGRISDS*LKAETQ
Trigger: CTGTGTCTCTGCCTTTAATCAGCTGTCACTTATTCT...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGGATGGCAGAAACTGCTaGGACCTATTTCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEDGRNC*DLFPFL
Trigger: AAGAAAGGGAAATAGGTCTCAGCAGTTTCTGCCATC...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAGAGAAGGGTTCTTGGTaGTGCAGGGCATGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLEKGSW*CRAWNL
Trigger: CAGGTTCCATGCCCTGCATCACCAAGAACCCTTCTC...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAAGAGCTCATGTCTCCTaGTGCCCAGGCCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLRAHVS*CPGQST
Trigger: AGTGCTTTGGCCTGGGCATCAGGAGACATGAGCTCT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGCCTCACATTCACCCTaGGAGACAGGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSASHSP*ETGWPR
Trigger: TCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCATTAAGCATCACAAGGAGTGAGCAGCTGTTCCCAGTGACAGTATGCCTTATCAAGCATCACAAGGAGTaGGCAGCTGTTCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: PLSITRSEQLFPVTVCLIKHHKE*AAVPSD
Trigger: GTCACTGGGAACAGCTGCTCACTCCTTGTGATGCTT...GATAAGGCATACTGTCACTGGGAACAGCTGCTCACTCCTTGTGATGCTTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCCTGCAGCACCAAATTTaGCCTGCTTTACATATTGAC +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLLQHQI*PALHID
Trigger: GTCAATATGTAAAGCAGGGCAAATTTGGTGCTGCAG...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCTTAGCAATGCACACCTaGTTATTGAACTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLLAMHT*LLNSTA
Trigger: TGCTGTGGAGTTCAATAAGCAGGTGTGCATTGCTAA...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTTTAGCAATGCACACCTaGTTATTGAACTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGLAMHT*LLNSTA
Trigger: TGCTGTGGAGTTCAATAAGCAGGTGTGCATTGCTAA...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTACCCAGAAACTGAAGAAAGTGTATCTTAGGTCACTACCCAGTCATCTGGTGGATGGGAGACGGAGCTaGAGAATCGCGGGAACTAAC +
Preference number: 4 (lower is better)
Translates to: PTQKLKKVYLRSLPSHLVDGRRS*RIAGTN
Trigger: GTTAGTTCCCGCGATTCTGCAGCTCCGTCTCCCATC...CACCAGATGACTGGGTAGTGACCTAAGATACACTTTCTTCAGTTTCTGGGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAGTAGGCTTGCATACCTaGATAGGGCTGAAAGGATTG +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEVGLHT*IGLKGL
Trigger: CAATCCTTTCAGCCCTATGCAGGTATGCAAGCCTAC...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCATTTCAGTGTTATGTTaGCGGGCTTCAGTCATGAGA +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRISVLC*RASVMR
Trigger: TCTCATGACTGAAGCCCGGCAACATAACACTGAAAT...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAAGCCACTTTGCTGACTaGCATTCGAATTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRSHFAD*HSNFSV
Trigger: AACACTGAAATTCGAATGGCAGTCAGCAAAGTGGCT...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGAATTTGGACTGTGCTTaGTCAGAGGTTTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGENLDCA*SEVSWS
Trigger: GCTCCAAGAAACCTCTGAGCAAGCACAGTCCAAATT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCCAGCTGCTCTGCAGCTaGTTGGTCTGTGGACACTCG +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPQLLCS*LVCGHS
Trigger: CGAGTGTCCACAGACCAAGCAGCTGCAGAGCAGCTG...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACTCCCTATTCAGGGGTaGTTGAGGCTGCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLLPIQG*LRLPRT
Trigger: AGTTCTGGGCAGCCTCAAGCACCCCTGAATAGGGAG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTTGCAGAGAAACCTTTaGACCAGTTTCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGELQRNL*TSFLGL
Trigger: AAGACCCAGGAAACTGGTGCAAAGGTTTCTCTGCAA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAATGCTTAGGGAAGGGTTaGAGAGAAACCTTTGCACCA +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELECLGKG*RETFAP
Trigger: TGGTGCAAAGGTTTCTCTGCAACCCTTCCCTAAGCA...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCTCACTACTGTTCTCTaGATAAGTCCTGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSALTTVL*ISPGPM
Trigger: CATGGGACCAGGACTTATGCAGAGAACAGTAGTGAG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACTCACTACTGTTCTCTaGATAAGTCCTGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELELTTVL*ISPGPM
Trigger: CATGGGACCAGGACTTATGCAGAGAACAGTAGTGAG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAGTGACAGTCAGGCTGTaGTGGCCAAGAGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEVTVRL*WPRAQA
Trigger: AGCCTGGGCTCTTGGCCAGCACAGCCTGACTGTCAC...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATGTAGACACCCCAGAATaGCAACTGAGGCAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYVDTPE*QLRQVK
Trigger: CTTGACTTGCCTCAGTTGGCATTCTGGGGTGTCTAC...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGACAGTGATCTTCAGGTaGAGGCCCCTATCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVTVIFR*RPLSSK
Trigger: TTTGCTAGATAGGGGCCTGCACCTGAAGATCACTGT...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCAAATCTGCCAATTTCCAAGGATGCCTCTCCCCTGCTAGATTCTGAAGCTAATGCAGAAGAAAGGGTCTaGTACCCCTGGCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: PNLPISKDASPLLDSEANAEERV*YPWQTG
Trigger: GCCTGTTTGCCAGGGGTAGCAGACCCTTTCTTCTGC...ATTAGCTTCAGAATCTAGCAGGGGAGAGGCATCCTTGGAAATTGGCAGATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp GAGACCAAGAGCTCTCATGTTCCTTTGAGTCTCGGTCACCTCAACTGTAAGAGGGCCAATTTCCAAGGATaGCTCTCCCCTGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: ETKSSHVPLSLGHLNCKRANFQG*LSPARF
Trigger: GAATCTAGCAGGGGAGAGGCATCCTTGGAAATTGGC...CCTCTTACAGTTGAGGTGACCGAGACTCAAAGGAACATGAGAGCTCTTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCCACCGAACATTGCGTTaGCTTTCACCGGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPHRTLR*LSPGCG
Trigger: CCCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTG...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAGGCTGGTGCTGTTTTTaGTGTTGCCTGATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEGWCCF*CCLISC
Trigger: ACAGGAAATCAGGCAACACCAAAAACAGCACCAGCC...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATTTGTGGGAGTGCTCATaGTGGCTGGTGCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYLWECS*WLVLFL
Trigger: CAAAAACAGCACCAGCCACCATGAGCACTCCCACAA...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GTGGGACTTTTTCCAGTTTCGAGACTCCCCATGTTAATGAGGCATAGCCTATCCTACTCTCTGGCTGTGTaGTTCCCCAGAACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGLFPVSRLPMLMRHSLSYSLAV*FPRTAA
Trigger: TGCTGCAGTTCTGGGGAACCACACAGCCAGAGAGTA...GGATAGGCTATGCCTCATTAACATGGGGAGTCTCGAAACTGGAAAAAGTCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGACCTAGCAACCGTAACTaGCTGTTGTTGACTGATATA +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRPSNRN*LLLTDI
Trigger: TATATCAGTCAACAACAGCCAGTTACGGTTGCTAGG...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTAGGTGCTATAGTTATTaGGCCGAACCATTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSRCYSY*AEPLAQ
Trigger: TTGAGCTAATGGTTCGGCCCAATAACTATAGCACCT...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCATTAAGCATCACAAGGAGTGAGCAGCTGTTCCCAGTGACAGTATGCCTTATCGCCAACAGCACAGGCTaGAGGGACAATAAGCAATCG +
Preference number: 4 (lower is better)
Translates to: PLSITRSEQLFPVTVCLIANSTG*RDNKQS
Trigger: CGATTGCTTATTGTCCCTCCAGCCTGTGCTGTTGGC...GATAAGGCATACTGTCACTGGGAACAGCTGCTCACTCCTTGTGATGCTTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAATGGGCAGCATGGGCTaGCCCATTTTAGCCATCCGA +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLMGSMG*PILAIR
Trigger: TCGGATGGCTAAAATGGGCCAGCCCATGCTGCCCAT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAACTGAGAGAGCGGTGCTaGGTACAAAGGCCGAACGGG +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQELRERC*VQRPNG
Trigger: CCCGTTCGGCCTTTGTACCCAGCACCGCTCTCTCAG...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCGAGAGACCTGTGCAGTaGCCGCTGCTAACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPERPVQ*PLLTPL
Trigger: CAGAGGAGTTAGCAGCGGCCACTGCACAGGTCTCTC...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGATTAGATGGGACTCTCTaGATAGTTGAACCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRLDGTL*IVEPLH
Trigger: GTGAAGAGGTTCAACTATCCAGAGAGTCCCATCTAA...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCTTGATTCATGATGGATaGCAGAAACTGCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLLIHDG*QKLLRP
Trigger: AGGTCTCAGCAGTTTCTGCCATCCATCATGAATCAA...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATATGTATCCCACTTGGTaGGAGGAGGATGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYMYPTW*EEDDKL
Trigger: GAGCTTGTCATCCTCCTCCCACCAAGTGGGATACAT...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCTGGCCCTTTCGGTGTTaGTGCTCCTGCTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPWPFRC*CSCFWL
Trigger: CAGCCAGAAGCAGGAGCACCAACACCGAAAGGGCCA...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAGAAACAGTGCTGGCCTaGCCAGGTCTCCACAACTCT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLETVLA*PGLHNS
Trigger: AGAGTTGTGGAGACCTGGCCAGGCCAGCACTGTTTC...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAAACAGGTGGAGGTGCTaGAAGGGAAACAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLNRWRC*KGNSAG
Trigger: GCCAGCACTGTTTCCCTTCCAGCACCTCCACCTGTT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACCATCATTCCCACACCTCCATTAAGCATCACAAGGAGTGAGCAGCTGTTCCCAGGTGAGATCTGGGTTTaGCAGTTGGTAAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: TIIPTPPLSITRSEQLFPGEIWV*QLVRTA
Trigger: TGCAGTCCTTACCAACTGCCAAACCCAGATCTCACC...TGGGAACAGCTGCTCACTCCTTGTGATGCTTAATGGAGGTGTGGGAATGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR CAA 72 bp CATGAACAATGGAAAGAAGGGACCCTCTCACCTTCTTaGCATGGCTTCCTAGACTGCAGGACTAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HEQWKEGTLSPS*HGFLDCRTKPA
Trigger: TGCAGGCTTAGTCCTGCAGTCTAGGAAGCCATGCAAAGAAGGTGAGAGGGTCCCTTCTTTCCATTGTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGTTTCCGACTCAAACATaGTGGACCAGTTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVFPTQT*WTSSVS
Trigger: AGAGACAGAACTGGTCCATCATGTTTGAGTCGGAAA...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAGCCTATTACCCCTTCTaGGCCAACAGCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEAYYPF*ANSTGW
Trigger: CCAGCCTGTGCTGTTGGCTCAGAAGGGGTAATAGGC...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAATCGAGTCCGTTGCTTaGGTCCAGCCTATTACCCCT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLIESVA*VQPITP
Trigger: AGGGGTAATAGGCTGGACTCAAGCAACGGACTCGAT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCACATCTTCGATTTCTaGATCATTGGAATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQHIFDF*IIGIQL
Trigger: CAGCTGGATTCCAATGATTCAGAAATCGAAGATGTG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAATGGGCTGGCAGCAAGTaGCTCCTCACACTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEWAGSK*LLTLRV
Trigger: GACTCTGAGTGTGAGGAGTCACTTGCTGCCAGCCCA...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCTTCCAACTTGCTGCTaGAATCCCAGTGTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSALPTCC*NPSVLE
Trigger: TTCAAGAACACTGGGATTTCAGCAGCAAGTTGGAAG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTGCTCCCAGGTCAGTCTaGGAGTTAATGAAGAGATTA +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAAPRSV*ELMKRL
Trigger: TAATCTCTTCATTAACTCTCAGACTGACCTGGGAGC...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTTTGTGCACATTAACTaGCCCAGATCTGTAAGACTC +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEFVHIN*PRSVRL
Trigger: GAGTCTTACAGATCTGGGTCAGTTAATGTGCACAAA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCATCATGCCCCAGGGATaGGCTAGGACTACAGTGGTG +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPIMPQG*ARTTVV
Trigger: CACCACTGTAGTCCTAGCTCATCCCTGGGGCATGAT...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGTGGGGAGAGAATAAGTaGCAGCTGATTAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVWGENK*QLIKGR
Trigger: TCTGCCTTTAATCAGCTGTCACTTATTCTCTCCCCA...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTGATTTCATTGATTCATaGTGGATGGCAGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGDFIDS*WMAETA
Trigger: AGCAGTTTCTGCCATCCATCATGAATCAATGAAATC...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCGAGAAGGGTTCTTGGTaGTGCAGGGCATGGAACCTG +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPEKGSW*CRAWNL
Trigger: CAGGTTCCATGCCCTGCATCACCAAGAACCCTTCTC...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAGGTGGCTTCTCTTCCTaGTCTCAAAGCCACACTCCA +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLGGFSS*SQSHTP
Trigger: TGGAGTGTGGCTTTGAGATCAGGAAGAGAAGCCACC...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGATTTGTGTATCGATATaGATGGACTGCTGTTGCGAC +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQICVSI*MDCCCD
Trigger: GTCGCAACAGCAGTCCATGCATATCGATACACAAAT...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCAAATCTGCCAATTTCCAAGGATGCCTCTCCCCTGCTAGATTCTGAAGCTAATGTGGTTCCCCAGAACTaGAGCACCAAATTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PNLPISKDASPLLDSEANVVPQN*STKFAL
Trigger: CAGGGCAAATTTGGTGCTGCAGTTCTGGGGAACCAC...ATTAGCTTCAGAATCTAGCAGGGGAGAGGCATCCTTGGAAATTGGCAGATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTGGTCATCATAAAAGGTaGTATAGTTATTGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSGHHKR*YSYWAE
Trigger: TTCGGCCCAATAACTATAGCACCTTTTATGATGACC...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTTACAGCAGGGCCGTCTaGCACAATGAGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSYSRAV*HNEVLG
Trigger: TCCCAGGACCTCATTGTGGCAGACGGCCCTGCTGTA...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTGGGACTTGTATTTATTaGAAGTTGTTCACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGGTCIY*KLFTEG
Trigger: TCCCTCAGTGAACAACTTGCAATAAATACAAGTCCC...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAAGGCTGAGAGAGCGGTaGTGGGTACAAAGGCCGAAC +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQERLRER*WVQRPN
Trigger: GTTCGGCCTTTGTACCCAGCACCGCTCTCTCAGCCT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGAGCATGCAATACTCTTaGCTGTGTGTTTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVSMQYS*LCVFCG
Trigger: GCCACAGAAAACACACAGGCAAGAGTATTGCATGCT...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAAGCATGCAATACTCTTaGCTGTGTGTTTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELESMQYS*LCVFCG
Trigger: GCCACAGAAAACACACAGGCAAGAGTATTGCATGCT...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCATGTGCTGTTCATTTTaGTTGGTGAGAGCTGTGATT +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRMCCSF*LVRAVI
Trigger: AATCACAGCTCTCACCAAGCAAAATGAACAGCACAT...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGTTCCCAGAATGGTCCTaGCATTGTAAGATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVFPEWS*HCKIPP
Trigger: TGGAGGAATCTTACAATGGCAGGACCATTCTGGGAA...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTTCCCAGAATGGTCCTaGCATTGTAAGATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAFPEWS*HCKIPP
Trigger: TGGAGGAATCTTACAATGGCAGGACCATTCTGGGAA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCCTCCCTATTCAGGGGTaGTTGAGGCTGCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPLPIQG*LRLPRT
Trigger: AGTTCTGGGCAGCCTCAAGCACCCCTGAATAGGGAG...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACTCACAGAACCATCATaGCCCAGGGATGAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLLTEPS*PRDELG
Trigger: TCCTAGCTCATCCCTGGGGCATGATGGTTCTGTGAG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAAGGGAACTGGAAAGCTaGCTGGTGTCTCAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLRELES*LVSQEA
Trigger: GGCTTCTTGAGACACCAGGCAGCTTTCCAGTTCCCT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAGCATTCCCCCATGTTTaGAGGGAACTGGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLAFPHV*RELESC
Trigger: GCAGCTTTCCAGTTCCCTGCAAACATGGGGGAATGC...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATTCTTCGTGGCCTCAATaGCCTCCTTTATCCTCATCT +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYSSWPQ*PPLSSS
Trigger: AGATGAGGATAAAGGAGGGCATTGAGGCCACGAAGA...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCTCTTCACAACTGCACTaGAAGGGAAGTATTCTCATT +
Preference number: 4 (lower is better)
Translates to: LCLISLPAPSLATLHGCLSSQLH*KGSILI
Trigger: AATGAGAATACTTCCCTTGCAGTGCAGTTGTGAAGA...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCATTAAGCATCACAAGGAGTGAGCAGCTGTTCCCAGTGACAGTATGCCTTATCGTTGCTGCCGTTCCCTaGCCTTTCTTAGGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PLSITRSEQLFPVTVCLIVAAVP*PFLGCF
Trigger: AAAACAGCCTAAGAAAGGCCAGGGAACGGCAGCAAC...GATAAGGCATACTGTCACTGGGAACAGCTGCTCACTCCTTGTGATGCTTAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp TGCAGCAGGAGAGTTATCTATGTATCCCAGGGGAAACCAGTCACTAAAATCCTAATGGGCAGCATGGGCTaGCCCATTTTAGCCATCCGA +
Preference number: 4 (lower is better)
Translates to: CSRRVIYVSQGKPVTKILMGSMG*PILAIR
Trigger: TCGGATGGCTAAAATGGGCCAGCCCATGCTGCCCAT...TAGGATTTTAGTGACTGGTTTCCCCTGGGATACATAGATAACTCTCCTGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCGATTTCTGAATCATTaGAATCCAGCTGTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQRFLNH*NPAVVE
Trigger: TTCCACCACAGCTGGATTCCAATGATTCAGAAATCG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGCAGCAGAAGGTGCCTaGAGCCCAGTAACAGATGGC +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSAAEGA*SPVTDG
Trigger: GCCATCTGTTACTGGGCTCCAGGCACCTTCTGCTGC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAGAGAGACCTGTGCAGTaGCCGCTGCTAACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEERPVQ*PLLTPL
Trigger: CAGAGGAGTTAGCAGCGGCCACTGCACAGGTCTCTC...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTATGCACTTTGGTGAGCTaGCCCCTGAGAAGATCTGTC +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLCTLVS*PLRRSV
Trigger: GACAGATCTTCTCAGGGGCCAGCTCACCAAAGTGCA...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGATTGTCCAATTCCTCCTaGTATGACTTGCGAATTTCA +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRLSNSS*YDLRIS
Trigger: TGAAATTCGCAAGTCATACCAGGAGGAATTGGACAA...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAATCAACCCCAGACATCTaGGACTTGTTCTTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELESTPDI*DLFFSS
Trigger: ACTAGAGAAGAACAAGTCCCAGATGTCTGGGGTTGA...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGAAGGACTGGAACACCTaGTTCATGATCTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVKDWNT*FMIFLT
Trigger: GGTCAAGAAGATCATGAACCAGGTGTTCCAGTCCTT...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCCATCCCCAGAGAGACTaGAACGCTGGGAATGATGGC +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPHPQRD*NAGNDG
Trigger: GCCATCATTCCCAGCGTTCCAGTCTCTCTGGGGATG...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATAGGTGCCATGAACAATaGAAAGAAGGGACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYRCHEQ*KEGTLS
Trigger: TGAGAGGGTCCCTTCTTTCCATTGTTCATGGCACCT...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGTTAGATGGGACTCTCTaGATAGTTGAACCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQLDGTL*IVEPLH
Trigger: GTGAAGAGGTTCAACTATCCAGAGAGTCCCATCTAA...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTGTATTTGTGTCACTTTaGCCAGTCTCTAATCCATGT +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSVFVSL*PVSNPC
Trigger: ACATGGATTAGAGACTGGCCAAAGTGACACAAATAC...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGAAGGGAAACAGTGCTaGCCTGGCCAGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSEGKQC*PGQVST
Trigger: TGTGGAGACCTGGCCAGGCCAGCACTGTTTCCCTTC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGCCTGGATTTTTCAGGTaGCTTCTCTTCCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVPGFFR*LLFLIS
Trigger: TGAGATCAGGAAGAGAAGCCACCTGAAAAATCCAGG...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAATGCTGGGGGAGTGGGTaGGGTAATGGTACGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQECWGSG*GNGTWL
Trigger: AAGCCACGTACCATTACCCCACCCACTCCCCCAGCA...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
3UTR CAA 72 bp CCTACCCTTAGATTCCCAAAAGAGCACAGACAGCCCTaGGAACCAAACTCAATTTTTCTCCAAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PTLRFPKEHRQP*EPNSIFLQGLG
Trigger: CCCAAGCCCTTGGAGAAAAATTGAGTTTGGTTCCAAGGGCTGTCTGTGCTCTTTTGGGAATCTAAGGGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACGTAGGTTATCCTTTGCCTGGTTTAGAGATGAGAAAGTGGTAACCAAGGAATGGCCAGCAGCTGCCTaGTCCAGTCCAAAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: ERRLSFAWFRDEKVVTKEWPAAA*SSPKSE
Trigger: CTCACTTTTTGGACTGGATCAGGCAGCTGCTGGCCA...TTCCTTGGTTACCACTTTCTCATCTCTAAACCAGGCAAAGGATAACCTACGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCCCTGCTTTACATATTaGCCATTTGTGTATCGATAT +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRPCFTY*PFVYRY
Trigger: ATATCGATACACAAATGGTCAATATGTAAAGCAGGG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTCCCTGCTTTACATATTaGCCATTTGTGTATCGATAT +
Preference number: 4 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGPCFTY*PFVYRY
Trigger: ATATCGATACACAAATGGTCAATATGTAAAGCAGGG...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTGGGACTTTTTCCAGTTTCGAGACTCCCCATGTTAATGAGGCATAGCCTATCCTGCACACCTGCTTATTaGACTCCACAGCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: VGLFPVSRLPMLMRHSLSCTPAY*TPQQPF
Trigger: AAAAGGCTGCTGTGGAGTTCAATAAGCAGGTGTGCA...GGATAGGCTATGCCTCATTAACATGGGGAGTCTCGAAACTGGAAAAAGTCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp GAGACCAAGAGCTCTCATGTTCCTTTGAGTCTCGGTCACCTCAACTGTAAGAGGAGATCAACTTGGCTTTaGCTGCATCGGGACTTGTAT +
Preference number: 4 (lower is better)
Translates to: ETKSSHVPLSLGHLNCKRRSTWL*LHRDLY
Trigger: ATACAAGTCCCGATGCAGTCAAAGCCAAGTTGATCT...CCTCTTACAGTTGAGGTGACCGAGACTCAAAGGAACATGAGAGCTCTTGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAACCAGTAACAGATGGCTaGGGTGCCTGTGAGGTCATC +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEPVTDG*GACEVI
Trigger: GATGACCTCACAGGCACCTCAGCCATCTGTTACTGG...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACGTAGGTTATCCTTTGCCTGGTTTAGAGATGAGAAAGTGGTAACCAAGGAACCAGTAACAGATGGCTaGGGTGCCTGTGAGGTCATC +
Preference number: 4 (lower is better)
Translates to: ERRLSFAWFRDEKVVTKEPVTDG*GACEVI
Trigger: GATGACCTCACAGGCACCTCAGCCATCTGTTACTGG...TTCCTTGGTTACCACTTTCTCATCTCTAAACCAGGCAAAGGATAACCTACGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCAATCTTTCATTTTCCTaGATGATTCGCTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRNLSFS*MIRWML
Trigger: CAACATCCAGCGAATCATTCAGGAAAATGAAAGATT...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTTGCTCAACATACCTCTaGTTTCGTTCAATTAGTTCA +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSCSTYL*FRSISS
Trigger: TGAACTAATTGAACGAAATCAGAGGTATGTTGAGCA...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCATTTTCAGCTGCAGATaGGAGACCTGTGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPIFSCR*ETCAVA
Trigger: GGCCACTGCACAGGTCTCTCATCTGCAGCTGAAAAT...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATGCTAAACACTTTTCCTaGAGTTGTACCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYAKHFS*SCTSFC
Trigger: GCAGAAGCTGGTACAACTTCAGGAAAAGTGTTTAGC...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGGCCAACCCACCCTCTaGGCCCAAATATTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSGQPTL*AQILFP
Trigger: TGGGAACAATATTTGGGCTCAGAGGGTGGGTTGGCC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTAAATCCCAGTGTTCTTaGAGACAGGGTTATGATCCT +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAKSQCS*RQGYDP
Trigger: AGGATCATAACCCTGTCTTCAAGAACACTGGGATTT...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCCTGGAATCAAGAAAATaGCCACAAGTATTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRLESRK*PQVFSH
Trigger: GTGAGAAAATACTTGTGGTCATTTTCTTGATTCCAG...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCGCCATGGGCAGGTACTaGCTGAAGATGCAATCCAAC +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPAMGRY*LKMQSN
Trigger: GTTGGATTGCATCTTCAGTCAGTACCTGCCCATGGC...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTATTCACTTAAAATACTaGTTAAGCCATGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: DAGHGTWTPSALLLCALSIHLKY*LSHGQV
Trigger: TACCTGCCCATGGCTTAATCAGTATTTTAAGTGAAT...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATTGGGGAGAGAATAAGTaGCAGCTGATTAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYWGENK*QLIKGR
Trigger: TCTGCCTTTAATCAGCTGTCACTTATTCTCTCCCCA...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGAACAGCCAGCCACTTaGGAGGCTCAGAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSEQPAT*EAQKAF
Trigger: GAAAGCCTTCTGAGCCTCTCAAGTGGCTGGCTGTTC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACTGATTTCCTGTTGCTaGCGTTCCCTGGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLLISCC*RSLAFL
Trigger: AAGAAAGGCCAGGGAACGGCAGCAACAGGAAATCAG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp TGCAGCAGGAGAGTTATCTATGTATCCCAGGGGAAACCAGTCACTAAAATCCTATGCCTGATTTCCTGTTaGTGCCGTTCCCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: CSRRVIYVSQGKPVTKILCLISC*CRSLAF
Trigger: AAAGGCCAGGGAACGGCAGCAACAGGAAATCAGGCA...TAGGATTTTAGTGACTGGTTTCCCCTGGGATACATAGATAACTCTCCTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp AAGAAAGGGTCTGCTACCCCTGGCAAACAGGCTGCTGCCATTGTTTTCTGTGATTGCTGTTTTTGGTGTTaGCTGATTTCCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KKGSATPGKQAAAIVFCDCCFWC*LISCCC
Trigger: GCAGCAACAGGAAATCAGGCAACACCAAAAACAGCA...ATCACAGAAAACAATGGCAGCAGCCTGTTTGCCAGGGGTAGCAGACCCTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAACCAGTATTGTGGGAGTaGTCATGGTGGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEPVLWE*SWWLVL
Trigger: CAGCACCAGCCACCATGAGCACTCCCACAATACTGG...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGCTGCAGCACCAAATTTaGCCTGCTTTACATATTGAC +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVLQHQI*PALHID
Trigger: GTCAATATGTAAAGCAGGGCAAATTTGGTGCTGCAG...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCAAATCTGCCAATTTCCAAGGATGCCTCTCCCCTGCTAGATTCTGAAGCTAATCAGGATCGAGTCCGTTaGTTGAGTCCAGCCTATTAC +
Preference number: 4 (lower is better)
Translates to: PNLPISKDASPLLDSEANQDRVR*LSPAYY
Trigger: GTAATAGGCTGGACTCAAGCAACGGACTCGATCCTG...ATTAGCTTCAGAATCTAGCAGGGGAGAGGCATCCTTGGAAATTGGCAGATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAGTTCTTCTATCCGATTaGTCTTTTCAAGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRVLLSD*SFQGSL
Trigger: AAGAGATCCTTGAAAAGAGCAATCGGATAGAAGAAC...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGTTCTCTTGTTCAGCATaGAATACTCTTGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVFSCSA*NTLACV
Trigger: CACACAGGCAAGAGTATTGCATGCTGAACAAGAGAA...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCTTCTTCTTCTTCACTaGTGCTCTCTTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSALLLLH*CSLPSL
Trigger: AAGAGAAGGAAGAGAGCAGCAGTGAAGAAGAAGAAG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCCATGGCTTCCTAGACTaGAGGACTAAGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPHGFLD*RTKPAG
Trigger: TCCTGCAGGCTTAGTCCTGCAGTCTAGGAAGCCATG...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACTACAAAGACAACTCTaGTCAGGGAAACCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLLQRQL*SGKPSP
Trigger: AGGGCTGGGTTTCCCTGAGCAGAGTTGTCTTTGTAG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGTTTGGGGCTGTGTACTaGAAAAATTCATTTCCATGG +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQFGAVY*KNSFPW
Trigger: CCATGGAAATGAATTTTTCCAGTACACAGCCCCAAA...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAGTTGCTGCCGTTCCCTaGCCTTTCTTAGGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLVAAVP*PFLGCF
Trigger: AAAACAGCCTAAGAAAGGCCAGGGAACGGCAGCAAC...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GCTGTTCCCAGTGACAGTATGCCTTATCCACCAAGTGTGTTGAGGCAGAAGAAAGTGTATCGATATGCATaGACTGCTGTTGCGACCAGT +
Preference number: 4 (lower is better)
Translates to: AVPSDSMPYPPSVLRQKKVYRYA*TAVATS
Trigger: ACTGGTCGCAACAGCAGTCCATGCATATCGATACAC...TTTCTTCTGCCTCAACACACTTGGTGGATAAGGCATACTGTCACTGGGAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCGCCAACAGCACAGGCTaGAGGGACAATAAGCAATCG +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPANSTG*RDNKQS
Trigger: CGATTGCTTATTGTCCCTCCAGCCTGTGCTGTTGGC...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTTGTCAGCACCAGGGATaGGAGACGGAGCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSCQHQG*ETELQN
Trigger: ATTCTGCAGCTCCGTCTCCCATCCCTGGTGCTGACA...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCTTTTCTCCAAGGGCTTaGGTCAAGTTTCATTATAGA +
Preference number: 4 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRFSPRA*VKFHYR
Trigger: TCTATAATGAAACTTGACCCAAGCCCTTGGAGAAAA...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACACTGTCTTCTGCAGTaGTTGCTGGAGATAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLHCLLQ*LLEISQ
Trigger: CTGGCTTATCTCCAGCAACCACTGCAGAAGACAGTG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGTATTTGTGTCACTTTaGCCAGTCTCTAATCCATGT +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQVFVSL*PVSNPC
Trigger: ACATGGATTAGAGACTGGCCAAAGTGACACAAATAC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCCTGGATTTTTCAGGTaGCTTCTCTTCCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYPGFFR*LLFLIS
Trigger: TGAGATCAGGAAGAGAAGCCACCTGAAAAATCCAGG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAGACCAAGAGCTCTCATGTTCCTTTGAGTCTCGGTCACCTCAACTGTAAGAGGAGCTCAAAGTTCACATaGATCCTAGCAACCGTAACT +
Preference number: 4 (lower is better)
Translates to: ETKSSHVPLSLGHLNCKRSSKFT*ILATVT
Trigger: AGTTACGGTTGCTAGGATTCATGTGAACTTTGAGCT...CCTCTTACAGTTGAGGTGACCGAGACTCAAAGGAACATGAGAGCTCTTGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp TTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTGGGCCTATTACCCCTTCTaGGCCAACAGCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LFLHLIFMTLERRLSFAWAYYPF*ANSTGW
Trigger: CCAGCCTGTGCTGTTGGCTCAGAAGGGGTAATAGGC...CCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCGCCGGGCTTCAGTCATaGGAAATGAAGCCATATCAC +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPAGLQS*EMKPYH
Trigger: GTGATATGGCTTCATTTCTCATGACTGAAGCCCGGC...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACAATTCCTCCTGGTATaGCTTGCGAATTTCATCTAT +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEQFLLV*LANFIY
Trigger: ATAGATGAAATTCGCAAGTCATACCAGGAGGAATTG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGCAATTCCTCCTGGTATaGCTTGCGAATTTCATCTAT +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVQFLLV*LANFIY
Trigger: ATAGATGAAATTCGCAAGTCATACCAGGAGGAATTG...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAGATTTCATTGATTCATaGTGGATGGCAGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEDFIDS*WMAETA
Trigger: AGCAGTTTCTGCCATCCATCATGAATCAATGAAATC...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTTCAACCAGGTACTGGTaGACCTGCCAACCTCCATCA +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSSTRYW*TCQPPS
Trigger: TGATGGAGGTTGGCAGGTTCACCAGTACCTGGTTGA...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GAACGTAGGTTATCCTTTGCCTGGTTTAGAGATGAGAAAGTGGTAACCAAGGAAAGCAGCTGTTCCCAGTaGCAGTATGCCTTATCCACC +
Preference number: 4 (lower is better)
Translates to: ERRLSFAWFRDEKVVTKESSCSQ*QYALST
Trigger: GGTGGATAAGGCATACTGTCACTGGGAACAGCTGCT...TTCCTTGGTTACCACTTTCTCATCTCTAAACCAGGCAAAGGATAACCTACGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTTGCCTGATTTCCTGTTaGTGCCGTTCCCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSCLISC*CRSLAF
Trigger: AAAGGCCAGGGAACGGCAGCAACAGGAAATCAGGCA...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCTGCTACCCCTGGCAAACAGGCTGCTGCCATTGTTTTCTGTGATCTGCAGCACCAAATTTaGCCTGCTTTACATATTGAC +
Preference number: 4 (lower is better)
Translates to: KKGSATPGKQAAAIVFCDLQHQI*PALHID
Trigger: GTCAATATGTAAAGCAGGGCAAATTTGGTGCTGCAG...ATCACAGAAAACAATGGCAGCAGCCTGTTTGCCAGGGGTAGCAGACCCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAGTGGTTCCCCAGAACTaGAGCACCAAATTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEVVPQN*STKFAL
Trigger: CAGGGCAAATTTGGTGCTGCAGTTCTGGGGAACCAC...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCATTAAGCATCACAAGGAGTGAGCAGCTGTTCCCAGTGACAGTATGCCTTATCTCGAGAGATGACACTTaGATTAAGGCAGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: PLSITRSEQLFPVTVCLISRDDT*IKAAEG
Trigger: ACCTTCTGCTGCCTTAATGCAAGTGTCATCTCTCGA...GATAAGGCATACTGTCACTGGGAACAGCTGCTCACTCCTTGTGATGCTTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATAGCCACTTTGCTGACTaGCATTCGAATTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYSHFAD*HSNFSV
Trigger: AACACTGAAATTCGAATGGCAGTCAGCAAAGTGGCT...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGTTCTTCTATCCGATTaGTCTTTTCAAGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQVLLSD*SFQGSL
Trigger: AAGAGATCCTTGAAAAGAGCAATCGGATAGAAGAAC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTATGTGCTGTTCATTTTaGTTGGTGAGAGCTGTGATT +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAMCCSF*LVRAVI
Trigger: AATCACAGCTCTCACCAAGCAAAATGAACAGCACAT...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCAGAGCTTTCAGAGTTaGCCCTTTAAACAGTTCATC +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYQSFQS*PFKQFI
Trigger: GATGAACTGTTTAAAGGGGCAACTCTGAAAGCTCTG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTCATGGCTTCCTAGACTaGAGGACTAAGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSHGFLD*RTKPAG
Trigger: TCCTGCAGGCTTAGTCCTGCAGTCTAGGAAGCCATG...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAAGCTCTCCTGCTTTGTaGCTTATCTACAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLSSPAL*LIYRSI
Trigger: GATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTGTCACCTAAGACCATaGTTTTTCTTTCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGECHLRP*FFFPLS
Trigger: TGACAATGGAAAGAAAAAGCATGGTCTTAGGTGACA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTCTTCACAACTGCACTaGAAGGGAAGTATTCTCATT +
Preference number: 4 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSASSQLH*KGSILI
Trigger: AATGAGAATACTTCCCTTGCAGTGCAGTTGTGAAGA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAACTCCTCTGTCACCTTaGCCTTCTCTTGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLTPLSP*PSLVQH
Trigger: ATGCTGAACAAGAGAAGGCCAAGGTGACAGAGGAGT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACAGCTGCTTGGTCTGTaGACACTCGAGTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLQLLGL*TLESFS
Trigger: TGAAAAAGACTCGAGTGTCCACAGACCAAGCAGCTG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGCAGGTGCTCATCCTTaGCGGAGGCCAACAAATGTT +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSAGAHP*RRPTNV
Trigger: AACATTTGTTGGCCTCCGCCAAGGATGAGCACCTGC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTACTCTTACAGGTGACTaGCTTGGAGGGGAACCTACC +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSTLTGD*LGGEPT
Trigger: GGTAGGTTCCCCTCCAAGCCAGTCACCTGTAAGAGT...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAAGGTGCCATGAACAATaGAAAGAAGGGACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLRCHEQ*KEGTLS
Trigger: TGAGAGGGTCCCTTCTTTCCATTGTTCATGGCACCT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAACTAGCCACCCTACATaGGTGTCTCAGATCTTCACA +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLTSHPT*VSQIFT
Trigger: TGTGAAGATCTGAGACACCCATGTAGGGTGGCTAGT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp TGCAGCAGGAGAGTTATCTATGTATCCCAGGGGAAACCAGTCACTAAAATCCTAGTTTTTGGTGTTGCCTaGTTTCCTGTTGCTGCCGTT +
Preference number: 4 (lower is better)
Translates to: CSRRVIYVSQGKPVTKILVFGVA*FPVAAV
Trigger: AACGGCAGCAACAGGAAATCAGGCAACACCAAAAAC...TAGGATTTTAGTGACTGGTTTCCCCTGGGATACATAGATAACTCTCCTGCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTATTTCCGACTCAAACATaGTGGACCAGTTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLFPTQT*WTSSVS
Trigger: AGAGACAGAACTGGTCCATCATGTTTGAGTCGGAAA...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCTGCACACCTGCTTATTaGACTCCACAGCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPCTPAY*TPQQPF
Trigger: AAAAGGCTGCTGTGGAGTTCAATAAGCAGGTGTGCA...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAAGATCAACTTGGCTTTaGCTGCATCGGGACTTGTAT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLRSTWL*LHRDLY
Trigger: ATACAAGTCCCGATGCAGTCAAAGCCAAGTTGATCT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAATCCCTCAGGTGCCATaGACAATGGAAAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEIPQVP*TMERRD
Trigger: GTCCCTTCTTTCCATTGTTCATGGCACCTGAGGGAT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGACCTCACAGATTAGATaGAAAGATGGTTGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVTSQIR*KDGCKL
Trigger: AAGCTTACAACCATCTTTTCATCTAATCTGTGAGGT...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCAACTGCCCTTTCTTCTaGTGGCTATTCCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPNCPFF*WLFLHL
Trigger: AAGGTGGAGGAATAGCCATCAGAAGAAAGGGCAGTT...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGATCTGCAGCTGTCCTaGAGCAATGTATCCCACTTG +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSDLQLS*SNVSHL
Trigger: CAAGTGGGATACATTGCTTCAGGACAGCTGCAGATC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCTCTGGCTGTACTGTATaGAGGCATCAAGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPSGCTV*RHQGWQ
Trigger: TTGCCAACCTTGATGCCTTCATACAGTACAGCCAGA...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp GAACGTAGGTTATCCTTTGCCTGGTTTAGAGATGAGAAAGTGGTAACCAAGGAACTGATTTCCTGTTGCTaGCGTTCCCTGGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ERRLSFAWFRDEKVVTKELISCC*RSLAFL
Trigger: AAGAAAGGCCAGGGAACGGCAGCAACAGGAAATCAG...TTCCTTGGTTACCACTTTCTCATCTCTAAACCAGGCAAAGGATAACCTACGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAATGCATGGACTGCTGTTaGGACCAGTATTGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQECMDCC*DQYCGS
Trigger: ACTCCCACAATACTGGTCGCAACAGCAGTCCATGCA...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCTGCTACCCCTGGCAAACAGGCTGCTGCCATTGTTTTCTGTGATCAACTTGGCTTTGACTaGATCGGGACTTGTATTTAT +
Preference number: 4 (lower is better)
Translates to: KKGSATPGKQAAAIVFCDQLGFD*IGTCIY
Trigger: ATAAATACAAGTCCCGATGCAGTCAAAGCCAAGTTG...ATCACAGAAAACAATGGCAGCAGCCTGTTTGCCAGGGGTAGCAGACCCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCGGCTGTGCAAAATCATaGTTAGGGAAGGGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPGCAKS*LGKGCR
Trigger: TCTGCAACCCTTCCCTAAGCATGATTTTGCACAGCC...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCTCTTCGTGGCCTCAATaGCCTCCTTTATCCTCATCT +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPSSWPQ*PPLSSS
Trigger: AGATGAGGATAAAGGAGGGCATTGAGGCCACGAAGA...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTCACCCTCAGCTCTCCTaGTTTGTGCCTTATCTACAG +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSHPQLS*FVPYLQ
Trigger: CTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTG...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GAACGTAGGTTATCCTTTGCCTGGTTTAGAGATGAGAAAGTGGTAACCAAGGAATTGTGGGAGTGCTCATaGTGGCTGGTGCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: ERRLSFAWFRDEKVVTKELWECS*WLVLFL
Trigger: CAAAAACAGCACCAGCCACCATGAGCACTCCCACAA...TTCCTTGGTTACCACTTTCTCATCTCTAAACCAGGCAAAGGATAACCTACGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp TTAAACCATACCATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTGCCACAATGAGGTCCTaGGAGAGCACTGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LNHTILLNILQNVSLPTFATMRS*ESTASR
Trigger: CCTGGATGCAGTGCTCTCCCAGGACCTCATTGTGGC...AAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAATGGTATGGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp TTAAACCATACCATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTGCAGCAGAAGGTGCCTaGAGCCCAGTAACAGATGGC +
Preference number: 4 (lower is better)
Translates to: LNHTILLNILQNVSLPTFAAEGA*SPVTDG
Trigger: GCCATCTGTTACTGGGCTCCAGGCACCTTCTGCTGC...AAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAATGGTATGGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTCATTTTGCTTCCCACTaGGTCTGTAGCTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSHFASH*VCSSAC
Trigger: ACAGGCTGAGCTACAGACCCAGTGGGAAGCAAAATG...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAATTTTCTCCAAGGGCTTaGGTCAAGTTTCATTATAGA +
Preference number: 4 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEFSPRA*VKFHYR
Trigger: TCTATAATGAAACTTGACCCAAGCCCTTGGAGAAAA...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGCAATGTATCCCACTTaGTGGGAGGAGGATGACAAG +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSAMYPT*WEEDDK
Trigger: CTTGTCATCCTCCTCCCACCAAGTGGGATACATTGC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp TTAAACCATACCATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTTTGCGGGGAGGAAGCTaGGTATTCCCAGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LNHTILLNILQNVSLPTFLRGGS*VFPESQ
Trigger: CTGGGACTCTGGGAATACCCAGCTTCCTCCCCGCAA...AAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAATGGTATGGTTTAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp GAACGTAGGTTATCCTTTGCCTGGTTTAGAGATGAGAAAGTGGTAACCAAGGAACATAGTAATTCTCCATaGAGGAGAGGAGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: ERRLSFAWFRDEKVVTKEHSNSP*RRGGMG
Trigger: CCCCATCCCTCCTCTCCTCCATGGAGAATTACTATG...TTCCTTGGTTACCACTTTCTCATCTCTAAACCAGGCAAAGGATAACCTACGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
3UTR CAA 72 bp AAGCTAATCCACGAGACCAAGAGCTCTCATGTTCCTTaGAGTCTCGGTCACCTCAACTGTAAGAGGAAGATA +
Preference number: 4 (lower is better)
Translates to: KLIHETKSSHVP*SLGHLNCKRKI
Trigger: TATCTTCCTCTTACAGTTGAGGTGACCGAGACTCAAAGGAACATGAGAGCTCTTGGTCTCGTGGATTAGCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp GAGACCAAGAGCTCTCATGTTCCTTTGAGTCTCGGTCACCTCAACTGTAAGAGGCCCTGCTTTACATATTaGCCATTTGTGTATCGATAT +
Preference number: 4 (lower is better)
Translates to: ETKSSHVPLSLGHLNCKRPCFTY*PFVYRY
Trigger: ATATCGATACACAAATGGTCAATATGTAAAGCAGGG...CCTCTTACAGTTGAGGTGACCGAGACTCAAAGGAACATGAGAGCTCTTGGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp TTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTGGATCGAGTCCGTTGCTTaGGTCCAGCCTATTACCCCT +
Preference number: 4 (lower is better)
Translates to: LFLHLIFMTLERRLSFAWIESVA*VQPITP
Trigger: AGGGGTAATAGGCTGGACTCAAGCAACGGACTCGAT...CCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATACCTCACAGATTAGATaGAAAGATGGTTGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYTSQIR*KDGCKL
Trigger: AAGCTTACAACCATCTTTTCATCTAATCTGTGAGGT...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAATATTCTCTGATAGACTaGGCTCCTTCCACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEYSLID*APSTRR
Trigger: CCTTCTGGTGGAAGGAGCTCAGTCTATCAGAGAATA...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTACCCAGAAACTGAAGAAAGTGTATCTTAGGTCACTACCCAGTCATCTGGTGTTAGCAATGCACACCTaGTTATTGAACTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PTQKLKKVYLRSLPSHLVLAMHT*LLNSTA
Trigger: TGCTGTGGAGTTCAATAAGCAGGTGTGCATTGCTAA...CACCAGATGACTGGGTAGTGACCTAAGATACACTTTCTTCAGTTTCTGGGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCTCGAGAGATGACACTTaGATTAAGGCAGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPSRDDT*IKAAEG
Trigger: ACCTTCTGCTGCCTTAATGCAAGTGTCATCTCTCGA...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGTAGGCTTGCATACCTaGATAGGGCTGAAAGGATTG +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSVGLHT*IGLKGL
Trigger: CAATCCTTTCAGCCCTATGCAGGTATGCAAGCCTAC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACCTCCTGGTATGACTTaGGAATTTCATCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLPPGMT*EFHLSP
Trigger: AGGAGATAGATGAAATTCGCAAGTCATACCAGGAGG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAACAGTGATCTTCAGGTaGAGGCCCCTATCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQETVIFR*RPLSSK
Trigger: TTTGCTAGATAGGGGCCTGCACCTGAAGATCACTGT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAGGCTGGTGCTGTTTTTaGTGTTGCCTGATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEGWCCF*CCLISC
Trigger: ACAGGAAATCAGGCAACACCAAAAACAGCACCAGCC...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GAACGTAGGTTATCCTTTGCCTGGTTTAGAGATGAGAAAGTGGTAACCAAGGAAGAATCCTATACTCTCTaGCTGTGTGGTTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: ERRLSFAWFRDEKVVTKEESYTL*LCGSPE
Trigger: TTCTGGGGAACCACACAGCCAGAGAGTATAGGATTC...TTCCTTGGTTACCACTTTCTCATCTCTAAACCAGGCAAAGGATAACCTACGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp ACTCTGACTTTGGGGAACTGCTACTGTATGAAATGTACAGGAAGAAGAAAAGAGATTGGAATCCAGCTGTaGTGGAAGGATGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TLTLGNCYCMKCTGRRKEIGIQL*WKDGQH
Trigger: ATGCTGCCCATCCTTCCACCACAGCTGGATTCCAAT...CTCTTTTCTTCTTCCTGTACATTTCATACAGTAGCAGTTCCCCAAAGTCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAACTCCTCTGTCACCTTaGCCTTCTCTTGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQETPLSP*PSLVQH
Trigger: ATGCTGAACAAGAGAAGGCCAAGGTGACAGAGGAGT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAATCTCACCAGTTCCATaGGTCACTAGGCTCCCATAT +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEISPVP*VTRLPY
Trigger: ATATGGGAGCCTAGTGACCCATGGAACTGGTGAGAT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp ACTCTGACTTTGGGGAACTGCTACTGTATGAAATGTACAGGAAGAAGAAAAGAGGAGATGGGTGAGATCTaGGTTTGGCAGTTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: TLTLGNCYCMKCTGRRKEEMGEI*VWQLVR
Trigger: CCTTACCAACTGCCAAACCCAGATCTCACCCATCTC...CTCTTTTCTTCTTCCTGTACATTTCATACAGTAGCAGTTCCCCAAAGTCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCAGCTCAAAGTTCACATaGATCCTAGCAACCGTAACT +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPSSKFT*ILATVT
Trigger: AGTTACGGTTGCTAGGATTCATGTGAACTTTGAGCT...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp GTTAGCCTGCCAACTTTTAGTAGAAAAGAATACAGAAGAACGCGAATATACACGCTGGCTCCCCTGATTTaGAAGGTATTGATGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VSLPTFSRKEYRRTRIYTLAPLI*KVLMWV
Trigger: CACCCACATCAATACCTTTCAAATCAGGGGAGCCAG...CGTGTATATTCGCGTTCTTCTGTATTCTTTTCTACTAAAAGTTGGCAGGCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp CCATTGAGTTTAAAGAAGAAGTGCTCACTGAGATTCCAAACCAAATCTGCCAATGAAGCTAGAGATGGGTaGGATCTGGGTTTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: PLSLKKKCSLRFQTKSANEARDG*DLGLAV
Trigger: AACTGCCAAACCCAGATCTCACCCATCTCTAGCTTC...ATTGGCAGATTTGGTTTGGAATCTCAGTGAGCACTTCTTCTTTAAACTCAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp ATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTAGTAGAAAAGAACCAGTATTGTGGGAGTaGTCATGGTGGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ILLNILQNVSLPTFSRKEPVLWE*SWWLVL
Trigger: CAGCACCAGCCACCATGAGCACTCCCACAATACTGG...TTCTTTTCTACTAAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp CCATTGAGTTTAAAGAAGAAGTGCTCACTGAGATTCCAAACCAAATCTGCCAATTGCATGGACTGCTGTTaGGACCAGTATTGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: PLSLKKKCSLRFQTKSANCMDCC*DQYCGS
Trigger: ACTCCCACAATACTGGTCGCAACAGCAGTCCATGCA...ATTGGCAGATTTGGTTTGGAATCTCAGTGAGCACTTCTTCTTTAAACTCAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp CCTACCCAGAAACTGAAGAAAGTGTATCTTAGGTCACTACCCAGTCATCTGGTGGGTCATCATAAAAGGTaGTATAGTTATTGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: PTQKLKKVYLRSLPSHLVGHHKR*YSYWAE
Trigger: TTCGGCCCAATAACTATAGCACCTTTTATGATGACC...CACCAGATGACTGGGTAGTGACCTAAGATACACTTTCTTCAGTTTCTGGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACAACTTGGCTTTGACTaGATCGGGACTTGTATTTAT +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLQLGFD*IGTCIY
Trigger: ATAAATACAAGTCCCGATGCAGTCAAAGCCAAGTTG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTCTCTCTTCCTTCTCTTaGTCCTGTTGGTTTAACAGC +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSLSSFS*SCWFNS
Trigger: GCTGTTAAACCAACAGGAGCAAGAGAAGGAAGAGAG...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTACCCAGAAACTGAAGAAAGTGTATCTTAGGTCACTACCCAGTCATCTGGTGATTCCAAACCAAATCTaGCAATTTCCAAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: PTQKLKKVYLRSLPSHLVIPNQI*QFPRMP
Trigger: AGGCATCCTTGGAAATTGGCAGATTTGGTTTGGAAT...CACCAGATGACTGGGTAGTGACCTAAGATACACTTTCTTCAGTTTCTGGGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp CCTACCCAGAAACTGAAGAAAGTGTATCTTAGGTCACTACCCAGTCATCTGGTGTTTGGGGCTGTGTACTaGAAAAATTCATTTCCATGG +
Preference number: 4 (lower is better)
Translates to: PTQKLKKVYLRSLPSHLVFGAVY*KNSFPW
Trigger: CCATGGAAATGAATTTTTCCAGTACACAGCCCCAAA...CACCAGATGACTGGGTAGTGACCTAAGATACACTTTCTTCAGTTTCTGGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTATTTGGGGCTGTGTACTaGAAAAATTCATTTCCATGG +
Preference number: 4 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLFGAVY*KNSFPW
Trigger: CCATGGAAATGAATTTTTCCAGTACACAGCCCCAAA...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp GGGCTCTACTTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCGGCTGGTGCTGTTTTTaGTGTTGCCTGATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GLYLFLHLIFMTLERRLSGWCCF*CCLISC
Trigger: ACAGGAAATCAGGCAACACCAAAAACAGCACCAGCC...GGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAAGTAGAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCTTTCATTTTCCTGAATaGTTCGCTGGATGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPFHFPE*FAGCCS
Trigger: TGAGCAACATCCAGCGAATCATTCAGGAAAATGAAA...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAATGTTGGTTTAACAGCTaGAGAGTCACCATCTTGATC +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQECWFNS*RVTILI
Trigger: GATCAAGATGGTGACTCTTCAGCTGTTAAACCAACA...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAAAATCCCAGTGTTCTTaGAGACAGGGTTATGATCCT +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEKSQCS*RQGYDP
Trigger: AGGATCATAACCCTGTCTTCAAGAACACTGGGATTT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp ATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTAGTAGAAAAGAAGCTCATGGTGGCTGGTaGTGTTTTTGGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ILLNILQNVSLPTFSRKEAHGGW*CFWCCL
Trigger: CAGGCAACACCAAAAACAGCACCAGCCACCATGAGC...TTCTTTTCTACTAAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp ACTCTGACTTTGGGGAACTGCTACTGTATGAAATGTACAGGAAGAAGAAAAGAGTCGATATGCATGGACTaGTGTTGCGACCAGTATTGT +
Preference number: 4 (lower is better)
Translates to: TLTLGNCYCMKCTGRRKESICMD*CCDQYC
Trigger: ACAATACTGGTCGCAACAGCAGTCCATGCATATCGA...CTCTTTTCTTCTTCCTGTACATTTCATACAGTAGCAGTTCCCCAAAGTCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCCAACTTGGCTTTGACTaGATCGGGACTTGTATTTAT +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPQLGFD*IGTCIY
Trigger: ATAAATACAAGTCCCGATGCAGTCAAAGCCAAGTTG...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTCCTCCTGGTATGACTTaGGAATTTCATCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSPPGMT*EFHLSP
Trigger: AGGAGATAGATGAAATTCGCAAGTCATACCAGGAGG...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp CCTACCCAGAAACTGAAGAAAGTGTATCTTAGGTCACTACCCAGTCATCTGGTGTGCAGAATGTTAGCCTaGCAACTTTTAGTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: PTQKLKKVYLRSLPSHLVCRMLA*QLLVEK
Trigger: CTTTTCTACTAAAAGTTGGCAGGCTAACATTCTGCA...CACCAGATGACTGGGTAGTGACCTAAGATACACTTTCTTCAGTTTCTGGGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp ACTCTGACTTTGGGGAACTGCTACTGTATGAAATGTACAGGAAGAAGAAAAGAGGCAGTTGGTAAGGACTaGAGCAGGAGAGTTATCTAT +
Preference number: 4 (lower is better)
Translates to: TLTLGNCYCMKCTGRRKEAVGKD*SRRVIY
Trigger: ATAGATAACTCTCCTGCTGCAGTCCTTACCAACTGC...CTCTTTTCTTCTTCCTGTACATTTCATACAGTAGCAGTTCCCCAAAGTCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp ATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTAGTAGAAAAGAATTGCGACCAGTATTGTaGGAGTGCTCATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ILLNILQNVSLPTFSRKELRPVL*ECSWWL
Trigger: CAGCCACCATGAGCACTCCCACAATACTGGTCGCAA...TTCTTTTCTACTAAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp TTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTGGCCAGATACAGCTGAGTaGGAATCGAGAGATGACACT +
Preference number: 4 (lower is better)
Translates to: LFLHLIFMTLERRLSFAWPDTAE*ESRDDT
Trigger: AGTGTCATCTCTCGATTCCCACTCAGCTGTATCTGG...CCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTTTGATTCATGATGGATaGCAGAAACTGCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSLIHDG*QKLLRP
Trigger: AGGTCTCAGCAGTTTCTGCCATCCATCATGAATCAA...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAATTTCATTTTCCTGAATaGTTCGCTGGATGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEFHFPE*FAGCCS
Trigger: TGAGCAACATCCAGCGAATCATTCAGGAAAATGAAA...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCAATCTTTCATTTTCCTaGATGATTCGCTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPNLSFS*MIRWML
Trigger: CAACATCCAGCGAATCATTCAGGAAAATGAAAGATT...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCTGCTCAACATACCTCTaGTTTCGTTCAATTAGTTCA +
Preference number: 4 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPCSTYL*FRSISS
Trigger: TGAACTAATTGAACGAAATCAGAGGTATGTTGAGCA...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGGGACTTGTATTTATTaGAAGTTGTTCACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSGTCIY*KLFTEG
Trigger: TCCCTCAGTGAACAACTTGCAATAAATACAAGTCCC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR GCA 90 bp TTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTGGTTCCCAGTGACAGTATaGCTTATCCACCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LFLHLIFMTLERRLSFAWFPVTV*LIHQVC
Trigger: ACACACTTGGTGGATAAGGCATACTGTCACTGGGAA...CCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp ACTCTGACTTTGGGGAACTGCTACTGTATGAAATGTACAGGAAGAAGAAAAGAGAGGTGCTATAGTTATTaGGCCGAACCATTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: TLTLGNCYCMKCTGRRKERCYSY*AEPLAQ
Trigger: TTGAGCTAATGGTTCGGCCCAATAACTATAGCACCT...CTCTTTTCTTCTTCCTGTACATTTCATACAGTAGCAGTTCCCCAAAGTCAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTTTGTCCAATTCCTCCTaGTATGACTTGCGAATTTCA +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSLSNSS*YDLRIS
Trigger: TGAAATTCGCAAGTCATACCAGGAGGAATTGGACAA...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR TCA 90 bp TTAAACCATACCATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTTTTCCGACTCAAACATaGTGGACCAGTTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LNHTILLNILQNVSLPTFFPTQT*WTSSVS
Trigger: AGAGACAGAACTGGTCCATCATGTTTGAGTCGGAAA...AAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAATGGTATGGTTTAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp TTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTGGCACATCTTCGATTTCTaGATCATTGGAATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFLHLIFMTLERRLSFAWHIFDF*IIGIQL
Trigger: CAGCTGGATTCCAATGATTCAGAAATCGAAGATGTG...CCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp TTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTGGAGAAGAAGTGCTCACTaGGATTCCAAACCAAATCTG +
Preference number: 4 (lower is better)
Translates to: LFLHLIFMTLERRLSFAWRRSAH*DSKPNL
Trigger: CAGATTTGGTTTGGAATCTCAGTGAGCACTTCTTCT...CCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTTGTCACCTAAGACCATaGTTTTTCTTTCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: IELVVLFISLSEDRVHPSCHLRP*FFFPLS
Trigger: TGACAATGGAAAGAAAAAGCATGGTCTTAGGTGACA...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CCA 90 bp TTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTGGCGATTTCTGAATCATTaGAATCCAGCTGTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LFLHLIFMTLERRLSFAWRFLNH*NPAVVE
Trigger: TTCCACCACAGCTGGATTCCAATGATTCAGAAATCG...CCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR TCA 90 bp GGGCTCTACTTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCAAAAATTACAAACTCTaGCTTTGGGGAACTGCTACT +
Preference number: 4 (lower is better)
Translates to: GLYLFLHLIFMTLERRLSKNYKL*LWGTAT
Trigger: AGTAGCAGTTCCCCAAAGTCAGAGTTTGTAATTTTT...GGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAAGTAGAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp CCATTGAGTTTAAAGAAGAAGTGCTCACTGAGATTCCAAACCAAATCTGCCAATGGGACTTGTATTTATTaGAAGTTGTTCACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PLSLKKKCSLRFQTKSANGTCIY*KLFTEG
Trigger: TCCCTCAGTGAACAACTTGCAATAAATACAAGTCCC...ATTGGCAGATTTGGTTTGGAATCTCAGTGAGCACTTCTTCTTTAAACTCAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp TTAAACCATACCATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTCCTAGCAACCGTAACTaGCTGTTGTTGACTGATATA +
Preference number: 4 (lower is better)
Translates to: LNHTILLNILQNVSLPTFPSNRN*LLLTDI
Trigger: TATATCAGTCAACAACAGCCAGTTACGGTTGCTAGG...AAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAATGGTATGGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CCA 90 bp TTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTGGAGGTTATCCTTTGCCTaGTTTAGAGATGAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LFLHLIFMTLERRLSFAWRLSFA*FRDEKV
Trigger: CACTTTCTCATCTCTAAACCAGGCAAAGGATAACCT...CCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp ATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTAGTAGAAAAGAAATTTGTGTATCGATATaGATGGACTGCTGTTGCGAC +
Preference number: 4 (lower is better)
Translates to: ILLNILQNVSLPTFSRKEICVSI*MDCCCD
Trigger: GTCGCAACAGCAGTCCATGCATATCGATACACAAAT...TTCTTTTCTACTAAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR GCA 90 bp TTAAACCATACCATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTCTGACTTTGGGGAACTaGTACTGTATGAAATGTACA +
Preference number: 4 (lower is better)
Translates to: LNHTILLNILQNVSLPTFLTLGN*YCMKCT
Trigger: TGTACATTTCATACAGTAGCAGTTCCCCAAAGTCAG...AAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAATGGTATGGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS GCA 90 bp CGGCGAGAGGAAATCGGTGTCGTCCTCGTCCCCCGCACCGAACATTaGGTTGGCTTTCACCGGGTTGCGGGGAGGAAGCTGGGTATTCCC +
Preference number: 5 (lower is better)
Translates to: RREEIGVVLVPRTEH*VGFHRVAGRKLGIP
Trigger: GGGAATACCCAGCTTCCTCCCCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGGGACGAGGACGACACCGATTTCCTCTCGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414250.2
ENST00000446284.6
CDS TCA 90 bp GAGTCCCCTTTCCTTCTGTGTCCATCCTGGGAAGTGGTGAGGGCCTaGGGAGGCAACGGGACAGCTTCCTCGACCACCTGCTCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: ESPFLLCPSWEVVRA*GGNGTASSTTCSEG
Trigger: GCCCTCAGAGCAGGTGGTCGAGGAAGCTGTCCCGTTGCCTCCTCAGGCCCTCACCACTTCCCAGGATGGACACAGAAGGAAAGGGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 90 bp AGAGCGGTGCTGGGTACAAAGGCCGAACGGGCTGCAGCTGGGAGGTaGCGGCAGATGCCTGGGGATAAGCGTAGGCTTGCATACCTGCAT +
Preference number: 5 (lower is better)
Translates to: RAVLGTKAERAAAGR*RQMPGDKRRLAYLH
Trigger: ATGCAGGTATGCAAGCCTACGCTTATCCCCAGGCATCTGCCGTCACCTCCCAGCTGCAGCCCGTTCGGCCTTTGTACCCAGCACCGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000446284.6
ENST00000489645.1
CDS CCA 90 bp ACTCTGGCCTCTCCCTATTCAGGGGTGCTTGAGGCTGCCCAGAACTaGCTGAGGCTGACTGCTCCTGGGAAGGTCTTCGTGGCCGCTCTT +
Preference number: 5 (lower is better)
Translates to: TLASPYSGVLEAAQN*LRLTAPGKVFVAAL
Trigger: AAGAGCGGCCACGAAGACCTTCCCAGGAGCAGTCAGCCTCAGCCAGTTCTGGGCAGCCTCAAGCACCCCTGAATAGGGAGAGGCCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 90 bp CAGCTTCTGAGTCCCCTTTCCTTCTGTGTCCATCCTGGGAAGTGGTaGGGGCCTGAGGAGGCAACGGGACAGCTTCCTCGACCACCTGCT +
Preference number: 5 (lower is better)
Translates to: QLLSPLSFCVHPGKW*GPEEATGQLPRPPA
Trigger: AGCAGGTGGTCGAGGAAGCTGTCCCGTTGCCTCCTCAGGCCCTCACCACTTCCCAGGATGGACACAGAAGGAAAGGGGACTCAGAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CCA 90 bp CTGCCATTGGGCTGGCAGCAAGTGACTCCTCACACTCAGAGTCCATaGATACAGGGCCTAGGGGCTCAGGTGGAATTGAAGTCGGGGGCC +
Preference number: 5 (lower is better)
Translates to: LPLGWQQVTPHTQSP*IQGLGAQVELKSGA
Trigger: GGCCCCCGACTTCAATTCCACCTGAGCCCCTAGGCCCTGTATCCATGGACTCTGAGTGTGAGGAGTCACTTGCTGCCAGCCCAATGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CCA 90 bp AGAGGAAATCGGTGTCGTCCTCGTCCCCCGCACCGAACATTGCGTTaGCTTTCACCGGGTTGCGGGGAGGAAGCTGGGTATTCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: RGNRCRPRPPHRTLR*LSPGCGEEAGYSQS
Trigger: ACTCTGGGAATACCCAGCTTCCTCCCCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGGGACGAGGACGACACCGATTTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414250.2
ENST00000446284.6
CDS-3UTR CAA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGGGATCAGCAGAGAGGTaGTCAGCACCAGGGATGGGA +
Preference number: 5 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEGSAER*SAPGMG
Trigger: TCCCATCCCTGGTGCTGACAACCTCTCTGCTGATCC...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGTGCTTGACAGCTCCTaGTGGGGACCGGTGGAGCTA +
Preference number: 5 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPVLDSS*WGPVEL
Trigger: TAGCTCCACCGGTCCCCACAAGGAGCTGTCAAGCAC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCAACCTGCCTCTGTGCTaGACAGCTCCTTGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFNLPLC*TAPCGD
Trigger: GTCCCCACAAGGAGCTGTCAAGCACAGAGGCAGGTT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 90 bp ACCCGCCTAACCTCCACCTCGAACACCAGGATCGAGTCCGTTGCTTaGGTCCAGCCTATTACCCCTTCTGAGCCAACAGCACAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: TRLTSTSNTRIESVA*VQPITPSEPTAQAG
Trigger: TCCAGCCTGTGCTGTTGGCTCAGAAGGGGTAATAGGCTGGACTCAAGCAACGGACTCGATCCTGGTGTTCGAGGTGGAGGTTAGGCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS TCA 90 bp CTTCATCCCCAGAGAGACTGGAACGCTGGGAATGATGGCTGGGTCTaGGGGCTGCTCCTGCAACTGTGGAACCTGCCTCTGTGCTTGACA +
Preference number: 5 (lower is better)
Translates to: LHPQRDWNAGNDGWV*GLLLQLWNLPLCLT
Trigger: TGTCAAGCACAGAGGCAGGTTCCACAGTTGCAGGAGCAGCCCTCAGACCCAGCCATCATTCCCAGCGTTCCAGTCTCTCTGGGGATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTGCACCGAACATTGCGTaGGCTTTCACCGGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGAPNIA*AFTGLR
Trigger: CCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTGC...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGTGCAGGTGCTCATCCTaGGCGGAGGCCAACAAATGT +
Preference number: 5 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEECRCSS*AEANKC
Trigger: ACATTTGTTGGCCTCCGCCAAGGATGAGCACCTGCA...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGACCTATTCAGGGGTGCTaGAGGCTGCCCAGAACTGGC +
Preference number: 5 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRPIQGC*RLPRTG
Trigger: GCCAGTTCTGGGCAGCCTCAAGCACCCCTGAATAGG...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAGGGGCTCAGGTGGAATaGAAGTCGGGGGCCCTAGAA +
Preference number: 5 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRGAQVE*KSGALE
Trigger: TTCTAGGGCCCCCGACTTCAATTCCACCTGAGCCCC...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCGGGGCTCAGGTGGAATaGAAGTCGGGGGCCCTAGAA +
Preference number: 5 (lower is better)
Translates to: LCLISLPAPSLATLHGCLGAQVE*KSGALE
Trigger: TTCTAGGGCCCCCGACTTCAATTCCACCTGAGCCCC...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTGTGCTTGACAGCTCCTaGTGGGGACCGGTGGAGCTA +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGVLDSS*WGPVEL
Trigger: TAGCTCCACCGGTCCCCACAAGGAGCTGTCAAGCAC...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCGCCTAGACCCAGGGTaGGCTGTGCAAAATCATGCT +
Preference number: 5 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFRLDPG*AVQNHA
Trigger: AGCATGATTTTGCACAGCCAACCCTGGGTCTAGGCG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGACACCTGGATTTTCCTaGGTGTGGTCTTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LVNLPTSISQQTIAETDGTPGFS*VWSWAL
Trigger: CAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGT...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGCAGATTCATTCCCTGTaGGCAGAACCCACCACAGGT +
Preference number: 5 (lower is better)
Translates to: LVNLPTSISQQTIAETDGQIHSL*AEPTTG
Trigger: ACCTGTGGTGGGTTCTGCCAACAGGGAATGAATCTG...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCACAACTCTGCCTCCTTaGACAGGCATGGCCCTTTCG +
Preference number: 5 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFTTLPP*TGMALS
Trigger: CGAAAGGGCCATGCCTGTCAAAGGAGGCAGAGTTGT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 90 bp CCAGGGATGGGAGACGGAGCTGCAGAATCGCGGGAACTAACACTGTaGCCATCAGAGCCAGAATCTCTGGCAAACTTCACCCGCCTAACC +
Preference number: 5 (lower is better)
Translates to: PGMGDGAAESRELTL*PSEPESLANFTRLT
Trigger: GGTTAGGCGGGTGAAGTTTGCCAGAGATTCTGGCTCTGATGGTCACAGTGTTAGTTCCCGCGATTCTGCAGCTCCGTCTCCCATCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS-3UTR CAA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCGGATCAGCAGAGAGGTaGTCAGCACCAGGGATGGGA +
Preference number: 5 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRGSAER*SAPGMG
Trigger: TCCCATCCCTGGTGCTGACAACCTCTCTGCTGATCC...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAAGGCTGCCCACCTCCTaGCAGAGTGTTCACATCTTC +
Preference number: 5 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPRLPTS*QSVHIF
Trigger: GAAGATGTGAACACTCTGCAAGGAGGTGGGCAGCCT...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCCTGCTCTGCAGCTGCTaGGTCTGTGGACACTCGAGT +
Preference number: 5 (lower is better)
Translates to: LCLISLPAPSLATLHGCLLLCSC*VCGHSS
Trigger: ACTCGAGTGTCCACAGACCAAGCAGCTGCAGAGCAG...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCCTATTCAGGGGTGCTaGAGGCTGCCCAGAACTGGC +
Preference number: 5 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQPIQGC*RLPRTG
Trigger: GCCAGTTCTGGGCAGCCTCAAGCACCCCTGAATAGG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAAACCTGCCTCTGTGCTaGACAGCTCCTTGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRNLPLC*TAPCGD
Trigger: GTCCCCACAAGGAGCTGTCAAGCACAGAGGCAGGTT...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACAGGAGCATCGCCCATaGGACTTCCTGACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPQEHRP*DFLTSS
Trigger: AGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGATTCCTTGGTGTGGTCTaGGGCTCTGCTGTGGGCTAC +
Preference number: 5 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRFLGVV*GSAVGY
Trigger: GTAGCCCACAGCAGAGCCCAAGACCACACCAAGGAA...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTATGGCCCTTTCGGTGTaGGTGCTCCTGCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: DAGHGTWTPSALLLCALSMALSV*VLLLLA
Trigger: AGCCAGAAGCAGGAGCACCAACACCGAAAGGGCCAT...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCATGGCCCTTTCGGTGTaGGTGCTCCTGCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRMALSV*VLLLLA
Trigger: AGCCAGAAGCAGGAGCACCAACACCGAAAGGGCCAT...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTGAAGTCACGACAGATTaGTGCAGCCTGCTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: DAGHGTWTPSALLLCALSEVTTD*CSLLGE
Trigger: CTCCCCCAGCAGGCTGCACAAATCTGTCGTGACTTC...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCGAAGTCACGACAGATTaGTGCAGCCTGCTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: LCLISLPAPSLATLHGCLEVTTD*CSLLGE
Trigger: CTCCCCCAGCAGGCTGCACAAATCTGTCGTGACTTC...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 90 bp AGGATCAGCAGAGAGGTTGTCAGCACCAGGGATGGGAGACGGAGCTaGAGAATCGCGGGAACTAACACTGTGACCATCAGAGCCAGAATC +
Preference number: 5 (lower is better)
Translates to: RISREVVSTRDGRRS*RIAGTNTVTIRARI
Trigger: GATTCTGGCTCTGATGGTCACAGTGTTAGTTCCCGCGATTCTGCAGCTCCGTCTCCCATCCCTGGTGCTGACAACCTCTCTGCTGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CCA 90 bp CCTAGGGGCTCAGGTGGAATTGAAGTCGGGGGCCCTAGAACTCTGTaGGATGGGATGCAAGACAGTTCGGGTGGAAGGGAACCATCTTTT +
Preference number: 5 (lower is better)
Translates to: PRGSGGIEVGGPRTL*DGMQDSSGGREPSF
Trigger: AAAAGATGGTTCCCTTCCACCCGAACTGTCTTGCATCCCATCCCACAGAGTTCTAGGGCCCCCGACTTCAATTCCACCTGAGCCCCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CCA 90 bp GCTCCTGCAACTGTGGAACCTGCCTCTGTGCTTGACAGCTCCTTGTaGGGACCGGTGGAGCTAGTGACATCATCTTTCTTGAGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: APATVEPASVLDSSL*GPVELVTSSFLSCG
Trigger: TCCACAGCTCAAGAAAGATGATGTCACTAGCTCCACCGGTCCCCACAAGGAGCTGTCAAGCACAGAGGCAGGTTCCACAGTTGCAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCCCCCGCACCGAACATaGCGTTGGCTTTCACCGGGT +
Preference number: 5 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYPPHRT*RWLSPG
Trigger: ACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGGG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGATGCACACCTGCTTATaGAACTCCACAGCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: LVNLPTSISQQTIAETDGMHTCL*NSTAAF
Trigger: AAAGGCTGCTGTGGAGTTCAATAAGCAGGTGTGCAT...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACCATCCTCCCAGCCCTaGATGACTTTTCCTGATCCT +
Preference number: 5 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPPSSQP*MTFPDP
Trigger: AGGATCAGGAAAAGTCATCAAGGGCTGGGAGGATGG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCACTGAGGGAGTTAGATTaGGTACGAAGAGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPLRELD*VRRAGS
Trigger: GGAGCCAGCTCTTCGTACCAAATCTAACTCCCTCAG...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGATCCGAGAGATCAACTaGGCTTTGACTGCATCGGGA +
Preference number: 5 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEIREIN*ALTASG
Trigger: TCCCGATGCAGTCAAAGCCAAGTTGATCTCTCGGAT...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTGGGATAAGCGTAGGCTaGCATACCTGCATAGGGCTG +
Preference number: 5 (lower is better)
Translates to: DAGHGTWTPSALLLCALSGISVG*HTCIGL
Trigger: CAGCCCTATGCAGGTATGCAAGCCTACGCTTATCCC...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCAACTCCTCTGTCACCTaGGCCTTCTCTTGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFNSSVT*AFSCSA
Trigger: TGCTGAACAAGAGAAGGCCAAGGTGACAGAGGAGTT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGAGCTTTGCCTGCACTTaGGTGAGCTGGCCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGESFACT*VSWPLR
Trigger: TCTCAGGGGCCAGCTCACCAAAGTGCAGGCAAAGCT...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCTCCTCAGGCTGTGCTTaGGGCCTCAGAGCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRSSGCA*GLRAFR
Trigger: TCTGAAAGCTCTGAGGCCCAAAGCACAGCCTGAGGA...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTTCCTCAGGCTGTGCTTaGGGCCTCAGAGCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGSSGCA*GLRAFR
Trigger: TCTGAAAGCTCTGAGGCCCAAAGCACAGCCTGAGGA...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAACCCTCTCACCTTCTTaGCATGGCTTCCTAGACTGC +
Preference number: 5 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPTLSPS*HGFLDC
Trigger: GCAGTCTAGGAAGCCATGCAAAGAAGGTGAGAGGGT...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTCAGGGAGAAGGGTTCTaGGTGATGCAGGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGQGEGF*VMQGME
Trigger: TTCCATGCCCTGCATCACCAAGAACCCTTCTCCCTG...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGACCCTCATTTTCCCCTTaGCCTAGGATGCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRPSFSP*PRMPGS
Trigger: GCTTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGG...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCACAACTCTGCCTCCTTaGACAGGCATGGCCCTTTCG +
Preference number: 5 (lower is better)
Translates to: LCLISLPAPSLATLHGCLTTLPP*TGMALS
Trigger: CGAAAGGGCCATGCCTGTCAAAGGAGGCAGAGTTGT...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 90 bp CTTCCAAAGAATCTCCAACTTCTACAGCAGGGCCGTCTGCCACAATaGGGTCCTGGGAGAGCACTGCATCCAGGGAAGAGGTACTGTTGC +
Preference number: 5 (lower is better)
Translates to: LPKNLQLLQQGRLPQ*GPGRALHPGKRYCC
Trigger: GCAACAGTACCTCTTCCCTGGATGCAGTGCTCTCCCAGGACCTCATTGTGGCAGACGGCCCTGCTGTAGAAGTTGGAGATTCTTTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS TCA 90 bp CACCAGGATCGAGTCCGTTGCTTGAGTCCAGCCTATTACCCCTTCTaGGCCAACAGCACAGGCTGGAGGGACAATAAGCAATCGCTTTCC +
Preference number: 5 (lower is better)
Translates to: HQDRVRCLSPAYYPF*ANSTGWRDNKQSLS
Trigger: GGAAAGCGATTGCTTATTGTCCCTCCAGCCTGTGCTGTTGGCTCAGAAGGGGTAATAGGCTGGACTCAAGCAACGGACTCGATCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CCA 90 bp GAATCTCCAACTTCTACAGCAGGGCCGTCTGCCACAATGAGGTCCTaGGAGAGCACTGCATCCAGGGAAGAGGTACTGTTGCACTTAGCA +
Preference number: 5 (lower is better)
Translates to: ESPTSTAGPSATMRS*ESTASREEVLLHLA
Trigger: TGCTAAGTGCAACAGTACCTCTTCCCTGGATGCAGTGCTCTCCCAGGACCTCATTGTGGCAGACGGCCCTGCTGTAGAAGTTGGAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CCA 90 bp GCCCACCTCCTTGCAGAGTGTTCACATCTTCGATTTCTGAATCATTaGAATCCAGCTGTGGTGGAAGGATGGGCAGCATGGGCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: AHLLAECSHLRFLNH*NPAVVEGWAAWAGP
Trigger: TGGGCCAGCCCATGCTGCCCATCCTTCCACCACAGCTGGATTCCAATGATTCAGAAATCGAAGATGTGAACACTCTGCAAGGAGGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS-3UTR CAA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGTTGCCTGATTTCCTGTaGCTGCCGTTCCCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQLPDFL*LPFPGL
Trigger: AAGGCCAGGGAACGGCAGCAACAGGAAATCAGGCAA...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCATGCATGGACTGCTGTaGCGACCAGTATTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRMHGLL*RPVLWE
Trigger: CTCCCACAATACTGGTCGCAACAGCAGTCCATGCAT...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCATGCACACCTGCTTATaGAACTCCACAGCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFMHTCL*NSTAAF
Trigger: AAAGGCTGCTGTGGAGTTCAATAAGCAGGTGTGCAT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGGATCGAGTCCGTTGCTaGAGTCCAGCCTATTACCCC +
Preference number: 5 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEDRVRC*SPAYYP
Trigger: GGGGTAATAGGCTGGACTCAAGCAACGGACTCGATC...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCCACCTTGGCCTTCTCTaGTTCAGCATGCAATACTCT +
Preference number: 5 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFHLGLL*FSMQYS
Trigger: AGAGTATTGCATGCTGAACAAGAGAAGGCCAAGGTG...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGTGGTTCATGATCTTCTaGACCTTCTCTGAGGGGTCA +
Preference number: 5 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEEWFMIF*TFSEGS
Trigger: TGACCCCTCAGAGAAGGTCAAGAAGATCATGAACCA...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTACCTTTCCTGATGGGTaGTCGGGCTTAGCTGCCATT +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGTFPDG*SGLAAI
Trigger: AATGGCAGCTAAGCCCGACAACCCATCAGGAAAGGT...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGGCCCAGGCATGGTCTaGTGTCTTAAGACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQGPGMV*CLKTAA
Trigger: AGCAGCTGTCTTAAGACACAAGACCATGCCTGGGCC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTGGAGTTCGGAAGCCATaGCAGCAACCTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGGVRKP*QQPSFS
Trigger: TGAGAAGGAAGGTTGCTGCAATGGCTTCCGAACTCC...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 90 bp CCTAGACCCAGGGTTGGCTGTGCAAAATCATGCTTAGGGAAGGGTTaGAGAGAAACCTTTGCACCAGTTTCCTGGGTCTTCATCCCAGCC +
Preference number: 5 (lower is better)
Translates to: PRPRVGCAKSCLGKG*RETFAPVSWVFIPA
Trigger: GGCTGGGATGAAGACCCAGGAAACTGGTGCAAAGGTTTCTCTGCAACCCTTCCCTAAGCATGATTTTGCACAGCCAACCCTGGGTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 90 bp CAGAGGGTGTTCCTTCTCAGCGACTTACTATCGATATGCATGGACTaGTGTTGCGACCAGTATTGTGGGAGTGCTCATGGTGGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: QRVFLLSDLLSICMD*CCDQYCGSAHGGWC
Trigger: GCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGTAAGTCGCTGAGAAGGAACACCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS CCA 90 bp ATGGACTGCTGTTGCGACCAGTATTGTGGGAGTGCTCATGGTGGCTaGTGCTGTTTTTGGTGTTGCCTGATTTCCTGTTGCTGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: MDCCCDQYCGSAHGG*CCFWCCLISCCCRS
Trigger: GGAACGGCAGCAACAGGAAATCAGGCAACACCAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000462889.1
CDS CCA 90 bp ATGCATGGACTGCTGTTGCGACCAGTATTGTGGGAGTGCTCATGGTaGCTGGTGCTGTTTTTGGTGTTGCCTGATTTCCTGTTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: MHGLLLRPVLWECSW*LVLFLVLPDFLLLP
Trigger: CGGCAGCAACAGGAAATCAGGCAACACCAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000462889.1
CDS-3UTR CAA 90 bp CCTACCCAGAAACTGAAGAAAGTGTATCTTAGGTCACTACCCAGTCATCTGGTGCCCCCGCACCGAACATaGCGTTGGCTTTCACCGGGT +
Preference number: 5 (lower is better)
Translates to: PTQKLKKVYLRSLPSHLVPPHRT*RWLSPG
Trigger: ACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGGG...CACCAGATGACTGGGTAGTGACCTAAGATACACTTTCTTCAGTTTCTGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGATGGCTGGTGCTGTTTTaGGTGTTGCCTGATTTCCTG +
Preference number: 5 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRWLVLF*VLPDFL
Trigger: CAGGAAATCAGGCAACACCAAAAACAGCACCAGCCA...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCTGTTGCGACCAGTATaGTGGGAGTGCTCATGGTGG +
Preference number: 5 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSALLRPV*WECSWW
Trigger: CCACCATGAGCACTCCCACAATACTGGTCGCAACAG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGCCATCCTCCCAGCCCTaGATGACTTTTCCTGATCCT +
Preference number: 5 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEPSSQP*MTFPDP
Trigger: AGGATCAGGAAAAGTCATCAAGGGCTGGGAGGATGG...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTATCCGAGAGATCAACTaGGCTTTGACTGCATCGGGA +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGIREIN*ALTASG
Trigger: TCCCGATGCAGTCAAAGCCAAGTTGATCTCTCGGAT...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTGGTGAACCTGCCAACCTCCATCAGCCAGCAGACCATCGCAGAGACAGACGGGGGAATAAGCATGGAATaGCCAGCACTATGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: LVNLPTSISQQTIAETDGGISME*PALCFC
Trigger: ACAGAAACATAGTGCTGGCAATTCCATGCTTATTCC...CCCGTCTGTCTCTGCGATGGTCTGCTGGCTGATGGAGGTTGGCAGGTTCACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTAACTCCTCTGTCACCTaGGCCTTCTCTTGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGNSSVT*AFSCSA
Trigger: TGCTGAACAAGAGAAGGCCAAGGTGACAGAGGAGTT...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCTCCTCCTGGTATGACTaGCGAATTTCATCTATCTCC +
Preference number: 5 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFSSWYD*RISSIS
Trigger: GGAGATAGATGAAATTCGCAAGTCATACCAGGAGGA...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCAAGAGCTGTCGAAGTTaGTCCAATTCCTCCTGGTAT +
Preference number: 5 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFKSCRS*SNSSWY
Trigger: ATACCAGGAGGAATTGGACAAACTTCGACAGCTCTT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTGCTCTGCAGCTGCTaGGTCTGTGGACACTCGAGT +
Preference number: 5 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYLLCSC*VCGHSS
Trigger: ACTCGAGTGTCCACAGACCAAGCAGCTGCAGAGCAG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCATGGTTCATGATCTTCTaGACCTTCTCTGAGGGGTCA +
Preference number: 5 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPWFMIF*TFSEGS
Trigger: TGACCCCTCAGAGAAGGTCAAGAAGATCATGAACCA...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCGCCTAGACCCAGGGTaGGCTGTGCAAAATCATGCT +
Preference number: 5 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSARLDPG*AVQNHA
Trigger: AGCATGATTTTGCACAGCCAACCCTGGGTCTAGGCG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGCTCAGCTCTCCTGCTTaGTGCCTTATCTACAGGAGC +
Preference number: 5 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGELSSPA*CLIYRS
Trigger: GCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAG...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATTTCCTTGGTGTGGTCTaGGGCTCTGCTGTGGGCTAC +
Preference number: 5 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYFLGVV*GSAVGY
Trigger: GTAGCCCACAGCAGAGCCCAAGACCACACCAAGGAA...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 90 bp TGGGCATTTCCAGATACAGCTGAGTGGGAATCGAGAGATGACACTTaGATTAAGGCAGCAGAAGGTGCCTGGAGCCCAGTAACAGATGGC +
Preference number: 5 (lower is better)
Translates to: WAFPDTAEWESRDDT*IKAAEGAWSPVTDG
Trigger: GCCATCTGTTACTGGGCTCCAGGCACCTTCTGCTGCCTTAATGCAAGTGTCATCTCTCGATTCCCACTCAGCTGTATCTGGAAATGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000489645.1
CDS GCA 90 bp CAGGTGGAATTGAAGTCGGGGGCCCTAGAACTCTGTGGGATGGGATaGAAGACAGTTCGGGTGGAAGGGAACCATCTTTTATCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: QVELKSGALELCGMG*KTVRVEGNHLLSLR
Trigger: TCTCAGAGATAAAAGATGGTTCCCTTCCACCCGAACTGTCTTGCATCCCATCCCACAGAGTTCTAGGGCCCCCGACTTCAATTCCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CCA 90 bp GAATCATTGGAATCCAGCTGTGGTGGAAGGATGGGCAGCATGGGCTaGCCCATTTTAGCCATCCGAGAGATCAACTTGGCTTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: ESLESSCGGRMGSMG*PILAIREINLALTA
Trigger: TGCAGTCAAAGCCAAGTTGATCTCTCGGATGGCTAAAATGGGCCAGCCCATGCTGCCCATCCTTCCACCACAGCTGGATTCCAATGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CCA 90 bp TTTGGTGAGCAGTCATTTTCAGCTGCAGATGAGAGACCTGTGCAGTaGCCGCTGCTAACTCCTCTGTCACCTTGGCCTTCTCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: FGEQSFSAADERPVQ*PLLTPLSPWPSLVQ
Trigger: CTGAACAAGAGAAGGCCAAGGTGACAGAGGAGTTAGCAGCGGCCACTGCACAGGTCTCTCATCTGCAGCTGAAAATGACTGCTCACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATTTGCCTGATTTCCTGTaGCTGCCGTTCCCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYLPDFL*LPFPGL
Trigger: AAGGCCAGGGAACGGCAGCAACAGGAAATCAGGCAA...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGAGTGCTGTTTTTGGTGTaGCCTGATTTCCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRVLFLV*PDFLLL
Trigger: CAGCAACAGGAAATCAGGCAACACCAAAAACAGCAC...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTATGCATGGACTGCTGTaGCGACCAGTATTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAMHGLL*RPVLWE
Trigger: CTCCCACAATACTGGTCGCAACAGCAGTCCATGCAT...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CAGCCCAGGTCTTGTTGCCGGGGCACAGTTGAGCACTGGATTCAGGTAGAGGAGCGAAGCAACTTATCTTaGTTAGCAGTGGAGTCGAAA +
Preference number: 5 (lower is better)
Translates to: QPRSCCRGTVEHWIQVEERSNLS*LAVESK
Trigger: TTTCGACTCCACTGCTAACAAAGATAAGTTGCTTCG...CTCCTCTACCTGAATCCAGTGCTCAACTGTGCCCCGGCAACAAGACCTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTATAGGGCTGAAAGGATaGGGCATTTCCAGATACAGC +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGIGLKG*GISRYS
Trigger: GCTGTATCTGGAAATGCCCAATCCTTTCAGCCCTAT...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATGGGATAAGCGTAGGCTaGCATACCTGCATAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYGISVG*HTCIGL
Trigger: CAGCCCTATGCAGGTATGCAAGCCTACGCTTATCCC...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTCACCTTGAGTTCCAGTaGTTTCCGGTTCTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGHLEFQ*FPVLLF
Trigger: GAAAAGCAGAACCGGAAACAACTGGAACTCAAGGTG...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAATCCAGGGATGTCACCTaGAGTTCCAGTTGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: VTPLGLIRAFPHVCRELESRDVT*SSSCFR
Trigger: CCGGAAACAACTGGAACTCAAGGTGACATCCCTGGA...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTAAGTCAGGGACAGTCTaGTGGAGCTTTCTTGTAGTG +
Preference number: 5 (lower is better)
Translates to: DAGHGTWTPSALLLCALSKSGTV*WSFLVV
Trigger: CACTACAAGAAAGCTCCACAAGACTGTCCCTGACTT...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCTTATCTAGGTGGTATTaGTGTCACTTTGGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFLSRWY*CHFGQS
Trigger: AGACTGGCCAAAGTGACACAAATACCACCTAGATAA...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCAGATTCATTCCCTGTaGGCAGAACCCACCACAGGT +
Preference number: 5 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAQIHSL*AEPTTG
Trigger: ACCTGTGGTGGGTTCTGCCAACAGGGAATGAATCTG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGATGAAGGCATCAAGGTaGGCAAAGCCAAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQMKASR*AKPSCS
Trigger: TGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCAT...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TGCAGCAGGAGAGTTATCTATGTATCCCAGGGGAAACCAGTCACTAAAATCCTAGCACCGAACATTGCGTaGGCTTTCACCGGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: CSRRVIYVSQGKPVTKILAPNIA*AFTGLR
Trigger: CCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTGC...TAGGATTTTAGTGACTGGTTTCCCCTGGGATACATAGATAACTCTCCTGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp GCTGTTCCCAGTGACAGTATGCCTTATCCACCAAGTGTGTTGAGGCAGAAGAAATTGCCTGATTTCCTGTaGCTGCCGTTCCCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: AVPSDSMPYPPSVLRQKKLPDFL*LPFPGL
Trigger: AAGGCCAGGGAACGGCAGCAACAGGAAATCAGGCAA...TTTCTTCTGCCTCAACACACTTGGTGGATAAGGCATACTGTCACTGGGAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp GAGACCAAGAGCTCTCATGTTCCTTTGAGTCTCGGTCACCTCAACTGTAAGAGGCCAGGATCGAGTCCGTaGCTTGAGTCCAGCCTATTA +
Preference number: 5 (lower is better)
Translates to: ETKSSHVPLSLGHLNCKRPGSSP*LESSLL
Trigger: TAATAGGCTGGACTCAAGCAACGGACTCGATCCTGG...CCTCTTACAGTTGAGGTGACCGAGACTCAAAGGAACATGAGAGCTCTTGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCCAGGATCGAGTCCGTaGCTTGAGTCCAGCCTATTA +
Preference number: 5 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYPGSSP*LESSLL
Trigger: TAATAGGCTGGACTCAAGCAACGGACTCGATCCTGG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGGAGATCAACTTGGCTTaGACTGCATCGGGACTTGTA +
Preference number: 5 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQEINLA*TASGLV
Trigger: TACAAGTCCCGATGCAGTCAAAGCCAAGTTGATCTC...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTTCGATTTCTGAATCATaGGAATCCAGCTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: DAGHGTWTPSALLLCALSSISES*ESSCGG
Trigger: TCCACCACAGCTGGATTCCAATGATTCAGAAATCGA...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGATAGGGCTGAAAGGATaGGGCATTTCCAGATACAGC +
Preference number: 5 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQIGLKG*GISRYS
Trigger: GCTGTATCTGGAAATGCCCAATCCTTTCAGCCCTAT...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGGAATTTGGACTGTGCTaGCTCAGAGGTTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGEEFGLC*LRGFLE
Trigger: CTCCAAGAAACCTCTGAGCAAGCACAGTCCAAATTC...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTTGCTGTTCATTTTGCTaGGTGAGAGCTGTGATTTGG +
Preference number: 5 (lower is better)
Translates to: DAGHGTWTPSALLLCALSCCSFC*VRAVIW
Trigger: CCAAATCACAGCTCTCACCAAGCAAAATGAACAGCA...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTAGGATGCCAGGAAGCTaGAAACCAAATGTAGTGAAG +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGRMPGS*KPNVVK
Trigger: CTTCACTACATTTGGTTTCAAGCTTCCTGGCATCCT...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTTGCTTTTTCTTTCCATaGTCATACTGCCTCCCGAAG +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGCFFFP*SYCLPK
Trigger: CTTCGGGAGGCAGTATGACAATGGAAAGAAAAAGCA...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTATGAAGGCATCAAGGTaGGCAAAGCCAAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAMKASR*AKPSCS
Trigger: TGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCAT...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCTTGGCTTTCACCGGGTaGCGGGGAGGAAGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPLAFTG*RGGSWV
Trigger: TACCCAGCTTCCTCCCCGCAACCCGGTGAAAGCCAA...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446284.6
CDS GCA 90 bp TGTATCGATATGCATGGACTGCTGTTGCGACCAGTATTGTGGGAGTaGTCATGGTGGCTGGTGCTGTTTTTGGTGTTGCCTGATTTCCTG +
Preference number: 5 (lower is better)
Translates to: CIDMHGLLLRPVLWE*SWWLVLFLVLPDFL
Trigger: CAGGAAATCAGGCAACACCAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS GCA 90 bp TGGCTGTGCAAAATCATGCTTAGGGAAGGGTTGCAGAGAAACCTTTaGACCAGTTTCCTGGGTCTTCATCCCAGCCAGTCAATGTCATCG +
Preference number: 5 (lower is better)
Translates to: WLCKIMLREGLQRNL*TSFLGLHPSQSMSS
Trigger: CGATGACATTGACTGGCTGGGATGAAGACCCAGGAAACTGGTGCAAAGGTTTCTCTGCAACCCTTCCCTAAGCATGATTTTGCACAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 90 bp ACTATCGATATGCATGGACTGCTGTTGCGACCAGTATTGTGGGAGTaGTCATGGTGGCTGGTGCTGTTTTTGGTGTTGCCTGATTTCCTG +
Preference number: 5 (lower is better)
Translates to: TIDMHGLLLRPVLWE*SWWLVLFLVLPDFL
Trigger: CAGGAAATCAGGCAACACCAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS GCA 90 bp GTGTTCCTTCTCAGCGACTTACTATCGATATGCATGGACTGCTGTTaGGACCAGTATTGTGGGAGTGCTCATGGTGGCTGGTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: VFLLSDLLSICMDCC*DQYCGSAHGGWCCF
Trigger: AAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGTAAGTCGCTGAGAAGGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS CCA 90 bp CGACTTACTATCGATATGCATGGACTGCTGTTGCGACCAGTATTGTaGGAGTGCTCATGGTGGCTGGTGCTGTTTTTGGTGTTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: RLTIDMHGLLLRPVL*ECSWWLVLFLVLPD
Trigger: ATCAGGCAACACCAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGTAAGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS CCA 90 bp AACTTCAGAGGGTGTTCCTTCTCAGCGACTTACTATCGATATGCATaGACTGCTGTTGCGACCAGTATTGTGGGAGTGCTCATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: NFRGCSFSATYYRYA*TAVATSIVGVLMVA
Trigger: AGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGTAAGTCGCTGAGAAGGAACACCCTCTGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS-3UTR CAA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGCACCGAACATTGCGTaGGCTTTCACCGGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: IELVVLFISLSEDRVHPSAPNIA*AFTGLR
Trigger: CCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTGC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAAGTGCTGTTTTTGGTGTaGCCTGATTTCCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEVLFLV*PDFLLL
Trigger: CAGCAACAGGAAATCAGGCAACACCAAAAACAGCAC...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAGCCCTGCTTTACATATaGACCATTTGTGTATCGATA +
Preference number: 5 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPALLYI*TICVSI
Trigger: TATCGATACACAAATGGTCAATATGTAAAGCAGGGC...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAGCCTCACATTCACCCTGAGAGACAGGCTGGCCCAGACAGCATTAGCCCCAAACCGTAACTGGCTGTaGTTGACTGATATAAAGAAG +
Preference number: 5 (lower is better)
Translates to: RSLTFTLRDRLAQTALAPNRNWL*LTDIKK
Trigger: CTTCTTTATATCAGTCAACAACAGCCAGTTACGGTT...TGGGGCTAATGCTGTCTGGGCCAGCCTGTCTCTCAGGGTGAATGTGAGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp ACTGCAGGACTAAGCCTGCAGGAGCAAGAGGATGACTGGACTGGTCCTCACAGACGAAGCAACTTATCTTaGTTAGCAGTGGAGTCGAAA +
Preference number: 5 (lower is better)
Translates to: TAGLSLQEQEDDWTGPHRRSNLS*LAVESK
Trigger: TTTCGACTCCACTGCTAACAAAGATAAGTTGCTTCG...TCTGTGAGGACCAGTCCAGTCATCCTCTTGCTCCTGCAGGCTTAGTCCTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TGCAGCAGGAGAGTTATCTATGTATCCCAGGGGAAACCAGTCACTAAAATCCTAGGATCAGCAGAGAGGTaGTCAGCACCAGGGATGGGA +
Preference number: 5 (lower is better)
Translates to: CSRRVIYVSQGKPVTKILGSAER*SAPGMG
Trigger: TCCCATCCCTGGTGCTGACAACCTCTCTGCTGATCC...TAGGATTTTAGTGACTGGTTTCCCCTGGGATACATAGATAACTCTCCTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTCAGCATGCAATACTCTaGCCTGTGTGTTTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAQHAIL*PVCFLW
Trigger: CCACAGAAAACACACAGGCAAGAGTATTGCATGCTG...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTATGCAGGTGCTCATCCTaGGCGGAGGCCAACAAATGT +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLCRCSS*AEANKC
Trigger: ACATTTGTTGGCCTCCGCCAAGGATGAGCACCTGCA...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCAGGCACTGAGGCTGGAGGGACATGGAGCCCCCTCTTCCAGACACTATACTTCAAACAGCACCGCCTTTaGTTAAGCAACAAAGAAATA +
Preference number: 5 (lower is better)
Translates to: AGTEAGGTWSPLFQTLYFKQHRL*LSNKEI
Trigger: TATTTCTTTGTTGCTTAACAAAAGGCGGTGCTGTTT...GAAGTATAGTGTCTGGAAGAGGGGGCTCCATGTCCCTCCAGCCTCAGTGCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACAGGAGCATCGCCCATaGGACTTCCTGACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLQEHRP*DFLTSS
Trigger: AGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACAGGGAGAAGGGTTCTaGGTGATGCAGGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLQGEGF*VMQGME
Trigger: TTCCATGCCCTGCATCACCAAGAACCCTTCTCCCTG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAGGCCCAGGCATGGTCTaGTGTCTTAAGACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLGPGMV*CLKTAA
Trigger: AGCAGCTGTCTTAAGACACAAGACCATGCCTGGGCC...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GATGCAGGGCATGGAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTTTATCTAGGTGGTATTaGTGTCACTTTGGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: DAGHGTWTPSALLLCALSLSRWY*CHFGQS
Trigger: AGACTGGCCAAAGTGACACAAATACCACCTAGATAA...AGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTCCATGCCCTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TGCTGTGGGCTACTACCTAGCTTACCCACTTCTCAGCACAGCTTAGCTGGTGAGTGCTTTTTCTTTCCATaGTCATACTGCCTCCCGAAG +
Preference number: 5 (lower is better)
Translates to: CCGLLPSLPTSQHSLAGECFFFP*SYCLPK
Trigger: CTTCGGGAGGCAGTATGACAATGGAAAGAAAAAGCA...CTCACCAGCTAAGCTGTGCTGAGAAGTGGGTAAGCTAGGTAGTAGCCCACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCATTAAGCATCACAAGGAGTGAGCAGCTGTTCCCAGTGACAGTATGCCTTATCATCTGGGTTTGGCAGTaGGTAAGGACTGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: PLSITRSEQLFPVTVCLIIWVWQ*VRTAAG
Trigger: TCCTGCTGCAGTCCTTACCAACTGCCAAACCCAGAT...GATAAGGCATACTGTCACTGGGAACAGCTGCTCACTCCTTGTGATGCTTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS GCA 90 bp ACCAAACTTCAGAGGGTGTTCCTTCTCAGCGACTTACTATCGATATaGATGGACTGCTGTTGCGACCAGTATTGTGGGAGTGCTCATGGT +
Preference number: 5 (lower is better)
Translates to: TKLQRVFLLSDLLSI*MDCCCDQYCGSAHG
Trigger: ACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGTAAGTCGCTGAGAAGGAACACCCTCTGAAGTTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS CCA 90 bp CATTTGTGTATCGATATGCATGGACTGCTGTTGCGACCAGTATTGTaGGAGTGCTCATGGTGGCTGGTGCTGTTTTTGGTGTTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: HLCIDMHGLLLRPVL*ECSWWLVLFLVLPD
Trigger: ATCAGGCAACACCAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATACACAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000493847.1
CDS CCA 90 bp CCAGCTCATTGGTATTATTTGGGACATCTGAATATACATGAGATGTaGGAGCACTCTCACCTCTCTGGCTGTGTGGTTCCCCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: PAHWYYLGHLNIHEM*EHSHLSGCVVPQNC
Trigger: GCAGTTCTGGGGAACCACACAGCCAGAGAGGTGAGAGTGCTCCCACATCTCATGTATATTCAGATGTCCCAAATAATACCAATGAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493847.1
CDS-3UTR CAA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCAACCGTAACTGGCTGTaGTTGACTGATATAAAGAAG +
Preference number: 5 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRNRNWL*LTDIKK
Trigger: CTTCTTTATATCAGTCAACAACAGCCAGTTACGGTT...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACCAGGATCGAGTCCGTaGCTTGAGTCCAGCCTATTA +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLPGSSP*LESSLL
Trigger: TAATAGGCTGGACTCAAGCAACGGACTCGATCCTGG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACTGAGGGAGTTAGATTaGGTACGAAGAGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLLRELD*VRRAGS
Trigger: GGAGCCAGCTCTTCGTACCAAATCTAACTCCCTCAG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTCGATTTCTGAATCATaGGAATCCAGCTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSASISES*ESSCGG
Trigger: TCCACCACAGCTGGATTCCAATGATTCAGAAATCGA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTGTGCTTAATAAGCCTGCCCGCTCCATCACTAGCCACCCTACATGGGTGTCTCATGATTCGCTGGATGTaGCTCATAATCATGCTTGTT +
Preference number: 5 (lower is better)
Translates to: LCLISLPAPSLATLHGCLMIRWM*LIIMLV
Trigger: AACAAGCATGATTATGAGCAACATCCAGCGAATCAT...GAGACACCCATGTAGGGTGGCTAGTGATGGAGCGGGCAGGCTTATTAAGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCCAGTGTTCTTGAAGACAGGGTTATGATCCTCTTCACCAGGTCTGGCGGGGGTATGATTCGCTGGATGTaGCTCATAATCATGCTTGTT +
Preference number: 5 (lower is better)
Translates to: PSVLEDRVMILFTRSGGGMIRWM*LIIMLV
Trigger: AACAAGCATGATTATGAGCAACATCCAGCGAATCAT...ACCCCCGCCAGACCTGGTGAAGAGGATCATAACCCTGTCTTCAAGAACACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GAACCTGGACACCCTCAGCTCTCCTGCTTTGTGCCTTATCTACAGGAGCATCGCTGTTCTTCTATCCGATaGCTCTTTTCAAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: EPGHPQLSCFVPYLQEHRCSSIR*LFSRIS
Trigger: AGAGATCCTTGAAAAGAGCAATCGGATAGAAGAACA...GCGATGCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAGGGTGTCCAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAAGCTTTGCCTGCACTTaGGTGAGCTGGCCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQESFACT*VSWPLR
Trigger: TCTCAGGGGCCAGCTCACCAAAGTGCAGGCAAAGCT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATGAATTTGGACTGTGCTaGCTCAGAGGTTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYEFGLC*LRGFLE
Trigger: CTCCAAGAAACCTCTGAGCAAGCACAGTCCAAATTC...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTATCCAGGGATGTCACCTaGAGTTCCAGTTGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLSRDVT*SSSCFR
Trigger: CCGGAAACAACTGGAACTCAAGGTGACATCCCTGGA...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTTGCTGTTCATTTTGCTaGGTGAGAGCTGTGATTTGG +
Preference number: 5 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSACCSFC*VRAVIW
Trigger: CCAAATCACAGCTCTCACCAAGCAAAATGAACAGCA...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAACCTTTCCTGATGGGTaGTCGGGCTTAGCTGCCATT +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLTFPDG*SGLAAI
Trigger: AATGGCAGCTAAGCCCGACAACCCATCAGGAAAGGT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGATATGCCACAACGTTTaGTGCACATTAACTGACCCA +
Preference number: 5 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQICHNV*CTLTDP
Trigger: TGGGTCAGTTAATGTGCACAAAACGTTGTGGCATAT...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGCTCACCTTTCTGCCTTaGGAACACATGAAGATCATC +
Preference number: 5 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVLTFLP*EHMKII
Trigger: GATGATCTTCATGTGTTCCAAAGGCAGAAAGGTGAG...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGAGGATGCCAGGAAGCTaGAAACCAAATGTAGTGAAG +
Preference number: 5 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVRMPGS*KPNVVK
Trigger: CTTCACTACATTTGGTTTCAAGCTTCCTGGCATCCT...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCCCCTCATTTTCCCCTTaGCCTAGGATGCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPPSFSP*PRMPGS
Trigger: GCTTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGG...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 90 bp GTCTTCGTGGCCGCTCTTCTGCTTTTTCTTCTTCTTCTTCACTGCTaGTCTCTTCCTTCTCTTGCTCCTGTTGGTTTAACAGCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: VFVAALLLFLLLLHC*SLPSLAPVGLTAEE
Trigger: CTCTTCAGCTGTTAAACCAACAGGAGCAAGAGAAGGAAGAGAGCAGCAGTGAAGAAGAAGAAGAAAAAGCAGAAGAGCGGCCACGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CCA 90 bp TCATGCTTAGGGAAGGGTTGCAGAGAAACCTTTGCACCAGTTTCCTaGGTCTTCATCCCAGCCAGTCAATGTCATCGTCATCATCATCAT +
Preference number: 5 (lower is better)
Translates to: SCLGKGCRETFAPVS*VFIPASQCHRHHHH
Trigger: ATGATGATGATGACGATGACATTGACTGGCTGGGATGAAGACCCAGGAAACTGGTGCAAAGGTTTCTCTGCAACCCTTCCCTAAGCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAACTGTTGCGACCAGTATaGTGGGAGTGCTCATGGTGG +
Preference number: 5 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQELLRPV*WECSWW
Trigger: CCACCATGAGCACTCCCACAATACTGGTCGCAACAG...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCTACCCAGAAACTGAAGAAAGTGTATCTTAGGTCACTACCCAGTCATCTGGTGAGGGAAGAGGTACTGTaGCACTTAGCAATGCACACC +
Preference number: 5 (lower is better)
Translates to: PTQKLKKVYLRSLPSHLVREEVL*HLAMHT
Trigger: GGTGTGCATTGCTAAGTGCAACAGTACCTCTTCCCT...CACCAGATGACTGGGTAGTGACCTAAGATACACTTTCTTCAGTTTCTGGGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGATCGAGTCCGTTGCTaGAGTCCAGCCTATTACCCC +
Preference number: 5 (lower is better)
Translates to: IELVVLFISLSEDRVHPSDRVRC*SPAYYP
Trigger: GGGGTAATAGGCTGGACTCAAGCAACGGACTCGATC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAAGGCTGCCCACCTCCTaGCAGAGTGTTCACATCTTC +
Preference number: 5 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQERLPTS*QSVHIF
Trigger: GAAGATGTGAACACTCTGCAAGGAGGTGGGCAGCCT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GAACGTAGGTTATCCTTTGCCTGGTTTAGAGATGAGAAAGTGGTAACCAAGGAAAGGCTGCCCACCTCCTaGCAGAGTGTTCACATCTTC +
Preference number: 5 (lower is better)
Translates to: ERRLSFAWFRDEKVVTKERLPTS*QSVHIF
Trigger: GAAGATGTGAACACTCTGCAAGGAGGTGGGCAGCCT...TTCCTTGGTTACCACTTTCTCATCTCTAAACCAGGCAAAGGATAACCTACGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATAATTTCAGTGTTATGTaGCCGGGCTTCAGTCATGAG +
Preference number: 5 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYNFSVM*PGFSHE
Trigger: CTCATGACTGAAGCCCGGCAACATAACACTGAAATT...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATTCCTCCTGGTATGACTaGCGAATTTCATCTATCTCC +
Preference number: 5 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYSSWYD*RISSIS
Trigger: GGAGATAGATGAAATTCGCAAGTCATACCAGGAGGA...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTCACCTTTCTGCCTTaGGAACACATGAAGATCATC +
Preference number: 5 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYLTFLP*EHMKII
Trigger: GATGATCTTCATGTGTTCCAAAGGCAGAAAGGTGAG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCGGAGTTCGGAAGCCATaGCAGCAACCTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPGVRKP*QQPSFS
Trigger: TGAGAAGGAAGGTTGCTGCAATGGCTTCCGAACTCC...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 90 bp AGTCTTTTTCAAGAGCTGTCGAAGTTTGTCCAATTCCTCCTGGTATaGCTTGCGAATTTCATCTATCTCCTCCTCGGCCTGAGAACGCTC +
Preference number: 5 (lower is better)
Translates to: SLFQELSKFVQFLLV*LANFIYLLLGLRTL
Trigger: GAGCGTTCTCAGGCCGAGGAGGAGATAGATGAAATTCGCAAGTCATACCAGGAGGAATTGGACAAACTTCGACAGCTCTTGAAAAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 90 bp TCCTCCTCCAGGGATGTCACCTTGAGTTCCAGTTGTTTCCGGTTCTaGTTTTCACTTTTGAATTTGGACTGTGCTTGCTCAGAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SSSRDVTLSSSCFRF*FSLLNLDCACSEVS
Trigger: AGAAACCTCTGAGCAAGCACAGTCCAAATTCAAAAGTGAAAAGCAGAACCGGAAACAACTGGAACTCAAGGTGACATCCCTGGAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 90 bp TTTTCAAGAGCTGTCGAAGTTTGTCCAATTCCTCCTGGTATGACTTaGGAATTTCATCTATCTCCTCCTCGGCCTGAGAACGCTCTTGAG +
Preference number: 5 (lower is better)
Translates to: FSRAVEVCPIPPGMT*EFHLSPPRPENALE
Trigger: CTCAAGAGCGTTCTCAGGCCGAGGAGGAGATAGATGAAATTCGCAAGTCATACCAGGAGGAATTGGACAAACTTCGACAGCTCTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 90 bp AAGGTCTTCGTGGCCGCTCTTCTGCTTTTTCTTCTTCTTCTTCACTaGTGCTCTCTTCCTTCTCTTGCTCCTGTTGGTTTAACAGCTGAA +
Preference number: 5 (lower is better)
Translates to: KVFVAALLLFLLLLH*CSLPSLAPVGLTAE
Trigger: TTCAGCTGTTAAACCAACAGGAGCAAGAGAAGGAAGAGAGCAGCAGTGAAGAAGAAGAAGAAAAAGCAGAAGAGCGGCCACGAAGACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 90 bp TCACCTCTCTGGCTGTGTGGTTCCCCAGAACTGCAGCACCAAATTTaGCCTGCTTTACATATTGACCATTTGTGTATCGATATGCATGGA +
Preference number: 5 (lower is better)
Translates to: SPLWLCGSPELQHQI*PALHIDHLCIDMHG
Trigger: TCCATGCATATCGATACACAAATGGTCAATATGTAAAGCAGGGCAAATTTGGTGCTGCAGTTCTGGGGAACCACACAGCCAGAGAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493847.1
CDS-3UTR CAA 90 bp CCAAATCTGCCAATTTCCAAGGATGCCTCTCCCCTGCTAGATTCTGAAGCTAATGTGCTGTTTTTGGTGTaGCCTGATTTCCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: PNLPISKDASPLLDSEANVLFLV*PDFLLL
Trigger: CAGCAACAGGAAATCAGGCAACACCAAAAACAGCAC...ATTAGCTTCAGAATCTAGCAGGGGAGAGGCATCCTTGGAAATTGGCAGATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCAGGGAAGAGGTACTGTaGCACTTAGCAATGCACACC +
Preference number: 5 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPREEVL*HLAMHT
Trigger: GGTGTGCATTGCTAAGTGCAACAGTACCTCTTCCCT...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GCCGTAATGTCCTACAACACCTGGATTTTCCTTGGTGTGGTCTTGGGCTCTGCTATTTTATCAGCCACTTaGCTGACTGCCATTCGAATT +
Preference number: 5 (lower is better)
Translates to: AVMSYNTWIFLGVVLGSAILSAT*LTAIRI
Trigger: AATTCGAATGGCAGTCAGCAAAGTGGCTGATAAAAT...AGCAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGTTGTAGGACATTACGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTGTATGAAGGCATCAAGGTTGGCAAAGCCAAGCTGCTCAACCAGGTACTGGTGTGTTCTTCTATCCGATaGCTCTTTTCAAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: LYEGIKVGKAKLLNQVLVCSSIR*LFSRIS
Trigger: AGAGATCCTTGAAAAGAGCAATCGGATAGAAGAACA...CACCAGTACCTGGTTGAGCAGCTTGGCTTTGCCAACCTTGATGCCTTCATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCGTTGCAGAGAAACCTTaGCACCAGTTTCCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPVAEKP*HQFPGS
Trigger: AGACCCAGGAAACTGGTGCAAAGGTTTCTCTGCAAC...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGAAACAGCACCGCCTTTaGTTAAGCAACAAAGAAATA +
Preference number: 5 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQKQHRL*LSNKEI
Trigger: TATTTCTTTGTTGCTTAACAAAAGGCGGTGCTGTTT...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAACTCAGCTCTCCTGCTTaGTGCCTTATCTACAGGAGC +
Preference number: 5 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQELSSPA*CLIYRS
Trigger: GCTCCTGTAGATAAGGCACAAAGCAGGAGAGCTGAG...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAACACCTGGATTTTCCTaGGTGTGGTCTTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQETPGFS*VWSWAL
Trigger: CAGAGCCCAAGACCACACCAAGGAAAATCCAGGTGT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CTACAGGAGCATCGCCCATTGGACTTCCTGACCTCTTCTGTCTTTGAGGGACAGCATATAAATAGGACCTaGCAGTACTCATCACTTAAC +
Preference number: 5 (lower is better)
Translates to: LQEHRPLDFLTSSVFEGQHINRT*QYSSLN
Trigger: GTTAAGTGATGAGTACTGCAAGGTCCTATTTATATG...CTGTCCCTCAAAGACAGAAGAGGTCAGGAAGTCCAATGGGCGATGCTCCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TTAAACCATACCATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTTTGGCTTTCACCGGGTaGCGGGGAGGAAGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: LNHTILLNILQNVSLPTFLAFTG*RGGSWV
Trigger: TACCCAGCTTCCTCCCCGCAACCCGGTGAAAGCCAA...AAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAATGGTATGGTTTAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS TCA 90 bp TGTTCAGCATGCAATACTCTTGCCTGTGTGTTTTCTGTGGCTGTCTaGAGTGAGTTGTTCCTCTTCTCCATCATCAGGTTACTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: CSACNTLACVFSVAV*SELFLFSIIRLLCS
Trigger: TGAGCAGAGTAACCTGATGATGGAGAAGAGGAACAACTCACTTCAGACAGCCACAGAAAACACACAGGCAAGAGTATTGCATGCTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 90 bp CTTTACATATTGACCATTTGTGTATCGATATGCATGGACTGCTGTTaGGACCAGTATTGTGGGAGTGCTCATGGTGGCTGGTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: LYILTICVSICMDCC*DQYCGSAHGGWCCF
Trigger: AAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATACACAAATGGTCAATATGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000493847.1
CDS GCA 90 bp ATCTGGGACTTGTTCTTCTCTAGTTCCTTGATGTGCTGTTCATTTTaGTTGGTGAGAGCTGTGATTTGGGCCTGGAGGGCTAAACACTTT +
Preference number: 5 (lower is better)
Translates to: IWDLFFSSSLMCCSF*LVRAVIWAWRAKHF
Trigger: AAAGTGTTTAGCCCTCCAGGCCCAAATCACAGCTCTCACCAAGCAAAATGAACAGCACATCAAGGAACTAGAGAAGAACAAGTCCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTGGCTGTTGCGACCAGTATaGTGGGAGTGCTCATGGTGG +
Preference number: 5 (lower is better)
Translates to: LFLHLIFMTLERRLSFAWLLRPV*WECSWW
Trigger: CCACCATGAGCACTCCCACAATACTGGTCGCAACAG...CCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp ACTCTGACTTTGGGGAACTGCTACTGTATGAAATGTACAGGAAGAAGAAAAGAGATGCATGGACTGCTGTaGCGACCAGTATTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: TLTLGNCYCMKCTGRRKEMHGLL*RPVLWE
Trigger: CTCCCACAATACTGGTCGCAACAGCAGTCCATGCAT...CTCTTTTCTTCTTCCTGTACATTTCATACAGTAGCAGTTCCCCAAAGTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAAGGGAAGAGGTACTGTaGCACTTAGCAATGCACACC +
Preference number: 5 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEREEVL*HLAMHT
Trigger: GGTGTGCATTGCTAAGTGCAACAGTACCTCTTCCCT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GGGCTCTACTTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCCTGAGGGAGTTAGATTaGGTACGAAGAGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GLYLFLHLIFMTLERRLSLRELD*VRRAGS
Trigger: GGAGCCAGCTCTTCGTACCAAATCTAACTCCCTCAG...GGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAAGTAGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp CCTACCCAGAAACTGAAGAAAGTGTATCTTAGGTCACTACCCAGTCATCTGGTGTCGATTTCTGAATCATaGGAATCCAGCTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: PTQKLKKVYLRSLPSHLVSISES*ESSCGG
Trigger: TCCACCACAGCTGGATTCCAATGATTCAGAAATCGA...CACCAGATGACTGGGTAGTGACCTAAGATACACTTTCTTCAGTTTCTGGGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAAATTTCAGTGTTATGTaGCCGGGCTTCAGTCATGAG +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLNFSVM*PGFSHE
Trigger: CTCATGACTGAAGCCCGGCAACATAACACTGAAATT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAAAGAGCTGTCGAAGTTaGTCCAATTCCTCCTGGTAT +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLKSCRS*SNSSWY
Trigger: ATACCAGGAGGAATTGGACAAACTTCGACAGCTCTT...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAGTTGCAGAGAAACCTTaGCACCAGTTTCCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEVAEKP*HQFPGS
Trigger: AGACCCAGGAAACTGGTGCAAAGGTTTCTCTGCAAC...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GTCACACCTTTAGGACTGATCAGGGCATTCCCCCATGTTTGCAGGGAACTGGAACATATAAATAGGACCTaGCAGTACTCATCACTTAAC +
Preference number: 5 (lower is better)
Translates to: VTPLGLIRAFPHVCRELEHINRT*QYSSLN
Trigger: GTTAAGTGATGAGTACTGCAAGGTCCTATTTATATG...TTCCAGTTCCCTGCAAACATGGGGGAATGCCCTGATCAGTCCTAAAGGTGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCATTAAGCATCACAAGGAGTGAGCAGCTGTTCCCAGTGACAGTATGCCTTATCAACGTAGGTTATCCTTaGCCTGGTTTAGAGATGAGA +
Preference number: 5 (lower is better)
Translates to: PLSITRSEQLFPVTVCLINVGYP*PGLEMR
Trigger: TCTCATCTCTAAACCAGGCAAAGGATAACCTACGTT...GATAAGGCATACTGTCACTGGGAACAGCTGCTCACTCCTTGTGATGCTTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS GCA 90 bp TATACTCTCTGGCTGTGTGGTTCCCCAGAACTGCAGCACCAAATTTaGCCTGCTTTACATATTGACCATTTGTGTATCGATATGCATGGA +
Preference number: 5 (lower is better)
Translates to: YTLWLCGSPELQHQI*PALHIDHLCIDMHG
Trigger: TCCATGCATATCGATACACAAATGGTCAATATGTAAAGCAGGGCAAATTTGGTGCTGCAGTTCTGGGGAACCACACAGCCAGAGAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS GCA 90 bp TTATCAGCCACTTTGCTGACTGCCATTCGAATTTCAGTGTTATGTTaGCGGGCTTCAGTCATGAGAAATGAAGCCATATCACCTGATCCT +
Preference number: 5 (lower is better)
Translates to: LSATLLTAIRISVLC*RASVMRNEAISPDP
Trigger: AGGATCAGGTGATATGGCTTCATTTCTCATGACTGAAGCCCGGCAACATAACACTGAAATTCGAATGGCAGTCAGCAAAGTGGCTGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000446284.6
ENST00000489645.1
CDS-3UTR CAA 90 bp GTGGGACTTTTTCCAGTTTCGAGACTCCCCATGTTAATGAGGCATAGCCTATCCGCCCTGCTTTACATATaGACCATTTGTGTATCGATA +
Preference number: 5 (lower is better)
Translates to: VGLFPVSRLPMLMRHSLSALLYI*TICVSI
Trigger: TATCGATACACAAATGGTCAATATGTAAAGCAGGGC...GGATAGGCTATGCCTCATTAACATGGGGAGTCTCGAAACTGGAAAAAGTCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCGTAACTGGCTGTTGTaGACTGATATAAAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYRNWLL*TDIKKN
Trigger: ATTCTTCTTTATATCAGTCAACAACAGCCAGTTACG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTGGCCATCCTCCCAGCCCTaGATGACTTTTCCTGATCCT +
Preference number: 5 (lower is better)
Translates to: LFLHLIFMTLERRLSFAWPSSQP*MTFPDP
Trigger: AGGATCAGGAAAAGTCATCAAGGGCTGGGAGGATGG...CCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp TTAAACCATACCATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTGATCGAGTCCGTTGCTaGAGTCCAGCCTATTACCCC +
Preference number: 5 (lower is better)
Translates to: LNHTILLNILQNVSLPTFDRVRC*SPAYYP
Trigger: GGGGTAATAGGCTGGACTCAAGCAACGGACTCGATC...AAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAATGGTATGGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAGAGATCAACTTGGCTTaGACTGCATCGGGACTTGTA +
Preference number: 5 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEEINLA*TASGLV
Trigger: TACAAGTCCCGATGCAGTCAAAGCCAAGTTGATCTC...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAACAGCATGCAATACTCTaGCCTGTGTGTTTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEQHAIL*PVCFLW
Trigger: CCACAGAAAACACACAGGCAAGAGTATTGCATGCTG...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAACACCTTGGCCTTCTCTaGTTCAGCATGCAATACTCT +
Preference number: 5 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEHLGLL*FSMQYS
Trigger: AGAGTATTGCATGCTGAACAAGAGAAGGCCAAGGTG...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTCACCTTGAGTTCCAGTaGTTTCCGGTTCTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: IELVVLFISLSEDRVHPSHLEFQ*FPVLLF
Trigger: GAAAAGCAGAACCGGAAACAACTGGAACTCAAGGTG...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAAGTCCTTCTTCCAACTaGCTGCTGAAATCCCAGTGT +
Preference number: 5 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQESPSSN*LLKSQC
Trigger: ACACTGGGATTTCAGCAGCAAGTTGGAAGAAGGACT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTAGTCCTTCTTCCAACTaGCTGCTGAAATCCCAGTGT +
Preference number: 5 (lower is better)
Translates to: IELVVLFISLSEDRVHPSSPSSN*LLKSQC
Trigger: ACACTGGGATTTCAGCAGCAAGTTGGAAGAAGGACT...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCAAAGCCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCCTAGATATGTAACTTaGGGCAAATTACTTTACCTC +
Preference number: 5 (lower is better)
Translates to: PKPARMMPGQMKWNFGSYPRYVT*GKLLYL
Trigger: GAGGTAAAGTAATTTGCCCAAAGTTACATATCTAGG...ATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGGCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 90 bp TCTATCATTCATGCTATCTCAGTGGAGAGGCTTTCTTTGAGCATTTaGCAGCTGTTGAGGGTACAAGCACTCCCTAAAGACAGTAGACAA +
Preference number: 5 (lower is better)
Translates to: SIIHAISVERLSLSI*QLLRVQALPKDSRQ
Trigger: TTGTCTACTGTCTTTAGGGAGTGCTTGTACCCTCAACAGCTGTCAAATGCTCAAAGAAAGCCTCTCCACTGAGATAGCATGAATGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS GCA 90 bp AACCTTAGTCATGAGATGATCCATTTTATCAGCCACTTTGCTGACTaGCATTCGAATTTCAGTGTTATGTTGCCGGGCTTCAGTCATGAG +
Preference number: 5 (lower is better)
Translates to: NLSHEMIHFISHFAD*HSNFSVMLPGFSHE
Trigger: CTCATGACTGAAGCCCGGCAACATAACACTGAAATTCGAATGGCAGTCAGCAAAGTGGCTGATAAAATGGATCATCTCATGACTAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000446284.6
ENST00000489645.1
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTAGCCCTGCTTTACATATaGACCATTTGTGTATCGATA +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLALLYI*TICVSI
Trigger: TATCGATACACAAATGGTCAATATGTAAAGCAGGGC...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp CCTACCCAGAAACTGAAGAAAGTGTATCTTAGGTCACTACCCAGTCATCTGGTGAACCGTAACTGGCTGTaGTTGACTGATATAAAGAAG +
Preference number: 5 (lower is better)
Translates to: PTQKLKKVYLRSLPSHLVNRNWL*LTDIKK
Trigger: CTTCTTTATATCAGTCAACAACAGCCAGTTACGGTT...CACCAGATGACTGGGTAGTGACCTAAGATACACTTTCTTCAGTTTCTGGGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp CCATTGAGTTTAAAGAAGAAGTGCTCACTGAGATTCCAAACCAAATCTGCCAATATCCGAGAGATCAACTaGGCTTTGACTGCATCGGGA +
Preference number: 5 (lower is better)
Translates to: PLSLKKKCSLRFQTKSANIREIN*ALTASG
Trigger: TCCCGATGCAGTCAAAGCCAAGTTGATCTCTCGGAT...ATTGGCAGATTTGGTTTGGAATCTCAGTGAGCACTTCTTCTTTAAACTCAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCATATGCCACAACGTTTaGTGCACATTAACTGACCCA +
Preference number: 5 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPICHNV*CTLTDP
Trigger: TGGGTCAGTTAATGTGCACAAAACGTTGTGGCATAT...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 90 bp ATAAAGAAGAATCCTATACTCTCTGGCTGTGTGGTTCCCCAGAACTaGAGCACCAAATTTGCCCTGCTTTACATATTGACCATTTGTGTA +
Preference number: 5 (lower is better)
Translates to: IKKNPILSGCVVPQN*STKFALLYILTICV
Trigger: TACACAAATGGTCAATATGTAAAGCAGGGCAAATTTGGTGCTGCAGTTCTGGGGAACCACACAGCCAGAGAGTATAGGATTCTTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS-3UTR CAA 90 bp TTAAACCATACCATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTTGGCTGGTGCTGTTTTaGGTGTTGCCTGATTTCCTG +
Preference number: 5 (lower is better)
Translates to: LNHTILLNILQNVSLPTFWLVLF*VLPDFL
Trigger: CAGGAAATCAGGCAACACCAAAAACAGCACCAGCCA...AAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAATGGTATGGTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTACGTAACTGGCTGTTGTaGACTGATATAAAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLRNWLL*TDIKKN
Trigger: ATTCTTCTTTATATCAGTCAACAACAGCCAGTTACG...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp GTTAGCCTGCCAACTTTTAGTAGAAAAGAATACAGAAGAACGCGAATATACACGATGCACACCTGCTTATaGAACTCCACAGCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: VSLPTFSRKEYRRTRIYTMHTCL*NSTAAF
Trigger: AAAGGCTGCTGTGGAGTTCAATAAGCAGGTGTGCAT...CGTGTATATTCGCGTTCTTCTGTATTCTTTTCTACTAAAAGTTGGCAGGCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp CCTGCAAGGATGATGCCAGGCCAGATGAAGTGGAATTTTGGGTCCTATCTTTTATGTATTTATTGCAAGTaGTTCACTGAGGGAGTTAGA +
Preference number: 5 (lower is better)
Translates to: PARMMPGQMKWNFGSYLLCIYCK*FTEGVR
Trigger: TCTAACTCCCTCAGTGAACAACTTGCAATAAATACA...TAAAAGATAGGACCCAAAATTCCACTTCATCTGGCCTGGCATCATCCTTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp ATAGAACTGGTAGTACTCTTTATAAGCCTGTCTGAGGACAGAGTCCATCCATCTGGAATAAGCATGGAATaGCCAGCACTATGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: IELVVLFISLSEDRVHPSGISME*PALCFC
Trigger: ACAGAAACATAGTGCTGGCAATTCCATGCTTATTCC...AGATGGATGGACTCTGTCCTCAGACAGGCTTATAAAGAGTACTACCAGTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 90 bp GATTCGCTGGATGTTGCTCATAATCATGCTTGTTTCCATTGTAACTaGCATGCTAGGAATAAGCATGGAATTGCCAGCACTATGTTTCTG +
Preference number: 5 (lower is better)
Translates to: DSLDVAHNHACFHCN*HARNKHGIASTMFL
Trigger: CAGAAACATAGTGCTGGCAATTCCATGCTTATTCCTAGCATGTCAGTTACAATGGAAACAAGCATGATTATGAGCAACATCCAGCGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000446284.6
ENST00000489645.1
CDS-3UTR CAA 90 bp GGGCTCTACTTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCCGAAGCAACTTATCTTaGTTAGCAGTGGAGTCGAAA +
Preference number: 5 (lower is better)
Translates to: GLYLFLHLIFMTLERRLSRSNLS*LAVESK
Trigger: TTTCGACTCCACTGCTAACAAAGATAAGTTGCTTCG...GGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAAGTAGAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCTGTATTTATTGCAAGTaGTTCACTGAGGGAGTTAGA +
Preference number: 5 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPCIYCK*FTEGVR
Trigger: TCTAACTCCCTCAGTGAACAACTTGCAATAAATACA...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TGCAGCAGGAGAGTTATCTATGTATCCCAGGGGAAACCAGTCACTAAAATCCTATGTATTTATTGCAAGTaGTTCACTGAGGGAGTTAGA +
Preference number: 5 (lower is better)
Translates to: CSRRVIYVSQGKPVTKILCIYCK*FTEGVR
Trigger: TCTAACTCCCTCAGTGAACAACTTGCAATAAATACA...TAGGATTTTAGTGACTGGTTTCCCCTGGGATACATAGATAACTCTCCTGCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp AGAAAGACAGATTATAGATACCCTCATTTTCCCCTTTGCCTAGGATGCCAGGAAATTTTATCAGCCACTTaGCTGACTGCCATTCGAATT +
Preference number: 5 (lower is better)
Translates to: RKTDYRYPHFPLCLGCQEILSAT*LTAIRI
Trigger: AATTCGAATGGCAGTCAGCAAAGTGGCTGATAAAAT...TTCCTGGCATCCTAGGCAAAGGGGAAAATGAGGGTATCTATAATCTGTCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp AAATCAATCGGGTCACGTAACTCAACAGCTTTCTACTCCCTGATATCTACTCCCCCTAGATATGTAACTTaGGGCAAATTACTTTACCTC +
Preference number: 5 (lower is better)
Translates to: KSIGSRNSTAFYSLISTPPRYVT*GKLLYL
Trigger: GAGGTAAAGTAATTTGCCCAAAGTTACATATCTAGG...GGGAGTAGATATCAGGGAGTAGAAAGCTGTTGAGTTACGTGACCCGATTGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS-3UTR CAA 90 bp TTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCTTTGCCTGGAACAGGCTGCTGCCATaGTTTTCTGTGATAACAGGA +
Preference number: 5 (lower is better)
Translates to: LFLHLIFMTLERRLSFAWNRLLP*FSVITG
Trigger: TCCTGTTATCACAGAAAACAATGGCAGCAGCCTGTT...CCAGGCAAAGGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp ATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTAGTAGAAAAGAAGAGATCAACTTGGCTTaGACTGCATCGGGACTTGTA +
Preference number: 5 (lower is better)
Translates to: ILLNILQNVSLPTFSRKEEINLA*TASGLV
Trigger: TACAAGTCCCGATGCAGTCAAAGCCAAGTTGATCTC...TTCTTTTCTACTAAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp GGGCTCTACTTGTTCTTGCATTTAATCTTTATGACACTGGAACGTAGGTTATCCCGTAACTGGCTGTTGTaGACTGATATAAAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: GLYLFLHLIFMTLERRLSRNWLL*TDIKKN
Trigger: ATTCTTCTTTATATCAGTCAACAACAGCCAGTTACG...GGATAACCTACGTTCCAGTGTCATAAAGATTAAATGCAAGAACAAGTAGAGCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp TTAAACCATACCATTCTGCTGAATATACTGCAGAATGTTAGCCTGCCAACTTTTTTACAAACTCTGACTTaGGGGAACTGCTACTGTATG +
Preference number: 5 (lower is better)
Translates to: LNHTILLNILQNVSLPTFLQTLT*GNCYCM
Trigger: CATACAGTAGCAGTTCCCCAAAGTCAGAGTTTGTAA...AAAAGTTGGCAGGCTAACATTCTGCAGTATATTCAGCAGAATGGTATGGTTTAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS-3UTR CAA 90 bp CCATTGAGTTTAAAGAAGAAGTGCTCACTGAGATTCCAAACCAAATCTGCCAATGGGCTCTACTTGTTCTaGCATTTAATCTTTATGACA +
Preference number: 5 (lower is better)
Translates to: PLSLKKKCSLRFQTKSANGLYLF*HLIFMT
Trigger: TGTCATAAAGATTAAATGCAAGAACAAGTAGAGCCC...ATTGGCAGATTTGGTTTGGAATCTCAGTGAGCACTTCTTCTTTAAACTCAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414250.2
CDS GCA 90 bp TTAATGGTTACACTTTCTGTTTGGGAAATGGATAGTAGTGATGGTTaGTCAATCAATACTGTGAATGCAATTAATGGCACTGGATTATGC +
Preference number: 5 (lower is better)
Translates to: LMVTLSVWEMDSSDG*SINTVNAINGTGLC
Trigger: GCATAATCCAGTGCCATTAATTGCATTCACAGTATTGATTGAGCAACCATCACTACTATCCATTTCCCAAACAGAAAGTGTAACCATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493847.1
CDS CCA 72 bp CGGTGTCGTCCTCGTCCCCCGCACCGAACATTGCGTTaGCTTTCACCGGGTTGCGGGGAGGAAGCTGGGTAT +
Preference number: 6 (lower is better)
Translates to: RCRPRPPHRTLR*LSPGCGEEAGY
Trigger: ATACCCAGCTTCCTCCCCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGGGACGAGGACGACACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414250.2
ENST00000446284.6
CDS CAA 72 bp TCGGTGTCGTCCTCGTCCCCCGCACCGAACATTGCGTaGGCTTTCACCGGGTTGCGGGGAGGAAGCTGGGTA +
Preference number: 6 (lower is better)
Translates to: SVSSSSPAPNIA*AFTGLRGGSWV
Trigger: TACCCAGCTTCCTCCCCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGGGACGAGGACGACACCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414250.2
ENST00000446284.6
CDS CAA 90 bp TCGTCCTCGTCCCCCGCACCGAACATTGCGTTGGCTTTCACCGGGTaGCGGGGAGGAAGCTGGGTATTCCCAGAGTCCCAGGGCCTGTCA +
Preference number: 6 (lower is better)
Translates to: SSSSPAPNIALAFTG*RGGSWVFPESQGLS
Trigger: TGACAGGCCCTGGGACTCTGGGAATACCCAGCTTCCTCCCCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGGGACGAGGACGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414250.2
ENST00000446284.6
CDS CAA 90 bp TCGGCGAGAGGAAATCGGTGTCGTCCTCGTCCCCCGCACCGAACATaGCGTTGGCTTTCACCGGGTTGCGGGGAGGAAGCTGGGTATTCC +
Preference number: 6 (lower is better)
Translates to: SARGNRCRPRPPHRT*RWLSPGCGEEAGYS
Trigger: GGAATACCCAGCTTCCTCCCCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGGGACGAGGACGACACCGATTTCCTCTCGCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414250.2
ENST00000446284.6
CDS GCA 72 bp GAAATCGGTGTCGTCCTCGTCCCCCGCACCGAACATTaGGTTGGCTTTCACCGGGTTGCGGGGAGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: EIGVVLVPRTEH*VGFHRVAGRKL
Trigger: CAGCTTCCTCCCCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGGGACGAGGACGACACCGATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414250.2
ENST00000446284.6
ENST00000462889.1
CDS CAA 72 bp GGAAATCGGTGTCGTCCTCGTCCCCCGCACCGAACATaGCGTTGGCTTTCACCGGGTTGCGGGGAGGAAGCT +
Preference number: 6 (lower is better)
Translates to: GNRCRPRPPHRT*RWLSPGCGEEA
Trigger: AGCTTCCTCCCCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGGGACGAGGACGACACCGATTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414250.2
ENST00000446284.6
ENST00000462889.1
CDS CAA 90 bp GAGAGGAAATCGGTGTCGTCCTCGTCCCCCGCACCGAACATTGCGTaGGCTTTCACCGGGTTGCGGGGAGGAAGCTGGGTATTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: ERKSVSSSSPAPNIA*AFTGLRGGSWVFPE
Trigger: CTCTGGGAATACCCAGCTTCCTCCCCGCAACCCGGTGAAAGCCAACGCAATGTTCGGTGCGGGGGACGAGGACGACACCGATTTCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414250.2
ENST00000446284.6
CDS TCA 72 bp TGTGAGGTCATCTGTGGTAACGCTGGATGGGCCGGATaGAGAGAGGGCTGGACGGACGGAGTCACCACAGGC +
Preference number: 6 (lower is better)
Translates to: CEVICGNAGWAG*REGWTDGVTTG
Trigger: GCCTGTGGTGACTCCGTCCGTCCAGCCCTCTCTTCATCCGGCCCATCCAGCGTTACCACAGATGACCTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000489645.1
CDS TCA 72 bp GGCTGCTCCTGCAACTGTGGAACCTGCCTCTGTGCTTaGCAGCTCCTTGTGGGGACCGGTGGAGCTAGTGAC +
Preference number: 6 (lower is better)
Translates to: GCSCNCGTCLCA*QLLVGTGGASD
Trigger: GTCACTAGCTCCACCGGTCCCCACAAGGAGCTGTCAAGCACAGAGGCAGGTTCCACAGTTGCAGGAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 72 bp AGTCCCCTTTCCTTCTGTGTCCATCCTGGGAAGTGGTaGGGGCCTGAGGAGGCAACGGGACAGCTTCCTCGA +
Preference number: 6 (lower is better)
Translates to: SPLSFCVHPGKW*GPEEATGQLPR
Trigger: TCGAGGAAGCTGTCCCGTTGCCTCCTCAGGCCCTCACCACTTCCCAGGATGGACACAGAAGGAAAGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 72 bp CAGAGAGACTGGAACGCTGGGAATGATGGCTGGGTCTaGGGGCTGCTCCTGCAACTGTGGAACCTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: QRDWNAGNDGWV*GLLLQLWNLPL
Trigger: CAGAGGCAGGTTCCACAGTTGCAGGAGCAGCCCTCAGACCCAGCCATCATTCCCAGCGTTCCAGTCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 90 bp GGGCCATCTGGTGCTACTTCCCTGACACAGACCTTTCCTGATGGGTaGTCGGGCTTAGCTGCCATTGGGCTGGCAGCAAGTGACTCCTCA +
Preference number: 6 (lower is better)
Translates to: GPSGATSLTQTFPDG*SGLAAIGLAASDSS
Trigger: TGAGGAGTCACTTGCTGCCAGCCCAATGGCAGCTAAGCCCGACAACCCATCAGGAAAGGTCTGTGTCAGGGAAGTAGCACCAGATGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 72 bp GCCATCTGGTGCTACTTCCCTGACACAGACCTTTCCTaGTGGGTTGTCGGGCTTAGCTGCCATTGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: AIWCYFPDTDLS*WVVGLSCHWAG
Trigger: GCCAGCCCAATGGCAGCTAAGCCCGACAACCCATCAGGAAAGGTCTGTGTCAGGGAAGTAGCACCAGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 72 bp AGTCCATGGATACAGGGCCTAGGGGCTCAGGTGGAATaGAAGTCGGGGGCCCTAGAACTCTGTGGGATGGGA +
Preference number: 6 (lower is better)
Translates to: SPWIQGLGAQVE*KSGALELCGMG
Trigger: TCCCATCCCACAGAGTTCTAGGGCCCCCGACTTCAATTCCACCTGAGCCCCTAGGCCCTGTATCCATGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 72 bp GGTCCCCCTCCTCGGGGTCTGAAGTCAGGGACAGTCTaGTGGAGCTTTCTTGTAGTGGGCCATCTGGTGCTA +
Preference number: 6 (lower is better)
Translates to: GPPPRGLKSGTV*WSFLVVGHLVL
Trigger: TAGCACCAGATGGCCCACTACAAGAAAGCTCCACAAGACTGTCCCTGACTTCAGACCCCGAGGAGGGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 72 bp AATCTCCAACTTCTACAGCAGGGCCGTCTGCCACAATaGGGTCCTGGGAGAGCACTGCATCCAGGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: NLQLLQQGRLPQ*GPGRALHPGKR
Trigger: CCTCTTCCCTGGATGCAGTGCTCTCCCAGGACCTCATTGTGGCAGACGGCCCTGCTGTAGAAGTTGGAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CCA 72 bp GGCTGGCAGCAAGTGACTCCTCACACTCAGAGTCCATaGATACAGGGCCTAGGGGCTCAGGTGGAATTGAAG +
Preference number: 6 (lower is better)
Translates to: GWQQVTPHTQSP*IQGLGAQVELK
Trigger: CTTCAATTCCACCTGAGCCCCTAGGCCCTGTATCCATGGACTCTGAGTGTGAGGAGTCACTTGCTGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CCA 72 bp CCCCCTCCTCGGGGTCTGAAGTCAGGGACAGTCTTGTaGAGCTTTCTTGTAGTGGGCCATCTGGTGCTACTT +
Preference number: 6 (lower is better)
Translates to: PPPRGLKSGTVL*SFLVVGHLVLL
Trigger: AAGTAGCACCAGATGGCCCACTACAAGAAAGCTCCACAAGACTGTCCCTGACTTCAGACCCCGAGGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 72 bp GATGTGGGTGGTGACACAACAGGATCAGCAGAGAGGTaGTCAGCACCAGGGATGGGAGACGGAGCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: DVGGDTTGSAER*SAPGMGDGAAE
Trigger: TTCTGCAGCTCCGTCTCCCATCCCTGGTGCTGACAACCTCTCTGCTGATCCTGTTGTGTCACCACCCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CAA 72 bp GGTGCTACTTCCCTGACACAGACCTTTCCTGATGGGTaGTCGGGCTTAGCTGCCATTGGGCTGGCAGCAAGT +
Preference number: 6 (lower is better)
Translates to: GATSLTQTFPDG*SGLAAIGLAAS
Trigger: ACTTGCTGCCAGCCCAATGGCAGCTAAGCCCGACAACCCATCAGGAAAGGTCTGTGTCAGGGAAGTAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 90 bp GCTGCTCCTGCAACTGTGGAACCTGCCTCTGTGCTTGACAGCTCCTaGTGGGGACCGGTGGAGCTAGTGACATCATCTTTCTTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: AAPATVEPASVLDSS*WGPVELVTSSFLSC
Trigger: ACAGCTCAAGAAAGATGATGTCACTAGCTCCACCGGTCCCCACAAGGAGCTGTCAAGCACAGAGGCAGGTTCCACAGTTGCAGGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 72 bp ACCTCCACCTCGAACACCAGGATCGAGTCCGTTGCTTaGGTCCAGCCTATTACCCCTTCTGAGCCAACAGCA +
Preference number: 6 (lower is better)
Translates to: TSTSNTRIESVA*VQPITPSEPTA
Trigger: TGCTGTTGGCTCAGAAGGGGTAATAGGCTGGACTCAAGCAACGGACTCGATCCTGGTGTTCGAGGTGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS GCA 72 bp AGAGAGGTTGTCAGCACCAGGGATGGGAGACGGAGCTaGAGAATCGCGGGAACTAACACTGTGACCATCAGA +
Preference number: 6 (lower is better)
Translates to: REVVSTRDGRRS*RIAGTNTVTIR
Trigger: TCTGATGGTCACAGTGTTAGTTCCCGCGATTCTGCAGCTCCGTCTCCCATCCCTGGTGCTGACAACCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS GCA 72 bp TCTCTCTGTGCGCACACCTCCTGGTACTGCTGCAGGTaGTCATCCTTGGCGGAGGCCAACAAATGTTCACAT +
Preference number: 6 (lower is better)
Translates to: SLCAHTSWYCCR*SSLAEANKCSH
Trigger: ATGTGAACATTTGTTGGCCTCCGCCAAGGATGAGCACCTGCAGCAGTACCAGGAGGTGTGCGCACAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 72 bp CATGCTCACCTCGTCTTCATCCTCCTCCTCAGGCTGTaGTTTGGGCCTCAGAGCTTTCAGAGTTGCCCCTTT +
Preference number: 6 (lower is better)
Translates to: HAHLVFILLLRL*FGPQSFQSCPF
Trigger: AAAGGGGCAACTCTGAAAGCTCTGAGGCCCAAAGCACAGCCTGAGGAGGAGGATGAAGACGAGGTGAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CCA 72 bp GAATCCAGCTGTGGTGGAAGGATGGGCAGCATGGGCTaGCCCATTTTAGCCATCCGAGAGATCAACTTGGCT +
Preference number: 6 (lower is better)
Translates to: ESSCGGRMGSMG*PILAIREINLA
Trigger: AGCCAAGTTGATCTCTCGGATGGCTAAAATGGGCCAGCCCATGCTGCCCATCCTTCCACCACAGCTGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CCA 72 bp TCAGGTGGAATTGAAGTCGGGGGCCCTAGAACTCTGTaGGATGGGATGCAAGACAGTTCGGGTGGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: SGGIEVGGPRTL*DGMQDSSGGRE
Trigger: TTCCCTTCCACCCGAACTGTCTTGCATCCCATCCCACAGAGTTCTAGGGCCCCCGACTTCAATTCCACCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CCA 72 bp ATGAGATGTGGGAGCACTCTCACCTCTCTGGCTGTGTaGTTCCCCAGAACTGCAGCACCAAATTTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: MRCGSTLTSLAV*FPRTAAPNLPC
Trigger: GCAGGGCAAATTTGGTGCTGCAGTTCTGGGGAACCACACAGCCAGAGAGGTGAGAGTGCTCCCACATCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493847.1
CDS CAA 72 bp GGAGGTGACGGCAGATGCCTGGGGATAAGCGTAGGCTaGCATACCTGCATAGGGCTGAAAGGATTGGGCATT +
Preference number: 6 (lower is better)
Translates to: GGDGRCLGISVG*HTCIGLKGLGI
Trigger: AATGCCCAATCCTTTCAGCCCTATGCAGGTATGCAAGCCTACGCTTATCCCCAGGCATCTGCCGTCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000446284.6
ENST00000489645.1
CDS CAA 72 bp GCAACTGTGGAACCTGCCTCTGTGCTTGACAGCTCCTaGTGGGGACCGGTGGAGCTAGTGACATCATCTTTC +
Preference number: 6 (lower is better)
Translates to: ATVEPASVLDSS*WGPVELVTSSF
Trigger: GAAAGATGATGTCACTAGCTCCACCGGTCCCCACAAGGAGCTGTCAAGCACAGAGGCAGGTTCCACAGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 90 bp AAAGGTATTGATGTGGGTGGTGACACAACAGGATCAGCAGAGAGGTaGTCAGCACCAGGGATGGGAGACGGAGCTGCAGAATCGCGGGAA +
Preference number: 6 (lower is better)
Translates to: KGIDVGGDTTGSAER*SAPGMGDGAAESRE
Trigger: TTCCCGCGATTCTGCAGCTCCGTCTCCCATCCCTGGTGCTGACAACCTCTCTGCTGATCCTGTTGTGTCACCACCCACATCAATACCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CAA 90 bp TGCCCACCTCCTTGCAGAGTGTTCACATCTTCGATTTCTGAATCATaGGAATCCAGCTGTGGTGGAAGGATGGGCAGCATGGGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: CPPPCRVFTSSISES*ESSCGGRMGSMGWP
Trigger: GGGCCAGCCCATGCTGCCCATCCTTCCACCACAGCTGGATTCCAATGATTCAGAAATCGAAGATGTGAACACTCTGCAAGGAGGTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS TCA 72 bp CGAGTCCGTTGCTTGAGTCCAGCCTATTACCCCTTCTaGGCCAACAGCACAGGCTGGAGGGACAATAAGCAA +
Preference number: 6 (lower is better)
Translates to: RVRCLSPAYYPF*ANSTGWRDNKQ
Trigger: TTGCTTATTGTCCCTCCAGCCTGTGCTGTTGGCTCAGAAGGGGTAATAGGCTGGACTCAAGCAACGGACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS TCA 72 bp GGAGACGGAGCTGCAGAATCGCGGGAACTAACACTGTaGCCATCAGAGCCAGAATCTCTGGCAAACTTCACC +
Preference number: 6 (lower is better)
Translates to: GDGAAESRELTL*PSEPESLANFT
Trigger: GGTGAAGTTTGCCAGAGATTCTGGCTCTGATGGTCACAGTGTTAGTTCCCGCGATTCTGCAGCTCCGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CCA 72 bp CAGTCATTTTCAGCTGCAGATGAGAGACCTGTGCAGTaGCCGCTGCTAACTCCTCTGTCACCTTGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: QSFSAADERPVQ*PLLTPLSPWPS
Trigger: AGAAGGCCAAGGTGACAGAGGAGTTAGCAGCGGCCACTGCACAGGTCTCTCATCTGCAGCTGAAAATGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CCA 72 bp ACTGTGGAACCTGCCTCTGTGCTTGACAGCTCCTTGTaGGGACCGGTGGAGCTAGTGACATCATCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: TVEPASVLDSSL*GPVELVTSSFL
Trigger: CAAGAAAGATGATGTCACTAGCTCCACCGGTCCCCACAAGGAGCTGTCAAGCACAGAGGCAGGTTCCACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 72 bp ACAGGCTGCCCACCTCCTTGCAGAGTGTTCACATCCTaGAACAGGAACAAGCGTTTGGGTTACTCTGTACGG +
Preference number: 6 (lower is better)
Translates to: TGCPPPCRVFTS*NRNKRLGYSVR
Trigger: CCGTACAGAGTAACCCAAACGCTTGTTCCTGTTTCAGGATGTGAACACTCTGCAAGGAGGTGGGCAGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489645.1
CDS GCA 72 bp ATGCATGGACTGCTGTTGCGACCAGTATTGTGGGAGTaGTCATGGTGGCTGGTGCTGTTTTTGGTGTTGCCT +
Preference number: 6 (lower is better)
Translates to: MHGLLLRPVLWE*SWWLVLFLVLP
Trigger: AGGCAACACCAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000462889.1
ENST00000493847.1
CDS GCA 72 bp CCAGATACAGCTGAGTGGGAATCGAGAGATGACACTTaGATTAAGGCAGCAGAAGGTGCCTGGAGCCCAGTA +
Preference number: 6 (lower is better)
Translates to: PDTAEWESRDDT*IKAAEGAWSPV
Trigger: TACTGGGCTCCAGGCACCTTCTGCTGCCTTAATGCAAGTGTCATCTCTCGATTCCCACTCAGCTGTATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000489645.1
CDS GCA 72 bp CTCAGCGACTTACTATCGATATGCATGGACTGCTGTTaGGACCAGTATTGTGGGAGTGCTCATGGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: LSDLLSICMDCC*DQYCGSAHGGW
Trigger: CCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGTAAGTCGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS CCA 72 bp CTGCTGTTGCGACCAGTATTGTGGGAGTGCTCATGGTaGCTGGTGCTGTTTTTGGTGTTGCCTGATTTCCTG +
Preference number: 6 (lower is better)
Translates to: LLLRPVLWECSW*LVLFLVLPDFL
Trigger: CAGGAAATCAGGCAACACCAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000462889.1
CDS CAA 90 bp GCTGCAGGTGCTCATCCTTGGCGGAGGCCAACAAATGTTCACATTTaGCTTCCCACTGGGTCTGTAGCTCAGCCTGTACTAAAGACAGCT +
Preference number: 6 (lower is better)
Translates to: AAGAHPWRRPTNVHI*LPTGSVAQPVLKTA
Trigger: AGCTGTCTTTAGTACAGGCTGAGCTACAGACCCAGTGGGAAGCAAAATGTGAACATTTGTTGGCCTCCGCCAAGGATGAGCACCTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 90 bp CAGCGACTTACTATCGATATGCATGGACTGCTGTTGCGACCAGTATaGTGGGAGTGCTCATGGTGGCTGGTGCTGTTTTTGGTGTTGCCT +
Preference number: 6 (lower is better)
Translates to: QRLTIDMHGLLLRPV*WECSWWLVLFLVLP
Trigger: AGGCAACACCAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGTAAGTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS CAA 90 bp GGTGTTCCTTCTCAGCGACTTACTATCGATATGCATGGACTGCTGTaGCGACCAGTATTGTGGGAGTGCTCATGGTGGCTGGTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: GVPSQRLTIDMHGLL*RPVLWECSWWLVLF
Trigger: AAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGTAAGTCGCTGAGAAGGAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS CCA 72 bp ATCGATATGCATGGACTGCTGTTGCGACCAGTATTGTaGGAGTGCTCATGGTGGCTGGTGCTGTTTTTGGTG +
Preference number: 6 (lower is better)
Translates to: IDMHGLLLRPVL*ECSWWLVLFLV
Trigger: CACCAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000462889.1
ENST00000493847.1
CDS CCA 72 bp GGGAAGGGTTGCAGAGAAACCTTTGCACCAGTTTCCTaGGTCTTCATCCCAGCCAGTCAATGTCATCGTCAT +
Preference number: 6 (lower is better)
Translates to: GKGCRETFAPVS*VFIPASQCHRH
Trigger: ATGACGATGACATTGACTGGCTGGGATGAAGACCCAGGAAACTGGTGCAAAGGTTTCTCTGCAACCCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CCA 72 bp GGGTGTTCCTTCTCAGCGACTTACTATCGATATGCATaGACTGCTGTTGCGACCAGTATTGTGGGAGTGCTC +
Preference number: 6 (lower is better)
Translates to: GCSFSATYYRYA*TAVATSIVGVL
Trigger: GAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGTAAGTCGCTGAGAAGGAACACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS CAA 72 bp TCCTGGGAGAGCACTGCATCCAGGGAAGAGGTACTGTaGCACTTAGCAATGCACACCTGCTTATTGAACTCC +
Preference number: 6 (lower is better)
Translates to: SWESTASREEVL*HLAMHTCLLNS
Trigger: GGAGTTCAATAAGCAGGTGTGCATTGCTAAGTGCAACAGTACCTCTTCCCTGGATGCAGTGCTCTCCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CAA 72 bp TCTCAGCGACTTACTATCGATATGCATGGACTGCTGTaGCGACCAGTATTGTGGGAGTGCTCATGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: SQRLTIDMHGLL*RPVLWECSWWL
Trigger: CAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGTAAGTCGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS CAA 90 bp GACCATTTGTGTATCGATATGCATGGACTGCTGTTGCGACCAGTATaGTGGGAGTGCTCATGGTGGCTGGTGCTGTTTTTGGTGTTGCCT +
Preference number: 6 (lower is better)
Translates to: DHLCIDMHGLLLRPV*WECSWWLVLFLVLP
Trigger: AGGCAACACCAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATACACAAATGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000493847.1
CDS TCA 72 bp TACTGGAAAAATTCATTTCCATGGCCAGCAGCTGCCTaGTCCAGTCCAAAAAGTGAGGCCAATCTGGCACCG +
Preference number: 6 (lower is better)
Translates to: YWKNSFPWPAAA*SSPKSEANLAP
Trigger: CGGTGCCAGATTGGCCTCACTTTTTGGACTGGATCAGGCAGCTGCTGGCCATGGAAATGAATTTTTCCAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000462889.1
CDS GCA 72 bp TTGACCATTTGTGTATCGATATGCATGGACTGCTGTTaGGACCAGTATTGTGGGAGTGCTCATGGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: LTICVSICMDCC*DQYCGSAHGGW
Trigger: CCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATACACAAATGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000493847.1
CDS GCA 72 bp CAGAGGGTGTTCCTTCTCAGCGACTTACTATCGATATaGATGGACTGCTGTTGCGACCAGTATTGTGGGAGT +
Preference number: 6 (lower is better)
Translates to: QRVFLLSDLLSI*MDCCCDQYCGS
Trigger: ACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGTAAGTCGCTGAGAAGGAACACCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS CCA 72 bp TCAGCCTGTACTAAAGACAGCTGCTCTGCAGCTGCTTaGTCTGTGGACACTCGAGTCTTTTTCAAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: SACTKDSCSAAA*SVDTRVFFKSC
Trigger: ACAGCTCTTGAAAAAGACTCGAGTGTCCACAGACCAAGCAGCTGCAGAGCAGCTGTCTTTAGTACAGGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CCA 72 bp TCCAGCTCAAACTCTCTCCGTAAGGACTGGAACACCTaGTTCATGATCTTCTTGACCTTCTCTGAGGGGTCA +
Preference number: 6 (lower is better)
Translates to: SSSNSLRKDWNT*FMIFLTFSEGS
Trigger: TGACCCCTCAGAGAAGGTCAAGAAGATCATGAACCAGGTGTTCCAGTCCTTACGGAGAGAGTTTGAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 72 bp TGTATCGATATGCATGGACTGCTGTTGCGACCAGTATaGTGGGAGTGCTCATGGTGGCTGGTGCTGTTTTTG +
Preference number: 6 (lower is better)
Translates to: CIDMHGLLLRPV*WECSWWLVLFL
Trigger: CAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000493847.1
CDS CAA 72 bp ACTATCGATATGCATGGACTGCTGTTGCGACCAGTATaGTGGGAGTGCTCATGGTGGCTGGTGCTGTTTTTG +
Preference number: 6 (lower is better)
Translates to: TIDMHGLLLRPV*WECSWWLVLFL
Trigger: CAAAAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS TCA 72 bp CAAGAGCTGTCGAAGTTTGTCCAATTCCTCCTGGTATaGCTTGCGAATTTCATCTATCTCCTCCTCGGCCTG +
Preference number: 6 (lower is better)
Translates to: QELSKFVQFLLV*LANFIYLLLGL
Trigger: CAGGCCGAGGAGGAGATAGATGAAATTCGCAAGTCATACCAGGAGGAATTGGACAAACTTCGACAGCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 72 bp GCTGTCGAAGTTTGTCCAATTCCTCCTGGTATGACTTaGGAATTTCATCTATCTCCTCCTCGGCCTGAGAAC +
Preference number: 6 (lower is better)
Translates to: AVEVCPIPPGMT*EFHLSPPRPEN
Trigger: GTTCTCAGGCCGAGGAGGAGATAGATGAAATTCGCAAGTCATACCAGGAGGAATTGGACAAACTTCGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 72 bp AAAATCATGCTTAGGGAAGGGTTGCAGAGAAACCTTTaGACCAGTTTCCTGGGTCTTCATCCCAGCCAGTCA +
Preference number: 6 (lower is better)
Translates to: KIMLREGLQRNL*TSFLGLHPSQS
Trigger: TGACTGGCTGGGATGAAGACCCAGGAAACTGGTGCAAAGGTTTCTCTGCAACCCTTCCCTAAGCATGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 72 bp TTCCTTCTCAGCGACTTACTATCGATATGCATGGACTaGTGTTGCGACCAGTATTGTGGGAGTGCTCATGGT +
Preference number: 6 (lower is better)
Translates to: FLLSDLLSICMD*CCDQYCGSAHG
Trigger: ACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATAGTAAGTCGCTGAGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS CCA 72 bp CTTGCAGAGTGTTCACATCTTCGATTTCTGAATCATTaGAATCCAGCTGTGGTGGAAGGATGGGCAGCATGG +
Preference number: 6 (lower is better)
Translates to: LAECSHLRFLNH*NPAVVEGWAAW
Trigger: CCATGCTGCCCATCCTTCCACCACAGCTGGATTCCAATGATTCAGAAATCGAAGATGTGAACACTCTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CCA 72 bp GTACTAAAGACAGCTGCTCTGCAGCTGCTTGGTCTGTaGACACTCGAGTCTTTTTCAAGAGCTGTCGAAGTT +
Preference number: 6 (lower is better)
Translates to: VLKTAALQLLGL*TLESFSRAVEV
Trigger: AACTTCGACAGCTCTTGAAAAAGACTCGAGTGTCCACAGACCAAGCAGCTGCAGAGCAGCTGTCTTTAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 72 bp ATTGACCATTTGTGTATCGATATGCATGGACTGCTGTaGCGACCAGTATTGTGGGAGTGCTCATGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: IDHLCIDMHGLL*RPVLWECSWWL
Trigger: CAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATACACAAATGGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000493847.1
CDS CAA 72 bp CCTTGCAGAGTGTTCACATCTTCGATTTCTGAATCATaGGAATCCAGCTGTGGTGGAAGGATGGGCAGCATG +
Preference number: 6 (lower is better)
Translates to: PCRVFTSSISES*ESSCGGRMGSM
Trigger: CATGCTGCCCATCCTTCCACCACAGCTGGATTCCAATGATTCAGAAATCGAAGATGTGAACACTCTGCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CAA 90 bp ATGGGCAGCATGGGCTGGCCCATTTTAGCCATCCGAGAGATCAACTaGGCTTTGACTGCATCGGGACTTGTATTTATTGCAAGTTGTTCA +
Preference number: 6 (lower is better)
Translates to: MGSMGWPILAIREIN*ALTASGLVFIASCS
Trigger: TGAACAACTTGCAATAAATACAAGTCCCGATGCAGTCAAAGCCAAGTTGATCTCTCGGATGGCTAAAATGGGCCAGCCCATGCTGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CAA 90 bp GCTTTACATATTGACCATTTGTGTATCGATATGCATGGACTGCTGTaGCGACCAGTATTGTGGGAGTGCTCATGGTGGCTGGTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: ALHIDHLCIDMHGLL*RPVLWECSWWLVLF
Trigger: AAACAGCACCAGCCACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATACACAAATGGTCAATATGTAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000493847.1
CDS CAA 90 bp AAGGTCAGTCAGTTCCTCCTCCAGGGATGTCACCTTGAGTTCCAGTaGTTTCCGGTTCTGCTTTTCACTTTTGAATTTGGACTGTGCTTG +
Preference number: 6 (lower is better)
Translates to: KVSQFLLQGCHLEFQ*FPVLLFTFEFGLCL
Trigger: CAAGCACAGTCCAAATTCAAAAGTGAAAAGCAGAACCGGAAACAACTGGAACTCAAGGTGACATCCCTGGAGGAGGAACTGACTGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 72 bp CATGCTATCTCAGTGGAGAGGCTTTCTTTGAGCATTTaGCAGCTGTTGAGGGTACAAGCACTCCCTAAAGAC +
Preference number: 6 (lower is better)
Translates to: HAISVERLSLSI*QLLRVQALPKD
Trigger: GTCTTTAGGGAGTGCTTGTACCCTCAACAGCTGTCAAATGCTCAAAGAAAGCCTCTCCACTGAGATAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS GCA 72 bp AATCCTATACTCTCTGGCTGTGTGGTTCCCCAGAACTaGAGCACCAAATTTGCCCTGCTTTACATATTGACC +
Preference number: 6 (lower is better)
Translates to: NPILSGCVVPQN*STKFALLYILT
Trigger: GGTCAATATGTAAAGCAGGGCAAATTTGGTGCTGCAGTTCTGGGGAACCACACAGCCAGAGAGTATAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS GCA 72 bp GTGGCCGCTCTTCTGCTTTTTCTTCTTCTTCTTCACTaGTGCTCTCTTCCTTCTCTTGCTCCTGTTGGTTTA +
Preference number: 6 (lower is better)
Translates to: VAALLLFLLLLH*CSLPSLAPVGL
Trigger: TAAACCAACAGGAGCAAGAGAAGGAAGAGAGCAGCAGTGAAGAAGAAGAAGAAAAAGCAGAAGAGCGGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CCA 72 bp TGGTATTATTTGGGACATCTGAATATACATGAGATGTaGGAGCACTCTCACCTCTCTGGCTGTGTGGTTCCC +
Preference number: 6 (lower is better)
Translates to: WYYLGHLNIHEM*EHSHLSGCVVP
Trigger: GGGAACCACACAGCCAGAGAGGTGAGAGTGCTCCCACATCTCATGTATATTCAGATGTCCCAAATAATACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493847.1
CDS CAA 72 bp ATGGGCTGGCCCATTTTAGCCATCCGAGAGATCAACTaGGCTTTGACTGCATCGGGACTTGTATTTATTGCA +
Preference number: 6 (lower is better)
Translates to: MGWPILAIREIN*ALTASGLVFIA
Trigger: TGCAATAAATACAAGTCCCGATGCAGTCAAAGCCAAGTTGATCTCTCGGATGGCTAAAATGGGCCAGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CAA 90 bp GATGTCACCTTGAGTTCCAGTTGTTTCCGGTTCTGCTTTTCACTTTaGAATTTGGACTGTGCTTGCTCAGAGGTTTCTTGGAGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: DVTLSSSCFRFCFSL*NLDCACSEVSWSSE
Trigger: CTCAGAGCTCCAAGAAACCTCTGAGCAAGCACAGTCCAAATTCAAAAGTGAAAAGCAGAACCGGAAACAACTGGAACTCAAGGTGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 90 bp TTCTCAACTCGAAGGTCAGTCAGTTCCTCCTCCAGGGATGTCACCTaGAGTTCCAGTTGTTTCCGGTTCTGCTTTTCACTTTTGAATTTG +
Preference number: 6 (lower is better)
Translates to: FSTRRSVSSSSRDVT*SSSCFRFCFSLLNL
Trigger: CAAATTCAAAAGTGAAAAGCAGAACCGGAAACAACTGGAACTCAAGGTGACATCCCTGGAGGAGGAACTGACTGACCTTCGAGTTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 90 bp GCTTGGTCTGTGGACACTCGAGTCTTTTTCAAGAGCTGTCGAAGTTaGTCCAATTCCTCCTGGTATGACTTGCGAATTTCATCTATCTCC +
Preference number: 6 (lower is better)
Translates to: AWSVDTRVFFKSCRS*SNSSWYDLRISSIS
Trigger: GGAGATAGATGAAATTCGCAAGTCATACCAGGAGGAATTGGACAAACTTCGACAGCTCTTGAAAAAGACTCGAGTGTCCACAGACCAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 72 bp TGGCTGTGTGGTTCCCCAGAACTGCAGCACCAAATTTaGCCTGCTTTACATATTGACCATTTGTGTATCGAT +
Preference number: 6 (lower is better)
Translates to: WLCGSPELQHQI*PALHIDHLCID
Trigger: ATCGATACACAAATGGTCAATATGTAAAGCAGGGCAAATTTGGTGCTGCAGTTCTGGGGAACCACACAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000493847.1
CDS GCA 72 bp GCCGCTCTTCTGCTTTTTCTTCTTCTTCTTCACTGCTaGTCTCTTCCTTCTCTTGCTCCTGTTGGTTTAACA +
Preference number: 6 (lower is better)
Translates to: AALLLFLLLLHC*SLPSLAPVGLT
Trigger: TGTTAAACCAACAGGAGCAAGAGAAGGAAGAGAGCAGCAGTGAAGAAGAAGAAGAAAAAGCAGAAGAGCGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 72 bp TTTCCTGATCCTAACTTCAAGCGAAGCAACTTATCTTaGTTAGCAGTGGAGTCGAAAACCTGGCCCAGCACA +
Preference number: 6 (lower is better)
Translates to: FPDPNFKRSNLS*LAVESKTWPST
Trigger: TGTGCTGGGCCAGGTTTTCGACTCCACTGCTAACAAAGATAAGTTGCTTCGCTTGAAGTTAGGATCAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS GCA 72 bp TACATATTGACCATTTGTGTATCGATATGCATGGACTaGTGTTGCGACCAGTATTGTGGGAGTGCTCATGGT +
Preference number: 6 (lower is better)
Translates to: YILTICVSICMD*CCDQYCGSAHG
Trigger: ACCATGAGCACTCCCACAATACTGGTCGCAACAGCAGTCCATGCATATCGATACACAAATGGTCAATATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
ENST00000493847.1
CDS GCA 72 bp AGGGATGTCACCTTGAGTTCCAGTTGTTTCCGGTTCTaGTTTTCACTTTTGAATTTGGACTGTGCTTGCTCA +
Preference number: 6 (lower is better)
Translates to: RDVTLSSSCFRF*FSLLNLDCACS
Trigger: TGAGCAAGCACAGTCCAAATTCAAAAGTGAAAAGCAGAACCGGAAACAACTGGAACTCAAGGTGACATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 72 bp GGCTTTGACTGCATCGGGACTTGTATTTATTGCAAGTaGTTCACTGAGGGAGTTAGATTTGGTACGAAGAGC +
Preference number: 6 (lower is better)
Translates to: GFDCIGTCIYCK*FTEGVRFGTKS
Trigger: GCTCTTCGTACCAAATCTAACTCCCTCAGTGAACAACTTGCAATAAATACAAGTCCCGATGCAGTCAAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CAA 72 bp TGGCCCATTTTAGCCATCCGAGAGATCAACTTGGCTTaGACTGCATCGGGACTTGTATTTATTGCAAGTTGT +
Preference number: 6 (lower is better)
Translates to: WPILAIREINLA*TASGLVFIASC
Trigger: ACAACTTGCAATAAATACAAGTCCCGATGCAGTCAAAGCCAAGTTGATCTCTCGGATGGCTAAAATGGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CAA 72 bp GTGGACACTCGAGTCTTTTTCAAGAGCTGTCGAAGTTaGTCCAATTCCTCCTGGTATGACTTGCGAATTTCA +
Preference number: 6 (lower is better)
Translates to: VDTRVFFKSCRS*SNSSWYDLRIS
Trigger: TGAAATTCGCAAGTCATACCAGGAGGAATTGGACAAACTTCGACAGCTCTTGAAAAAGACTCGAGTGTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS TCA 72 bp CTCTCTTCCTTCTCTTGCTCCTGTTGGTTTAACAGCTaGAGAGTCACCATCTTGATCGTATTCATGATGGTT +
Preference number: 6 (lower is better)
Translates to: LSSFSCSCWFNS*RVTILIVFMMV
Trigger: AACCATCATGAATACGATCAAGATGGTGACTCTTCAGCTGTTAAACCAACAGGAGCAAGAGAAGGAAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS GCA 72 bp ACTTTGCTGACTGCCATTCGAATTTCAGTGTTATGTTaGCGGGCTTCAGTCATGAGAAATGAAGCCATATCA +
Preference number: 6 (lower is better)
Translates to: TLLTAIRISVLC*RASVMRNEAIS
Trigger: TGATATGGCTTCATTTCTCATGACTGAAGCCCGGCAACATAACACTGAAATTCGAATGGCAGTCAGCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000446284.6
ENST00000489645.1
CDS CCA 72 bp TTTTTCAAGAGCTGTCGAAGTTTGTCCAATTCCTCCTaGTATGACTTGCGAATTTCATCTATCTCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: FFKSCRSLSNSS*YDLRISSISSS
Trigger: CGAGGAGGAGATAGATGAAATTCGCAAGTCATACCAGGAGGAATTGGACAAACTTCGACAGCTCTTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 72 bp GTATTTATTGCAAGTTGTTCACTGAGGGAGTTAGATTaGGTACGAAGAGCTGGCTCCCCTGATTTGAAAGGT +
Preference number: 6 (lower is better)
Translates to: VFIASCSLRELD*VRRAGSPDLKG
Trigger: ACCTTTCAAATCAGGGGAGCCAGCTCTTCGTACCAAATCTAACTCCCTCAGTGAACAACTTGCAATAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CAA 72 bp GTTCACATGAATCCTAGCAACCGTAACTGGCTGTTGTaGACTGATATAAAGAAGAATCCTATACTCTCTGGC +
Preference number: 6 (lower is better)
Translates to: VHMNPSNRNWLL*TDIKKNPILSG
Trigger: GCCAGAGAGTATAGGATTCTTCTTTATATCAGTCAACAACAGCCAGTTACGGTTGCTAGGATTCATGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000414250.2
ENST00000446284.6
CDS CAA 90 bp ATGCTTGTTTCCATTGTAACTGACATGCTAGGAATAAGCATGGAATaGCCAGCACTATGTTTCTGTAACTCTTCAACCTTAGTCATGAGA +
Preference number: 6 (lower is better)
Translates to: MLVSIVTDMLGISME*PALCFCNSSTLVMR
Trigger: TCTCATGACTAAGGTTGAAGAGTTACAGAAACATAGTGCTGGCAATTCCATGCTTATTCCTAGCATGTCAGTTACAATGGAAACAAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000446284.6
ENST00000489645.1
CDS CAA 72 bp TCCATTGTAACTGACATGCTAGGAATAAGCATGGAATaGCCAGCACTATGTTTCTGTAACTCTTCAACCTTA +
Preference number: 6 (lower is better)
Translates to: SIVTDMLGISME*PALCFCNSSTL
Trigger: TAAGGTTGAAGAGTTACAGAAACATAGTGCTGGCAATTCCATGCTTATTCCTAGCATGTCAGTTACAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238256.8
ENST00000446284.6
ENST00000489645.1
CDS CAA 72 bp CTGTTCTTCTATCCGATTGCTCTTTTCAAGGATCTCTaGCTTCAATCTTTCATTTTCCTGAATGATTCGCTG +
Preference number: 6 (lower is better)
Translates to: LFFYPIALFKDL*LQSFIFLNDSL
Trigger: CAGCGAATCATTCAGGAAAATGAAAGATTGAAGCAAGAGATCCTTGAAAAGAGCAATCGGATAGAAGAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238256.8
ENST00000446284.6
CDS CAA 90 bp ACCACAGAAATCTCCAATTCAGATGTTAAAAGTTCTACTGATATTTaGTCCGTGGAAGGGCTAAATAACCGTTTTGCAACAAACAGAGGT +
Preference number: 6 (lower is better)
Translates to: TTEISNSDVKSSTDI*SVEGLNNRFATNRG
Trigger: ACCTCTGTTTGTTGCAAAACGGTTATTTAGCCCTTCCACGGACAAAATATCAGTAGAACTTTTAACATCTGAATTGGAGATTTCTGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462889.1
CDS TCA 72 bp AAATGGATAGTAGTGATGGTTGCTCAATCAATACTGTaGATGCAATTAATGGCACTGGATTATGCACTTAAA +
Preference number: 6 (lower is better)
Translates to: KWIVVMVAQSIL*MQLMALDYALK
Trigger: TTTAAGTGCATAATCCAGTGCCATTAATTGCATTCACAGTATTGATTGAGCAACCATCACTACTATCCATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493847.1