RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FKBP10 (Homo sapiens)

Ensembl gene IDs: ENSG00000141756

Ensembl transcript IDs: ENST00000321562.9, ENST00000429461.5, ENST00000455106.1, ENST00000464180.1, ENST00000489591.5, ENST00000490938.5, ENST00000585664.5, ENST00000585922.5

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGAGAGGGGCCGAGCGGTGCCTGGAATCCCACTGTGGGAGGGGGTaGCCTAGACACAATGGGCAGTTCGGAGGAGGAGCTGAGGTGGTG +
Preference number: 1 (lower is better)
Translates to: MRGAERCLESHCGRG*PRHNGQFGGGAEVV
Trigger: CACCACCTCAGCTCCTCCTCCGAACTGCCCATTGTGTCTAGGCCACCCCCTCCCACAGTGGGATTCCAGGCACCGCTCGGCCCCTCTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 90 bp CCTCCCCAAACTTGGCTGCCCTTCTCCACTGCGGAAGGGGCGAAGTaGGGCGCTGCCCTGGAGGAAACCGATGGAGTCTGTGTGGCAGGA +
Preference number: 1 (lower is better)
Translates to: PPQTWLPFSTAEGAK*GAALEETDGVCVAG
Trigger: TCCTGCCACACAGACTCCATCGGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAGCCAAGTTTGGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR TCA 90 bp TCAGGGTCCTGCCCAGGCATGAGGCGTCCTTTGCCCTCACTCACTTaGGCCTTGATGAAGGTGGAGAACTCCTCCGGAGGGACCTCGCCA +
Preference number: 1 (lower is better)
Translates to: SGSCPGMRRPLPSLT*ALMKVENSSGGTSP
Trigger: TGGCGAGGTCCCTCCGGAGGAGTTCTCCACCTTCATCAAGGCTCAAGTGAGTGAGGGCAAAGGACGCCTCATGCCTGGGCAGGACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR TCA 90 bp CCCTGCCCCTCAGAGCTCCTCGTGGACCCGCTCCTCGTCCTCATCTaGCTTCAGCTTGAGCTCGTCGACTGTGATCTTGCCGTCCTGGTT +
Preference number: 1 (lower is better)
Translates to: PCPSELLVDPLLVLI*LQLELVDCDLAVLV
Trigger: AACCAGGACGGCAAGATCACAGTCGACGAGCTCAAGCTGAAGTCAGATGAGGACGAGGAGCGGGTCCACGAGGAGCTCTGAGGGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR GCA 90 bp AACTTGGCTGCCCTTCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTaGCCTGGAGGAAACCGATGGAGTCTGTGTGGCAGGAATCAGATG +
Preference number: 1 (lower is better)
Translates to: NLAALLHCGRGEVGR*PGGNRWSLCGRNQM
Trigger: CATCTGATTCCTGCCACACAGACTCCATCGGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAGCCAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 90 bp GGGCGAAGTGGGGCGCTGCCCTGGAGGAAACCGATGGAGTCTGTGTaGCAGGAATCAGATGGGGTGACCAGATGTAAGCTGCATGCATGT +
Preference number: 1 (lower is better)
Translates to: GRSGALPWRKPMESV*QESDGVTRCKLHAC
Trigger: ACATGCATGCAGCTTACATCTGGTCACCCCATCTGATTCCTGCCACACAGACTCCATCGGTTTCCTCCAGGGCAGCGCCCCACTTCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 90 bp AGCTCGTCGACTGTGATCTTGCCGTCCTGGTTGCGGTCCTGGTTCTaGAACATGTCTCCTATGGTTTTCTCAGGGTCCTGCCCAGGCATG +
Preference number: 1 (lower is better)
Translates to: SSSTVILPSWLRSWF*NMSPMVFSGSCPGM
Trigger: CATGCCTGGGCAGGACCCTGAGAAAACCATAGGAGACATGTTCCAGAACCAGGACCGCAACCAGGACGGCAAGATCACAGTCGACGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR GCA 90 bp GCCAGGGATCTTGTCTCCGTCTTGCAAACTCCCAGTAACTTACCCTaGGGATCAGCATGGCTTGCCCACTTGACAGGTGAGGACACTGAG +
Preference number: 1 (lower is better)
Translates to: ARDLVSVLQTPSNLP*GSAWLAHLTGEDTE
Trigger: CTCAGTGTCCTCACCTGTCAAGTGGGCAAGCCATGCTGATCCGCAGGGTAAGTTACTGGGAGTTTGCAAGACGGAGACAAGATCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 90 bp TCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTGCAGGTCTCAGATaGCCGGGACAGTGTCCTGATTTCCACCACATCCGCAGGGTTGTG +
Preference number: 1 (lower is better)
Translates to: SNKVPKLGGLIAGLR*PGQCPDFHHIRRVV
Trigger: CACAACCCTGCGGATGTGGTGGAAATCAGGACACTGTCCCGGCCATCTGAGACCTGCAATGAGACCACCAAGCTTGGGGACTTTGTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 90 bp AGCTTGAGCTCGTCGACTGTGATCTTGCCGTCCTGGTTGCGGTCCTaGTTCTGGAACATGTCTCCTATGGTTTTCTCAGGGTCCTGCCCA +
Preference number: 1 (lower is better)
Translates to: SLSSSTVILPSWLRS*FWNMSPMVFSGSCP
Trigger: TGGGCAGGACCCTGAGAAAACCATAGGAGACATGTTCCAGAACCAGGACCGCAACCAGGACGGCAAGATCACAGTCGACGAGCTCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 90 bp GATGGCCGGGACAGTGTCCTGATTTCCACCACATCCGCAGGGTTGTaGAAGTCAATGACATGGACGTTGAAGATTAGCACGGCAGAGCCA +
Preference number: 1 (lower is better)
Translates to: DGRDSVLISTTSAGL*KSMTWTLKISTAEP
Trigger: TGGCTCTGCCGTGCTAATCTTCAACGTCCATGTCATTGACTTCCACAACCCTGCGGATGTGGTGGAAATCAGGACACTGTCCCGGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 90 bp TCATCTGACTTCAGCTTGAGCTCGTCGACTGTGATCTTGCCGTCCTaGTTGCGGTCCTGGTTCTGGAACATGTCTCCTATGGTTTTCTCA +
Preference number: 1 (lower is better)
Translates to: SSDFSLSSSTVILPS*LRSWFWNMSPMVFS
Trigger: TGAGAAAACCATAGGAGACATGTTCCAGAACCAGGACCGCAACCAGGACGGCAAGATCACAGTCGACGAGCTCAAGCTGAAGTCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 90 bp AGAAACACGGTAGAGGTCTGTGCTGTGGATTTTCATCTAGGGTGGTaGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTC +
Preference number: 1 (lower is better)
Translates to: RNTVEVCAVDFHLGW*EHQRCLLCHCFSWL
Trigger: GAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAGACCTCTACCGTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR CCA 90 bp AAGAGAAACACGGTAGAGGTCTGTGCTGTGGATTTTCATCTAGGGTaGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGG +
Preference number: 1 (lower is better)
Translates to: KRNTVEVCAVDFHLG*WEHQRCLLCHCFSW
Trigger: CCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAGACCTCTACCGTGTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR CAA 90 bp CTCAGGGTCCTGCCCAGGCATGAGGCGTCCTTTGCCCTCACTCACTaGAGCCTTGATGAAGGTGGAGAACTCCTCCGGAGGGACCTCGCC +
Preference number: 2 (lower is better)
Translates to: LRVLPRHEASFALTH*SLDEGGELLRRDLA
Trigger: GGCGAGGTCCCTCCGGAGGAGTTCTCCACCTTCATCAAGGCTCAAGTGAGTGAGGGCAAAGGACGCCTCATGCCTGGGCAGGACCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 90 bp CAGAGCTCCTCGTGGACCCGCTCCTCGTCCTCATCTGACTTCAGCTaGAGCTCGTCGACTGTGATCTTGCCGTCCTGGTTGCGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: QSSSWTRSSSSSDFS*SSSTVILPSWLRSW
Trigger: CCAGGACCGCAACCAGGACGGCAAGATCACAGTCGACGAGCTCAAGCTGAAGTCAGATGAGGACGAGGAGCGGGTCCACGAGGAGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR TCA 90 bp AATCCCACTGTGGGAGGGGGTGGCCTAGACACAATGGGCAGTTCGGAGGAGGAGGGTCCATCCCGGGGATaGTGTAACCCTGCCCGATAT +
Preference number: 2 (lower is better)
Translates to: NPTVGGGGLDTMGSSEEEGPSRG*CNPARY
Trigger: ATATCGGGCAGGGTTACATCATCCCCGGGATGGACC...CTCCTCCTCCGAACTGCCCATTGTGTCTAGGCCACCCCCTCCCACAGTGGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCGGGCCGAGCGGTGCCTaGAATCCCACTGTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSGPSGA*NPTVGG
Trigger: CCCTCCCACAGTGGGATTCCAGGCACCGCTCGGCCC...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp CCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGTTGGCCAGTCCCCAAGCTTGGTaGTCTCATTGCAGGTCTCAG +
Preference number: 2 (lower is better)
Translates to: PTHMPCRPVSRPSITLLASPQAW*SHCRSQ
Trigger: CTGAGACCTGCAATGAGACCACCAAGCTTGGGGACT...GGCCAACAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR GCA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCGGCGAAGTGGGGCGCTaGCCTGGAGGAAACCGATGG +
Preference number: 2 (lower is better)
Translates to: KRTDTSLAFECAELCPPSGEVGR*PGGNRW
Trigger: CCATCGGTTTCCTCCAGGGCAGCGCCCCACTTCGCC...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR GCA 90 bp GCCATCCTTGTTGAGGTCCATGTCTTCAAACAGGTTGGCAGGAGGGTCCTTGTGACAGCAGCACAGCACTaGCTGGGACTCCCCGGGCTC +
Preference number: 2 (lower is better)
Translates to: AILVEVHVFKQVGRRVLVTAAQH*LGLPGL
Trigger: GAGCCCGGGGAGTCCCAGGCAGTGCTGTGCTGCTGT...CACAAGGACCCTCCTGCCAACCTGTTTGAAGACATGGACCTCAACAAGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCGTGGGGGACCAGCCATaGCCCTATCCAACCCCAGGC +
Preference number: 2 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSVGDQP*PYPTPG
Trigger: GCCTGGGGTTGGATAGGGCCATGGCTGGTCCCCCAC...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCCAGCTCAGCCTCCACTaGAGGCGAGGGAGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: KRTDTSLAFECAELCPPSQLSLH*RRGRRA
Trigger: TGCCCTCCTCCCTCGCCTCCAGTGGAGGCTGAGCTG...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp GCCATCCTTGTTGAGGTCCATGTCTTCAAACAGGTTGGCAGGAGGGTCCTTGTGGAGGAGCTGAGGTGGTaGCTGGGGAACGCCCCTACC +
Preference number: 2 (lower is better)
Translates to: AILVEVHVFKQVGRRVLVEELRW*LGNAPT
Trigger: GGTAGGGGCGTTCCCCAGCCACCACCTCAGCTCCTC...CACAAGGACCCTCCTGCCAACCTGTTTGAAGACATGGACCTCAACAAGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCCTGTCCCCCTCGCAGTaGGCCTCTGTGTCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLLSPSQ*ASVSQA
Trigger: GGCCTGAGACACAGAGGCCCACTGCGAGGGGGACAG...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp GTCCATCCCGGGGATGATGTAACCCTGCCCGATATAGGTATTGTAGGTGTGGTTGTGGGGGACCAGCCATaGCCCTATCCAACCCCAGGC +
Preference number: 2 (lower is better)
Translates to: VHPGDDVTLPDIGIVGVVVGDQP*PYPTPG
Trigger: GCCTGGGGTTGGATAGGGCCATGGCTGGTCCCCCAC...AACCACACCTACAATACCTATATCGGGCAGGGTTACATCATCCCCGGGATGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp GCAGAGCCAGGGATCTTGTCTCCGTCTTGCAAACTCCCAGTAACTTACCCTGCGGACCAGCGAGGCCTGTaGGGGGATCACTGTCCCATA +
Preference number: 2 (lower is better)
Translates to: AEPGILSPSCKLPVTYPADQRGL*GDHCPI
Trigger: TATGGGACAGTGATCCCCCCACAGGCCTCGCTGGTC...CGCAGGGTAAGTTACTGGGAGTTTGCAAGACGGAGACAAGATCCCTGGCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp GCAGAGCCAGGGATCTTGTCTCCGTCTTGCAAACTCCCAGTAACTTACCCTGCGAGTGGGGCGCTGCCCTaGAGGAAACCGATGGAGTCT +
Preference number: 2 (lower is better)
Translates to: AEPGILSPSCKLPVTYPASGALP*RKPMES
Trigger: AGACTCCATCGGTTTCCTCCAGGGCAGCGCCCCACT...CGCAGGGTAAGTTACTGGGAGTTTGCAAGACGGAGACAAGATCCCTGGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 90 bp GCCTTGATGAAGGTGGAGAACTCCTCCGGAGGGACCTCGCCATCCTaGTTGAGGTCCATGTCTTCAAACAGGTTGGCAGGAGGGTCCTTG +
Preference number: 2 (lower is better)
Translates to: ALMKVENSSGGTSPS*LRSMSSNRLAGGSL
Trigger: CAAGGACCCTCCTGCCAACCTGTTTGAAGACATGGACCTCAACAAGGATGGCGAGGTCCCTCCGGAGGAGTTCTCCACCTTCATCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR GCA 90 bp CTCTCTCCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGCACGGTAGAGGTCTGTaGTGTGGATTTTCATCTAGG +
Preference number: 2 (lower is better)
Translates to: LSPTHMPCRPVSRPSITLHGRGL*CGFSSR
Trigger: CCTAGATGAAAATCCACAGCACAGACCTCTACCGTG...CAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR GCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGCCCATGCAGGCACCCTaGAGCCCCTGGTCCATCCCG +
Preference number: 2 (lower is better)
Translates to: PRLHRPQIGFANPNILRKPMQAP*SPWSIP
Trigger: CGGGATGGACCAGGGGCTGCAGGGTGCCTGCATGGG...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGCTGTCCCCCTCGCAGTaGGCCTCTGTGTCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGLSPSQ*ASVSQA
Trigger: GGCCTGAGACACAGAGGCCCACTGCGAGGGGGACAG...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp CCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGTTGGCCCCACAGGCCCCAAATTaGCTTTGCAAATCCAAACAT +
Preference number: 2 (lower is better)
Translates to: PTHMPCRPVSRPSITLLAPQAPN*LCKSKH
Trigger: ATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGG...GGCCAACAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGGGAGGGGAGGTATGGTaGGGGACCAGCCATGGCCCT +
Preference number: 2 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQGGEVW*GTSHGP
Trigger: AGGGCCATGGCTGGTCCCCCACCATACCTCCCCTCC...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCGGAGCCAGTCAGGATTaGGGAGGAAGGCAGAGGGGT +
Preference number: 2 (lower is better)
Translates to: KRTDTSLAFECAELCPPSGASQD*GGRQRG
Trigger: ACCCCTCTGCCTTCCTCCCCAATCCTGACTGGCTCC...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR CAA 90 bp TTGATGAAGGTGGAGAACTCCTCCGGAGGGACCTCGCCATCCTTGTaGAGGTCCATGTCTTCAAACAGGTTGGCAGGAGGGTCCTTGTGC +
Preference number: 2 (lower is better)
Translates to: LMKVENSSGGTSPSL*RSMSSNRLAGGSLC
Trigger: GCACAAGGACCCTCCTGCCAACCTGTTTGAAGACATGGACCTCAACAAGGATGGCGAGGTCCCTCCGGAGGAGTTCTCCACCTTCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR TCA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCTGGTCCATGCCCTTaGTCAGCCAACCAGAGCCGA +
Preference number: 2 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLPGPCP*SANQSR
Trigger: TCGGCTCTGGTTGGCTGATCAAGGGCATGGACCAGG...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR GCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGGGGGGCACGATGAGCTaGCGCCTCTCTCCCACACAC +
Preference number: 2 (lower is better)
Translates to: PRLHRPQIGFANPNILRKGGTMS*RLSPTH
Trigger: GTGTGTGGGAGAGAGGCGGCAGCTCATCGTGCCCCC...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 90 bp TCCTCGTCCTCATCTGACTTCAGCTTGAGCTCGTCGACTGTGATCTaGCCGTCCTGGTTGCGGTCCTGGTTCTGGAACATGTCTCCTATG +
Preference number: 2 (lower is better)
Translates to: SSSSSDFSLSSSTVI*PSWLRSWFWNMSPM
Trigger: CATAGGAGACATGTTCCAGAACCAGGACCGCAACCAGGACGGCAAGATCACAGTCGACGAGCTCAAGCTGAAGTCAGATGAGGACGAGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR TCA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCTCAATCAGGAGGACGTaGAAGACCAGCGAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: KRTDTSLAFECAELCPPSSIRRT*KTSEAC
Trigger: ACAGGCCTCGCTGGTCTTTCACGTCCTCCTGATTGA...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp CTGCCCTTCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTGCCCTGGAGGAAACCAACATTTTAAGGAAGTaGTTTAGGGATGGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: LPFSTAEGAKWGAALEETNILRK*FRDGRE
Trigger: TTCTCTTCCATCCCTAAACCACTTCCTTAAAATGTT...GGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp GGACAGCGTCCTTCGGGTTGTGCACGTCAATCAGGAGGACGTGAAAGACCAGCGGCCATAGGCCAGGAATaGAGGGATGATAATCTTCCT +
Preference number: 2 (lower is better)
Translates to: GQRPSGCARQSGGRERPAAIGQE*RDDNLP
Trigger: AGGAAGATTATCATCCCTCCATTCCTGGCCTATGGC...CGCTGGTCTTTCACGTCCTCCTGATTGACGTGCACAACCCGAAGGACGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGCACTGTGGGAGGGGGTaGCCTAGACACAATGGGCAG +
Preference number: 2 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQHCGRG*PRHNGQ
Trigger: CTGCCCATTGTGTCTAGGCCACCCCCTCCCACAGTG...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 90 bp TCAGATGGCCGGGACAGTGTCCTGATTTCCACCACATCCGCAGGGTaGTGGAAGTCAATGACATGGACGTTGAAGATTAGCACGGCAGAG +
Preference number: 2 (lower is better)
Translates to: SDGRDSVLISTTSAG*WKSMTWTLKISTAE
Trigger: CTCTGCCGTGCTAATCTTCAACGTCCATGTCATTGACTTCCACAACCCTGCGGATGTGGTGGAAATCAGGACACTGTCCCGGCCATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 90 bp TCTGACTTCAGCTTGAGCTCGTCGACTGTGATCTTGCCGTCCTGGTaGCGGTCCTGGTTCTGGAACATGTCTCCTATGGTTTTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: SDFSLSSSTVILPSW*RSWFWNMSPMVFSG
Trigger: CCCTGAGAAAACCATAGGAGACATGTTCCAGAACCAGGACCGCAACCAGGACGGCAAGATCACAGTCGACGAGCTCAAGCTGAAGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCGTTTTAGTTGGCTCCTaGACCTCATCCCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFVLVGS*TSSQQR
Trigger: CCTCTGCTGGGATGAGGTCCAGGAGCCAACTAAAAC...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGGGTTGCGGGAGTAGCTaGAATCGAAGAGGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQGCGSS*NRRGCR
Trigger: ACGGCACCCTCTTCGATTCCAGCTACTCCCGCAACC...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR TCA 90 bp CAAAGAACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTTGTAGTGGTAGCGCATaGAGTCCCCGGCCCCGGCTC +
Preference number: 2 (lower is better)
Translates to: QRTVVMVSNKVPKLGGLICSGSA*SPRPRL
Trigger: GAGCCGGGGCCGGGGACTTCATGCGCTACCACTACA...AATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp GCCATCCTTGTTGAGGTCCATGTCTTCAAACAGGTTGGCAGGAGGGTCCTTGTGACATCCGCAGGGTTGTaGAAGTCAATGACATGGACG +
Preference number: 2 (lower is better)
Translates to: AILVEVHVFKQVGRRVLVTSAGL*KSMTWT
Trigger: CGTCCATGTCATTGACTTCCACAACCCTGCGGATGT...CACAAGGACCCTCCTGCCAACCTGTTTGAAGACATGGACCTCAACAAGGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CCA 90 bp GCCATCCTTGTTGAGGTCCATGTCTTCAAACAGGTTGGCAGGAGGGTCCTTGTGCAAAGTCCCCAAGCTTaGTGGTCTCATTGCAGGTCT +
Preference number: 2 (lower is better)
Translates to: AILVEVHVFKQVGRRVLVQSPQA*WSHCRS
Trigger: AGACCTGCAATGAGACCACCAAGCTTGGGGACTTTG...CACAAGGACCCTCCTGCCAACCTGTTTGAAGACATGGACCTCAACAAGGATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 90 bp TCAATGACATGGACGTTGAAGATTAGCACGGCAGAGCCAGGGATCTaGTCTCCGTCTTGCAAACTCCCAGTAACTTACCCTGCGGATCAG +
Preference number: 2 (lower is better)
Translates to: SMTWTLKISTAEPGI*SPSCKLPVTYPADQ
Trigger: CTGATCCGCAGGGTAAGTTACTGGGAGTTTGCAAGACGGAGACAAGATCCCTGGCTCTGCCGTGCTAATCTTCAACGTCCATGTCATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR GCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCCACGGTAGAGGTCTGTaGTGTGGATTTTCATCTAGG +
Preference number: 2 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSHGRGL*CGFSSR
Trigger: CCTAGATGAAAATCCACAGCACAGACCTCTACCGTG...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp AACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTGCAGGTCCAGCGTCTCTAGCTaGACAGCGTCCTTCGGGTTG +
Preference number: 2 (lower is better)
Translates to: NSCNGIEQSPQAWWSHCRSSVSS*TASFGL
Trigger: CAACCCGAAGGACGCTGTCCAGCTAGAGACGCTGGA...CCTGCAATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 90 bp CATAGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTaGTTTTCTTCCTCTCTTCTATGGTTCCTTAGGGAAAGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: HSPNTHPSSFPHTCP*FSSSLLWFLRERSL
Trigger: AAGGCTCCTTTCCCTAAGGAACCATAGAAGAGAGGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR GCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCCAGAGATGTCTCCTCTaGCATTGTTTTAGTTGGCTC +
Preference number: 2 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSQRCLL*HCFSWL
Trigger: GAGCCAACTAAAACAATGGCAGAGGAGACATCTCTG...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGGTTTTAGTTGGCTCCTaGACCTCATCCCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: PRLHRPQIGFANPNILRKVLVGS*TSSQQR
Trigger: CCTCTGCTGGGATGAGGTCCAGGAGCCAACTAAAAC...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp AACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTGCAGGCCGATGGAGTCTGTGTaGCAGGAATCAGATGGGGTG +
Preference number: 2 (lower is better)
Translates to: NSCNGIEQSPQAWWSHCRPMESV*QESDGV
Trigger: CACCCCATCTGATTCCTGCCACACAGACTCCATCGG...CCTGCAATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR GCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGCAGAGATGTCTCCTCTaGCATTGTTTTAGTTGGCTC +
Preference number: 2 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQQRCLL*HCFSWL
Trigger: GAGCCAACTAAAACAATGGCAGAGGAGACATCTCTG...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGGATTTTCATCTAGGGTaGTGGGAACACCAGAGATGT +
Preference number: 2 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQDFHLG*WEHQRC
Trigger: ACATCTCTGGTGTTCCCACCACCCTAGATGAAAATC...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGTGCCATTGTTTTAGTTaGCTCCTGGACCTCATCCCA +
Preference number: 2 (lower is better)
Translates to: ERESLGRWITSSAVSVMWCHCFS*LLDLIP
Trigger: TGGGATGAGGTCCAGGAGCCAACTAAAACAATGGCA...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGTTTCATCTAGGGTGGTaGGAACACCAGAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVFHLGW*EHQRCL
Trigger: GAGACATCTCTGGTGTTCCCACCACCCTAGATGAAA...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGTTTCATCTAGGGTGGTaGGAACACCAGAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: ERESLGRWITSSAVSVMWFHLGW*EHQRCL
Trigger: GAGACATCTCTGGTGTTCCCACCACCCTAGATGAAA...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCGATTTTCATCTAGGGTaGTGGGAACACCAGAGATGT +
Preference number: 2 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGDFHLG*WEHQRC
Trigger: ACATCTCTGGTGTTCCCACCACCCTAGATGAAAATC...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGCCACAGGCCCCAAATTaGCTTTGCAAATCCAAACAT +
Preference number: 2 (lower is better)
Translates to: PRLHRPQIGFANPNILRKPQAPN*LCKSKH
Trigger: ATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGG...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR GCA 72 bp GCCCTTCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTaGCCTGGAGGAAACCGATGGAGTCTGTGTGGCAGG +
Preference number: 3 (lower is better)
Translates to: ALLHCGRGEVGR*PGGNRWSLCGR
Trigger: CCTGCCACACAGACTCCATCGGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 72 bp GCCGAGCGGTGCCTGGAATCCCACTGTGGGAGGGGGTaGCCTAGACACAATGGGCAGTTCGGAGGAGGAGCT +
Preference number: 3 (lower is better)
Translates to: AERCLESHCGRG*PRHNGQFGGGA
Trigger: AGCTCCTCCTCCGAACTGCCCATTGTGTCTAGGCCACCCCCTCCCACAGTGGGATTCCAGGCACCGCTCGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 72 bp ACTTGGCTGCCCTTCTCCACTGCGGAAGGGGCGAAGTaGGGCGCTGCCCTGGAGGAAACCGATGGAGTCTGT +
Preference number: 3 (lower is better)
Translates to: TWLPFSTAEGAK*GAALEETDGVC
Trigger: ACAGACTCCATCGGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAGCCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 72 bp CAGGAGGGTCCTTGTGCCACACAAACAGGTAGCCTGTaGGCAGCCCATCCTCCCGGGACACCAGCTCCACCT +
Preference number: 3 (lower is better)
Translates to: QEGPCATQTGSL*AAHPPGTPAPP
Trigger: AGGTGGAGCTGGTGTCCCGGGAGGATGGGCTGCCCACAGGCTACCTGTTTGTGTGGCACAAGGACCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 72 bp TCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTGCCCTaGAGGAAACCGATGGAGTCTGTGTGGCAGGAATCA +
Preference number: 3 (lower is better)
Translates to: SPLRKGRSGALP*RKPMESVWQES
Trigger: TGATTCCTGCCACACAGACTCCATCGGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CAA 90 bp CTGCCCTTCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTGCCCTGGAGGAAACCTCCACAGGCCCCAAATaGGCTTTGCAAATCCAAACA +
Preference number: 3 (lower is better)
Translates to: LPFSTAEGAKWGAALEETSTGPK*ALQIQT
Trigger: TGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGA...GGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR TCA 72 bp TGCCCAGGCATGAGGCGTCCTTTGCCCTCACTCACTTaGGCCTTGATGAAGGTGGAGAACTCCTCCGGAGGG +
Preference number: 3 (lower is better)
Translates to: CPGMRRPLPSLT*ALMKVENSSGG
Trigger: CCCTCCGGAGGAGTTCTCCACCTTCATCAAGGCTCAAGTGAGTGAGGGCAAAGGACGCCTCATGCCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 72 bp GGGGCGCTGCCCTGGAGGAAACCGATGGAGTCTGTGTaGCAGGAATCAGATGGGGTGACCAGATGTAAGCTG +
Preference number: 3 (lower is better)
Translates to: GALPWRKPMESV*QESDGVTRCKL
Trigger: CAGCTTACATCTGGTCACCCCATCTGATTCCTGCCACACAGACTCCATCGGTTTCCTCCAGGGCAGCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR TCA 72 bp TCAGAGCTCCTCGTGGACCCGCTCCTCGTCCTCATCTaGCTTCAGCTTGAGCTCGTCGACTGTGATCTTGCC +
Preference number: 3 (lower is better)
Translates to: SELLVDPLLVLI*LQLELVDCDLA
Trigger: GGCAAGATCACAGTCGACGAGCTCAAGCTGAAGTCAGATGAGGACGAGGAGCGGGTCCACGAGGAGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 72 bp GTCCCCAAGCTTGGTGGTCTCATTGCAGGTCTCAGATaGCCGGGACAGTGTCCTGATTTCCACCACATCCGC +
Preference number: 3 (lower is better)
Translates to: VPKLGGLIAGLR*PGQCPDFHHIR
Trigger: GCGGATGTGGTGGAAATCAGGACACTGTCCCGGCCATCTGAGACCTGCAATGAGACCACCAAGCTTGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR TCA 72 bp TGGAGAACTCCTCCGGAGGGACCTCGCCATCCTTGTTaGGGTCCATGTCTTCAAACAGGTTGGCAGGAGGGT +
Preference number: 3 (lower is better)
Translates to: WRTPPEGPRHPC*GPCLQTGWQEG
Trigger: ACCCTCCTGCCAACCTGTTTGAAGACATGGACCTCAACAAGGATGGCGAGGTCCCTCCGGAGGAGTTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CAA 90 bp GCCATCCTTGTTGAGGTCCATGTCTTCAAACAGGTTGGCAGGAGGGTCCTTGTGAGCTTGGTGGTCTCATaGCAGGTCTCAGATGGCCGG +
Preference number: 3 (lower is better)
Translates to: AILVEVHVFKQVGRRVLVSLVVS*QVSDGR
Trigger: CCGGCCATCTGAGACCTGCAATGAGACCACCAAGCT...CACAAGGACCCTCCTGCCAACCTGTTTGAAGACATGGACCTCAACAAGGATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 72 bp ACTGTGATCTTGCCGTCCTGGTTGCGGTCCTGGTTCTaGAACATGTCTCCTATGGTTTTCTCAGGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: TVILPSWLRSWF*NMSPMVFSGSC
Trigger: GCAGGACCCTGAGAAAACCATAGGAGACATGTTCCAGAACCAGGACCGCAACCAGGACGGCAAGATCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR GCA 72 bp CATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTaGCATTGTTTTAGTTGGCTCCTGGACCTCATCCCA +
Preference number: 3 (lower is better)
Translates to: HLGWWEHQRCLL*HCFSWLLDLIP
Trigger: TGGGATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR-3UTR CAA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCACCTCGCCATCCTTGTaGAGGTCCATGTCTTCAAAC +
Preference number: 3 (lower is better)
Translates to: KRTDTSLAFECAELCPPSTSPSL*RSMSSN
Trigger: GTTTGAAGACATGGACCTCAACAAGGATGGCGAGGT...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CAA 90 bp CAAAGAACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTCCCTGGTCCATGCCCTaGATCAGCCAACCAGAGCCG +
Preference number: 3 (lower is better)
Translates to: QRTVVMVSNKVPKLGGLIPWSMP*ISQPEP
Trigger: CGGCTCTGGTTGGCTGATCAAGGGCATGGACCAGGG...AATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR-3UTR CAA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGACAGCGTCCTTCGGGTaGTGCACGTCAATCAGGAGG +
Preference number: 3 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVTASFG*CTSIRR
Trigger: CCTCCTGATTGACGTGCACAACCCGAAGGACGCTGT...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 72 bp ACGGTAGAGGTCTGTGCTGTGGATTTTCATCTAGGGTaGTGGGAACACCAGAGATGTCTCCTCTGCCATTGT +
Preference number: 3 (lower is better)
Translates to: TVEVCAVDFHLG*WEHQRCLLCHC
Trigger: ACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAGACCTCTACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR CCA 72 bp CACTGTCCCATAGCCTTTCTCGCCATAGGCCAGGAATaGAGGGATGATAATCTTCCTTCTCTCTCCAGGACA +
Preference number: 3 (lower is better)
Translates to: HCPIAFLAIGQE*RDDNLPSLSRT
Trigger: TGTCCTGGAGAGAGAAGGAAGATTATCATCCCTCCATTCCTGGCCTATGGCGAGAAAGGCTATGGGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 72 bp AGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTaGTCTCATTGCAGGTCTCAGATGGCCGGGACAGTG +
Preference number: 3 (lower is better)
Translates to: SCNGIEQSPQAW*SHCRSQMAGTV
Trigger: CACTGTCCCGGCCATCTGAGACCTGCAATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR GCA 72 bp GGTTTAGGGATGGAAGAGAAACACGGTAGAGGTCTGTaGTGTGGATTTTCATCTAGGGTGGTGGGAACACCA +
Preference number: 3 (lower is better)
Translates to: GLGMEEKHGRGL*CGFSSRVVGTP
Trigger: TGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAGACCTCTACCGTGTTTCTCTTCCATCCCTAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR CCA 72 bp GACAGTGTCCTGATTTCCACCACATCCGCAGGGTTGTaGAAGTCAATGACATGGACGTTGAAGATTAGCACG +
Preference number: 3 (lower is better)
Translates to: DSVLISTTSAGL*KSMTWTLKIST
Trigger: CGTGCTAATCTTCAACGTCCATGTCATTGACTTCCACAACCCTGCGGATGTGGTGGAAATCAGGACACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 72 bp AACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTaGTGGTCTCATTGCAGGTCTCAGATGGCCGGGACA +
Preference number: 3 (lower is better)
Translates to: NSCNGIEQSPQA*WSHCRSQMAGT
Trigger: TGTCCCGGCCATCTGAGACCTGCAATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR TCA 72 bp AACCGATGGAGTCTGTGTGGCAGGAATCAGATGGGGTaGCCAGATGTAAGCTGCATGCATGTTTTTGTGATG +
Preference number: 3 (lower is better)
Translates to: NRWSLCGRNQMG*PDVSCMHVFVM
Trigger: CATCACAAAAACATGCATGCAGCTTACATCTGGTCACCCCATCTGATTCCTGCCACACAGACTCCATCGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CCA 72 bp GTAGAGGTCTGTGCTGTGGATTTTCATCTAGGGTGGTaGGAACACCAGAGATGTCTCCTCTGCCATTGTTTT +
Preference number: 3 (lower is better)
Translates to: VEVCAVDFHLGW*EHQRCLLCHCF
Trigger: AAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAGACCTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CTGCCCTTCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTGCCCTGGAGGAAACCCAGCTCAGCCTCCACTaGAGGCGAGGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPFSTAEGAKWGAALEETQLSLH*RRGRRA
Trigger: TGCCCTCCTCCCTCGCCTCCAGTGGAGGCTGAGCTG...GGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp CCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGTTGGCCCCGCGGGGAACATGGTaGCTGGAGTTGGGACCGCCG +
Preference number: 4 (lower is better)
Translates to: PTHMPCRPVSRPSITLLAPRGTW*LELGPP
Trigger: CGGCGGTCCCAACTCCAGGCACCATGTTCCCCGCGG...GGCCAACAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp CTGCCCTTCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTGCCCTGGAGGAAACCACCAGTAGCAGCAACTaGAGCAGGGGGAGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LPFSTAEGAKWGAALEETTSSSN*SRGSRR
Trigger: CCTCCGGCTCCCCCTGCTGCAGTTGCTGCTACTGGT...GGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp CTGCCCTTCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTGCCCTGGAGGAAACCGTGATCTTGCCGTCCTaGTTGCGGTCCTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LPFSTAEGAKWGAALEETVILPS*LRSWFW
Trigger: CCAGAACCAGGACCGCAACCAGGACGGCAAGATCAC...GGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp CTGCCCTTCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTGCCCTGGAGGAAACCCTCCTCGTCCTCATCTaGCTTCAGCTTGAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: LPFSTAEGAKWGAALEETLLVLI*LQLELV
Trigger: GACGAGCTCAAGCTGAAGTCAGATGAGGACGAGGAG...GGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp CCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGTTGGCCTCTCTCCCACACACATaGCCTGCAGGCCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PTHMPCRPVSRPSITLLASLPHT*PAGPCP
Trigger: TGGACACGGGCCTGCAGGGCATGTGTGTGGGAGAGA...GGCCAACAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp CTGCCCTTCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTGCCCTGGAGGAAACCCCGATGGAGTCTGTGTaGCAGGAATCAGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPFSTAEGAKWGAALEETPMESV*QESDGV
Trigger: CACCCCATCTGATTCCTGCCACACAGACTCCATCGG...GGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp AATCCCACTGTGGGAGGGGGTGGCCTAGACACAATGGGCAGTTCGGAGGAGGAGCGTAGTCATGCGAGGTaGACAGCTGGGTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: NPTVGGGGLDTMGSSEEERSHAR*TAGCRP
Trigger: TGGACGGCACCCAGCTGTTCACCTCGCATGACTACG...CTCCTCCTCCGAACTGCCCATTGTGTCTAGGCCACCCCCTCCCACAGTGGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp CCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGTTGGCCCACCAGTTTAGCCTTTaGGTGTGCAGAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: PTHMPCRPVSRPSITLLAHQFSL*VCRALP
Trigger: GGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTG...GGCCAACAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp CTCTCTCCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGCTCCCCAAACTTGGCTaGCCTTCTCCACTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LSPTHMPCRPVSRPSITLLPKLG*PSPLRK
Trigger: CTTCCGCAGTGGAGAAGGGCAGCCAAGTTTGGGGAG...CAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGGAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp CTCTCTCCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGCGCCCTTACTGTAGCTaGTGTCGAAGGAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: LSPTHMPCRPVSRPSITLRPYCS*CRRRCR
Trigger: ACGGCACCTCCTTCGACACCAGCTACAGTAAGGGCG...CAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGGAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp AATCCCACTGTGGGAGGGGGTGGCCTAGACACAATGGGCAGTTCGGAGGAGGAGGACCAGCGAGGCCTGTaGGGGGATCACTGTCCCATA +
Preference number: 4 (lower is better)
Translates to: NPTVGGGGLDTMGSSEEEDQRGL*GDHCPI
Trigger: TATGGGACAGTGATCCCCCCACAGGCCTCGCTGGTC...CTCCTCCTCCGAACTGCCCATTGTGTCTAGGCCACCCCCTCCCACAGTGGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp CTCTCTCCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGGGTTGCGGGAGTAGCTaGAATCGAAGAGGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: LSPTHMPCRPVSRPSITLGCGSS*NRRGCR
Trigger: ACGGCACCCTCTTCGATTCCAGCTACTCCCGCAACC...CAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGGAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCGGTGCGGGGGCACGATaGGCTGCCGCCTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLGAGAR*AAASLP
Trigger: TGGGAGAGAGGCGGCAGCTCATCGTGCCCCCGCACC...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGGGTGCGGGGGCACGATaGGCTGCCGCCTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLGAGAR*AAASLP
Trigger: TGGGAGAGAGGCGGCAGCTCATCGTGCCCCCGCACC...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCGCCCCGCCAGGCCGATaGTCCCATAGCCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLAPPGR*SHSPGG
Trigger: CCCACCTGGGCTATGGGAGCATCGGCCTGGCGGGGC...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321562.9
CDS-3UTR GCA 90 bp GGACAGCGTCCTTCGGGTTGTGCACGTCAATCAGGAGGACGTGAAAGACCAGCGTGGTGTCGAAGGAGGTaGCGTCCAGCAGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GQRPSGCARQSGGRERPAWCRRR*RPAGCH
Trigger: ATGGCACCCTGCTGGACGGCACCTCCTTCGACACCA...CGCTGGTCTTTCACGTCCTCCTGATTGACGTGCACAACCCGAAGGACGCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp CTGCCCTTCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTGCCCTGGAGGAAACCTGGGTCCTGGGGGTATaGTGGTTCTGTTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: LPFSTAEGAKWGAALEETWVLGV*WFCFSI
Trigger: TATGGAAAAACAGAACCAGCATACCCCCAGGACCCA...GGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp GCAGAGCCAGGGATCTTGTCTCCGTCTTGCAAACTCCCAGTAACTTACCCTGCGGGGGAACATGGTGCCTaGAGTTGGGACCGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: AEPGILSPSCKLPVTYPAGEHGA*SWDRRQ
Trigger: CTGCCGGCGGTCCCAACTCCAGGCACCATGTTCCCC...CGCAGGGTAAGTTACTGGGAGTTTGCAAGACGGAGACAAGATCCCTGGCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCACCATGCGGGGGCAGTaGGGCGGGCGCAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSTMRGQ*GGRSNV
Trigger: CACATTGCTGCGCCCGCCCCACTGCCCCCGCATGGT...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCGCGGAAGGGGCGAAGTaGGGCGCTGCCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: KRTDTSLAFECAELCPPSAEGAK*GAALEE
Trigger: TTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGC...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCTGTAGTGGTAGCGCATaGAGTCCCCGGCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSCSGSA*SPRPRL
Trigger: GAGCCGGGGCCGGGGACTTCATGCGCTACCACTACA...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCGGTGCGGGGGCACGATaGGCTGCCGCCTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLIGAGAR*AAASLP
Trigger: TGGGAGAGAGGCGGCAGCTCATCGTGCCCCCGCACC...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCGGTCCTGCCCAGGCATaGGGCGTCCTTTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSGPAQA*GVLCPH
Trigger: GTGAGGGCAAAGGACGCCTCATGCCTGGGCAGGACC...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGTCCGGCGTTCCCCCATaGAGGCACCCTGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLSGVPP*RHPAAP
Trigger: AGGGGCTGCAGGGTGCCTGCATGGGGGAACGCCGGA...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp GTCCATCCCGGGGATGATGTAACCCTGCCCGATATAGGTATTGTAGGTGTGGTTTCCGGCGTTCCCCCATaGAGGCACCCTGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VHPGDDVTLPDIGIVGVVSGVPP*RHPAAP
Trigger: AGGGGCTGCAGGGTGCCTGCATGGGGGAACGCCGGA...AACCACACCTACAATACCTATATCGGGCAGGGTTACATCATCCCCGGGATGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp GGACAGCGTCCTTCGGGTTGTGCACGTCAATCAGGAGGACGTGAAAGACCAGCGGCTTGGTGGTCTCATTaGAGGTCTCAGATGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GQRPSGCARQSGGRERPAAWWSH*RSQMAG
Trigger: CCCGGCCATCTGAGACCTGCAATGAGACCACCAAGC...CGCTGGTCTTTCACGTCCTCCTGATTGACGTGCACAACCCGAAGGACGCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCACAGCAGCACAGCACTaGCTGGGACTCCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSTAAQH*LGLPGL
Trigger: GAGCCCGGGGAGTCCCAGGCAGTGCTGTGCTGCTGT...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp GTCCATCCCGGGGATGATGTAACCCTGCCCGATATAGGTATTGTAGGTGTGGTTCCTGGCCAGGCTCCCTaGCCCTCAGAGCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: VHPGDDVTLPDIGIVGVVPGQAP*PSELLV
Trigger: CACGAGGAGCTCTGAGGGGCAGGGAGCCTGGCCAGG...AACCACACCTACAATACCTATATCGGGCAGGGTTACATCATCCCCGGGATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCGGCGAAGTGGGGCGCTaGCCTGGAGGAAACCGATGG +
Preference number: 4 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFGEVGR*PGGNRW
Trigger: CCATCGGTTTCCTCCAGGGCAGCGCCCCACTTCGCC...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCGAGGGTGGCATCCGGTaGAATGAGCCCCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLEGGIR*NEPRQA
Trigger: GGCCTGGCGGGGCTCATTCCACCGGATGCCACCCTC...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321562.9
CDS-3UTR CCA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCGCACCCTGCAGCCCCTaGTCCATCCCGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFAPCSP*SIPGMM
Trigger: CATCATCCCCGGGATGGACCAGGGGCTGCAGGGTGC...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCGCACCCTGCAGCCCCTaGTCCATCCCGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSAPCSP*SIPGMM
Trigger: CATCATCCCCGGGATGGACCAGGGGCTGCAGGGTGC...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCCAGCACAGCACTGCCTaGGACTCCCCGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFQHSTA*DSPGST
Trigger: AGTGGAGCCCGGGGAGTCCCAGGCAGTGCTGTGCTG...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGTTGGCCGGAACATGTCTCCTATaGTTTTCTCAGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PTHMPCRPVSRPSITLLAGTCLL*FSQGPA
Trigger: GGCAGGACCCTGAGAAAACCATAGGAGACATGTTCC...GGCCAACAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCCTGTCCCCCTCGCAGTaGGCCTCTGTGTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KRTDTSLAFECAELCPPSLSPSQ*ASVSQA
Trigger: GGCCTGAGACACAGAGGCCCACTGCGAGGGGGACAG...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCCTGTCCCCCTCGCAGTaGGCCTCTGTGTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSLSPSQ*ASVSQA
Trigger: GGCCTGAGACACAGAGGCCCACTGCGAGGGGGACAG...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CTCTCTCCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGGTTTTAGTTGGCTCCTaGACCTCATCCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSPTHMPCRPVSRPSITLVLVGS*TSSQQR
Trigger: CCTCTGCTGGGATGAGGTCCAGGAGCCAACTAAAAC...CAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCGGAGGGGAGGTATGGTaGGGGACCAGCCATGGCCCT +
Preference number: 4 (lower is better)
Translates to: KRTDTSLAFECAELCPPSGGEVW*GTSHGP
Trigger: AGGGCCATGGCTGGTCCCCCACCATACCTCCCCTCC...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCGAGGAGCTGAGGTGGTaGCTGGGGAACGCCCCTACC +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSEELRW*LGNAPT
Trigger: GGTAGGGGCGTTCCCCAGCCACCACCTCAGCTCCTC...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCTGGCATCCGGTGGAATaGGCCCCGCCAGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLIWHPVE*APPGRC
Trigger: GCATCGGCCTGGCGGGGCTCATTCCACCGGATGCCA...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321562.9
CDS-3UTR TCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCTGTAGTGGTAGCGCATaGAGTCCCCGGCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLCSGSA*SPRPRL
Trigger: GAGCCGGGGCCGGGGACTTCATGCGCTACCACTACA...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp CCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGTTGGCCTATTGTAGGTGTGGTTaGGGGAGTAGCTGGAATCGA +
Preference number: 4 (lower is better)
Translates to: PTHMPCRPVSRPSITLLAYCRCG*GSSWNR
Trigger: TCGATTCCAGCTACTCCCGCAACCACACCTACAATA...GGCCAACAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGCCCATGCAGGCACCCTaGAGCCCCTGGTCCATCCCG +
Preference number: 4 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQPMQAP*SPWSIP
Trigger: CGGGATGGACCAGGGGCTGCAGGGTGCCTGCATGGG...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCGGGGGCACGATGAGCTaGCGCCTCTCTCCCACACAC +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLGGTMS*RLSPTH
Trigger: GTGTGTGGGAGAGAGGCGGCAGCTCATCGTGCCCCC...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp AGGAAACCGATGGAGTCTGTGTGGCAGGAATCAGATGGGGTGACCAGATGTAAGACAGCAGCACAGCACTaGCTGGGACTCCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RKPMESVWQESDGVTRCKTAAQH*LGLPGL
Trigger: GAGCCCGGGGAGTCCCAGGCAGTGCTGTGCTGCTGT...CTTACATCTGGTCACCCCATCTGATTCCTGCCACACAGACTCCATCGGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGGGCCCGCGGGGAACATaGTGCCTGGAGTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGGPRGT*CLELGP
Trigger: CGGTCCCAACTCCAGGCACCATGTTCCCCGCGGGCC...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCCCCGGGGACAGGCCCTaGGGATGTGGTACCTCTCGA +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLPGDRP*GCGTSR
Trigger: TCGAGAGGTACCACATCCCCAGGGCCTGTCCCCGGG...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCACCATGCGGGGGCAGTaGGGCGGGCGCAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLITMRGQ*GGRSNV
Trigger: CACATTGCTGCGCCCGCCCCACTGCCCCCGCATGGT...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp GCCATCCTTGTTGAGGTCCATGTCTTCAAACAGGTTGGCAGGAGGGTCCTTGTGACAAAGTCGCCGTCCTaGACCATGCGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AILVEVHVFKQVGRRVLVTKSPS*TMRGQW
Trigger: CCACTGCCCCCGCATGGTCCAGGACGGCGACTTTGT...CACAAGGACCCTCCTGCCAACCTGTTTGAAGACATGGACCTCAACAAGGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp CTCTCTCCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGACATCCGCAGGGTTGTaGAAGTCAATGACATGGACG +
Preference number: 4 (lower is better)
Translates to: LSPTHMPCRPVSRPSITLTSAGL*KSMTWT
Trigger: CGTCCATGTCATTGACTTCCACAACCCTGCGGATGT...CAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGGAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCAGCACAGCACTGCCTaGGACTCCCCGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: WWEHQRCLLCHCFSWLLDQHSTA*DSPGST
Trigger: AGTGGAGCCCGGGGAGTCCCAGGCAGTGCTGTGCTG...GTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCCAAACAGGTAGCCTGTaGGCAGCCCATCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSQTGSL*AAHPPG
Trigger: CCCGGGAGGATGGGCTGCCCACAGGCTACCTGTTTG...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCAGCTCAGCCTCCACTaGAGGCGAGGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLQLSLH*RRGRRA
Trigger: TGCCCTCCTCCCTCGCCTCCAGTGGAGGCTGAGCTG...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCCAGCTCAGCCTCCACTaGAGGCGAGGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLQLSLH*RRGRRA
Trigger: TGCCCTCCTCCCTCGCCTCCAGTGGAGGCTGAGCTG...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
3UTR CAA 72 bp GTGGAGAACTCCTCCGGAGGGACCTCGCCATCCTTGTaGAGGTCCATGTCTTCAAACAGGTTGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VENSSGGTSPSL*RSMSSNRLAGG
Trigger: CCCTCCTGCCAACCTGTTTGAAGACATGGACCTCAACAAGGATGGCGAGGTCCCTCCGGAGGAGTTCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 72 bp TCGTGGACCCGCTCCTCGTCCTCATCTGACTTCAGCTaGAGCTCGTCGACTGTGATCTTGCCGTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SWTRSSSSSDFS*SSSTVILPSWL
Trigger: CAACCAGGACGGCAAGATCACAGTCGACGAGCTCAAGCTGAAGTCAGATGAGGACGAGGAGCGGGTCCACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp AATCCCACTGTGGGAGGGGGTGGCCTAGACACAATGGGCAGTTCGGAGGAGGAGGGCTGGGAGTGGGGATaGCAAGAAGTACAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: NPTVGGGGLDTMGSSEEEGWEWG*QEVQRK
Trigger: CTTTCTTTGTACTTCTTGTCATCCCCACTCCCAGCC...CTCCTCCTCCGAACTGCCCATTGTGTCTAGGCCACCCCCTCCCACAGTGGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp GGACAGCGTCCTTCGGGTTGTGCACGTCAATCAGGAGGACGTGAAAGACCAGCGCGTAGGTGTCATAAGTaGCGCCCTTACTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQRPSGCARQSGGRERPARRCHK*RPYCSW
Trigger: CCAGCTACAGTAAGGGCGGCACTTATGACACCTACG...CGCTGGTCTTTCACGTCCTCCTGATTGACGTGCACAACCCGAAGGACGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGGGGGGCACGATGAGCTaGCGCCTCTCTCCCACACAC +
Preference number: 4 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQGGTMS*RLSPTH
Trigger: GTGTGTGGGAGAGAGGCGGCAGCTCATCGTGCCCCC...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCACAGCAGCACAGCACTaGCTGGGACTCCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLITAAQH*LGLPGL
Trigger: GAGCCCGGGGAGTCCCAGGCAGTGCTGTGCTGCTGT...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCGACCAGCGAGGCCTGTaGGGGGATCACTGTCCCATA +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSDQRGL*GDHCPI
Trigger: TATGGGACAGTGATCCCCCCACAGGCCTCGCTGGTC...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGCAGCACAGCACTGCCTaGGACTCCCCGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGQHSTA*DSPGST
Trigger: AGTGGAGCCCGGGGAGTCCCAGGCAGTGCTGTGCTG...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCAAACAGGTAGCCTGTaGGCAGCCCATCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: WWEHQRCLLCHCFSWLLDQTGSL*AAHPPG
Trigger: CCCGGGAGGATGGGCTGCCCACAGGCTACCTGTTTG...GTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGTTGGCCGAAAGTTTGGGGAGATaGATAACAAGCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PTHMPCRPVSRPSITLLAESLGR*ITSSAV
Trigger: CACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTC...GGCCAACAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCGGAGCCAGTCAGGATTaGGGAGGAAGGCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSGASQD*GGRQRG
Trigger: ACCCCTCTGCCTTCCTCCCCAATCCTGACTGGCTCC...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCGCGGAAGGGGCGAAGTaGGGCGCTGCCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGAEGAK*GAALEE
Trigger: TTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGC...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCCTCCCTCCCCAAACTTaGCTGCCCTTCTCCACTGCG +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSLPPQT*LPFSTA
Trigger: CGCAGTGGAGAAGGGCAGCCAAGTTTGGGGAGGGAG...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp TGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCCTGGTCCATGCCCTTaGTCAGCCAACCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: WWEHQRCLLCHCFSWLLDPGPCP*SANQSR
Trigger: TCGGCTCTGGTTGGCTGATCAAGGGCATGGACCAGG...GTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR TCA 90 bp GCAGAGCCAGGGATCTTGTCTCCGTCTTGCAAACTCCCAGTAACTTACCCTGCGTCAATCAGGAGGACGTaGAAGACCAGCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: AEPGILSPSCKLPVTYPASIRRT*KTSEAC
Trigger: ACAGGCCTCGCTGGTCTTTCACGTCCTCCTGATTGA...CGCAGGGTAAGTTACTGGGAGTTTGCAAGACGGAGACAAGATCCCTGGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCTGTAGTGGTAGCGCATaGAGTCCCCGGCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGCSGSA*SPRPRL
Trigger: GAGCCGGGGCCGGGGACTTCATGCGCTACCACTACA...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGGGTCCTGCCCAGGCATaGGGCGTCCTTTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: PRLHRPQIGFANPNILRKGPAQA*GVLCPH
Trigger: GTGAGGGCAAAGGACGCCTCATGCCTGGGCAGGACC...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGCCGCGGGGAACATGGTaGCTGGAGTTGGGACCGCCG +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVPRGTW*LELGPP
Trigger: CGGCGGTCCCAACTCCAGGCACCATGTTCCCCGCGG...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR GCA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCCCCTCCCCACGGCCTaGACCACCAGTAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGPLPTA*TTSSSN
Trigger: GTTGCTGCTACTGGTGGTGCAGGCCGTGGGGAGGGG...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR GCA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGTGGTGTCGAAGGAGGTaGCGTCCAGCAGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLWCRRR*RPAGCH
Trigger: ATGGCACCCTGCTGGACGGCACCTCCTTCGACACCA...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR GCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGCCCATGCAGGCACCCTaGAGCCCCTGGTCCATCCCG +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVPMQAP*SPWSIP
Trigger: CGGGATGGACCAGGGGCTGCAGGGTGCCTGCATGGG...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGCCTGGCCAGGCTCCCTaGCCCTCAGAGCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVPGQAP*PSELLV
Trigger: CACGAGGAGCTCTGAGGGGCAGGGAGCCTGGCCAGG...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGCCTGGCCAGGCTCCCTaGCCCTCAGAGCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: ERESLGRWITSSAVSVMWPGQAP*PSELLV
Trigger: CACGAGGAGCTCTGAGGGGCAGGGAGCCTGGCCAGG...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGGCTGCCCTTCTCCACTaGGGAAGGGGCGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PRLHRPQIGFANPNILRKAALLH*GRGEVG
Trigger: CCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAGC...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCCTCCCCAAACTTGGCTaGCCTTCTCCACTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSLPKLG*PSPLRK
Trigger: CTTCCGCAGTGGAGAAGGGCAGCCAAGTTTGGGGAG...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGGGCCCGCGGGGAACATaGTGCCTGGAGTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: ERESLGRWITSSAVSVMWGPRGT*CLELGP
Trigger: CGGTCCCAACTCCAGGCACCATGTTCCCCGCGGGCC...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCCAGGCCCTGGGGATGTaGTACCTCTCGATGACCACA +
Preference number: 4 (lower is better)
Translates to: KRTDTSLAFECAELCPPSQALGM*YLSMTT
Trigger: TGTGGTCATCGAGAGGTACCACATCCCCAGGGCCTG...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTCCCGGGGACAGGCCCTaGGGATGTGGTACCTCTCGA +
Preference number: 4 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFPGDRP*GCGTSR
Trigger: TCGAGAGGTACCACATCCCCAGGGCCTGTCCCCGGG...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCCCACACCCACCACGATaGCCACCAAGGTGTTGCGAT +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSPHPPR*PPRCCD
Trigger: ATCGCAACACCTTGGTGGCCATCGTGGTGGGTGTGG...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321562.9
CDS-3UTR CCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGACAAAGTCGCCGTCCTaGACCATGCGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQTKSPS*TMRGQW
Trigger: CCACTGCCCCCGCATGGTCCAGGACGGCGACTTTGT...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCTCCAGCGTCTCTAGCTaGACAGCGTCCTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: KRTDTSLAFECAELCPPSSSVSS*TASFGL
Trigger: CAACCCGAAGGACGCTGTCCAGCTAGAGACGCTGGA...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCCTTCGATCACCTTGTTaGCCCCGAGAGTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFLRSPC*PRESPP
Trigger: AGGAGGCGACTCTCGGGGCCAACAAGGTGATCGAAG...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCCTTCGATCACCTTGTTaGCCCCGAGAGTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSLRSPC*PRESPP
Trigger: AGGAGGCGACTCTCGGGGCCAACAAGGTGATCGAAG...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCGTGATCTTGCCGTCCTaGTTGCGGTCCTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSVILPS*LRSWFW
Trigger: CCAGAACCAGGACCGCAACCAGGACGGCAAGATCAC...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTGTGGGGGACCAGCCATaGCCCTATCCAACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFVGDQP*PYPTPG
Trigger: GCCTGGGGTTGGATAGGGCCATGGCTGGTCCCCCAC...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCGGAGGGGAGGTATGGTaGGGGACCAGCCATGGCCCT +
Preference number: 4 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGGGEVW*GTSHGP
Trigger: AGGGCCATGGCTGGTCCCCCACCATACCTCCCCTCC...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCGGAGCCAGTCAGGATTaGGGAGGAAGGCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLGASQD*GGRQRG
Trigger: ACCCCTCTGCCTTCCTCCCCAATCCTGACTGGCTCC...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACGGAGCCAGTCAGGATTaGGGAGGAAGGCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: WWEHQRCLLCHCFSWLLDGASQD*GGRQRG
Trigger: ACCCCTCTGCCTTCCTCCCCAATCCTGACTGGCTCC...GTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGGGGCCGAGCGGTGCCTaGAATCCCACTGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVGPSGA*NPTVGG
Trigger: CCCTCCCACAGTGGGATTCCAGGCACCGCTCGGCCC...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCAGTGGGGCGCTGCCCTaGAGGAAACCGATGGAGTCT +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLSGALP*RKPMES
Trigger: AGACTCCATCGGTTTCCTCCAGGGCAGCGCCCCACT...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 72 bp AAGGTGGAGAACTCCTCCGGAGGGACCTCGCCATCCTaGTTGAGGTCCATGTCTTCAAACAGGTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KVENSSGGTSPS*LRSMSSNRLAG
Trigger: TCCTGCCAACCTGTTTGAAGACATGGACCTCAACAAGGATGGCGAGGTCCCTCCGGAGGAGTTCTCCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCGGTCCATCCCGGGGATaGTGTAACCCTGCCCGATAT +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLGPSRG*CNPARY
Trigger: ATATCGGGCAGGGTTACATCATCCCCGGGATGGACC...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp AGGAAACCGATGGAGTCTGTGTGGCAGGAATCAGATGGGGTGACCAGATGTAAGGGTCCATCCCGGGGATaGTGTAACCCTGCCCGATAT +
Preference number: 4 (lower is better)
Translates to: RKPMESVWQESDGVTRCKGPSRG*CNPARY
Trigger: ATATCGGGCAGGGTTACATCATCCCCGGGATGGACC...CTTACATCTGGTCACCCCATCTGATTCCTGCCACACAGACTCCATCGGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCATGGCTTGCCCACTTaGCAGGTGAGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLHGLPT*QVRTLR
Trigger: CCTCAGTGTCCTCACCTGTCAAGTGGGCAAGCCATG...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp TGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCATGGCTTGCCCACTTaGCAGGTGAGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: WWEHQRCLLCHCFSWLLDHGLPT*QVRTLR
Trigger: CCTCAGTGTCCTCACCTGTCAAGTGGGCAAGCCATG...GTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCTGGCATCCGGTGGAATaGGCCCCGCTTGAATCAAAC +
Preference number: 4 (lower is better)
Translates to: KRTDTSLAFECAELCPPSWHPVE*APLESN
Trigger: GTTTGATTCAAGCGGGGCTCATTCCACCGGATGCCA...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCACCAGTAGCAGCAACTaGAGCAGGGGGAGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGTSSSN*SRGSRR
Trigger: CCTCCGGCTCCCCCTGCTGCAGTTGCTGCTACTGGT...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR GCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCGCGTCCTTCGGGTTGTaGACGTCAATCAGGAGGACG +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLASFGL*TSIRRT
Trigger: CGTCCTCCTGATTGACGTGCACAACCCGAAGGACGC...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR GCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGTCTCTCCCACACACATaGCCTGCAGGCCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQSLPHT*PAGPCP
Trigger: TGGACACGGGCCTGCAGGGCATGTGTGTGGGAGAGA...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp AATCCCACTGTGGGAGGGGGTGGCCTAGACACAATGGGCAGTTCGGAGGAGGAGCAGAGATGTCTCCTCTaGCATTGTTTTAGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: NPTVGGGGLDTMGSSEEEQRCLL*HCFSWL
Trigger: GAGCCAACTAAAACAATGGCAGAGGAGACATCTCTG...CTCCTCCTCCGAACTGCCCATTGTGTCTAGGCCACCCCCTCCCACAGTGGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGGCTGCCCTTCTCCACTaGGGAAGGGGCGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ERESLGRWITSSAVSVMWAALLH*GRGEVG
Trigger: CCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAGC...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp AACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTGCAGGAGAGGGGCCGAGCGGTaGCTGGAATCCCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: NSCNGIEQSPQAWWSHCRRGAER*LESHCG
Trigger: CCCACAGTGGGATTCCAGGCACCGCTCGGCCCCTCT...CCTGCAATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGGGGGAACATGGTGCCTaGAGTTGGGACCGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: ERESLGRWITSSAVSVMWGEHGA*SWDRRQ
Trigger: CTGCCGGCGGTCCCAACTCCAGGCACCATGTTCCCC...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCTGCGAGGTGAACAGCTaGGTGCCGTCCAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSCEVNS*VPSSKE
Trigger: TTCTTTGCTGGACGGCACCCAGCTGTTCACCTCGCA...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGCAAACAGGTAGCCTGTaGGCAGCCCATCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: PRLHRPQIGFANPNILRKQTGSL*AAHPPG
Trigger: CCCGGGAGGATGGGCTGCCCACAGGCTACCTGTTTG...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGCTGTCCCCCTCGCAGTaGGCCTCTGTGTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVLSPSQ*ASVSQA
Trigger: GGCCTGAGACACAGAGGCCCACTGCGAGGGGGACAG...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GGACAGCGTCCTTCGGGTTGTGCACGTCAATCAGGAGGACGTGAAAGACCAGCGTGCCATTGTTTTAGTTaGCTCCTGGACCTCATCCCA +
Preference number: 4 (lower is better)
Translates to: GQRPSGCARQSGGRERPACHCFS*LLDLIP
Trigger: TGGGATGAGGTCCAGGAGCCAACTAAAACAATGGCA...CGCTGGTCTTTCACGTCCTCCTGATTGACGTGCACAACCCGAAGGACGCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp AACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTGCAGGGTGGGGGACCAGCCATaGCCCTATCCAACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: NSCNGIEQSPQAWWSHCRVGDQP*PYPTPG
Trigger: GCCTGGGGTTGGATAGGGCCATGGCTGGTCCCCCAC...CCTGCAATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGAGTGGGGCGCTGCCCTaGAGGAAACCGATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGSGALP*RKPMES
Trigger: TGACTCCATCGGTTTCCTCCAGGGCAGCGCCCCACT...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455106.1
CDS-3UTR CCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGCTCCCTCCCCAAACTTaGCTGCCCTTCTCCACTGCG +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGLPPQT*LPFSTA
Trigger: CGCAGTGGAGAAGGGCAGCCAAGTTTGGGGAGGGAG...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCAGCACAGCTGGGTCCTaGGGGTATGCTGGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSSTAGS*GYAGSV
Trigger: AACAGAACCAGCATACCCCCAGGACCCAGCTGTGCT...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCCACTGTGGGAGGGGGTaGCCTAGACACAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLIHCGRG*PRHNGQ
Trigger: CTGCCCATTGTGTCTAGGCCACCCCCTCCCACAGTG...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 72 bp AGCTTGAGCTCGTCGACTGTGATCTTGCCGTCCTGGTaGCGGTCCTGGTTCTGGAACATGTCTCCTATGGTT +
Preference number: 4 (lower is better)
Translates to: SLSSSTVILPSW*RSWFWNMSPMV
Trigger: AACCATAGGAGACATGTTCCAGAACCAGGACCGCAACCAGGACGGCAAGATCACAGTCGACGAGCTCAAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 72 bp TCATCTGACTTCAGCTTGAGCTCGTCGACTGTGATCTaGCCGTCCTGGTTGCGGTCCTGGTTCTGGAACATG +
Preference number: 4 (lower is better)
Translates to: SSDFSLSSSTVI*PSWLRSWFWNM
Trigger: CATGTTCCAGAACCAGGACCGCAACCAGGACGGCAAGATCACAGTCGACGAGCTCAAGCTGAAGTCAGATGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp TGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACTCAATCAGGAGGACGTaGAAGACCAGCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: WWEHQRCLLCHCFSWLLDSIRRT*KTSEAC
Trigger: ACAGGCCTCGCTGGTCTTTCACGTCCTCCTGATTGA...GTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR TCA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCGGTCCATCCCGGGGATaGTGTAACCCTGCCCGATAT +
Preference number: 4 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLIGPSRG*CNPARY
Trigger: ATATCGGGCAGGGTTACATCATCCCCGGGATGGACC...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCGTAGTCATGCGAGGTaGACAGCTGGGTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGRSHAR*TAGCRP
Trigger: TGGACGGCACCCAGCTGTTCACCTCGCATGACTACG...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCTTGCCCTCACTCACTTaGGCCTTGATGAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFLPSLT*ALMKVE
Trigger: CTCCACCTTCATCAAGGCTCAAGTGAGTGAGGGCAA...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp TGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCCTCGTCCTCATCTaGCTTCAGCTTGAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: WWEHQRCLLCHCFSWLLDLLVLI*LQLELV
Trigger: GACGAGCTCAAGCTGAAGTCAGATGAGGACGAGGAG...GTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCACCAGTTTAGCCTTTaGGTGTGCAGAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLHQFSL*VCRALP
Trigger: GGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTG...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp GCAGAGCCAGGGATCTTGTCTCCGTCTTGCAAACTCCCAGTAACTTACCCTGCGAGGAATCAGATGGGGTaGCCAGATGTAAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: AEPGILSPSCKLPVTYPARNQMG*PDVSCM
Trigger: CATGCAGCTTACATCTGGTCACCCCATCTGATTCCT...CGCAGGGTAAGTTACTGGGAGTTTGCAAGACGGAGACAAGATCCCTGGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGGCGGGCGCAGCAATGTaGTCACCTGCACGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: PRLHRPQIGFANPNILRKAGAAM*SPARCL
Trigger: AAGACACCGTGCAGGTGAGCACATTGCTGCGCCCGC...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR GCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCTGGAATCGAAGAGGGTaGCGTCCATCAAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSWNRRG*RPSRSH
Trigger: ATGGCTCCTTGATGGACGGCACCCTCTTCGATTCCA...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp CAAAGAACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTCCCATGCAGGCACCCTaGAGCCCCTGGTCCATCCCG +
Preference number: 4 (lower is better)
Translates to: QRTVVMVSNKVPKLGGLIPMQAP*SPWSIP
Trigger: CGGGATGGACCAGGGGCTGCAGGGTGCCTGCATGGG...AATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCGCTTGGTGGTCTCATTaGAGGTCTCAGATGGCCGGG +
Preference number: 4 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLIAWWSH*RSQMAG
Trigger: CCCGGCCATCTGAGACCTGCAATGAGACCACCAAGC...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGGCTTGGTGGTCTCATTaGAGGTCTCAGATGGCCGGG +
Preference number: 4 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQAWWSH*RSQMAG
Trigger: CCCGGCCATCTGAGACCTGCAATGAGACCACCAAGC...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCTCTTGCCGTCCTGGTTaGGGTCCTGGTTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLSCRPG*GPGSGT
Trigger: TGTTCCAGAACCAGGACCGCAACCAGGACGGCAAGA...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCGGTTGCGGGAGTAGCTaGAATCGAAGAGGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLIGCGSS*NRRGCR
Trigger: ACGGCACCCTCTTCGATTCCAGCTACTCCCGCAACC...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCATTGCAGGTCTCAGATaGCCGGGACAGTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSIAGLR*PGQCPD
Trigger: ATCAGGACACTGTCCCGGCCATCTGAGACCTGCAAT...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCATTGCAGGTCTCAGATaGCCGGGACAGTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFIAGLR*PGQCPD
Trigger: ATCAGGACACTGTCCCGGCCATCTGAGACCTGCAAT...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCTGCGAGGTGAACAGCTaGGTGCCGTCCAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLCEVNS*VPSSKE
Trigger: TTCTTTGCTGGACGGCACCCAGCTGTTCACCTCGCA...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCTGTCTTCAAACAGGTTaGCAGGAGGGTCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: KRTDTSLAFECAELCPPSCLQTG*QEGPCA
Trigger: GGCACAAGGACCCTCCTGCCAACCTGTTTGAAGACA...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGGAGGGTGGCATCCGGTaGAATGAGCCCCGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQEGGIR*NEPRLN
Trigger: ATTCAAGCGGGGCTCATTCCACCGGATGCCACCCTC...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 72 bp TGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATaGCAGGTCTCAGATGGCCGGGACAGTGTCCTGATT +
Preference number: 4 (lower is better)
Translates to: WYRTKSPSLVVS*QVSDGRDSVLI
Trigger: AATCAGGACACTGTCCCGGCCATCTGAGACCTGCAATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGCCTGGTCCATGCCCTTaGTCAGCCAACCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: ERESLGRWITSSAVSVMWPGPCP*SANQSR
Trigger: TCGGCTCTGGTTGGCTGATCAAGGGCATGGACCAGG...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR TCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGCGTAGTCATGCGAGGTaGACAGCTGGGTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVRSHAR*TAGCRP
Trigger: TGGACGGCACCCAGCTGTTCACCTCGCATGACTACG...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGTCTCTCCCACACACATaGCCTGCAGGCCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ERESLGRWITSSAVSVMWSLPHT*PAGPCP
Trigger: TGGACACGGGCCTGCAGGGCATGTGTGTGGGAGAGA...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGTCTTGCCGTCCTGGTTaGGGTCCTGGTTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGSCRPG*GPGSGT
Trigger: TGTTCCAGAACCAGGACCGCAACCAGGACGGCAAGA...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp CAAAGAACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTGGCGAAGTGGGGCGCTaGCCTGGAGGAAACCGATGG +
Preference number: 4 (lower is better)
Translates to: QRTVVMVSNKVPKLGGLIGEVGR*PGGNRW
Trigger: CCATCGGTTTCCTCCAGGGCAGCGCCCCACTTCGCC...AATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTCCAGCGTCTCTAGCTaGACAGCGTCCTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: PRLHRPQIGFANPNILRKSSVSS*TASFGL
Trigger: CAACCCGAAGGACGCTGTCCAGCTAGAGACGCTGGA...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTCCAGCGTCTCTAGCTaGACAGCGTCCTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFSSVSS*TASFGL
Trigger: CAACCCGAAGGACGCTGTCCAGCTAGAGACGCTGGA...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCGGTTGCGGGAGTAGCTaGAATCGAAGAGGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGGCGSS*NRRGCR
Trigger: ACGGCACCCTCTTCGATTCCAGCTACTCCCGCAACC...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGGAAACCGATGGAGTCTGTGTGGCAGGAATCAGATGGGGTGACCAGATGTAAGAGTCCCCAAGCTTGGTaGTCTCATTGCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RKPMESVWQESDGVTRCKSPQAW*SHCRSQ
Trigger: CTGAGACCTGCAATGAGACCACCAAGCTTGGGGACT...CTTACATCTGGTCACCCCATCTGATTCCTGCCACACAGACTCCATCGGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTCTTCGATCACCTTGTTaGCCCCGAGAGTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFLRSPC*PRESPP
Trigger: AGGAGGCGACTCTCGGGGCCAACAAGGTGATCGAAG...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCGTGATCTTGCCGTCCTaGTTGCGGTCCTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGVILPS*LRSWFW
Trigger: CCAGAACCAGGACCGCAACCAGGACGGCAAGATCAC...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCTGGAGGAAACCGATaGAGTCAGTTCCATTCTCCC +
Preference number: 4 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLPGGNR*SQFHSP
Trigger: GGGAGAATGGAACTGACTCCATCGGTTTCCTCCAGG...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455106.1
CDS-3UTR TCA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCTTGCCCTCACTCACTTaGGCCTTGATGAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLILPSLT*ALMKVE
Trigger: CTCCACCTTCATCAAGGCTCAAGTGAGTGAGGGCAA...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTCACCAGTTTAGCCTTTaGGTGTGCAGAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFHQFSL*VCRALP
Trigger: GGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTG...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGCGTAGGTGTCATAAGTaGCGCCCTTACTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGRRCHK*RPYCSW
Trigger: CCAGCTACAGTAAGGGCGGCACTTATGACACCTACG...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR GCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGGCGTCCTTCGGGTTGTaGACGTCAATCAGGAGGACG +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVASFGL*TSIRRT
Trigger: CGTCCTCCTGATTGACGTGCACAACCCGAAGGACGC...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR GCA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCTGGAATCGAAGAGGGTaGCGTCCATCAAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLIWNRRG*RPSRSH
Trigger: ATGGCTCCTTGATGGACGGCACCCTCTTCGATTCCA...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTCTTGCCGTCCTGGTTaGGGTCCTGGTTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: PRLHRPQIGFANPNILRKSCRPG*GPGSGT
Trigger: TGTTCCAGAACCAGGACCGCAACCAGGACGGCAAGA...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGCGCCCTTACTGTAGCTaGTGTCGAAGGAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVRPYCS*CRRRCR
Trigger: ACGGCACCTCCTTCGACACCAGCTACAGTAAGGGCG...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACACATCCGCAGGGTTGTaGAAGTCAATGACATGGACG +
Preference number: 4 (lower is better)
Translates to: WWEHQRCLLCHCFSWLLDTSAGL*KSMTWT
Trigger: CGTCCATGTCATTGACTTCCACAACCCTGCGGATGT...GTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCATTGCAGGTCTCAGATaGCCGGGACAGTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLIIAGLR*PGQCPD
Trigger: ATCAGGACACTGTCCCGGCCATCTGAGACCTGCAAT...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGAGTCCCCAAGCTTGGTaGTCTCATTGCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQSPQAW*SHCRSQ
Trigger: CTGAGACCTGCAATGAGACCACCAAGCTTGGGGACT...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCCAAAGTCCCCAAGCTTaGTGGTCTCATTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLQSPQA*WSHCRS
Trigger: AGACCTGCAATGAGACCACCAAGCTTGGGGACTTTG...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTGCGAGGTGAACAGCTaGGTGCCGTCCAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFCEVNS*VPSSKE
Trigger: TTCTTTGCTGGACGGCACCCAGCTGTTCACCTCGCA...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGTGTCTTCAAACAGGTTaGCAGGAGGGTCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGCLQTG*QEGPCA
Trigger: GGCACAAGGACCCTCCTGCCAACCTGTTTGAAGACA...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCGGAACATGTCTCCTATaGTTTTCTCAGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLGTCLL*FSQGPA
Trigger: GGCAGGACCCTGAGAAAACCATAGGAGACATGTTCC...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCTTGCGGTCCTGGTTCTaGAACATGTCTCCTATGGTT +
Preference number: 4 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFLRSWF*NMSPMV
Trigger: AACCATAGGAGACATGTTCCAGAACCAGGACCGCAA...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGGTTTTAGTTGGCTCCTaGACCTCATCCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGVLVGS*TSSQQR
Trigger: CCTCTGCTGGGATGAGGTCCAGGAGCCAACTAAAAC...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCTTTCATCTAGGGTGGTaGGAACACCAGAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSFHLGW*EHQRCL
Trigger: GAGACATCTCTGGTGTTCCCACCACCCTAGATGAAA...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGAGCACAGCTGGGTCCTaGGGGTATGCTGGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PRLHRPQIGFANPNILRKSTAGS*GYAGSV
Trigger: AACAGAACCAGCATACCCCCAGGACCCAGCTGTGCT...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGCCTGGAGGAAACCGATaGAGTCTGTGTGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGPGGNR*SLCGRN
Trigger: ATTCCTGCCACACAGACTCCATCGGTTTCCTCCAGG...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 72 bp TGGACGTTGAAGATTAGCACGGCAGAGCCAGGGATCTaGTCTCCGTCTTGCAAACTCCCAGTAACTTACCCT +
Preference number: 4 (lower is better)
Translates to: WTLKISTAEPGI*SPSCKLPVTYP
Trigger: AGGGTAAGTTACTGGGAGTTTGCAAGACGGAGACAAGATCCCTGGCTCTGCCGTGCTAATCTTCAACGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
3UTR CAA 72 bp CGGGACAGTGTCCTGATTTCCACCACATCCGCAGGGTaGTGGAAGTCAATGACATGGACGTTGAAGATTAGC +
Preference number: 4 (lower is better)
Translates to: RDSVLISTTSAG*WKSMTWTLKIS
Trigger: GCTAATCTTCAACGTCCATGTCATTGACTTCCACAACCCTGCGGATGTGGTGGAAATCAGGACACTGTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGCCTCGCCATCCTTGTTaGGGTCCATGTCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQPRHPC*GPCLQT
Trigger: TGTTTGAAGACATGGACCTCAACAAGGATGGCGAGG...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGGGCTGGGAGTGGGGATaGCAAGAAGTACAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQGWEWG*QEVQRK
Trigger: CTTTCTTTGTACTTCTTGTCATCCCCACTCCCAGCC...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGTGCCATCTTCAAAAGTaGCGTTGTAGTGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLCHLQK*RCSGSA
Trigger: TGCGCTACCACTACAACGGCACTTTTGAAGATGGCA...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR GCA 90 bp CAAAGAACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTGCGGGCGCAGCAATGTaGTCACCTGCACGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: QRTVVMVSNKVPKLGGLIAGAAM*SPARCL
Trigger: AAGACACCGTGCAGGTGAGCACATTGCTGCGCCCGC...AATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGTATTGTAGGTGTGGTTaGGGGAGTAGCTGGAATCGA +
Preference number: 4 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLYCRCG*GSSWNR
Trigger: TCGATTCCAGCTACTCCCGCAACCACACCTACAATA...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp TGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCACGGTAGAGGTCTGTaGTGTGGATTTTCATCTAGG +
Preference number: 4 (lower is better)
Translates to: WWEHQRCLLCHCFSWLLDHGRGL*CGFSSR
Trigger: CCTAGATGAAAATCCACAGCACAGACCTCTACCGTG...GTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACGCCATAGGCCAGGAATaGAGGGATGATAATCTTCCT +
Preference number: 4 (lower is better)
Translates to: WWEHQRCLLCHCFSWLLDAIGQE*RDDNLP
Trigger: AGGAAGATTATCATCCCTCCATTCCTGGCCTATGGC...GTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp GCAGAGCCAGGGATCTTGTCTCCGTCTTGCAAACTCCCAGTAACTTACCCTGCGTGGAAGTCAATGACATaGACGTTGAAGATTAGCACG +
Preference number: 4 (lower is better)
Translates to: AEPGILSPSCKLPVTYPAWKSMT*TLKIST
Trigger: CGTGCTAATCTTCAACGTCCATGTCATTGACTTCCA...CGCAGGGTAAGTTACTGGGAGTTTGCAAGACGGAGACAAGATCCCTGGCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGACATCCGCAGGGTTGTaGAAGTCAATGACATGGACG +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGTSAGL*KSMTWT
Trigger: CGTCCATGTCATTGACTTCCACAACCCTGCGGATGT...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCTGTCTTCAAACAGGTTaGCAGGAGGGTCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGCLQTG*QEGPCA
Trigger: GGCACAAGGACCCTCCTGCCAACCTGTTTGAAGACA...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGGGAACATGTCTCCTATaGTTTTCTCAGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGGTCLL*FSQGPA
Trigger: GGCAGGACCCTGAGAAAACCATAGGAGACATGTTCC...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGTGCCATTGTTTTAGTTaGCTCCTGGACCTCATCCCA +
Preference number: 4 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLCHCFS*LLDLIP
Trigger: TGGGATGAGGTCCAGGAGCCAACTAAAACAATGGCA...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCTTTCATCTAGGGTGGTaGGAACACCAGAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLFHLGW*EHQRCL
Trigger: GAGACATCTCTGGTGTTCCCACCACCCTAGATGAAA...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCGATTTTCATCTAGGGTaGTGGGAACACCAGAGATGT +
Preference number: 4 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFDFHLG*WEHQRC
Trigger: ACATCTCTGGTGTTCCCACCACCCTAGATGAAAATC...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCCCACAGGCCCCAAATTaGCTTTGCAAATCCAAACAT +
Preference number: 4 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFPQAPN*LCKSKH
Trigger: ATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGG...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCGAAAGTTTGGGGAGATaGATAACAAGCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSESLGR*ITSSAV
Trigger: CACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTC...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp AACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTGCAGGTTGCCCTCACTCACTTaGGCCTTGATGAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: NSCNGIEQSPQAWWSHCRLPSLT*ALMKVE
Trigger: CTCCACCTTCATCAAGGCTCAAGTGAGTGAGGGCAA...CCTGCAATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR TCA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTGGCTGGGAGTGGGGATaGCAAGAAGTACAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFGWEWG*QEVQRK
Trigger: CTTTCTTTGTACTTCTTGTCATCCCCACTCCCAGCC...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGTGCCATCTTCAAAAGTaGCGTTGTAGTGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGCHLQK*RCSGSA
Trigger: TGCGCTACCACTACAACGGCACTTTTGAAGATGGCA...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR GCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGTGGAATCGAAGAGGGTaGCGTCCATCAAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVWNRRG*RPSRSH
Trigger: ATGGCTCCTTGATGGACGGCACCCTCTTCGATTCCA...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGGTTTTAGTTGGCTCCTaGACCTCATCCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVVLVGS*TSSQQR
Trigger: CCTCTGCTGGGATGAGGTCCAGGAGCCAACTAAAAC...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGTTTCATCTAGGGTGGTaGGAACACCAGAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGFHLGW*EHQRCL
Trigger: GAGACATCTCTGGTGTTCCCACCACCCTAGATGAAA...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGGATTTTCATCTAGGGTaGTGGGAACACCAGAGATGT +
Preference number: 4 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLDFHLG*WEHQRC
Trigger: ACATCTCTGGTGTTCCCACCACCCTAGATGAAAATC...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCCCACAGGCCCCAAATTaGCTTTGCAAATCCAAACAT +
Preference number: 4 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLPQAPN*LCKSKH
Trigger: ATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGG...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGGTCCTGGGGGTATGCTaGTTCTGTTTTTCCATAACC +
Preference number: 4 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQVLGVC*FCFSIT
Trigger: GGTTATGGAAAAACAGAACCAGCATACCCCCAGGAC...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGCCTCGCCATCCTTGTTaGGGTCCATGTCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: ERESLGRWITSSAVSVMWPRHPC*GPCLQT
Trigger: TGTTTGAAGACATGGACCTCAACAAGGATGGCGAGG...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR TCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGCCTCGCCATCCTTGTTaGGGTCCATGTCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVPRHPC*GPCLQT
Trigger: TGTTTGAAGACATGGACCTCAACAAGGATGGCGAGG...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp GCAGAGCCAGGGATCTTGTCTCCGTCTTGCAAACTCCCAGTAACTTACCCTGCGTTGAATCAAACTTCTTaGCATCTTCAAAAGTGCCGT +
Preference number: 4 (lower is better)
Translates to: AEPGILSPSCKLPVTYPALNQTS*HLQKCR
Trigger: ACGGCACTTTTGAAGATGGCAAGAAGTTTGATTCAA...CGCAGGGTAAGTTACTGGGAGTTTGCAAGACGGAGACAAGATCCCTGGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR GCA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCTATTGTAGGTGTGGTTaGGGGAGTAGCTGGAATCGA +
Preference number: 4 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGYCRCG*GSSWNR
Trigger: TCGATTCCAGCTACTCCCGCAACCACACCTACAATA...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGCAGAGATGTCTCCTCTaGCATTGTTTTAGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGQRCLL*HCFSWL
Trigger: GAGCCAACTAAAACAATGGCAGAGGAGACATCTCTG...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTCACGGTAGAGGTCTGTaGTGTGGATTTTCATCTAGG +
Preference number: 4 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFHGRGL*CGFSSR
Trigger: CCTAGATGAAAATCCACAGCACAGACCTCTACCGTG...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTGGGTCCTGGGGGTATaGTGGTTCTGTTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFWVLGV*WFCFSI
Trigger: TATGGAAAAACAGAACCAGCATACCCCCAGGACCCA...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGCAAAGTCCCCAAGCTTaGTGGTCTCATTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVQSPQA*WSHCRS
Trigger: AGACCTGCAATGAGACCACCAAGCTTGGGGACTTTG...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTTGCGGTCCTGGTTCTaGAACATGTCTCCTATGGTT +
Preference number: 4 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFLRSWF*NMSPMV
Trigger: AACCATAGGAGACATGTTCCAGAACCAGGACCGCAA...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTGCCATTGTTTTAGTTaGCTCCTGGACCTCATCCCA +
Preference number: 4 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFCHCFS*LLDLIP
Trigger: TGGGATGAGGTCCAGGAGCCAACTAAAACAATGGCA...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCGTCCTGGGGGTATGCTaGTTCTGTTTTTCCATAACC +
Preference number: 4 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGVLGVC*FCFSIT
Trigger: GGTTATGGAAAAACAGAACCAGCATACCCCCAGGAC...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTGGCCACCAAGGTGTTaGGATCATAGCTTGAATCAA +
Preference number: 4 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFWPPRC*DHSLNQ
Trigger: TTGATTCAAGCTATGATCGCAACACCTTGGTGGCCA...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321562.9
CDS-3UTR CCA 90 bp AACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTGCAGGGCCATAGGCCAGGAATaGAGGGATGATAATCTTCCT +
Preference number: 4 (lower is better)
Translates to: NSCNGIEQSPQAWWSHCRAIGQE*RDDNLP
Trigger: AGGAAGATTATCATCCCTCCATTCCTGGCCTATGGC...CCTGCAATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGTTGCGGTCCTGGTTCTaGAACATGTCTCCTATGGTT +
Preference number: 4 (lower is better)
Translates to: ERESLGRWITSSAVSVMWLRSWF*NMSPMV
Trigger: AACCATAGGAGACATGTTCCAGAACCAGGACCGCAA...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGGAAGTCAATGACATaGACGTTGAAGATTAGCACG +
Preference number: 4 (lower is better)
Translates to: PRLHRPQIGFANPNILRKWKSMT*TLKIST
Trigger: CGTGCTAATCTTCAACGTCCATGTCATTGACTTCCA...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGCCACAGGCCCCAAATTaGCTTTGCAAATCCAAACAT +
Preference number: 4 (lower is better)
Translates to: ERESLGRWITSSAVSVMWPQAPN*LCKSKH
Trigger: ATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGG...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGGAAAGTTTGGGGAGATaGATAACAAGCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ERESLGRWITSSAVSVMWESLGR*ITSSAV
Trigger: CACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTC...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR GCA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGTTGAATCAAACTTCTTaGCATCTTCAAAAGTGCCGT +
Preference number: 4 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGLNQTS*HLQKCR
Trigger: ACGGCACTTTTGAAGATGGCAAGAAGTTTGATTCAA...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CCA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGTGGAAGTCAATGACATaGACGTTGAAGATTAGCACG +
Preference number: 4 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVWKSMT*TLKIST
Trigger: CGTGCTAATCTTCAACGTCCATGTCATTGACTTCCA...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GTCCATCCCGGGGATGATGTAACCCTGCCCGATATAGGTATTGTAGGTGTGGTTAACATTTTAAGGAAGTaGTTTAGGGATGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: VHPGDDVTLPDIGIVGVVNILRK*FRDGRE
Trigger: TTCTCTTCCATCCCTAAACCACTTCCTTAAAATGTT...AACCACACCTACAATACCTATATCGGGCAGGGTTACATCATCCCCGGGATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CCA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGAACATTTTAAGGAAGTaGTTTAGGGATGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PRLHRPQIGFANPNILRKNILRK*FRDGRE
Trigger: TTCTCTTCCATCCCTAAACCACTTCCTTAAAATGTT...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CCA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAACATTTTAAGGAAGTaGTTTAGGGATGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: ERESLGRWITSSAVSVMWNILRK*FRDGRE
Trigger: TTCTCTTCCATCCCTAAACCACTTCCTTAAAATGTT...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS GCA 90 bp CGCCGTCCTGGACCATGCGGGGGCAGTGGGGCGGGCGCAGCAATGTaGTCACCTGCACGGTGTCTTCCTTGTTCCACACATCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: RRPGPCGGSGAGAAM*SPARCLPCSTHPAE
Trigger: TTCTGCTGGATGTGTGGAACAAGGAAGACACCGTGCAGGTGAGCACATTGCTGCGCCCGCCCCACTGCCCCCGCATGGTCCAGGACGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000489591.5
ENST00000585664.5
CDS CCA 90 bp GACTTGGGCCACGCAGCAGAGTGCAGGGGCCCAGCTGTGCAGACGTaGGGTTCCCTTCTCATCTTGCCTCTGCCCCCTAAAGTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: DLGHAAECRGPAVQT*GSLLILPLPPKVWP
Trigger: AGGCCACACTTTAGGGGGCAGAGGCAAGATGAGAAGGGAACCCCACGTCTGCACAGCTGGGCCCCTGCACTCTGCTGCGTGGCCCAAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS-3UTR CAA 90 bp CTGCCCTTCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTGCCCTGGAGGAAACCGGGACCTCGCCATCCTaGTTGAGGTCCATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LPFSTAEGAKWGAALEETGTSPS*LRSMSS
Trigger: TGAAGACATGGACCTCAACAAGGATGGCGAGGTCCC...GGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS GCA 90 bp TGGACCATGCGGGGGCAGTGGGGCGGGCGCAGCAATGTGCTCACCTaGACGGTGTCTTCCTTGTTCCACACATCCAGCAGAACCACATCG +
Preference number: 5 (lower is better)
Translates to: WTMRGQWGGRSNVLT*TVSSLFHTSSRTTS
Trigger: CGATGTGGTTCTGCTGGATGTGTGGAACAAGGAAGACACCGTGCAGGTGAGCACATTGCTGCGCCCGCCCCACTGCCCCCGCATGGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000489591.5
ENST00000585664.5
CDS CCA 90 bp CCTCCCCAAACTTGGCTGCCCTTCTCCACTGCGGAAGGGGCGAAGTaGGGCGCTGCCCTGGAGGAAACCGATGGAGTCAGTTCCATTCTC +
Preference number: 5 (lower is better)
Translates to: PPQTWLPFSTAEGAK*GAALEETDGVSSIL
Trigger: GAGAATGGAACTGACTCCATCGGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAGCCAAGTTTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455106.1
CDS GCA 90 bp AGTTCCGGAGTTACTCCCACTGGTGACTTGGGCCACGCAGCAGAGTaGAGGGGCCCAGCTGTGCAGACGTGGGGTTCCCTTCTCATCTTG +
Preference number: 5 (lower is better)
Translates to: SSGVTPTGDLGHAAE*RGPAVQTWGSLLIL
Trigger: CAAGATGAGAAGGGAACCCCACGTCTGCACAGCTGGGCCCCTGCACTCTGCTGCGTGGCCCAAGTCACCAGTGGGAGTAACTCCGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS TCA 90 bp CTCGACATGCTCCGAGATGGGGACTTACAGAAAGCAGCAAGAGGTTaGATGCTCCCCTGGCGCTCGAGGACCAAGAGGGAGGAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LDMLRDGDLQKAARG*MLPWRSRTKREEQA
Trigger: CGCCTGCTCCTCCCTCTTGGTCCTCGAGCGCCAGGGGAGCATTCAACCTCTTGCTGCTTTCTGTAAGTCCCCATCTCGGAGCATGTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS GCA 90 bp ACATGCTCCGAGATGGGGACTTACAGAAAGCAGCAAGAGGTTGAATaGTCCCCTGGCGCTCGAGGACCAAGAGGGAGGAGCAGGCGTCGG +
Preference number: 5 (lower is better)
Translates to: TCSEMGTYRKQQEVE*SPGARGPRGRSRRR
Trigger: CCGACGCCTGCTCCTCCCTCTTGGTCCTCGAGCGCCAGGGGAGCATTCAACCTCTTGCTGCTTTCTGTAAGTCCCCATCTCGGAGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS-3UTR CAA 90 bp GCAGAGCCAGGGATCTTGTCTCCGTCTTGCAAACTCCCAGTAACTTACCCTGCGACATGGTGCCTGGAGTaGGGACCGCCGGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: AEPGILSPSCKLPVTYPATWCLE*GPPAVR
Trigger: CCTCACTGCCGGCGGTCCCAACTCCAGGCACCATGT...CGCAGGGTAAGTTACTGGGAGTTTGCAAGACGGAGACAAGATCCCTGGCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS TCA 90 bp GGTCTCTCCATGGAGGTCCCCAGACCTGATACCCCTTCCCGACCCTaGGGATCCAAAGGAGGATGGGACGGGATGTTTGTCCAGAGTCAA +
Preference number: 5 (lower is better)
Translates to: GLSMEVPRPDTPSRP*GSKGGWDGMFVQSQ
Trigger: TTGACTCTGGACAAACATCCCGTCCCATCCTCCTTTGGATCCTCAGGGTCGGGAAGGGGTATCAGGTCTGGGGACCTCCATGGAGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490938.5
CDS-3UTR CAA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCAGGCCTTCGATCACCTaGTTGGCCCCGAGAGTCGCC +
Preference number: 5 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFRPSIT*LAPRVA
Trigger: GGCGACTCTCGGGGCCAACAAGGTGATCGAAGGCCT...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCAGGCCTTCGATCACCTaGTTGGCCCCGAGAGTCGCC +
Preference number: 5 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSRPSIT*LAPRVA
Trigger: GGCGACTCTCGGGGCCAACAAGGTGATCGAAGGCCT...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCCCTTCGATCACCTTGTaGGCCCCGAGAGTCGCCTCC +
Preference number: 5 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLPSITL*APRVAS
Trigger: GGAGGCGACTCTCGGGGCCAACAAGGTGATCGAAGG...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCTCGTCGACTGTGATCTaGCCGTCCTGGTTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: KRTDTSLAFECAELCPPSSSTVI*PSWLRS
Trigger: GGACCGCAACCAGGACGGCAAGATCACAGTCGACGA...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp AGCCCTAACACCCACCCAAGCAGCTTCCCTCACACATGCCCTTTGTTTTCTTCCAGCTTGGTGGTCTCATaGCAGGTCTCAGATGGCCGG +
Preference number: 5 (lower is better)
Translates to: SPNTHPSSFPHTCPLFSSSLVVS*QVSDGR
Trigger: CCGGCCATCTGAGACCTGCAATGAGACCACCAAGCT...GGAAGAAAACAAAGGGCATGTGTGAGGGAAGCTGCTTGGGTGGGTGTTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCAGCTTGGTGGTCTCATaGCAGGTCTCAGATGGCCGG +
Preference number: 5 (lower is better)
Translates to: KRTDTSLAFECAELCPPSSLVVS*QVSDGR
Trigger: CCGGCCATCTGAGACCTGCAATGAGACCACCAAGCT...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CTCTCTCCCACACACATGCCCTGCAGGCCCGTGTCCAGGCCTTCGATCACCTTGCCTCACACATGCCCTTaGTTTTCTTCCTCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: LSPTHMPCRPVSRPSITLPHTCP*FSSSLL
Trigger: TAGAAGAGAGGAAGAAAACAAAGGGCATGTGTGAGG...CAAGGTGATCGAAGGCCTGGACACGGGCCTGCAGGGCATGTGTGTGGGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CAA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGCCTCCCTCCCCAAACTaGGCTGCCCTTCTCCACTGC +
Preference number: 5 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQPPSPN*AALLHC
Trigger: GCAGTGGAGAAGGGCAGCCAAGTTTGGGGAGGGAGG...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS GCA 90 bp AAAGAGCAGTTCTCCCCCAACTGTTGGCTTCACCTTCCCTTCCCCTaGGAAGCAGAGAATTTCATCTCCTCGACATGCTCCGAGATGGGG +
Preference number: 5 (lower is better)
Translates to: KEQFSPNCWLHLPFP*EAENFISSTCSEMG
Trigger: CCCCATCTCGGAGCATGTCGAGGAGATGAAATTCTCTGCTTCGCAGGGGAAGGGAAGGTGAAGCCAACAGTTGGGGGAGAACTGCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS CCA 90 bp TCCCCTGCGAAGCAGAGAATTTCATCTCCTCGACATGCTCCGAGATaGGGACTTACAGAAAGCAGCAAGAGGTTGAATGCTCCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: SPAKQRISSPRHAPR*GLTESSKRLNAPLA
Trigger: CGCCAGGGGAGCATTCAACCTCTTGCTGCTTTCTGTAAGTCCCCATCTCGGAGCATGTCGAGGAGATGAAATTCTCTGCTTCGCAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS-3UTR CAA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCAGGCGTCGCCGCTCGTaGACACACATGCCCATGAGG +
Preference number: 5 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGRRRRS*THMPMR
Trigger: CCTCATGGGCATGTGTGTCAACGAGCGGCGACGCCT...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321562.9
CDS-3UTR CAA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCCCTGGTCCATGCCCTaGATCAGCCAACCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGPWSMP*ISQPEP
Trigger: CGGCTCTGGTTGGCTGATCAAGGGCATGGACCAGGG...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CAA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTCCCTGGTCCATGCCCTaGATCAGCCAACCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFPWSMP*ISQPEP
Trigger: CGGCTCTGGTTGGCTGATCAAGGGCATGGACCAGGG...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CAA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGACAGCGTCCTTCGGGTaGTGCACGTCAATCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLTASFG*CTSIRR
Trigger: CCTCCTGATTGACGTGCACAACCCGAAGGACGCTGT...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CAA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTCCTTCGATCACCTTGTaGGCCCCGAGAGTCGCCTCC +
Preference number: 5 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFPSITL*APRVAS
Trigger: GGAGGCGACTCTCGGGGCCAACAAGGTGATCGAAGG...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCCTTCGATCACCTTGTaGGCCCCGAGAGTCGCCTCC +
Preference number: 5 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGPSITL*APRVAS
Trigger: GGAGGCGACTCTCGGGGCCAACAAGGTGATCGAAGG...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp TGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACATCTTGCCGTCCTGGTaGCGGTCCTGGTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: WWEHQRCLLCHCFSWLLDILPSW*RSWFWN
Trigger: GTTCCAGAACCAGGACCGCAACCAGGACGGCAAGAT...GTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGTCGTCGACTGTGATCTaGCCGTCCTGGTTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGSSTVI*PSWLRS
Trigger: GGACCGCAACCAGGACGGCAAGATCACAGTCGACGA...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGGCAGAGCCAGGGATCTaGTCTCCCTGCGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQAEPGI*SPCGSA
Trigger: TGCTGATCCGCAGGGAGACAAGATCCCTGGCTCTGC...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455106.1
CDS-3UTR CAA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGACAGCGTCCTTCGGGTaGTGCACGTCAATCAGGAGG +
Preference number: 5 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGTASFG*CTSIRR
Trigger: CCTCCTGATTGACGTGCACAACCCGAAGGACGCTGT...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CAA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGGCAGAGCCAGGGATCTaGTCTCCAGTTCCATTCTCC +
Preference number: 5 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLAEPGI*SPVPFS
Trigger: GGAGAATGGAACTGGAGACAAGATCCCTGGCTCTGC...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321562.9
CDS-3UTR CAA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGAGCTTGGTGGTCTCATaGCAGGTCTCAGATGGCCGG +
Preference number: 5 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQSLVVS*QVSDGR
Trigger: CCGGCCATCTGAGACCTGCAATGAGACCACCAAGCT...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCACAAAGTCCCCAAGCTaGGTGGTCTCATTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: KRTDTSLAFECAELCPPSTKSPS*VVSLQV
Trigger: GACCTGCAATGAGACCACCAAGCTTGGGGACTTTGT...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGCCTTCGATCACCTaGTTGGCCCCGAGAGTCGCC +
Preference number: 5 (lower is better)
Translates to: ERESLGRWITSSAVSVMWRPSIT*LAPRVA
Trigger: GGCGACTCTCGGGGCCAACAAGGTGATCGAAGGCCT...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGGGGACCTCGCCATCCTaGTTGAGGTCCATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLGTSPS*LRSMSS
Trigger: TGAAGACATGGACCTCAACAAGGATGGCGAGGTCCC...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGCCTCCCTCCCCAAACTaGGCTGCCCTTCTCCACTGC +
Preference number: 5 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVPPSPN*AALLHC
Trigger: GCAGTGGAGAAGGGCAGCCAAGTTTGGGGAGGGAGG...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455106.1
ENST00000489591.5
CDS GCA 90 bp CACCTTCCCTTCCCCTGCGAAGCAGAGAATTTCATCTCCTCGACATaGTCCGAGATGGGGACTTACAGAAAGCAGCAAGAGGTTGAATGC +
Preference number: 5 (lower is better)
Translates to: HLPFPCEAENFISST*SEMGTYRKQQEVEC
Trigger: GCATTCAACCTCTTGCTGCTTTCTGTAAGTCCCCATCTCGGAGCATGTCGAGGAGATGAAATTCTCTGCTTCGCAGGGGAAGGGAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS-3UTR CAA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCACCACATCCGCAGGGTaGTGGAAGTCAATGACATGG +
Preference number: 5 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLTTSAG*WKSMTW
Trigger: CCATGTCATTGACTTCCACAACCCTGCGGATGTGGT...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGACCACATCCGCAGGGTaGTGGAAGTCAATGACATGG +
Preference number: 5 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLTTSAG*WKSMTW
Trigger: CCATGTCATTGACTTCCACAACCCTGCGGATGTGGT...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCTTTGCCCTCACTCACTaGAGCCTTGATGAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFFALTH*SLDEGG
Trigger: TCCACCTTCATCAAGGCTCAAGTGAGTGAGGGCAAA...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGTCGTCGACTGTGATCTaGCCGTCCTGGTTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: ERESLGRWITSSAVSVMWSSTVI*PSWLRS
Trigger: GGACCGCAACCAGGACGGCAAGATCACAGTCGACGA...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCTCATCTGACTTCAGCTaGAGCTCGTCGACTGTGATC +
Preference number: 5 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFSSDFS*SSSTVI
Trigger: GATCACAGTCGACGAGCTCAAGCTGAAGTCAGATGA...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp AAAAGGACTGACACCAGTTTAGCCTTTGAGTGTGCAGAGCTCTGCCCTCCCTCCTCAATGACATGGACGTaGAAGATTAGCACGGCAGAG +
Preference number: 5 (lower is better)
Translates to: KRTDTSLAFECAELCPPSSMTWT*KISTAE
Trigger: CTCTGCCGTGCTAATCTTCAACGTCCATGTCATTGA...GGAGGGAGGGCAGAGCTCTGCACACTCAAAGGCTAAACTGGTGTCAGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCACCACATCCGCAGGGTaGTGGAAGTCAATGACATGG +
Preference number: 5 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLITTSAG*WKSMTW
Trigger: CCATGTCATTGACTTCCACAACCCTGCGGATGTGGT...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CTGTGCTGTGGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGACCTCGCCATCCTTGTaGAGGTCCATGTCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: LCCGFSSRVVGTPEMSPLTSPSL*RSMSSN
Trigger: GTTTGAAGACATGGACCTCAACAAGGATGGCGAGGT...CAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCCACAGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGGGGACCTCGCCATCCTaGTTGAGGTCCATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PRLHRPQIGFANPNILRKGTSPS*LRSMSS
Trigger: TGAAGACATGGACCTCAACAAGGATGGCGAGGTCCC...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGATCTTGCCGTCCTGGTaGCGGTCCTGGTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVILPSW*RSWFWN
Trigger: GTTCCAGAACCAGGACCGCAACCAGGACGGCAAGAT...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGATCTTGCCGTCCTGGTaGCGGTCCTGGTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: ERESLGRWITSSAVSVMWILPSW*RSWFWN
Trigger: GTTCCAGAACCAGGACCGCAACCAGGACGGCAAGAT...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCTCATCTGACTTCAGCTaGAGCTCGTCGACTGTGATC +
Preference number: 5 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLSSDFS*SSSTVI
Trigger: GATCACAGTCGACGAGCTCAAGCTGAAGTCAGATGA...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCTCCACAGGCCCCAAATaGGCTTTGCAAATCCAAACA +
Preference number: 5 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFSTGPK*ALQIQT
Trigger: TGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGA...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGACAAAGTCCCCAAGCTaGGTGGTCTCATTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: PRLHRPQIGFANPNILRKTKSPS*VVSLQV
Trigger: GACCTGCAATGAGACCACCAAGCTTGGGGACTTTGT...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp GGATTTTCATCTAGGGTGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTACAAAGTCCCCAAGCTaGGTGGTCTCATTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: GFSSRVVGTPEMSPLPLFTKSPS*VVSLQV
Trigger: GACCTGCAATGAGACCACCAAGCTTGGGGACTTTGT...AAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCACCCTAGATGAAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGATGTCTTCAAACAGGTaGGCAGGAGGGTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: PRLHRPQIGFANPNILRKMSSNR*AGGSLC
Trigger: GCACAAGGACCCTCCTGCCAACCTGTTTGAAGACAT...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp GAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCATCTTTGCCCTCACTCACTaGAGCCTTGATGAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: EHQRCLLCHCFSWLLDLIFALTH*SLDEGG
Trigger: TCCACCTTCATCAAGGCTCAAGTGAGTGAGGGCAAA...GATGAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp TGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCTCTGGAATGAGCCCCGCTaGAATCAAACTTCTTGCCAT +
Preference number: 5 (lower is better)
Translates to: WEHQRCLLCHCFSWLLDLWNEPR*NQTSCH
Trigger: ATGGCAAGAAGTTTGATTCAAGCGGGGCTCATTCCA...GAGGTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CAA 90 bp CCCTCAGCCCCAAATCCAAGATTTCATAGCCCTAACACCCACCCAAGCAGCTTCCTTGAATCAAACTTCTaGCCATCTTCAAAAGTGCCG +
Preference number: 5 (lower is better)
Translates to: PSAPNPRFHSPNTHPSSFLESNF*PSSKVP
Trigger: CGGCACTTTTGAAGATGGCAAGAAGTTTGATTCAAG...GAAGCTGCTTGGGTGGGTGTTAGGGCTATGAAATCTTGGATTTGGGGCTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CAA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGTGCACGGTGTCTTCCTaGTTCCACACATCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVCTVSS*FHTSSR
Trigger: TCTGCTGGATGTGTGGAACAAGGAAGACACCGTGCA...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CAA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGTCAATGACATGGACGTaGAAGATTAGCACGGCAGAG +
Preference number: 5 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQSMTWT*KISTAE
Trigger: CTCTGCCGTGCTAATCTTCAACGTCCATGTCATTGA...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGATGTCTTCAAACAGGTaGGCAGGAGGGTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVMSSNR*AGGSLC
Trigger: GCACAAGGACCCTCCTGCCAACCTGTTTGAAGACAT...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGATGTCTTCAAACAGGTaGGCAGGAGGGTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: ERESLGRWITSSAVSVMWMSSNR*AGGSLC
Trigger: GCACAAGGACCCTCCTGCCAACCTGTTTGAAGACAT...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGTCCACAGGCCCCAAATaGGCTTTGCAAATCCAAACA +
Preference number: 5 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQSTGPK*ALQIQT
Trigger: TGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGA...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp TGGTGGGAACACCAGAGATGTCTCCTCTGCCATTGTTTTAGTTGGCTCCTGGACCCTCACACATGCCCTTaGTTTTCTTCCTCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: WWEHQRCLLCHCFSWLLDPHTCP*FSSSLL
Trigger: TAGAAGAGAGGAAGAAAACAAAGGGCATGTGTGAGG...GTCCAGGAGCCAACTAAAACAATGGCAGAGGAGACATCTCTGGTGTTCCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTCAATGACATGGACGTaGAAGATTAGCACGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PRLHRPQIGFANPNILRKSMTWT*KISTAE
Trigger: CTCTGCCGTGCTAATCTTCAACGTCCATGTCATTGA...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp GAAAGAGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGACCTCGCCATCCTTGTaGAGGTCCATGTCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: ERESLGRWITSSAVSVMWTSPSL*RSMSSN
Trigger: GTTTGAAGACATGGACCTCAACAAGGATGGCGAGGT...CCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGTTTGCCCTCACTCACTaGAGCCTTGATGAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVFALTH*SLDEGG
Trigger: TCCACCTTCATCAAGGCTCAAGTGAGTGAGGGCAAA...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTGTCATCTGACTTCAGCTaGAGCTCGTCGACTGTGATC +
Preference number: 5 (lower is better)
Translates to: QAPQAPNWLCKSKHFKEVSSDFS*SSSTVI
Trigger: GATCACAGTCGACGAGCTCAAGCTGAAGTCAGATGA...CACTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CCCAGGCTCCACAGGCCCCAAATTGGCTTTGCAAATCCAAACATTTTAAGGAAGTCCACAGGCCCCAAATaGGCTTTGCAAATCCAAACA +
Preference number: 5 (lower is better)
Translates to: PRLHRPQIGFANPNILRKSTGPK*ALQIQT
Trigger: TGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGA...CTTCCTTAAAATGTTTGGATTTGCAAAGCCAATTTGGGGCCTGTGGAGCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp CAAAGAACAGTTGTAATGGTATCGAACAAAGTCCCCAAGCTTGGTGGTCTCATTGCAGAGCCAGGGATCTaGTCTCCGTCTTGCAAACTC +
Preference number: 5 (lower is better)
Translates to: QRTVVMVSNKVPKLGGLIAEPGI*SPSCKL
Trigger: GAGTTTGCAAGACGGAGACAAGATCCCTGGCTCTGC...AATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS-3UTR CAA 90 bp AAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCTCCAGCTTGAATCAAACTTCTaGCCATCTTCAAAAGTGCCG +
Preference number: 5 (lower is better)
Translates to: KGAFFRDEKLTTAQSGLQLESNF*PSSKVP
Trigger: CGGCACTTTTGAAGATGGCAAGAAGTTTGATTCAAG...CTGGAGGCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321562.9
ENST00000489591.5
CDS-3UTR CAA 90 bp TTAGGGAAAGGAGCCTTCTTTAGGGATGAAAAGCTAACTACAGCCCAGTCTGGCCCTCACACATGCCCTTaGTTTTCTTCCTCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: LGKGAFFRDEKLTTAQSGPHTCP*FSSSLL
Trigger: TAGAAGAGAGGAAGAAAACAAAGGGCATGTGTGAGG...GCCAGACTGGGCTGTAGTTAGCTTTTCATCCCTAAAGAAGGCTCCTTTCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000455106.1
ENST00000489591.5
CDS-3UTR CAA 90 bp AGAAAGTTTGGGGAGATGGATAACAAGCTCAGCTGTGTCAGTGATGTGGAGGGGTGTTGCGATCATAGCTaGAATCAAACTTCTTGCCAT +
Preference number: 5 (lower is better)
Translates to: RKFGEMDNKLSCVSDVEGCCDHS*NQTSCH
Trigger: ATGGCAAGAAGTTTGATTCAAGCTATGATCGCAACA...CCCCTCCACATCACTGACACAGCTGAGCTTGTTATCCATCTCCCCAAACTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321562.9
CDS CCA 72 bp CGGACAAAGTCGCCGTCCTGGACCATGCGGGGGCAGTaGGGCGGGCGCAGCAATGTGCTCACCTGCACGGTG +
Preference number: 6 (lower is better)
Translates to: RTKSPSWTMRGQ*GGRSNVLTCTV
Trigger: CACCGTGCAGGTGAGCACATTGCTGCGCCCGCCCCACTGCCCCCGCATGGTCCAGGACGGCGACTTTGTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000489591.5
ENST00000585664.5
CDS GCA 72 bp CGGGGGCAGTGGGGCGGGCGCAGCAATGTGCTCACCTaGACGGTGTCTTCCTTGTTCCACACATCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: RGQWGGRSNVLT*TVSSLFHTSSR
Trigger: TCTGCTGGATGTGTGGAACAAGGAAGACACCGTGCAGGTGAGCACATTGCTGCGCCCGCCCCACTGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321562.9
ENST00000489591.5
ENST00000585664.5
ENST00000585922.5
CDS GCA 72 bp GTTACTCCCACTGGTGACTTGGGCCACGCAGCAGAGTaGAGGGGCCCAGCTGTGCAGACGTGGGGTTCCCTT +
Preference number: 6 (lower is better)
Translates to: VTPTGDLGHAAE*RGPAVQTWGSL
Trigger: AAGGGAACCCCACGTCTGCACAGCTGGGCCCCTGCACTCTGCTGCGTGGCCCAAGTCACCAGTGGGAGTAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS CCA 72 bp ACTTGGCTGCCCTTCTCCACTGCGGAAGGGGCGAAGTaGGGCGCTGCCCTGGAGGAAACCGATGGAGTCAGT +
Preference number: 6 (lower is better)
Translates to: TWLPFSTAEGAK*GAALEETDGVS
Trigger: ACTGACTCCATCGGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGCAGCCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455106.1
CDS CAA 72 bp GGCCCAGCTGTGCAGACGTGGGGTTCCCTTCTCATCTaGCCTCTGCCCCCTAAAGTGTGGCCTCGAGGGCTC +
Preference number: 6 (lower is better)
Translates to: GPAVQTWGSLLI*PLPPKVWPRGL
Trigger: GAGCCCTCGAGGCCACACTTTAGGGGGCAGAGGCAAGATGAGAAGGGAACCCCACGTCTGCACAGCTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS CAA 72 bp CAAGCCCTCAGTTCCGGAGTTACTCCCACTGGTGACTaGGGCCACGCAGCAGAGTGCAGGGGCCCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: QALSSGVTPTGD*GHAAECRGPAV
Trigger: CACAGCTGGGCCCCTGCACTCTGCTGCGTGGCCCAAGTCACCAGTGGGAGTAACTCCGGAACTGAGGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS GCA 72 bp GCCCTTCTCCACTGCGGAAGGGGCGAAGTGGGGCGCTaGCCTGGAGGAAACCGATGGAGTCAGTTCCATTCT +
Preference number: 6 (lower is better)
Translates to: ALLHCGRGEVGR*PGGNRWSQFHS
Trigger: AGAATGGAACTGACTCCATCGGTTTCCTCCAGGGCAGCGCCCCACTTCGCCCCTTCCGCAGTGGAGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455106.1
CDS GCA 72 bp GCCCAGCTGTGCAGACGTGGGGTTCCCTTCTCATCTTaGCTCTGCCCCCTAAAGTGTGGCCTCGAGGGCTCA +
Preference number: 6 (lower is better)
Translates to: AQLCRRGVPFSS*LCPLKCGLEGS
Trigger: TGAGCCCTCGAGGCCACACTTTAGGGGGCAGAGGCAAGATGAGAAGGGAACCCCACGTCTGCACAGCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS CCA 72 bp CAGCAGAACCACATCGAAGTAGAGGGTGGCATCCGGTaGAATGAGCCCCGCCAGGCCGATGCTCCCATAGCC +
Preference number: 6 (lower is better)
Translates to: QQNHIEVEGGIR*NEPRQADAPIA
Trigger: GGCTATGGGAGCATCGGCCTGGCGGGGCTCATTCCACCGGATGCCACCCTCTACTTCGATGTGGTTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321562.9
ENST00000585664.5
ENST00000585922.5
CDS CAA 90 bp CCTCGACATGCTCCGAGATGGGGACTTACAGAAAGCAGCAAGAGGTaGAATGCTCCCCTGGCGCTCGAGGACCAAGAGGGAGGAGCAGGC +
Preference number: 6 (lower is better)
Translates to: PRHAPRWGLTESSKR*NAPLALEDQEGGAG
Trigger: GCCTGCTCCTCCCTCTTGGTCCTCGAGCGCCAGGGGAGCATTCAACCTCTTGCTGCTTTCTGTAAGTCCCCATCTCGGAGCATGTCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS CCA 72 bp GGTTCCCTTCTCATCTTGCCTCTGCCCCCTAAAGTGTaGCCTCGAGGGCTCATGGCTCCCTGCGTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: GSLLILPLPPKV*PRGLMAPCVSF
Trigger: GAAACTGACGCAGGGAGCCATGAGCCCTCGAGGCCACACTTTAGGGGGCAGAGGCAAGATGAGAAGGGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS TCA 72 bp CTCCGAGATGGGGACTTACAGAAAGCAGCAAGAGGTTaGATGCTCCCCTGGCGCTCGAGGACCAAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: LRDGDLQKAARG*MLPWRSRTKRE
Trigger: CTCCCTCTTGGTCCTCGAGCGCCAGGGGAGCATTCAACCTCTTGCTGCTTTCTGTAAGTCCCCATCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS GCA 72 bp GAGATGGGGACTTACAGAAAGCAGCAAGAGGTTGAATaGTCCCCTGGCGCTCGAGGACCAAGAGGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: EMGTYRKQQEVE*SPGARGPRGRS
Trigger: GCTCCTCCCTCTTGGTCCTCGAGCGCCAGGGGAGCATTCAACCTCTTGCTGCTTTCTGTAAGTCCCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS CAA 72 bp GCTCCGAGATGGGGACTTACAGAAAGCAGCAAGAGGTaGAATGCTCCCCTGGCGCTCGAGGACCAAGAGGGA +
Preference number: 6 (lower is better)
Translates to: APRWGLTESSKR*NAPLALEDQEG
Trigger: TCCCTCTTGGTCCTCGAGCGCCAGGGGAGCATTCAACCTCTTGCTGCTTTCTGTAAGTCCCCATCTCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS CAA 72 bp TGGACGTTGAAGATTAGCACGGCAGAGCCAGGGATCTaGTCTCCCTGCGGATCAGCATGGCTTGCCCACTTG +
Preference number: 6 (lower is better)
Translates to: WTLKISTAEPGI*SPCGSAWLAHL
Trigger: CAAGTGGGCAAGCCATGCTGATCCGCAGGGAGACAAGATCCCTGGCTCTGCCGTGCTAATCTTCAACGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455106.1
CDS CAA 90 bp TCAATGACATGGACGTTGAAGATTAGCACGGCAGAGCCAGGGATCTaGTCTCCCTGCGGATCAGCATGGCTTGCCCACTTGACAGGTGAG +
Preference number: 6 (lower is better)
Translates to: SMTWTLKISTAEPGI*SPCGSAWLAHLTGE
Trigger: CTCACCTGTCAAGTGGGCAAGCCATGCTGATCCGCAGGGAGACAAGATCCCTGGCTCTGCCGTGCTAATCTTCAACGTCCATGTCATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455106.1
CDS CAA 90 bp TCAATGACATGGACGTTGAAGATTAGCACGGCAGAGCCAGGGATCTaGTCTCCTGAGGCCAGAATGGGGGAGTGTGGTCAGCTCAGAGCA +
Preference number: 6 (lower is better)
Translates to: SMTWTLKISTAEPGI*SPEARMGECGQLRA
Trigger: TGCTCTGAGCTGACCACACTCCCCCATTCTGGCCTCAGGAGACAAGATCCCTGGCTCTGCCGTGCTAATCTTCAACGTCCATGTCATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490938.5
CDS GCA 72 bp TTCTCCCCCAACTGTTGGCTTCACCTTCCCTTCCCCTaGGAAGCAGAGAATTTCATCTCCTCGACATGCTCC +
Preference number: 6 (lower is better)
Translates to: FSPNCWLHLPFP*EAENFISSTCS
Trigger: GGAGCATGTCGAGGAGATGAAATTCTCTGCTTCGCAGGGGAAGGGAAGGTGAAGCCAACAGTTGGGGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS CCA 72 bp CAGCAGAACCACATCGAAGTAGAGGGTGGCATCCGGTaGAATGAGCCCCGCTTGAATCAAACTTCTTGCCAT +
Preference number: 6 (lower is better)
Translates to: QQNHIEVEGGIR*NEPRLNQTSCH
Trigger: ATGGCAAGAAGTTTGATTCAAGCGGGGCTCATTCCACCGGATGCCACCCTCTACTTCGATGTGGTTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS GCA 72 bp TTCCCCTGCGAAGCAGAGAATTTCATCTCCTCGACATaGTCCGAGATGGGGACTTACAGAAAGCAGCAAGAG +
Preference number: 6 (lower is better)
Translates to: FPCEAENFISST*SEMGTYRKQQE
Trigger: CTCTTGCTGCTTTCTGTAAGTCCCCATCTCGGAGCATGTCGAGGAGATGAAATTCTCTGCTTCGCAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS CAA 72 bp CTCTGTGAAATAGAAAGAGCAGTTCTCCCCCAACTGTaGGCTTCACCTTCCCTTCCCCTGCGAAGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: LCEIERAVLPQL*ASPSLPLRSRE
Trigger: TTCTCTGCTTCGCAGGGGAAGGGAAGGTGAAGCCAACAGTTGGGGGAGAACTGCTCTTTCTATTTCACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS GCA 72 bp ATCCGGTGGAATGAGCCCCGCTTGAATCAAACTTCTTaGCATCTTCAAAAGTGCCGTTGTAGTGGTAGCGCA +
Preference number: 6 (lower is better)
Translates to: IRWNEPRLNQTS*HLQKCRCSGSA
Trigger: TGCGCTACCACTACAACGGCACTTTTGAAGATGGCAAGAAGTTTGATTCAAGCGGGGCTCATTCCACCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489591.5
CDS GCA 72 bp CTTTCCAGTAAGAAAGCCCTTTTCCACTCACCGTCTTaGAAACTCCCAGTAACTTACCCTGCGGATCAGCAT +
Preference number: 6 (lower is better)
Translates to: LSSKKALFHSPS*KLPVTYPADQH
Trigger: ATGCTGATCCGCAGGGTAAGTTACTGGGAGTTTGCAAGACGGTGAGTGGAAAAGGGCTTTCTTACTGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490938.5
CDS CCA 72 bp AAGCAGAGAATTTCATCTCCTCGACATGCTCCGAGATaGGGACTTACAGAAAGCAGCAAGAGGTTGAATGCT +
Preference number: 6 (lower is better)
Translates to: KQRISSPRHAPR*GLTESSKRLNA
Trigger: AGCATTCAACCTCTTGCTGCTTTCTGTAAGTCCCCATCTCGGAGCATGTCGAGGAGATGAAATTCTCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464180.1
CDS GCA 72 bp CCAAGGTGTTGCGATCATAGCTTGAATCAAACTTCTTaGCATCTTCAAAAGTGCCGTTGTAGTGGTAGCGCA +
Preference number: 6 (lower is better)
Translates to: PRCCDHSLNQTS*HLQKCRCSGSA
Trigger: TGCGCTACCACTACAACGGCACTTTTGAAGATGGCAAGAAGTTTGATTCAAGCTATGATCGCAACACCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321562.9
ENST00000429461.5
ENST00000585664.5
ENST00000585922.5