RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000139132

Ensembl transcript IDs: ENST00000395740.5, ENST00000427716.6, ENST00000427716.7, ENST00000472289.5, ENST00000473513.5, ENST00000479023.5, ENST00000493087.5, ENST00000494275.5, ENST00000494977.1, ENST00000497153.5, ENST00000525053.6, ENST00000531134.6, ENST00000531134.7, ENST00000534526.7, ENST00000546442.5, ENST00000550091.5, ENST00000551984.5, ENST00000583694.2, ENST00000682739.1, ENST00000683182.1, ENST00000683515.1

Found 875 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCCAAGGGCATCTGTCCCTTCAGACAGATGTGGTTTAGATACCTaGGGGGCACCATACATGTACAGCACAAGAGGGTCTTGCTTGGGG +
Preference number: 1 (lower is better)
Translates to: PPRASVPSDRCGLDT*GAPYMYSTRGSCLG
Trigger: CCCCAAGCAAGACCCTCTTGTGCTGTACATGTATGGTGCCCCCCAGGTATCTAAACCACATCTGTCTGAAGGGACAGATGCCCTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395740.5
3UTR CCA 90 bp CTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTaGCATTTCATCCACCACATAGCCCAGAAGTGGAATGGTGGCCTG +
Preference number: 1 (lower is better)
Translates to: LRLGQFETVWQVCAP*HFIHHIAQKWNGGL
Trigger: CAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR CCA 90 bp AGCAAAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTaGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAG +
Preference number: 1 (lower is better)
Translates to: SKAVHGLRLGQFETV*QVCAPWHFIHHIAQ
Trigger: CTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR TCA 90 bp AGCAGATGTGTAAGAAGAGCTGGGAATGTCTTGAGCTGTAAGTCCTaGGACCTCCACACCATGGCTGGTCCTGGAGGAGTTCAGCATTCT +
Preference number: 1 (lower is better)
Translates to: SRCVRRAGNVLSCKS*DLHTMAGPGGVQHS
Trigger: AGAATGCTGAACTCCTCCAGGACCAGCCATGGTGTGGAGGTCTCAGGACTTACAGCTCAAGACATTCCCAGCTCTTCTTACACATCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
3UTR GCA 90 bp TTCAGCCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTaGACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCT +
Preference number: 1 (lower is better)
Translates to: FSHFCFSSSLSAAKL*TDLDWVSLKLCGRS
Trigger: AGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR GCA 90 bp GGTGTCTCACCTGTGACAGCTAAAAGGATGACTTTCAGCCACTTCTaGTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGACTTA +
Preference number: 1 (lower is better)
Translates to: GVSPVTAKRMTFSHF*FSSSLSAAKLCTDL
Trigger: TAAGTCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGGCTGAAAGTCATCCTTTTAGCTGTCACAGGTGAGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
3UTR TCA 90 bp AGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTaGCTTCTCCATATACTGAAGAAAGCTGCACACCACACTGTTTCC +
Preference number: 1 (lower is better)
Translates to: RVLLGDHTPSFLPRF*LLHILKKAAHHTVS
Trigger: GGAAACAGTGTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR TCA 90 bp ATACTGAAGAAAGCTGCACACCACACTGTTTCCAGATACTTCTGCTaGTTCAATCTGATAGGAGGTAACTGGATCATGGGGGCAGTGTCC +
Preference number: 1 (lower is better)
Translates to: ILKKAAHHTVSRYFC*FNLIGGNWIMGAVS
Trigger: GGACACTGCCCCCATGATCCAGTTACCTCCTATCAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGTGTGCAGCTTTCTTCAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR TCA 90 bp AGTGTCCCCCATGCTGTTCTCGTGATCGTGAGTTCTCATGAGATCTaGTGGTTTTGTAAGTGTCTGACAGTTCTTCCTTCATACACTTGC +
Preference number: 1 (lower is better)
Translates to: SVPHAVLVIVSSHEI*WFCKCLTVLPSYTC
Trigger: GCAAGTGTATGAAGGAAGAACTGTCAGACACTTACAAAACCATCAGATCTCATGAGAACTCACGATCACGAGAACAGCATGGGGGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR TCA 90 bp ATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACTaGAGAAAGCTGCACACCACACTGTTTCCAGATACTTCTGCTGAT +
Preference number: 1 (lower is better)
Translates to: ITHQAFCQGFDFSIY*RKLHTTLFPDTSAD
Trigger: ATCAGCAGAAGTATCTGGAAACAGTGTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR GCA 90 bp ATCAGTGATTCTTTAATAAGAGAGAAGCGGGTAAGGCTGTTTCACTaGTTCTCTTTGCGTTTAGCTGAAGAATGTGGGGTGGAAAGTGAA +
Preference number: 1 (lower is better)
Translates to: ISDSLIREKRVRLFH*FSLRLAEECGVESE
Trigger: TTCACTTTCCACCCCACATTCTTCAGCTAAACGCAAAGAGAAGCAGTGAAACAGCCTTACCCGCTTCTCTCTTATTAAAGAATCACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR TCA 90 bp CATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCATTaGAAGGTTCTTTACATTTCATACACATTGTCACTTCATTATCTC +
Preference number: 1 (lower is better)
Translates to: HIHMLDNDASFVSVH*KVLYISYTLSLHYL
Trigger: GAGATAATGAAGTGACAATGTGTATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR CCA 90 bp AACATGATCCACTACAGATGTCAATACAGTCTGAAGAATAGGAACTaGTTGGCCACAGTTCATATACTAATACATTCTTGGAGAATACAA +
Preference number: 1 (lower is better)
Translates to: NMIHYRCQYSLKNRN*LATVHILIHSWRIQ
Trigger: TTGTATTCTCCAAGAATGTATTAGTATATGAACTGTGGCCAACCAGTTCCTATTCTTCAGACTGTATTGACATCTGTAGTGGATCATGTT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR TCA 90 bp TTCATCCACCACATAGCCCAGAAGTGGAATGGTGGCCTGGGCTCTGACGTCCTGCCACATGCTCGACAATaGTGCCTCCTTCGTGTCAGT +
Preference number: 2 (lower is better)
Translates to: FIHHIAQKWNGGLGSDVLPHARQ*CLLRVS
Trigger: ACTGACACGAAGGAGGCATCATTGTCGAGCATGTGG...CAGGACGTCAGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR GCA 90 bp TTCATCCACCACATAGCCCAGAAGTGGAATGGTGGCCTGGGCTCTGACGTCCTGTGCGCAGAACTGGCCTaGAGTTCCAGTGTTCTCTCT +
Preference number: 2 (lower is better)
Translates to: FIHHIAQKWNGGLGSDVLCAELA*SSSVLS
Trigger: AGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCA...CAGGACGTCAGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp AACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAACCACATGCTCGACAATaGTGCCTCCTTCGTGTCAGT +
Preference number: 2 (lower is better)
Translates to: NCVAGLRSLAFHPPHSPEPHARQ*CLLRVS
Trigger: ACTGACACGAAGGAGGCATCATTGTCGAGCATGTGG...TTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR GCA 90 bp CAGGATGATCATCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACTGCGCAGAACTGGCCTaGAGTTCCAGTGTTCTCTCT +
Preference number: 2 (lower is better)
Translates to: QDDHPRWLDAHLDHLVSHCAELA*SSSVLS
Trigger: AGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCA...GTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGATGATCATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
3UTR-3UTR CCA 90 bp GTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTGTCTTGCGCAGAACTaGCCTGCAGTTCCAGTGTTC +
Preference number: 2 (lower is better)
Translates to: VQHKRVLLGDHTPSFLPRCLAQN*PAVPVF
Trigger: GAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA...CCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp CTTTCAGCCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGTGTCTTGCGCAGAACTaGCCTGCAGTTCCAGTGTTC +
Preference number: 2 (lower is better)
Translates to: LSATSASVPHCLQQSCARCLAQN*PAVPVF
Trigger: GAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA...CCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGGCTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp AAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTGATAGGAGGTAACTaGATCATGGGGGCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: KLCTDLDWVSLKLCGRSALIGGN*IMGAVS
Trigger: GGACACTGCCCCCATGATCCAGTTACCTCCTATCAG...CGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR-3UTR TCA 90 bp TTCATCCACCACATAGCCCAGAAGTGGAATGGTGGCCTGGGCTCTGACGTCCTGCTTCAACCACTGATTTaGACTGGGGAATACGTTCTG +
Preference number: 2 (lower is better)
Translates to: FIHHIAQKWNGGLGSDVLLQPLI*TGEYVL
Trigger: CAGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAG...CAGGACGTCAGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp CACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGGCATCGATGGTTTCTTaGAGGGCCTTGATCCATTCT +
Preference number: 2 (lower is better)
Translates to: HGLRLGQFETVWQVCAPWASMVS*RALIHS
Trigger: AGAATGGATCAAGGCCCTTCAAGAAACCATCGATGC...CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
3UTR-3UTR GCA 90 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACAGCACAAGAGGGTCTTaGTTGGGGATCACACACCAA +
Preference number: 2 (lower is better)
Translates to: GQFETVWQVCAPWHFIHHSTRGS*LGITHQ
Trigger: TTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCT...GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp CCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGACTTAGATGTCTTGCGCAGAACTaGCCTGCAGTTCCAGTGTTC +
Preference number: 2 (lower is better)
Translates to: PLLLQFLTVCSKAVHGLRCLAQN*PAVPVF
Trigger: GAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA...TCTAAGTCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp CACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGACAGGTTCTAGCATGTaGTGCTGCAAAGTTAAGCTC +
Preference number: 2 (lower is better)
Translates to: HGLRLGQFETVWQVCAPWTGSSM*CCKVKL
Trigger: GAGCTTAACTTTGCAGCATCACATGCTAGAACCTGT...CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp TGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAAGTGTCCGAGCAGCTAGTTTaGGGATCTGTCCTTCTTTTA +
Preference number: 2 (lower is better)
Translates to: CVAGLRSLAFHPPHSPEVSEQLV*GSVLLL
Trigger: TAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGA...CACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp TCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCATTGAGCTGTAAGTCCTaGGACCTCCACACCATGGCT +
Preference number: 2 (lower is better)
Translates to: SSLSCAELACSSSVLSFPLSCKS*DLHTMA
Trigger: AGCCATGGTGTGGAGGTCTCAGGACTTACAGCTCAA...TGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
3UTR-3UTR GCA 90 bp GTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAAGTGGTTTTCATTCCATCAATaGCAACCCTGGTTCGAACTG +
Preference number: 2 (lower is better)
Translates to: VWQVCAPWHFIHHIAQKWFSFHQ*QPWFEL
Trigger: CAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAA...CCACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp GGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATTCACCATCTCTGCTaGAAACGAGCCTCGGTTTGC +
Preference number: 2 (lower is better)
Translates to: GSCLGITHQAFCQGFDFSIHHLC*KRASVC
Trigger: GCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT...GGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp AGCAAAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCATTCACCATCTCTGCTaGAAACGAGCCTCGGTTTGC +
Preference number: 2 (lower is better)
Translates to: SKAVHGLRLGQFETVWQVIHHLC*KRASVC
Trigger: GCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT...GACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp CGGGTAAGGCTGTTTCACTGCTTCTCTTTGCGTTTAGCTGTGACAGCTAAAAGGCACATAGCCCAGAAGTaGAATGGTGGCCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: RVRLFHCFSLRLAVTAKRHIAQK*NGGLGS
Trigger: AGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTG...CCTTTTAGCTGTCACAGCTAAACGCAAAGAGAAGCAGTGAAACAGCCTTACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR-3UTR TCA 90 bp TGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTACAGGTTCTAGCATGTaGTGCTGCAAAGTTAAGCTC +
Preference number: 2 (lower is better)
Translates to: CLAQNWPAVPVFSLSQTPTGSSM*CCKVKL
Trigger: GAGCTTAACTTTGCAGCATCACATGCTAGAACCTGT...AGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR GCA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTGCGCAGAACTGGCCTaGAGTTCCAGTGTTCTCTCT +
Preference number: 2 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPCAELA*SSSVLS
Trigger: AGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCA...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR GCA 90 bp CTTTCAGCCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGAACCACATATCCACATaGTCGACAATGATGCCTCCT +
Preference number: 2 (lower is better)
Translates to: LSATSASVPHCLQQSCARNHIST*STMMPP
Trigger: AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT...CCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGGCTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR GCA 90 bp CACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGTATACTGAAGAAAGCTaGACACCACACTGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: HGLRLGQFETVWQVCAPWYTEES*TPHCFQ
Trigger: CTGGAAACAGTGTGGTGTGCAGCTTTCTTCAGTATA...CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp CACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGAATTTCTTCAACCACTaGTTTGAACTGGGGAATACG +
Preference number: 2 (lower is better)
Translates to: HGLRLGQFETVWQVCAPWNFFNH*FELGNT
Trigger: CGTATTCCCCAGTTCAAATCAGTGGTTGAAGAAATT...CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp TCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACCTGTGACAGCTTTTCTTGAAGGGCCTTaGTCCATTCTTCTTTGTCTT +
Preference number: 2 (lower is better)
Translates to: SKVAGCSFGPPGVSPVTAFLEGP*SILLCL
Trigger: AAGACAAAGAAGAATGGATCAAGGCCCTTCAAGAAA...AGCTGTCACAGGTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
3UTR-3UTR TCA 90 bp TCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCCACAGATTTTTGAGCTGTAAGTCCTaGGACCTCCACACCATGGCT +
Preference number: 2 (lower is better)
Translates to: SAEQVLACDAAKLSSHRFLSCKS*DLHTMA
Trigger: AGCCATGGTGTGGAGGTCTCAGGACTTACAGCTCAA...AAATCTGTGGGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
3UTR-3UTR GCA 90 bp GCATCTCATACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTTATTCACCATCTCTaGTGGAAACGAGCCTCGGTT +
Preference number: 2 (lower is better)
Translates to: ASHTGESAEQVLACDAAKFIHHL*WKRASV
Trigger: AACCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAA...CTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR GCA 90 bp CTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTGGACATCTTAAGGAATGGTaGCAATTTCTGAAGGATGTC +
Preference number: 2 (lower is better)
Translates to: LAQNWPAVPVFSLSQTPGHLKEW*QFLKDV
Trigger: GACATCCTTCAGAAATTGGCACCATTCCTTAAGATG...TCCAGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp ATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCATTCACCATCTCTGCTaGAAACGAGCCTCGGTTTGC +
Preference number: 2 (lower is better)
Translates to: MPTLVRTVNLEPTKLNLGIHHLC*KRASVC
Trigger: GCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT...GCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR CAA 90 bp GAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTaGACTTCTCCATATACTGAAGAAAGCTGCACACCACACTGTTTC +
Preference number: 2 (lower is better)
Translates to: EGLAWGSHTKLSAKV*TSPYTEESCTPHCF
Trigger: GAAACAGTGTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp TCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACCTGTGACAGCTACAGCAACATGTTGTTaGATAAGAAAAGGTAGCGTT +
Preference number: 2 (lower is better)
Translates to: SKVAGCSFGPPGVSPVTATATCC*IRKGSV
Trigger: AACGCTACCTTTTCTTATTCAACAACATGTTGCTGT...AGCTGTCACAGGTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
3UTR-3UTR TCA 90 bp TGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAAGTGTTGCAATTGCATTTCTaGAGGTTTCATGCCTTTGAT +
Preference number: 2 (lower is better)
Translates to: CVAGLRSLAFHPPHSPEVLQLHF*RFHAFD
Trigger: ATCAAAGGCATGAAACCTTCAGAAATGCAATTGCAA...CACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp GTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGGTAGAAACCTCTGAGTaGATGTCATTATCCTTTGCA +
Preference number: 2 (lower is better)
Translates to: VQHKRVLLGDHTPSFLPRVETSE*MSLSFA
Trigger: TGCAAAGGATAATGACATTCACTCAGAGGTTTCTAC...CCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR GCA 90 bp CCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCTTTATTCACCATCTCTaGTGGAAACGAGCCTCGGTT +
Preference number: 2 (lower is better)
Translates to: PTNHISTCSTMMPPSCQCFIHHL*WKRASV
Trigger: AACCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAA...GCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR GCA 90 bp AAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCATCTTAAGGAATGGTaGCAATTTCTGAAGGATGTC +
Preference number: 2 (lower is better)
Translates to: KLCTDLDWVSLKLCGRSAHLKEW*QFLKDV
Trigger: GACATCCTTCAGAAATTGGCACCATTCCTTAAGATG...CGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR GCA 90 bp CTTTCAGCCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGCATCTTAAGGAATGGTaGCAATTTCTGAAGGATGTC +
Preference number: 2 (lower is better)
Translates to: LSATSASVPHCLQQSCARHLKEW*QFLKDV
Trigger: GACATCCTTCAGAAATTGGCACCATTCCTTAAGATG...CCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGGCTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp TTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCCTTCAACCACTGATTTaGACTGGGGAATACGTTCTG +
Preference number: 2 (lower is better)
Translates to: LIHSSLSCAELACSSSVLLQPLI*TGEYVL
Trigger: CAGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAG...GAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACTTGCAATTGCATTTCTaGAGGTTTCATGCCTTTGAT +
Preference number: 2 (lower is better)
Translates to: GQFETVWQVCAPWHFIHHLQLHF*RFHAFD
Trigger: ATCAAAGGCATGAAACCTTCAGAAATGCAATTGCAA...GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp CAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTGTAGAAACCTCTGAGTaGATGTCATTATCCTTTGCA +
Preference number: 2 (lower is better)
Translates to: QHKRVLLGDHTPSFLPRFVETSE*MSLSFA
Trigger: TGCAAAGGATAATGACATTCACTCAGAGGTTTCTAC...AAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp ATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGGACTTCTCCATATACTaGAGAAAGCTGCACACCACA +
Preference number: 2 (lower is better)
Translates to: IHVQHKRVLLGDHTPSFLDFSIY*RKLHTT
Trigger: TGTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTC...CAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTAGCATCGATGGTTTCTTaGAGGGCCTGTAATCCCAGC +
Preference number: 2 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLASMVS*RACNPS
Trigger: GCTGGGATTACAGGCCCTTCAAGAAACCATCGATGC...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR-3UTR GCA 90 bp ATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGTTTATTCACCATCTCTaGTGGAAACGAGCCTCGGTT +
Preference number: 2 (lower is better)
Translates to: IHVQHKRVLLGDHTPSFLFIHHL*WKRASV
Trigger: AACCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAA...CAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR GCA 90 bp GCATCTCATACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGCATCTTAAGGAATGGTaGCAATTTCTGAAGGATGTC +
Preference number: 2 (lower is better)
Translates to: ASHTGESAEQVLACDAAKHLKEW*QFLKDV
Trigger: GACATCCTTCAGAAATTGGCACCATTCCTTAAGATG...CTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR GCA 90 bp AACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAACATTCTTCTTTGTCTTaGGCAGAACTGGCCTGCAGT +
Preference number: 2 (lower is better)
Translates to: NHISTCSTMMPPSCQCIEHSSLS*AELACS
Trigger: ACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATG...TTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp CCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCGATGAAAAGCATCGATaGTTTCTTGAAGGGCCTGTA +
Preference number: 2 (lower is better)
Translates to: PTNHISTCSTMMPPSCQCDEKHR*FLEGPV
Trigger: TACAGGCCCTTCAAGAAACCATCGATGCTTTTCATC...GCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR-3UTR TCA 90 bp AATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCTTCAACCACTGATTTaGACTGGGGAATACGTTCTG +
Preference number: 2 (lower is better)
Translates to: NANPGSNCEFRAYQAEFGLQPLI*TGEYVL
Trigger: CAGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAG...CCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp TCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATCCGAGCAGCTAGTTTaGGGATCTGTCCTTCTTTTA +
Preference number: 2 (lower is better)
Translates to: SINANPGSNCEFRAYQAESEQLV*GSVLLL
Trigger: TAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGA...TTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACTCCGAGCAGCTAGTTTaGGGATCTGTCCTTCTTTTA +
Preference number: 2 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYSEQLV*GSVLLL
Trigger: TAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGA...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAATTGAGCTGTAAGTCCTaGGACCTCCACACCATGGCT +
Preference number: 2 (lower is better)
Translates to: ATWRYIFQTVPGPTCERELSCKS*DLHTMA
Trigger: AGCCATGGTGTGGAGGTCTCAGGACTTACAGCTCAA...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
ENST00000546442.5
3UTR-3UTR TCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATTGAGCTGTAAGTCCTaGGACCTCCACACCATGGCT +
Preference number: 2 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTLSCKS*DLHTMA
Trigger: AGCCATGGTGTGGAGGTCTCAGGACTTACAGCTCAA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
ENST00000546442.5
3UTR-3UTR CCA 90 bp TGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTATTGCACTATTAGAATaGCTTGCTGCTGTAGATATA +
Preference number: 2 (lower is better)
Translates to: CLAQNWPAVPVFSLSQTPIALLE*LAAVDI
Trigger: TATATCTACAGCAGCAAGCCATTCTAATAGTGCAAT...AGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp ACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGAATTTCTTCAACCACTaGTTTGAACTGGGGAATACG +
Preference number: 2 (lower is better)
Translates to: TLVRTVNLEPTKLNLGTQNFFNH*FELGNT
Trigger: CGTATTCCCCAGTTCAAATCAGTGGTTGAAGAAATT...CTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp ATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGAGCAGTAGAAACCTCTaGGTGAATGTCATTATCCTT +
Preference number: 2 (lower is better)
Translates to: IHVQHKRVLLGDHTPSFLSSRNL*VNVIIL
Trigger: AAGGATAATGACATTCACTCAGAGGTTTCTACTGCT...CAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp CCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCTTCGTGTCAGTGCATTaGAAGGTTCTTTACATTTCA +
Preference number: 2 (lower is better)
Translates to: PTNHISTCSTMMPPSCQCFVSVH*KVLYIS
Trigger: TGAAATGTAAAGAACCTTTCAATGCACTGACACGAA...GCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAATTGAGCTGTAAGTCCTaGGACCTCCACACCATGGCT +
Preference number: 2 (lower is better)
Translates to: ILATWRYIFQTVPGPTCELSCKS*DLHTMA
Trigger: AGCCATGGTGTGGAGGTCTCAGGACTTACAGCTCAA...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
ENST00000546442.5
3UTR-3UTR TCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTCTCTTTGCGTTTAGCTaGAGAATGTGGGGTGGAAAG +
Preference number: 2 (lower is better)
Translates to: RLVLATQVVSSPERSSEILFAFS*RMWGGK
Trigger: CTTTCCACCCCACATTCTTCAGCTAAACGCAAAGAG...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR GCA 90 bp AACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAGTAGTTTCCCATTCTTaGATTCGTTTCTCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: NHISTCSTMMPPSCQCIEVVSHS*IRFSSS
Trigger: AGAGCTGGAGAAACGAATGCAAGAATGGGAAACTAC...TTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp AGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGACCACTGATTTGAACTaGGGAATACGTTCTGTCATG +
Preference number: 2 (lower is better)
Translates to: SISNKPHIHMLDNDASFVTTDLN*GIRSVM
Trigger: CATGACAGAACGTATTCCCCAGTTCAAATCAGTGGT...CACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR CAA 90 bp TCTTTAATAAGAGAGAAGCGGGTAAGGCTGTTTCACTGCTTCTCTTaGCGTTTAGCTGAAGAATGTGGGGTGGAAAGTGAATATGGTGAC +
Preference number: 2 (lower is better)
Translates to: SLIREKRVRLFHCFS*RLAEECGVESEYGD
Trigger: GTCACCATATTCACTTTCCACCCCACATTCTTCAGCTAAACGCAAAGAGAAGCAGTGAAACAGCCTTACCCGCTTCTCTCTTATTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR CAA 90 bp TATAAAACCCAAGACGCTTGTTCCCTAGAAGTTTACTTGCTCCGGTaGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCA +
Preference number: 2 (lower is better)
Translates to: YKTQDACSLEVYLLR*VLATQVVSSPERSS
Trigger: TGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCGGAGCAAGTAAACTTCTAGGGAACAAGCGTCTTGGGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR CAA 90 bp AAAGATACCTATAAAACCCAAGACGCTTGTTCCCTAGAAGTTTACTaGCTCCGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: KDTYKTQDACSLEVY*LRLVLATQVVSSPE
Trigger: TTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCGGAGCAAGTAAACTTCTAGGGAACAAGCGTCTTGGGTTTTATAGGTATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR TCA 90 bp AGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGGTAGAAACCTCTGAGTaGATGTCATTATCCTTTGCA +
Preference number: 2 (lower is better)
Translates to: SISNKPHIHMLDNDASFVVETSE*MSLSFA
Trigger: TGCAAAGGATAATGACATTCACTCAGAGGTTTCTAC...CACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp TTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTATTCACCATCTCTGCTaGAAACGAGCCTCGGTTTGC +
Preference number: 2 (lower is better)
Translates to: LHFIHIVTSLSRIHLGALIHHLC*KRASVC
Trigger: GCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT...AAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp TCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAAACAGCAACATGTTGTTaGATAAGAAAAGGTAGCGTT +
Preference number: 2 (lower is better)
Translates to: SINANPGSNCEFRAYQAETATCC*IRKGSV
Trigger: AACGCTACCTTTTCTTATTCAACAACATGTTGCTGT...TTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTACAAGTACAAAAGAGTaGAGAGCAGCCTTCATGACA +
Preference number: 2 (lower is better)
Translates to: RLVLATQVVSSPERSSEITSTKE*RAAFMT
Trigger: TGTCATGAAGGCTGCTCTTCACTCTTTTGTACTTGT...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR GCA 90 bp TTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTCATTCTTCTTTGTCTTaGGCAGAACTGGCCTGCAGT +
Preference number: 2 (lower is better)
Translates to: LHFIHIVTSLSRIHLGALHSSLS*AELACS
Trigger: ACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATG...AAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR CAA 90 bp TCTCTCTTTCCCAGACACCTGGAAAGTATGTGGATATTCTTCATTTaGAGTCTCTACAATTTTCATTCCATCAATGCCAACCCTGGTTCG +
Preference number: 2 (lower is better)
Translates to: SLFPRHLESMWIFFI*SLYNFHSINANPGS
Trigger: CGAACCAGGGTTGGCATTGATGGAATGAAAATTGTAGAGACTCAAAATGAAGAATATCCACATACTTTCCAGGTGTCTGGGAAAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp TGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACATTGCACTATTAGAATaGCTTGCTGCTGTAGATATA +
Preference number: 2 (lower is better)
Translates to: CLGITHQAFCQGFDFSIYIALLE*LAAVDI
Trigger: TATATCTACAGCAGCAAGCCATTCTAATAGTGCAAT...GTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp AGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGATTGCACTATTAGAATaGCTTGCTGCTGTAGATATA +
Preference number: 2 (lower is better)
Translates to: SISNKPHIHMLDNDASFVIALLE*LAAVDI
Trigger: TATATCTACAGCAGCAAGCCATTCTAATAGTGCAAT...CACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTTATGTCAGCAATAATTaGTTCACTTGCTCCTTTGGG +
Preference number: 2 (lower is better)
Translates to: RLVLATQVVSSPERSSEIYVSNN*FTCSFG
Trigger: CCCAAAGGAGCAAGTGAACCAATTATTGCTGACATA...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR TCA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTAACAGCAACATGTTGTTaGATAAGAAAAGGTAGCGTT +
Preference number: 2 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLTATCC*IRKGSV
Trigger: AACGCTACCTTTTCTTATTCAACAACATGTTGCTGT...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGACTTTATCGGTAGAATaGCTCTGCACACTAATTTCA +
Preference number: 2 (lower is better)
Translates to: WQHGGISFKLFQVLHVKETLSVE*LCTLIS
Trigger: TGAAATTAGTGTGCAGAGTCATTCTACCGATAAAGT...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
ENST00000546442.5
3UTR-3UTR TCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGGGTGACAGAATCAATTaGTACACCATTTCTTCAAGA +
Preference number: 2 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEGDRIN*YTISSR
Trigger: TCTTGAAGAAATGGTGTATCAATTGATTCTGTCACC...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
ENST00000546442.5
3UTR-3UTR TCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTAAGTTTGGGTTTTGGTaGAAATGTTTGTACATGCTG +
Preference number: 2 (lower is better)
Translates to: RLVLATQVVSSPERSSEIKFGFW*KCLYML
Trigger: CAGCATGTACAAACATTTTCACCAAAACCCAAACTT...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR TCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTACAAGTACAAAAGAGTaGAGAGCAGCCTTCATGACA +
Preference number: 2 (lower is better)
Translates to: ELRPTGNVGFNGKATNDITSTKE*RAAFMT
Trigger: TGTCATGAAGGCTGCTCTTCACTCTTTTGTACTTGT...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR GCA 90 bp ACTGATTTGAACTGGGGAATACGTTCTGTCATGTTTTTAACCAATTCCATTGCATTTATTCACCATCTCTaGTGGAAACGAGCCTCGGTT +
Preference number: 2 (lower is better)
Translates to: TDLNWGIRSVMFLTNSIAFIHHL*WKRASV
Trigger: AACCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAA...TGCAATGGAATTGGTTAAAAACATGACAGAACGTATTCCCCAGTTCAAATCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR GCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTAATAATTGGTTCACTTaGTCCTTTGGGGTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: RLVLATQVVSSPERSSEINNWFT*SFGVEK
Trigger: TTTTTCCACCCCAAAGGAGCAAGTGAACCAATTATT...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR GCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTGTAAGGCTGTTTCACTaGTTCTCTTTGCGTTTAGCT +
Preference number: 2 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIVRLFH*FSLRLA
Trigger: AGCTAAACGCAAAGAGAAGCAGTGAAACAGCCTTAC...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR TCA 90 bp ACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTCTTACAGGTTCTAGCATGTaGTGCTGCAAAGTTAAGCTC +
Preference number: 2 (lower is better)
Translates to: TTLFPDTSADSISKIPFLTGSSM*CCKVKL
Trigger: GAGCTTAACTTTGCAGCATCACATGCTAGAACCTGT...AAGAAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
3UTR-3UTR TCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGACTTTATCGGTAGAATaGCTCTGCACACTAATTTCA +
Preference number: 2 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVTLSVE*LCTLIS
Trigger: TGAAATTAGTGTGCAGAGTCATTCTACCGATAAAGT...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
ENST00000546442.5
3UTR-3UTR CCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTTATGTCAGCAATAATTaGTTCACTTGCTCCTTTGGG +
Preference number: 2 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIYVSNN*FTCSFG
Trigger: CCCAAAGGAGCAAGTGAACCAATTATTGCTGACATA...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR CCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTCTGATAATCCTTTTATaGAGGAAGGGAACCTATTAT +
Preference number: 2 (lower is better)
Translates to: RLVLATQVVSSPERSSEILIILL*RKGTYY
Trigger: ATAATAGGTTCCCTTCCTCCATAAAAGGATTATCAG...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR TCA 90 bp TTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTGCAATTGCATTTCTaGAGGTTTCATGCCTTTGAT +
Preference number: 2 (lower is better)
Translates to: LHFIHIVTSLSRIHLGALLQLHF*RFHAFD
Trigger: ATCAAAGGCATGAAACCTTCAGAAATGCAATTGCAA...AAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR TCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTGGTGACAGAATCAATTaGTACACCATTTCTTCAAGA +
Preference number: 2 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIGDRIN*YTISSR
Trigger: TCTTGAAGAAATGGTGTATCAATTGATTCTGTCACC...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR TCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAGGTGACAGAATCAATTaGTACACCATTTCTTCAAGA +
Preference number: 2 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEGDRIN*YTISSR
Trigger: TCTTGAAGAAATGGTGTATCAATTGATTCTGTCACC...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
ENST00000546442.5
3UTR-3UTR GCA 90 bp ACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTCTTTTTTCATTCCATCAATaGCAACCCTGGTTCGAACTG +
Preference number: 2 (lower is better)
Translates to: TTLFPDTSADSISKIPFLFSFHQ*QPWFEL
Trigger: CAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAA...AAGAAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
3UTR-3UTR TCA 90 bp CACACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTACTTTATCGGTAGAATaGCTCTGCACACTAATTTCA +
Preference number: 2 (lower is better)
Translates to: HTTLFPDTSADSISKIPFTLSVE*LCTLIS
Trigger: TGAAATTAGTGTGCAGAGTCATTCTACCGATAAAGT...AAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551984.5
3UTR-3UTR GCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTCACAAATATATCCCATaGCACATAAATTACCGCTTA +
Preference number: 2 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIHKYIP*HINYRL
Trigger: TAAGCGGTAATTTATGTGGCATGGGATATATTTGTG...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR CAA 90 bp ATGATCCACTACAGATGTCAATACAGTCTGAAGAATAGGAACTGGTaGGCCACAGTTCATATACTAATACATTCTTGGAGAATACAAAAT +
Preference number: 2 (lower is better)
Translates to: MIHYRCQYSLKNRNW*ATVHILIHSWRIQN
Trigger: ATTTTGTATTCTCCAAGAATGTATTAGTATATGAACTGTGGCCAACCAGTTCCTATTCTTCAGACTGTATTGACATCTGTAGTGGATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR TCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAATGGTACATTAAAAAGTaGCAATGTTTGGGGTATGAC +
Preference number: 2 (lower is better)
Translates to: INLPIGPYITIVLVTLTKWYIKK*QCLGYD
Trigger: GTCATACCCCAAACATTGTCACTTTTTAATGTACCA...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR CCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATCTGTATTTTTCACCATaGATCTATTTTGGCAACATG +
Preference number: 2 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYLYFSP*IYFGNM
Trigger: CATGTTGCCAAAATAGATCCATGGTGAAAAATACAG...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR CCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAACTGTATTTTTCACCATaGATCTATTTTGGCAACATG +
Preference number: 2 (lower is better)
Translates to: INLPIGPYITIVLVTLTKLYFSP*IYFGNM
Trigger: CATGTTGCCAAAATAGATCCATGGTGAAAAATACAG...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR CAA 90 bp TTCATCCACCACATAGCCCAGAAGTGGAATGGTGGCCTGGGCTCTGACGTCCTGACAAGAGGGTCTTGCTaGGGGATCACACACCAAGCT +
Preference number: 3 (lower is better)
Translates to: FIHHIAQKWNGGLGSDVLTRGSC*GITHQA
Trigger: AGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGT...CAGGACGTCAGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp CACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCCATTCTTCTTTGTCTaGCGCAGAACTGGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: HGLRLGQFETVWQVCAPWPFFFV*RRTGLQ
Trigger: CTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGG...CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR CCA 72 bp GTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTaGCAGGTCTGCGCTCCTTGGCATTTCATCCACCAC +
Preference number: 3 (lower is better)
Translates to: VHGLRLGQFETV*QVCAPWHFIHH
Trigger: GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR TCA 72 bp GTAAGAAGAGCTGGGAATGTCTTGAGCTGTAAGTCCTaGGACCTCCACACCATGGCTGGTCCTGGAGGAGTT +
Preference number: 3 (lower is better)
Translates to: VRRAGNVLSCKS*DLHTMAGPGGV
Trigger: AACTCCTCCAGGACCAGCCATGGTGTGGAGGTCTCAGGACTTACAGCTCAAGACATTCCCAGCTCTTCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
3UTR GCA 72 bp GACTTTCAGCCACTTCTGCTTCAGTTCCTCACTGTCTaGAGCAAAGCTGTGCACGGACTTAGACTGGGTCAG +
Preference number: 3 (lower is better)
Translates to: DFQPLLLQFLTV*SKAVHGLRLGQ
Trigger: CTGACCCAGTCTAAGTCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGGCTGAAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp AGCAAAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCCCATTCTTCTTTGTCTaGCGCAGAACTGGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: SKAVHGLRLGQFETVWQVPFFFV*RRTGLQ
Trigger: CTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGG...GACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp TTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCAAGGCAGGCAGATCGCTaGAGCTCAGGAGTTCGAGAT +
Preference number: 3 (lower is better)
Translates to: LDWVSLKLCGRSALLGISRQADR*SSGVRD
Trigger: ATCTCGAACTCCTGAGCTCAAGCGATCTGCCTGCCT...TGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR-3UTR CAA 90 bp TTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCACCATTCTTCTTTGTCTaGCGCAGAACTGGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: LDWVSLKLCGRSALLGISPFFFV*RRTGLQ
Trigger: CTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGG...TGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp CCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGACTTAGATCTTCCTTCATACACTaGCTCACTCTCGCTTGCCAC +
Preference number: 3 (lower is better)
Translates to: PLLLQFLTVCSKAVHGLRSSFIH*LTLACH
Trigger: GTGGCAAGCGAGAGTGAGCAAGTGTATGAAGGAAGA...TCTAAGTCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR GCA 72 bp GACAGTTCTTCCTTCATACACTTGCTCACTCTCGCTTaGCACCATGTAAGATGTGCCTCTTCCCCTTCTGCC +
Preference number: 3 (lower is better)
Translates to: DSSSFIHLLTLA*HHVRCASSPSA
Trigger: GGCAGAAGGGGAAGAGGCACATCTTACATGGTGGCAAGCGAGAGTGAGCAAGTGTATGAAGGAAGAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR CCA 72 bp GCATCTGTCCCTTCAGACAGATGTGGTTTAGATACCTaGGGGGCACCATACATGTACAGCACAAGAGGGTCT +
Preference number: 3 (lower is better)
Translates to: ASVPSDRCGLDT*GAPYMYSTRGS
Trigger: AGACCCTCTTGTGCTGTACATGTATGGTGCCCCCCAGGTATCTAAACCACATCTGTCTGAAGGGACAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395740.5
3UTR CCA 72 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTaGCATTTCATCCACCACATAGCCCAGAAGTGGAAT +
Preference number: 3 (lower is better)
Translates to: GQFETVWQVCAP*HFIHHIAQKWN
Trigger: ATTCCACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp CCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGACTTAGATTGATCCATTCTTCTTaGTCTTGCGCAGAACTGGCC +
Preference number: 3 (lower is better)
Translates to: PLLLQFLTVCSKAVHGLRLIHSS*SCAELA
Trigger: GGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA...TCTAAGTCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp CCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCAGCATCGATGGTTTCTaGAAGGGCCTTGATCCATTC +
Preference number: 3 (lower is better)
Translates to: PTNHISTCSTMMPPSCQCSIDGF*KGLDPF
Trigger: GAATGGATCAAGGCCCTTCAAGAAACCATCGATGCT...GCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
3UTR-3UTR CAA 90 bp TCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACCTGTGACAGCTCTTCGTGTCAGTGCATaGAAAGGTTCTTTACATTTC +
Preference number: 3 (lower is better)
Translates to: SKVAGCSFGPPGVSPVTALRVSA*KGSLHF
Trigger: GAAATGTAAAGAACCTTTCAATGCACTGACACGAAG...AGCTGTCACAGGTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
3UTR GCA 72 bp ACACTTGCTCACTCTCGCTTGCCACCATGTAAGATGTaGCTCTTCCCCTTCTGCCATGATTGTACGTTTTCT +
Preference number: 3 (lower is better)
Translates to: TLAHSRLPPCKM*LFPFCHDCTFS
Trigger: AGAAAACGTACAATCATGGCAGAAGGGGAAGAGGCACATCTTACATGGTGGCAAGCGAGAGTGAGCAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR GCA 72 bp TTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTaGACGGACTTAGACTGGGTCAGTTTGAAACTGTGT +
Preference number: 3 (lower is better)
Translates to: FCFSSSLSAAKL*TDLDWVSLKLC
Trigger: ACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp ATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGTTGATCCATTCTTCTTaGTCTTGCGCAGAACTGGCC +
Preference number: 3 (lower is better)
Translates to: IHVQHKRVLLGDHTPSFLLIHSS*SCAELA
Trigger: GGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA...CAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp ATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGAGTAGTTTCCCATTCTaGCATTCGTTTCTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: IHVQHKRVLLGDHTPSFLSSFPF*HSFLQL
Trigger: GAGCTGGAGAAACGAATGCAAGAATGGGAAACTACT...CAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp AGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTTGATCCATTCTTCTTaGTCTTGCGCAGAACTGGCC +
Preference number: 3 (lower is better)
Translates to: SISNKPHIHMLDNDASFVLIHSS*SCAELA
Trigger: GGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA...CACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp AGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCTTTCTGCCAAGGTTTaGACTTCTCCATATACTGAA +
Preference number: 3 (lower is better)
Translates to: RLGQFETVWQVCAPWHFILSAKV*TSPYTE
Trigger: TTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAG...GATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp TGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACAGTAGTTTCCCATTCTaGCATTCGTTTCTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: CLGITHQAFCQGFDFSIYSSFPF*HSFLQL
Trigger: GAGCTGGAGAAACGAATGCAAGAATGGGAAACTACT...GTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp TCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCCACAGATTTAGTAGTTTCCCATTCTaGCATTCGTTTCTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: SAEQVLACDAAKLSSHRFSSFPF*HSFLQL
Trigger: GAGCTGGAGAAACGAATGCAAGAATGGGAAACTACT...AAATCTGTGGGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCTTCAACCACTGATTaGAACTGGGGAATACGTTCT +
Preference number: 3 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPSSTTD*NWGIRS
Trigger: AGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAGA...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp TTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCACTTTCTGCCAAGGTTTaGACTTCTCCATATACTGAA +
Preference number: 3 (lower is better)
Translates to: LDWVSLKLCGRSALLGISLSAKV*TSPYTE
Trigger: TTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAG...TGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR TCA 72 bp AAAGCTGCACACCACACTGTTTCCAGATACTTCTGCTaGTTCAATCTGATAGGAGGTAACTGGATCATGGGG +
Preference number: 3 (lower is better)
Translates to: KAAHHTVSRYFC*FNLIGGNWIMG
Trigger: CCCCATGATCCAGTTACCTCCTATCAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGTGTGCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR-3UTR CAA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTGACCCACAGGGAACGTaGGTTTTAATGGGAAAGCAA +
Preference number: 3 (lower is better)
Translates to: RLVLATQVVSSPERSSEIDPQGT*VLMGKQ
Trigger: TTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTC...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR TCA 72 bp CATTTCCAACAAACCACATATCCACATGCTCGACAATaGTGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCT +
Preference number: 3 (lower is better)
Translates to: HFQQTTYPHARQ*CLLRVSALKGS
Trigger: AGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR GCA 72 bp TCTTTAATAAGAGAGAAGCGGGTAAGGCTGTTTCACTaGTTCTCTTTGCGTTTAGCTGAAGAATGTGGGGTG +
Preference number: 3 (lower is better)
Translates to: SLIREKRVRLFH*FSLRLAEECGV
Trigger: CACCCCACATTCTTCAGCTAAACGCAAAGAGAAGCAGTGAAACAGCCTTACCCGCTTCTCTCTTATTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR TCA 72 bp CAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACTaGAGAAAGCTGCACACCACACTGTTTCCAGATACT +
Preference number: 3 (lower is better)
Translates to: QAFCQGFDFSIY*RKLHTTLFPDT
Trigger: AGTATCTGGAAACAGTGTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR TCA 72 bp CATGCTGTTCTCGTGATCGTGAGTTCTCATGAGATCTaGTGGTTTTGTAAGTGTCTGACAGTTCTTCCTTCA +
Preference number: 3 (lower is better)
Translates to: HAVLVIVSSHEI*WFCKCLTVLPS
Trigger: TGAAGGAAGAACTGTCAGACACTTACAAAACCATCAGATCTCATGAGAACTCACGATCACGAGAACAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR GCA 72 bp TCTTTAATAAGAGAGAAGCGGGTAAGGCTGTTTCACTaGTTCTCTTTGCGTTTAGCTGTGACAGCTAAAAGG +
Preference number: 3 (lower is better)
Translates to: SLIREKRVRLFH*FSLRLAVTAKR
Trigger: CCTTTTAGCTGTCACAGCTAAACGCAAAGAGAAGCAGTGAAACAGCCTTACCCGCTTCTCTCTTATTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR-3UTR CAA 90 bp TTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAATCTTCAACCACTGATTaGAACTGGGGAATACGTTCT +
Preference number: 3 (lower is better)
Translates to: FHSINANPGSNCEFRAYQSSTTD*NWGIRS
Trigger: AGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAGA...TTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR-3UTR CAA 90 bp ACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTCTTCCATTCTTCTTTGTCTaGCGCAGAACTGGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: TTLFPDTSADSISKIPFLPFFFV*RRTGLQ
Trigger: CTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGG...AAGAAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
3UTR-3UTR CAA 90 bp TTCTTTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTTGATCCATTCTTCTTaGTCTTGCGCAGAACTGGCC +
Preference number: 3 (lower is better)
Translates to: FFTFHTHCHFIISDPSWGLIHSS*SCAELA
Trigger: GGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA...GCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR GCA 72 bp TTTATTCACCATCTCTGCTGGAAACGAGCCTCGGTTTaGTTCTTCCAACAGTTTGCAATAAAATACCTGATC +
Preference number: 3 (lower is better)
Translates to: FIHHLCWKRASV*FFQQFAIKYLI
Trigger: GATCAGGTATTTTATTGCAAACTGTTGGAAGAAGCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551984.5
3UTR-3UTR CAA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTTATCACATGTGGATTTaGTTTCATTCCGACAAAGGA +
Preference number: 3 (lower is better)
Translates to: RLVLATQVVSSPERSSEIYHMWI*FHSDKG
Trigger: TCCTTTGTCGGAATGAAACAAAATCCACATGTGATA...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR TCA 72 bp ATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCATTaGAAGGTTCTTTACATTTCATACACATTGTCACTT +
Preference number: 3 (lower is better)
Translates to: MLDNDASFVSVH*KVLYISYTLSL
Trigger: AAGTGACAATGTGTATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR TCA 72 bp CTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATaGAAGGATTTCTTAAATGGAAGTGCTCATTCTAAC +
Preference number: 3 (lower is better)
Translates to: LFQVLHVKEKKT*KDFLNGSAHSN
Trigger: GTTAGAATGAGCACTTCCATTTAAGAAATCCTTTCATGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
ENST00000546442.5
3UTR CCA 72 bp CACTACAGATGTCAATACAGTCTGAAGAATAGGAACTaGTTGGCCACAGTTCATATACTAATACATTCTTGG +
Preference number: 3 (lower is better)
Translates to: HYRCQYSLKNRN*LATVHILIHSW
Trigger: CCAAGAATGTATTAGTATATGAACTGTGGCCAACCAGTTCCTATTCTTCAGACTGTATTGACATCTGTAGTG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR CAA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATATAACCTGTATGACTTaGACTGTCCCAGTGACCAAA +
Preference number: 3 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYITCMT*TVPVTK
Trigger: TTTGGTCACTGGGACAGTCAAAGTCATACAGGTTAT...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR-3UTR CAA 90 bp ACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTCTTCTTCGTGTCAGTGCATaGAAAGGTTCTTTACATTTC +
Preference number: 3 (lower is better)
Translates to: TTLFPDTSADSISKIPFLLRVSA*KGSLHF
Trigger: GAAATGTAAAGAACCTTTCAATGCACTGACACGAAG...AAGAAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp AACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAACAGCACAGGCTCCCCTaGTTTCCCCACTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NCVAGLRSLAFHPPHSPEQHRLP*FPHFPA
Trigger: GGCTGGGAAGTGGGGAAAGCAGGGGAGCCTGTGCTG...TTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp TTCATCCACCACATAGCCCAGAAGTGGAATGGTGGCCTGGGCTCTGACGTCCTGTGGGCTCTGACGTCCTaGGGGGCACCATACATGTAC +
Preference number: 4 (lower is better)
Translates to: FIHHIAQKWNGGLGSDVLWALTS*GAPYMY
Trigger: GTACATGTATGGTGCCCCCCAGGACGTCAGAGCCCA...CAGGACGTCAGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp CTTTCAGCCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGAGTGGAATGGTGGCCTaGGCTCTGACGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LSATSASVPHCLQQSCARSGMVA*ALTSWG
Trigger: CCCCCAGGACGTCAGAGCCCAGGCCACCATTCCACT...CCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGGCTGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp AAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGAGTGGAATGGTGGCCTaGGCTCTGACGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KLCTDLDWVSLKLCGRSASGMVA*ALTSWG
Trigger: CCCCCAGGACGTCAGAGCCCAGGCCACCATTCCACT...CGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTCAGCACAGGCTCCCCTaGTTTCCCCACTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QHKRVLLGDHTPSFLPRFQHRLP*FPHFPA
Trigger: GGCTGGGAAGTGGGGAAAGCAGGGGAGCCTGTGCTG...AAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp TCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCACAGCACAGGCTCCCCTaGTTTCCCCACTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SSLSCAELACSSSVLSFPQHRLP*FPHFPA
Trigger: GGCTGGGAAGTGGGGAAAGCAGGGGAGCCTGTGCTG...TGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACTGGTGCTGGTCCAGCTaGTCCAGTTCCAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: GQFETVWQVCAPWHFIHHWCWSS*SSSRGL
Trigger: AAGCCCTCTGGAACTGGAGCAGCTGGACCAGCACCA...GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000494977.1
CDS-3UTR GCA 90 bp TTCATCCACCACATAGCCCAGAAGTGGAATGGTGGCCTGGGCTCTGACGTCCTGACTGTGTGGCAGGTCTaGGCTCCTTGGCATTTCATC +
Preference number: 4 (lower is better)
Translates to: FIHHIAQKWNGGLGSDVLTVWQV*APWHFI
Trigger: GATGAAATGCCAAGGAGCGCAGACCTGCCACACAGT...CAGGACGTCAGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp ACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCGCTGTCTGTTGTGGGTaGTGCAGGAGCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: TGESAEQVLACDAAKLSSAVCCG*CRSCGS
Trigger: ACTGCCACAGCTCCTGCATCACCCACAACAGACAGC...GGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR TCA 90 bp CACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCCACATGCTCGACAATaGTGCCTCCTTCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: HGLRLGQFETVWQVCAPWPHARQ*CLLRVS
Trigger: ACTGACACGAAGGAGGCATCATTGTCGAGCATGTGG...CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGACTTAGATGGTGCTGGTCCAGCTaGTCCAGTTCCAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PLLLQFLTVCSKAVHGLRWCWSS*SSSRGL
Trigger: AAGCCCTCTGGAACTGGAGCAGCTGGACCAGCACCA...TCTAAGTCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000494977.1
CDS-3UTR GCA 90 bp CTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTGGACAGTTCCTCACTGTCTaGAGCAAAGCTGTGCACGGA +
Preference number: 4 (lower is better)
Translates to: LAQNWPAVPVFSLSQTPGQFLTV*SKAVHG
Trigger: TCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTG...TCCAGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp TCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACCTGTGACAGCTTCCAAGGTGGCTGGATaGTCATTTGGACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: SKVAGCSFGPPGVSPVTASKVAG*SFGPPG
Trigger: ACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGA...AGCTGTCACAGGTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGCCTCGTCGCTCATCCTaGCGGGCTCGACCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEPRRSS*RARPPL
Trigger: GAGCGGCGGTCGAGCCCGGCAGGATGAGCGACGAGG...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp TGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTGTCTCCTTCATCTCATaGTGCTGGTCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CLAQNWPAVPVFSLSQTPVSFIS*CWSSCS
Trigger: GGAGCAGCTGGACCAGCACCATGAGATGAAGGAGAC...AGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
CDS-3UTR CCA 90 bp TGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAAGTGTGTCTTGCGCAGAACTaGCCTGCAGTTCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: CVAGLRSLAFHPPHSPEVCLAQN*PAVPVF
Trigger: GAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA...CACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp ATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCAGTGGAATGGTGGCCTaGGCTCTGACGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: MPTLVRTVNLEPTKLNLGSGMVA*ALTSWG
Trigger: CCCCCAGGACGTCAGAGCCCAGGCCACCATTCCACT...GCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp TGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTCACATAGCCCAGAAGTaGAATGGTGGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: CLAQNWPAVPVFSLSQTPHIAQK*NGGLGS
Trigger: AGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTG...AGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp CAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTCCTCCACACCATGGCTaGTCCTGGAGGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: QHKRVLLGDHTPSFLPRFPPHHG*SWRSSA
Trigger: TGCTGAACTCCTCCAGGACCAGCCATGGTGTGGAGG...AAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp CACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCTGATAGGAGGTAACTaGATCATGGGGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: HGLRLGQFETVWQVCAPWLIGGN*IMGAVS
Trigger: GGACACTGCCCCCATGATCCAGTTACCTCCTATCAG...CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR CCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTGCGTCGCGGCGAGTTTaGCTGCGGCGACTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEIASRRV*LRRLLR
Trigger: CCGCAGGAGTCGCCGCAGCCAAACTCGCCGCGACGC...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp CCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCGCTGTCTGTTGTGGGTaGTGCAGGAGCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: PTNHISTCSTMMPPSCQCAVCCG*CRSCGS
Trigger: ACTGCCACAGCTCCTGCATCACCCACAACAGACAGC...GCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR TCA 90 bp AACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAATTGAGCTGTAAGTCCTaGGACCTCCACACCATGGCT +
Preference number: 4 (lower is better)
Translates to: NCVAGLRSLAFHPPHSPELSCKS*DLHTMA
Trigger: AGCCATGGTGTGGAGGTCTCAGGACTTACAGCTCAA...TTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp GTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGGCATCGATGGTTTCTTaGAGGGCCTGTAATCCCAGC +
Preference number: 4 (lower is better)
Translates to: VQHKRVLLGDHTPSFLPRASMVS*RACNPS
Trigger: GCTGGGATTACAGGCCCTTCAAGAAACCATCGATGC...CCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR GCA 90 bp GAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCGTTTAACTGCCCAGCACAGGCTCCCCTaGTTTCCCCACTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: EHRGNANQQPELENRLTAQHRLP*FPHFPA
Trigger: GGCTGGGAAGTGGGGAAAGCAGGGGAGCCTGTGCTG...GGCAGTTAAACGATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp GTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGCCAGTGTGGTTGTGCTaGTTGTGGAGCAAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: VQHKRVLLGDHTPSFLPRPVWLC*LWSKVE
Trigger: TTCCACCTTGCTCCACAAGCAGCACAACCACACTGG...CCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp CGCTTCCCCTTGCCCCCAAGGGCATCTGTCCCTTCAGACAGATGTGGTTTAGATCATCTGGTTTTGTGCTaGCATTACACCGTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RFPLPPRASVPSDRCGLDHLVLC*HYTVGH
Trigger: GTGGCCAACGGTGTAATGGCAGCACAAAACCAGATG...ATCTAAACCACATCTGTCTGAAGGGACAGATGCCCTTGGGGGCAAGGGGAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395740.5
CDS-3UTR GCA 90 bp CAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTGGTGCTGGTCCAGCTaGTCCAGTTCCAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: QEGLAWGSHTKLSAKVLTWCWSS*SSSRGL
Trigger: AAGCCCTCTGGAACTGGAGCAGCTGGACCAGCACCA...AGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
CDS-3UTR GCA 90 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACTGCGCAGAACTGGCCTaGAGTTCCAGTGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: GQFETVWQVCAPWHFIHHCAELA*SSSVLS
Trigger: AGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCA...GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTGGAAGCACAAGAGGGTCTTaGTTGGGGATCACACACCAA +
Preference number: 4 (lower is better)
Translates to: LAQNWPAVPVFSLSQTPGSTRGS*LGITHQ
Trigger: TTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCT...TCCAGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp CTTTCAGCCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGCTGCCATTACACCGTTaGCCACACAAGTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LSATSASVPHCLQQSCARLPLHR*PHKSVH
Trigger: GTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAG...CCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGGCTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493087.5
CDS-3UTR CCA 90 bp GCATCTCATACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGCACTGGGCCTATGCCTaGAGTCCTGTAGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: ASHTGESAEQVLACDAAKHWAYA*SPVATV
Trigger: GACAGTAGCTACAGGACTCCAGGCATAGGCCCAGTG...CTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CCA 90 bp AAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGTTCATCTCATGGTGCTaGTCCAGCTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KLCTDLDWVSLKLCGRSAFISWC*SSCSSS
Trigger: GGAACTGGAGCAGCTGGACCAGCACCATGAGATGAA...CGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000494977.1
CDS-3UTR CCA 90 bp GGCCTTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTGTCTCCTTCATCTCATaGTGCTGGTCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLDPFFFVLRRTGLQFQCVSFIS*CWSSCS
Trigger: GGAGCAGCTGGACCAGCACCATGAGATGAAGGAGAC...ACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CCA 90 bp AAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGAGTTCGAGATCAGCCTaGGCAGCATGGCAAAACCTC +
Preference number: 4 (lower is better)
Translates to: KLCTDLDWVSLKLCGRSASSRSA*AAWQNL
Trigger: GAGGTTTTGCCATGCTGCCCAGGCTGATCTCGAACT...CGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR GCA 90 bp ACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCCAACCAGTGTGGTTGTaGTGCTTGTGGAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: TGESAEQVLACDAAKLSSQPVWL*CLWSKV
Trigger: CACCTTGCTCCACAAGCAGCACAACCACACTGGTTG...GGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp TTCATCCACCACATAGCCCAGAAGTGGAATGGTGGCCTGGGCTCTGACGTCCTGGACGAAGGTGAATTCTaGAGGTGTAATGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: FIHHIAQKWNGGLGSDVLDEGEF*RCNGFG
Trigger: TCCAAAGCCATTACACCTGCAGAATTCACCTTCGTC...CAGGACGTCAGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp CAGGATGATCATCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACCATCTGGTTTTGTGCTaGCATTACACCGTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QDDHPRWLDAHLDHLVSHHLVLC*HYTVGH
Trigger: GTGGCCAACGGTGTAATGGCAGCACAAAACCAGATG...GTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGATGATCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493087.5
CDS-3UTR GCA 90 bp CTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTGGATTCCATCTGGTTTTGTaGTGCCATTACACCGTTGGC +
Preference number: 4 (lower is better)
Translates to: LAQNWPAVPVFSLSQTPGFHLVL*CHYTVG
Trigger: GCCAACGGTGTAATGGCAGCACAAAACCAGATGGAA...TCCAGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR GCA 90 bp GTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAAGTGGAACCACATATCCACATaGTCGACAATGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VWQVCAPWHFIHHIAQKWNHIST*STMMPP
Trigger: AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT...CCACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp GGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCACTGTGTGGCAGGTCTaGGCTCCTTGGCATTTCATC +
Preference number: 4 (lower is better)
Translates to: GSCLGITHQAFCQGFDFSTVWQV*APWHFI
Trigger: GATGAAATGCCAAGGAGCGCAGACCTGCCACACAGT...GGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp AGCAAAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCACTGTGTGGCAGGTCTaGGCTCCTTGGCATTTCATC +
Preference number: 4 (lower is better)
Translates to: SKAVHGLRLGQFETVWQVTVWQV*APWHFI
Trigger: GATGAAATGCCAAGGAGCGCAGACCTGCCACACAGT...GACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp GGCCTTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTGCAGCAAAGCTGTaGACGGACTTAGACTGGGTC +
Preference number: 4 (lower is better)
Translates to: GLDPFFFVLRRTGLQFQCSAAKL*TDLDWV
Trigger: GACCCAGTCTAAGTCCGTGCACAGCTTTGCTGCAGA...ACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp AACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAACCACCATGTAAGATGTaGCTCTTCCCCTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: NCVAGLRSLAFHPPHSPEPPCKM*LFPFCH
Trigger: ATGGCAGAAGGGGAAGAGGCACATCTTACATGGTGG...TTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR GCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAGGCTGCGGCGACTCCTaGGGCAGTCGCAGCGTCTCG +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEGCGDS*GSRSVS
Trigger: CGAGACGCTGCGACTGCCGCAGGAGTCGCCGCAGCC...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGGGGGCGCCCTCTACTaGGGCGTCTCCTCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREGGALY*GVSSAS
Trigger: ACTCGCTGAGGAGACGCCGCAGTAGAGGGCGCCCCC...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTGGGGCGTCGCCTGCATaGCCAGGTTCGGCGCGACTC +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIGASPA*PGSARL
Trigger: GAGTCGCGCCGAACCTGGGCATGCAGGCGACGCCCC...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp AGCAAAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTCTCACCAACCAGTGTaGTTGTGCTGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SKAVHGLRLGQFETVWQVSHQPV*LCCLWS
Trigger: GCTCCACAAGCAGCACAACCACACTGGTTGGTGAGA...GACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp AGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCTCTCACCAACCAGTGTaGTTGTGCTGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RLGQFETVWQVCAPWHFISHQPV*LCCLWS
Trigger: GCTCCACAAGCAGCACAACCACACTGGTTGGTGAGA...GATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp CCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCCACTGGGCCTATGCCTaGAGTCCTGTAGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: PTNHISTCSTMMPPSCQCHWAYA*SPVATV
Trigger: GACAGTAGCTACAGGACTCCAGGCATAGGCCCAGTG...GCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CCA 90 bp GTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGCCCTCTCTTGTACCTTaGTTTCTGTTTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VQHKRVLLGDHTPSFLPRPSLVP*FLFLPL
Trigger: GAGGGGCAGAAACAGAAACCAAGGTACAAGAGAGGG...CCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CCA 90 bp CCATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCGTCTCCTTCATCTCATaGTGCTGGTCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PYMYSTRGSCLGITHQAFVSFIS*CWSSCS
Trigger: GGAGCAGCTGGACCAGCACCATGAGATGAAGGAGAC...GAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
CDS-3UTR CCA 90 bp GGCCTTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTGTCTTGCGCAGAACTaGCCTGCAGTTCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: GLDPFFFVLRRTGLQFQCCLAQN*PAVPVF
Trigger: GAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA...ACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp CAGGATGATCATCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACCAAGAGGGTCTTGCTTaGGGATCACACACCAAGCTT +
Preference number: 4 (lower is better)
Translates to: QDDHPRWLDAHLDHLVSHQEGLA*GSHTKL
Trigger: AAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG...GTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGATGATCATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp TTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTGGGCTCTGACGTCCTaGGGGGCACCATACATGTAC +
Preference number: 4 (lower is better)
Translates to: LIHSSLSCAELACSSSVLWALTS*GAPYMY
Trigger: GTACATGTATGGTGCCCCCCAGGACGTCAGAGCCCA...GAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp GGCCTTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTCTCATTTGGACCACCTaGTGTCTCACCTGTGACAGC +
Preference number: 4 (lower is better)
Translates to: GLDPFFFVLRRTGLQFQCLIWTT*CLTCDS
Trigger: GCTGTCACAGGTGAGACACCAGGTGGTCCAAATGAG...ACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTGAGACCTCCACACCATaGCTGGTCCTGGAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPETSTP*LVLEEF
Trigger: GAACTCCTCCAGGACCAGCCATGGTGTGGAGGTCTC...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp GGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCCTTTGGACTTGCAGCTaGGTGTTTTGCTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GSCLGITHQAFCQGFDFSLWTCS*VFCWPV
Trigger: AACAGGCCAGCAAAACACTCAGCTGCAAGTCCAAAG...GGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp CTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTGGAACTGGGTTTTTCTTTTaGGACACAAGAAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LAQNWPAVPVFSLSQTPGTGFFF*DTRSRG
Trigger: GCCTCTGCTTCTTGTGTCTCAAAAGAAAAACCCAGT...TCCAGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp TTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCACCACATGCTCGACAATaGTGCCTCCTTCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LDWVSLKLCGRSALLGISPHARQ*CLLRVS
Trigger: ACTGACACGAAGGAGGCATCATTGTCGAGCATGTGG...TGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp GTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTCTTAGGTTCAGGATaGTCATCCAAGGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VQHKRVLLGDHTPSFLPRFLGSG*SSKVAG
Trigger: TCCAGCCACCTTGGATGATCATCCTGAACCTAAGAA...CCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp TTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCTTGAGCTGTAAGTCCTaGGACCTCCACACCATGGCT +
Preference number: 4 (lower is better)
Translates to: FFFVLRRTGLQFQCSLFPLSCKS*DLHTMA
Trigger: AGCCATGGTGTGGAGGTCTCAGGACTTACAGCTCAA...GGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp TTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCCAACCAGTGTGGTTGTaGTGCTTGTGGAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: FFFVLRRTGLQFQCSLFPQPVWL*CLWSKV
Trigger: CACCTTGCTCCACAAGCAGCACAACCACACTGGTTG...GGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp GGCCTTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTGGCCACACAAGTCTGTaGACCCTGAGTCTTATCTGT +
Preference number: 4 (lower is better)
Translates to: GLDPFFFVLRRTGLQFQCGHTSL*TLSLIC
Trigger: ACAGATAAGACTCAGGGTGCACAGACTTGTGTGGCC...ACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR GCA 90 bp TCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCATCCTTCATCTCATGGTaGTGGTCCAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SSLSCAELACSSSVLSFPSFISW*WSSCSS
Trigger: ACTGGAGCAGCTGGACCAGCACCATGAGATGAAGGA...TGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
CDS-3UTR GCA 90 bp GTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAAGTGGGTAGTTTCCCATTCTTaGATTCGTTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VWQVCAPWHFIHHIAQKWVVSHS*IRFSSS
Trigger: AGAGCTGGAGAAACGAATGCAAGAATGGGAAACTAC...CCACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp TTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCTGCGCAGAACTGGCCTaGAGTTCCAGTGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FFFVLRRTGLQFQCSLFPCAELA*SSSVLS
Trigger: AGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCA...GGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCTCTGCAGCAAAGCTGTaGACGGACTTAGACTGGGTC +
Preference number: 4 (lower is better)
Translates to: PTNHISTCSTMMPPSCQCSAAKL*TDLDWV
Trigger: GACCCAGTCTAAGTCCGTGCACAGCTTTGCTGCAGA...GCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCCAGTTCCTCACTGTCTaGAGCAAAGCTGTGCACGGA +
Preference number: 4 (lower is better)
Translates to: PTNHISTCSTMMPPSCQCQFLTV*SKAVHG
Trigger: TCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTG...GCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp CCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCTGTCTTGCGCAGAACTaGCCTGCAGTTCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: PTNHISTCSTMMPPSCQCCLAQN*PAVPVF
Trigger: GAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA...GCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTAGTGGAATGGTGGCCTaGGCTCTGACGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEISGMVA*ALTSWG
Trigger: CCCCCAGGACGTCAGAGCCCAGGCCACCATTCCACT...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp GCATCTCATACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGCAGGTCTGCGCTCCTTaGCATTTCATCCACCACATA +
Preference number: 4 (lower is better)
Translates to: ASHTGESAEQVLACDAAKQVCAP*HFIHHI
Trigger: TATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTG...CTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp GGCCTTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTATCATCCAAGGTGGCTaGATGCTCATTTGGACCACC +
Preference number: 4 (lower is better)
Translates to: GLDPFFFVLRRTGLQFQCIIQGG*MLIWTT
Trigger: GGTGGTCCAAATGAGCATCCAGCCACCTTGGATGAT...ACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACGAGAGGAGTTTTTGTTaGGGTGTGGTTGTCAATCCA +
Preference number: 4 (lower is better)
Translates to: GQFETVWQVCAPWHFIHHERSFC*GVVVNP
Trigger: TGGATTGACAACCACACCTCAACAAAAACTCCTCTC...GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493087.5
CDS-3UTR TCA 90 bp AACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAATCCGAGCAGCTAGTTTaGGGATCTGTCCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: NCVAGLRSLAFHPPHSPESEQLV*GSVLLL
Trigger: TAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGA...TTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TTCATCCACCACATAGCCCAGAAGTGGAATGGTGGCCTGGGCTCTGACGTCCTGTTTCTTGAAGGGCCTTaGTCCATTCTTCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: FIHHIAQKWNGGLGSDVLFLEGP*SILLCL
Trigger: AAGACAAAGAAGAATGGATCAAGGCCCTTCAAGAAA...CAGGACGTCAGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp ACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCGCATCGATGGTTTCTTaGAGGGCCTTGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: TGESAEQVLACDAAKLSSASMVS*RALIHS
Trigger: AGAATGGATCAAGGCCCTTCAAGAAACCATCGATGC...GGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp ACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGCCACATGCTCGACAATaGTGCCTCCTTCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TLVRTVNLEPTKLNLGTQPHARQ*CLLRVS
Trigger: ACTGACACGAAGGAGGCATCATTGTCGAGCATGTGG...CTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp AACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAAGACTTCTCCATATACTaGAGAAAGCTGCACACCACA +
Preference number: 4 (lower is better)
Translates to: NCVAGLRSLAFHPPHSPEDFSIY*RKLHTT
Trigger: TGTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTC...TTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTGTGGTTGTCAATCCATaGCTTCCTGGGGTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: QEGLAWGSHTKLSAKVLTVVVNP*LPGVLG
Trigger: TCCTAGAACCCCAGGAAGGCATGGATTGACAACCAC...AGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR GCA 90 bp CAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTTCCATCTGGTTTTGTaGTGCCATTACACCGTTGGC +
Preference number: 4 (lower is better)
Translates to: QHKRVLLGDHTPSFLPRFFHLVL*CHYTVG
Trigger: GCCAACGGTGTAATGGCAGCACAAAACCAGATGGAA...AAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR GCA 90 bp TTCATCCACCACATAGCCCAGAAGTGGAATGGTGGCCTGGGCTCTGACGTCCTGCATCTTAAGGAATGGTaGCAATTTCTGAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: FIHHIAQKWNGGLGSDVLHLKEW*QFLKDV
Trigger: GACATCCTTCAGAAATTGGCACCATTCCTTAAGATG...CAGGACGTCAGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp AGCAAAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCCATTCTTCTTTGTCTTaGGCAGAACTGGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SKAVHGLRLGQFETVWQVHSSLS*AELACS
Trigger: ACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATG...GACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp TGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAAGTGCCTCCTTCGTGTCAGTaGATTGAAAGGTTCTTTACA +
Preference number: 4 (lower is better)
Translates to: CVAGLRSLAFHPPHSPEVPPSCQ*IERFFT
Trigger: TGTAAAGAACCTTTCAATGCACTGACACGAAGGAGG...CACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp TCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCTTTACATTTCATCCACTCGCTTCCCCTTaGCCCCAAGGGCATCTGTCC +
Preference number: 4 (lower is better)
Translates to: STMMPPSCQCIERFFTFHPLASP*PQGHLS
Trigger: GGACAGATGCCCTTGGGGGCAAGGGGAAGCGAGTGG...ATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395740.5
CDS-3UTR GCA 90 bp AAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGTGCCTCTTCCCCTTCTaGCATGATTGTACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KLCTDLDWVSLKLCGRSACLFPF*HDCTFS
Trigger: AGAAAACGTACAATCATGGCAGAAGGGGAAGAGGCA...CGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR CCA 90 bp TGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTTTATGCCTGGGGGTTTaGTGTATATTGGACGAAGGT +
Preference number: 4 (lower is better)
Translates to: CLAQNWPAVPVFSLSQTPLCLGV*CILDEG
Trigger: ACCTTCGTCCAATATACACCAAACCCCCAGGCATAA...AGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp CTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTGGAGTTTTTGTTGAGGTGTaGTTGTCAATCCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: LAQNWPAVPVFSLSQTPGVFVEV*LSIHAF
Trigger: GAAGGCATGGATTGACAACCACACCTCAACAAAAAC...TCCAGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CCA 90 bp ATTCACCATCTCTGCTGGAAACGAGCCTCGGTTTGCTTCTTCCAACAGTTTGCATTCATCTCATGGTGCTaGTCCAGCTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: IHHLCWKRASVCFFQQFAFISWC*SSCSSS
Trigger: GGAACTGGAGCAGCTGGACCAGCACCATGAGATGAA...TGCAAACTGTTGGAAGAAGCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
CDS-3UTR CCA 90 bp CTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTGGAACCACTGATTTGAACTaGGGAATACGTTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: LAQNWPAVPVFSLSQTPGTTDLN*GIRSVM
Trigger: CATGACAGAACGTATTCCCCAGTTCAAATCAGTGGT...TCCAGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp AATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACATAGCCCAGAAGTaGAATGGTGGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: NANPGSNCEFRAYQAEFGHIAQK*NGGLGS
Trigger: AGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTG...CCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp TCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAACACATAGCCCAGAAGTaGAATGGTGGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SINANPGSNCEFRAYQAEHIAQK*NGGLGS
Trigger: AGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTG...TTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTCAGTTTGAAACTGTGTaGCAGGTCTGCGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPQFETV*QVCAPW
Trigger: CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTG...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp AACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAATGCACGGACTTAGACTaGGTCAGTTTGAAACTGTGT +
Preference number: 4 (lower is better)
Translates to: NCVAGLRSLAFHPPHSPECTDLD*VSLKLC
Trigger: ACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCA...TTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp TGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACCACATTGCTGTGGTCTaGAGACCAGCAGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CLGITHQAFCQGFDFSIYHIAVV*RPAVSP
Trigger: GGGAGAGACTGCTGGTCTCCAGACCACAGCAATGTG...GTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR CCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACGCAGGTAGGAGGGGTTaGACTTCCGCCGGATCGCCA +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDAGRRG*TSAGSP
Trigger: TGGCGATCCGGCGGAAGTCCAACCCCTCCTACCTGC...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAGGTACTGCTGCCTGTaGCTCCTGAGGGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVRYCCL*LLRAPG
Trigger: GCCAGGTGCCCTCAGGAGCCACAGGCAGCAGTACCT...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp ATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCTTTGGACTTGCAGCTaGGTGTTTTGCTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: IHVQHKRVLLGDHTPSFLLWTCS*VFCWPV
Trigger: AACAGGCCAGCAAAACACTCAGCTGCAAGTCCAAAG...CAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp GCATCTCATACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGGCGACTGATGAGATCTaGTACCTTACTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ASHTGESAEQVLACDAAKATDEI*YLTGFF
Trigger: GAAAAACCCAGTAAGGTATCAGATCTCATCAGTCGC...CTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp TCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACCTGTGACAGCTTTGAATAGAAGTATCTaGGCTAAGAGTGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SKVAGCSFGPPGVSPVTALNRSI*AKSGSF
Trigger: AAAGCTGCCACTCTTAGCTCAGATACTTCTATTCAA...AGCTGTCACAGGTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493087.5
CDS-3UTR TCA 90 bp GCATCTCATACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGACAGGTTCTAGCATGTaGTGCTGCAAAGTTAAGCTC +
Preference number: 4 (lower is better)
Translates to: ASHTGESAEQVLACDAAKTGSSM*CCKVKL
Trigger: GAGCTTAACTTTGCAGCATCACATGCTAGAACCTGT...CTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp AGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCACAGGTTCTAGCATGTaGTGCTGCAAAGTTAAGCTC +
Preference number: 4 (lower is better)
Translates to: RLGQFETVWQVCAPWHFITGSSM*CCKVKL
Trigger: GAGCTTAACTTTGCAGCATCACATGCTAGAACCTGT...GATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCGCATCGATGGTTTCTTaGAGGGCCTTGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: FFFVLRRTGLQFQCSLFPASMVS*RALIHS
Trigger: AGAATGGATCAAGGCCCTTCAAGAAACCATCGATGC...GGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp TGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAAGTGAGCAGTAGAAACCTCTaGGTGAATGTCATTATCCTT +
Preference number: 4 (lower is better)
Translates to: CVAGLRSLAFHPPHSPEVSSRNL*VNVIIL
Trigger: AAGGATAATGACATTCACTCAGAGGTTTCTACTGCT...CACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp CAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTGACTTCTCCATATACTaGAGAAAGCTGCACACCACA +
Preference number: 4 (lower is better)
Translates to: QHKRVLLGDHTPSFLPRFDFSIY*RKLHTT
Trigger: TGTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTC...AAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATGGATCGCCACCCGCCTaGAGTTGGAGCCGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYGSPPA*SWSRPR
Trigger: ACGAGGGCGGCTCCAACTTCAGGCGGGTGGCGATCC...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp GGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCGACGAAGGTGAATTCTaGAGGTGTAATGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GSCLGITHQAFCQGFDFSDEGEF*RCNGFG
Trigger: TCCAAAGCCATTACACCTGCAGAATTCACCTTCGTC...GGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp TCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCCACAGATTTTCCTTCATCTCATGGTaGTGGTCCAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SAEQVLACDAAKLSSHRFSFISW*WSSCSS
Trigger: ACTGGAGCAGCTGGACCAGCACCATGAGATGAAGGA...AAATCTGTGGGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
CDS-3UTR GCA 90 bp TCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATCCTTCATCTCATGGTaGTGGTCCAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SINANPGSNCEFRAYQAESFISW*WSSCSS
Trigger: ACTGGAGCAGCTGGACCAGCACCATGAGATGAAGGA...TTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
CDS-3UTR GCA 90 bp TGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTGTAGTTTCCCATTCTTaGATTCGTTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CLAQNWPAVPVFSLSQTPVVSHS*IRFSSS
Trigger: AGAGCTGGAGAAACGAATGCAAGAATGGGAAACTAC...AGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp AATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGTGCGCAGAACTGGCCTaGAGTTCCAGTGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NANPGSNCEFRAYQAEFGCAELA*SSSVLS
Trigger: AGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCA...CCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACCCTCCTTCGTGTCAGTaGATTGAAAGGTTCTTTACA +
Preference number: 4 (lower is better)
Translates to: GQFETVWQVCAPWHFIHHPPSCQ*IERFFT
Trigger: TGTAAAGAACCTTTCAATGCACTGACACGAAGGAGG...GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACTATACTGAAGAAAGCTaGACACCACACTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: GQFETVWQVCAPWHFIHHYTEES*TPHCFQ
Trigger: CTGGAAACAGTGTGGTGTGCAGCTTTCTTCAGTATA...GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CGGGTAAGGCTGTTTCACTGCTTCTCTTTGCGTTTAGCTGTGACAGCTAAAAGGAGCACAAGAGGGTCTTaGTTGGGGATCACACACCAA +
Preference number: 4 (lower is better)
Translates to: RVRLFHCFSLRLAVTAKRSTRGS*LGITHQ
Trigger: TTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCT...CCTTTTAGCTGTCACAGCTAAACGCAAAGAGAAGCAGTGAAACAGCCTTACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR GCA 90 bp AATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGTCTGCAGCAAAGCTGTaGACGGACTTAGACTGGGTC +
Preference number: 4 (lower is better)
Translates to: NANPGSNCEFRAYQAEFGSAAKL*TDLDWV
Trigger: GACCCAGTCTAAGTCCGTGCACAGCTTTGCTGCAGA...CCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp TGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTTATCTTAAAACACATTaGTGTGGTCTGGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: CLAQNWPAVPVFSLSQTPYLKTH*CGLETS
Trigger: GCTGGTCTCCAGACCACAGCAATGTGTTTTAAGATA...AGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR GCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAACGCGGCGAGTTTGGCTaGGGCGACTCCTGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKRGEFG*GDSCGS
Trigger: ACTGCCGCAGGAGTCGCCGCAGCCAAACTCGCCGCG...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATCCTACACGTCCCAGGTaGGACGCGGGCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYPTRPR*DAGLLQ
Trigger: CTGGAGCAGGCCCGCGTCGCACCTGGGACGTGTAGG...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATCACCCAGGCCGGAGTaGAGTGGTGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTSPRPE*SGAISA
Trigger: AGCCGAGATTGCACCACTGCACTCCGGCCTGGGTGA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp AGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCTCACCAACCAGTGTaGTTGTGCTGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SISNKPHIHMLDNDASFVSHQPV*LCCLWS
Trigger: GCTCCACAAGCAGCACAACCACACTGGTTGGTGAGA...CACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp TTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCAGTGATGCAGGAGCTGTaGCAGTTTCATCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LDWVSLKLCGRSALLGISVMQEL*QFHLFL
Trigger: GAGAAAGAGATGAAACTGCCACAGCTCCTGCATCAC...TGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493087.5
CDS-3UTR CCA 90 bp ACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGATTCACCATCTCTGCTaGAAACGAGCCTCGGTTTGC +
Preference number: 4 (lower is better)
Translates to: TLVRTVNLEPTKLNLGTQIHHLC*KRASVC
Trigger: GCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT...CTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp TTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCATTCACCATCTCTGCTaGAAACGAGCCTCGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LIHSSLSCAELACSSSVLIHHLC*KRASVC
Trigger: GCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT...GAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTATTCACCATCTCTGCTaGAAACGAGCCTCGGTTTGC +
Preference number: 4 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPIHHLC*KRASVC
Trigger: GCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTTGGGCTCTGACGTCCTaGGGGGCACCATACATGTAC +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEIWALTS*GAPYMY
Trigger: GTACATGTATGGTGCCCCCCAGGACGTCAGAGCCCA...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGTGGAATGGTGGCCTaGGCTCTGACGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCESGMVA*ALTSWG
Trigger: CCCCCAGGACGTCAGAGCCCAGGCCACCATTCCACT...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp AACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAACAGTTTGAAACTGTGTaGCAGGTCTGCGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NHISTCSTMMPPSCQCIEQFETV*QVCAPW
Trigger: CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTG...TTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp CCATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCGATGATCATCCAAGGTaGCTGGATGCTCATTTGGAC +
Preference number: 4 (lower is better)
Translates to: PYMYSTRGSCLGITHQAFDDHPR*LDAHLD
Trigger: GTCCAAATGAGCATCCAGCCACCTTGGATGATCATC...GAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGCCTCCACACCATGGCTaGTCCTGGAGGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEPPHHG*SWRSSA
Trigger: TGCTGAACTCCTCCAGGACCAGCCATGGTGTGGAGG...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTGAGACCTCCACACCATaGCTGGTCCTGGAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEIETSTP*LVLEEF
Trigger: GAACTCCTCCAGGACCAGCCATGGTGTGGAGGTCTC...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
3UTR CAA 72 bp AGCATGGCAAAACCTCGTCTCTTGATCCATTCTTCTTaGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SMAKPRLLIHSS*SCAELACSSSV
Trigger: AACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAAGAGACGAGGTTTTGCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR TCA 90 bp TTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCACTGGGTTTTTCTTTTaGGACACAAGAAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FFFVLRRTGLQFQCSLFPTGFFF*DTRSRG
Trigger: GCCTCTGCTTCTTGTGTCTCAAAAGAAAAACCCAGT...GGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp CAGGATGATCATCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACAAGGGTTCAGAAGCTTaGATAGAAGTATCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: QDDHPRWLDAHLDHLVSHKGSEA*IEVSEL
Trigger: TAGCTCAGATACTTCTATTCAAGCTTCTGAACCCTT...GTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGATGATCATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493087.5
CDS-3UTR TCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGCTGTCTGTTGTGGGTaGTGCAGGAGCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREAVCCG*CRSCGS
Trigger: ACTGCCACAGCTCCTGCATCACCCACAACAGACAGC...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGGCTGTCTGTTGTGGGTaGTGCAGGAGCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVAVCCG*CRSCGS
Trigger: ACTGCCACAGCTCCTGCATCACCCACAACAGACAGC...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp TTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCCTTCAACCACTGATTTaGACTGGGGAATACGTTCTG +
Preference number: 4 (lower is better)
Translates to: FFFVLRRTGLQFQCSLFPLQPLI*TGEYVL
Trigger: CAGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAG...GGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCGAGCAGCTAGTTTaGGGATCTGTCCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: LDWVSLKLCGRSALLGISSEQLV*GSVLLL
Trigger: TAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGA...TGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp CTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTGGAACAGCAACATGTTGTTaGATAAGAAAAGGTAGCGTT +
Preference number: 4 (lower is better)
Translates to: LAQNWPAVPVFSLSQTPGTATCC*IRKGSV
Trigger: AACGCTACCTTTTCTTATTCAACAACATGTTGCTGT...TCCAGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTGTAGAAACCTCTGAGTaGATGTCATTATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: CLAQNWPAVPVFSLSQTPVETSE*MSLSFA
Trigger: TGCAAAGGATAATGACATTCACTCAGAGGTTTCTAC...AGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp GTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGAGCAGTAGAAACCTCTaGGTGAATGTCATTATCCTT +
Preference number: 4 (lower is better)
Translates to: VQHKRVLLGDHTPSFLPRSSRNL*VNVIIL
Trigger: AAGGATAATGACATTCACTCAGAGGTTTCTACTGCT...CCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTAGCAGTAGAAACCTCTaGGTGAATGTCATTATCCTT +
Preference number: 4 (lower is better)
Translates to: CLAQNWPAVPVFSLSQTPSSRNL*VNVIIL
Trigger: AAGGATAATGACATTCACTCAGAGGTTTCTACTGCT...AGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACCTGTGACAGCTTTCGTGTCAGTGCATTaGAAGGTTCTTTACATTTCA +
Preference number: 4 (lower is better)
Translates to: SKVAGCSFGPPGVSPVTAFVSVH*KVLYIS
Trigger: TGAAATGTAAAGAACCTTTCAATGCACTGACACGAA...AGCTGTCACAGGTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp AAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGTTTCTGCCAAGGTTTTaGCTTCTCCATATACTGAAG +
Preference number: 4 (lower is better)
Translates to: KLCTDLDWVSLKLCGRSAFLPRF*LLHILK
Trigger: CTTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAA...CGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp GAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCGTTTAACTGCCGGTTTTCCCTGCTCATaGGCTAGTCTCATGCTCTAC +
Preference number: 4 (lower is better)
Translates to: EHRGNANQQPELENRLTAGFPCS*ASLMLY
Trigger: GTAGAGCATGAGACTAGCTCATGAGCAGGGAAAACC...GGCAGTTAAACGATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAAAGGGCACCTGGCCCTTaGAGGCAGCGGTCCCTACAC +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKRAPGP*RQRSLH
Trigger: GTGTAGGGACCGCTGCCTTCAAGGGCCAGGTGCCCT...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAAGCTGCCTGTGGCTCCTaGGGGCACCTGGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKAACGS*GHLALE
Trigger: TTCAAGGGCCAGGTGCCCTCAGGAGCCACAGGCAGC...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp CAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTCTAGGTAAAGCTTTATaGCTGGGGGTTTGGTGTATA +
Preference number: 4 (lower is better)
Translates to: QHKRVLLGDHTPSFLPRFLGKAL*LGVWCI
Trigger: TATACACCAAACCCCCAGGCATAAAGCTTTACCTAG...AAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp TGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACGTGGTTGTCAATCCATaGCTTCCTGGGGTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: CLGITHQAFCQGFDFSIYVVVNP*LPGVLG
Trigger: TCCTAGAACCCCAGGAAGGCATGGATTGACAACCAC...GTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR GCA 90 bp AATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGGGCCACACAAGTCTGTaGACCCTGAGTCTTATCTGT +
Preference number: 4 (lower is better)
Translates to: NANPGSNCEFRAYQAEFGGHTSL*TLSLIC
Trigger: ACAGATAAGACTCAGGGTGCACAGACTTGTGTGGCC...CCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR GCA 90 bp GGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCTCTCCATTCACTATGTaGGTATCAAGCAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GSCLGITHQAFCQGFDFSSPFTM*VSSKGS
Trigger: TGAACCCTTGCTTGATACGCACATAGTGAATGGAGA...GGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR GCA 90 bp AATATCTGCTTAGAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATTGGTGCTGGTCCAGCTaGTCCAGTTCCAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: NICLEHRGNANQQPELENWCWSS*SSSRGL
Trigger: AAGCCCTCTGGAACTGGAGCAGCTGGACCAGCACCA...ATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTCTAAGCAGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAATGGTGCTGGTCCAGCTaGTCCAGTTCCAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREWCWSS*SSSRGL
Trigger: AAGCCCTCTGGAACTGGAGCAGCTGGACCAGCACCA...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp ACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCGTAGTTTCCCATTCTTaGATTCGTTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TGESAEQVLACDAAKLSSVVSHS*IRFSSS
Trigger: AGAGCTGGAGAAACGAATGCAAGAATGGGAAACTAC...GGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp ACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCTTTTCATTCCATCAATaGCAACCCTGGTTCGAACTG +
Preference number: 4 (lower is better)
Translates to: TGESAEQVLACDAAKLSSFSFHQ*QPWFEL
Trigger: CAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAA...GGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTCATTCTTCTTTGTCTTaGGCAGAACTGGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPHSSLS*AELACS
Trigger: ACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATG...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp ATTCACCATCTCTGCTGGAAACGAGCCTCGGTTTGCTTCTTCCAACAGTTTGCACATTCTTCTTTGTCTTaGGCAGAACTGGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: IHHLCWKRASVCFFQQFAHSSLS*AELACS
Trigger: ACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATG...TGCAAACTGTTGGAAGAAGCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp ACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCTATACTGAAGAAAGCTaGACACCACACTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TGESAEQVLACDAAKLSSYTEES*TPHCFQ
Trigger: CTGGAAACAGTGTGGTGTGCAGCTTTCTTCAGTATA...GGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp TGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACAGCACAAGAGGGTCTTaGTTGGGGATCACACACCAA +
Preference number: 4 (lower is better)
Translates to: CLGITHQAFCQGFDFSIYSTRGS*LGITHQ
Trigger: TTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCT...GTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGTTGGACAGGTACTGCTaGCTGTGGCTCCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVLDRYC*LWLLRA
Trigger: TGCCCTCAGGAGCCACAGGCAGCAGTACCTGTCCAA...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp ATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGTGGTTGTGCTGCTTGTaGAGCAAGGTGGAACTAAAG +
Preference number: 4 (lower is better)
Translates to: IHVQHKRVLLGDHTPSFLWLCCL*SKVELK
Trigger: CTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCA...CAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp CCATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTTATGCCTGGGGGTTTaGTGTATATTGGACGAAGGT +
Preference number: 4 (lower is better)
Translates to: PYMYSTRGSCLGITHQAFLCLGV*CILDEG
Trigger: ACCTTCGTCCAATATACACCAAACCCCCAGGCATAA...GAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp ACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCGTAAAGCTTTATGCCTaGGGGTTTGGTGTATATTGG +
Preference number: 4 (lower is better)
Translates to: TGESAEQVLACDAAKLSSVKLYA*GFGVYW
Trigger: CCAATATACACCAAACCCCCAGGCATAAAGCTTTAC...GGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp AGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCACCACTGATTTGAACTaGGGAATACGTTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: RLGQFETVWQVCAPWHFITTDLN*GIRSVM
Trigger: CATGACAGAACGTATTCCCCAGTTCAAATCAGTGGT...GATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp TTCATCCACCACATAGCCCAGAAGTGGAATGGTGGCCTGGGCTCTGACGTCCTGATTGCACTATTAGAATaGCTTGCTGCTGTAGATATA +
Preference number: 4 (lower is better)
Translates to: FIHHIAQKWNGGLGSDVLIALLE*LAAVDI
Trigger: TATATCTACAGCAGCAAGCCATTCTAATAGTGCAAT...CAGGACGTCAGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACCAAGAGGGTCTTGCTTaGGGATCACACACCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYQEGLA*GSHTKL
Trigger: AAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp TCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAACAAGAGGGTCTTGCTTaGGGATCACACACCAAGCTT +
Preference number: 4 (lower is better)
Translates to: SINANPGSNCEFRAYQAEQEGLA*GSHTKL
Trigger: AAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG...TTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGCACATAGCCCAGAAGTaGAATGGTGGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEHIAQK*NGGLGS
Trigger: AGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTG...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp AGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGCAGGTCTGCGCTCCTTaGCATTTCATCCACCACATA +
Preference number: 4 (lower is better)
Translates to: SISNKPHIHMLDNDASFVQVCAP*HFIHHI
Trigger: TATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTG...CACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGGGCTGGATGCTCATTTaGACCACCTGGTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEGWMLI*TTWCLT
Trigger: GGTGAGACACCAGGTGGTCCAAATGAGCATCCAGCC...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCCACAGATTTATCATCCAAGGTGGCTaGATGCTCATTTGGACCACC +
Preference number: 4 (lower is better)
Translates to: SAEQVLACDAAKLSSHRFIIQGG*MLIWTT
Trigger: GGTGGTCCAAATGAGCATCCAGCCACCTTGGATGAT...AAATCTGTGGGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACGAGACCTCCACACCATaGCTGGTCCTGGAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDETSTP*LVLEEF
Trigger: GAACTCCTCCAGGACCAGCCATGGTGTGGAGGTCTC...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCTTTACATTTCATGAGACCTCCACACCATaGCTGGTCCTGGAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: STMMPPSCQCIERFFTFHETSTP*LVLEEF
Trigger: GAACTCCTCCAGGACCAGCCATGGTGTGGAGGTCTC...ATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp TGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTGAAGTCACAAATGGTTaGAGTAAAACTCCCTTCATT +
Preference number: 4 (lower is better)
Translates to: CLAQNWPAVPVFSLSQTPEVTNG*SKTPFI
Trigger: AATGAAGGGAGTTTTACTTCAACCATTTGTGACTTC...AGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp ATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGACTGGGTTTTTCTTTTaGGACACAAGAAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: IHVQHKRVLLGDHTPSFLTGFFF*DTRSRG
Trigger: GCCTCTGCTTCTTGTGTCTCAAAAGAAAAACCCAGT...CAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp GGCCTTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTAAGGGTTCAGAAGCTTaGATAGAAGTATCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: GLDPFFFVLRRTGLQFQCKGSEA*IEVSEL
Trigger: TAGCTCAGATACTTCTATTCAAGCTTCTGAACCCTT...ACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR TCA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTACAGGTTCTAGCATGTaGTGCTGCAAAGTTAAGCTC +
Preference number: 4 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPTGSSM*CCKVKL
Trigger: GAGCTTAACTTTGCAGCATCACATGCTAGAACCTGT...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCACAGGTTCTAGCATGTaGTGCTGCAAAGTTAAGCTC +
Preference number: 4 (lower is better)
Translates to: LIHSSLSCAELACSSSVLTGSSM*CCKVKL
Trigger: GAGCTTAACTTTGCAGCATCACATGCTAGAACCTGT...GAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACACTTTATCGGTAGAATaGCTCTGCACACTAATTTCA +
Preference number: 4 (lower is better)
Translates to: GQFETVWQVCAPWHFIHHTLSVE*LCTLIS
Trigger: TGAAATTAGTGTGCAGAGTCATTCTACCGATAAAGT...GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551984.5
CDS-3UTR TCA 90 bp AGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCGGTTTTGTAAGTGTCTaGCAGTTCTTCCTTCATACA +
Preference number: 4 (lower is better)
Translates to: RLGQFETVWQVCAPWHFIGFVSV*QFFLHT
Trigger: TGTATGAAGGAAGAACTGTCAGACACTTACAAAACC...GATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR GCA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGCAACCAGTGTGGTTGTaGTGCTTGTGGAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LENRLTASVGDLIHTFQGQPVWL*CLWSKV
Trigger: CACCTTGCTCCACAAGCAGCACAACCACACTGGTTG...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTACAACCAGTGTGGTTGTaGTGCTTGTGGAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLQPVWL*CLWSKV
Trigger: CACCTTGCTCCACAAGCAGCACAACCACACTGGTTG...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTATGCGCAGAACTGGCCTaGAGTTCCAGTGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLCAELA*SSSVLS
Trigger: AGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCA...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTAACCACATATCCACATaGTCGACAATGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPNHIST*STMMPP
Trigger: AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTTCTGCAGCAAAGCTGTaGACGGACTTAGACTGGGTC +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEISAAKL*TDLDWV
Trigger: GACCCAGTCTAAGTCCGTGCACAGCTTTGCTGCAGA...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp TTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAACAGTTCCTCACTGTCTaGAGCAAAGCTGTGCACGGA +
Preference number: 4 (lower is better)
Translates to: FHSINANPGSNCEFRAYQQFLTV*SKAVHG
Trigger: TCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTG...TTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp TTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAATCCAAGGTGGCTGGATaGTCATTTGGACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: FHSINANPGSNCEFRAYQSKVAG*SFGPPG
Trigger: ACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGA...TTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTCCAAGGTGGCTGGATaGTCATTTGGACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKESKVAG*SFGPPG
Trigger: ACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp AATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGTGCAATACCTTCATCTCATGGTaGTGGTCCAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: NRLTASVGDLIHTFQGCNTFISW*WSSCSS
Trigger: ACTGGAGCAGCTGGACCAGCACCATGAGATGAAGGT...ATTGCACCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATCTTTGGACAGGTACTaGTGCCTGTGGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTSLDRY*CLWLLR
Trigger: CCTCAGGAGCCACAGGCAGCAGTACCTGTCCAAAGA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp AATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGTGCAATTCTCACCAACCAGTGTaGTTGTGCTGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: NRLTASVGDLIHTFQGCNSHQPV*LCCLWS
Trigger: GCTCCACAAGCAGCACAACCACACTGGTTGGTGAGA...ATTGCACCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTCTCACCAACCAGTGTaGTTGTGCTGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKESHQPV*LCCLWS
Trigger: GCTCCACAAGCAGCACAACCACACTGGTTGGTGAGA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCAGGGTTTGGTGTATATTaGACGAAGGTGAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: LDWVSLKLCGRSALLGISGFGVY*TKVNSA
Trigger: TGCAGAATTCACCTTCGTCCAATATACACCAAACCC...TGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp TTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAACTGCCATTACACCGTTaGCCACACAAGTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: FHSINANPGSNCEFRAYQLPLHR*PHKSVH
Trigger: GTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAG...TTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CCA 90 bp TTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCTCACATTCCATCTaGTTTTGTGCTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: LDWVSLKLCGRSALLGISSSHSI*FCAAIT
Trigger: TGTAATGGCAGCACAAAACCAGATGGAATGTGAGGA...TGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493087.5
CDS-3UTR CCA 90 bp TCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCCACAGATTTGTGATGCAGGAGCTGTaGCAGTTTCATCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SAEQVLACDAAKLSSHRFVMQEL*QFHLFL
Trigger: GAGAAAGAGATGAAACTGCCACAGCTCCTGCATCAC...AAATCTGTGGGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CCA 90 bp AATATCTGCTTAGAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCACTGGGCCTATGCCTaGAGTCCTGTAGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: NICLEHRGNANQQPELENHWAYA*SPVATV
Trigger: GACAGTAGCTACAGGACTCCAGGCATAGGCCCAGTG...ATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTCTAAGCAGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACCACTGGGCCTATGCCTaGAGTCCTGTAGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDHWAYA*SPVATV
Trigger: GACAGTAGCTACAGGACTCCAGGCATAGGCCCAGTG...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGTTCATCTCATGGTGCTaGTCCAGCTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LENRLTASVGDLIHTFQGFISWC*SSCSSS
Trigger: GGAACTGGAGCAGCTGGACCAGCACCATGAGATGAA...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp TTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAATTCATCTCATGGTGCTaGTCCAGCTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: FHSINANPGSNCEFRAYQFISWC*SSCSSS
Trigger: GGAACTGGAGCAGCTGGACCAGCACCATGAGATGAA...TTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
CDS-3UTR CCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGGTCTCCTTCATCTCATaGTGCTGGTCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVVSFIS*CWSSCS
Trigger: GGAGCAGCTGGACCAGCACCATGAGATGAAGGAGAC...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACGTCTCCTTCATCTCATaGTGCTGGTCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDVSFIS*CWSSCS
Trigger: GGAGCAGCTGGACCAGCACCATGAGATGAAGGAGAC...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTGTCTTGCGCAGAACTaGCCTGCAGTTCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKECLAQN*PAVPVF
Trigger: GAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACTGTGGTTTAGATACCTaGGGGGCACCATACATGTAC +
Preference number: 4 (lower is better)
Translates to: CLGITHQAFCQGFDFSIYCGLDT*GAPYMY
Trigger: GTACATGTATGGTGCCCCCCAGGTATCTAAACCACA...GTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395740.5
CDS-3UTR CCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAATGGGCTCTGACGTCCTaGGGGGCACCATACATGTAC +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEWALTS*GAPYMY
Trigger: GTACATGTATGGTGCCCCCCAGGACGTCAGAGCCCA...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TTTCATGCCTTTGATGAAAAGCATCGATGGTTTCTTGAAGGGCCTGTAATCCCACAGTTTGAAACTGTGTaGCAGGTCTGCGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FHAFDEKHRWFLEGPVIPQFETV*QVCAPW
Trigger: CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTG...TGGGATTACAGGCCCTTCAAGAAACCATCGATGCTTTTCATCAAAGGCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR CCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTCTCATTTGGACCACCTaGTGTCTCACCTGTGACAGC +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEILIWTT*CLTCDS
Trigger: GCTGTCACAGGTGAGACACCAGGTGGTCCAAATGAG...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp TCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCTTTACATTTCATGGCTGGATGCTCATTTaGACCACCTGGTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: STMMPPSCQCIERFFTFHGWMLI*TTWCLT
Trigger: GGTGAGACACCAGGTGGTCCAAATGAGCATCCAGCC...ATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACGGCTGGATGCTCATTTaGACCACCTGGTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDGWMLI*TTWCLT
Trigger: GGTGAGACACCAGGTGGTCCAAATGAGCATCCAGCC...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TTCTTTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCCCTCCACACCATGGCTaGTCCTGGAGGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FFTFHTHCHFIISDPSWGPPHHG*SWRSSA
Trigger: TGCTGAACTCCTCCAGGACCAGCCATGGTGTGGAGG...GCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACCACATTGCTGTGGTCTaGAGACCAGCAGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDHIAVV*RPAVSP
Trigger: GGGAGAGACTGCTGGTCTCCAGACCACAGCAATGTG...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp TTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCGATGAAAAGCATCGATaGTTTCTTGAAGGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: FFFVLRRTGLQFQCSLFPDEKHR*FLEGPV
Trigger: TACAGGCCCTTCAAGAAACCATCGATGCTTTTCATC...GGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
3UTR CAA 72 bp GCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTaGACTTCTCCATATACTGAAGAAAGCTGCACACCA +
Preference number: 4 (lower is better)
Translates to: AWGSHTKLSAKV*TSPYTEESCTP
Trigger: TGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
3UTR CAA 72 bp CAAGACGCTTGTTCCCTAGAAGTTTACTTGCTCCGGTaGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: QDACSLEVYLLR*VLATQVVSSPE
Trigger: TTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCGGAGCAAGTAAACTTCTAGGGAACAAGCGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
CDS-3UTR TCA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTACTTTGGACTTGCAGCTaGGTGTTTTGCTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLLWTCS*VFCWPV
Trigger: AACAGGCCAGCAAAACACTCAGCTGCAAGTCCAAAG...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp TCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAAGCGACTGATGAGATCTaGTACCTTACTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SINANPGSNCEFRAYQAEATDEI*YLTGFF
Trigger: GAAAAACCCAGTAAGGTATCAGATCTCATCAGTCGC...TTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp ATTAGGGATACAGCACCAACATCTAGAGCAACAAGGAACATTTTCTTTCTATGTGCTGTCTGTTGTGGGTaGTGCAGGAGCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: IRDTAPTSRATRNIFFLCAVCCG*CRSCGS
Trigger: ACTGCCACAGCTCCTGCATCACCCACAACAGACAGC...ACATAGAAAGAAAATGTTCCTTGTTGCTCTAGATGTTGGTGCTGTATCCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACCTTCAACCACTGATTTaGACTGGGGAATACGTTCTG +
Preference number: 4 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYLQPLI*TGEYVL
Trigger: CAGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAG...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp CCATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCAATTTCTTCAACCACTaGTTTGAACTGGGGAATACG +
Preference number: 4 (lower is better)
Translates to: PYMYSTRGSCLGITHQAFNFFNH*FELGNT
Trigger: CGTATTCCCCAGTTCAAATCAGTGGTTGAAGAAATT...GAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp CAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTAATTTCTTCAACCACTaGTTTGAACTGGGGAATACG +
Preference number: 4 (lower is better)
Translates to: QEGLAWGSHTKLSAKVLTNFFNH*FELGNT
Trigger: CGTATTCCCCAGTTCAAATCAGTGGTTGAAGAAATT...AGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACTCCGAGCAGCTAGTTTaGGGATCTGTCCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: CLGITHQAFCQGFDFSIYSEQLV*GSVLLL
Trigger: TAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGA...GTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp CAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTTGCAATTGCATTTCTaGAGGTTTCATGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: QHKRVLLGDHTPSFLPRFLQLHF*RFHAFD
Trigger: ATCAAAGGCATGAAACCTTCAGAAATGCAATTGCAA...AAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp ACCGGGGAATCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCTTGCAATTGCATTTCTaGAGGTTTCATGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: TGESAEQVLACDAAKLSSLQLHF*RFHAFD
Trigger: ATCAAAGGCATGAAACCTTCAGAAATGCAATTGCAA...GGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAACCACATGCTCGACAATaGTGCCTCCTTCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREPHARQ*CLLRVS
Trigger: ACTGACACGAAGGAGGCATCATTGTCGAGCATGTGG...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACGACTTCTCCATATACTaGAGAAAGCTGCACACCACA +
Preference number: 4 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYDFSIY*RKLHTT
Trigger: TGTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTC...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp AGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGGACTTCTCCATATACTaGAGAAAGCTGCACACCACA +
Preference number: 4 (lower is better)
Translates to: SISNKPHIHMLDNDASFVDFSIY*RKLHTT
Trigger: TGTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTC...CACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCTTTCTGCCAAGGTTTTaGCTTCTCCATATACTGAAG +
Preference number: 4 (lower is better)
Translates to: FFFVLRRTGLQFQCSLFPFLPRF*LLHILK
Trigger: CTTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAA...GGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp CAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTAACAGTGAAACTGCCTaGACTCTTGTTCTACAGATT +
Preference number: 4 (lower is better)
Translates to: QEGLAWGSHTKLSAKVLTNSETA*TLVLQI
Trigger: AATCTGTAGAACAAGAGTTCAGGCAGTTTCACTGTT...AGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395740.5
CDS-3UTR TCA 90 bp TTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCCAGATACTTCTGCTaGTTCAATCTGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LIHSSLSCAELACSSSVLSRYFC*FNLIGG
Trigger: ACCTCCTATCAGATTGAATCAGCAGAAGTATCTGGA...GAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR TCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAAACTCCTGACCTGAAGTaGTCTGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKTPDLK*SAHLGL
Trigger: GAGGCCGAGGTGGGCAGATCACTTCAGGTCAGGAGT...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTGGCCACACAAGTCTGTaGACCCTGAGTCTTATCTGT +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEIGHTSL*TLSLIC
Trigger: ACAGATAAGACTCAGGGTGCACAGACTTGTGTGGCC...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACTCCTTCATCTCATGGTaGTGGTCCAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDSFISW*WSSCSS
Trigger: ACTGGAGCAGCTGGACCAGCACCATGAGATGAAGGA...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp TTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCCATCTTAAGGAATGGTaGCAATTTCTGAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: FFFVLRRTGLQFQCSLFPHLKEW*QFLKDV
Trigger: GACATCCTTCAGAAATTGGCACCATTCCTTAAGATG...GGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp ACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTTTTCATTCCATCAATaGCAACCCTGGTTCGAACTG +
Preference number: 4 (lower is better)
Translates to: TLVRTVNLEPTKLNLGTQFSFHQ*QPWFEL
Trigger: CAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAA...CTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGTGCGCAGAACTGGCCTaGAGTTCCAGTGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVCAELA*SSSVLS
Trigger: AGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCA...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp AACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAAACCACATATCCACATaGTCGACAATGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NHISTCSTMMPPSCQCIENHIST*STMMPP
Trigger: AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT...TTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACACTGTGTGGCAGGTCTaGGCTCCTTGGCATTTCATC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDTVWQV*APWHFI
Trigger: GATGAAATGCCAAGGAGCGCAGACCTGCCACACAGT...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATCTGCAGCAAAGCTGTaGACGGACTTAGACTGGGTC +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTSAAKL*TDLDWV
Trigger: GACCCAGTCTAAGTCCGTGCACAGCTTTGCTGCAGA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACCAGTTCCTCACTGTCTaGAGCAAAGCTGTGCACGGA +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDQFLTV*SKAVHG
Trigger: TCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTG...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAATCCAAGGTGGCTGGATaGTCATTTGGACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCERESKVAG*SFGPPG
Trigger: ACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGA...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCGTTTAACTGCCCATGAGCTAGTCTCATaGTCTACCTTCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: EHRGNANQQPELENRLTAHELVS*STFISW
Trigger: CCATGAGATGAAGGTAGAGCATGAGACTAGCTCATG...GGCAGTTAAACGATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTGGGTTTGGTGTATATTaGACGAAGGTGAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPGFGVY*TKVNSA
Trigger: TGCAGAATTCACCTTCGTCCAATATACACCAAACCC...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp AATATCTGCTTAGAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCTGCCATTACACCGTTaGCCACACAAGTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: NICLEHRGNANQQPELENLPLHR*PHKSVH
Trigger: GTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAG...ATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTCTAAGCAGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGCTGCCATTACACCGTTaGCCACACAAGTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVLPLHR*PHKSVH
Trigger: GTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAG...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGCCCTCTCTTGTACCTTaGTTTCTGTTTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LENRLTASVGDLIHTFQGPSLVP*FLFLPL
Trigger: GAGGGGCAGAAACAGAAACCAAGGTACAAGAGAGGG...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGCCCTCTCTTGTACCTTaGTTTCTGTTTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEPSLVP*FLFLPL
Trigger: GAGGGGCAGAAACAGAAACCAAGGTACAAGAGAGGG...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATTCATCTCATGGTGCTaGTCCAGCTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTFISWC*SSCSSS
Trigger: GGAACTGGAGCAGCTGGACCAGCACCATGAGATGAA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGTTCATCTCATGGTGCTaGTCCAGCTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVFISWC*SSCSSS
Trigger: GGAACTGGAGCAGCTGGACCAGCACCATGAGATGAA...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAATTCACCATCTCTGCTaGAAACGAGCCTCGGTTTGC +
Preference number: 4 (lower is better)
Translates to: FHSINANPGSNCEFRAYQIHHLC*KRASVC
Trigger: GCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT...TTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTACCACTGATTTGAACTaGGGAATACGTTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPTTDLN*GIRSVM
Trigger: CATGACAGAACGTATTCCCCAGTTCAAATCAGTGGT...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAATGTCTTGCGCAGAACTaGCCTGCAGTTCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCERECLAQN*PAVPVF
Trigger: GAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp ACTGATTTGAACTGGGGAATACGTTCTGTCATGTTTTTAACCAATTCCATTGCATGGGCTCTGACGTCCTaGGGGGCACCATACATGTAC +
Preference number: 4 (lower is better)
Translates to: TDLNWGIRSVMFLTNSIAWALTS*GAPYMY
Trigger: GTACATGTATGGTGCCCCCCAGGACGTCAGAGCCCA...TGCAATGGAATTGGTTAAAAACATGACAGAACGTATTCCCCAGTTCAAATCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAACACATAGCCCAGAAGTaGAATGGTGGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEHIAQK*NGGLGS
Trigger: AGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTG...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACCAGTTTGAAACTGTGTaGCAGGTCTGCGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDQFETV*QVCAPW
Trigger: CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTG...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCCACAGATTTTGCACGGACTTAGACTaGGTCAGTTTGAAACTGTGT +
Preference number: 4 (lower is better)
Translates to: SAEQVLACDAAKLSSHRFCTDLD*VSLKLC
Trigger: ACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCA...AAATCTGTGGGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp ACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGCTGCCTTATAAAAGCTaGATTTATTCCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TLVRTVNLEPTKLNLGTQLPYKS*IYSSWP
Trigger: TGGCCAAGAGGAATAAATTCAGCTTTTATAAGGCAG...CTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACACTTTGGACTTGCAGCTaGGTGTTTTGCTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTLWTCS*VFCWPV
Trigger: AACAGGCCAGCAAAACACTCAGCTGCAAGTCCAAAG...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp ATTCACCATCTCTGCTGGAAACGAGCCTCGGTTTGCTTCTTCCAACAGTTTGCAAATTTCTTCAACCACTaGTTTGAACTGGGGAATACG +
Preference number: 4 (lower is better)
Translates to: IHHLCWKRASVCFFQQFANFFNH*FELGNT
Trigger: CGTATTCCCCAGTTCAAATCAGTGGTTGAAGAAATT...TGCAAACTGTTGGAAGAAGCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTAATTTCTTCAACCACTaGTTTGAACTGGGGAATACG +
Preference number: 4 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPNFFNH*FELGNT
Trigger: CGTATTCCCCAGTTCAAATCAGTGGTTGAAGAAATT...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTTTCTTGAAGGGCCTTaGTCCATTCTTCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LIHSSLSCAELACSSSVLFLEGP*SILLCL
Trigger: AAGACAAAGAAGAATGGATCAAGGCCCTTCAAGAAA...GAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTCCACATGCTCGACAATaGTGCCTCCTTCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIPHARQ*CLLRVS
Trigger: ACTGACACGAAGGAGGCATCATTGTCGAGCATGTGG...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp ACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTTTCTGCCAAGGTTTTaGCTTCTCCATATACTGAAG +
Preference number: 4 (lower is better)
Translates to: TLVRTVNLEPTKLNLGTQFLPRF*LLHILK
Trigger: CTTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAA...CTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTATTCTTAGGTTCAGGATaGTCATCCAAGGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLFLGSG*SSKVAG
Trigger: TCCAGCCACCTTGGATGATCATCCTGAACCTAAGAA...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAACAACCAGTGTGGTTGTaGTGCTTGTGGAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEQPVWL*CLWSKV
Trigger: CACCTTGCTCCACAAGCAGCACAACCACACTGGTTG...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACCTAGGTAAAGCTTTATaGCTGGGGGTTTGGTGTATA +
Preference number: 4 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYLGKAL*LGVWCI
Trigger: TATACACCAAACCCCCAGGCATAAAGCTTTACCTAG...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp AATATCTGCTTAGAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATGTGGTTGTCAATCCATaGCTTCCTGGGGTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: NICLEHRGNANQQPELENVVVNP*LPGVLG
Trigger: TCCTAGAACCCCAGGAAGGCATGGATTGACAACCAC...ATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTCTAAGCAGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGGTGGTTGTCAATCCATaGCTTCCTGGGGTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVVVVNP*LPGVLG
Trigger: TCCTAGAACCCCAGGAAGGCATGGATTGACAACCAC...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGTGGTTGTCAATCCATaGCTTCCTGGGGTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREVVVNP*LPGVLG
Trigger: TCCTAGAACCCCAGGAAGGCATGGATTGACAACCAC...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGGCCACACAAGTCTGTaGACCCTGAGTCTTATCTGT +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREGHTSL*TLSLIC
Trigger: ACAGATAAGACTCAGGGTGCACAGACTTGTGTGGCC...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACACATCTGGTTTTGTGCTaGCATTACACCGTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTHLVLC*HYTVGH
Trigger: GTGGCCAACGGTGTAATGGCAGCACAAAACCAGATG...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACTCTCCATTCACTATGTaGGTATCAAGCAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYSPFTM*VSSKGS
Trigger: TGAACCCTTGCTTGATACGCACATAGTGAATGGAGA...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR GCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAATCCTTCATCTCATGGTaGTGGTCCAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCESFISW*WSSCSS
Trigger: ACTGGAGCAGCTGGACCAGCACCATGAGATGAAGGA...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp AACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAATTTTCATTCCATCAATaGCAACCCTGGTTCGAACTG +
Preference number: 4 (lower is better)
Translates to: NHISTCSTMMPPSCQCIEFSFHQ*QPWFEL
Trigger: CAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAA...TTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp TCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCCACAGATTTTATACTGAAGAAAGCTaGACACCACACTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SAEQVLACDAAKLSSHRFYTEES*TPHCFQ
Trigger: CTGGAAACAGTGTGGTGTGCAGCTTTCTTCAGTATA...AAATCTGTGGGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp TCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCTTTACATTTCATAGCACAAGAGGGTCTTaGTTGGGGATCACACACCAA +
Preference number: 4 (lower is better)
Translates to: STMMPPSCQCIERFFTFHSTRGS*LGITHQ
Trigger: TTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCT...ATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAGCACAAGAGGGTCTTaGTTGGGGATCACACACCAA +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVSTRGS*LGITHQ
Trigger: TTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCT...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTACTGTGTGGCAGGTCTaGGCTCCTTGGCATTTCATC +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDITVWQV*APWHFI
Trigger: GATGAAATGCCAAGGAGCGCAGACCTGCCACACAGT...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGTGGTTGTGCTGCTTGTaGAGCAAGGTGGAACTAAAG +
Preference number: 4 (lower is better)
Translates to: LENRLTASVGDLIHTFQGWLCCL*SKVELK
Trigger: CTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCA...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp GAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCGTTTAACTGCCGGGTTTGGTGTATATTaGACGAAGGTGAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: EHRGNANQQPELENRLTAGFGVY*TKVNSA
Trigger: TGCAGAATTCACCTTCGTCCAATATACACCAAACCC...GGCAGTTAAACGATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACGGGTTTGGTGTATATTaGACGAAGGTGAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYGFGVY*TKVNSA
Trigger: TGCAGAATTCACCTTCGTCCAATATACACCAAACCC...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp GAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCGTTTAACTGCCGTTTTTGTTGAGGTGTaGTTGTCAATCCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: EHRGNANQQPELENRLTAVFVEV*LSIHAF
Trigger: GAAGGCATGGATTGACAACCACACCTCAACAAAAAC...GGCAGTTAAACGATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp AATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGGTTTTTGTTGAGGTGTaGTTGTCAATCCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: NANPGSNCEFRAYQAEFGVFVEV*LSIHAF
Trigger: GAAGGCATGGATTGACAACCACACCTCAACAAAAAC...CCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAACTGCCATTACACCGTTaGCCACACAAGTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCELPLHR*PHKSVH
Trigger: GTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAG...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACATTCACCATCTCTGCTaGAAACGAGCCTCGGTTTGC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDIHHLC*KRASVC
Trigger: GCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TTCTTTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTGTCTTGCGCAGAACTaGCCTGCAGTTCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: FFTFHTHCHFIISDPSWGCLAQN*PAVPVF
Trigger: GAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA...GCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAACAAGAGGGTCTTGCTTaGGGATCACACACCAAGCTT +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREQEGLA*GSHTKL
Trigger: AAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAACAGGTCTGCGCTCCTTaGCATTTCATCCACCACATA +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREQVCAP*HFIHHI
Trigger: TATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTG...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACCAGGTCTGCGCTCCTTaGCATTTCATCCACCACATA +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDQVCAP*HFIHHI
Trigger: TATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTG...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAACTCATTTGGACCACCTaGTGTCTCACCTGTGACAGC +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCELIWTT*CLTCDS
Trigger: GCTGTCACAGGTGAGACACCAGGTGGTCCAAATGAG...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TTCTTTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCCTCATTTGGACCACCTaGTGTCTCACCTGTGACAGC +
Preference number: 4 (lower is better)
Translates to: FFTFHTHCHFIISDPSWGLIWTT*CLTCDS
Trigger: GCTGTCACAGGTGAGACACCAGGTGGTCCAAATGAG...GCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACAATCATCCAAGGTGGCTaGATGCTCATTTGGACCACC +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTIIQGG*MLIWTT
Trigger: GGTGGTCCAAATGAGCATCCAGCCACCTTGGATGAT...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAACCTCCACACCATGGCTaGTCCTGGAGGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKPPHHG*SWRSSA
Trigger: TGCTGAACTCCTCCAGGACCAGCCATGGTGTGGAGG...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
3UTR CAA 72 bp TATAAAACCCAAGACGCTTGTTCCCTAGAAGTTTACTaGCTCCGGTTGGTGCTTGCTACTCAGGTTGTATCT +
Preference number: 4 (lower is better)
Translates to: YKTQDACSLEVY*LRLVLATQVVS
Trigger: AGATACAACCTGAGTAGCAAGCACCAACCGGAGCAAGTAAACTTCTAGGGAACAAGCGTCTTGGGTTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
CDS-3UTR TCA 90 bp AACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAACTGCCTTATAAAAGCTaGATTTATTCCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: NHISTCSTMMPPSCQCIELPYKS*IYSSWP
Trigger: TGGCCAAGAGGAATAAATTCAGCTTTTATAAGGCAG...TTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTCTTTGGACTTGCAGCTaGGTGTTTTGCTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDILWTCS*VFCWPV
Trigger: AACAGGCCAGCAAAACACTCAGCTGCAAGTCCAAAG...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp AATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGTGCAATGCGACTGATGAGATCTaGTACCTTACTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: NRLTASVGDLIHTFQGCNATDEI*YLTGFF
Trigger: GAAAAACCCAGTAAGGTATCAGATCTCATCAGTCGC...ATTGCACCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTAGAGAGGAGTTTTTGTTaGGGTGTGGTTGTCAATCCA +
Preference number: 4 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLERSFC*GVVVNP
Trigger: TGGATTGACAACCACACCTCAACAAAAACTCCTCTC...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR TCA 90 bp GAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCGTTTAACTGCCTTGAATAGAAGTATCTaGGCTAAGAGTGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: EHRGNANQQPELENRLTALNRSI*AKSGSF
Trigger: AAAGCTGCCACTCTTAGCTCAGATACTTCTATTCAA...GGCAGTTAAACGATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTACTTCAACCACTGATTTaGACTGGGGAATACGTTCTG +
Preference number: 4 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLLQPLI*TGEYVL
Trigger: CAGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAG...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTCCGAGCAGCTAGTTTaGGGATCTGTCCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKESEQLV*GSVLLL
Trigger: TAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp TTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTTGCAATTGCATTTCTaGAGGTTTCATGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LIHSSLSCAELACSSSVLLQLHF*RFHAFD
Trigger: ATCAAAGGCATGAAACCTTCAGAAATGCAATTGCAA...GAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACGTAGAAACCTCTGAGTaGATGTCATTATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYVETSE*MSLSFA
Trigger: TGCAAAGGATAATGACATTCACTCAGAGGTTTCTAC...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAAAGCAGTAGAAACCTCTaGGTGAATGTCATTATCCTT +
Preference number: 4 (lower is better)
Translates to: SINANPGSNCEFRAYQAESSRNL*VNVIIL
Trigger: AAGGATAATGACATTCACTCAGAGGTTTCTACTGCT...TTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTTCGTGTCAGTGCATTaGAAGGTTCTTTACATTTCA +
Preference number: 4 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPFVSVH*KVLYIS
Trigger: TGAAATGTAAAGAACCTTTCAATGCACTGACACGAA...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp ACTGATTTGAACTGGGGAATACGTTCTGTCATGTTTTTAACCAATTCCATTGCACCACATGCTCGACAATaGTGCCTCCTTCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TDLNWGIRSVMFLTNSIAPHARQ*CLLRVS
Trigger: ACTGACACGAAGGAGGCATCATTGTCGAGCATGTGG...TGCAATGGAATTGGTTAAAAACATGACAGAACGTATTCCCCAGTTCAAATCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp ATTAGGGATACAGCACCAACATCTAGAGCAACAAGGAACATTTTCTTTCTATGTCATTCCGGTGGGGAGTaGACAGATGGTGGATTCCAT +
Preference number: 4 (lower is better)
Translates to: IRDTAPTSRATRNIFFLCHSGGE*TDGGFH
Trigger: ATGGAATCCACCATCTGTTCACTCCCCACCGGAATG...ACATAGAAAGAAAATGTTCCTTGTTGCTCTAGATGTTGGTGCTGTATCCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp AATATCTGCTTAGAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCCAGTGTGGGTGATCTaGTTCATACATTTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: NICLEHRGNANQQPELENPVWVI*FIHFRG
Trigger: ACCCCTGAAATGTATGAATCAGATCACCCACACTGG...ATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTCTAAGCAGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGGACGAAGGTGAATTCTaGAGGTGTAATGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LENRLTASVGDLIHTFQGDEGEF*RCNGFG
Trigger: TCCAAAGCCATTACACCTGCAGAATTCACCTTCGTC...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACTTCCATCTGGTTTTGTaGTGCCATTACACCGTTGGC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDFHLVL*CHYTVG
Trigger: GCCAACGGTGTAATGGCAGCACAAAACCAGATGGAA...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp TTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAATTTATTCACCATCTCTaGTGGAAACGAGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: FHSINANPGSNCEFRAYQFIHHL*WKRASV
Trigger: AACCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAA...TTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACCATCTTAAGGAATGGTaGCAATTTCTGAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYHLKEW*QFLKDV
Trigger: GACATCCTTCAGAAATTGGCACCATTCCTTAAGATG...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp TACAATTTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCCATTCTTCTTTGTCTTaGGCAGAACTGGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: YNFHSINANPGSNCEFRAHSSLS*AELACS
Trigger: ACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATG...GGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACACATTCTTCTTTGTCTTaGGCAGAACTGGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTHSSLS*AELACS
Trigger: ACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATG...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGCATTCTTCTTTGTCTTaGGCAGAACTGGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVHSSLS*AELACS
Trigger: ACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATG...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGGGTCAAAAACCTGGGTaGAATGGATCCCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVGQKPG*NGSHQH
Trigger: ATGCTGATGGGATCCATTGCACCCAGGTTTTTGACC...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACAAGGCATGAGCCACTATaGCCGGCCTATGCTTATTTT +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTRHEPL*PAYAYF
Trigger: AAAATAAGCATAGGCCGGGCATAGTGGCTCATGCCT...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAATGGTTGTGCTGCTTGTaGAGCAAGGTGGAACTAAAG +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREWLCCL*SKVELK
Trigger: CTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCA...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATGGTTGTGCTGCTTGTaGAGCAAGGTGGAACTAAAG +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTWLCCL*SKVELK
Trigger: CTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp AATATCTGCTTAGAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATGTGATGCAGGAGCTGTaGCAGTTTCATCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: NICLEHRGNANQQPELENVMQEL*QFHLFL
Trigger: GAGAAAGAGATGAAACTGCCACAGCTCCTGCATCAC...ATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTCTAAGCAGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAACACTGGGCCTATGCCTaGAGTCCTGTAGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKHWAYA*SPVATV
Trigger: GACAGTAGCTACAGGACTCCAGGCATAGGCCCAGTG...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAATTCACCATCTCTGCTaGAAACGAGCCTCGGTTTGC +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEIHHLC*KRASVC
Trigger: GCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TTCTTTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCCAAGAGGGTCTTGCTTaGGGATCACACACCAAGCTT +
Preference number: 4 (lower is better)
Translates to: FFTFHTHCHFIISDPSWGQEGLA*GSHTKL
Trigger: AAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG...GCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAACAAGAGGGTCTTGCTTaGGGATCACACACCAAGCTT +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEQEGLA*GSHTKL
Trigger: AAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTGCACGGACTTAGACTaGGTCAGTTTGAAACTGTGT +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKECTDLD*VSLKLC
Trigger: ACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp ATTAGGGATACAGCACCAACATCTAGAGCAACAAGGAACATTTTCTTTCTATGTTCTACCTTCATCTCATaGTGCTGGTCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IRDTAPTSRATRNIFFLCSTFIS*CWSSCS
Trigger: GGAGCAGCTGGACCAGCACCATGAGATGAAGGTAGA...ACATAGAAAGAAAATGTTCCTTGTTGCTCTAGATGTTGGTGCTGTATCCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp TGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACGAAGTCACAAATGGTTaGAGTAAAACTCCCTTCATT +
Preference number: 4 (lower is better)
Translates to: CLGITHQAFCQGFDFSIYEVTNG*SKTPFI
Trigger: AATGAAGGGAGTTTTACTTCAACCATTTGTGACTTC...GTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACAACTGGGTTTTTCTTTTaGGACACAAGAAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTTGFFF*DTRSRG
Trigger: GCCTCTGCTTCTTGTGTCTCAAAAGAAAAACCCAGT...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp TACAATTTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCGCGACTGATGAGATCTaGTACCTTACTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: YNFHSINANPGSNCEFRAATDEI*YLTGFF
Trigger: GAAAAACCCAGTAAGGTATCAGATCTCATCAGTCGC...GGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAATTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAGAGGAGTTTTTGTTaGGGTGTGGTTGTCAATCCA +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREERSFC*GVVVNP
Trigger: TGGATTGACAACCACACCTCAACAAAAACTCCTCTC...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACGAGAGGAGTTTTTGTTaGGGTGTGGTTGTCAATCCA +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDERSFC*GVVVNP
Trigger: TGGATTGACAACCACACCTCAACAAAAACTCCTCTC...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGCAAGTCTGTGCACCCTaGGTCTTATCTGTATCATTT +
Preference number: 4 (lower is better)
Translates to: LENRLTASVGDLIHTFQGQVCAP*VLSVSF
Trigger: AAATGATACAGATAAGACTCAGGGTGCACAGACTTG...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACCTTCAACCACTGATTTaGACTGGGGAATACGTTCTG +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDLQPLI*TGEYVL
Trigger: CAGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAG...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGCTTCAACCACTGATTTaGACTGGGGAATACGTTCTG +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVLQPLI*TGEYVL
Trigger: CAGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAG...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACACAGGTTCTAGCATGTaGTGCTGCAAAGTTAAGCTC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDTGSSM*CCKVKL
Trigger: GAGCTTAACTTTGCAGCATCACATGCTAGAACCTGT...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAGCATCGATGGTTTCTTaGAGGGCCTTGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEASMVS*RALIHS
Trigger: AGAATGGATCAAGGCCCTTCAAGAAACCATCGATGC...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACGACTTCTCCATATACTaGAGAAAGCTGCACACCACA +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDDFSIY*RKLHTT
Trigger: TGTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTC...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGGACTTCTCCATATACTaGAGAAAGCTGCACACCACA +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVDFSIY*RKLHTT
Trigger: TGTGGTGTGCAGCTTTCTTCAGTATATGGAGAAGTC...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp TTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTGTTCTACAGATTTTaGGTCCGCTGTCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: LHFIHIVTSLSRIHLGALLFYRF*VRCPLA
Trigger: AGCGAGTGGACAGCGGACTCAAAATCTGTAGAACAA...AAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395740.5
CDS-3UTR TCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAATTCTTAGGTTCAGGATaGTCATCCAAGGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEFLGSG*SSKVAG
Trigger: TCCAGCCACCTTGGATGATCATCCTGAACCTAAGAA...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATTTGAGCTGTAAGTCCTaGGACCTCCACACCATGGCT +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYLSCKS*DLHTMA
Trigger: AGCCATGGTGTGGAGGTCTCAGGACTTACAGCTCAA...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTCTCTTTGCGTTTAGCTaGAGAATGTGGGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDILFAFS*RMWGGK
Trigger: CTTTCCACCCCACATTCTTCAGCTAAACGCAAAGAG...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACTTAAAATCCAAGGAATaGTGCCCCTTCCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDLKSKE*CPFPFP
Trigger: GGGAAATGGGAAGGGGCATCATTCCTTGGATTTTAA...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGAACTGCCAGTGTGGGTaGTCTGATTCATACATTTCA +
Preference number: 4 (lower is better)
Translates to: LENRLTASVGDLIHTFQGNCQCG*SDSYIS
Trigger: TGAAATGTATGAATCAGATCACCCACACTGGCAGTT...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAACAACCAGTGTGGTTGTaGTGCTTGTGGAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKQPVWL*CLWSKV
Trigger: CACCTTGCTCCACAAGCAGCACAACCACACTGGTTG...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGCTAGGTAAAGCTTTATaGCTGGGGGTTTGGTGTATA +
Preference number: 4 (lower is better)
Translates to: LENRLTASVGDLIHTFQGLGKAL*LGVWCI
Trigger: TATACACCAAACCCCCAGGCATAAAGCTTTACCTAG...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAATTCCATCTGGTTTTGTaGTGCCATTACACCGTTGGC +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEFHLVL*CHYTVG
Trigger: GCCAACGGTGTAATGGCAGCACAAAACCAGATGGAA...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGTCTCCATTCACTATGTaGGTATCAAGCAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LENRLTASVGDLIHTFQGSPFTM*VSSKGS
Trigger: TGAACCCTTGCTTGATACGCACATAGTGAATGGAGA...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTCTCCATTCACTATGTaGGTATCAAGCAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKESPFTM*VSSKGS
Trigger: TGAACCCTTGCTTGATACGCACATAGTGAATGGAGA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp TACAATTTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTTTATTCACCATCTCTaGTGGAAACGAGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: YNFHSINANPGSNCEFRAFIHHL*WKRASV
Trigger: AACCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAA...GGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATTTATTCACCATCTCTaGTGGAAACGAGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTFIHHL*WKRASV
Trigger: AACCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGGTAGTTTCCCATTCTTaGATTCGTTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEVVSHS*IRFSSS
Trigger: AGAGCTGGAGAAACGAATGCAAGAATGGGAAACTAC...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATTGCGCAGAACTGGCCTaGAGTTCCAGTGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYCAELA*SSSVLS
Trigger: AGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCA...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACAACCACATATCCACATaGTCGACAATGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDNHIST*STMMPP
Trigger: AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTTATACTGAAGAAAGCTaGACACCACACTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEIYTEES*TPHCFQ
Trigger: CTGGAAACAGTGTGGTGTGCAGCTTTCTTCAGTATA...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTTATCTTAAAACACATTaGTGTGGTCTGGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEIYLKTH*CGLETS
Trigger: GCTGGTCTCCAGACCACAGCAATGTGTTTTAAGATA...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGGAAGTGTGTGACTACTaGTTATTGGGTAACAATCGC +
Preference number: 4 (lower is better)
Translates to: LENRLTASVGDLIHTFQGEVCDY*LLGNNR
Trigger: GCGATTGTTACCCAATAAGCAGTAGTCACACACTTC...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp AATATCTGCTTAGAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATTTATGCCTGGGGGTTTaGTGTATATTGGACGAAGGT +
Preference number: 4 (lower is better)
Translates to: NICLEHRGNANQQPELENLCLGV*CILDEG
Trigger: ACCTTCGTCCAATATACACCAAACCCCCAGGCATAA...ATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTCTAAGCAGATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGGTAAAGCTTTATGCCTaGGGGTTTGGTGTATATTGG +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEVKLYA*GFGVYW
Trigger: CCAATATACACCAAACCCCCAGGCATAAAGCTTTAC...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGGTTTTTGTTGAGGTGTaGTTGTCAATCCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEVFVEV*LSIHAF
Trigger: GAAGGCATGGATTGACAACCACACCTCAACAAAAAC...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGTCCTCACATTCCATCTaGTTTTGTGCTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: LENRLTASVGDLIHTFQGSSHSI*FCAAIT
Trigger: TGTAATGGCAGCACAAAACCAGATGGAATGTGAGGA...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTCCTCACATTCCATCTaGTTTTGTGCTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKESSHSI*FCAAIT
Trigger: TGTAATGGCAGCACAAAACCAGATGGAATGTGAGGA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAGTGATGCAGGAGCTGTaGCAGTTTCATCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEVMQEL*QFHLFL
Trigger: GAGAAAGAGATGAAACTGCCACAGCTCCTGCATCAC...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp CACACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTCCCTCTCTTGTACCTTaGTTTCTGTTTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: HTTLFPDTSADSISKIPFPSLVP*FLFLPL
Trigger: GAGGGGCAGAAACAGAAACCAAGGTACAAGAGAGGG...AAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTACCACTGATTTGAACTaGGGAATACGTTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEITTDLN*GIRSVM
Trigger: CATGACAGAACGTATTCCCCAGTTCAAATCAGTGGT...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAACAGTTTGAAACTGTGTaGCAGGTCTGCGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKQFETV*QVCAPW
Trigger: CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTG...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACTGCACGGACTTAGACTaGGTCAGTTTGAAACTGTGT +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDCTDLD*VSLKLC
Trigger: ACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCA...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp TCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCTTTACATTTCATTGCACGGACTTAGACTaGGTCAGTTTGAAACTGTGT +
Preference number: 4 (lower is better)
Translates to: STMMPPSCQCIERFFTFHCTDLD*VSLKLC
Trigger: ACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCA...ATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp GTTTCTCCAGCTCTGGCAAGAGGAATTTACTATGGAAGGCATTTATTGATGAAAGATGATCATCCAAGGTaGCTGGATGCTCATTTGGAC +
Preference number: 4 (lower is better)
Translates to: VSPALARGIYYGRHLLMKDDHPR*LDAHLD
Trigger: GTCCAAATGAGCATCCAGCCACCTTGGATGATCATC...TTTCATCAATAAATGCCTTCCATAGTAAATTCCTCTTGCCAGAGCTGGAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTGATGATCATCCAAGGTaGCTGGATGCTCATTTGGAC +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIDDHPR*LDAHLD
Trigger: GTCCAAATGAGCATCCAGCCACCTTGGATGATCATC...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAGATGATCATCCAAGGTaGCTGGATGCTCATTTGGAC +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEDDHPR*LDAHLD
Trigger: GTCCAAATGAGCATCCAGCCACCTTGGATGATCATC...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTTTTACTTGCTCCGGTTaGTGCTTGCTACTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIFTCSG*CLLLRL
Trigger: CAACCTGAGTAGCAAGCACCAACCGGAGCAAGTAAA...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp TTCCACACTGTTCTGACTCCTGAAATTACAACAGAGATATTAACAGAAACTACACTTTGGACTTGCAGCTaGGTGTTTTGCTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: FHTVLTPEITTEILTETTLWTCS*VFCWPV
Trigger: AACAGGCCAGCAAAACACTCAGCTGCAAGTCCAAAG...TGTAGTTTCTGTTAATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTGCGACTGATGAGATCTaGTACCTTACTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIATDEI*YLTGFF
Trigger: GAAAAACCCAGTAAGGTATCAGATCTCATCAGTCGC...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp TCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCTTTACATTTCATCAAGTCTGTGCACCCTaGGTCTTATCTGTATCATTT +
Preference number: 4 (lower is better)
Translates to: STMMPPSCQCIERFFTFHQVCAP*VLSVSF
Trigger: AAATGATACAGATAAGACTCAGGGTGCACAGACTTG...ATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR TCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGCAAGTCTGTGCACCCTaGGTCTTATCTGTATCATTT +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVQVCAP*VLSVSF
Trigger: AAATGATACAGATAAGACTCAGGGTGCACAGACTTG...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACACAAGTCTGTGCACCCTaGGTCTTATCTGTATCATTT +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTQVCAP*VLSVSF
Trigger: AAATGATACAGATAAGACTCAGGGTGCACAGACTTG...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTTGAATAGAAGTATCTaGGCTAAGAGTGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKELNRSI*AKSGSF
Trigger: AAAGCTGCCACTCTTAGCTCAGATACTTCTATTCAA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAACAGGTTCTAGCATGTaGTGCTGCAAAGTTAAGCTC +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCETGSSM*CCKVKL
Trigger: GAGCTTAACTTTGCAGCATCACATGCTAGAACCTGT...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTTCCGAGCAGCTAGTTTaGGGATCTGTCCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDISEQLV*GSVLLL
Trigger: TAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGA...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp ACTGATTTGAACTGGGGAATACGTTCTGTCATGTTTTTAACCAATTCCATTGCAGCATCGATGGTTTCTTaGAGGGCCTTGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: TDLNWGIRSVMFLTNSIAASMVS*RALIHS
Trigger: AGAATGGATCAAGGCCCTTCAAGAAACCATCGATGC...TGCAATGGAATTGGTTAAAAACATGACAGAACGTATTCCCCAGTTCAAATCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGGTAGAAACCTCTGAGTaGATGTCATTATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEVETSE*MSLSFA
Trigger: TGCAAAGGATAATGACATTCACTCAGAGGTTTCTAC...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTAGCAGTAGAAACCTCTaGGTGAATGTCATTATCCTT +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEISSRNL*VNVIIL
Trigger: AAGGATAATGACATTCACTCAGAGGTTTCTACTGCT...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp TTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAATTTCTGCCAAGGTTTTaGCTTCTCCATATACTGAAG +
Preference number: 4 (lower is better)
Translates to: FHSINANPGSNCEFRAYQFLPRF*LLHILK
Trigger: CTTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAA...TTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACACAAGTACAAAAGAGTaGAGAGCAGCCTTCATGACA +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDTSTKE*RAAFMT
Trigger: TGTCATGAAGGCTGCTCTTCACTCTTTTGTACTTGT...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTCATCAATCACACTTTaGGGTCTCTTGGTTGAATTG +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKESSITL*GLLVEL
Trigger: CAATTCAACCAAGAGACCTCAAAGTGTGATTGATGA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACGATGTCAATACAGTCTaGAGAATAGGAACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDDVNTV*RIGTGW
Trigger: CCAACCAGTTCCTATTCTTCAGACTGTATTGACATC...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp ATTAGGGATACAGCACCAACATCTAGAGCAACAAGGAACATTTTCTTTCTATGTTCAGCAGCCAGAGCTTaGAAATCGTTTAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: IRDTAPTSRATRNIFFLCSAARA*KSFNCQ
Trigger: CTGGCAGTTAAACGATTTTCAAGCTCTGGCTGCTGA...ACATAGAAAGAAAATGTTCCTTGTTGCTCTAGATGTTGGTGCTGTATCCCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp TTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTGACGAAGGTGAATTCTaGAGGTGTAATGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LHFIHIVTSLSRIHLGALDEGEF*RCNGFG
Trigger: TCCAAAGCCATTACACCTGCAGAATTCACCTTCGTC...AAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAGACGAAGGTGAATTCTaGAGGTGTAATGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEDEGEF*RCNGFG
Trigger: TCCAAAGCCATTACACCTGCAGAATTCACCTTCGTC...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp TCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCTTTACATTTCATCTAGGTAAAGCTTTATaGCTGGGGGTTTGGTGTATA +
Preference number: 4 (lower is better)
Translates to: STMMPPSCQCIERFFTFHLGKAL*LGVWCI
Trigger: TATACACCAAACCCCCAGGCATAAAGCTTTACCTAG...ATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGCTAGGTAAAGCTTTATaGCTGGGGGTTTGGTGTATA +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVLGKAL*LGVWCI
Trigger: TATACACCAAACCCCCAGGCATAAAGCTTTACCTAG...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp TTCCACACTGTTCTGACTCCTGAAATTACAACAGAGATATTAACAGAAACTACAGGCCACACAAGTCTGTaGACCCTGAGTCTTATCTGT +
Preference number: 4 (lower is better)
Translates to: FHTVLTPEITTEILTETTGHTSL*TLSLIC
Trigger: ACAGATAAGACTCAGGGTGCACAGACTTGTGTGGCC...TGTAGTTTCTGTTAATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp TTCCACACTGTTCTGACTCCTGAAATTACAACAGAGATATTAACAGAAACTACACATCTGGTTTTGTGCTaGCATTACACCGTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: FHTVLTPEITTEILTETTHLVLC*HYTVGH
Trigger: GTGGCCAACGGTGTAATGGCAGCACAAAACCAGATG...TGTAGTTTCTGTTAATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp TACAATTTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTTTTCATTCCATCAATaGCAACCCTGGTTCGAACTG +
Preference number: 4 (lower is better)
Translates to: YNFHSINANPGSNCEFRAFSFHQ*QPWFEL
Trigger: CAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAA...GGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACTTTTCATTCCATCAATaGCAACCCTGGTTCGAACTG +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDFSFHQ*QPWFEL
Trigger: CAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAA...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGCCTCCTTCGTGTCAGTaGATTGAAAGGTTCTTTACA +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVPPSCQ*IERFFT
Trigger: TGTAAAGAACCTTTCAATGCACTGACACGAAGGAGG...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GTTTCTCCAGCTCTGGCAAGAGGAATTTACTATGGAAGGCATTTATTGATGAAAAACCACATATCCACATaGTCGACAATGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VSPALARGIYYGRHLLMKNHIST*STMMPP
Trigger: AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT...TTTCATCAATAAATGCCTTCCATAGTAAATTCCTCTTGCCAGAGCTGGAGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGGTAAGGCTGTTTCACTaGTTCTCTTTGCGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVVRLFH*FSLRLA
Trigger: AGCTAAACGCAAAGAGAAGCAGTGAAACAGCCTTAC...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATTAGGTTGTCATGACTaGTCAAGTATGTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTLGCHD*SSMLEG
Trigger: CCCTTCCAACATACTTGAGCAGTCATGACAACCTAA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGCTGCATTCTGCCAAATaGTCAGTCCAGAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVLHSAK*SVQKVE
Trigger: TTCTACTTTCTGGACTGAGCATTTGGCAGAATGCAG...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACAGGGTTTGGTGTATATTaGACGAAGGTGAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTGFGVY*TKVNSA
Trigger: TGCAGAATTCACCTTCGTCCAATATACACCAAACCC...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp TTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTATGCCTGGGGGTTTaGTGTATATTGGACGAAGGT +
Preference number: 4 (lower is better)
Translates to: LHFIHIVTSLSRIHLGALLCLGV*CILDEG
Trigger: ACCTTCGTCCAATATACACCAAACCCCCAGGCATAA...AAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTTTATGCCTGGGGGTTTaGTGTATATTGGACGAAGGT +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDILCLGV*CILDEG
Trigger: ACCTTCGTCCAATATACACCAAACCCCCAGGCATAA...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp AATATCTGCTTAGAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATGTAAAGCTTTATGCCTaGGGGTTTGGTGTATATTGG +
Preference number: 4 (lower is better)
Translates to: NICLEHRGNANQQPELENVKLYA*GFGVYW
Trigger: CCAATATACACCAAACCCCCAGGCATAAAGCTTTAC...ATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTCTAAGCAGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACACCACTGATTTGAACTaGGGAATACGTTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDTTDLN*GIRSVM
Trigger: CATGACAGAACGTATTCCCCAGTTCAAATCAGTGGT...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACATTGCACTATTAGAATaGCTTGCTGCTGTAGATATA +
Preference number: 4 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYIALLE*LAAVDI
Trigger: TATATCTACAGCAGCAAGCCATTCTAATAGTGCAAT...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATATCATCCAAGGTGGCTaGATGCTCATTTGGACCACC +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYIIQGG*MLIWTT
Trigger: GGTGGTCCAAATGAGCATCCAGCCACCTTGGATGAT...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGCTGAAGAATAGGAACTaGTTGGCCACAGTTCATATA +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKELKNRN*LATVHI
Trigger: TATATGAACTGTGGCCAACCAGTTCCTATTCTTCAG...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACAAAAACCTGGGTGCAATaGATCCCATCAGCATGTAAT +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTKTWVQ*IPSACN
Trigger: ATTACATGCTGATGGGATCCATTGCACCCAGGTTTT...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp AATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGTGCAATGTGACTACTGCTTATTaGGTAACAATCGCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: NRLTASVGDLIHTFQGCNVTTAY*VTIAVF
Trigger: AAAGACAGCGATTGTTACCCAATAAGCAGTAGTCAC...ATTGCACCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGGAAGTCACAAATGGTTaGAGTAAAACTCCCTTCATT +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEEVTNG*SKTPFI
Trigger: AATGAAGGGAGTTTTACTTCAACCATTTGTGACTTC...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546442.5
CDS-3UTR TCA 90 bp TCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCTTTACATTTCATCTGCCTTATAAAAGCTaGATTTATTCCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: STMMPPSCQCIERFFTFHLPYKS*IYSSWP
Trigger: TGGCCAAGAGGAATAAATTCAGCTTTTATAAGGCAG...ATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAACTGCCTTATAAAAGCTaGATTTATTCCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCERELPYKS*IYSSWP
Trigger: TGGCCAAGAGGAATAAATTCAGCTTTTATAAGGCAG...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546442.5
CDS-3UTR TCA 90 bp ATTAGGGATACAGCACCAACATCTAGAGCAACAAGGAACATTTTCTTTCTATGTACTGGGTTTTTCTTTTaGGACACAAGAAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: IRDTAPTSRATRNIFFLCTGFFF*DTRSRG
Trigger: GCCTCTGCTTCTTGTGTCTCAAAAGAAAAACCCAGT...ACATAGAAAGAAAATGTTCCTTGTTGCTCTAGATGTTGGTGCTGTATCCCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp ATTAGGGATACAGCACCAACATCTAGAGCAACAAGGAACATTTTCTTTCTATGTGAGAGGAGTTTTTGTTaGGGTGTGGTTGTCAATCCA +
Preference number: 4 (lower is better)
Translates to: IRDTAPTSRATRNIFFLCERSFC*GVVVNP
Trigger: TGGATTGACAACCACACCTCAACAAAAACTCCTCTC...ACATAGAAAGAAAATGTTCCTTGTTGCTCTAGATGTTGGTGCTGTATCCCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACAAAGGGTTCAGAAGCTTaGATAGAAGTATCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTKGSEA*IEVSEL
Trigger: TAGCTCAGATACTTCTATTCAAGCTTCTGAACCCTT...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACAAGGGTTCAGAAGCTTaGATAGAAGTATCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDKGSEA*IEVSEL
Trigger: TAGCTCAGATACTTCTATTCAAGCTTCTGAACCCTT...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAAATTTCTTCAACCACTaGTTTGAACTGGGGAATACG +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCERENFFNH*FELGNT
Trigger: CGTATTCCCCAGTTCAAATCAGTGGTTGAAGAAATT...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACAATTTCTTCAACCACTaGTTTGAACTGGGGAATACG +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDNFFNH*FELGNT
Trigger: CGTATTCCCCAGTTCAAATCAGTGGTTGAAGAAATT...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATTTCTTGAAGGGCCTTaGTCCATTCTTCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTFLEGP*SILLCL
Trigger: AAGACAAAGAAGAATGGATCAAGGCCCTTCAAGAAA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATGCATCGATGGTTTCTTaGAGGGCCTTGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYASMVS*RALIHS
Trigger: AGAATGGATCAAGGCCCTTCAAGAAACCATCGATGC...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTTTGCAATTGCATTTCTaGAGGTTTCATGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEILQLHF*RFHAFD
Trigger: ATCAAAGGCATGAAACCTTCAGAAATGCAATTGCAA...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAGCAGTAGAAACCTCTaGGTGAATGTCATTATCCTT +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVSSRNL*VNVIIL
Trigger: AAGGATAATGACATTCACTCAGAGGTTTCTACTGCT...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp TTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAATTCGTGTCAGTGCATTaGAAGGTTCTTTACATTTCA +
Preference number: 4 (lower is better)
Translates to: FHSINANPGSNCEFRAYQFVSVH*KVLYIS
Trigger: TGAAATGTAAAGAACCTTTCAATGCACTGACACGAA...TTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTTCGTGTCAGTGCATTaGAAGGTTCTTTACATTTCA +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEFVSVH*KVLYIS
Trigger: TGAAATGTAAAGAACCTTTCAATGCACTGACACGAA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAATTTCTGCCAAGGTTTTaGCTTCTCCATATACTGAAG +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREFLPRF*LLHILK
Trigger: CTTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAA...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATTTCTGCCAAGGTTTTaGCTTCTCCATATACTGAAG +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTFLPRF*LLHILK
Trigger: CTTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATTTCTTAGGTTCAGGATaGTCATCCAAGGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYFLGSG*SSKVAG
Trigger: TCCAGCCACCTTGGATGATCATCCTGAACCTAAGAA...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGTTTGGGTTTTGGTaGAAATGTTTGTACATGCTG +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEKFGFW*KCLYML
Trigger: CAGCATGTACAAACATTTTCACCAAAACCCAAACTT...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTAATGAAGAAGCAACATaGTCCACTACAGATGTCAAT +
Preference number: 4 (lower is better)
Translates to: RLVLATQVVSSPERSSEINEEAT*STTDVN
Trigger: ATTGACATCTGTAGTGGATCATGTTGCTTCTTCATT...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp TCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCTTTACATTTCATAGTTCTCATGAGATCTaGTGGTTTTGTAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: STMMPPSCQCIERFFTFHSSHEI*WFCKCL
Trigger: CAGACACTTACAAAACCATCAGATCTCATGAGAACT...ATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR TCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAATCATATAACTCCCGGTaGCCCCAACAAGTTAAAACT +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCESYNSR*PQQVKT
Trigger: AGTTTTAACTTGTTGGGGTCACCGGGAGTTATATGA...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATTTTGGGAAAAGGGGTTaGCCATCATATAACTCCCGG +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYFGKRG*PSYNSR
Trigger: CCGGGAGTTATATGATGGTCAACCCCTTTTCCCAAA...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp TTCCACACTGTTCTGACTCCTGAAATTACAACAGAGATATTAACAGAAACTACATTCCATCTGGTTTTGTaGTGCCATTACACCGTTGGC +
Preference number: 4 (lower is better)
Translates to: FHTVLTPEITTEILTETTFHLVL*CHYTVG
Trigger: GCCAACGGTGTAATGGCAGCACAAAACCAGATGGAA...TGTAGTTTCTGTTAATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAATCTCCATTCACTATGTaGGTATCAAGCAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCESPFTM*VSSKGS
Trigger: TGAACCCTTGCTTGATACGCACATAGTGAATGGAGA...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAGTAGTTTCCCATTCTTaGATTCGTTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEVVSHS*IRFSSS
Trigger: AGAGCTGGAGAAACGAATGCAAGAATGGGAAACTAC...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACCATCTTAAGGAATGGTaGCAATTTCTGAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDHLKEW*QFLKDV
Trigger: GACATCCTTCAGAAATTGGCACCATTCCTTAAGATG...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp TTCTTTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCCCTCCTTCGTGTCAGTaGATTGAAAGGTTCTTTACA +
Preference number: 4 (lower is better)
Translates to: FFTFHTHCHFIISDPSWGPPSCQ*IERFFT
Trigger: TGTAAAGAACCTTTCAATGCACTGACACGAAGGAGG...GCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp GTTTCTCCAGCTCTGGCAAGAGGAATTTACTATGGAAGGCATTTATTGATGAAACCTCCTTCGTGTCAGTaGATTGAAAGGTTCTTTACA +
Preference number: 4 (lower is better)
Translates to: VSPALARGIYYGRHLLMKPPSCQ*IERFFT
Trigger: TGTAAAGAACCTTTCAATGCACTGACACGAAGGAGG...TTTCATCAATAAATGCCTTCCATAGTAAATTCCTCTTGCCAGAGCTGGAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR GCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAATATACTGAAGAAAGCTaGACACCACACTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEYTEES*TPHCFQ
Trigger: CTGGAAACAGTGTGGTGTGCAGCTTTCTTCAGTATA...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GATGAAATATTAGAAAAGATTTTATTCACCATCTCTGCTGGAAACGAGCCTCGGGTAAGGCTGTTTCACTaGTTCTCTTTGCGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: DEILEKILFTISAGNEPRVRLFH*FSLRLA
Trigger: AGCTAAACGCAAAGAGAAGCAGTGAAACAGCCTTAC...CCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAAATCTTTTCTAATATTTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR GCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACCCCTTCCTTATACTCTaGAATTCGAATTACCGTATC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDPFLIL*NSNYRI
Trigger: GATACGGTAATTCGAATTGCAGAGTATAAGGAAGGG...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAAACTTGCTCCGGTTGGTaGTTGCTACTCAGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKTCSGW*LLLRLY
Trigger: ATACAACCTGAGTAGCAAGCACCAACCGGAGCAAGT...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp ACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTCTTTGGTTGTGCTGCTTGTaGAGCAAGGTGGAACTAAAG +
Preference number: 4 (lower is better)
Translates to: TTLFPDTSADSISKIPFLWLCCL*SKVELK
Trigger: CTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCA...AAGAAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp TTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTGTAAAGCTTTATGCCTaGGGGTTTGGTGTATATTGG +
Preference number: 4 (lower is better)
Translates to: LHFIHIVTSLSRIHLGALVKLYA*GFGVYW
Trigger: CCAATATACACCAAACCCCCAGGCATAAAGCTTTAC...AAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTGTTTTTGTTGAGGTGTaGTTGTCAATCCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIVFVEV*LSIHAF
Trigger: GAAGGCATGGATTGACAACCACACCTCAACAAAAAC...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAAGTGATGCAGGAGCTGTaGCAGTTTCATCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKVMQEL*QFHLFL
Trigger: GAGAAAGAGATGAAACTGCCACAGCTCCTGCATCAC...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAATATGTCAGCAATAATTaGTTCACTTGCTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREYVSNN*FTCSFG
Trigger: CCCAAAGGAGCAAGTGAACCAATTATTGCTGACATA...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTATGTGCCACCACACCTaGCTAATTTTTGTAGAGACA +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIMCHHT*LIFVET
Trigger: TGTCTCTACAAAAATTAGCCAGGTGTGGTGGCACAT...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
3UTR CAA 72 bp AAGTTTACTTGCTCCGGTTGGTGCTTGCTACTCAGGTaGTATCTAGTCCAGAAAGATCATCAGAAATTTATC +
Preference number: 4 (lower is better)
Translates to: KFTCSGWCLLLR*YLVQKDHQKFI
Trigger: GATAAATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCGGAGCAAGTAAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427716.6
ENST00000531134.6
ENST00000534526.7
3UTR CAA 72 bp TTTTATTCACCATCTCTGCTGGAAACGAGCCTCGGTTaGCTTCTTCCAACAGTTTGCAATAAAATACCTGAT +
Preference number: 4 (lower is better)
Translates to: FYSPSLLETSLG*LLPTVCNKIPD
Trigger: ATCAGGTATTTTATTGCAAACTGTTGGAAGAAGCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551984.5
CDS-3UTR TCA 90 bp CACACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTCAAGTCTGTGCACCCTaGGTCTTATCTGTATCATTT +
Preference number: 4 (lower is better)
Translates to: HTTLFPDTSADSISKIPFQVCAP*VLSVSF
Trigger: AAATGATACAGATAAGACTCAGGGTGCACAGACTTG...AAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR TCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTTTGAATAGAAGTATCTaGGCTAAGAGTGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDILNRSI*AKSGSF
Trigger: AAAGCTGCCACTCTTAGCTCAGATACTTCTATTCAA...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACACAGCAACATGTTGTTaGATAAGAAAAGGTAGCGTT +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDTATCC*IRKGSV
Trigger: AACGCTACCTTTTCTTATTCAACAACATGTTGCTGT...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATTGCAATTGCATTTCTaGAGGTTTCATGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTLQLHF*RFHAFD
Trigger: ATCAAAGGCATGAAACCTTCAGAAATGCAATTGCAA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GTTTCTCCAGCTCTGGCAAGAGGAATTTACTATGGAAGGCATTTATTGATGAAAGTAGAAACCTCTGAGTaGATGTCATTATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VSPALARGIYYGRHLLMKVETSE*MSLSFA
Trigger: TGCAAAGGATAATGACATTCACTCAGAGGTTTCTAC...TTTCATCAATAAATGCCTTCCATAGTAAATTCCTCTTGCCAGAGCTGGAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATTCGTGTCAGTGCATTaGAAGGTTCTTTACATTTCA +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTFVSVH*KVLYIS
Trigger: TGAAATGTAAAGAACCTTTCAATGCACTGACACGAA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACAACTTTATCGGTAGAATaGCTCTGCACACTAATTTCA +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTTLSVE*LCTLIS
Trigger: TGAAATTAGTGTGCAGAGTCATTCTACCGATAAAGT...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAACTTTATCGGTAGAATaGCTCTGCACACTAATTTCA +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCERETLSVE*LCTLIS
Trigger: TGAAATTAGTGTGCAGAGTCATTCTACCGATAAAGT...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACAGGTGACAGAATCAATTaGTACACCATTTCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTGDRIN*YTISSR
Trigger: TCTTGAAGAAATGGTGTATCAATTGATTCTGTCACC...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACGGTGACAGAATCAATTaGTACACCATTTCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDGDRIN*YTISSR
Trigger: TCTTGAAGAAATGGTGTATCAATTGATTCTGTCACC...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACTGGTACATTAAAAAGTaGCAATGTTTGGGGTATGAC +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDWYIKK*QCLGYD
Trigger: GTCATACCCCAAACATTGTCACTTTTTAATGTACCA...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACACTTCTCATGACTACGTaGTTAAGGGGTATATATAAG +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTLLMTT*LRGIYK
Trigger: CTTATATATACCCCTTAATCACGTAGTCATGAGAAG...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp AATATCTGCTTAGAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCACTGTTCTGACTCCTaGAATTACAACAGAGATATT +
Preference number: 4 (lower is better)
Translates to: NICLEHRGNANQQPELENHCSDS*NYNRDI
Trigger: AATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTG...ATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTCTAAGCAGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp CACACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTGTAGTTTCCCATTCTTaGATTCGTTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HTTLFPDTSADSISKIPFVVSHS*IRFSSS
Trigger: AGAGCTGGAGAAACGAATGCAAGAATGGGAAACTAC...AAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR GCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAAAACCACATATCCACATaGTCGACAATGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKNHIST*STMMPP
Trigger: AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGCACAAATATATCCCATaGCACATAAATTACCGCTTA +
Preference number: 4 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEHKYIP*HINYRL
Trigger: TAAGCGGTAATTTATGTGGCATGGGATATATTTGTG...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTAAAGATACTGCATTCTaGCAAATGCTCAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIKDTAF*QMLSPE
Trigger: TTCTGGACTGAGCATTTGGCAGAATGCAGTATCTTT...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp CACACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTTCCTCACATTCCATCTaGTTTTGTGCTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: HTTLFPDTSADSISKIPFSSHSI*FCAAIT
Trigger: TGTAATGGCAGCACAAAACCAGATGGAATGTGAGGA...AAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR TCA 90 bp GATGAAATATTAGAAAAGATTTTATTCACCATCTCTGCTGGAAACGAGCCTCGGGAAGTCACAAATGGTTaGAGTAAAACTCCCTTCATT +
Preference number: 4 (lower is better)
Translates to: DEILEKILFTISAGNEPREVTNG*SKTPFI
Trigger: AATGAAGGGAGTTTTACTTCAACCATTTGTGACTTC...CCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAAATCTTTTCTAATATTTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp ACTGATTTGAACTGGGGAATACGTTCTGTCATGTTTTTAACCAATTCCATTGCATTGAATAGAAGTATCTaGGCTAAGAGTGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: TDLNWGIRSVMFLTNSIALNRSI*AKSGSF
Trigger: AAAGCTGCCACTCTTAGCTCAGATACTTCTATTCAA...TGCAATGGAATTGGTTAAAAACATGACAGAACGTATTCCCCAGTTCAAATCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR TCA 90 bp ATTAGGGATACAGCACCAACATCTAGAGCAACAAGGAACATTTTCTTTCTATGTAAGGGTTCAGAAGCTTaGATAGAAGTATCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: IRDTAPTSRATRNIFFLCKGSEA*IEVSEL
Trigger: TAGCTCAGATACTTCTATTCAAGCTTCTGAACCCTT...ACATAGAAAGAAAATGTTCCTTGTTGCTCTAGATGTTGGTGCTGTATCCCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAACAGCAACATGTTGTTaGATAAGAAAAGGTAGCGTT +
Preference number: 4 (lower is better)
Translates to: ILATWRYIFQTVPGPTCETATCC*IRKGSV
Trigger: AACGCTACCTTTTCTTATTCAACAACATGTTGCTGT...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR TCA 90 bp TTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTACAGCAACATGTTGTTaGATAAGAAAAGGTAGCGTT +
Preference number: 4 (lower is better)
Translates to: LHFIHIVTSLSRIHLGALTATCC*IRKGSV
Trigger: AACGCTACCTTTTCTTATTCAACAACATGTTGCTGT...AAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp GTTTCTCCAGCTCTGGCAAGAGGAATTTACTATGGAAGGCATTTATTGATGAAATTCGTGTCAGTGCATTaGAAGGTTCTTTACATTTCA +
Preference number: 4 (lower is better)
Translates to: VSPALARGIYYGRHLLMKFVSVH*KVLYIS
Trigger: TGAAATGTAAAGAACCTTTCAATGCACTGACACGAA...TTTCATCAATAAATGCCTTCCATAGTAAATTCCTCTTGCCAGAGCTGGAGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR TCA 90 bp TTCCACACTGTTCTGACTCCTGAAATTACAACAGAGATATTAACAGAAACTACAGTTTCCACACTGTTCTaGCTCCTGAAATTACAACAG +
Preference number: 4 (lower is better)
Translates to: FHTVLTPEITTEILTETTVSTLF*LLKLQQ
Trigger: CTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAAAC...TGTAGTTTCTGTTAATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATTTTTCATTCCATCAATaGCAACCCTGGTTCGAACTG +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYFSFHQ*QPWFEL
Trigger: CAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAA...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATCCTCCTTCGTGTCAGTaGATTGAAAGGTTCTTTACA +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYPPSCQ*IERFFT
Trigger: TGTAAAGAACCTTTCAATGCACTGACACGAAGGAGG...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR GCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACCACAAATATATCCCATaGCACATAAATTACCGCTTA +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDHKYIP*HINYRL
Trigger: TAAGCGGTAATTTATGTGGCATGGGATATATTTGTG...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR GCA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTAATAATTGGTTCACTTaGTCCTTTGGGGTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: ELRPTGNVGFNGKATNDINNWFT*SFGVEK
Trigger: TTTTTCCACCCCAAAGGAGCAAGTGAACCAATTATT...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATTCCTCACATTCCATCTaGTTTTGTGCTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYSSHSI*FCAAIT
Trigger: TGTAATGGCAGCACAAAACCAGATGGAATGTGAGGA...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp ACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTCTTACCACTGATTTGAACTaGGGAATACGTTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: TTLFPDTSADSISKIPFLTTDLN*GIRSVM
Trigger: CATGACAGAACGTATTCCCCAGTTCAAATCAGTGGT...AAGAAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACAATTGCACTATTAGAATaGCTTGCTGCTGTAGATATA +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTIALLE*LAAVDI
Trigger: TATATCTACAGCAGCAAGCCATTCTAATAGTGCAAT...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGATTGCACTATTAGAATaGCTTGCTGCTGTAGATATA +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVIALLE*LAAVDI
Trigger: TATATCTACAGCAGCAAGCCATTCTAATAGTGCAAT...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAACTGTATTTTTCACCATaGATCTATTTTGGCAACATG +
Preference number: 4 (lower is better)
Translates to: ATWRYIFQTVPGPTCERELYFSP*IYFGNM
Trigger: CATGTTGCCAAAATAGATCCATGGTGAAAAATACAG...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACACTGTATTTTTCACCATaGATCTATTTTGGCAACATG +
Preference number: 4 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTLYFSP*IYFGNM
Trigger: CATGTTGCCAAAATAGATCCATGGTGAAAAATACAG...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CCA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACCTGATAATCCTTTTATaGAGGAAGGGAACCTATTAT +
Preference number: 4 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDLIILL*RKGTYY
Trigger: ATAATAGGTTCCCTTCCTCCATAAAAGGATTATCAG...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGTTATCTATATTCTTGTaGGAAGGGGCCTTCATATTA +
Preference number: 4 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVLSIFL*EGAFIL
Trigger: TAATATGAAGGCCCCTTCCCACAAGAATATAGATAA...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp ATTAGGGATACAGCACCAACATCTAGAGCAACAAGGAACATTTTCTTTCTATGTGAAGTCACAAATGGTTaGAGTAAAACTCCCTTCATT +
Preference number: 4 (lower is better)
Translates to: IRDTAPTSRATRNIFFLCEVTNG*SKTPFI
Trigger: AATGAAGGGAGTTTTACTTCAACCATTTGTGACTTC...ACATAGAAAGAAAATGTTCCTTGTTGCTCTAGATGTTGGTGCTGTATCCCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp TTCCACACTGTTCTGACTCCTGAAATTACAACAGAGATATTAACAGAAACTACACTGCCTTATAAAAGCTaGATTTATTCCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: FHTVLTPEITTEILTETTLPYKS*IYSSWP
Trigger: TGGCCAAGAGGAATAAATTCAGCTTTTATAAGGCAG...TGTAGTTTCTGTTAATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR TCA 90 bp CACACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTACAGCAACATGTTGTTaGATAAGAAAAGGTAGCGTT +
Preference number: 4 (lower is better)
Translates to: HTTLFPDTSADSISKIPFTATCC*IRKGSV
Trigger: AACGCTACCTTTTCTTATTCAACAACATGTTGCTGT...AAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp ACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTCTTTTTCTTGAAGGGCCTTaGTCCATTCTTCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: TTLFPDTSADSISKIPFLFLEGP*SILLCL
Trigger: AAGACAAAGAAGAATGGATCAAGGCCCTTCAAGAAA...AAGAAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR TCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAATTTCTTGAAGGGCCTTaGTCCATTCTTCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKFLEGP*SILLCL
Trigger: AAGACAAAGAAGAATGGATCAAGGCCCTTCAAGAAA...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR TCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATGTAGAAACCTCTGAGTaGATGTCATTATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYVETSE*MSLSFA
Trigger: TGCAAAGGATAATGACATTCACTCAGAGGTTTCTAC...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAAACTGCTCAAGTATGTTaGAAGGGAAAAGGCATTGAT +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKTAQVC*KGKGID
Trigger: ATCAATGCCTTTTCCCTTCCAACATACTTGAGCAGT...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp TTCCACACTGTTCTGACTCCTGAAATTACAACAGAGATATTAACAGAAACTACACAATTTCTTCTTGCTTaGCCCGTAAGTATTAGGGAT +
Preference number: 4 (lower is better)
Translates to: FHTVLTPEITTEILTETTQFLLA*PVSIRD
Trigger: ATCCCTAATACTTACGGGCCAAGCAAGAAGAAATTG...TGTAGTTTCTGTTAATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR GCA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATAAGAGTTTTATTGCTTaGATACATGATGACACTGTG +
Preference number: 4 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYKSFIA*IHDDTV
Trigger: CACAGTGTCATCATGTATGCAAGCAATAAAACTCTT...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CCA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAATATAAATCTTCCCATTaGCCCATACATTACCATTGT +
Preference number: 4 (lower is better)
Translates to: INLPIGPYITIVLVTLTKYKSSH*PIHYHC
Trigger: ACAATGGTAATGTATGGGCCAATGGGAAGATTTATA...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS GCA 90 bp GAGGGCACCTGGCCCTTGAAGGCAGCGGTCCCTACACGTCCCAGGTaGGACGCGGGCCTGCTCCAGGGCCGGGGCACCCCGGGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: EGTWPLKAAVPTRPR*DAGLLQGRGTPGGR
Trigger: CCTGCCGCCCGGGGTGCCCCGGCCCTGGAGCAGGCCCGCGTCGCACCTGGGACGTGTAGGGACCGCTGCCTTCAAGGGCCAGGTGCCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000550091.5
CDS TCA 90 bp GCGGCAGGTAGGAGGGGTTGGACTTCCGCCGGATCGCCACCCGCCTaGAGTTGGAGCCGCCCTCGTCGCTCATCCTGCCGGGCTCGACCG +
Preference number: 5 (lower is better)
Translates to: AAGRRGWTSAGSPPA*SWSRPRRSSCRARP
Trigger: CGGTCGAGCCCGGCAGGATGAGCGACGAGGGCGGCTCCAACTTCAGGCGGGTGGCGATCCGGCGGAAGTCCAACCCCTCCTACCTGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS CCA 90 bp TCCCTCTCCTTCCCGGTACGCTCCCTCCCGGCGTCGCGGCGAGTTTaGCTGCGGCGACTCCTGCGGCAGTCGCAGCGTCTCGGTATCTGC +
Preference number: 5 (lower is better)
Translates to: SLSFPVRSLPASRRV*LRRLLRQSQRLGIC
Trigger: GCAGATACCGAGACGCTGCGACTGCCGCAGGAGTCGCCGCAGCCAAACTCGCCGCGACGCCGGGAGGGAGCGTACCGGGAAGGAGAGGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp TCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACCTGTGACAGCTTGGCTGGATGCTCATTaGGACCACCTGGTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: SKVAGCSFGPPGVSPVTAWLDAH*DHLVSH
Trigger: GTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCA...AGCTGTCACAGGTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp TCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACCTGTGACAGCTGTGTGGTTGTGCTGCTaGTGGAGCAAGGTGGAACTA +
Preference number: 5 (lower is better)
Translates to: SKVAGCSFGPPGVSPVTAVWLCC*WSKVEL
Trigger: TAGTTCCACCTTGCTCCACAAGCAGCACAACCACAC...AGCTGTCACAGGTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp CTTTCAGCCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGTGGCTTTGGAGGCACTaGTGGCTTTGGACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LSATSASVPHCLQQSCARWLWRH*WLWTCS
Trigger: GCTGCAAGTCCAAAGCCACAAGTGCCTCCAAAGCCA...CCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGGCTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACGCAGGTCTGCGCTCCTaGGCATTTCATCCACCACAT +
Preference number: 5 (lower is better)
Translates to: GQFETVWQVCAPWHFIHHAGLRS*AFHPPH
Trigger: ATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGC...GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp TGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCAGACACCTAGGCAGGCAGATCGCTaGAGCTCAGGAGTTCGAGAT +
Preference number: 5 (lower is better)
Translates to: CLAQNWPAVPVFSLSQTPRQADR*SSGVRD
Trigger: ATCTCGAACTCCTGAGCTCAAGCGATCTGCCTGCCT...AGGTGTCTGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR CAA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGGCGTCGCGGCGAGTTaGGCTGCGGCGACTCCTGCG +
Preference number: 5 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREGVAAS*AAATPA
Trigger: CGCAGGAGTCGCCGCAGCCAAACTCGCCGCGACGCC...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp GTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAAGTGGGAACTAAAGCGATCTTaGGACAGGTACTGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: VWQVCAPWHFIHHIAQKWELKRS*DRYCCL
Trigger: AAGGCAGCAGTACCTGTCCAAAGATCGCTTTAGTTC...CCACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp CGCTTCCCCTTGCCCCCAAGGGCATCTGTCCCTTCAGACAGATGTGGTTTAGATCTTGTGGCTTTGGACTaGCAGCTGAGTGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: RFPLPPRASVPSDRCGLDLVALD*QLSVLL
Trigger: CAGCAAAACACTCAGCTGCAAGTCCAAAGCCACAAG...ATCTAAACCACATCTGTCTGAAGGGACAGATGCCCTTGGGGGCAAGGGGAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395740.5
CDS-3UTR CAA 90 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACCCATTCTTCTTTGTCTaGCGCAGAACTGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GQFETVWQVCAPWHFIHHPFFFV*RRTGLQ
Trigger: CTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGG...GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACACAAGAGGGTCTTGCTaGGGGATCACACACCAAGCT +
Preference number: 5 (lower is better)
Translates to: GQFETVWQVCAPWHFIHHTRGSC*GITHQA
Trigger: AGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGT...GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp AAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGACAAGAGGGTCTTGCTaGGGGATCACACACCAAGCT +
Preference number: 5 (lower is better)
Translates to: KLCTDLDWVSLKLCGRSATRGSC*GITHQA
Trigger: AGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGT...CGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp TTCATCCACCACATAGCCCAGAAGTGGAATGGTGGCCTGGGCTCTGACGTCCTGTTAGACTGGGTCAGTTaGAAACTGTGTGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: FIHHIAQKWNGGLGSDVLLDWVS*KLCGRS
Trigger: AGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA...CAGGACGTCAGAGCCCAGGCCACCATTCCACTTCTGGGCTATGTGGTGGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS GCA 90 bp GCTAAGAGTGGCAGCTTTCTCCTCCTCACATTCCATCTGGTTTTGTaGTGCCATTACACCGTTGGCCACACAAGTCTGTGCACCCTGAGT +
Preference number: 5 (lower is better)
Translates to: AKSGSFLLLTFHLVL*CHYTVGHTSLCTLS
Trigger: ACTCAGGGTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAGCACAAAACCAGATGGAATGTGAGGAGGAGAAAGCTGCCACTCTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000583694.2
ENST00000682739.1
CDS CCA 90 bp TCAAACTGTCCTCCTTCTCCTGCCCACATCAGTCTCTGGATTCCCTaGTGGAAAGATCCTCAACAGATCCTCTGCCTCCTTCAAAGCGAC +
Preference number: 5 (lower is better)
Translates to: SNCPPSPAHISLWIP*WKDPQQILCLLQSD
Trigger: GTCGCTTTGAAGGAGGCAGAGGATCTGTTGAGGATCTTTCCACCAGGGAATCCAGAGACTGATGTGGGCAGGAGAAGGAGGACAGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682739.1
CDS-3UTR CAA 90 bp CACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGGGGGTTTGGTGTATATaGGACGAAGGTGAATTCTGC +
Preference number: 5 (lower is better)
Translates to: HGLRLGQFETVWQVCAPWGVWCI*DEGEFC
Trigger: GCAGAATTCACCTTCGTCCAATATACACCAAACCCC...CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp CGCTTCCCCTTGCCCCCAAGGGCATCTGTCCCTTCAGACAGATGTGGTTTAGATCTGGGAGAGGAGTTTTaGTTGAGGTGTGGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: RFPLPPRASVPSDRCGLDLGEEF*LRCGCQ
Trigger: TTGACAACCACACCTCAACAAAAACTCCTCTCCCAG...ATCTAAACCACATCTGTCTGAAGGGACAGATGCCCTTGGGGGCAAGGGGAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395740.5
CDS-3UTR CAA 90 bp CAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTGCAGGTCTGCGCTCCTaGGCATTTCATCCACCACAT +
Preference number: 5 (lower is better)
Translates to: QEGLAWGSHTKLSAKVLTAGLRS*AFHPPH
Trigger: ATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGC...AGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS TCA 90 bp TTTTGTGCTGCCATTACACCGTTGGCCACACAAGTCTGTGCACCCTaGGTCTTATCTGTATCATTTCCCTGCCTCTGTGGCAAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: FCAAITPLATQVCAP*VLSVSFPCLCGKCW
Trigger: CCAGCACTTGCCACAGAGGCAGGGAAATGATACAGATAAGACTCAGGGTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAGCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000583694.2
ENST00000682739.1
CDS GCA 90 bp AAGAGTGGCAGCTTTCTCCTCCTCACATTCCATCTGGTTTTGTGCTaGCATTACACCGTTGGCCACACAAGTCTGTGCACCCTGAGTCTT +
Preference number: 5 (lower is better)
Translates to: KSGSFLLLTFHLVLC*HYTVGHTSLCTLSL
Trigger: AAGACTCAGGGTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAGCACAAAACCAGATGGAATGTGAGGAGGAGAAAGCTGCCACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000583694.2
ENST00000682739.1
CDS-3UTR CAA 90 bp CCATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCGTGTGGTTGTGCTGCTaGTGGAGCAAGGTGGAACTA +
Preference number: 5 (lower is better)
Translates to: PYMYSTRGSCLGITHQAFVWLCC*WSKVEL
Trigger: TAGTTCCACCTTGCTCCACAAGCAGCACAACCACAC...GAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp GGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACTTGCAGCTGAGTGTTTaGCTGGCCTGTTCCCATTTA +
Preference number: 5 (lower is better)
Translates to: GQFETVWQVCAPWHFIHHLQLSV*LACSHL
Trigger: TAAATGGGAACAGGCCAGCAAAACACTCAGCTGCAA...GTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp CCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGACTTAGACTTGTGGCTTTGGACTaGCAGCTGAGTGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PLLLQFLTVCSKAVHGLRLVALD*QLSVLL
Trigger: CAGCAAAACACTCAGCTGCAAGTCCAAAGCCACAAG...TCTAAGTCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp CAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTGAGGCACTTGTGGCTTaGGACTTGCAGCTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: QEGLAWGSHTKLSAKVLTEALVA*DLQLSV
Trigger: AACACTCAGCTGCAAGTCCAAAGCCACAAGTGCCTC...AGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp CCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCGAGGCACTTGTGGCTTaGGACTTGCAGCTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: PTNHISTCSTMMPPSCQCEALVA*DLQLSV
Trigger: AACACTCAGCTGCAAGTCCAAAGCCACAAGTGCCTC...GCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp CAGGATGATCATCCAAGGTGGCTGGATGCTCATTTGGACCACCTGGTGTCTCACTTTATGCCTGGGGGTTaGGTGTATATTGGACGAAGG +
Preference number: 5 (lower is better)
Translates to: QDDHPRWLDAHLDHLVSHFMPGG*VYIGRR
Trigger: CCTTCGTCCAATATACACCAAACCCCCAGGCATAAA...GTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCACCTTGGATGATCATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp TCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCACCATTCTTCTTTGTCTaGCGCAGAACTGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SSLSCAELACSSSVLSFPPFFFV*RRTGLQ
Trigger: CTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGG...TGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp GTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGAGCATCGATGGTTTCTaGAAGGGCCTTGATCCATTC +
Preference number: 5 (lower is better)
Translates to: VQHKRVLLGDHTPSFLPRSIDGF*KGLDPF
Trigger: GAATGGATCAAGGCCCTTCAAGAAACCATCGATGCT...CCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS GCA 90 bp CATCTGGTTTTGTGCTGCCATTACACCGTTGGCCACACAAGTCTGTaGACCCTGAGTCTTATCTGTATCATTTCCCTGCCTCTGTGGCAA +
Preference number: 5 (lower is better)
Translates to: HLVLCCHYTVGHTSL*TLSLICIISLPLWQ
Trigger: TTGCCACAGAGGCAGGGAAATGATACAGATAAGACTCAGGGTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAGCACAAAACCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000583694.2
ENST00000682739.1
CDS-3UTR CAA 90 bp AGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCGAACTAAAGCGATCTTaGGACAGGTACTGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: RLGQFETVWQVCAPWHFIELKRS*DRYCCL
Trigger: AAGGCAGCAGTACCTGTCCAAAGATCGCTTTAGTTC...GATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp ATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCGTGTGGTTGTGCTGCTaGTGGAGCAAGGTGGAACTA +
Preference number: 5 (lower is better)
Translates to: MPTLVRTVNLEPTKLNLGVWLCC*WSKVEL
Trigger: TAGTTCCACCTTGCTCCACAAGCAGCACAACCACAC...GCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp GAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCGTTTAACTGCCCACCAACCAGTGTGGTaGTGCTGCTTGTGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: EHRGNANQQPELENRLTAHQPVW*CCLWSK
Trigger: CTTGCTCCACAAGCAGCACAACCACACTGGTTGGTG...GGCAGTTAAACGATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp TCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCCACAGATTTCACCAACCAGTGTGGTaGTGCTGCTTGTGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: SAEQVLACDAAKLSSHRFHQPVW*CCLWSK
Trigger: CTTGCTCCACAAGCAGCACAACCACACTGGTTGGTG...AAATCTGTGGGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp CCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGACTTAGATTTGTTGAGGTGTGGTaGTCAATCCATGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: PLLLQFLTVCSKAVHGLRFVEVW*SIHAFL
Trigger: CAGGAAGGCATGGATTGACAACCACACCTCAACAAA...TCTAAGTCCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493087.5
CDS-3UTR CAA 90 bp AGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCGGAGAGGAGTTTTTGTaGAGGTGTGGTTGTCAATCC +
Preference number: 5 (lower is better)
Translates to: RLGQFETVWQVCAPWHFIGEEFL*RCGCQS
Trigger: GGATTGACAACCACACCTCAACAAAAACTCCTCTCC...GATGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493087.5
CDS-3UTR CAA 90 bp GAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCGTTTAACTGCCGCTGCCATTACACCGTaGGCCACACAAGTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: EHRGNANQQPELENRLTAAAITP*ATQVCA
Trigger: TGCACAGACTTGTGTGGCCAACGGTGTAATGGCAGC...GGCAGTTAAACGATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp CTTTCAGCCACTTCTGCTTCAGTTCCTCACTGTCTGCAGCAAAGCTGTGCACGGCCCATTTTCCCTCTCTaGTACCTTGGTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LSATSASVPHCLQQSCARPIFPL*YLGFCF
Trigger: GAAACAGAAACCAAGGTACAAGAGAGGGAAAATGGG...CCGTGCACAGCTTTGCTGCAGACAGTGAGGAACTGAAGCAGAAGTGGCTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000494977.1
CDS-3UTR CAA 90 bp GTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCCACCACATAGCCCAGAAGTGGCTTTCTGCCAAGGTTTaGACTTCTCCATATACTGAA +
Preference number: 5 (lower is better)
Translates to: VWQVCAPWHFIHHIAQKWLSAKV*TSPYTE
Trigger: TTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAG...CCACTTCTGGGCTATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp ATTCACCATCTCTGCTGGAAACGAGCCTCGGTTTGCTTCTTCCAACAGTTTGCAACAAGAGGGTCTTGCTaGGGGATCACACACCAAGCT +
Preference number: 5 (lower is better)
Translates to: IHHLCWKRASVCFFQQFATRGSC*GITHQA
Trigger: AGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGT...TGCAAACTGTTGGAAGAAGCAAACCGAGGCTCGTTTCCAGCAGAGATGGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp AACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAGCAGGTCTGCGCTCCTaGGCATTTCATCCACCACAT +
Preference number: 5 (lower is better)
Translates to: NHISTCSTMMPPSCQCIEAGLRS*AFHPPH
Trigger: ATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGC...TTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp TCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATGGCTGGATGCTCATTaGGACCACCTGGTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: SINANPGSNCEFRAYQAEWLDAH*DHLVSH
Trigger: GTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCA...TTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAGAGGGCACCTGGCCCTaGAAGGCAGCGGTCCCTACA +
Preference number: 5 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEEGTWP*KAAVPT
Trigger: TGTAGGGACCGCTGCCTTCAAGGGCCAGGTGCCCTC...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS TCA 90 bp GGACTTGCAGCTGAGTGTTTTGCTGGCCTGTTCCCATTTATTCCCTaGGCCTCTTCTTCAGATACATTCTCACCAACCAGTGTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: GLAAECFAGLFPFIP*ASSSDTFSPTSVVV
Trigger: CACAACCACACTGGTTGGTGAGAATGTATCTGAAGAAGAGGCTCAGGGAATAAATGGGAACAGGCCAGCAAAACACTCAGCTGCAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS GCA 90 bp GAGCCTCTTCTTCAGATACATTCTCACCAACCAGTGTGGTTGTGCTaGTTGTGGAGCAAGGTGGAACTAAAGCGATCTTTGGACAGGTAC +
Preference number: 5 (lower is better)
Translates to: EPLLQIHSHQPVWLC*LWSKVELKRSLDRY
Trigger: GTACCTGTCCAAAGATCGCTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCACACTGGTTGGTGAGAATGTATCTGAAGAAGAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS GCA 90 bp GCTTTATGCCTGGGGGTTTGGTGTATATTGGACGAAGGTGAATTCTaGAGGTGTAATGGCTTTGGAGGCACTTGTGGCTTTGGACTTGCA +
Preference number: 5 (lower is better)
Translates to: ALCLGVWCILDEGEF*RCNGFGGTCGFGLA
Trigger: TGCAAGTCCAAAGCCACAAGTGCCTCCAAAGCCATTACACCTGCAGAATTCACCTTCGTCCAATATACACCAAACCCCCAGGCATAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000551984.5
ENST00000583694.2
CDS CCA 90 bp CTTCTTCAGATACATTCTCACCAACCAGTGTGGTTGTGCTGCTTGTaGAGCAAGGTGGAACTAAAGCGATCTTTGGACAGGTACTGCTGC +
Preference number: 5 (lower is better)
Translates to: LLQIHSHQPVWLCCL*SKVELKRSLDRYCC
Trigger: GCAGCAGTACCTGTCCAAAGATCGCTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCACACTGGTTGGTGAGAATGTATCTGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS CCA 90 bp AGTCTGTGCACCCTGAGTCTTATCTGTATCATTTCCCTGCCTCTGTaGCAAGTGCTGGGAGAGGAGTTTTTGTTGAGGTGTGGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: SLCTLSLICIISLPL*QVLGEEFLLRCGCQ
Trigger: TTGACAACCACACCTCAACAAAAACTCCTCTCCCAGCACTTGCCACAGAGGCAGGGAAATGATACAGATAAGACTCAGGGTGCACAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000583694.2
ENST00000682739.1
CDS-3UTR CAA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACGAGGCACTTGTGGCTTaGGACTTGCAGCTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYEALVA*DLQLSV
Trigger: AACACTCAGCTGCAAGTCCAAAGCCACAAGTGCCTC...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp CAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTACATTCCATCTGGTTTaGTGCTGCCATTACACCGTT +
Preference number: 5 (lower is better)
Translates to: QHKRVLLGDHTPSFLPRFTFHLV*CCHYTV
Trigger: AACGGTGTAATGGCAGCACAAAACCAGATGGAATGT...AAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CAA 90 bp GGCCTTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTAGTAGTTTCCCATTCTaGCATTCGTTTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GLDPFFFVLRRTGLQFQCSSFPF*HSFLQL
Trigger: GAGCTGGAGAAACGAATGCAAGAATGGGAAACTACT...ACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp TCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCCACAGATTTCCATTCTTCTTTGTCTaGCGCAGAACTGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SAEQVLACDAAKLSSHRFPFFFV*RRTGLQ
Trigger: CTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGG...AAATCTGTGGGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp TGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACCCATTCTTCTTTGTCTaGCGCAGAACTGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: CLGITHQAFCQGFDFSIYPFFFV*RRTGLQ
Trigger: CTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGG...GTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp CCATACATGTACAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTTGATCCATTCTTCTTaGTCTTGCGCAGAACTGGCC +
Preference number: 5 (lower is better)
Translates to: PYMYSTRGSCLGITHQAFLIHSS*SCAELA
Trigger: GGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA...GAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTGTACATGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp CACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCTTTCTGCCAAGGTTTaGACTTCTCCATATACTGAA +
Preference number: 5 (lower is better)
Translates to: HGLRLGQFETVWQVCAPWLSAKV*TSPYTE
Trigger: TTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAG...CCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp TTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTCCACTCGCTTCCCCTaGCCCCCAAGGGCATCTGTC +
Preference number: 5 (lower is better)
Translates to: LHFIHIVTSLSRIHLGALSTRFP*PPRASV
Trigger: GACAGATGCCCTTGGGGGCAAGGGGAAGCGAGTGGA...AAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395740.5
CDS CCA 90 bp TCTCCTCCTCACATTCCATCTGGTTTTGTGCTGCCATTACACCGTTaGCCACACAAGTCTGTGCACCCTGAGTCTTATCTGTATCATTTC +
Preference number: 5 (lower is better)
Translates to: SPPHIPSGFVLPLHR*PHKSVHPESYLYHF
Trigger: GAAATGATACAGATAAGACTCAGGGTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAGCACAAAACCAGATGGAATGTGAGGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000583694.2
ENST00000682739.1
CDS CCA 90 bp TCCTGTAGCTACTGTCAGAAGCATTTCCATCACAGCTGTCTGTTGTaGGTGATGCAGGAGCTGTGGCAGTTTCATCTCTTTCTCCATTCA +
Preference number: 5 (lower is better)
Translates to: SCSYCQKHFHHSCLL*VMQELWQFHLFLHS
Trigger: TGAATGGAGAAAGAGATGAAACTGCCACAGCTCCTGCATCACCCACAACAGACAGCTGTGATGGAAATGCTTCTGACAGTAGCTACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000583694.2
ENST00000682739.1
CDS-3UTR CAA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGCACCAACCAGTGTGGTaGTGCTGCTTGTGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEHQPVW*CCLWSK
Trigger: CTTGCTCCACAAGCAGCACAACCACACTGGTTGGTG...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp TTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTTGCAGCTGAGTGTTTaGCTGGCCTGTTCCCATTTA +
Preference number: 5 (lower is better)
Translates to: LIHSSLSCAELACSSSVLLQLSV*LACSHL
Trigger: TAAATGGGAACAGGCCAGCAAAACACTCAGCTGCAA...GAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACCTTGTGGCTTTGGACTaGCAGCTGAGTGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYLVALD*QLSVLL
Trigger: CAGCAAAACACTCAGCTGCAAGTCCAAAGCCACAAG...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTATGGCTTTGGAGGCACTaGTGGCTTTGGACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLWLWRH*WLWTCS
Trigger: GCTGCAAGTCCAAAGCCACAAGTGCCTCCAAAGCCA...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTTTATGCCTGGGGGTTaGGTGTATATTGGACGAAGG +
Preference number: 5 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPFMPGG*VYIGRR
Trigger: CCTTCGTCCAATATACACCAAACCCCCAGGCATAAA...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp GGCCTTGATCCATTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTACTGGGTTTTTCTTTaGAGACACAAGAAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GLDPFFFVLRRTGLQFQCYWVFL*RHKKQR
Trigger: CCTCTGCTTCTTGTGTCTCAAAAGAAAAACCCAGTA...ACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTGGAGAGGAGTTTTTGTaGAGGTGTGGTTGTCAATCC +
Preference number: 5 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPGEEFL*RCGCQS
Trigger: GGATTGACAACCACACCTCAACAAAAACTCCTCTCC...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CAA 90 bp TTCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCACATTCCATCTGGTTTaGTGCTGCCATTACACCGTT +
Preference number: 5 (lower is better)
Translates to: FFFVLRRTGLQFQCSLFPTFHLV*CCHYTV
Trigger: AACGGTGTAATGGCAGCACAAAACCAGATGGAATGT...GGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CAA 90 bp CAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTAGTAGTTTCCCATTCTaGCATTCGTTTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: QEGLAWGSHTKLSAKVLTSSFPF*HSFLQL
Trigger: GAGCTGGAGAAACGAATGCAAGAATGGGAAACTACT...AGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp TCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAACTTGTTCTACAGATTTaGAGTCCGCTGTCCACTCGC +
Preference number: 5 (lower is better)
Translates to: SINANPGSNCEFRAYQAELVLQI*SPLSTR
Trigger: GCGAGTGGACAGCGGACTCAAAATCTGTAGAACAAG...TTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395740.5
CDS-3UTR CAA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGGCAGGTCTGCGCTCCTaGGCATTTCATCCACCACAT +
Preference number: 5 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEAGLRS*AFHPPH
Trigger: ATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGC...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp CTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCACACAGTACTCTTCCTTCATACACTaGCTCACTCTCGCTTGCCAC +
Preference number: 5 (lower is better)
Translates to: LVRTVNLEPTKLNLGTQYSSFIH*LTLACH
Trigger: GTGGCAAGCGAGAGTGAGCAAGTGTATGAAGGAAGA...GTACTGTGTGCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR CAA 90 bp TCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCATTTCACTGCTTCTCTTaGCGTTTAGCTGTGACAGCT +
Preference number: 5 (lower is better)
Translates to: SSLSCAELACSSSVLSFPFHCFS*RLAVTA
Trigger: AGCTGTCACAGCTAAACGCAAAGAGAAGCAGTGAAA...TGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS TCA 90 bp GTAGCTACTGTCAGAAGCATTTCCATCACAGCTGTCTGTTGTGGGTaGTGCAGGAGCTGTGGCAGTTTCATCTCTTTCTCCATTCACTAT +
Preference number: 5 (lower is better)
Translates to: VATVRSISITAVCCG*CRSCGSFISFSIHY
Trigger: ATAGTGAATGGAGAAAGAGATGAAACTGCCACAGCTCCTGCATCACCCACAACAGACAGCTGTGATGGAAATGCTTCTGACAGTAGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000583694.2
ENST00000682739.1
CDS TCA 90 bp AGAGTTTTAAGACAACAATCGAATAGGCAGGGTTTTCCCTGCTCATaGGCTAGTCTCATGCTCTACCTTCATCTCATGGTGCTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: RVLRQQSNRQGFPCS*ASLMLYLHLMVLVQ
Trigger: CTGGACCAGCACCATGAGATGAAGGTAGAGCATGAGACTAGCTCATGAGCAGGGAAAACCCTGCCTATTCGATTGTTGTCTTAAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472289.5
ENST00000494275.5
CDS CCA 90 bp TTATTCCCTGAGCCTCTTCTTCAGATACATTCTCACCAACCAGTGTaGTTGTGCTGCTTGTGGAGCAAGGTGGAACTAAAGCGATCTTTG +
Preference number: 5 (lower is better)
Translates to: LFPEPLLQIHSHQPV*LCCLWSKVELKRSL
Trigger: CAAAGATCGCTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCACACTGGTTGGTGAGAATGTATCTGAAGAAGAGGCTCAGGGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS-3UTR CAA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAACACCAACCAGTGTGGTaGTGCTGCTTGTGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREHQPVW*CCLWSK
Trigger: CTTGCTCCACAAGCAGCACAACCACACTGGTTGGTG...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGGAGGCACTTGTGGCTTaGGACTTGCAGCTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: LENRLTASVGDLIHTFQGEALVA*DLQLSV
Trigger: AACACTCAGCTGCAAGTCCAAAGCCACAAGTGCCTC...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTGAGGCACTTGTGGCTTaGGACTTGCAGCTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: RLVLATQVVSSPERSSEIEALVA*DLQLSV
Trigger: AACACTCAGCTGCAAGTCCAAAGCCACAAGTGCCTC...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp TGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACGGGGTTTGGTGTATATaGGACGAAGGTGAATTCTGC +
Preference number: 5 (lower is better)
Translates to: CLGITHQAFCQGFDFSIYGVWCI*DEGEFC
Trigger: GCAGAATTCACCTTCGTCCAATATACACCAAACCCC...GTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp GAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCGTTTAACTGCCTTTATGCCTGGGGGTTaGGTGTATATTGGACGAAGG +
Preference number: 5 (lower is better)
Translates to: EHRGNANQQPELENRLTAFMPGG*VYIGRR
Trigger: CCTTCGTCCAATATACACCAAACCCCCAGGCATAAA...GGCAGTTAAACGATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp TTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATACTGGGTTTTTCTTTaGAGACACAAGAAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LDWVSLKLCGRSALLGISYWVFL*RHKKQR
Trigger: CCTCTGCTTCTTGTGTCTCAAAAGAAAAACCCAGTA...TGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp GAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCGTTTAACTGCCCTGGGAGAGGAGTTTTaGTTGAGGTGTGGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: EHRGNANQQPELENRLTALGEEF*LRCGCQ
Trigger: TTGACAACCACACCTCAACAAAAACTCCTCTCCCAG...GGCAGTTAAACGATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp TACAATTTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCGCTGCCATTACACCGTaGGCCACACAAGTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: YNFHSINANPGSNCEFRAAAITP*ATQVCA
Trigger: TGCACAGACTTGTGTGGCCAACGGTGTAATGGCAGC...GGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CAA 90 bp GTCGGAGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTCCCATTTTCCCTCTCTaGTACCTTGGTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: VGAFPTNHISTCSTMMPPPIFPL*YLGFCF
Trigger: GAAACAGAAACCAAGGTACAAGAGAGGGAAAATGGG...AGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCTCCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
CDS-3UTR CAA 90 bp TTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCTGCGCTCCTTGGCATTTCATCTTCAACCACTGATTaGAACTGGGGAATACGTTCT +
Preference number: 5 (lower is better)
Translates to: LDWVSLKLCGRSALLGISSSTTD*NWGIRS
Trigger: AGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAGA...TGAAATGCCAAGGAGCGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp TGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACTTGATCCATTCTTCTTaGTCTTGCGCAGAACTGGCC +
Preference number: 5 (lower is better)
Translates to: CLGITHQAFCQGFDFSIYLIHSS*SCAELA
Trigger: GGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA...GTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp TCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTGATCCATTCTTCTTaGTCTTGCGCAGAACTGGCC +
Preference number: 5 (lower is better)
Translates to: SINANPGSNCEFRAYQAELIHSS*SCAELA
Trigger: GGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA...TTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp AGCAAAGCTGTGCACGGACTTAGACTGGGTCAGTTTGAAACTGTGTGGCAGGTCCTTTCTGCCAAGGTTTaGACTTCTCCATATACTGAA +
Preference number: 5 (lower is better)
Translates to: SKAVHGLRLGQFETVWQVLSAKV*TSPYTE
Trigger: TTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAG...GACCTGCCACACAGTTTCAAACTGACCCAGTCTAAGTCCGTGCACAGCTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp AATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGTTAGACTGGGTCAGTTaGAAACTGTGTGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: NANPGSNCEFRAYQAEFGLDWVS*KLCGRS
Trigger: AGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA...CCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACTGGCTGGATGCTCATTaGGACCACCTGGTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDWLDAH*DHLVSH
Trigger: GTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCA...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGTGGCTGGATGCTCATTaGGACCACCTGGTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVWLDAH*DHLVSH
Trigger: GTGAGACACCAGGTGGTCCAAATGAGCATCCAGCCA...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp AATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGTGCAATGCCCTCCTAAGGCGATaGGTAGAAGTGTGTGACTAC +
Preference number: 5 (lower is better)
Translates to: NRLTASVGDLIHTFQGCNALLRR*VEVCDY
Trigger: GTAGTCACACACTTCTACCAATCGCCTTAGGAGGGC...ATTGCACCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGGTGTGGTTGTGCTGCTaGTGGAGCAAGGTGGAACTA +
Preference number: 5 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVVWLCC*WSKVEL
Trigger: TAGTTCCACCTTGCTCCACAAGCAGCACAACCACAC...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp TTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTCACCAACCAGTGTGGTaGTGCTGCTTGTGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: LHFIHIVTSLSRIHLGALHQPVW*CCLWSK
Trigger: CTTGCTCCACAAGCAGCACAACCACACTGGTTGGTG...AAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp TTCTTTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTGGCTTTGGAGGCACTaGTGGCTTTGGACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: FFTFHTHCHFIISDPSWGWLWRH*WLWTCS
Trigger: GCTGCAAGTCCAAAGCCACAAGTGCCTCCAAAGCCA...GCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAGCTGCCATTACACCGTaGGCCACACAAGTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEAAITP*ATQVCA
Trigger: TGCACAGACTTGTGTGGCCAACGGTGTAATGGCAGC...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp GAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATCGTTTAACTGCCACATTCCATCTGGTTTaGTGCTGCCATTACACCGTT +
Preference number: 5 (lower is better)
Translates to: EHRGNANQQPELENRLTATFHLV*CCHYTV
Trigger: AACGGTGTAATGGCAGCACAAAACCAGATGGAATGT...GGCAGTTAAACGATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTATCCCTCTCTTGTACCTaGGTTTCTGTTTCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLSLSCT*VSVSAP
Trigger: AGGGGCAGAAACAGAAACCAAGGTACAAGAGAGGGA...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CAA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTCCCTCTCTTGTACCTaGGTTTCTGTTTCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: WQHGGISFKLFQVLHVKESLSCT*VSVSAP
Trigger: AGGGGCAGAAACAGAAACCAAGGTACAAGAGAGGGA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGCCATTCTTCTTTGTCTaGCGCAGAACTGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVPFFFV*RRTGLQ
Trigger: CTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGG...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAACCATTCTTCTTTGTCTaGCGCAGAACTGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREPFFFV*RRTGLQ
Trigger: CTGCAGGCCAGTTCTGCGCAAGACAAAGAAGAATGG...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp TCTTCTTTGTCTTGCGCAGAACTGGCCTGCAGTTCCAGTGTTCTCTCTTTCCCACTTCGTGTCAGTGCATaGAAAGGTTCTTTACATTTC +
Preference number: 5 (lower is better)
Translates to: SSLSCAELACSSSVLSFPLRVSA*KGSLHF
Trigger: GAAATGTAAAGAACCTTTCAATGCACTGACACGAAG...TGGGAAAGAGAGAACACTGGAACTGCAGGCCAGTTCTGCGCAAGACAAAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp TCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCTTTACATTTCATACAAGAGGGTCTTGCTaGGGGATCACACACCAAGCT +
Preference number: 5 (lower is better)
Translates to: STMMPPSCQCIERFFTFHTRGSC*GITHQA
Trigger: AGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGT...ATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTCCCTAGAAGTTTACTaGCTCCGGTTGGTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: WQHGGISFKLFQVLHVKESLEVY*LRLVLA
Trigger: AGCAAGCACCAACCGGAGCAAGTAAACTTCTAGGGA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp CAGCACAAGAGGGTCTTGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTATTTTGTGAAGTTTTaGCTCATTAGTCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: QHKRVLLGDHTPSFLPRFYFVKF*LISLLP
Trigger: AGGCAGGAGACTAATGAGCAAAAACTTCACAAAATA...AAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000551984.5
CDS TCA 90 bp TATGTGCGTATCAAGCAAGGGTTCAGAAGCTTGAATAGAAGTATCTaGGCTAAGAGTGGCAGCTTTCTCCTCCTCACATTCCATCTGGTT +
Preference number: 5 (lower is better)
Translates to: YVRIKQGFRSLNRSI*AKSGSFLLLTFHLV
Trigger: AACCAGATGGAATGTGAGGAGGAGAAAGCTGCCACTCTTAGCTCAGATACTTCTATTCAAGCTTCTGAACCCTTGCTTGATACGCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000583694.2
ENST00000682739.1
CDS GCA 90 bp GGTTTAATTTCCTCCATCCTTGGTTTTGCACTAGGTAAAGCTTTATaGCTGGGGGTTTGGTGTATATTGGACGAAGGTGAATTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GLISSILGFALGKAL*LGVWCILDEGEFCR
Trigger: CCTGCAGAATTCACCTTCGTCCAATATACACCAAACCCCCAGGCATAAAGCTTTACCTAGTGCAAAACCAAGGATGGAGGAAATTAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000493087.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
CDS CCA 90 bp TCCATCCTTGGTTTTGCACTAGGTAAAGCTTTATGCCTGGGGGTTTaGTGTATATTGGACGAAGGTGAATTCTGCAGGTGTAATGGCTTT +
Preference number: 5 (lower is better)
Translates to: SILGFALGKALCLGV*CILDEGEFCRCNGF
Trigger: AAAGCCATTACACCTGCAGAATTCACCTTCGTCCAATATACACCAAACCCCCAGGCATAAAGCTTTACCTAGTGCAAAACCAAGGATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000493087.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
CDS-3UTR CAA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGGAACTAAAGCGATCTTaGGACAGGTACTGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEELKRS*DRYCCL
Trigger: AAGGCAGCAGTACCTGTCCAAAGATCGCTTTAGTTC...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546442.5
CDS-3UTR CAA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTGTGTGGTTGTGCTGCTaGTGGAGCAAGGTGGAACTA +
Preference number: 5 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIVWLCC*WSKVEL
Trigger: TAGTTCCACCTTGCTCCACAAGCAGCACAACCACAC...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp CACACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTCACCAACCAGTGTGGTaGTGCTGCTTGTGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: HTTLFPDTSADSISKIPFHQPVW*CCLWSK
Trigger: CTTGCTCCACAAGCAGCACAACCACACTGGTTGGTG...AAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACACTTGTGGCTTTGGACTaGCAGCTGAGTGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTLVALD*QLSVLL
Trigger: CAGCAAAACACTCAGCTGCAAGTCCAAAGCCACAAG...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGGGGGTTTGGTGTATATaGGACGAAGGTGAATTCTGC +
Preference number: 5 (lower is better)
Translates to: LENRLTASVGDLIHTFQGGVWCI*DEGEFC
Trigger: GCAGAATTCACCTTCGTCCAATATACACCAAACCCC...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
44% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTATTTATGCCTGGGGGTTaGGTGTATATTGGACGAAGG +
Preference number: 5 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLFMPGG*VYIGRR
Trigger: CCTTCGTCCAATATACACCAAACCCCCAGGCATAAA...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp AACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAATACTGGGTTTTTCTTTaGAGACACAAGAAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: NHISTCSTMMPPSCQCIEYWVFL*RHKKQR
Trigger: CCTCTGCTTCTTGTGTCTCAAAAGAAAAACCCAGTA...TTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp AATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGTGCAATGGAGAGGAGTTTTTGTaGAGGTGTGGTTGTCAATCC +
Preference number: 5 (lower is better)
Translates to: NRLTASVGDLIHTFQGCNGEEFL*RCGCQS
Trigger: GGATTGACAACCACACCTCAACAAAAACTCCTCTCC...ATTGCACCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACTCCCTCTCTTGTACCTaGGTTTCTGTTTCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDSLSCT*VSVSAP
Trigger: AGGGGCAGAAACAGAAACCAAGGTACAAGAGAGGGA...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp AGCATTTCCAACAAACCACATATCCACATGCTCGACAATGATGCCTCCTTCGTGTCTTCAACCACTGATTaGAACTGGGGAATACGTTCT +
Preference number: 5 (lower is better)
Translates to: SISNKPHIHMLDNDASFVSSTTD*NWGIRS
Trigger: AGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAGA...CACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTAAGCATCGATGGTTTCTaGAAGGGCCTTGATCCATTC +
Preference number: 5 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLSIDGF*KGLDPF
Trigger: GAATGGATCAAGGCCCTTCAAGAAACCATCGATGCT...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp ATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTACCAAGCTGAATTTGGGCCTTCGTGTCAGTGCATaGAAAGGTTCTTTACATTTC +
Preference number: 5 (lower is better)
Translates to: MPTLVRTVNLEPTKLNLGLRVSA*KGSLHF
Trigger: GAAATGTAAAGAACCTTTCAATGCACTGACACGAAG...GCCCAAATTCAGCTTGGTAGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAACAAGAGGGTCTTGCTaGGGGATCACACACCAAGCT +
Preference number: 5 (lower is better)
Translates to: ILATWRYIFQTVPGPTCETRGSC*GITHQA
Trigger: AGCTTGGTGTGTGATCCCCAAGCAAGACCCTCTTGT...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACGAACTAAAGCGATCTTaGGACAGGTACTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDELKRS*DRYCCL
Trigger: CAGGCAGCAGTACCTGTCCAAAGATCGCTTTAGTTC...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTTAGACTGGGTCAGTTaGAAACTGTGTGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: WQHGGISFKLFQVLHVKELDWVS*KLCGRS
Trigger: AGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAATGCTCCGGTTGGTGCTaGCTACTCAGGTTGTATCTA +
Preference number: 5 (lower is better)
Translates to: ATWRYIFQTVPGPTCERECSGWC*LLRLYL
Trigger: TAGATACAACCTGAGTAGCAAGCACCAACCGGAGCA...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGTTTACTTGCTCCGGTaGGTGCTTGCTACTCAGGTT +
Preference number: 5 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREVYLLR*VLATQV
Trigger: AACCTGAGTAGCAAGCACCAACCGGAGCAAGTAAAC...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp TGCTTGGGGATCACACACCAAGCTTTCTGCCAAGGTTTTGACTTCTCCATATACGCAAAACCTCGTCTCTaGATCCATTCTTCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: CLGITHQAFCQGFDFSIYAKPRL*IHSSLS
Trigger: AGACAAAGAAGAATGGATCAAGAGACGAGGTTTTGC...GTATATGGAGAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494977.1
CDS-3UTR CAA 90 bp AATATCTGCTTAGAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATGAACTAAAGCGATCTTaGGACAGGTACTGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: NICLEHRGNANQQPELENELKRS*DRYCCL
Trigger: AAGGCAGCAGTACCTGTCCAAAGATCGCTTTAGTTC...ATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTCTAAGCAGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAACTTGTGGCTTTGGACTaGCAGCTGAGTGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: ILATWRYIFQTVPGPTCELVALD*QLSVLL
Trigger: CAGCAAAACACTCAGCTGCAAGTCCAAAGCCACAAG...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp TTCCACACTGTTCTGACTCCTGAAATTACAACAGAGATATTAACAGAAACTACATGGCTTTGGAGGCACTaGTGGCTTTGGACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: FHTVLTPEITTEILTETTWLWRH*WLWTCS
Trigger: GCTGCAAGTCCAAAGCCACAAGTGCCTCCAAAGCCA...TGTAGTTTCTGTTAATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAATGGCTTTGGAGGCACTaGTGGCTTTGGACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: INLPIGPYITIVLVTLTKWLWRH*WLWTCS
Trigger: GCTGCAAGTCCAAAGCCACAAGTGCCTCCAAAGCCA...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAATTTGTTGAGGTGTGGTaGTCAATCCATGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREFVEVW*SIHAFL
Trigger: CAGGAAGGCATGGATTGACAACCACACCTCAACAAA...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGGGAGAGGAGTTTTTGTaGAGGTGTGGTTGTCAATCC +
Preference number: 5 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVGEEFL*RCGCQS
Trigger: GGATTGACAACCACACCTCAACAAAAACTCCTCTCC...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACAGGAGAGGAGTTTTTGTaGAGGTGTGGTTGTCAATCC +
Preference number: 5 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTGEEFL*RCGCQS
Trigger: GGATTGACAACCACACCTCAACAAAAACTCCTCTCC...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACACTGGGAGAGGAGTTTTaGTTGAGGTGTGGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTLGEEF*LRCGCQ
Trigger: TTGACAACCACACCTCAACAAAAACTCCTCTCCCAG...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGACATTCCATCTGGTTTaGTGCTGCCATTACACCGTT +
Preference number: 5 (lower is better)
Translates to: WQHGGISFKLFQVLHVKETFHLV*CCHYTV
Trigger: AACGGTGTAATGGCAGCACAAAACCAGATGGAATGT...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTACCCATTTTCCCTCTCTaGTACCTTGGTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLPIFPL*YLGFCF
Trigger: GAAACAGAAACCAAGGTACAAGAGAGGGAAAATGGG...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
CDS-3UTR CAA 90 bp CGGTTGGTGCTTGCTACTCAGGTTGTATCTAGTCCAGAAAGATCATCAGAAATTCCCATTTTCCCTCTCTaGTACCTTGGTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: RLVLATQVVSSPERSSEIPIFPL*YLGFCF
Trigger: GAAACAGAAACCAAGGTACAAGAGAGGGAAAATGGG...AATTTCTGATGATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCACCAACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp TCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCTCTTTTCCCTAAGTAGTTTCCCATTCTaGCATTCGTTTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SYTLSLHYLGSILGLFSLSSFPF*HSFLQL
Trigger: GAGCTGGAGAAACGAATGCAAGAATGGGAAACTACT...TAGGGAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACTTGATCCATTCTTCTTaGTCTTGCGCAGAACTGGCC +
Preference number: 5 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDLIHSS*SCAELA
Trigger: GGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp TCGACAATGATGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCTTTACATTTCATAGCATCGATGGTTTCTaGAAGGGCCTTGATCCATTC +
Preference number: 5 (lower is better)
Translates to: STMMPPSCQCIERFFTFHSIDGF*KGLDPF
Trigger: GAATGGATCAAGGCCCTTCAAGAAACCATCGATGCT...ATGAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAGCATCGATGGTTTCTaGAAGGGCCTTGATCCATTC +
Preference number: 5 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVSIDGF*KGLDPF
Trigger: GAATGGATCAAGGCCCTTCAAGAAACCATCGATGCT...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp TCCGCTGAACAGGTTCTAGCATGTGATGCTGCAAAGTTAAGCTCCCACAGATTTCTTCGTGTCAGTGCATaGAAAGGTTCTTTACATTTC +
Preference number: 5 (lower is better)
Translates to: SAEQVLACDAAKLSSHRFLRVSA*KGSLHF
Trigger: GAAATGTAAAGAACCTTTCAATGCACTGACACGAAG...AAATCTGTGGGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAAGCAGGTCTGCGCTCCTaGGCATTTCATCCACCACAT +
Preference number: 5 (lower is better)
Translates to: INLPIGPYITIVLVTLTKAGLRS*AFHPPH
Trigger: ATGTGGTGGATGAAATGCCAAGGAGCGCAGACCTGC...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp TACAATTTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCTTAGACTGGGTCAGTTaGAAACTGTGTGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: YNFHSINANPGSNCEFRALDWVS*KLCGRS
Trigger: AGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA...GGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACTTAGACTGGGTCAGTTaGAAACTGTGTGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDLDWVS*KLCGRS
Trigger: AGACCTGCCACACAGTTTCAAACTGACCCAGTCTAA...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACGACCCACAGGGAACGTaGGTTTTAATGGGAAAGCAA +
Preference number: 5 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDDPQGT*VLMGKQ
Trigger: TTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTC...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACAATGAGCTTGTGGCTTaGGACTTGCAGCTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDNELVA*DLQLSV
Trigger: AACACTCAGCTGCAAGTCCAAAGCCACAAGCTCATT...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546442.5
CDS-3UTR CAA 90 bp GTTTCTCCAGCTCTGGCAAGAGGAATTTACTATGGAAGGCATTTATTGATGAAAGAACTAAAGCGATCTTaGGACAGGTACTGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: VSPALARGIYYGRHLLMKELKRS*DRYCCL
Trigger: AAGGCAGCAGTACCTGTCCAAAGATCGCTTTAGTTC...TTTCATCAATAAATGCCTTCCATAGTAAATTCCTCTTGCCAGAGCTGGAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp TTCCACACTGTTCTGACTCCTGAAATTACAACAGAGATATTAACAGAAACTACAGTGTGGTTGTGCTGCTaGTGGAGCAAGGTGGAACTA +
Preference number: 5 (lower is better)
Translates to: FHTVLTPEITTEILTETTVWLCC*WSKVEL
Trigger: TAGTTCCACCTTGCTCCACAAGCAGCACAACCACAC...TGTAGTTTCTGTTAATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTTTGCAGCTGAGTGTTTaGCTGGCCTGTTCCCATTTA +
Preference number: 5 (lower is better)
Translates to: ELRPTGNVGFNGKATNDILQLSV*LACSHL
Trigger: TAAATGGGAACAGGCCAGCAAAACACTCAGCTGCAA...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAATTGCAGCTGAGTGTTTaGCTGGCCTGTTCCCATTTA +
Preference number: 5 (lower is better)
Translates to: ILATWRYIFQTVPGPTCELQLSV*LACSHL
Trigger: TAAATGGGAACAGGCCAGCAAAACACTCAGCTGCAA...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp GTTTCTCCAGCTCTGGCAAGAGGAATTTACTATGGAAGGCATTTATTGATGAAATTGCAGCTGAGTGTTTaGCTGGCCTGTTCCCATTTA +
Preference number: 5 (lower is better)
Translates to: VSPALARGIYYGRHLLMKLQLSV*LACSHL
Trigger: TAAATGGGAACAGGCCAGCAAAACACTCAGCTGCAA...TTTCATCAATAAATGCCTTCCATAGTAAATTCCTCTTGCCAGAGCTGGAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTGGGGTTTGGTGTATATaGGACGAAGGTGAATTCTGC +
Preference number: 5 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIGVWCI*DEGEFC
Trigger: GCAGAATTCACCTTCGTCCAATATACACCAAACCCC...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp TTCTTTACATTTCATACACATTGTCACTTCATTATCTCGGATCCATCTTGGGGCGGGGTTTGGTGTATATaGGACGAAGGTGAATTCTGC +
Preference number: 5 (lower is better)
Translates to: FFTFHTHCHFIISDPSWGGVWCI*DEGEFC
Trigger: GCAGAATTCACCTTCGTCCAATATACACCAAACCCC...GCCCCAAGATGGATCCGAGATAATGAAGTGACAATGTGTATGAAATGTAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000551984.5
CDS-3UTR CAA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAATTTATGCCTGGGGGTTaGGTGTATATTGGACGAAGG +
Preference number: 5 (lower is better)
Translates to: ILATWRYIFQTVPGPTCEFMPGG*VYIGRR
Trigger: CCTTCGTCCAATATACACCAAACCCCCAGGCATAAA...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp CTTGAAAATCGTTTAACTGCCAGTGTGGGTGATCTGATTCATACATTTCAGGGGTACTGGGTTTTTCTTTaGAGACACAAGAAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LENRLTASVGDLIHTFQGYWVFL*RHKKQR
Trigger: CCTCTGCTTCTTGTGTCTCAAAAGAAAAACCCAGTA...CCCCTGAAATGTATGAATCAGATCACCCACACTGGCAGTTAAACGATTTTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTTTTGTTGAGGTGTGGTaGTCAATCCATGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: ELRPTGNVGFNGKATNDIFVEVW*SIHAFL
Trigger: CAGGAAGGCATGGATTGACAACCACACCTCAACAAA...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp ATTAGGGATACAGCACCAACATCTAGAGCAACAAGGAACATTTTCTTTCTATGTTCCCTCTCTTGTACCTaGGTTTCTGTTTCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: IRDTAPTSRATRNIFFLCSLSCT*VSVSAP
Trigger: AGGGGCAGAAACAGAAACCAAGGTACAAGAGAGGGA...ACATAGAAAGAAAATGTTCCTTGTTGCTCTAGATGTTGGTGCTGTATCCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp GCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAACCCATTTTCCCTCTCTaGTACCTTGGTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: ATWRYIFQTVPGPTCEREPIFPL*YLGFCF
Trigger: GAAACAGAAACCAAGGTACAAGAGAGGGAAAATGGG...TTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACAGTAGTTTCCCATTCTaGCATTCGTTTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDSSFPF*HSFLQL
Trigger: GAGCTGGAGAAACGAATGCAAGAATGGGAAACTACT...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAGTAGTTTCCCATTCTaGCATTCGTTTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVSSFPF*HSFLQL
Trigger: GAGCTGGAGAAACGAATGCAAGAATGGGAAACTACT...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp TACAATTTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCAGTAGTTTCCCATTCTaGCATTCGTTTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: YNFHSINANPGSNCEFRASSFPF*HSFLQL
Trigger: GAGCTGGAGAAACGAATGCAAGAATGGGAAACTACT...GGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGTCTTCAACCACTGATTaGAACTGGGGAATACGTTCT +
Preference number: 5 (lower is better)
Translates to: WQHGGISFKLFQVLHVKESSTTD*NWGIRS
Trigger: AGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAGA...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAATTGATCCATTCTTCTTaGTCTTGCGCAGAACTGGCC +
Preference number: 5 (lower is better)
Translates to: ILATWRYIFQTVPGPTCELIHSS*SCAELA
Trigger: GGCCAGTTCTGCGCAAGACAAAGAAGAATGGATCAA...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp GAATTAAGACCCACAGGGAACGTTGGTTTTAATGGGAAAGCAACCAATGATATTAGCATCGATGGTTTCTaGAAGGGCCTTGATCCATTC +
Preference number: 5 (lower is better)
Translates to: ELRPTGNVGFNGKATNDISIDGF*KGLDPF
Trigger: GAATGGATCAAGGCCCTTCAAGAAACCATCGATGCT...AATATCATTGGTTGCTTTCCCATTAAAACCAACGTTCCCTGTGGGTCTTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp TTCCACACTGTTCTGACTCCTGAAATTACAACAGAGATATTAACAGAAACTACACTTGTGGCTTTGGACTaGCAGCTGAGTGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: FHTVLTPEITTEILTETTLVALD*QLSVLL
Trigger: CAGCAAAACACTCAGCTGCAAGTCCAAAGCCACAAG...TGTAGTTTCTGTTAATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGTACTGGGTTTTTCTTTaGAGACACAAGAAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVYWVFL*RHKKQR
Trigger: CCTCTGCTTCTTGTGTCTCAAAAGAAAAACCCAGTA...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp CACACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTTTTGTTGAGGTGTGGTaGTCAATCCATGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HTTLFPDTSADSISKIPFFVEVW*SIHAFL
Trigger: CAGGAAGGCATGGATTGACAACCACACCTCAACAAA...AAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGTGTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CAA 90 bp ATTAGGGATACAGCACCAACATCTAGAGCAACAAGGAACATTTTCTTTCTATGTTTTGTTGAGGTGTGGTaGTCAATCCATGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: IRDTAPTSRATRNIFFLCFVEVW*SIHAFL
Trigger: CAGGAAGGCATGGATTGACAACCACACCTCAACAAA...ACATAGAAAGAAAATGTTCCTTGTTGCTCTAGATGTTGGTGCTGTATCCCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp ACTGATTTGAACTGGGGAATACGTTCTGTCATGTTTTTAACCAATTCCATTGCACTGGGAGAGGAGTTTTaGTTGAGGTGTGGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: TDLNWGIRSVMFLTNSIALGEEF*LRCGCQ
Trigger: TTGACAACCACACCTCAACAAAAACTCCTCTCCCAG...TGCAATGGAATTGGTTAAAAACATGACAGAACGTATTCCCCAGTTCAAATCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CAA 90 bp ACCACACTGTTTCCAGATACTTCTGCTGATTCAATCTCTAAAATTCCTTTTCTTTCCCTCTCTTGTACCTaGGTTTCTGTTTCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: TTLFPDTSADSISKIPFLSLSCT*VSVSAP
Trigger: AGGGGCAGAAACAGAAACCAAGGTACAAGAGAGGGA...AAGAAAAGGAATTTTAGAGATTGAATCAGCAGAAGTATCTGGAAACAGTGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395740.5
ENST00000493087.5
CDS-3UTR CAA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACATCTTCAACCACTGATTaGAACTGGGGAATACGTTCT +
Preference number: 5 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTSSTTD*NWGIRS
Trigger: AGAACGTATTCCCCAGTTCAAATCAGTGGTTGAAGA...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACAATAACCTGTATGACTTaGACTGTCCCAGTGACCAAA +
Preference number: 5 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTITCMT*TVPVTK
Trigger: TTTGGTCACTGGGACAGTCAAAGTCATACAGGTTAT...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp GCTCATTCTAACCTGACGGTGACAGAATCAATTGATACACCATTTCTTCAAGACTGCTTGCTACTCAGGTaGTATCTAGTCCAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: AHSNLTVTESIDTPFLQDCLLLR*YLVQKD
Trigger: ATCTTTCTGGACTAGATACAACCTGAGTAGCAAGCA...GTCTTGAAGAAATGGTGTATCAATTGATTCTGTCACCGTCAGGTTAGAATGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp TGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAATAGGAACTGGTaGGCCACAGTTCATATACTA +
Preference number: 5 (lower is better)
Translates to: WQHGGISFKLFQVLHVKEKNRNW*ATVHIL
Trigger: TAGTATATGAACTGTGGCCAACCAGTTCCTATTCTT...CTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp AATATCTGCTTAGAGCATAGGGGAAATGCTAATCAGCAGCCAGAGCTTGAAAATTGTGACTACTGCTTATaGGGTAACAATCGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: NICLEHRGNANQQPELENCDYCL*GNNRCL
Trigger: AAGACAGCGATTGTTACCCAATAAGCAGTAGTCACA...ATTTTCAAGCTCTGGCTGCTGATTAGCATTTCCCCTATGCTCTAAGCAGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAATTTGATAATGAGCTaGTGGCTTTGGACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVNLIMS*WLWTCS
Trigger: GCTGCAAGTCCAAAGCCACAAGCTCATTATCAAATT...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546442.5
CDS-3UTR CAA 90 bp TTCCACACTGTTCTGACTCCTGAAATTACAACAGAGATATTAACAGAAACTACATTGCAGCTGAGTGTTTaGCTGGCCTGTTCCCATTTA +
Preference number: 5 (lower is better)
Translates to: FHTVLTPEITTEILTETTLQLSV*LACSHL
Trigger: TAAATGGGAACAGGCCAGCAAAACACTCAGCTGCAA...TGTAGTTTCTGTTAATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp GGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAAAGAGAAGAAGACACTTCGTGTCAGTGCATaGAAAGGTTCTTTACATTTC +
Preference number: 5 (lower is better)
Translates to: GGISFKLFQVLHVKEKKTLRVSA*KGSLHF
Trigger: GAAATGTAAAGAACCTTTCAATGCACTGACACGAAG...TGTCTTCTTCTCTTTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp TACAATTTTCATTCCATCAATGCCAACCCTGGTTCGAACTGTGAATTTAGAGCCCTTTCTGCCAAGGTTTaGACTTCTCCATATACTGAA +
Preference number: 5 (lower is better)
Translates to: YNFHSINANPGSNCEFRALSAKV*TSPYTE
Trigger: TTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAG...GGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS TCA 90 bp CTTAATGATCAAGAAATCTCACTTACATATCCACATGCTCGACAATaGTGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCTTTACATTTC +
Preference number: 5 (lower is better)
Translates to: LNDQEISLTYPHARQ*CLLRVSALKGSLHF
Trigger: GAAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTAAGTGAGATTTCTTGATCATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683515.1
CDS-3UTR CAA 90 bp ATAAATCTTCCCATTGGCCCATACATTACCATTGTTCTAGTCACACTTACAAAAACATTCCATCTGGTTTaGTGCTGCCATTACACCGTT +
Preference number: 5 (lower is better)
Translates to: INLPIGPYITIVLVTLTKTFHLV*CCHYTV
Trigger: AACGGTGTAATGGCAGCACAAAACCAGATGGAATGT...TTTTGTAAGTGTGACTAGAACAATGGTAATGTATGGGCCAATGGGAAGATTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp TTCCACACTGTTCTGACTCCTGAAATTACAACAGAGATATTAACAGAAACTACACCCATTTTCCCTCTCTaGTACCTTGGTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: FHTVLTPEITTEILTETTPIFPL*YLGFCF
Trigger: GAAACAGAAACCAAGGTACAAGAGAGGGAAAATGGG...TGTAGTTTCTGTTAATATCTCTGTTGTAATTTCAGGAGTCAGAACAGTGTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472289.5
CDS-3UTR CAA 90 bp GATGAAATATTAGAAAAGATTTTATTCACCATCTCTGCTGGAAACGAGCCTCGGCTTCGTGTCAGTGCATaGAAAGGTTCTTTACATTTC +
Preference number: 5 (lower is better)
Translates to: DEILEKILFTISAGNEPRLRVSA*KGSLHF
Trigger: GAAATGTAAAGAACCTTTCAATGCACTGACACGAAG...CCGAGGCTCGTTTCCAGCAGAGATGGTGAATAAAATCTTTTCTAATATTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395740.5
ENST00000493087.5
ENST00000494977.1
ENST00000551984.5
CDS-3UTR CAA 90 bp ATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGAACTTTCTGCCAAGGTTTaGACTTCTCCATATACTGAA +
Preference number: 5 (lower is better)
Translates to: ILATWRYIFQTVPGPTCELSAKV*TSPYTE
Trigger: TTCAGTATATGGAGAAGTCAAAACCTTGGCAGAAAG...TTCACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000546442.5
CDS-3UTR CAA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGTATCACATGTGGATTTaGTTTCATTCCGACAAAGGA +
Preference number: 5 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVYHMWI*FHSDKG
Trigger: TCCTTTGTCGGAATGAAACAAAATCCACATGTGATA...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp CTATTTTGGCAACATGGAGGTATATCTTTCAAACTGTTCCAGGTCCTACATGTGGGTCTCTTGGTTGAATaGTTTAATAAATGGCTAAGG +
Preference number: 5 (lower is better)
Translates to: LFWQHGGISFKLFQVLHVGLLVE*FNKWLR
Trigger: CCTTAGCCATTTATTAAACAATTCAACCAAGAGACC...CACATGTAGGACCTGGAACAGTTTGAAAGATATACCTCCATGTTGCCAAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATCTTCGTGTCAGTGCATaGAAAGGTTCTTTACATTTC +
Preference number: 5 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYLRVSA*KGSLHF
Trigger: GAAATGTAAAGAACCTTTCAATGCACTGACACGAAG...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS-3UTR CAA 90 bp TGTTTCATTCCGACAAAGGAAAAGGCCCATACAGTTATCTTAAGTGTTCATTATTTTCACTGCTTCTCTTaGCGTTTAGCTGAAGAATGT +
Preference number: 5 (lower is better)
Translates to: CFIPTKEKAHTVILSVHYFHCFS*RLAEEC
Trigger: ACATTCTTCAGCTAAACGCAAAGAGAAGCAGTGAAA...ATAATGAACACTTAAGATAACTGTATGGGCCTTTTCCTTTGTCGGAATGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS GCA 72 bp CAGCGGTCCCTACACGTCCCAGGTGCGACGCGGGCCTaGTCCAGGGCCGGGGCACCCCGGGCGGCAGGTAGG +
Preference number: 6 (lower is better)
Translates to: QRSLHVPGATRA*SRAGAPRAAGR
Trigger: CCTACCTGCCGCCCGGGGTGCCCCGGCCCTGGAGCAGGCCCGCGTCGCACCTGGGACGTGTAGGGACCGCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS GCA 72 bp TGGCCCTTGAAGGCAGCGGTCCCTACACGTCCCAGGTaGGACGCGGGCCTGCTCCAGGGCCGGGGCACCCCG +
Preference number: 6 (lower is better)
Translates to: WPLKAAVPTRPR*DAGLLQGRGTP
Trigger: CGGGGTGCCCCGGCCCTGGAGCAGGCCCGCGTCGCACCTGGGACGTGTAGGGACCGCTGCCTTCAAGGGCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000550091.5
CDS GCA 72 bp CGGTACGCTCCCTCCCGGCGTCGCGGCGAGTTTGGCTaGGGCGACTCCTGCGGCAGTCGCAGCGTCTCGGTA +
Preference number: 6 (lower is better)
Translates to: RYAPSRRRGEFG*GDSCGSRSVSV
Trigger: TACCGAGACGCTGCGACTGCCGCAGGAGTCGCCGCAGCCAAACTCGCCGCGACGCCGGGAGGGAGCGTACCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS GCA 72 bp GCCCAGGTTCGGCGCGACTCCGGGGGCGCCCTCTACTaGGGCGTCTCCTCAGCGAGTGCCTCCTCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: AQVRRDSGGALY*GVSSASASSPS
Trigger: AGAGGGAGAGGAGGCACTCGCTGAGGAGACGCCGCAGTAGAGGGCGCCCCCGGAGTCGCGCCGAACCTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS CCA 72 bp TTCCCGGTACGCTCCCTCCCGGCGTCGCGGCGAGTTTaGCTGCGGCGACTCCTGCGGCAGTCGCAGCGTCTC +
Preference number: 6 (lower is better)
Translates to: FPVRSLPASRRV*LRRLLRQSQRL
Trigger: GAGACGCTGCGACTGCCGCAGGAGTCGCCGCAGCCAAACTCGCCGCGACGCCGGGAGGGAGCGTACCGGGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS CAA 72 bp CTTCCCGGTACGCTCCCTCCCGGCGTCGCGGCGAGTTaGGCTGCGGCGACTCCTGCGGCAGTCGCAGCGTCT +
Preference number: 6 (lower is better)
Translates to: LPGTLPPGVAAS*AAATPAAVAAS
Trigger: AGACGCTGCGACTGCCGCAGGAGTCGCCGCAGCCAAACTCGCCGCGACGCCGGGAGGGAGCGTACCGGGAAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS CAA 90 bp CTCCCTCTCCTTCCCGGTACGCTCCCTCCCGGCGTCGCGGCGAGTTaGGCTGCGGCGACTCCTGCGGCAGTCGCAGCGTCTCGGTATCTG +
Preference number: 6 (lower is better)
Translates to: LPLLPGTLPPGVAAS*AAATPAAVAASRYL
Trigger: CAGATACCGAGACGCTGCGACTGCCGCAGGAGTCGCCGCAGCCAAACTCGCCGCGACGCCGGGAGGGAGCGTACCGGGAAGGAGAGGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS TCA 72 bp AGGAGGGGTTGGACTTCCGCCGGATCGCCACCCGCCTaGAGTTGGAGCCGCCCTCGTCGCTCATCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: RRGWTSAGSPPA*SWSRPRRSSCR
Trigger: CCGGCAGGATGAGCGACGAGGGCGGCTCCAACTTCAGGCGGGTGGCGATCCGGCGGAAGTCCAACCCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534526.7
CDS GCA 72 bp CTGCCCCTCTTTCTTCTAGGGGGAGCACTGGGCCTATaGCTGGAGTCCTGTAGCTACTGTCAGAAGCATTTC +
Preference number: 6 (lower is better)
Translates to: LPLFLLGGALGL*LESCSYCQKHF
Trigger: GAAATGCTTCTGACAGTAGCTACAGGACTCCAGGCATAGGCCCAGTGCTCCCCCTAGAAGAAAGAGGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000583694.2
ENST00000682739.1
CDS CAA 72 bp TGCTGCTTGTGGAGCAAGGTGGAACTAAAGCGATCTTaGGACAGGTACTGCTGCCTGTGGCTCCTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: CCLWSKVELKRS*DRYCCLWLLRA
Trigger: TGCCCTCAGGAGCCACAGGCAGCAGTACCTGTCCAAAGATCGCTTTAGTTCCACCTTGCTCCACAAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534526.7
ENST00000550091.5
CDS GCA 72 bp CATGAGCTAGTCTCATGCTCTACCTTCATCTCATGGTaGTGGTCCAGCTGCTCCAGTTCCAGAGGGCTTTCC +
Preference number: 6 (lower is better)
Translates to: HELVSCSTFISW*WSSCSSSRGLS
Trigger: GGAAAGCCCTCTGGAACTGGAGCAGCTGGACCAGCACCATGAGATGAAGGTAGAGCATGAGACTAGCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472289.5
ENST00000494275.5
CDS CCA 72 bp GCTCATGAGCTAGTCTCATGCTCTACCTTCATCTCATaGTGCTGGTCCAGCTGCTCCAGTTCCAGAGGGCTT +
Preference number: 6 (lower is better)
Translates to: AHELVSCSTFIS*CWSSCSSSRGL
Trigger: AAGCCCTCTGGAACTGGAGCAGCTGGACCAGCACCATGAGATGAAGGTAGAGCATGAGACTAGCTCATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472289.5
ENST00000494275.5
CDS TCA 72 bp AAAATCTCACTCCTGGCTGTAAAGCTTCAGGGAGGCTaGAGATTACACAGGATCTGCCAGGAGCTCAGACCA +
Preference number: 6 (lower is better)
Translates to: KISLLAVKLQGG*RLHRICQELRP
Trigger: TGGTCTGAGCTCCTGGCAGATCCTGTGTAATCTTCAGCCTCCCTGAAGCTTTACAGCCAGGAGTGAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525053.6
CDS GCA 72 bp TTGTGCTGCCATTACACCGTTGGCCACACAAGTCTGTaGACCCTGAGTCTTATCTGTATCATTTCCCTGCCT +
Preference number: 6 (lower is better)
Translates to: LCCHYTVGHTSL*TLSLICIISLP
Trigger: AGGCAGGGAAATGATACAGATAAGACTCAGGGTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000583694.2
ENST00000682739.1
CDS CCA 72 bp CACATTCCATCTGGTTTTGTGCTGCCATTACACCGTTaGCCACACAAGTCTGTGCACCCTGAGTCTTATCTG +
Preference number: 6 (lower is better)
Translates to: HIPSGFVLPLHR*PHKSVHPESYL
Trigger: CAGATAAGACTCAGGGTGCACAGACTTGTGTGGCCAACGGTGTAATGGCAGCACAAAACCAGATGGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000583694.2
ENST00000682739.1
CDS CAA 72 bp CTCATGCTCACTGGCCTAGATCTTGTGGCTTTGGACTaGCAGCTGAGTGTTTTGCTGGCCTGTTCCCATTTA +
Preference number: 6 (lower is better)
Translates to: LMLTGLDLVALD*QLSVLLACSHL
Trigger: TAAATGGGAACAGGCCAGCAAAACACTCAGCTGCAAGTCCAAAGCCACAAGATCTAGGCCAGTGAGCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497153.5
ENST00000682739.1
CDS CAA 90 bp CCTCTTCTTCAGATACATTCTCACCAACCAGTGTGGTTGTGCTGCTaGTGGAGCAAGGTGGAACTAAAGCGATCTTTGGACAGGTACTGC +
Preference number: 6 (lower is better)
Translates to: PLLQIHSHQPVWLCC*WSKVELKRSLDRYC
Trigger: GCAGTACCTGTCCAAAGATCGCTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCACACTGGTTGGTGAGAATGTATCTGAAGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS CAA 90 bp TTCCCTGAGCCTCTTCTTCAGATACATTCTCACCAACCAGTGTGGTaGTGCTGCTTGTGGAGCAAGGTGGAACTAAAGCGATCTTTGGAC +
Preference number: 6 (lower is better)
Translates to: FPEPLLQIHSHQPVW*CCLWSKVELKRSLD
Trigger: GTCCAAAGATCGCTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCACACTGGTTGGTGAGAATGTATCTGAAGAAGAGGCTCAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS CAA 90 bp ATGGCTTTGGAGGCACTTGTGGCTTTGGACTTGCAGCTGAGTGTTTaGCTGGCCTGTTCCCATTTATTCCCTGAGCCTCTTCTTCAGATA +
Preference number: 6 (lower is better)
Translates to: MALEALVALDLQLSV*LACSHLFPEPLLQI
Trigger: TATCTGAAGAAGAGGCTCAGGGAATAAATGGGAACAGGCCAGCAAAACACTCAGCTGCAAGTCCAAAGCCACAAGTGCCTCCAAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000551984.5
ENST00000583694.2
CDS CAA 90 bp CTCACTGGCCTAGATCTTGTGGCTTTGGACTTGCAGCTGAGTGTTTaGCTGGCCTGTTCCCATTTATTCCCTGAGCCTCTTCTTCAGATA +
Preference number: 6 (lower is better)
Translates to: LTGLDLVALDLQLSV*LACSHLFPEPLLQI
Trigger: TATCTGAAGAAGAGGCTCAGGGAATAAATGGGAACAGGCCAGCAAAACACTCAGCTGCAAGTCCAAAGCCACAAGATCTAGGCCAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497153.5
ENST00000682739.1
CDS GCA 72 bp CTGGGGGTTTGGTGTATATTGGACGAAGGTGAATTCTaGAGGTGTAATGGCTTTGGAGGCACTTGTGGCTTT +
Preference number: 6 (lower is better)
Translates to: LGVWCILDEGEF*RCNGFGGTCGF
Trigger: AAAGCCACAAGTGCCTCCAAAGCCATTACACCTGCAGAATTCACCTTCGTCCAATATACACCAAACCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000551984.5
ENST00000583694.2
CDS CCA 72 bp ATACATTCTCACCAACCAGTGTGGTTGTGCTGCTTGTaGAGCAAGGTGGAACTAAAGCGATCTTTGGACAGG +
Preference number: 6 (lower is better)
Translates to: IHSHQPVWLCCL*SKVELKRSLDR
Trigger: CCTGTCCAAAGATCGCTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCACACTGGTTGGTGAGAATGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS CCA 72 bp GAGCCTCTTCTTCAGATACATTCTCACCAACCAGTGTaGTTGTGCTGCTTGTGGAGCAAGGTGGAACTAAAG +
Preference number: 6 (lower is better)
Translates to: EPLLQIHSHQPV*LCCLWSKVELK
Trigger: CTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCACACTGGTTGGTGAGAATGTATCTGAAGAAGAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS CAA 72 bp CAGATACATTCTCACCAACCAGTGTGGTTGTGCTGCTaGTGGAGCAAGGTGGAACTAAAGCGATCTTTGGAC +
Preference number: 6 (lower is better)
Translates to: QIHSHQPVWLCC*WSKVELKRSLD
Trigger: GTCCAAAGATCGCTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCACACTGGTTGGTGAGAATGTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS CAA 72 bp CCTCTTCTTCAGATACATTCTCACCAACCAGTGTGGTaGTGCTGCTTGTGGAGCAAGGTGGAACTAAAGCGA +
Preference number: 6 (lower is better)
Translates to: PLLQIHSHQPVW*CCLWSKVELKR
Trigger: TCGCTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCACACTGGTTGGTGAGAATGTATCTGAAGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS CAA 90 bp GGTTTTGCACTAGGTAAAGCTTTATGCCTGGGGGTTTGGTGTATATaGGACGAAGGTGAATTCTGCAGGTGTAATGGCTTTGGAGGCACT +
Preference number: 6 (lower is better)
Translates to: GFALGKALCLGVWCI*DEGEFCRCNGFGGT
Trigger: AGTGCCTCCAAAGCCATTACACCTGCAGAATTCACCTTCGTCCAATATACACCAAACCCCCAGGCATAAAGCTTTACCTAGTGCAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000493087.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
CDS CAA 90 bp TTGCTCATTAGTCTCCTTGTGGCTTTGGACTTGCAGCTGAGTGTTTaGCTGGCCTGTTCCCATTTATTCCCTGAGCCTCTTCTTCAGATA +
Preference number: 6 (lower is better)
Translates to: LLISLLVALDLQLSV*LACSHLFPEPLLQI
Trigger: TATCTGAAGAAGAGGCTCAGGGAATAAATGGGAACAGGCCAGCAAAACACTCAGCTGCAAGTCCAAAGCCACAAGGAGACTAATGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683182.1
CDS TCA 72 bp GCTGAGTGTTTTGCTGGCCTGTTCCCATTTATTCCCTaGGCCTCTTCTTCAGATACATTCTCACCAACCAGT +
Preference number: 6 (lower is better)
Translates to: AECFAGLFPFIP*ASSSDTFSPTS
Trigger: ACTGGTTGGTGAGAATGTATCTGAAGAAGAGGCTCAGGGAATAAATGGGAACAGGCCAGCAAAACACTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS GCA 72 bp CTTCAGATACATTCTCACCAACCAGTGTGGTTGTGCTaGTTGTGGAGCAAGGTGGAACTAAAGCGATCTTTG +
Preference number: 6 (lower is better)
Translates to: LQIHSHQPVWLC*LWSKVELKRSL
Trigger: CAAAGATCGCTTTAGTTCCACCTTGCTCCACAAGCAGCACAACCACACTGGTTGGTGAGAATGTATCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS GCA 72 bp TCCTCCATCCTTGGTTTTGCACTAGGTAAAGCTTTATaGCTGGGGGTTTGGTGTATATTGGACGAAGGTGAA +
Preference number: 6 (lower is better)
Translates to: SSILGFALGKAL*LGVWCILDEGE
Trigger: TTCACCTTCGTCCAATATACACCAAACCCCCAGGCATAAAGCTTTACCTAGTGCAAAACCAAGGATGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000493087.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
CDS TCA 72 bp ATCAAGCAAGGGTTCAGAAGCTTGAATAGAAGTATCTaGGCTAAGAGTGGCAGCTTTCTCCTCCTCACATTC +
Preference number: 6 (lower is better)
Translates to: IKQGFRSLNRSI*AKSGSFLLLTF
Trigger: GAATGTGAGGAGGAGAAAGCTGCCACTCTTAGCTCAGATACTTCTATTCAAGCTTCTGAACCCTTGCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000493087.5
ENST00000494275.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000546442.5
ENST00000550091.5
ENST00000583694.2
ENST00000682739.1
CDS GCA 72 bp AATGAGCATCAGATGAATAGGTCTTCAGTTGAGATTTaGCCCCTTGAGGAGGACAACTTTGGCCTGGATAAT +
Preference number: 6 (lower is better)
Translates to: NEHQMNRSSVEI*PLEEDNFGLDN
Trigger: ATTATCCAGGCCAAAGTTGTCCTCCTCAAGGGGGCAAATCTCAACTGAAGACCTATTCATCTGATGCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682739.1
CDS CAA 72 bp TGCTGCTTGTGGAGCAAGGTGGAACTAAAGCGATCTTaGGACAGGTACTGCTGCCTTATAAAAGCTGAATTT +
Preference number: 6 (lower is better)
Translates to: CCLWSKVELKRS*DRYCCLIKAEF
Trigger: AAATTCAGCTTTTATAAGGCAGCAGTACCTGTCCAAAGATCGCTTTAGTTCCACCTTGCTCCACAAGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000395740.5
ENST00000472289.5
ENST00000473513.5
ENST00000493087.5
ENST00000494275.5
ENST00000497153.5
ENST00000546442.5
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
ENST00000683182.1
CDS CAA 72 bp CTAGGTAAAGCTTTATGCCTGGGGGTTTGGTGTATATaGGACGAAGGTGAATTCTGCAGGTGTAATGGCTTT +
Preference number: 6 (lower is better)
Translates to: LGKALCLGVWCI*DEGEFCRCNGF
Trigger: AAAGCCATTACACCTGCAGAATTCACCTTCGTCCAATATACACCAAACCCCCAGGCATAAAGCTTTACCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000395740.5
ENST00000427716.7
ENST00000472289.5
ENST00000473513.5
ENST00000479023.5
ENST00000493087.5
ENST00000525053.6
ENST00000531134.7
ENST00000534526.7
ENST00000551984.5
ENST00000583694.2
ENST00000682739.1
CDS CAA 72 bp CTTCAGTTGAGATTTGCCCCCTTGAGGAGGACAACTTaGGCCTGGATAATTTCCCAAGTAGTCTTTAGAGAT +
Preference number: 6 (lower is better)
Translates to: LQLRFAPLRRTT*AWIISQVVFRD
Trigger: ATCTCTAAAGACTACTTGGGAAATTATCCAGGCCAAAGTTGTCCTCCTCAAGGGGGCAAATCTCAACTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682739.1
CDS CAA 72 bp AAGTTTTTGCTCATTAGTCTCCTTGTGGCTTTGGACTaGCAGCTGAGTGTTTTGCTGGCCTGTTCCCATTTA +
Preference number: 6 (lower is better)
Translates to: KFLLISLLVALD*QLSVLLACSHL
Trigger: TAAATGGGAACAGGCCAGCAAAACACTCAGCTGCAAGTCCAAAGCCACAAGGAGACTAATGAGCAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683182.1
CDS TCA 72 bp CAAGAAATCTCACTTACATATCCACATGCTCGACAATaGTGCCTCCTTCGTGTCAGTGCATTGAAAGGTTCT +
Preference number: 6 (lower is better)
Translates to: QEISLTYPHARQ*CLLRVSALKGS
Trigger: AGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGATATGTAAGTGAGATTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683515.1
CDS CCA 72 bp TTGAGATTTGCCCCCTTGAGGAGGACAACTTTGGCCTaGATAATTTCCCAAGTAGTCTTTAGAGATTTGAAT +
Preference number: 6 (lower is better)
Translates to: LRFAPLRRTTLA*IISQVVFRDLN
Trigger: ATTCAAATCTCTAAAGACTACTTGGGAAATTATCCAGGCCAAAGTTGTCCTCCTCAAGGGGGCAAATCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682739.1
CDS CAA 90 bp TATGGCTGTAGACTGTCTTTTTCATGGTTGCTTCCCTTTGCTCTCTaGTTCAATCTAAGTTTTGCACCGCTTCATGCTCATCTCACTTAT +
Preference number: 6 (lower is better)
Translates to: YGCRLSFSWLLPFAL*FNLSFAPLHAHLTY
Trigger: ATAAGTGAGATGAGCATGAAGCGGTGCAAAACTTAGATTGAACAAGAGAGCAAAGGGAAGCAACCATGAAAAAGACAGTCTACAGCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479023.5
CDS TCA 72 bp TTTAGTGATCTCATCTCTTTTATAAACTCAGTTAGCTaGCAGTTGGCTCATGCTCACTGGCCTAGATCTTGT +
Preference number: 6 (lower is better)
Translates to: FSDLISFINSVS*QLAHAHWPRSC
Trigger: ACAAGATCTAGGCCAGTGAGCATGAGCCAACTGTCAGCTAACTGAGTTTATAAAAGAGATGAGATCACTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497153.5
ENST00000682739.1
CDS CAA 90 bp ATTAACCTATTTCCTGCTTCTGGAGCAAGGATTTGGATCCATAATTaGTTGGTAGAAACTATAGGCATTCTGTATTTAGACACTAGACAC +
Preference number: 6 (lower is better)
Translates to: INLFPASGARIWIHN*LVETIGILYLDTRH
Trigger: GTGTCTAGTGTCTAAATACAGAATGCCTATAGTTTCTACCAACAAATTATGGATCCAAATCCTTGCTCCAGAAGCAGGAAATAGGTTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531134.7
CDS CAA 90 bp GAGCATTTAGGTTCACAGCAGACTCTTTCTTCAAATCACTATAATTaGATAATGAGCTTGTTTCATCCTCACAATAATTCCAAAGACAGG +
Preference number: 6 (lower is better)
Translates to: EHLGSQQTLSSNHYN*IMSLFHPHNNSKDR
Trigger: CCTGTCTTTGGAATTATTGTGAGGATGAAACAAGCTCATTATCAAATTATAGTGATTTGAAGAAAGAGTCTGCTGTGAACCTAAATGCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682739.1
CDS CAA 72 bp GGTTCACAGCAGACTCTTTCTTCAAATCACTATAATTaGATAATGAGCTTGTTTCATCCTCACAATAATTCC +
Preference number: 6 (lower is better)
Translates to: GSQQTLSSNHYN*IMSLFHPHNNS
Trigger: GGAATTATTGTGAGGATGAAACAAGCTCATTATCAAATTATAGTGATTTGAAGAAAGAGTCTGCTGTGAACC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682739.1