RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000127084

Ensembl transcript IDs: ENST00000337352.10, ENST00000375482.8, ENST00000416701.6, ENST00000467786.1, ENST00000468206.6, ENST00000488407.1, ENST00000494669.2

Found 950 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGCTCACGGAGCAGCTaGGCCCATAGGGACCTGAAGCTGCAGGGCCCCCGGGCTGTCCTG +
Preference number: 1 (lower is better)
Translates to: CGGVQGSGRLSSRSS*AHRDLKLQGPRAVL
Trigger: CAGGACAGCCCGGGGGCCCTGCAGCTTCAGGTCCCTATGGGCGCAGCTGCTCCGTGAGCTGAGTCTCCCACTGCCCTGCACACCACCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp GGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTaGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGG +
Preference number: 1 (lower is better)
Translates to: GWAEAGWTTLQTSRM*LSLAVPMLPLSAFR
Trigger: CCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR GCA 90 bp AATGGTTCCCAAGCCTTGGCCCTGGCTGGTCCCGAGAAGCCAGCGTaGACACACGGGATCTTCCGAGTGTGTTCCCAGCCTGGGGGCCCC +
Preference number: 1 (lower is better)
Translates to: NGSQALALAGPEKPA*THGIFRVCSQPGGP
Trigger: GGGGCCCCCAGGCTGGGAACACACTCGGAAGATCCCGTGTGTGCACGCTGGCTTCTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 90 bp AGCTCTGCGGAGGAGGCGCTCAGGTACCAGGACTGCTTGGCCCACTaGAGCTTCCACACATGCCCCGAGTCCAGCCTCTCCTCAGGGTCC +
Preference number: 1 (lower is better)
Translates to: SSAEEALRYQDCLAH*SFHTCPESSLSSGS
Trigger: GGACCCTGAGGAGAGGCTGGACTCGGGGCATGTGTGGAAGCTGCAGTGGGCCAAGCAGTCCTGGTACCTGAGCGCCTCCTCCGCAGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 90 bp CACTGCTGCTGCAGCTCTGCGGAGGAGGCGCTCAGGTACCAGGACTaGTTGGCCCACTGCAGCTTCCACACATGCCCCGAGTCCAGCCTC +
Preference number: 1 (lower is better)
Translates to: HCCCSSAEEALRYQD*LAHCSFHTCPESSL
Trigger: GAGGCTGGACTCGGGGCATGTGTGGAAGCTGCAGTGGGCCAAGCAGTCCTGGTACCTGAGCGCCTCCTCCGCAGAGCTGCAGCAGCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp AGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTaGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCA +
Preference number: 1 (lower is better)
Translates to: RRGGPRCRPAGCGCP*QCPCCLFLPSGPAS
Trigger: TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR CCA 90 bp GCTGCTGCAGCTCTGCGGAGGAGGCGCTCAGGTACCAGGACTGCTTaGCCCACTGCAGCTTCCACACATGCCCCGAGTCCAGCCTCTCCT +
Preference number: 1 (lower is better)
Translates to: AAAALRRRRSGTRTA*PTAASTHAPSPASP
Trigger: AGGAGAGGCTGGACTCGGGGCATGTGTGGAAGCTGCAGTGGGCCAAGCAGTCCTGGTACCTGAGCGCCTCCTCCGCAGAGCTGCAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp GGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTaGTGTGCAGGGCAGTGGGAGACTCAGCTCACGGAGCAGCTGCGC +
Preference number: 1 (lower is better)
Translates to: GASNTTSQDSTGPMW*CAGQWETQLTEQLR
Trigger: GCGCAGCTGCTCCGTGAGCTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 90 bp GGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGCAGTaGCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACAC +
Preference number: 1 (lower is better)
Translates to: GGPRCRPAGCGCPWQ*PCCLFLPSGPASPH
Trigger: GTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR GCA 90 bp GCCGTGTCCCCATGGGCAGCAGTGCTTAGGGTTTCCAGCCACTGCTaGTGCAGCTCTGCGGAGGAGGCGCTCAGGTACCAGGACTGCTTG +
Preference number: 1 (lower is better)
Translates to: AVSPWAAVLRVSSHC*CSSAEEALRYQDCL
Trigger: CAAGCAGTCCTGGTACCTGAGCGCCTCCTCCGCAGAGCTGCAGCAGCAGTGGCTGGAAACCCTAAGCACTGCTGCCCATGGGGACACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp GCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATaGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTG +
Preference number: 1 (lower is better)
Translates to: ALGCWPTLSSPGRSS*GLQHHLPGQHRSNV
Trigger: CACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGCCCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR GCA 90 bp GCGCTCAGGTACCAGGACTGCTTGGCCCACTGCAGCTTCCACACATaGCCCGAGTCCAGCCTCTCCTCAGGGTCCGGCACACTCAGTTTG +
Preference number: 1 (lower is better)
Translates to: ALRYQDCLAHCSFHT*PESSLSSGSGTLSL
Trigger: CAAACTGAGTGTGCCGGACCCTGAGGAGAGGCTGGACTCGGGGCATGTGTGGAAGCTGCAGTGGGCCAAGCAGTCCTGGTACCTGAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp CATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTaGTGGTGTGCAGGGCAGTGGGAGACTCAGCTCACGGAGCAGCTG +
Preference number: 1 (lower is better)
Translates to: HGASNTTSQDSTGPM*WCAGQWETQLTEQL
Trigger: CAGCTGCTCCGTGAGCTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 90 bp CCCCCTTCGAGGCCAGAGTCCACCTTACAGGGCCCTGGAGGCCCGTaGCCCAAGGACCTGGGGCTCTCAGAACACACCTCGGTATTTAAA +
Preference number: 1 (lower is better)
Translates to: PPSRPESTLQGPGGP*PKDLGLSEHTSVFK
Trigger: TTTAAATACCGAGGTGTGTTCTGAGAGCCCCAGGTCCTTGGGGCACGGGCCTCCAGGGCCCTGTAAGGTGGACTCTGGCCTCGAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTaGAGGGCAGTGGGAGACTCAGCTCACGGAGCAGCTGCGCCCATA +
Preference number: 1 (lower is better)
Translates to: LQHHLPGQHRSNVVV*RAVGDSAHGAAAPI
Trigger: TATGGGCGCAGCTGCTCCGTGAGCTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp CTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATaGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACAC +
Preference number: 1 (lower is better)
Translates to: LPLSAFRASITTRPI*MMVTLAVGPCSGPH
Trigger: GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR TCA 90 bp CTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATaGTGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACTGCT +
Preference number: 1 (lower is better)
Translates to: LFLPSGPASPHGPYG*WLLWQSAPALGHTA
Trigger: AGCAGTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR TCA 90 bp GAGAAGGGCAGTATCTCCCCTCAGGTGGGCCTCAAGGCCTGGACTTaGGGGCAGCTTCAATCCATGCCCTCCAACCAGGTGACCAGGAGT +
Preference number: 1 (lower is better)
Translates to: EKGSISPQVGLKAWT*GQLQSMPSNQVTRS
Trigger: ACTCCTGGTCACCTGGTTGGAGGGCATGGATTGAAGCTGCCCTCAAGTCCAGGCCTTGAGGCCCACCTGAGGGGAGATACTGCCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp CCCTCTGTCATGTCACTGTTGGAGCTACTGTCCACCATTTGGACGTaGCTTAGACACCCCCTGCCAGAGCTGGACCCCTCAGACCTGGGC +
Preference number: 1 (lower is better)
Translates to: PSVMSLLELLSTIWT*LRHPLPELDPSDLG
Trigger: GCCCAGGTCTGAGGGGTCCAGCTCTGGCAGGGGGTGTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGACAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp GGCCCTCCCTCTGTCATGTCACTGTTGGAGCTACTGTCCACCATTTaGACGTGGCTTAGACACCCCCTGCCAGAGCTGGACCCCTCAGAC +
Preference number: 1 (lower is better)
Translates to: GPPSVMSLLELLSTI*TWLRHPLPELDPSD
Trigger: GTCTGAGGGGTCCAGCTCTGGCAGGGGGTGTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGACAGAGGGAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp CATCTAACTCCTGGATGCAAATGGTTCCCAAGCCTTGGCCCTGGCTaGTCCCGAGAAGCCAGCGTGCACACACGGGATCTTCCGAGTGTG +
Preference number: 1 (lower is better)
Translates to: HLTPGCKWFPSLGPG*SREASVHTRDLPSV
Trigger: CACACTCGGAAGATCCCGTGTGTGCACGCTGGCTTCTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCATTTGCATCCAGGAGTTAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp TTCCCATCTAACTCCTGGATGCAAATGGTTCCCAAGCCTTGGCCCTaGCTGGTCCCGAGAAGCCAGCGTGCACACACGGGATCTTCCGAG +
Preference number: 1 (lower is better)
Translates to: FPSNSWMQMVPKPWP*LVPRSQRAHTGSSE
Trigger: CTCGGAAGATCCCGTGTGTGCACGCTGGCTTCTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCATTTGCATCCAGGAGTTAGATGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp CAGAGTCCACCTTACAGGGCCCTGGAGGCCCGTGCCCCAAGGACCTaGGGCTCTCAGAACACACCTCGGTATTTAAATTGCAGGCATGAG +
Preference number: 1 (lower is better)
Translates to: QSPPYRALEARAPRT*GSQNTPRYLNCRHE
Trigger: CTCATGCCTGCAATTTAAATACCGAGGTGTGTTCTGAGAGCCCCAGGTCCTTGGGGCACGGGCCTCCAGGGCCCTGTAAGGTGGACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp CCTGCAGGACATAGGCATGTGTGGTATCAGATGGGGTTTGCAGGCTaGGCCCTCCAAGGGGAGGGCATCCATATGCTGGGTCAGGACACA +
Preference number: 1 (lower is better)
Translates to: PAGHRHVWYQMGFAG*ALQGEGIHMLGQDT
Trigger: TGTGTCCTGACCCAGCATATGGATGCCCTCCCCTTGGAGGGCCCAGCCTGCAAACCCCATCTGATACCACACATGCCTATGTCCTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp CACTTGTTCCCATCTAACTCCTGGATGCAAATGGTTCCCAAGCCTTaGCCCTGGCTGGTCCCGAGAAGCCAGCGTGCACACACGGGATCT +
Preference number: 1 (lower is better)
Translates to: HLFPSNSWMQMVPKP*PWLVPRSQRAHTGS
Trigger: AGATCCCGTGTGTGCACGCTGGCTTCTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCATTTGCATCCAGGAGTTAGATGGGAACAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp GGGAGATCAACACTAGAAGCTTCCCAGGAGACTCCAACGTGCAGCTaGCACTGCAAACCGCAGGCTGTGTCGAGTGGAGAGAAAGGGCGA +
Preference number: 1 (lower is better)
Translates to: GRSTLEASQETPTCS*HCKPQAVSSGEKGR
Trigger: TCGCCCTTTCTCTCCACTCGACACAGCCTGCGGTTTGCAGTGCCAGCTGCACGTTGGAGTCTCCTGGGAAGCTTCTAGTGTTGATCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp AGGGTCACTAGAAGCCTGCAGGACATAGGCATGTGTGGTATCAGATaGGGTTTGCAGGCTGGGCCCTCCAAGGGGAGGGCATCCATATGC +
Preference number: 1 (lower is better)
Translates to: RVTRSLQDIGMCGIR*GLQAGPSKGRASIC
Trigger: GCATATGGATGCCCTCCCCTTGGAGGGCCCAGCCTGCAAACCCCATCTGATACCACACATGCCTATGTCCTGCAGGCTTCTAGTGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 90 bp AACCAGGTGACCAGGAGTGACACTTGTTCCCATCTAACTCCTGGATaGAAATGGTTCCCAAGCCTTGGCCCTGGCTGGTCCCGAGAAGCC +
Preference number: 1 (lower is better)
Translates to: NQVTRSDTCSHLTPG*KWFPSLGPGWSREA
Trigger: GGCTTCTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCATTTGCATCCAGGAGTTAGATGGGAACAAGTGTCACTCCTGGTCACCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 90 bp TCAACACTAGAAGCTTCCCAGGAGACTCCAACGTGCAGCTGGCACTaGAAACCGCAGGCTGTGTCGAGTGGAGAGAAAGGGCGATGTGCT +
Preference number: 1 (lower is better)
Translates to: STLEASQETPTCSWH*KPQAVSSGEKGRCA
Trigger: AGCACATCGCCCTTTCTCTCCACTCGACACAGCCTGCGGTTTGCAGTGCCAGCTGCACGTTGGAGTCTCCTGGGAAGCTTCTAGTGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp ACACACACACCACACACACAGGCCCTCCCTCTGTCATGTCACTGTTaGAGCTACTGTCCACCATTTGGACGTGGCTTAGACACCCCCTGC +
Preference number: 1 (lower is better)
Translates to: THTPHTQALPLSCHC*SYCPPFGRGLDTPC
Trigger: GCAGGGGGTGTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGACAGAGGGAGGGCCTGTGTGTGTGGTGTGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 90 bp CTAGGAGGGAGATCAACACTAGAAGCTTCCCAGGAGACTCCAACGTaGAGCTGGCACTGCAAACCGCAGGCTGTGTCGAGTGGAGAGAAA +
Preference number: 1 (lower is better)
Translates to: LGGRSTLEASQETPT*SWHCKPQAVSSGEK
Trigger: TTTCTCTCCACTCGACACAGCCTGCGGTTTGCAGTGCCAGCTGCACGTTGGAGTCTCCTGGGAAGCTTCTAGTGTTGATCTCCCTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 90 bp CTTCAAGCGTGTCAGTTCTACACACACCATATACATGCACGTGCGTaGACACACAGCACACACACACACACCACACACACAGGCCCTCCC +
Preference number: 1 (lower is better)
Translates to: LQACQFYTHHIHARA*THSTHTHTTHTGPP
Trigger: GGGAGGGCCTGTGTGTGTGGTGTGTGTGTGTGTGCTGTGTGTGCACGCACGTGCATGTATATGGTGTGTGTAGAACTGACACGCTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 90 bp GGGACTTCAAGCGTGTCAGTTCTACACACACCATATACATGCACGTaGGTGCACACACAGCACACACACACACACCACACACACAGGCCC +
Preference number: 1 (lower is better)
Translates to: GTSSVSVLHTPYTCT*VHTQHTHTHHTHRP
Trigger: GGGCCTGTGTGTGTGGTGTGTGTGTGTGTGCTGTGTGTGCACGCACGTGCATGTATATGGTGTGTGTAGAACTGACACGCTTGAAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR TCA 90 bp GACCTGGGGCTCTCAGAACACACCTCGGTATTTAAATTGCAGGCATaGGGGAGCTCGGTAGGCAGTGCAAGGTCCTTCTTCACCATCAAG +
Preference number: 1 (lower is better)
Translates to: DLGLSEHTSVFKLQA*GSSVGSARSFFTIK
Trigger: CTTGATGGTGAAGAAGGACCTTGCACTGCCTACCGAGCTCCCTCATGCCTGCAATTTAAATACCGAGGTGTGTTCTGAGAGCCCCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp GACTCCAACGTGCAGCTGGCACTGCAAACCGCAGGCTGTGTCGAGTaGAGAGAAAGGGCGATGTGCTTTTCTGGAAACTCACGTTTTCTT +
Preference number: 1 (lower is better)
Translates to: DSNVQLALQTAGCVE*RERAMCFSGNSRFL
Trigger: AAGAAAACGTGAGTTTCCAGAAAAGCACATCGCCCTTTCTCTCCACTCGACACAGCCTGCGGTTTGCAGTGCCAGCTGCACGTTGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR TCA 90 bp TTGAGGGCAGCTTCAATCCATGCCCTCCAACCAGGTGACCAGGAGTaGCACTTGTTCCCATCTAACTCCTGGATGCAAATGGTTCCCAAG +
Preference number: 1 (lower is better)
Translates to: LRAASIHALQPGDQE*HLFPSNSWMQMVPK
Trigger: CTTGGGAACCATTTGCATCCAGGAGTTAGATGGGAACAAGTGTCACTCCTGGTCACCTGGTTGGAGGGCATGGATTGAAGCTGCCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 90 bp AGGAAGGAAGTCAGGGAAAGCAGCAGCTACTCTCAGAAAGAGGAGTaGAGGAGGAAAAGAGGAAGAGAAAGAGAGGAGGAGAAGGGGAGG +
Preference number: 1 (lower is better)
Translates to: RKEVRESSSYSQKEE*RRKRGREREEEKGR
Trigger: CCTCCCCTTCTCCTCCTCTCTTTCTCTTCCTCTTTTCCTCCTCCACTCCTCTTTCTGAGAGTAGCTGCTGCTTTCCCTGACTTCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR TCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCGCGCCCATAGGGACCTaGAGCTGCAGGGCCCCCGGG +
Preference number: 2 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRAPIGT*SCRAPG
Trigger: CCCGGGGGCCCTGCAGCTTCAGGTCCCTATGGGCGC...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR GCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGCTCTGGGCCACACTaGTGGGGCTGGAGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGCSGPH*WGWRPG
Trigger: GCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCA...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTTGCTCTGGGCCACACTaGTGGGGCTGGAGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: DRLGRGGVDHAADQQDVACSGPH*WGWRPG
Trigger: GCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCA...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCGCCCCCGGGCTGTCCTaGGCCGTGTCCCCATGGGCA +
Preference number: 2 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRAPGLS*AVSPWA
Trigger: TGCCCATGGGGACACGGCCCAGGACAGCCCGGGGGC...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR GCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGCCCTTGGCCAGTGGTTaGCCCTCTCTGGGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWPLASG*PSLGLS
Trigger: ACTGAGGCCCAGAGAGGGGCAACCACTGGCCAAGGG...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTTGGCAGTCGGCCCCTaGTCTGGGCCACACTGCTGG +
Preference number: 2 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGLAVGP*SGPHCW
Trigger: CCAGCAGTGTGGCCCAGAGCAGGGGCCGACTGCCAA...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTCGGGGTGGACCACGCTaGAGACCAGCAGGATGTGGC +
Preference number: 2 (lower is better)
Translates to: DRLGRGGVDHAADQQDVARGGPR*RPAGCG
Trigger: GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCG...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCCCCAAGCCTTGGCCCTaGCTGGTCCCGAGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGPKPWP*LVPRSQ
Trigger: CTGGCTTCTCGGGACCAGCCAGGGCCAAGGCTTGGG...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR GCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGACCCTTGGCCAGTGGTTaGCCCTCTCTGGGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGPLASG*PSLGLS
Trigger: ACTGAGGCCCAGAGAGGGGCAACCACTGGCCAAGGG...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp GGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCATGCTCTGGGCCACACTaGTGGGGCTGGAGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: GCPWQCPCCLFLPSGPASCSGPH*WGWRPG
Trigger: GCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCA...TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATGCTCTGGGCCACACTaGTGGGGCTGGAGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPCSGPH*WGWRPG
Trigger: GCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCA...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAAGCTGGGGAGAGGGATaGTGCGGGGCAGCCGGCCGT +
Preference number: 2 (lower is better)
Translates to: VPMLPLSAFRASITTRPISWGEG*CGAAGR
Trigger: ACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCT...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CAA 90 bp TGCTGCTGCAGCTCTGCGGAGGAGGCGCTCAGGTACCAGGACTGCTaGGCCCACTGCAGCTTCCACACATGCCCCGAGTCCAGCCTCTCC +
Preference number: 2 (lower is better)
Translates to: CCCSSAEEALRYQDC*AHCSFHTCPESSLS
Trigger: GGAGAGGCTGGACTCGGGGCATGTGTGGAAGCTGCAGTGGGCCAAGCAGTCCTGGTACCTGAGCGCCTCCTCCGCAGAGCTGCAGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR GCA 90 bp TGCGTGCACACACAGCACACACACACACACCACACACACAGGCCCTCCCTCTGTGGCCCTGGAGGCCCGTaGCCCAAGGACCTGGGGCTC +
Preference number: 2 (lower is better)
Translates to: CVHTQHTHTHHTHRPSLCGPGGP*PKDLGL
Trigger: GAGCCCCAGGTCCTTGGGGCACGGGCCTCCAGGGCC...ACAGAGGGAGGGCCTGTGTGTGTGGTGTGTGTGTGTGTGCTGTGTGTGCACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTCTGGGCCACACTGCTaGGGCTGGAGGCCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRSGPHC*GWRPGS
Trigger: AGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGA...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAAGTCGGCCCCTGCTCTaGGCCACACTGCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: VPMLPLSAFRASITTRPISRPLL*ATLLGL
Trigger: CAGCCCCAGCAGTGTGGCCCAGAGCAGGGGCCGACT...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCATGGTTCCCAAGCCTTaGCCCTGGCTGGTCCCGAGA +
Preference number: 2 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGMVPKP*PWLVPR
Trigger: TCTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCAT...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR TCA 90 bp CACACCTCGCTCCAGGTCTCACCGCTCTCTGACAGCCGCAGGGGGCCGCAGAGCCTCAAGGCCTGGACTTaGGGGCAGCTTCAATCCATG +
Preference number: 2 (lower is better)
Translates to: HTSLQVSPLSDSRRGPQSLKAWT*GQLQSM
Trigger: CATGGATTGAAGCTGCCCTCAAGTCCAGGCCTTGAG...GCTCTGCGGCCCCCTGCGGCTGTCAGAGAGCGGTGAGACCTGGAGCGAGGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR GCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCCGGGGTGGACCACGCTaGAGACCAGCAGGATGTGGC +
Preference number: 2 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGRGGPR*RPAGCG
Trigger: GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCG...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGACAGGTCCAATGTGGTaGTGTGCAGGGCAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLTGPMW*CAGQWE
Trigger: CTCCCACTGCCCTGCACACCACCACATTGGACCTGT...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAACAGGTCCAATGTGGTaGTGTGCAGGGCAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGTGPMW*CAGQWE
Trigger: CTCCCACTGCCCTGCACACCACCACATTGGACCTGT...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGAGCACAGGTCCAATGTaGTGGTGTGCAGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLSTGPM*WCAGQW
Trigger: CCACTGCCCTGCACACCACCACATTGGACCTGTGCT...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCAAGTGTCCTGAGCTCTaGGCTGTTGGCCCACCCTCA +
Preference number: 2 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGKCPEL*AVGPPS
Trigger: TGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTT...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGAGTCGGCCCCTGCTCTaGGCCACACTGCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRSRPLL*ATLLGL
Trigger: CAGCCCCAGCAGTGTGGCCCAGAGCAGGGGCCGACT...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAAGCCTTGGCCCTGGCTaGTCCCGAGAAGCCAGCGTG +
Preference number: 2 (lower is better)
Translates to: VPMLPLSAFRASITTRPISLGPG*SREASV
Trigger: CACGCTGGCTTCTCGGGACCAGCCAGGGCCAAGGCT...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CAA 90 bp TTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTaGGCAGTCGGCCCCTGCTCTGGGCCACACTGCTGGGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: FRASITTRPIWMMVT*AVGPCSGPHCWGWR
Trigger: CCTCCAGCCCCAGCAGTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR TCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGCCCTCCAACCAGGTaGCCAGGAGTGACACTTGTT +
Preference number: 2 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGCPPTR*PGVTLV
Trigger: AACAAGTGTCACTCCTGGTCACCTGGTTGGAGGGCA...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR TCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGCCCTGCTCACCCTCTaGCAGCTGGAGGTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYALLTL*QLEVRQ
Trigger: CTGCCTCACCTCCAGCTGTCAGAGGGTGAGCAGGGC...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR GCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATCCAATGTGGTGGTGTaGAGGGCAGTGGGAGACTCA +
Preference number: 2 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGSNVVV*RAVGDS
Trigger: TGAGTCTCCCACTGCCCTGCACACCACCACATTGGA...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATTTGGCAGTCGGCCCCTaGTCTGGGCCACACTGCTGG +
Preference number: 2 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYLAVGP*SGPHCW
Trigger: CCAGCAGTGTGGCCCAGAGCAGGGGCCGACTGCCAA...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp TGCACAGAGACTGGGACCAGCCTCACCCGGCTTGCAAGGGTCACTAGAAGCCTGCTGCCTCCAGGGCCCTaGTCACCCTCTGACAGCTGG +
Preference number: 2 (lower is better)
Translates to: CTETGTSLTRLARVTRSLLPPGP*SPSDSW
Trigger: CCAGCTGTCAGAGGGTGAGCAGGGCCCTGGAGGCAG...CAGGCTTCTAGTGACCCTTGCAAGCCGGGTGAGGCTGGTCCCAGTCTCTGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGTCGGCCCCTGCTCTaGGCCACACTGCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQSRPLL*ATLLGL
Trigger: CAGCCCCAGCAGTGTGGCCCAGAGCAGGGGCCGACT...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCCGTGCCCCAAGGACCTaGGGCTCTCAGAACACACCT +
Preference number: 2 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRRAPRT*GSQNTP
Trigger: AGGTGTGTTCTGAGAGCCCCAGGTCCTTGGGGCACG...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATACCTGGGGATCTGACATaGGGATGGCGGCCCACACCT +
Preference number: 2 (lower is better)
Translates to: VPMLPLSAFRASITTRPIPGDLT*GWRPTP
Trigger: AGGTGTGGGCCGCCATCCCCATGTCAGATCCCCAGG...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR TCA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCCAAAGCCAAGTGTCCTaGGCTCTGGGCTGTTGGCCC +
Preference number: 2 (lower is better)
Translates to: LLWATLLGLEARLLAKTCQSQVS*ALGCWP
Trigger: GGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTG...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR TCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTCACGGCCCATATGGATaGTGGTTACTTTGGCAGTCG +
Preference number: 2 (lower is better)
Translates to: DRLGRGGVDHAADQQDVAHGPYG*WLLWQS
Trigger: CGACTGCCAAAGTAACCATCATCCATATGGGCCGTG...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATCCCTTGGCCAGTGGTTaGCCCTCTCTGGGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYPLASG*PSLGLS
Trigger: ACTGAGGCCCAGAGAGGGGCAACCACTGGCCAAGGG...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCGGCTGTCCCTGGCAGTaGCCATGCTGCCTCTTTCTG +
Preference number: 2 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGGCPWQ*PCCLFL
Trigger: CAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGCCCGAGAAGCCAGCGTaGACACACGGGATCTTCCGA +
Preference number: 2 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLPEKPA*THGIFR
Trigger: TCGGAAGATCCCGTGTGTGCACGCTGGCTTCTCGGG...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CCA 90 bp GGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCAAGCACAGGTCCAATGTaGTGGTGTGCAGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: GCPWQCPCCLFLPSGPASSTGPM*WCAGQW
Trigger: CCACTGCCCTGCACACCACCACATTGGACCTGTGCT...TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGAGTCGGCCCCTGCTCTaGGCCACACTGCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLSRPLL*ATLLGL
Trigger: CAGCCCCAGCAGTGTGGCCCAGAGCAGGGGCCGACT...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACGGATGTGGCTGTCCCTaGCAGTGCCCATGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHGCGCP*QCPCCL
Trigger: GAGGCAGCATGGGCACTGCCAGGGACAGCCACATCC...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGATGGGCAGAGGCGGGGTaGACCACGCTGCAGACCAGC +
Preference number: 2 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRWAEAG*TTLQTS
Trigger: GCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCA...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGCAGCCGGCCGTCCTaGCTGCCTCCCTGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQAGSRPS*LPPCRC
Trigger: GCACCTGCAGGGAGGCAGCCAGGACGGCCGGCTGCC...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR TCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATCAAAGCCAAGTGTCCTaGGCTCTGGGCTGTTGGCCC +
Preference number: 2 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYQSQVS*ALGCWP
Trigger: GGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTG...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp GGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCATCCAATGTGGTGGTGTaGAGGGCAGTGGGAGACTCA +
Preference number: 2 (lower is better)
Translates to: GCPWQCPCCLFLPSGPASSNVVV*RAVGDS
Trigger: TGAGTCTCCCACTGCCCTGCACACCACCACATTGGA...TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTCCCTTGGCCAGTGGTTaGCCCTCTCTGGGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: SCACHSVAGVSPSRASERPLASG*PSLGLS
Trigger: ACTGAGGCCCAGAGAGGGGCAACCACTGGCCAAGGG...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACTGGGCAGAGGCGGGGTaGACCACGCTGCAGACCAGC +
Preference number: 2 (lower is better)
Translates to: SERGYLGTMSPARMGQAHWAEAG*TTLQTS
Trigger: GCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCA...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR TCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACAAAGCCAAGTGTCCTaGGCTCTGGGCTGTTGGCCC +
Preference number: 2 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATQSQVS*ALGCWP
Trigger: GGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTG...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR TCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTCAAAGCCAAGTGTCCTaGGCTCTGGGCTGTTGGCCC +
Preference number: 2 (lower is better)
Translates to: SCACHSVAGVSPSRASERQSQVS*ALGCWP
Trigger: GGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTG...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTCCAATGTGGTGGTGTaGAGGGCAGTGGGAGACTCA +
Preference number: 2 (lower is better)
Translates to: LLWATLLGLEARLLAKTCSNVVV*RAVGDS
Trigger: TGAGTCTCCCACTGCCCTGCACACCACCACATTGGA...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATACAAATCTCATGCGCCTaGCACTCAGTGGCTGGGGTA +
Preference number: 2 (lower is better)
Translates to: VPMLPLSAFRASITTRPIQISCA*HSVAGV
Trigger: TACCCCAGCCACTGAGTGGCAGGCGCATGAGATTTG...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACACAGGTCCAATGTGGTaGTGTGCAGGGCAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHTGPMW*CAGQWE
Trigger: CTCCCACTGCCCTGCACACCACCACATTGGACCTGT...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTTCTGGGCCACACTGCTaGGGCTGGAGGCCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSSGPHC*GWRPGS
Trigger: AGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGA...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGATGTGGCTGTCCCTaGCAGTGCCCATGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRGCGCP*QCPCCL
Trigger: GAGGCAGCATGGGCACTGCCAGGGACAGCCACATCC...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp TGCACAGAGACTGGGACCAGCCTCACCCGGCTTGCAAGGGTCACTAGAAGCCTGGTATCTCCCCTCAGGTaGGCCTCAAGGCCTGGACTT +
Preference number: 2 (lower is better)
Translates to: CTETGTSLTRLARVTRSLVSPLR*ASRPGL
Trigger: AAGTCCAGGCCTTGAGGCCCACCTGAGGGGAGATAC...CAGGCTTCTAGTGACCCTTGCAAGCCGGGTGAGGCTGGTCCCAGTCTCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR GCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGTCCAATGTGGTGGTGTaGAGGGCAGTGGGAGACTCA +
Preference number: 2 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRSNVVV*RAVGDS
Trigger: TGAGTCTCCCACTGCCCTGCACACCACCACATTGGA...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCTGTCCCTGGCAGTaGCCATGCTGCCTCTTTCTG +
Preference number: 2 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRGCPWQ*PCCLFL
Trigger: CAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp TGCACAGAGACTGGGACCAGCCTCACCCGGCTTGCAAGGGTCACTAGAAGCCTGCAAATCTCATGCGCCTaGCACTCAGTGGCTGGGGTA +
Preference number: 2 (lower is better)
Translates to: CTETGTSLTRLARVTRSLQISCA*HSVAGV
Trigger: TACCCCAGCCACTGAGTGGCAGGCGCATGAGATTTG...CAGGCTTCTAGTGACCCTTGCAAGCCGGGTGAGGCTGGTCCCAGTCTCTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGACAGGTCCAATGTGGTaGTGTGCAGGGCAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQTGPMW*CAGQWE
Trigger: CTCCCACTGCCCTGCACACCACCACATTGGACCTGT...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGCACAGGTCCAATGTaGTGGTGTGCAGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQSTGPM*WCAGQW
Trigger: CCACTGCCCTGCACACCACCACATTGGACCTGTGCT...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGAGCACAGGTCCAATGTaGTGGTGTGCAGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWSTGPM*WCAGQW
Trigger: CCACTGCCCTGCACACCACCACATTGGACCTGTGCT...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGCCAGGGCGCTCTTCATaGGGCCTCCAACACCACCTC +
Preference number: 2 (lower is better)
Translates to: LCATSIRNSHKSHAPATQPGRSS*GLQHHL
Trigger: GAGGTGGTGTTGGAGGCCCCATGAAGAGCGCCCTGG...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCCTACTGTCCACCATTTaGACGTGGCTTAGACACCCC +
Preference number: 2 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGLLSTI*TWLRHP
Trigger: GGGGTGTCTAAGCCACGTCCAAATGGTGGACAGTAG...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CAA 90 bp ACTAGAAGCCTGCAGGACATAGGCATGTGTGGTATCAGATGGGGTTaGCAGGCTGGGCCCTCCAAGGGGAGGGCATCCATATGCTGGGTC +
Preference number: 2 (lower is better)
Translates to: TRSLQDIGMCGIRWG*QAGPSKGRASICWV
Trigger: GACCCAGCATATGGATGCCCTCCCCTTGGAGGGCCCAGCCTGCAAACCCCATCTGATACCACACATGCCTATGTCCTGCAGGCTTCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR TCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGCAAAGCCAAGTGTCCTaGGCTCTGGGCTGTTGGCCC +
Preference number: 2 (lower is better)
Translates to: LCATSIRNSHKSHAPATQQSQVS*ALGCWP
Trigger: GGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTG...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR TCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACCCAGGTGACCAGGAGTaGCACTTGTTCCCATCTAAC +
Preference number: 2 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHPGDQE*HLFPSN
Trigger: GTTAGATGGGAACAAGTGTCACTCCTGGTCACCTGG...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR GCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGTCCAATGTGGTGGTGTaGAGGGCAGTGGGAGACTCA +
Preference number: 2 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQSNVVV*RAVGDS
Trigger: TGAGTCTCCCACTGCCCTGCACACCACCACATTGGA...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCTTGGCAGTCGGCCCCTaGTCTGGGCCACACTGCTGG +
Preference number: 2 (lower is better)
Translates to: ADKHCVPLASGTATNLMRLAVGP*SGPHCW
Trigger: CCAGCAGTGTGGCCCAGAGCAGGGGCCGACTGCCAA...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCGGGGTGGACCACGCTaGAGACCAGCAGGATGTGGC +
Preference number: 2 (lower is better)
Translates to: ADKHCVPLASGTATNLMRRGGPR*RPAGCG
Trigger: GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCG...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGTCTGGGCCACACTGCTaGGGCTGGAGGCCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQSGPHC*GWRPGS
Trigger: AGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGA...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGGCAGGCTGTGTCGAGTaGAGAGAAAGGGCGATGTGC +
Preference number: 2 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLAGCVE*RERAMC
Trigger: GCACATCGCCCTTTCTCTCCACTCGACACAGCCTGC...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCGTAAGTCAGAGCAGCTaGGACTCTGAAAACACACTG +
Preference number: 2 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRVSQSS*DSENTL
Trigger: CAGTGTGTTTTCAGAGTCCCAGCTGCTCTGACTTAC...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CAA 90 bp CACACACACACCACACACACAGGCCCTCCCTCTGTCATGTCACTGTaGGAGCTACTGTCCACCATTTGGACGTGGCTTAGACACCCCCTG +
Preference number: 2 (lower is better)
Translates to: HTHTTHTGPPSVMSL*ELLSTIWTWLRHPL
Trigger: CAGGGGGTGTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGACAGAGGGAGGGCCTGTGTGTGTGGTGTGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR TCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGCACGGCCCATATGGATaGTGGTTACTTTGGCAGTCG +
Preference number: 2 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQHGPYG*WLLWQS
Trigger: CGACTGCCAAAGTAACCATCATCCATATGGGCCGTG...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGACCCTTGGCCAGTGGTTaGCCCTCTCTGGGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: HSVAGVSPSRASERGYLGPLASG*PSLGLS
Trigger: ACTGAGGCCCAGAGAGGGGCAACCACTGGCCAAGGG...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGACAGCCACAAATCTCATaGGCCTGCCACTCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRQPQIS*ACHSVA
Trigger: AGCCACTGAGTGGCAGGCGCATGAGATTTGTGGCTG...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCGGATGTGGCTGTCCCTaGCAGTGCCCATGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: ADKHCVPLASGTATNLMRGCGCP*QCPCCL
Trigger: GAGGCAGCATGGGCACTGCCAGGGACAGCCACATCC...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGGATGTGGCTGTCCCTaGCAGTGCCCATGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQGCGCP*QCPCCL
Trigger: GAGGCAGCATGGGCACTGCCAGGGACAGCCACATCC...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCAAAGTGTCCTGAGCTCTaGGCTGTTGGCCCACCCTCA +
Preference number: 2 (lower is better)
Translates to: KHCVPLASGTATNLMRLPKCPEL*AVGPPS
Trigger: TGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTT...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGAACCACACGGCCCATATaGATGATGGTTACTTTGGCA +
Preference number: 2 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGTTRPI*MMVTLA
Trigger: TGCCAAAGTAACCATCATCCATATGGGCCGTGTGGT...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR TCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACCACGGCCCATATGGATaGTGGTTACTTTGGCAGTCG +
Preference number: 2 (lower is better)
Translates to: SERGYLGTMSPARMGQAHHGPYG*WLLWQS
Trigger: CGACTGCCAAAGTAACCATCATCCATATGGGCCGTG...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR TCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGATTTAAATTGCAGGCATaGGGGAGCTCGGTAGGCAGT +
Preference number: 2 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRFKLQA*GSSVGS
Trigger: ACTGCCTACCGAGCTCCCTCATGCCTGCAATTTAAA...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR GCA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTCAGCCACAAATCTCATaGGCCTGCCACTCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQAQPQIS*ACHSVA
Trigger: AGCCACTGAGTGGCAGGCGCATGAGATTTGTGGCTG...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR GCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCCATCTAACTCCTGGATaGAAATGGTTCCCAAGCCTT +
Preference number: 2 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLHLTPG*KWFPSL
Trigger: AAGGCTTGGGAACCATTTGCATCCAGGAGTTAGATG...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CCA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACAGGTCCAATGTGGTaGTGTGCAGGGCAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: HSVAGVSPSRASERGYLGTGPMW*CAGQWE
Trigger: CTCCCACTGCCCTGCACACCACCACATTGGACCTGT...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCAGCACAGGTCCAATGTaGTGGTGTGCAGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: ADKHCVPLASGTATNLMRSTGPM*WCAGQW
Trigger: CCACTGCCCTGCACACCACCACATTGGACCTGTGCT...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTCCAGGGCGCTCTTCATaGGGCCTCCAACACCACCTC +
Preference number: 2 (lower is better)
Translates to: VSPSRASERGYLGTMSPAPGRSS*GLQHHL
Trigger: GAGGTGGTGTTGGAGGCCCCATGAAGAGCGCCCTGG...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR TCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGCACGGCCCATATGGATaGTGGTTACTTTGGCAGTCG +
Preference number: 2 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQHGPYG*WLLWQS
Trigger: CGACTGCCAAAGTAACCATCATCCATATGGGCCGTG...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp TGCGTGCACACACAGCACACACACACACACCACACACACAGGCCCTCCCTCTGTGGCGATGTGCTTTTCTaGAAACTCACGTTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: CVHTQHTHTHHTHRPSLCGDVLF*KLTFSF
Trigger: AAAAGAAAACGTGAGTTTCCAGAAAAGCACATCGCC...ACAGAGGGAGGGCCTGTGTGTGTGGTGTGTGTGTGTGTGCTGTGTGTGCACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR TCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTCACGGCCCATATGGATaGTGGTTACTTTGGCAGTCG +
Preference number: 2 (lower is better)
Translates to: VSPSRASERGYLGTMSPAHGPYG*WLLWQS
Trigger: CGACTGCCAAAGTAACCATCATCCATATGGGCCGTG...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCACACGGCCCATATaGATGATGGTTACTTTGGCA +
Preference number: 2 (lower is better)
Translates to: HSVAGVSPSRASERGYLGTTRPI*MMVTLA
Trigger: TGCCAAAGTAACCATCATCCATATGGGCCGTGTGGT...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGGCATCCATATGCTaGGTCAGGACACATCAAAAT +
Preference number: 2 (lower is better)
Translates to: VSPSRASERGYLGTMSPARASIC*VRTHQN
Trigger: ATTTTGATGTGTCCTGACCCAGCATATGGATGCCCT...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR TCA 72 bp GACTCAGCTCACGGAGCAGCTGCGCCCATAGGGACCTaGAGCTGCAGGGCCCCCGGGCTGTCCTGGGCCGTG +
Preference number: 3 (lower is better)
Translates to: DSAHGAAAPIGT*SCRAPGLSWAV
Trigger: CACGGCCCAGGACAGCCCGGGGGCCCTGCAGCTTCAGGTCCCTATGGGCGCAGCTGCTCCGTGAGCTGAGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 72 bp GTGCAGGGCAGTGGGAGACTCAGCTCACGGAGCAGCTaGGCCCATAGGGACCTGAAGCTGCAGGGCCCCCGG +
Preference number: 3 (lower is better)
Translates to: VQGSGRLSSRSS*AHRDLKLQGPR
Trigger: CCGGGGGCCCTGCAGCTTCAGGTCCCTATGGGCGCAGCTGCTCCGTGAGCTGAGTCTCCCACTGCCCTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CAA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCAATGGTTCCCAAGCCTaGGCCCTGGCTGGTCCCGAG +
Preference number: 3 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGNGSQA*ALAGPE
Trigger: CTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCATT...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 72 bp TGCCTCCCTGCAGGTGCAGCACCTGGGGATCTGACATaGGGATGGCGGCCCACACCTCGCTCCAGGTCTCAC +
Preference number: 3 (lower is better)
Translates to: CLPAGAAPGDLT*GWRPTPRSRSH
Trigger: GTGAGACCTGGAGCGAGGTGTGGGCCGCCATCCCCATGTCAGATCCCCAGGTGCTGCACCTGCAGGGAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 72 bp TGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATaGGGCCTCCAACACCACCTCCCAGGACAGCACAGG +
Preference number: 3 (lower is better)
Translates to: CWPTLSSPGRSS*GLQHHLPGQHR
Trigger: CCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR CCA 72 bp GCTCTGCGGAGGAGGCGCTCAGGTACCAGGACTGCTTaGCCCACTGCAGCTTCCACACATGCCCCGAGTCCA +
Preference number: 3 (lower is better)
Translates to: ALRRRRSGTRTA*PTAASTHAPSP
Trigger: TGGACTCGGGGCATGTGTGGAAGCTGCAGTGGGCCAAGCAGTCCTGGTACCTGAGCGCCTCCTCCGCAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CAA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGGCTCTTAGCCAAAACTaGCTGGGTGACCCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWALSQN*LGDPWP
Trigger: TGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR GCA 72 bp CCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTaGTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: PIWMMVTLAVGP*SGPHCWGWRPG
Trigger: GCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR GCA 72 bp CAAGCCTTGGCCCTGGCTGGTCCCGAGAAGCCAGCGTaGACACACGGGATCTTCCGAGTGTGTTCCCAGCCT +
Preference number: 3 (lower is better)
Translates to: QALALAGPEKPA*THGIFRVCSQP
Trigger: AGGCTGGGAACACACTCGGAAGATCCCGTGTGTGCACGCTGGCTTCTCGGGACCAGCCAGGGCCAAGGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 72 bp CCATGGGCAGCAGTGCTTAGGGTTTCCAGCCACTGCTaGTGCAGCTCTGCGGAGGAGGCGCTCAGGTACCAG +
Preference number: 3 (lower is better)
Translates to: PWAAVLRVSSHC*CSSAEEALRYQ
Trigger: CTGGTACCTGAGCGCCTCCTCCGCAGAGCTGCAGCAGCAGTGGCTGGAAACCCTAAGCACTGCTGCCCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CAA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGGCTCTTAGCCAAAACTaGCTGGGTGACCCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLALSQN*LGDPWP
Trigger: TGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CAA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGGATGATGGTTACTTaGGCAGTCGGCCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGWMMVT*AVGPCS
Trigger: AGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCA...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CAA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATCTGAGCTCTGGGCTGTaGGCCCACCCTCAGCAGTCC +
Preference number: 3 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDLSSGL*AHPQQS
Trigger: GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAG...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR TCA 72 bp CCTTCCGGGCCAGCATCACCACACGGCCCATATGGATaGTGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: PSGPASPHGPYG*WLLWQSAPALG
Trigger: GCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR GCA 72 bp CACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTaGAGGGCAGTGGGAGACTCAGCTCACGGAGCAGCT +
Preference number: 3 (lower is better)
Translates to: HLPGQHRSNVVV*RAVGDSAHGAA
Trigger: AGCTGCTCCGTGAGCTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 72 bp CCTGGATGCAAATGGTTCCCAAGCCTTGGCCCTGGCTaGTCCCGAGAAGCCAGCGTGCACACACGGGATCTT +
Preference number: 3 (lower is better)
Translates to: PGCKWFPSLGPG*SREASVHTRDL
Trigger: AAGATCCCGTGTGTGCACGCTGGCTTCTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCATTTGCATCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 72 bp AACTCCTGGATGCAAATGGTTCCCAAGCCTTGGCCCTaGCTGGTCCCGAGAAGCCAGCGTGCACACACGGGA +
Preference number: 3 (lower is better)
Translates to: NSWMQMVPKPWP*LVPRSQRAHTG
Trigger: TCCCGTGTGTGCACGCTGGCTTCTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCATTTGCATCCAGGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 72 bp AACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTaGTGTGCAGGGCAGTGGGAGACTCAGCTCACGGAG +
Preference number: 3 (lower is better)
Translates to: NTTSQDSTGPMW*CAGQWETQLTE
Trigger: CTCCGTGAGCTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 72 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTaGTGGTGTGCAGGGCAGTGGGAGACTCAGCTCACG +
Preference number: 3 (lower is better)
Translates to: SNTTSQDSTGPM*WCAGQWETQLT
Trigger: CGTGAGCTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CAA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACCTGAGCTCTGGGCTGTaGGCCCACCCTCAGCAGTCC +
Preference number: 3 (lower is better)
Translates to: SERGYLGTMSPARMGQAHLSSGL*AHPQQS
Trigger: GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAG...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CAA 90 bp GCTGTGGAGACATGGCCAAGATCTGCACAGAGACTGGGACCAGCCTCACCCGGCTGGATGATGGTTACTTaGGCAGTCGGCCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: AVETWPRSAQRLGPASPGWMMVT*AVGPCS
Trigger: AGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCA...GCCGGGTGAGGCTGGTCCCAGTCTCTGTGCAGATCTTGGCCATGTCTCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR TCA 72 bp AGTATCTCCCCTCAGGTGGGCCTCAAGGCCTGGACTTaGGGGCAGCTTCAATCCATGCCCTCCAACCAGGTG +
Preference number: 3 (lower is better)
Translates to: SISPQVGLKAWT*GQLQSMPSNQV
Trigger: CACCTGGTTGGAGGGCATGGATTGAAGCTGCCCTCAAGTCCAGGCCTTGAGGCCCACCTGAGGGGAGATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 72 bp GAAGCTTCCCAGGAGACTCCAACGTGCAGCTGGCACTaGAAACCGCAGGCTGTGTCGAGTGGAGAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: EASQETPTCSWH*KPQAVSSGEKG
Trigger: CCCTTTCTCTCCACTCGACACAGCCTGCGGTTTGCAGTGCCAGCTGCACGTTGGAGTCTCCTGGGAAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 72 bp TCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATaGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: SAFRASITTRPI*MMVTLAVGPCS
Trigger: AGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR CCA 72 bp CCATCTAACTCCTGGATGCAAATGGTTCCCAAGCCTTaGCCCTGGCTGGTCCCGAGAAGCCAGCGTGCACAC +
Preference number: 3 (lower is better)
Translates to: PSNSWMQMVPKP*PWLVPRSQRAH
Trigger: GTGTGCACGCTGGCTTCTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCATTTGCATCCAGGAGTTAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 72 bp CCTTACAGGGCCCTGGAGGCCCGTGCCCCAAGGACCTaGGGCTCTCAGAACACACCTCGGTATTTAAATTGC +
Preference number: 3 (lower is better)
Translates to: PYRALEARAPRT*GSQNTPRYLNC
Trigger: GCAATTTAAATACCGAGGTGTGTTCTGAGAGCCCCAGGTCCTTGGGGCACGGGCCTCCAGGGCCCTGTAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 72 bp AGAAGCCTGCAGGACATAGGCATGTGTGGTATCAGATaGGGTTTGCAGGCTGGGCCCTCCAAGGGGAGGGCA +
Preference number: 3 (lower is better)
Translates to: RSLQDIGMCGIR*GLQAGPSKGRA
Trigger: TGCCCTCCCCTTGGAGGGCCCAGCCTGCAAACCCCATCTGATACCACACATGCCTATGTCCTGCAGGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CAA 90 bp GTGCGTGCACACACAGCACACACACACACACCACACACACAGGCCCTCCCTCTGGCTCTTAGCCAAAACTaGCTGGGTGACCCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: VRAHTAHTHTPHTQALPLALSQN*LGDPWP
Trigger: TGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC...CAGAGGGAGGGCCTGTGTGTGTGGTGTGTGTGTGTGTGCTGTGTGTGCACGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CAA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGTGGATGATGGTTACTTaGGCAGTCGGCCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRWMMVT*AVGPCS
Trigger: AGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCA...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR-3UTR CAA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTTGGATGATGGTTACTTaGGCAGTCGGCCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: SCACHSVAGVSPSRASERWMMVT*AVGPCS
Trigger: AGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCA...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR CCA 72 bp ACACTAGAAGCTTCCCAGGAGACTCCAACGTGCAGCTaGCACTGCAAACCGCAGGCTGTGTCGAGTGGAGAG +
Preference number: 3 (lower is better)
Translates to: TLEASQETPTCS*HCKPQAVSSGE
Trigger: CTCTCCACTCGACACAGCCTGCGGTTTGCAGTGCCAGCTGCACGTTGGAGTCTCCTGGGAAGCTTCTAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR-3UTR CAA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGTGGATGATGGTTACTTaGGCAGTCGGCCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLWMMVT*AVGPCS
Trigger: AGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCA...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
3UTR CCA 72 bp ATGTCACTGTTGGAGCTACTGTCCACCATTTGGACGTaGCTTAGACACCCCCTGCCAGAGCTGGACCCCTCA +
Preference number: 3 (lower is better)
Translates to: MSLLELLSTIWT*LRHPLPELDPS
Trigger: TGAGGGGTCCAGCTCTGGCAGGGGGTGTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 72 bp GTGCAGCTGGCACTGCAAACCGCAGGCTGTGTCGAGTaGAGAGAAAGGGCGATGTGCTTTTCTGGAAACTCA +
Preference number: 3 (lower is better)
Translates to: VQLALQTAGCVE*RERAMCFSGNS
Trigger: TGAGTTTCCAGAAAAGCACATCGCCCTTTCTCTCCACTCGACACAGCCTGCGGTTTGCAGTGCCAGCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CCA 72 bp TCTGTCATGTCACTGTTGGAGCTACTGTCCACCATTTaGACGTGGCTTAGACACCCCCTGCCAGAGCTGGAC +
Preference number: 3 (lower is better)
Translates to: SVMSLLELLSTI*TWLRHPLPELD
Trigger: GTCCAGCTCTGGCAGGGGGTGTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR TCA 72 bp GCTTCAATCCATGCCCTCCAACCAGGTGACCAGGAGTaGCACTTGTTCCCATCTAACTCCTGGATGCAAATG +
Preference number: 3 (lower is better)
Translates to: ASIHALQPGDQE*HLFPSNSWMQM
Trigger: CATTTGCATCCAGGAGTTAGATGGGAACAAGTGTCACTCCTGGTCACCTGGTTGGAGGGCATGGATTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR TCA 72 bp CTCTCAGAACACACCTCGGTATTTAAATTGCAGGCATaGGGGAGCTCGGTAGGCAGTGCAAGGTCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: LSEHTSVFKLQA*GSSVGSARSFF
Trigger: GAAGAAGGACCTTGCACTGCCTACCGAGCTCCCTCATGCCTGCAATTTAAATACCGAGGTGTGTTCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR GCA 72 bp AGCGTGTCAGTTCTACACACACCATATACATGCACGTaGGTGCACACACAGCACACACACACACACCACACA +
Preference number: 3 (lower is better)
Translates to: SVSVLHTPYTCT*VHTQHTHTHHT
Trigger: TGTGTGGTGTGTGTGTGTGTGCTGTGTGTGCACGCACGTGCATGTATATGGTGTGTGTAGAACTGACACGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp CACACCTCGCTCCAGGTCTCACCGCTCTCTGACAGCCGCAGGGGGCCGCAGAGCTGGGGAGAGGGATGGTaGGGGGCAGCCGGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: HTSLQVSPLSDSRRGPQSWGEGW*GAAGRP
Trigger: AGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCCA...GCTCTGCGGCCCCCTGCGGCTGTCAGAGAGCGGTGAGACCTGGAGCGAGGTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGAGCTGGGGAGAGGGATaGTGCGGGGCAGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWSWGEG*CGAAGR
Trigger: ACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCT...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCGGCCCACACCTCGCTCCAGGTCTCACCGCTCTCTGACAGCCGCAGGGGGCCGGTCCAGGGCCATCTCTaGGTGCGCCCCCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: AAHTSLQVSPLSDSRRGPVQGHL*VRPQYS
Trigger: ACTGTACTGGGGGCGCACGCAGAGATGGCCCTGGAC...CGGCCCCCTGCGGCTGTCAGAGAGCGGTGAGACCTGGAGCGAGGTGTGGGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCCGCCTGGCTCCGTGCTaGGGTCTGGGGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTRLAPC*GLGLAG
Trigger: GCCGGCCAACCCCAGACCCCAGCACGGAGCCAGGCG...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCGGCAGCCGGCCGTCCTaGCTGCCTCCCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTGSRPS*LPPCRC
Trigger: GCACCTGCAGGGAGGCAGCCAGGACGGCCGGCTGCC...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTTCTGGGGGCCAGAGTaGTGGGCCAGGCCGGCATCC +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLFWGPE*WARPAS
Trigger: GGATGCCGGCCTGGCCCAGCACTCTGGCCCCCAGAA...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCGGCCCACACCTCGCTCCAGGTCTCACCGCTCTCTGACAGCCGCAGGGGGCCGAGCTCACGGAGCAGCTaGGCCCATAGGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: AAHTSLQVSPLSDSRRGPSSRSS*AHRDLK
Trigger: CTTCAGGTCCCTATGGGCGCAGCTGCTCCGTGAGCT...CGGCCCCCTGCGGCTGTCAGAGAGCGGTGAGACCTGGAGCGAGGTGTGGGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGCTCTGGGCCACACTaGTGGGGCTGGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGCSGPH*WGWRPG
Trigger: GCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCA...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CACACCTCGCTCCAGGTCTCACCGCTCTCTGACAGCCGCAGGGGGCCGCAGAGCCGGGGTGGACCACGCTaGAGACCAGCAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: HTSLQVSPLSDSRRGPQSRGGPR*RPAGCG
Trigger: GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCG...GCTCTGCGGCCCCCTGCGGCTGTCAGAGAGCGGTGAGACCTGGAGCGAGGTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp CACACTCAGTTTGCAGCTGGGGAGAGGGATGGTGCGGGGCAGCCGGCCGTCCTGGGTGTCTGGAGGCTCTaGCGCGCCACCAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: HTQFAAGERDGAGQPAVLGVWRL*RATRRG
Trigger: TCCCCTCCTGGTGGCGCGGCAGAGCCTCCAGACACC...CAGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCTGCAAACTGAGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGACCCCACAGTGGGCTCTaGGCCCAACAGGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGPHSGL*AQQGAP
Trigger: AGGCGCTCCCTGTTGGGCCCAGAGCCCACTGTGGGG...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTGGGGGCCAGAGTGCTaGGCCAGGCCGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLWGPEC*ARPASL
Trigger: CAAGGATGCCGGCCTGGCCCAGCACTCTGGCCCCCA...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAAGTCGGCCCCTGCTCTaGGCCACACTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGSRPLL*ATLLGL
Trigger: CAGCCCCAGCAGTGTGGCCCAGAGCAGGGGCCGACT...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCCAGCACCTGGGGATCTaGCATGGGGATGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGQHLGI*HGDGGP
Trigger: TGGGCCGCCATCCCCATGTCAGATCCCCAGGTGCTG...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CAGAGACTGGGACCAGCCTCACCCGGCTTGCAAGGGTCACTAGAAGCCTGCAGGGCGCCCATAGGGACCTaGAGCTGCAGGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: QRLGPASPGLQGSLEACRAPIGT*SCRAPG
Trigger: CCCGGGGGCCCTGCAGCTTCAGGTCCCTATGGGCGC...CCTGCAGGCTTCTAGTGACCCTTGCAAGCCGGGTGAGGCTGGTCCCAGTCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTTGAGCAGGCAGGTGTaGCTCTGGGCAGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLLSRQV*LWAGRG
Trigger: GCCACGCCCTGCCCAGAGGCACACCTGCCTGCTCAA...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR GCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTAGGGCCATCTCTGCGTaGGCCCCCAGTACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: DRLGRGGVDHAADQQDVARAISA*APSTVG
Trigger: CCCCACTGTACTGGGGGCGCACGCAGAGATGGCCCT...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGGGGAGAGGGATGGTaGGGGGCAGCCGGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRWGEGW*GAAGRP
Trigger: AGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCCA...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGCTGGGCTGGGGGTCTaGAGTGGGTGTCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: DRLGRGGVDHAADQQDVAAGLGV*SGCLLG
Trigger: CCCCAGAAGACACCCACTGCAGACCCCCAGCCCAGC...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp TGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCCGCCTGGCTCCGTGCTaGGGTCTGGGGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: WGLQHHLPGQHRSNVVVCRLAPC*GLGLAG
Trigger: GCCGGCCAACCCCAGACCCCAGCACGGAGCCAGGCG...GCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAACAGGGTCCCCACAGTaGGCTCTGGGCCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGTGSPQ*ALGPTG
Trigger: CCCTGTTGGGCCCAGAGCCCACTGTGGGGACCCTGT...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGAAGAGGTGGCGGTCCTaGGGGGTGCCGTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWKRWRS*GVPFLA
Trigger: AGCCAAGAACGGCACCCCCCAGGACCGCCACCTCTT...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAGGCAGCCGGCCGTCCTaGCTGCCTCCCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPIGSRPS*LPPCRC
Trigger: GCACCTGCAGGGAGGCAGCCAGGACGGCCGGCTGCC...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTCTGGGCCACACTGCTaGGGCTGGAGGCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGSGPHC*GWRPGS
Trigger: AGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGA...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGGGATGTGGCTGTCCCTaGCAGTGCCCATGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWGCGCP*QCPCCL
Trigger: GAGGCAGCATGGGCACTGCCAGGGACAGCCACATCC...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCGGTCTCACCGCTCTCTaGCAGCCGCAGGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGGLTAL*QPQGAA
Trigger: TGCGGCCCCCTGCGGCTGTCAGAGAGCGGTGAGACC...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGCGCCCATAGGGACCTaGAGCTGCAGGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRAPIGT*SCRAPG
Trigger: CCCGGGGGCCCTGCAGCTTCAGGTCCCTATGGGCGC...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGAGCGCCCATAGGGACCTaGAGCTGCAGGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGAPIGT*SCRAPG
Trigger: CCCGGGGGCCCTGCAGCTTCAGGTCCCTATGGGCGC...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGCAAAGCCAAGTGTCCTaGGCTCTGGGCTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWQSQVS*ALGCWP
Trigger: GGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTG...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATCCGGCAGCAGGAACTaGCCGTGGAAGCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGSGSRN*PWKRWM
Trigger: CATCCACCGCTTCCACGGGCAGTTCCTGCTGCCGGA...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCTACCGGGGGACCCTCTaGACGGGCTCCAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTYRGTL*TGSSMW
Trigger: CCACATGCTGGAGCCCGTGCAGAGGGTCCCCCGGTA...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGACTGCAGACACGGCTCTaGCGGCTGTTCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGLQTRL*RLFSAL
Trigger: CAAGGCCGAGAACAGCCGGCAGAGCCGTGTCTGCAG...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCTGGGGAGAGGGATGGTaGGGGGCAGCCGGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: WGLQHHLPGQHRSNVVVCWGEGW*GAAGRP
Trigger: AGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCCA...GCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCCCCTTGGCCAGTGGTTaGCCCTCTCTGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGPLASG*PSLGLS
Trigger: ACTGAGGCCCAGAGAGGGGCAACCACTGGCCAAGGG...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTCCCTTGGCCAGTGGTTaGCCCTCTCTGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: DRLGRGGVDHAADQQDVAPLASG*PSLGLS
Trigger: ACTGAGGCCCAGAGAGGGGCAACCACTGGCCAAGGG...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATGGAGGGCCGGGCTGTaGTTCCCGCGCCAATCAGCC +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPWRAGL*FPRQSA
Trigger: GGCTGATTGGCGCGGGAAGCACAGCCCGGCCCTCCA...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375482.8
CDS-3UTR GCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGCAGTGGGTGTCTCTGTaGTCTCAGGGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWQWVSL*SQGPLA
Trigger: AGCCAGTGGCCCCTGAGAGCACAGAGACACCCACTG...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR GCA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGGGCCCTGGAGGCCCGTaGCCCAAGGACCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVGPGGP*PKDLGL
Trigger: GAGCCCCAGGTCCTTGGGGCACGGGCCTCCAGGGCC...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GTGCGTGCACACACAGCACACACACACACACCACACACACAGGCCCTCCCTCTGGCGGGCACAGGCGCCTaGCTCCGTGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VRAHTAHTHTPHTQALPLAGTGA*LRAGVW
Trigger: CCAGACCCCAGCACGGAGCCAGGCGCCTGTGCCCGC...CAGAGGGAGGGCCTGTGTGTGTGGTGTGTGTGTGTGTGCTGTGTGTGCACGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCACAGGGTCCCCACAGTaGGCTCTGGGCCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTTGSPQ*ALGPTG
Trigger: CCCTGTTGGGCCCAGAGCCCACTGTGGGGACCCTGT...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGGTGACCTTCGGGACCTaGCTGTCCAGGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWVTFGT*LSRAIS
Trigger: AGAGATGGCCCTGGACAGCCAGGTCCCGAAGGTCAC...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGGGGGCCAGAGTGCTaGGCCAGGCCGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRWGPEC*ARPASL
Trigger: CAAGGATGCCGGCCTGGCCCAGCACTCTGGCCCCCA...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCAACAGTGGGGAGCGCTaGGTCCACGTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGNSGER*VHVLTS
Trigger: GCTGGTGAGCACGTGGACCCAGCGCTCCCCACTGTT...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCACGCATCCTTCCGGTCTaGGGCGTCCTGCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPRILPV*GVLREP
Trigger: AGGCTCCCGCAGGACGCCCCAGACCGGAAGGATGCG...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGGGCAGCCGGCCGTCCTaGCTGCCTCCCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SQDSTGPMWWCAGQWETQGSRPS*LPPCRC
Trigger: GCACCTGCAGGGAGGCAGCCAGGACGGCCGGCTGCC...CTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGCCCCCGGGCTGTCCTaGGCCGTGTCCCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRAPGLS*AVSPWA
Trigger: TGCCCATGGGGACACGGCCCAGGACAGCCCGGGGGC...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CACACTCAGTTTGCAGCTGGGGAGAGGGATGGTGCGGGGCAGCCGGCCGTCCTGGGATGTGGCTGTCCCTaGCAGTGCCCATGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HTQFAAGERDGAGQPAVLGCGCP*QCPCCL
Trigger: GAGGCAGCATGGGCACTGCCAGGGACAGCCACATCC...CAGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCTGCAAACTGAGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAGGATGTGGCTGTCCCTaGCAGTGCCCATGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGGCGCP*QCPCCL
Trigger: GAGGCAGCATGGGCACTGCCAGGGACAGCCACATCC...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCCCCAAGCCTTGGCCCTaGCTGGTCCCGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTPKPWP*LVPRSQ
Trigger: CTGGCTTCTCGGGACCAGCCAGGGCCAAGGCTTGGG...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCTGTCCCACTCCTCCGTaGTCCGCGTCTTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTCPTPP*SASSAP
Trigger: CGGAGCTGAAGACGCGGATCACGGAGGAGTGGGACA...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGGGTCCTCATCCTGGCTaGAGGCGCCACCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLGPHPG*RRHQKP
Trigger: AGGCTTTTGGTGGCGCCTTCAGCCAGGATGAGGACC...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCGGTCCTCATCCTGGCTaGAGGCGCCACCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGGPHPG*RRHQKP
Trigger: AGGCTTTTGGTGGCGCCTTCAGCCAGGATGAGGACC...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCGGCTGTTCTCGGCCTTaGACTCGGAGCACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGGCSRP*TRSTSH
Trigger: GTGGGAAGTGCTCCGAGTTCAAGGCCGAGAACAGCC...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCCAGCACCTGGGGATCTaGCATGGGGATGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRQHLGI*HGDGGP
Trigger: TGGGCCGCCATCCCCATGTCAGATCCCCAGGTGCTG...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCAGCCCTGCTCACCCTCTaGCAGCTGGAGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GCPWQCPCCLFLPSGPASALLTL*QLEVRQ
Trigger: CTGCCTCACCTCCAGCTGTCAGAGGGTGAGCAGGGC...TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTCCCCGATCACCTCACTaGGCCTCTAGGAGGGAGATC +
Preference number: 4 (lower is better)
Translates to: DRLGRGGVDHAADQQDVAPRSPH*ASRREI
Trigger: GATCTCCCTCCTAGAGGCTCAGTGAGGTGATCGGGG...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCAAGAGCCGTCCCCTGCTaGAGCCAGGCTGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPRAVPC*SQADRV
Trigger: GACCCTGTCAGCCTGGCTGCAGCAGGGGACGGCTCT...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTAATGGGGCCAGCTTCTaGAGGATGTCCCCGAGCCGT +
Preference number: 4 (lower is better)
Translates to: DRLGRGGVDHAADQQDVANGASF*RMSPSR
Trigger: ACGGCTCGGGGACATCCTGCAGAAGCTGGCCCCATT...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCAAGCGCTGGGTCCACGTaGTCACCAGCCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: GCPWQCPCCLFLPSGPASSAGST*SPALRL
Trigger: GAGCCGTAGGGCTGGTGAGCACGTGGACCCAGCGCT...TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CACACTCAGTTTGCAGCTGGGGAGAGGGATGGTGCGGGGCAGCCGGCCGTCCTGCTGCTGCACCCGAACTaGCTTCGGTGGTCACCACAG +
Preference number: 4 (lower is better)
Translates to: HTQFAAGERDGAGQPAVLLLHPN*LRWSPQ
Trigger: CTGTGGTGACCACCGAAGGCAGTTCGGGTGCAGCAG...CAGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCTGCAAACTGAGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGACTGCTTGGCCCACTaGAGCTTCCACACATGCCCC +
Preference number: 4 (lower is better)
Translates to: DRLGRGGVDHAADQQDVADCLAH*SFHTCP
Trigger: GGGGCATGTGTGGAAGCTGCAGTGGGCCAAGCAGTC...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGAGGGTTTCCAGCCACTaGTGCTGCAGCTCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLRVSSH*CCSSAE
Trigger: CTCCGCAGAGCTGCAGCAGCAGTGGCTGGAAACCCT...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAAGCTCACGGAGCAGCTaGGCCCATAGGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGSSRSS*AHRDLK
Trigger: CTTCAGGTCCCTATGGGCGCAGCTGCTCCGTGAGCT...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGTGCTCTGGGCCACACTaGTGGGGCTGGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLCSGPH*WGWRPG
Trigger: GCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCA...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAACGTGCAGCTGGCACTaGAAACCGCAGGCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGTCSWH*KPQAVS
Trigger: CGACACAGCCTGCGGTTTGCAGTGCCAGCTGCACGT...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATCGCCTGGCTCCGTGCTaGGGTCTGGGGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDRLAPC*GLGLAG
Trigger: GCCGGCCAACCCCAGACCCCAGCACGGAGCCAGGCG...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTCGCCTGGCTCCGTGCTaGGGTCTGGGGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SCACHSVAGVSPSRASERRLAPC*GLGLAG
Trigger: GCCGGCCAACCCCAGACCCCAGCACGGAGCCAGGCG...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACAGCGGGCACAGGCGCCTaGCTCCGTGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATAGTGA*LRAGVW
Trigger: CCAGACCCCAGCACGGAGCCAGGCGCCTGTGCCCGC...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACTCACTGGGCTCAGGTaGAGGCTGGCCAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GCPWQCPCCLFLPSGPASLTGLR*RLARGF
Trigger: GAAGCCCCTGGCCAGCCTCCACCTGAGCCCAGTGAG...TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGCACTCAGCTCTCCCGTaGGGCCTATGTCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLHSALP*GLCLES
Trigger: GCTCTCCAGACATAGGCCCCACGGGAGAGCTGAGTG...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATACTGTCCGCCTCCTCCTaGGGGGTGACCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPILSASS*GVTFGT
Trigger: GGTCCCGAAGGTCACCCCCCAGGAGGAGGCGGACAG...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAAGCAGGAACTGCCCGTaGAAGCGGTGGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGSRNCP*KRWMEE
Trigger: CTCCTCCATCCACCGCTTCCACGGGCAGTTCCTGCT...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGCGGACGCTGAACTTCTaGCCCATGAGCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLRTLNF*PMSRSL
Trigger: CAAGCTGCGGCTCATGGGCCAGAAGTTCAGCGTCCG...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGCGTGATAGGCATGTCTaGAGAGAGGCTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWRDRHV*REAGVL
Trigger: GAGGACCCCAGCCTCTCTCCAGACATGCCTATCACG...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGGGCAGCCGGCCGTCCTaGCTGCCTCCCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQGSRPS*LPPCRC
Trigger: GCACCTGCAGGGAGGCAGCCAGGACGGCCGGCTGCC...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACAGGCAGCCGGCCGTCCTaGCTGCCTCCCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATGSRPS*LPPCRC
Trigger: GCACCTGCAGGGAGGCAGCCAGGACGGCCGGCTGCC...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGCACTCAGTTTGCAGCTaGGGAGAGGGATGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLHSVCS*GEGWCG
Trigger: CCCGCACCATCCCTCTCCCCAGCTGCAAACTGAGTG...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACAGCCCCCGGGCTGTCCTaGGCCGTGTCCCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATAPGLS*AVSPWA
Trigger: TGCCCATGGGGACACGGCCCAGGACAGCCCGGGGGC...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGGTGTGCAGGGCAGTaGGAGACTCAGCTCACGGAG +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGWCAGQ*ETQLTE
Trigger: CTCCGTGAGCTGAGTCTCCCACTGCCCTGCACACCA...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGAAGTGTCCTGAGCTCTaGGCTGTTGGCCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWKCPEL*AVGPPS
Trigger: TGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTT...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCTCTGGGCCACACTGCTaGGGCTGGAGGCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSSGPHC*GWRPGS
Trigger: AGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGA...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCGGATGTGGCTGTCCCTaGCAGTGCCCATGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTGCGCP*QCPCCL
Trigger: GAGGCAGCATGGGCACTGCCAGGGACAGCCACATCC...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGGGCAGAGGCGGGGTaGACCACGCTGCAGACCAGC +
Preference number: 4 (lower is better)
Translates to: LLWATLLGLEARLLAKTCWAEAG*TTLQTS
Trigger: GCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCA...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCACTGCTGCAGCCAGGCTaGCAGGGTCCCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRALLQPG*QGPHSG
Trigger: CCCACTGTGGGGACCCTGTCAGCCTGGCTGCAGCAG...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATCTGCTGCAGCCAGGCTaGCAGGGTCCCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYLLQPG*QGPHSG
Trigger: CCCACTGTGGGGACCCTGTCAGCCTGGCTGCAGCAG...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGTCCCACTCCTCCGTaGTCCGCGTCTTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRCPTPP*SASSAP
Trigger: CGGAGCTGAAGACGCGGATCACGGAGGAGTGGGACA...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATGGTCTCACCGCTCTCTaGCAGCCGCAGGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDGLTAL*QPQGAA
Trigger: TGCGGCCCCCTGCGGCTGTCAGAGAGCGGTGAGACC...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTCTCACCGCTCTCTaGCAGCCGCAGGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SCACHSVAGVSPSRASERGLTAL*QPQGAA
Trigger: TGCGGCCCCCTGCGGCTGTCAGAGAGCGGTGAGACC...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGTCCACAGCTCTCCACTaGTCAGGTGCTAGGCTCACA +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWSTALH*SGARLT
Trigger: TGTGAGCCTAGCACCTGATCAGTGGAGAGCTGTGGA...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR GCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAAGAGCCGTCCCCTGCTaGAGCCAGGCTGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPIRAVPC*SQADRV
Trigger: GACCCTGTCAGCCTGGCTGCAGCAGGGGACGGCTCT...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGAGAGCCGTCCCCTaGTGCAGCCAGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPIWRAVP*CSQADR
Trigger: CCTGTCAGCCTGGCTGCAGCAGGGGACGGCTCTCCA...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACTTCTGGGGGCCAGAGTaGTGGGCCAGGCCGGCATCC +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHFWGPE*WARPAS
Trigger: GGATGCCGGCCTGGCCCAGCACTCTGGCCCCCAGAA...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATACCGGGGGACCCTCTaGACGGGCTCCAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPIYRGTL*TGSSMW
Trigger: CCACATGCTGGAGCCCGTGCAGAGGGTCCCCCGGTA...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGGGCTTGACGATATCCTaGACCTGGAGGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWGLTIS*TWRPEM
Trigger: CATCTCAGGCCTCCAGGTGCAGGATATCGTCAAGCC...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCGGGCTCGAGCCCTGCTaGACCCGAACTGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: LLWATLLGLEARLLAKTCGLEPC*TRTAFG
Trigger: ACCGAAGGCAGTTCGGGTGCAGCAGGGCTCGAGCCC...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGTCCAGCCACTGCTGCTaGAGCTCTGCGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLSSHCC*SSAEEA
Trigger: CGCCTCCTCCGCAGAGCTGCAGCAGCAGTGGCTGGA...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAGAGACTGGGACCAGCCTCACCCGGCTTGCAAGGGTCACTAGAAGCCTGCAGGTCCAGCCACTGCTGCTaGAGCTCTGCGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: QRLGPASPGLQGSLEACRSSHCC*SSAEEA
Trigger: CGCCTCCTCCGCAGAGCTGCAGCAGCAGTGGCTGGA...CCTGCAGGCTTCTAGTGACCCTTGCAAGCCGGGTGAGGCTGGTCCCAGTCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGTCCAATGTGGTGGTGTaGAGGGCAGTGGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWSNVVV*RAVGDS
Trigger: TGAGTCTCCCACTGCCCTGCACACCACCACATTGGA...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTGCTCTGGGCCACACTaGTGGGGCTGGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLCSGPH*WGWRPG
Trigger: GCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCA...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATTGGCAGTCGGCCCCTaGTCTGGGCCACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPILAVGP*SGPHCW
Trigger: CCAGCAGTGTGGCCCAGAGCAGGGGCCGACTGCCAA...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCTTGGCAGTCGGCCCCTaGTCTGGGCCACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: WGLQHHLPGQHRSNVVVCLAVGP*SGPHCW
Trigger: CCAGCAGTGTGGCCCAGAGCAGGGGCCGACTGCCAA...GCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTCCCCTCAGGTGGGCCTCAAGGCCTGGACTTGAGGGCAGCTTCAATCCATGCCCTGCCTCCAGGGCCCTaGTCACCCTCTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPSGGPQGLDLRAASIHALPPGP*SPSDSW
Trigger: CCAGCTGTCAGAGGGTGAGCAGGGCCCTGGAGGCAG...GGCATGGATTGAAGCTGCCCTCAAGTCCAGGCCTTGAGGCCCACCTGAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCCGCCTGGCTCCGTGCTaGGGTCTGGGGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCRLAPC*GLGLAG
Trigger: GCCGGCCAACCCCAGACCCCAGCACGGAGCCAGGCG...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCGCGGGCACAGGCGCCTaGCTCCGTGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCAGTGA*LRAGVW
Trigger: CCAGACCCCAGCACGGAGCCAGGCGCCTGTGCCCGC...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGGCGGGCACAGGCGCCTaGCTCCGTGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLAGTGA*LRAGVW
Trigger: CCAGACCCCAGCACGGAGCCAGGCGCCTGTGCCCGC...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCCCCACAGTGGGCTCTaGGCCCAACAGGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVPHSGL*AQQGAP
Trigger: AGGCGCTCCCTGTTGGGCCCAGAGCCCACTGTGGGG...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCCGTGGGGCCTATGTCTaGAGAGCCGTCCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGRGAYV*RAVPCC
Trigger: GCAGCAGGGGACGGCTCTCCAGACATAGGCCCCACG...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGTCCCGCTGTCCCGGTTaGGGATCTTTAAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWSRCPG*GSLSYH
Trigger: GTGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGA...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGGCGCCCCCAGTACAGTaGGGCTTGGGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SQDSTGPMWWCAGQWETQAPPVQ*GLGQPP
Trigger: TGGAGGCTGGCCCAAGCCCCACTGTACTGGGGGCGC...CTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACGCGCCCCCAGTACAGTaGGGCTTGGGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHAPPVQ*GLGQPP
Trigger: TGGAGGCTGGCCCAAGCCCCACTGTACTGGGGGCGC...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGAGCGCCCCCAGTACAGTaGGGCTTGGGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGAPPVQ*GLGQPP
Trigger: TGGAGGCTGGCCCAAGCCCCACTGTACTGGGGGCGC...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCTGTCCGCCTCCTCCTaGGGGGTGACCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVLSASS*GVTFGT
Trigger: GGTCCCGAAGGTCACCCCCCAGGAGGAGGCGGACAG...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCACTGTCCGCCTCCTCCTaGGGGGTGACCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRALSASS*GVTFGT
Trigger: GGTCCCGAAGGTCACCCCCCAGGAGGAGGCGGACAG...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACTGTCCGCCTCCTCCTaGGGGGTGACCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGLSASS*GVTFGT
Trigger: GGTCCCGAAGGTCACCCCCCAGGAGGAGGCGGACAG...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TGCACAGAGACTGGGACCAGCCTCACCCGGCTTGCAAGGGTCACTAGAAGCCTGTGGGGGCCAGAGTGCTaGGCCAGGCCGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: CTETGTSLTRLARVTRSLWGPEC*ARPASL
Trigger: CAAGGATGCCGGCCTGGCCCAGCACTCTGGCCCCCA...CAGGCTTCTAGTGACCCTTGCAAGCCGGGTGAGGCTGGTCCCAGTCTCTGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGATGGGGGCCAGAGTGCTaGGCCAGGCCGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGWGPEC*ARPASL
Trigger: CAAGGATGCCGGCCTGGCCCAGCACTCTGGCCCCCA...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCATGTGGAGAAGCTTCTaGGGGCCAGAGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTMWRSF*GPECWA
Trigger: GGCCCAGCACTCTGGCCCCCAGAAGCTTCTCCACAT...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCAGCTCCTGGGCAATGTaGAGAAGCTTCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGSSWAM*RSFWGP
Trigger: TGGCCCCCAGAAGCTTCTCCACATTGCCCAGGAGCT...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAAGCTCCTGGGCAATGTaGAGAAGCTTCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGSSWAM*RSFWGP
Trigger: TGGCCCCCAGAAGCTTCTCCACATTGCCCAGGAGCT...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCCCGCATCCGTCAGCCTaGTGCAGAAAACCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGPHPSA*CRKPGP
Trigger: TGGACCAGGTTTTCTGCACCAGGCTGACGGATGCGG...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAGCCCATGATGACTTCTaGAGGGATCCCCGCATCCGT +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGAHDDF*RDPRIR
Trigger: ACGGATGCGGGGATCCCTCCAGAAGTCATCATGGGC...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACCGCATCCTTCCGGTCTaGGGCGTCCTGCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHRILPV*GVLREP
Trigger: AGGCTCCCGCAGGACGCCCCAGACCGGAAGGATGCG...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGACGCATCCTTCCGGTCTaGGGCGTCCTGCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGRILPV*GVLREP
Trigger: AGGCTCCCGCAGGACGCCCCAGACCGGAAGGATGCG...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTCTGGGGTCCTCATCCTaGCTGAAGGCGCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: DRLGRGGVDHAADQQDVALGSSS*LKAPPK
Trigger: TTTTGGTGGCGCCTTCAGCCAGGATGAGGACCCCAG...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGACTGGGGTCCTCATCCTaGCTGAAGGCGCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGLGSSS*LKAPPK
Trigger: TTTTGGTGGCGCCTTCAGCCAGGATGAGGACCCCAG...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCCGTGATAGGCATGTCTaGAGAGAGGCTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGRDRHV*REAGVL
Trigger: GAGGACCCCAGCCTCTCTCCAGACATGCCTATCACG...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGGCTCTCAGGGGCCACTaGCTGTGTCAGGAAACAATC +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWALRGH*LCQETI
Trigger: GATTGTTTCCTGACACAGCCAGTGGCCCCTGAGAGC...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTAGCTGGGGAGAGGGATaGTGCGGGGCAGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: SCACHSVAGVSPSRASERSWGEG*CGAAGR
Trigger: ACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCT...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATAGCTGGGGAGAGGGATaGTGCGGGGCAGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDSWGEG*CGAAGR
Trigger: ACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCT...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGGGTACCAGGACTGCTTaGCCCACTGCAGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLGTRTA*PTAAST
Trigger: TGTGGAAGCTGCAGTGGGCCAAGCAGTCCTGGTACC...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGCCCCCGGGCTGTCCTaGGCCGTGTCCCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRAPGLS*AVSPWA
Trigger: TGCCCATGGGGACACGGCCCAGGACAGCCCGGGGGC...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCTGGTGTGCAGGGCAGTaGGAGACTCAGCTCACGGAG +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTWCAGQ*ETQLTE
Trigger: CTCCGTGAGCTGAGTCTCCCACTGCCCTGCACACCA...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCAGCACAGGTCCAATGTaGTGGTGTGCAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGSTGPM*WCAGQW
Trigger: CCACTGCCCTGCACACCACCACATTGGACCTGTGCT...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCTGGCTGGTCCCGAGAAGCCAGCGTGCACACACGGGATCTTCCGAGTGTGTTCTCTGGGCCACACTGCTaGGGCTGGAGGCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PGWSREASVHTRDLPSVFSGPHC*GWRPGS
Trigger: AGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGA...GAACACACTCGGAAGATCCCGTGTGTGCACGCTGGCTTCTCGGGACCAGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGAAGTCGGCCCCTGCTCTaGGCCACACTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGSRPLL*ATLLGL
Trigger: CAGCCCCAGCAGTGTGGCCCAGAGCAGGGGCCGACT...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATTGGGCAGAGGCGGGGTaGACCACGCTGCAGACCAGC +
Preference number: 4 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYWAEAG*TTLQTS
Trigger: GCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCA...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCCCAACAGGGAGCGCCTaGAGCTTCCCTAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSPTGSA*SFPREE
Trigger: TTCCTCCCTAGGGAAGCTTCAGGCGCTCCCTGTTGG...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTCTGCTGCAGCCAGGCTaGCAGGGTCCCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SCACHSVAGVSPSRASERLLQPG*QGPHSG
Trigger: CCCACTGTGGGGACCCTGTCAGCCTGGCTGCAGCAG...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGCTGCTGCAGCCAGGCTaGCAGGGTCCCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQLLQPG*QGPHSG
Trigger: CCCACTGTGGGGACCCTGTCAGCCTGGCTGCAGCAG...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCTGGCGGCTGTGGAGATaGGCTCCAAGGACCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGWRLWR*APRTSP
Trigger: CGGAGAGGTCCTTGGAGCTCATCTCCACAGCCGCCA...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGGGATTTGGCCCTCCTTaGTCAGTTCATTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLGFGPP*SVHWPG
Trigger: ACCCGGCCAATGAACTGATCAAGGAGGGCCAAATCC...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCAGGTCCTCATCCTGGCTaGAGGCGCCACCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPGPHPG*RRHQKP
Trigger: AGGCTTTTGGTGGCGCCTTCAGCCAGGATGAGGACC...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCGGTCTCACCGCTCTCTaGCAGCCGCAGGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCGLTAL*QPQGAA
Trigger: TGCGGCCCCCTGCGGCTGTCAGAGAGCGGTGAGACC...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGCACCTGGGGATCTaGCATGGGGATGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVQHLGI*HGDGGP
Trigger: TGGGCCGCCATCCCCATGTCAGATCCCCAGGTGCTG...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGCAGCACCTGGGGATCTaGCATGGGGATGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRQHLGI*HGDGGP
Trigger: TGGGCCGCCATCCCCATGTCAGATCCCCAGGTGCTG...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAGGAGGTACTGTCTTCTaGAGGCGAGCGAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGGGTVF*RRASFS
Trigger: GGAGAAACTCGCTCGCCTTCAGAAGACAGTACCTCC...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416701.6
ENST00000468206.6
CDS-3UTR TCA 90 bp CTCCCCTCAGGTGGGCCTCAAGGCCTGGACTTGAGGGCAGCTTCAATCCATGCCGCCTGGGGGCCCCACTaGGACACACCCACATCTATC +
Preference number: 4 (lower is better)
Translates to: LPSGGPQGLDLRAASIHAAWGPH*DTPTSI
Trigger: GATAGATGTGGGTGTGTCTCAGTGGGGCCCCCAGGC...GGCATGGATTGAAGCTGCCCTCAAGTCCAGGCCTTGAGGCCCACCTGAGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTGGTCACCCCTGTTCTaGGGAGGCTGGGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLWSPLF*GGWGRA
Trigger: GGCCCTACCCCAGCCTCCTCAGAACAGGGGTGACCA...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAGGGTTGAGGACCCCCTaGCTGACTCCATCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGGLRTP*LTPSLK
Trigger: CTTTAAGGATGGAGTCAGGCAGGGGGTCCTCAACCC...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGTGGAGAGCCGTCCCCTaGTGCAGCCAGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRWRAVP*CSQADR
Trigger: CCTGTCAGCCTGGCTGCAGCAGGGGACGGCTCTCCA...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTGGAGAGCCGTCCCCTaGTGCAGCCAGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLWRAVP*CSQADR
Trigger: CCTGTCAGCCTGGCTGCAGCAGGGGACGGCTCTCCA...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCAGGGCCATCTCTGCGTaGGCCCCCAGTACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLRAISA*APSTVG
Trigger: CCCCACTGTACTGGGGGCGCACGCAGAGATGGCCCT...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACATTCTGGGGGCCAGAGTaGTGGGCCAGGCCGGCATCC +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATFWGPE*WARPAS
Trigger: GGATGCCGGCCTGGCCCAGCACTCTGGCCCCCAGAA...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGCATCCGTCAGCCTGGTaGAGAAAACCTGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLHPSAW*RKPGPA
Trigger: TGCTGGACCAGGTTTTCTGCACCAGGCTGACGGATG...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTCCTCTGTCCGCGTCTaGAGCTCCAGGGACCTTTTT +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGSSVRV*SSRDLF
Trigger: AAAAAGGTCCCTGGAGCTGCAGACGCGGACAGAGGA...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CACACTCAGTTTGCAGCTGGGGAGAGGGATGGTGCGGGGCAGCCGGCCGTCCTGTCCTCTGTCCGCGTCTaGAGCTCCAGGGACCTTTTT +
Preference number: 4 (lower is better)
Translates to: HTQFAAGERDGAGQPAVLSSVRV*SSRDLF
Trigger: AAAAAGGTCCCTGGAGCTGCAGACGCGGACAGAGGA...CAGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCTGCAAACTGAGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACTGCTGCACCCGAACTaGCTTCGGTGGTCACCACAG +
Preference number: 4 (lower is better)
Translates to: GCPWQCPCCLFLPSGPASLLHPN*LRWSPQ
Trigger: CTGTGGTGACCACCGAAGGCAGTTCGGGTGCAGCAG...TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGGGCTCGAGCCCTGCTaGACCCGAACTGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRAGLEPC*TRTAFG
Trigger: ACCGAAGGCAGTTCGGGTGCAGCAGGGCTCGAGCCC...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGTCTGGGCTCGAGCCCTaGTGCACCCGAACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLSGLEP*CTRTAF
Trigger: GAAGGCAGTTCGGGTGCAGCAGGGCTCGAGCCCAGA...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CACACTCAGTTTGCAGCTGGGGAGAGGGATGGTGCGGGGCAGCCGGCCGTCCTGTCAGGAAACAATCTCTaGAGACACGGCTCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: HTQFAAGERDGAGQPAVLSGNNL*RHGSAG
Trigger: GCCGGCAGAGCCGTGTCTGCAGAGATTGTTTCCTGA...CAGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCTGCAAACTGAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTCCAGCCACTGCTGCTaGAGCTCTGCGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQSSHCC*SSAEEA
Trigger: CGCCTCCTCCGCAGAGCTGCAGCAGCAGTGGCTGGA...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCCCCTTGGCCAGTGGTTaGCCCTCTCTGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGPLASG*PSLGLS
Trigger: ACTGAGGCCCAGAGAGGGGCAACCACTGGCCAAGGG...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTCCCCTCAGGTGGGCCTCAAGGCCTGGACTTGAGGGCAGCTTCAATCCATGCCCCCTTGGCCAGTGGTTaGCCCTCTCTGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LPSGGPQGLDLRAASIHAPLASG*PSLGLS
Trigger: ACTGAGGCCCAGAGAGGGGCAACCACTGGCCAAGGG...GGCATGGATTGAAGCTGCCCTCAAGTCCAGGCCTTGAGGCCCACCTGAGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACATGCTCTGGGCCACACTaGTGGGGCTGGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATCSGPH*WGWRPG
Trigger: GCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCA...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTTGGCAGTCGGCCCCTaGTCTGGGCCACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQLAVGP*SGPHCW
Trigger: CCAGCAGTGTGGCCCAGAGCAGGGGCCGACTGCCAA...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCAGGCTGTCCCTGGCAGTaGCCATGCTGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPGCPWQ*PCCLFL
Trigger: CAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATCGGGGTGGACCACGCTaGAGACCAGCAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYRGGPR*RPAGCG
Trigger: GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCG...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCCAGCCACAAATCTCATaGGCCTGCCACTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGQPQIS*ACHSVA
Trigger: AGCCACTGAGTGGCAGGCGCATGAGATTTGTGGCTG...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCGCGTCCTGGTGGCTGTaGATGCCGACCAGCTCTATG +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSASWWL*MPTSSM
Trigger: CATAGAGCTGGTCGGCATCCACAGCCACCAGGACGC...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR CCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCACTGGCAGCGTCCTGGTaGCTGTGGATGCCGACCAGC +
Preference number: 4 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRALAASW*LWMPTS
Trigger: GCTGGTCGGCATCCACAGCCACCAGGACGCTGCCAG...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR CCA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCTCACTGGGCTCAGGTaGAGGCTGGCCAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVLTGLR*RLARGF
Trigger: GAAGCCCCTGGCCAGCCTCCACCTGAGCCCAGTGAG...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGCCCCACAGTGGGCTCTaGGCCCAACAGGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWPHSGL*AQQGAP
Trigger: AGGCGCTCCCTGTTGGGCCCAGAGCCCACTGTGGGG...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGACAGGGTCCCCACAGTaGGCTCTGGGCCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: SQDSTGPMWWCAGQWETQTGSPQ*ALGPTG
Trigger: CCCTGTTGGGCCCAGAGCCCACTGTGGGGACCCTGT...CTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCCGTGGGGCCTATGTCTaGAGAGCCGTCCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLRGAYV*RAVPCC
Trigger: GCAGCAGGGGACGGCTCTCCAGACATAGGCCCCACG...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTCCCGCTGTCCCGGTTaGGGATCTTTAAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGSRCPG*GSLSYH
Trigger: GTGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGA...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCGCTGTCCCGGTTaGGGATCTTTAAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLSRCPG*GSLSYH
Trigger: GTGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGA...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACTGTCCGCCTCCTCCTaGGGGGTGACCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATLSASS*GVTFGT
Trigger: GGTCCCGAAGGTCACCCCCCAGGAGGAGGCGGACAG...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGTGGGGGCCAGAGTGCTaGGCCAGGCCGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWWGPEC*ARPASL
Trigger: CAAGGATGCCGGCCTGGCCCAGCACTCTGGCCCCCA...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCAATGTGGAGAAGCTTCTaGGGGCCAGAGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPMWRSF*GPECWA
Trigger: GGCCCAGCACTCTGGCCCCCAGAAGCTTCTCCACAT...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGGTGTGCAGGAGCTCCTaGGCAATGTGGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLVCRSS*AMWRSF
Trigger: GAAGCTTCTCCACATTGCCCAGGAGCTCCTGCACAC...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACTGGTGCAGAAAACCTaGTCCAGCAGGTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GCPWQCPCCLFLPSGPASLVQKT*SSRCSR
Trigger: GCGGCTGCACCTGCTGGACCAGGTTTTCTGCACCAG...TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCCTGGTGCAGAAAACCTaGTCCAGCAGGTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSLVQKT*SSRCSR
Trigger: GCGGCTGCACCTGCTGGACCAGGTTTTCTGCACCAG...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCAACAGTGGGGAGCGCTaGGTCCACGTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: LLWATLLGLEARLLAKTCNSGER*VHVLTS
Trigger: GCTGGTGAGCACGTGGACCCAGCGCTCCCCACTGTT...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGCGCATCCTTCCGGTCTaGGGCGTCCTGCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWRILPV*GVLREP
Trigger: AGGCTCCCGCAGGACGCCCCAGACCGGAAGGATGCG...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTATGGCAGCATTGGAGTaGTTGGCGGCTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: DRLGRGGVDHAADQQDVAMAALE*LAAVEM
Trigger: CATCTCCACAGCCGCCAACCACTCCAATGCTGCCAT...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAAAGAGGTGGCGGTCCTaGGGGGTGCCGTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPIKRWRS*GVPFLA
Trigger: AGCCAAGAACGGCACCCCCCAGGACCGCCACCTCTT...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATACCAGGGCGCTCTTCATaGGGCCTCCAACACCACCTC +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPIPGRSS*GLQHHL
Trigger: GAGGTGGTGTTGGAGGCCCCATGAAGAGCGCCCTGG...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGAGGAGGTCGCTCACAGTaGGCAGCAGGAGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGGGRSQ*AAGGWG
Trigger: ACCCCAGCCTCCTGCTGCCCACTGTGAGCGACCTCC...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375482.8
CDS-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGACCCCCTGCCAGAGCTaGACCCCTCAGACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQTPCQS*TPQTWA
Trigger: GGCCCAGGTCTGAGGGGTCCAGCTCTGGCAGGGGGT...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACCTGCCCTGGTTGCCTTaGGCAGGCAGGTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHLPWLP*AGRCAS
Trigger: AGAGGCACACCTGCCTGCTCAAGGCAACCAGGGCAG...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR TCA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCCCAACAGGGAGCGCCTaGAGCTTCCCTAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LLWATLLGLEARLLAKTCPTGSA*SFPREE
Trigger: TTCCTCCCTAGGGAAGCTTCAGGCGCTCCCTGTTGG...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CTCCCCTCAGGTGGGCCTCAAGGCCTGGACTTGAGGGCAGCTTCAATCCATGCCCCAACAGGGAGCGCCTaGAGCTTCCCTAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LPSGGPQGLDLRAASIHAPTGSA*SFPREE
Trigger: TTCCTCCCTAGGGAAGCTTCAGGCGCTCCCTGTTGG...GGCATGGATTGAAGCTGCCCTCAAGTCCAGGCCTTGAGGCCCACCTGAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp TCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGTGGCGGCTGTGGAGATaGGCTCCAAGGACCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SQDSTGPMWWCAGQWETQWRLWR*APRTSP
Trigger: CGGAGAGGTCCTTGGAGCTCATCTCCACAGCCGCCA...CTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGCGGCTGTGGAGATaGGCTCCAAGGACCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQWRLWR*APRTSP
Trigger: CGGAGAGGTCCTTGGAGCTCATCTCCACAGCCGCCA...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGCTGCACCTGGAGGCCTaGGATGTCCATCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLLHLEA*DVHLLP
Trigger: CGGGAGAAGATGGACATCTCAGGCCTCCAGGTGCAG...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCCTGCACCTGGAGGCCTaGGATGTCCATCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LLWATLLGLEARLLAKTCLHLEA*DVHLLP
Trigger: CGGGAGAAGATGGACATCTCAGGCCTCCAGGTGCAG...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTGCTGTGTTTGGCTTaGCGATATCCTGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: DRLGRGGVDHAADQQDVAVLCLA*RYPAPG
Trigger: TCCAGGTGCAGGATATCGTCAAGCCAAACACAGCAC...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGCGCCACCAAAAGCCTTaGAGGTTTCGCTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWRHQKP*RFRCSV
Trigger: AACAGAACAGCGAAACCTTCAAGGCTTTTGGTGGCG...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CCTCAGGGTCCGGCACACTCAGTTTGCAGCTGGGGAGAGGGATGGTGCGGGGCACCACACAGCTTGCAGTaGTGCCTCCTCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: PQGPAHSVCSWGEGWCGAPHSLQ*CLLLVM
Trigger: CATCACCAAGAGGAGGCATCACTGCAAGCTGTGTGG...TGCCCCGCACCATCCCTCTCCCCAGCTGCAAACTGAGTGTGCCGGACCCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp TGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCGGCTGTTCTCGGCCTTaGACTCGGAGCACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: WGLQHHLPGQHRSNVVVCGCSRP*TRSTSH
Trigger: GTGGGAAGTGCTCCGAGTTCAAGGCCGAGAACAGCC...GCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CTCCCCTCAGGTGGGCCTCAAGGCCTGGACTTGAGGGCAGCTTCAATCCATGCCGGCTGTTCTCGGCCTTaGACTCGGAGCACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LPSGGPQGLDLRAASIHAGCSRP*TRSTSH
Trigger: GTGGGAAGTGCTCCGAGTTCAAGGCCGAGAACAGCC...GGCATGGATTGAAGCTGCCCTCAAGTCCAGGCCTTGAGGCCCACCTGAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGCAGCACCTGGGGATCTaGCATGGGGATGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWQHLGI*HGDGGP
Trigger: TGGGCCGCCATCCCCATGTCAGATCCCCAGGTGCTG...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTAGAGCCGTCCCCTGCTaGAGCCAGGCTGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: SCACHSVAGVSPSRASERRAVPC*SQADRV
Trigger: GACCCTGTCAGCCTGGCTGCAGCAGGGGACGGCTCT...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATTGGAGAGCCGTCCCCTaGTGCAGCCAGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDWRAVP*CSQADR
Trigger: CCTGTCAGCCTGGCTGCAGCAGGGGACGGCTCTCCA...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCGTCCAGGGCCATCTCTaGGTGCGCCCCCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLVQGHL*VRPQYS
Trigger: ACTGTACTGGGGGCGCACGCAGAGATGGCCCTGGAC...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCCGGCAGCAGGAACTaGCCGTGGAAGCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLSGSRN*PWKRWM
Trigger: CATCCACCGCTTCCACGGGCAGTTCCTGCTGCCGGA...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGAGCGCTGGGTCCACGTaGTCACCAGCCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWSAGST*SPALRL
Trigger: GAGCCGTAGGGCTGGTGAGCACGTGGACCCAGCGCT...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCTCTTCCCCACCCAGCTaGTCGTACACCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSSSPPS*SYTSKS
Trigger: GCTCTTGGAGGTGTACGAGCAGCTGGGTGGGGAAGA...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATACTGCTGCACCCGAACTaGCTTCGGTGGTCACCACAG +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPILLHPN*LRWSPQ
Trigger: CTGTGGTGACCACCGAAGGCAGTTCGGGTGCAGCAG...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCCTGCTGCACCCGAACTaGCTTCGGTGGTCACCACAG +
Preference number: 4 (lower is better)
Translates to: LLWATLLGLEARLLAKTCLLHPN*LRWSPQ
Trigger: CTGTGGTGACCACCGAAGGCAGTTCGGGTGCAGCAG...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCCTGCTGCACCCGAACTaGCTTCGGTGGTCACCACAG +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGLLHPN*LRWSPQ
Trigger: CTGTGGTGACCACCGAAGGCAGTTCGGGTGCAGCAG...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATGGGCTCGAGCCCTGCTaGACCCGAACTGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDGLEPC*TRTAFG
Trigger: ACCGAAGGCAGTTCGGGTGCAGCAGGGCTCGAGCCC...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACTCTGGGCTCGAGCCCTaGTGCACCCGAACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHSGLEP*CTRTAF
Trigger: GAAGGCAGTTCGGGTGCAGCAGGGCTCGAGCCCAGA...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGTCTGGGCTCGAGCCCTaGTGCACCCGAACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SQDSTGPMWWCAGQWETQSGLEP*CTRTAF
Trigger: GAAGGCAGTTCGGGTGCAGCAGGGCTCGAGCCCAGA...CTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACTGCAGACACGGCTCTaGCGGCTGTTCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGLQTRL*RLFSAL
Trigger: CAAGGCCGAGAACAGCCGGCAGAGCCGTGTCTGCAG...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCACTCAGGTACCAGGACTaGTTGGCCCACTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPLRYQD*LAHCSF
Trigger: GAAGCTGCAGTGGGCCAAGCAGTCCTGGTACCTGAG...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCGTTTCCAGCCACTGCTaGTGCAGCTCTGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGVSSHC*CSSAEE
Trigger: CTCCTCCGCAGAGCTGCAGCAGCAGTGGCTGGAAAC...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GAGAAGCCAGCGTGCACACACGGGATCTTCCGAGTGTGTTCCCAGCCTGGGGGCCCCCATGGGCAGCAGTaGTTAGGGTTTCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: EKPACTHGIFRVCSQPGGPHGQQ*LGFPAT
Trigger: AGTGGCTGGAAACCCTAAGCACTGCTGCCCATGGGG...GCCCCCAGGCTGGGAACACACTCGGAAGATCCCGTGTGTGCACGCTGGCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGCTCACGGAGCAGCTaGGCCCATAGGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGSSRSS*AHRDLK
Trigger: CTTCAGGTCCCTATGGGCGCAGCTGCTCCGTGAGCT...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGAGCTCACGGAGCAGCTaGGCCCATAGGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLSSRSS*AHRDLK
Trigger: CTTCAGGTCCCTATGGGCGCAGCTGCTCCGTGAGCT...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACATTGGCAGTCGGCCCCTaGTCTGGGCCACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATLAVGP*SGPHCW
Trigger: CCAGCAGTGTGGCCCAGAGCAGGGGCCGACTGCCAA...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAGGCTGTCCCTGGCAGTaGCCATGCTGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPIGCPWQ*PCCLFL
Trigger: CAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAGAGACTGGGACCAGCCTCACCCGGCTTGCAAGGGTCACTAGAAGCCTGCAGGGGCTGTCCCTGGCAGTaGCCATGCTGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QRLGPASPGLQGSLEACRGCPWQ*PCCLFL
Trigger: CAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC...CCTGCAGGCTTCTAGTGACCCTTGCAAGCCGGGTGAGGCTGGTCCCAGTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATCGGGGTGGACCACGCTaGAGACCAGCAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDRGGPR*RPAGCG
Trigger: GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCG...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGCGGGGTGGACCACGCTaGAGACCAGCAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQRGGPR*RPAGCG
Trigger: GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCG...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCTGCCGACCAGCTCTATaGTGGAGCACCCCCACCACA +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGCRPAL*WSTPTT
Trigger: TGTGGTGGGGGTGCTCCACCATAGAGCTGGTCGGCA...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR CCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGAGGCAGGTGTGCCTCTaGGCAGGGCGTGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQRQVCL*AGRGAG
Trigger: GCCTGCGCCACGCCCTGCCCAGAGGCACACCTGCCT...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR CCA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCAGCGGGCACAGGCGCCTaGCTCCGTGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KHCVPLASGTATNLMRLPAGTGA*LRAGVW
Trigger: CCAGACCCCAGCACGGAGCCAGGCGCCTGTGCCCGC...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCCACTCAGCTCTCCCGTaGGGCCTATGTCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: WGLQHHLPGQHRSNVVVCHSALP*GLCLES
Trigger: GCTCTCCAGACATAGGCCCCACGGGAGAGCTGAGTG...GCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCATCTCTCCAGCCACACTaGAGGAGGGACTGTCGATCC +
Preference number: 4 (lower is better)
Translates to: GCPWQCPCCLFLPSGPASSLQPH*RRDCRS
Trigger: GGATCGACAGTCCCTCCTCCAGTGTGGCTGGAGAGA...TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCGCGCCCCCAGTACAGTaGGGCTTGGGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCAPPVQ*GLGQPP
Trigger: TGGAGGCTGGCCCAAGCCCCACTGTACTGGGGGCGC...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAGTGACCTTCGGGACCTaGCTGTCCAGGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPIVTFGT*LSRAIS
Trigger: AGAGATGGCCCTGGACAGCCAGGTCCCGAAGGTCAC...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTTCCTTGTCAGCCTTCTaGGGGGTGTTCTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: DRLGRGGVDHAADQQDVASLSAF*GVFSES
Trigger: TGACTCTGAGAACACCCCCCAGAAGGCTGACAAGGA...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCATGTGGAGAAGCTTCTaGGGGCCAGAGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGMWRSF*GPECWA
Trigger: GGCCCAGCACTCTGGCCCCCAGAAGCTTCTCCACAT...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCAGCTCCTGGGCAATGTaGAGAAGCTTCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSSSWAM*RSFWGP
Trigger: TGGCCCCCAGAAGCTTCTCCACATTGCCCAGGAGCT...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCCCGCATCCGTCAGCCTaGTGCAGAAAACCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRPHPSA*CRKPGP
Trigger: TGGACCAGGTTTTCTGCACCAGGCTGACGGATGCGG...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCGCCCATGATGACTTCTaGAGGGATCCCCGCATCCGT +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSAHDDF*RDPRIR
Trigger: ACGGATGCGGGGATCCCTCCAGAAGTCATCATGGGC...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCGATGTCCCCGAGCCGTaGGTTTGTGTCCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: WGLQHHLPGQHRSNVVVCDVPEP*VCVPLL
Trigger: GAGGAGTGGGACACAAACCCACGGCTCGGGGACATC...GCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAAACAGTGGGGAGCGCTaGGTCCACGTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRANSGER*VHVLTS
Trigger: GCTGGTGAGCACGTGGACCCAGCGCTCCCCACTGTT...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGAACAGTGGGGAGCGCTaGGTCCACGTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVNSGER*VHVLTS
Trigger: GCTGGTGAGCACGTGGACCCAGCGCTCCCCACTGTT...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTCATACCTCCTGCTTCTaGATGCTGTGGACGACGTCT +
Preference number: 4 (lower is better)
Translates to: DRLGRGGVDHAADQQDVAHTSCF*MLWTTS
Trigger: AGACGTCGTCCACAGCATCCAGAAGCAGGAGGTATG...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGACATACCTCCTGCTTCTaGATGCTGTGGACGACGTCT +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGHTSCF*MLWTTS
Trigger: AGACGTCGTCCACAGCATCCAGAAGCAGGAGGTATG...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCATGGCAGCATTGGAGTaGTTGGCGGCTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTMAALE*LAAVEM
Trigger: CATCTCCACAGCCGCCAACCACTCCAATGCTGCCAT...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGAAAGAGGTGGCGGTCCTaGGGGGTGCCGTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGKRWRS*GVPFLA
Trigger: AGCCAAGAACGGCACCCCCCAGGACCGCCACCTCTT...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGACGATATCCTGCACCTaGAGGCCTGAGATGTCCATC +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLTISCT*RPEMSI
Trigger: GATGGACATCTCAGGCCTCCAGGTGCAGGATATCGT...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAACGATATCCTGCACCTaGAGGCCTGAGATGTCCATC +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGTISCT*RPEMSI
Trigger: GATGGACATCTCAGGCCTCCAGGTGCAGGATATCGT...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCACTGGGGTCCTCATCCTaGCTGAAGGCGCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPLGSSS*LKAPPK
Trigger: TTTTGGTGGCGCCTTCAGCCAGGATGAGGACCCCAG...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGACCTGGGGATCTGACATaGGGATGGCGGCCCACACCT +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGPGDLT*GWRPTP
Trigger: AGGTGTGGGCCGCCATCCCCATGTCAGATCCCCAGG...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCCCTGGGGATCTGACATaGGGATGGCGGCCCACACCT +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLPGDLT*GWRPTP
Trigger: AGGTGTGGGCCGCCATCCCCATGTCAGATCCCCAGG...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACAGCTGGGGAGAGGGATaGTGCGGGGCAGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHSWGEG*CGAAGR
Trigger: ACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCT...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GAGAAGCCAGCGTGCACACACGGGATCTTCCGAGTGTGTTCCCAGCCTGGGGGCGGTACCAGGACTGCTTaGCCCACTGCAGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: EKPACTHGIFRVCSQPGGGTRTA*PTAAST
Trigger: TGTGGAAGCTGCAGTGGGCCAAGCAGTCCTGGTACC...GCCCCCAGGCTGGGAACACACTCGGAAGATCCCGTGTGTGCACGCTGGCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGTGGTGTGCAGGGCAGTaGGAGACTCAGCTCACGGAG +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLWCAGQ*ETQLTE
Trigger: CTCCGTGAGCTGAGTCTCCCACTGCCCTGCACACCA...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCAACAGGTCCAATGTGGTaGTGTGCAGGGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPTGPMW*CAGQWE
Trigger: CTCCCACTGCCCTGCACACCACCACATTGGACCTGT...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCAGGGCGCTCTTCATaGGGCCTCCAACACCACCTC +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGPGRSS*GLQHHL
Trigger: GAGGTGGTGTTGGAGGCCCCATGAAGAGCGCCCTGG...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGACCAGGGCGCTCTTCATaGGGCCTCCAACACCACCTC +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGPGRSS*GLQHHL
Trigger: GAGGTGGTGTTGGAGGCCCCATGAAGAGCGCCCTGG...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACATCTGGGCCACACTGCTaGGGCTGGAGGCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATSGPHC*GWRPGS
Trigger: AGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGA...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGACCAACAGGGAGCGCCTaGAGCTTCCCTAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGPTGSA*SFPREE
Trigger: TTCCTCCCTAGGGAAGCTTCAGGCGCTCCCTGTTGG...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGCTGCTGCAGCCAGGCTaGCAGGGTCCCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQLLQPG*QGPHSG
Trigger: CCCACTGTGGGGACCCTGTCAGCCTGGCTGCAGCAG...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTTGTCCCACTCCTCCGTaGTCCGCGTCTTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: SCACHSVAGVSPSRASERCPTPP*SASSAP
Trigger: CGGAGCTGAAGACGCGGATCACGGAGGAGTGGGACA...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCAGGATTTGGCCCTCCTTaGTCAGTTCATTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPGFGPP*SVHWPG
Trigger: ACCCGGCCAATGAACTGATCAAGGAGGGCCAAATCC...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCGGTGCCGTTCTTGGCTaGCAGTTTCTGGATTTGGCC +
Preference number: 4 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRGAVLG*QFLDLA
Trigger: GGCCAAATCCAGAAACTGTCAGCCAAGAACGGCACC...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCGGTGCCGTTCTTGGCTaGCAGTTTCTGGATTTGGCC +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSGAVLG*QFLDLA
Trigger: GGCCAAATCCAGAAACTGTCAGCCAAGAACGGCACC...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGAAAGGATCATGCTGTTaGACAGGAAGAGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLKGSCC*TGRGGG
Trigger: ACCGCCACCTCTTCCTGTTCAACAGCATGATCCTTT...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGCTGCACCTGGAGGCCTaGGATGTCCATCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQLHLEA*DVHLLP
Trigger: CGGGAGAAGATGGACATCTCAGGCCTCCAGGTGCAG...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGCTGCACCTGGAGGCCTaGGATGTCCATCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRLHLEA*DVHLLP
Trigger: CGGGAGAAGATGGACATCTCAGGCCTCCAGGTGCAG...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCAGGTCTCACCGCTCTCTaGCAGCCGCAGGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: KHCVPLASGTATNLMRLPGLTAL*QPQGAA
Trigger: TGCGGCCCCCTGCGGCTGTCAGAGAGCGGTGAGACC...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCGCGCCCATAGGGACCTaGAGCTGCAGGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRAPIGT*SCRAPG
Trigger: CCCGGGGGCCCTGCAGCTTCAGGTCCCTATGGGCGC...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAGCGCCCATAGGGACCTaGAGCTGCAGGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: HSVAGVSPSRASERGYLGAPIGT*SCRAPG
Trigger: CCCGGGGGCCCTGCAGCTTCAGGTCCCTATGGGCGC...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GTGCGTGCACACACAGCACACACACACACACCACACACACAGGCCCTCCCTCTGCAAAGCCAAGTGTCCTaGGCTCTGGGCTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: VRAHTAHTHTPHTQALPLQSQVS*ALGCWP
Trigger: GGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTG...CAGAGGGAGGGCCTGTGTGTGTGGTGTGTGTGTGTGTGCTGTGTGTGCACGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGCAAAGCCAAGTGTCCTaGGCTCTGGGCTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQQSQVS*ALGCWP
Trigger: GGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTG...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTGGAGAGCCGTCCCCTaGTGCAGCCAGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCWRAVP*CSQADR
Trigger: CCTGTCAGCCTGGCTGCAGCAGGGGACGGCTCTCCA...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGGTCCAGGGCCATCTCTaGGTGCGCCCCCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQVQGHL*VRPQYS
Trigger: ACTGTACTGGGGGCGCACGCAGAGATGGCCCTGGAC...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTTTCTGGGGGCCAGAGTaGTGGGCCAGGCCGGCATCC +
Preference number: 4 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSFWGPE*WARPAS
Trigger: GGATGCCGGCCTGGCCCAGCACTCTGGCCCCCAGAA...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAAGCGCTGGGTCCACGTaGTCACCAGCCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRSAGST*SPALRL
Trigger: GAGCCGTAGGGCTGGTGAGCACGTGGACCCAGCGCT...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTACCGGGGGACCCTCTaGACGGGCTCCAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCYRGTL*TGSSMW
Trigger: CCACATGCTGGAGCCCGTGCAGAGGGTCCCCCGGTA...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCAGGCTTGACGATATCCTaGACCTGGAGGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPGLTIS*TWRPEM
Trigger: CATCTCAGGCCTCCAGGTGCAGGATATCGTCAAGCC...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCTCGCTGTTCTGTTTGTaGTTCTCGATGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTSLFCL*FSMVAW
Trigger: CCAGGCCACCATCGAGAAGCACAAACAGAACAGCGA...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCGGGCTCGAGCCCTGCTaGACCCGAACTGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCGLEPC*TRTAFG
Trigger: ACCGAAGGCAGTTCGGGTGCAGCAGGGCTCGAGCCC...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGGCTCGAGCCCTGCTaGACCCGAACTGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRGLEPC*TRTAFG
Trigger: ACCGAAGGCAGTTCGGGTGCAGCAGGGCTCGAGCCC...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGCAGCTCTTACAGCTCTaGTTCTCCTTGTCACGTCTG +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLQLLQL*FSLSRL
Trigger: CAGACGTGACAAGGAGAAGCAGAGCTGTAAGAGCTG...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTCTGCAGACACGGCTCTaGCGGCTGTTCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SCACHSVAGVSPSRASERLQTRL*RLFSAL
Trigger: CAAGGCCGAGAACAGCCGGCAGAGCCGTGTCTGCAG...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCTCAGGAAACAATCTCTaGAGACACGGCTCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSSGNNL*RHGSAG
Trigger: GCCGGCAGAGCCGTGTCTGCAGAGATTGTTTCCTGA...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGCTGGGCTGGGGGTCTaGAGTGGGTGTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRAAGLGV*SGCLLC
Trigger: ACAGAGAAGACACCCACTGCAGACCCCCAGCCCAGC...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000468206.6
CDS-3UTR GCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGAGCTGGGCTGGGGGTCTaGAGTGGGTGTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGAGLGV*SGCLLC
Trigger: ACAGAGAAGACACCCACTGCAGACCCCCAGCCCAGC...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000468206.6
CDS-3UTR GCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGCAGCTTCCACACATaGCCCGAGTCCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQCSFHT*PESSLS
Trigger: GGAGAGGCTGGACTCGGGGCATGTGTGGAAGCTGCA...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GTGCGTGCACACACAGCACACACACACACACCACACACACAGGCCCTCCCTCTGTGCAGCTTCCACACATaGCCCGAGTCCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VRAHTAHTHTPHTQALPLCSFHT*PESSLS
Trigger: GGAGAGGCTGGACTCGGGGCATGTGTGGAAGCTGCA...CAGAGGGAGGGCCTGTGTGTGTGGTGTGTGTGTGTGTGCTGTGTGTGCACGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGGACTGCTTGGCCCACTaGAGCTTCCACACATGCCCC +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQDCLAH*SFHTCP
Trigger: GGGGCATGTGTGGAAGCTGCAGTGGGCCAAGCAGTC...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGACTGCTTGGCCCACTaGAGCTTCCACACATGCCCC +
Preference number: 4 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYDCLAH*SFHTCP
Trigger: GGGGCATGTGTGGAAGCTGCAGTGGGCCAAGCAGTC...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGGTTTCCAGCCACTGCTaGTGCAGCTCTGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SQDSTGPMWWCAGQWETQVSSHC*CSSAEE
Trigger: CTCCTCCGCAGAGCTGCAGCAGCAGTGGCTGGAAAC...CTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGAGGGTTTCCAGCCACTaGTGCTGCAGCTCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: SQDSTGPMWWCAGQWETQRVSSH*CCSSAE
Trigger: CTCCGCAGAGCTGCAGCAGCAGTGGCTGGAAACCCT...CTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAAGGGTTTCCAGCCACTaGTGCTGCAGCTCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRARVSSH*CCSSAE
Trigger: CTCCGCAGAGCTGCAGCAGCAGTGGCTGGAAACCCT...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGAGCTCACGGAGCAGCTaGGCCCATAGGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQSSRSS*AHRDLK
Trigger: CTTCAGGTCCCTATGGGCGCAGCTGCTCCGTGAGCT...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTCCAATGTGGTGGTGTaGAGGGCAGTGGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRSNVVV*RAVGDS
Trigger: TGAGTCTCCCACTGCCCTGCACACCACCACATTGGA...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGCTGTCCCTGGCAGTaGCCATGCTGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYGCPWQ*PCCLFL
Trigger: CAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCCAAATCTCATGCGCCTaGCACTCAGTGGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRQISCA*HSVAGV
Trigger: TACCCCAGCCACTGAGTGGCAGGCGCATGAGATTTG...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCCAGCCACAAATCTCATaGGCCTGCCACTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSQPQIS*ACHSVA
Trigger: AGCCACTGAGTGGCAGGCGCATGAGATTTGTGGCTG...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGCTAGAAGGTGCAACTTaGAGGGTGGCGGGGGCAATG +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLLEGAT*RVAGAM
Trigger: CATTGCCCCCGCCACCCTGCAAGTTGCACCTTCTAG...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR GCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGGAGCACCCACCTCTGTaGTCTCAGGGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQEHPPL*SQGPLA
Trigger: AGCCAGTGGCCCCTGAGAGCACAGAGGTGGGTGCTC...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGCCCGAGAAGCCAGCGTaGACACACGGGATCTTCCGA +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRPEKPA*THGIFR
Trigger: TCGGAAGATCCCGTGTGTGCACGCTGGCTTCTCGGG...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGCTCTGGCAGCGTCCTaGTGGCTGTGGATGCCGACC +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRALAAS*WLWMPT
Trigger: GGTCGGCATCCACAGCCACCAGGACGCTGCCAGAGC...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR CCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCGGCGTGGCGCAGGCCTaGGCTCTGGCAGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRGVAQA*ALAASW
Trigger: CCAGGACGCTGCCAGAGCCCAGGCCTGCGCCACGCC...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR CCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGCACTCAGCTCTCCCGTaGGGCCTATGTCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQHSALP*GLCLES
Trigger: GCTCTCCAGACATAGGCCCCACGGGAGAGCTGAGTG...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCACACTCAGCTCTCCCGTaGGGCCTATGTCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRAHSALP*GLCLES
Trigger: GCTCTCCAGACATAGGCCCCACGGGAGAGCTGAGTG...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATCTCTCCAGCCACACTaGAGGAGGGACTGTCGATCC +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPISLQPH*RRDCRS
Trigger: GGATCGACAGTCCCTCCTCCAGTGTGGCTGGAGAGA...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGACCTTCGGGACCTaGCTGTCCAGGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRAVTFGT*LSRAIS
Trigger: AGAGATGGCCCTGGACAGCCAGGTCCCGAAGGTCAC...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCTCCTTGTCAGCCTTCTaGGGGGTGTTCTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTSLSAF*GVFSES
Trigger: TGACTCTGAGAACACCCCCCAGAAGGCTGACAAGGA...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGCTGGTGCAGAAAACCTaGTCCAGCAGGTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQLVQKT*SSRCSR
Trigger: GCGGCTGCACCTGCTGGACCAGGTTTTCTGCACCAG...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGAGCAGGAACTGCCCGTaGAAGCGGTGGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQSRNCP*KRWMEE
Trigger: CTCCTCCATCCACCGCTTCCACGGGCAGTTCCTGCT...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGGATGTCCCCGAGCCGTaGGTTTGTGTCCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQDVPEP*VCVPLL
Trigger: GAGGAGTGGGACACAAACCCACGGCTCGGGGACATC...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGATGTCCCCGAGCCGTaGGTTTGTGTCCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRDVPEP*VCVPLL
Trigger: GAGGAGTGGGACACAAACCCACGGCTCGGGGACATC...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGGATGTCCCCGAGCCGTaGGTTTGTGTCCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVDVPEP*VCVPLL
Trigger: GAGGAGTGGGACACAAACCCACGGCTCGGGGACATC...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTGTGGAGACATGGCCAAGATCTGCACAGAGACTGGGACCAGCCTCACCCGGCCTGGGGTCCTCATCCTaGCTGAAGGCGCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: AVETWPRSAQRLGPASPGLGSSS*LKAPPK
Trigger: TTTTGGTGGCGCCTTCAGCCAGGATGAGGACCCCAG...GCCGGGTGAGGCTGGTCCCAGTCTCTGTGCAGATCTTGGCCATGTCTCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp TGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCGCTGGGGGTCTGCAGTaGGTGTCTTCTCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: WGLQHHLPGQHRSNVVVCAGGLQ*VSSLCS
Trigger: AGAGCACAGAGAAGACACCCACTGCAGACCCCCAGC...GCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGCCTGGGGATCTGACATaGGGATGGCGGCCCACACCT +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWPGDLT*GWRPTP
Trigger: AGGTGTGGGCCGCCATCCCCATGTCAGATCCCCAGG...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGCACTCAGTTTGCAGCTaGGGAGAGGGATGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQHSVCS*GEGWCG
Trigger: CCCGCACCATCCCTCTCCCCAGCTGCAAACTGAGTG...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCCCCCGGGCTGTCCTaGGCCGTGTCCCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQAPGLS*AVSPWA
Trigger: TGCCCATGGGGACACGGCCCAGGACAGCCCGGGGGC...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCACAGGTCCAATGTGGTaGTGTGCAGGGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLWATLLGLEARLLAKTCTGPMW*CAGQWE
Trigger: CTCCCACTGCCCTGCACACCACCACATTGGACCTGT...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGTCTGGGCCACACTGCTaGGGCTGGAGGCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLSGPHC*GWRPGS
Trigger: AGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGA...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTAGTCGGCCCCTGCTCTaGGCCACACTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSSRPLL*ATLLGL
Trigger: CAGCCCCAGCAGTGTGGCCCAGAGCAGGGGCCGACT...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGACCACACGGCCCATATaGATGATGGTTACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWTTRPI*MMVTLA
Trigger: TGCCAAAGTAACCATCATCCATATGGGCCGTGTGGT...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGGGATGTGGCTGTCCCTaGCAGTGCCCATGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQGCGCP*QCPCCL
Trigger: GAGGCAGCATGGGCACTGCCAGGGACAGCCACATCC...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGCCAACAGGGAGCGCCTaGAGCTTCCCTAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQPTGSA*SFPREE
Trigger: TTCCTCCCTAGGGAAGCTTCAGGCGCTCCCTGTTGG...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACAGGCTGTTCTCGGCCTTaGACTCGGAGCACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATGCSRP*TRSTSH
Trigger: GTGGGAAGTGCTCCGAGTTCAAGGCCGAGAACAGCC...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCACACGGCCCATATGGATaGTGGTTACTTTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPHGPYG*WLLWQS
Trigger: CGACTGCCAAAGTAACCATCATCCATATGGGCCGTG...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GCTGTTGGCCCACCCTCAGCAGTCCAGGGCGCTCTTCATGGGGCCTCCAACACCGTTTCTCCTCTGGGCTaGACTTCGTGCAATAGCGAA +
Preference number: 4 (lower is better)
Translates to: AVGPPSAVQGALHGASNTVSPLG*TSCNSE
Trigger: TTCGCTATTGCACGAAGTTCAGCCCAGAGGAGAAAC...GGTGTTGGAGGCCCCATGAAGAGCGCCCTGGACTGCTGAGGGTGGGCCAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR TCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGTGCCCTCCAACCAGGTaGCCAGGAGTGACACTTGTT +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLCPPTR*PGVTLV
Trigger: AACAAGTGTCACTCCTGGTCACCTGGTTGGAGGGCA...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp CCTGGCTGGTCCCGAGAAGCCAGCGTGCACACACGGGATCTTCCGAGTGTGTTCCTCAAGGCCTGGACTTaGGGGCAGCTTCAATCCATG +
Preference number: 4 (lower is better)
Translates to: PGWSREASVHTRDLPSVFLKAWT*GQLQSM
Trigger: CATGGATTGAAGCTGCCCTCAAGTCCAGGCCTTGAG...GAACACACTCGGAAGATCCCGTGTGTGCACGCTGGCTTCTCGGGACCAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGCCTGGTGGCTGTGGATaGCGACCAGCTCTATGGTGG +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWPGGCG*RPALWW
Trigger: CCACCATAGAGCTGGTCGGCATCCACAGCCACCAGG...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR GCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGAGAGCCGTCCCCTGCTaGAGCCAGGCTGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQRAVPC*SQADRV
Trigger: GACCCTGTCAGCCTGGCTGCAGCAGGGGACGGCTCT...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACAGGGCCATCTCTGCGTaGGCCCCCAGTACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHRAISA*APSTVG
Trigger: CCCCACTGTACTGGGGGCGCACGCAGAGATGGCCCT...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGCATCCGTCAGCCTGGTaGAGAAAACCTGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLHPSAW*RKPGPA
Trigger: TGCTGGACCAGGTTTTCTGCACCAGGCTGACGGATG...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACAAATGGGGCCAGCTTCTaGAGGATGTCCCCGAGCCGT +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATNGASF*RMSPSR
Trigger: ACGGCTCGGGGACATCCTGCAGAAGCTGGCCCCATT...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGAGCGCTGGGTCCACGTaGTCACCAGCCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQSAGST*SPALRL
Trigger: GAGCCGTAGGGCTGGTGAGCACGTGGACCCAGCGCT...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTGTGGAGACATGGCCAAGATCTGCACAGAGACTGGGACCAGCCTCACCCGGCGGCTTGACGATATCCTaGACCTGGAGGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: AVETWPRSAQRLGPASPGGLTIS*TWRPEM
Trigger: CATCTCAGGCCTCCAGGTGCAGGATATCGTCAAGCC...GCCGGGTGAGGCTGGTCCCAGTCTCTGTGCAGATCTTGGCCATGTCTCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTCGCTGTTCTGTTTGTaGTTCTCGATGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRSLFCL*FSMVAW
Trigger: CCAGGCCACCATCGAGAAGCACAAACAGAACAGCGA...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCTCGAGCCCTaGTGCACCCGAACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCSGLEP*CTRTAF
Trigger: GAAGGCAGTTCGGGTGCAGCAGGGCTCGAGCCCAGA...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCATGGGTGTCTTCTCTGTaGTCTCAGGGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRAWVSSL*SQGPLA
Trigger: AGCCAGTGGCCCCTGAGAGCACAGAGAAGACACCCA...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000468206.6
CDS-3UTR GCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGTGGGGAGAGGGATGGTaGGGGGCAGCCGGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGWGEGW*GAAGRP
Trigger: AGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCCA...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCTGGGGAGAGGGATGGTaGGGGGCAGCCGGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRWGEGW*GAAGRP
Trigger: AGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCCA...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGTGCAGCTTCCACACATaGCCCGAGTCCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWCSFHT*PESSLS
Trigger: GGAGAGGCTGGACTCGGGGCATGTGTGGAAGCTGCA...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGCTCAGGTACCAGGACTaGTTGGCCCACTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRLRYQD*LAHCSF
Trigger: GAAGCTGCAGTGGGCCAAGCAGTCCTGGTACCTGAG...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TGCGTGCACACACAGCACACACACACACACCACACACACAGGCCCTCCCTCTGTGTTTCCAGCCACTGCTaGTGCAGCTCTGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CVHTQHTHTHHTHRPSLCVSSHC*CSSAEE
Trigger: CTCCTCCGCAGAGCTGCAGCAGCAGTGGCTGGAAAC...ACAGAGGGAGGGCCTGTGTGTGTGGTGTGTGTGTGTGTGCTGTGTGTGCACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGCCCCATGGGCAGCAGTaGTTAGGGTTTCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRPHGQQ*LGFPAT
Trigger: AGTGGCTGGAAACCCTAAGCACTGCTGCCCATGGGG...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCTCCAATGTGGTGGTGTaGAGGGCAGTGGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGSNVVV*RAVGDS
Trigger: TGAGTCTCCCACTGCCCTGCACACCACCACATTGGA...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AACCGCAGGCTGTGTCGAGTGGAGAGAAAGGGCGATGTGCTTTTCTGGAAACTCTGCTCTGGGCCACACTaGTGGGGCTGGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: NRRLCRVERKGDVLFWKLCSGPH*WGWRPG
Trigger: GCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCA...GAGTTTCCAGAAAAGCACATCGCCCTTTCTCTCCACTCGACACAGCCTGCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCGGCAAACTCGATACTTaGCGGAGCCGCTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLGKLDT*RSRFQR
Trigger: CCTCTGGAAGCGGCTCCGGCAAGTATCGAGTTTGCC...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375482.8
CDS-3UTR GCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGAGTATCAGATGGGGTTTaGAGGCTGGGCCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGVSDGV*RLGPPR
Trigger: CCTTGGAGGGCCCAGCCTGCAAACCCCATCTGATAC...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGGACATGGCCAAGATCTaGACAGAGACTGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLDMAKI*TETGTS
Trigger: GCTGGTCCCAGTCTCTGTGCAGATCTTGGCCATGTC...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGCTCACTGGGCTCAGGTaGAGGCTGGCCAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQLTGLR*RLARGF
Trigger: GAAGCCCCTGGCCAGCCTCCACCTGAGCCCAGTGAG...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGCGTGGGGCCTATGTCTaGAGAGCCGTCCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQRGAYV*RAVPCC
Trigger: GCAGCAGGGGACGGCTCTCCAGACATAGGCCCCACG...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TGCACAGAGACTGGGACCAGCCTCACCCGGCTTGCAAGGGTCACTAGAAGCCTGAGCTCCTGGGCAATGTaGAGAAGCTTCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CTETGTSLTRLARVTRSLSSWAM*RSFWGP
Trigger: TGGCCCCCAGAAGCTTCTCCACATTGCCCAGGAGCT...CAGGCTTCTAGTGACCCTTGCAAGCCGGGTGAGGCTGGTCCCAGTCTCTGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGGTGTGCAGGAGCTCCTaGGCAATGTGGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLVCRSS*AMWRSF
Trigger: GAAGCTTCTCCACATTGCCCAGGAGCTCCTGCACAC...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAGTGTGCAGGAGCTCCTaGGCAATGTGGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPIVCRSS*AMWRSF
Trigger: GAAGCTTCTCCACATTGCCCAGGAGCTCCTGCACAC...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATCCGCATCCGTCAGCCTaGTGCAGAAAACCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYPHPSA*CRKPGP
Trigger: TGGACCAGGTTTTCTGCACCAGGCTGACGGATGCGG...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGCCGCATCCGTCAGCCTaGTGCAGAAAACCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SQDSTGPMWWCAGQWETQPHPSA*CRKPGP
Trigger: TGGACCAGGTTTTCTGCACCAGGCTGACGGATGCGG...CTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACGCCCATGATGACTTCTaGAGGGATCCCCGCATCCGT +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHAHDDF*RDPRIR
Trigger: ACGGATGCGGGGATCCCTCCAGAAGTCATCATGGGC...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCGCCCATGATGACTTCTaGAGGGATCCCCGCATCCGT +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLAHDDF*RDPRIR
Trigger: ACGGATGCGGGGATCCCTCCAGAAGTCATCATGGGC...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGTCCCCGAGCCGTaGGTTTGTGTCCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDDVPEP*VCVPLL
Trigger: GAGGAGTGGGACACAAACCCACGGCTCGGGGACATC...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCACATACCTCCTGCTTCTaGATGCTGTGGACGACGTCT +
Preference number: 4 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPHTSCF*MLWTTS
Trigger: AGACGTCGTCCACAGCATCCAGAAGCAGGAGGTATG...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTTGGCTGACAGTTTCTaGATTTGGCCCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGLADSF*IWPSLI
Trigger: GATCAAGGAGGGCCAAATCCAGAAACTGTCAGCCAA...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCACGTGATAGGCATGTCTaGAGAGAGGCTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRARDRHV*REAGVL
Trigger: GAGGACCCCAGCCTCTCTCCAGACATGCCTATCACG...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATGCAGGTGCAGCACCTaGGGATCTGACATGGGGATG +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGCRCST*GSDMGM
Trigger: CATCCCCATGTCAGATCCCCAGGTGCTGCACCTGCA...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACTGCAGGTGCAGCACCTaGGGATCTGACATGGGGATG +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHCRCST*GSDMGM
Trigger: CATCCCCATGTCAGATCCCCAGGTGCTGCACCTGCA...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGAGCTGGGGAGAGGGATaGTGCGGGGCAGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQSWGEG*CGAAGR
Trigger: ACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCT...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATCACTCAGTTTGCAGCTaGGGAGAGGGATGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDHSVCS*GEGWCG
Trigger: CCCGCACCATCCCTCTCCCCAGCTGCAAACTGAGTG...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACACTCAGTTTGCAGCTaGGGAGAGGGATGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATHSVCS*GEGWCG
Trigger: CCCGCACCATCCCTCTCCCCAGCTGCAAACTGAGTG...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGTGGGCCGTGTCCCCATaGGCAGCAGTGCTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQWAVSP*AAVLRV
Trigger: AACCCTAAGCACTGCTGCCCATGGGGACACGGCCCA...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGTGGTGTGCAGGGCAGTaGGAGACTCAGCTCACGGAG +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWWCAGQ*ETQLTE
Trigger: CTCCGTGAGCTGAGTCTCCCACTGCCCTGCACACCA...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGACAGGTCCAATGTGGTaGTGTGCAGGGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQTGPMW*CAGQWE
Trigger: CTCCCACTGCCCTGCACACCACCACATTGGACCTGT...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTGCGTGCACACACAGCACACACACACACACCACACACACAGGCCCTCCCTCTGAGCACAGGTCCAATGTaGTGGTGTGCAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VRAHTAHTHTPHTQALPLSTGPM*WCAGQW
Trigger: CCACTGCCCTGCACACCACCACATTGGACCTGTGCT...CAGAGGGAGGGCCTGTGTGTGTGGTGTGTGTGTGTGTGCTGTGTGTGCACGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGAAGCACAGGTCCAATGTaGTGGTGTGCAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGSTGPM*WCAGQW
Trigger: CCACTGCCCTGCACACCACCACATTGGACCTGTGCT...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGAAAGTGTCCTGAGCTCTaGGCTGTTGGCCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGKCPEL*AVGPPS
Trigger: TGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTT...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGACCACACGGCCCATATaGATGATGGTTACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLTTRPI*MMVTLA
Trigger: TGCCAAAGTAACCATCATCCATATGGGCCGTGTGGT...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTTGGGCAGAGGCGGGGTaGACCACGCTGCAGACCAGC +
Preference number: 4 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQAWAEAG*TTLQTS
Trigger: GCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCA...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGAGCAGGCTGTGTCGAGTaGAGAGAAAGGGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGAGCVE*RERAMC
Trigger: GCACATCGCCCTTTCTCTCCACTCGACACAGCCTGC...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGCACCTTACAGGGCCCTaGAGGCCCGTGCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQHLTGP*RPVPQG
Trigger: TCCTTGGGGCACGGGCCTCCAGGGCCCTGTAAGGTG...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGATGGGGTTTGCAGGCTaGGCCCTCCAAGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQMGFAG*ALQGEG
Trigger: GCCCTCCCCTTGGAGGGCCCAGCCTGCAAACCCCAT...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CAA 72 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTaGGCAGTCGGCCCCTGCTCTGGGCCACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVT*AVGPCSGPHCW
Trigger: CCAGCAGTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAGGTAGATGGTTTCCTTaGAAATCTCTTCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGGRWFP*KSLPCP
Trigger: TGGGCAAGGAAGAGATTTTCAAGGAAACCATCTACC...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACTGTCCCACTCCTCCGTaGTCCGCGTCTTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHCPTPP*SASSAP
Trigger: CGGAGCTGAAGACGCGGATCACGGAGGAGTGGGACA...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGGATTTGGCCCTCCTTaGTCAGTTCATTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRAGFGPP*SVHWPG
Trigger: ACCCGGCCAATGAACTGATCAAGGAGGGCCAAATCC...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACGGTGCCGTTCTTGGCTaGCAGTTTCTGGATTTGGCC +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHGAVLG*QFLDLA
Trigger: GGCCAAATCCAGAAACTGTCAGCCAAGAACGGCACC...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCCGCCACCAAAAGCCTTaGAGGTTTCGCTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSRHQKP*RFRCSV
Trigger: AACAGAACAGCGAAACCTTCAAGGCTTTTGGTGGCG...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGTCCTCATCCTGGCTaGAGGCGCCACCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRGPHPG*RRHQKP
Trigger: AGGCTTTTGGTGGCGCCTTCAGCCAGGATGAGGACC...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCCCACACAGCTTGCAGTaGTGCCTCCTCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLPHSLQ*CLLLVM
Trigger: CATCACCAAGAGGAGGCATCACTGCAAGCTGTGTGG...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGCCACACAGCTTGCAGTaGTGCCTCCTCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRPHSLQ*CLLLVM
Trigger: CATCACCAAGAGGAGGCATCACTGCAAGCTGTGTGG...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACCCACACAGCTTGCAGTaGTGCCTCCTCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHPHSLQ*CLLLVM
Trigger: CATCACCAAGAGGAGGCATCACTGCAAGCTGTGTGG...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGACAAAGCCAAGTGTCCTaGGCTCTGGGCTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRQSQVS*ALGCWP
Trigger: GGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTG...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGAGGGTTGAGGACCCCCTaGCTGACTCCATCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGGLRTP*LTPSLK
Trigger: CTTTAAGGATGGAGTCAGGCAGGGGGTCCTCAACCC...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTAGAGCCGTCCCCTGCTaGAGCCAGGCTGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQARAVPC*SQADRV
Trigger: GACCCTGTCAGCCTGGCTGCAGCAGGGGACGGCTCT...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGGTCCAGGGCCATCTCTaGGTGCGCCCCCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQVQGHL*VRPQYS
Trigger: ACTGTACTGGGGGCGCACGCAGAGATGGCCCTGGAC...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TGCACAGAGACTGGGACCAGCCTCACCCGGCTTGCAAGGGTCACTAGAAGCCTGCATCCGTCAGCCTGGTaGAGAAAACCTGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: CTETGTSLTRLARVTRSLHPSAW*RKPGPA
Trigger: TGCTGGACCAGGTTTTCTGCACCAGGCTGACGGATG...CAGGCTTCTAGTGACCCTTGCAAGCCGGGTGAGGCTGGTCCCAGTCTCTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATTCTTCCCCACCCAGCTaGTCGTACACCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDSSPPS*SYTSKS
Trigger: GCTCTTGGAGGTGTACGAGCAGCTGGGTGGGGAAGA...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACGGCTTGACGATATCCTaGACCTGGAGGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHGLTIS*TWRPEM
Trigger: CATCTCAGGCCTCCAGGTGCAGGATATCGTCAAGCC...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGCTTGACGATATCCTaGACCTGGAGGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYGLTIS*TWRPEM
Trigger: CATCTCAGGCCTCCAGGTGCAGGATATCGTCAAGCC...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGTCCTCTGTCCGCGTCTaGAGCTCCAGGGACCTTTTT +
Preference number: 4 (lower is better)
Translates to: SQDSTGPMWWCAGQWETQSSVRV*SSRDLF
Trigger: AAAAAGGTCCCTGGAGCTGCAGACGCGGACAGAGGA...CTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCTCGCTGTTCTGTTTGTaGTTCTCGATGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGSLFCL*FSMVAW
Trigger: CCAGGCCACCATCGAGAAGCACAAACAGAACAGCGA...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATCGCTGTTCTGTTTGTaGTTCTCGATGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPISLFCL*FSMVAW
Trigger: CCAGGCCACCATCGAGAAGCACAAACAGAACAGCGA...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACAGCTCTTACAGCTCTaGTTCTCCTTGTCACGTCTG +
Preference number: 4 (lower is better)
Translates to: GCPWQCPCCLFLPSGPASQLLQL*FSLSRL
Trigger: CAGACGTGACAAGGAGAAGCAGAGCTGTAAGAGCTG...TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCTGCAGACACGGCTCTaGCGGCTGTTCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSLQTRL*RLFSAL
Trigger: CAAGGCCGAGAACAGCCGGCAGAGCCGTGTCTGCAG...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGTCAGGAAACAATCTCTaGAGACACGGCTCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRSGNNL*RHGSAG
Trigger: GCCGGCAGAGCCGTGTCTGCAGAGATTGTTTCCTGA...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGTGGGTGTCTTCTCTGTaGTCTCAGGGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQWVSSL*SQGPLA
Trigger: AGCCAGTGGCCCCTGAGAGCACAGAGAAGACACCCA...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000468206.6
CDS-3UTR GCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCGCTGGGCTGGGGGTCTaGAGTGGGTGTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCAGLGV*SGCLLC
Trigger: ACAGAGAAGACACCCACTGCAGACCCCCAGCCCAGC...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000468206.6
CDS-3UTR GCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCGTTTCCAGCCACTGCTaGTGCAGCTCTGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCVSSHC*CSSAEE
Trigger: CTCCTCCGCAGAGCTGCAGCAGCAGTGGCTGGAAAC...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAAGGGTTTCCAGCCACTaGTGCTGCAGCTCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRRVSSH*CCSSAE
Trigger: CTCCGCAGAGCTGCAGCAGCAGTGGCTGGAAACCCT...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGCAAATCTCATGCGCCTaGCACTCAGTGGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: SQDSTGPMWWCAGQWETQQISCA*HSVAGV
Trigger: TACCCCAGCCACTGAGTGGCAGGCGCATGAGATTTG...CTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTGGCTTAGACACCCCCTaGCAGAGCTGGACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSGLDTP*QSWTPQ
Trigger: CTGAGGGGTCCAGCTCTGGCAGGGGGTGTCTAAGCC...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGACGACCAGCTCTATGGTaGAGCACCCCCACCACACAC +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRRPALW*STPTTH
Trigger: GTGTGTGGTGGGGGTGCTCCACCATAGAGCTGGTCG...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR CCA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTCTCACTGGGCTCAGGTaGAGGCTGGCCAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQALTGLR*RLARGF
Trigger: GAAGCCCCTGGCCAGCCTCCACCTGAGCCCAGTGAG...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCCCCACAGTGGGCTCTaGGCCCAACAGGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRPHSGL*AQQGAP
Trigger: AGGCGCTCCCTGTTGGGCCCAGAGCCCACTGTGGGG...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCCCCACAGTGGGCTCTaGGCCCAACAGGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGPHSGL*AQQGAP
Trigger: AGGCGCTCCCTGTTGGGCCCAGAGCCCACTGTGGGG...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTCCCGCTGTCCCGGTTaGGGATCTTTAAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQSRCPG*GSLSYH
Trigger: GTGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGA...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACATCTCTCCAGCCACACTaGAGGAGGGACTGTCGATCC +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATSLQPH*RRDCRS
Trigger: GGATCGACAGTCCCTCCTCCAGTGTGGCTGGAGAGA...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATAGCTCCTGGGCAATGTaGAGAAGCTTCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDSSWAM*RSFWGP
Trigger: TGGCCCCCAGAAGCTTCTCCACATTGCCCAGGAGCT...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGAGCAGGAACTGCCCGTaGAAGCGGTGGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLSRNCP*KRWMEE
Trigger: CTCCTCCATCCACCGCTTCCACGGGCAGTTCCTGCT...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGCTTCTGGATGCTGTaGACGACGTCTTTAAACAGT +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGCFWML*TTSLNS
Trigger: ACTGTTTAAAGACGTCGTCCACAGCATCCAGAAGCA...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGGACAGGGACTTCAAGCGTGTCAGTTCTACACACACCATATACATGCACGTGCCGCATCCTTCCGGTCTaGGGCGTCCTGCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GTGTSSVSVLHTPYTCTCRILPV*GVLREP
Trigger: AGGCTCCCGCAGGACGCCCCAGACCGGAAGGATGCG...GCACGTGCATGTATATGGTGTGTGTAGAACTGACACGCTTGAAGTCCCTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCATGGCAGCATTGGAGTaGTTGGCGGCTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLMAALE*LAAVEM
Trigger: CATCTCCACAGCCGCCAACCACTCCAATGCTGCCAT...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTCTCCACTTTCCGAATaGCAGCATTGGAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRSPLSE*QHWSGW
Trigger: CCAACCACTCCAATGCTGCCATTCGGAAAGTGGAGA...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTAAGAGGTGGCGGTCCTaGGGGGTGCCGTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSKRWRS*GVPFLA
Trigger: AGCCAAGAACGGCACCCCCCAGGACCGCCACCTCTT...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCGGACGCTGAACTTCTaGCCCATGAGCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLRTLNF*PMSRSL
Trigger: CAAGCTGCGGCTCATGGGCCAGAAGTTCAGCGTCCG...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCACGATATCCTGCACCTaGAGGCCTGAGATGTCCATC +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGTISCT*RPEMSI
Trigger: GATGGACATCTCAGGCCTCCAGGTGCAGGATATCGT...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTATGTGCTGTGTTTaGCTTGACGATATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGCMCCV*LDDILH
Trigger: GTGCAGGATATCGTCAAGCCAAACACAGCACATACA...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGAGCTCTCAGGGGCCACTaGCTGTGTCAGGAAACAATC +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGALRGH*LCQETI
Trigger: GATTGTTTCCTGACACAGCCAGTGGCCCCTGAGAGC...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGGCTCTCAGGGGCCACTaGCTGTGTCAGGAAACAATC +
Preference number: 4 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVALRGH*LCQETI
Trigger: GATTGTTTCCTGACACAGCCAGTGGCCCCTGAGAGC...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACAGCTGGGGGTCTGCAGTaGGTGTCTTCTCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATAGGLQ*VSSLCS
Trigger: AGAGCACAGAGAAGACACCCACTGCAGACCCCCAGC...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000468206.6
CDS-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGTGCAGGTGCAGCACCTaGGGATCTGACATGGGGATG +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQCRCST*GSDMGM
Trigger: CATCCCCATGTCAGATCCCCAGGTGCTGCACCTGCA...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACATGCAGGTGCAGCACCTaGGGATCTGACATGGGGATG +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATCRCST*GSDMGM
Trigger: CATCCCCATGTCAGATCCCCAGGTGCTGCACCTGCA...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTCAGGACACATCAAAATCATAGGAAAACCCAACAGCAAGTACCTGAGGGTGGGGCCCCCGGGCTGTCCTaGGCCGTGTCCCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: VRTHQNHRKTQQQVPEGGAPGLS*AVSPWA
Trigger: TGCCCATGGGGACACGGCCCAGGACAGCCCGGGGGC...CCCACCCTCAGGTACTTGCTGTTGGGTTTTCCTATGATTTTGATGTGTCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATACAGGTCCAATGTGGTaGTGTGCAGGGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDTGPMW*CAGQWE
Trigger: CTCCCACTGCCCTGCACACCACCACATTGGACCTGT...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAAGTGTCCTGAGCTCTaGGCTGTTGGCCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQKCPEL*AVGPPS
Trigger: TGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTT...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGTGGGCAGAGGCGGGGTaGACCACGCTGCAGACCAGC +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGWAEAG*TTLQTS
Trigger: GCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCA...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CACACTCAGTTTGCAGCTGGGGAGAGGGATGGTGCGGGGCAGCCGGCCGTCCTGTTCCCATCTAACTCCTaGATGCAAATGGTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: HTQFAAGERDGAGQPAVLFPSNS*MQMVPK
Trigger: CTTGGGAACCATTTGCATCCAGGAGTTAGATGGGAA...CAGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCTGCAAACTGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATGTATCTCCCCTCAGGTaGGCCTCAAGGCCTGGACTT +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDVSPLR*ASRPGL
Trigger: AAGTCCAGGCCTTGAGGCCCACCTGAGGGGAGATAC...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGACGTGCCCCAAGGACCTaGGGCTCTCAGAACACACCT +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRRAPRT*GSQNTP
Trigger: AGGTGTGTTCTGAGAGCCCCAGGTCCTTGGGGCACG...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp TCATGTCACTGTTGGAGCTACTGTCCACCATTTGGACGTGGCTTAGACACCCCCTGTCCCACTCCTCCGTaGTCCGCGTCTTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: SCHCWSYCPPFGRGLDTPCPTPP*SASSAP
Trigger: CGGAGCTGAAGACGCGGATCACGGAGGAGTGGGACA...GGGGGTGTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGAGTTCATTGGCCGGGTTaGCAATGTCTTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGVHWPG*QCLLPH
Trigger: GTGGGGAAGAAGACATTGTCAACCCGGCCAATGAAC...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGGGTGCCGTTCTTGGCTaGCAGTTTCTGGATTTGGCC +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWGAVLG*QFLDLA
Trigger: GGCCAAATCCAGAAACTGTCAGCCAAGAACGGCACC...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGCTGCACCTGGAGGCCTaGGATGTCCATCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQLHLEA*DVHLLP
Trigger: CGGGAGAAGATGGACATCTCAGGCCTCCAGGTGCAG...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGGGTCCTCATCCTGGCTaGAGGCGCCACCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQGPHPG*RRHQKP
Trigger: AGGCTTTTGGTGGCGCCTTCAGCCAGGATGAGGACC...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGCCACACAGCTTGCAGTaGTGCCTCCTCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQPHSLQ*CLLLVM
Trigger: CATCACCAAGAGGAGGCATCACTGCAAGCTGTGTGG...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACCACGGCCCATATGGATaGTGGTTACTTTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHHGPYG*WLLWQS
Trigger: CGACTGCCAAAGTAACCATCATCCATATGGGCCGTG...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGCACGGCCCATATGGATaGTGGTTACTTTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRHGPYG*WLLWQS
Trigger: CGACTGCCAAAGTAACCATCATCCATATGGGCCGTG...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGCCAGGTGACCAGGAGTaGCACTTGTTCCCATCTAAC +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQPGDQE*HLFPSN
Trigger: GTTAGATGGGAACAAGTGTCACTCCTGGTCACCTGG...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGTCCAGGGCCATCTCTaGGTGCGCCCCCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQAVQGHL*VRPQYS
Trigger: ACTGTACTGGGGGCGCACGCAGAGATGGCCCTGGAC...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CCTCTGTCATGTCACTGTTGGAGCTACTGTCCACCATTTGGACGTGGCTTAGACAGCGCTGGGTCCACGTaGTCACCAGCCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: PLSCHCWSYCPPFGRGLDSAGST*SPALRL
Trigger: GAGCCGTAGGGCTGGTGAGCACGTGGACCCAGCGCT...GTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGACAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGTACCGGGGGACCCTCTaGACGGGCTCCAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQYRGTL*TGSSMW
Trigger: CCACATGCTGGAGCCCGTGCAGAGGGTCCCCCGGTA...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGATACCGGGGGACCCTCTaGACGGGCTCCAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: HSVAGVSPSRASERGYLGYRGTL*TGSSMW
Trigger: CCACATGCTGGAGCCCGTGCAGAGGGTCCCCCGGTA...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGTCTTCCCCACCCAGCTaGTCGTACACCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLSSPPS*SYTSKS
Trigger: GCTCTTGGAGGTGTACGAGCAGCTGGGTGGGGAAGA...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGTCCTCTGTCCGCGTCTaGAGCTCCAGGGACCTTTTT +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQSSVRV*SSRDLF
Trigger: AAAAAGGTCCCTGGAGCTGCAGACGCGGACAGAGGA...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGTGGGTGTCTTCTCTGTaGTCTCAGGGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLWVSSL*SQGPLA
Trigger: AGCCAGTGGCCCCTGAGAGCACAGAGAAGACACCCA...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000468206.6
CDS-3UTR GCA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTTGCAGCTTCCACACATaGCCCGAGTCCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSCSFHT*PESSLS
Trigger: GGAGAGGCTGGACTCGGGGCATGTGTGGAAGCTGCA...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACGACTGCTTGGCCCACTaGAGCTTCCACACATGCCCC +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHDCLAH*SFHTCP
Trigger: GGGGCATGTGTGGAAGCTGCAGTGGGCCAAGCAGTC...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCTCCAGCCACTGCTGCTaGAGCTCTGCGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRSSHCC*SSAEEA
Trigger: CGCCTCCTCCGCAGAGCTGCAGCAGCAGTGGCTGGA...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGTCCAGCCACTGCTGCTaGAGCTCTGCGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQSSHCC*SSAEEA
Trigger: CGCCTCCTCCGCAGAGCTGCAGCAGCAGTGGCTGGA...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCCCCATGGGCAGCAGTaGTTAGGGTTTCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLPHGQQ*LGFPAT
Trigger: AGTGGCTGGAAACCCTAAGCACTGCTGCCCATGGGG...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGTCCAATGTGGTGGTGTaGAGGGCAGTGGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWSNVVV*RAVGDS
Trigger: TGAGTCTCCCACTGCCCTGCACACCACCACATTGGA...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGCAAATCTCATGCGCCTaGCACTCAGTGGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWQISCA*HSVAGV
Trigger: TACCCCAGCCACTGAGTGGCAGGCGCATGAGATTTG...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACCCATCCTCCTGCTTCTaGTGGGTGGACTTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHPSSCF*WVDFCE
Trigger: CTCACAAAAGTCCACCCAGCAGAAGCAGGAGGATGG...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR GCA 90 bp GTGCGTGCACACACAGCACACACACACACACCACACACACAGGCCCTCCCTCTGGAGCTCGGTAGGCAGTaGAAGGTCCTTCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: VRAHTAHTHTPHTQALPLELGRQ*KVLLHH
Trigger: ATGGTGAAGAAGGACCTTGCACTGCCTACCGAGCTC...CAGAGGGAGGGCCTGTGTGTGTGGTGTGTGTGTGTGTGCTGTGTGTGCACGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCTCACTGGGCTCAGGTaGAGGCTGGCCAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGLTGLR*RLARGF
Trigger: GAAGCCCCTGGCCAGCCTCCACCTGAGCCCAGTGAG...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGACAGGGTCCCCACAGTaGGCTCTGGGCCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGTGSPQ*ALGPTG
Trigger: CCCTGTTGGGCCCAGAGCCCACTGTGGGGACCCTGT...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGCGTGGGGCCTATGTCTaGAGAGCCGTCCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQRGAYV*RAVPCC
Trigger: GCAGCAGGGGACGGCTCTCCAGACATAGGCCCCACG...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCGTGGGGCCTATGTCTaGAGAGCCGTCCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGRGAYV*RAVPCC
Trigger: GCAGCAGGGGACGGCTCTCCAGACATAGGCCCCACG...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGTCCCGCTGTCCCGGTTaGGGATCTTTAAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQSRCPG*GSLSYH
Trigger: GTGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGA...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTCTCCAGCCACACTaGAGGAGGGACTGTCGATCC +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCSLQPH*RRDCRS
Trigger: GGATCGACAGTCCCTCCTCCAGTGTGGCTGGAGAGA...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGTCCTTGTCAGCCTTCTaGGGGGTGTTCTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: SQDSTGPMWWCAGQWETQSLSAF*GVFSES
Trigger: TGACTCTGAGAACACCCCCCAGAAGGCTGACAAGGA...CTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACTCCTTGTCAGCCTTCTaGGGGGTGTTCTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHSLSAF*GVFSES
Trigger: TGACTCTGAGAACACCCCCCAGAAGGCTGACAAGGA...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACCTGGTGCAGAAAACCTaGTCCAGCAGGTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHLVQKT*SSRCSR
Trigger: GCGGCTGCACCTGCTGGACCAGGTTTTCTGCACCAG...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCATGTCACTGTTGGAGCTACTGTCCACCATTTGGACGTGGCTTAGACACCCCCAACAGTGGGGAGCGCTaGGTCCACGTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: SCHCWSYCPPFGRGLDTPNSGER*VHVLTS
Trigger: GCTGGTGAGCACGTGGACCCAGCGCTCCCCACTGTT...GGGGGTGTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp AGGGAGATCAACACTAGAAGCTTCCCAGGAGACTCCAACGTGCAGCTGGCACTGCGGACGCTGAACTTCTaGCCCATGAGCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: REINTRSFPGDSNVQLALRTLNF*PMSRSL
Trigger: CAAGCTGCGGCTCATGGGCCAGAAGTTCAGCGTCCG...CAGTGCCAGCTGCACGTTGGAGTCTCCTGGGAAGCTTCTAGTGTTGATCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATACGATATCCTGCACCTaGAGGCCTGAGATGTCCATC +
Preference number: 4 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYTISCT*RPEMSI
Trigger: GATGGACATCTCAGGCCTCCAGGTGCAGGATATCGT...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCACGATATCCTGCACCTaGAGGCCTGAGATGTCCATC +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLTISCT*RPEMSI
Trigger: GATGGACATCTCAGGCCTCCAGGTGCAGGATATCGT...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTGGGGTCCTCATCCTaGCTGAAGGCGCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLLGSSS*LKAPPK
Trigger: TTTTGGTGGCGCCTTCAGCCAGGATGAGGACCCCAG...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGGCTCTCAGGGGCCACTaGCTGTGTCAGGAAACAATC +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQALRGH*LCQETI
Trigger: GATTGTTTCCTGACACAGCCAGTGGCCCCTGAGAGC...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGGCTGGGGGTCTGCAGTaGGTGTCTTCTCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLAGGLQ*VSSLCS
Trigger: AGAGCACAGAGAAGACACCCACTGCAGACCCCCAGC...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000468206.6
CDS-3UTR CCA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTCCTGGGGATCTGACATaGGGATGGCGGCCCACACCT +
Preference number: 4 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQAPGDLT*GWRPTP
Trigger: AGGTGTGGGCCGCCATCCCCATGTCAGATCCCCAGG...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGTGGTGTGCAGGGCAGTaGGAGACTCAGCTCACGGAG +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQWCAGQ*ETQLTE
Trigger: CTCCGTGAGCTGAGTCTCCCACTGCCCTGCACACCA...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACCAGGGCGCTCTTCATaGGGCCTCCAACACCACCTC +
Preference number: 4 (lower is better)
Translates to: KHCVPLASGTATNLMRLPPGRSS*GLQHHL
Trigger: GAGGTGGTGTTGGAGGCCCCATGAAGAGCGCCCTGG...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACAGGAGCAGGTGTCTaGAGGCTCTGCCGCGCCACC +
Preference number: 4 (lower is better)
Translates to: HSVAGVSPSRASERGYLGTGAGV*RLCRAT
Trigger: GGTGGCGCGGCAGAGCCTCCAGACACCTGCTCCTGT...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGGATCTGCACAGAGACTaGGACCAGCCTCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQDLHRD*DQPHPA
Trigger: AGCCGGGTGAGGCTGGTCCCAGTCTCTGTGCAGATC...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CAA 72 bp CTGCAGGACATAGGCATGTGTGGTATCAGATGGGGTTaGCAGGCTGGGCCCTCCAAGGGGAGGGCATCCATA +
Preference number: 4 (lower is better)
Translates to: LQDIGMCGIRWG*QAGPSKGRASI
Trigger: TATGGATGCCCTCCCCTTGGAGGGCCCAGCCTGCAAACCCCATCTGATACCACACATGCCTATGTCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGATGGCGGCTGTGGAGATaGGCTCCAAGGACCTCTCCG +
Preference number: 4 (lower is better)
Translates to: HSVAGVSPSRASERGYLGWRLWR*APRTSP
Trigger: CGGAGAGGTCCTTGGAGCTCATCTCCACAGCCGCCA...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGGTTCATTGGCCGGGTTaGCAATGTCTTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQVHWPG*QCLLPH
Trigger: GTGGGGAAGAAGACATTGTCAACCCGGCCAATGAAC...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCGGATTTGGCCCTCCTTaGTCAGTTCATTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCGFGPP*SVHWPG
Trigger: ACCCGGCCAATGAACTGATCAAGGAGGGCCAAATCC...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGAAAAGGATCATGCTGTTaGACAGGAAGAGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGKGSCC*TGRGGG
Trigger: ACCGCCACCTCTTCCTGTTCAACAGCATGATCCTTT...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGAAAGGATCATGCTGTTaGACAGGAAGAGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQKGSCC*TGRGGG
Trigger: ACCGCCACCTCTTCCTGTTCAACAGCATGATCCTTT...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGTGCTGTGTTTGGCTTaGCGATATCCTGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SCACHSVAGVSPSRASERVLCLA*RYPAPG
Trigger: TCCAGGTGCAGGATATCGTCAAGCCAAACACAGCAC...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATACGATGGTGGCCTGGATaGTCTGAATCCATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPIRWWPG*SESILS
Trigger: AGAAAGAATGGATTCAGATCATCCAGGCCACCATCG...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGCGCCACCAAAAGCCTTaGAGGTTTCGCTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQRHQKP*RFRCSV
Trigger: AACAGAACAGCGAAACCTTCAAGGCTTTTGGTGGCG...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGCGCCACCAAAAGCCTTaGAGGTTTCGCTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRRHQKP*RFRCSV
Trigger: AACAGAACAGCGAAACCTTCAAGGCTTTTGGTGGCG...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGTTTAAATTGCAGGCATaGGGGAGCTCGGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVFKLQA*GSSVGS
Trigger: ACTGCCTACCGAGCTCCCTCATGCCTGCAATTTAAA...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGGGGTTGAGGACCCCCTaGCTGACTCCATCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLGLRTP*LTPSLK
Trigger: CTTTAAGGATGGAGTCAGGCAGGGGGTCCTCAACCC...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GTGTCAGTTCTACACACACCATATACATGCACGTGCGTGCACACACAGCACACAAGGGCCATCTCTGCGTaGGCCCCCAGTACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VSVLHTPYTCTCVHTQHTRAISA*APSTVG
Trigger: CCCCACTGTACTGGGGGCGCACGCAGAGATGGCCCT...TGTGTGCTGTGTGTGCACGCACGTGCATGTATATGGTGTGTGTAGAACTGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTTTCTGGGGGCCAGAGTaGTGGGCCAGGCCGGCATCC +
Preference number: 4 (lower is better)
Translates to: VSPSRASERGYLGTMSPAFWGPE*WARPAS
Trigger: GGATGCCGGCCTGGCCCAGCACTCTGGCCCCCAGAA...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGACATCCGTCAGCCTGGTaGAGAAAACCTGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRHPSAW*RKPGPA
Trigger: TGCTGGACCAGGTTTTCTGCACCAGGCTGACGGATG...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCCATCCGTCAGCCTGGTaGAGAAAACCTGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCHPSAW*RKPGPA
Trigger: TGCTGGACCAGGTTTTCTGCACCAGGCTGACGGATG...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGTCCTCTGTCCGCGTCTaGAGCTCCAGGGACCTTTTT +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLSSVRV*SSRDLF
Trigger: AAAAAGGTCCCTGGAGCTGCAGACGCGGACAGAGGA...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CCTCTGTCATGTCACTGTTGGAGCTACTGTCCACCATTTGGACGTGGCTTAGACCTGCAGACACGGCTCTaGCGGCTGTTCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PLSCHCWSYCPPFGRGLDLQTRL*RLFSAL
Trigger: CAAGGCCGAGAACAGCCGGCAGAGCCGTGTCTGCAG...GTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGACAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCAGGAAACAATCTCTaGAGACACGGCTCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCSGNNL*RHGSAG
Trigger: GCCGGCAGAGCCGTGTCTGCAGAGATTGTTTCCTGA...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCAGTTTCCAGCCACTGCTaGTGCAGCTCTGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KHCVPLASGTATNLMRLPVSSHC*CSSAEE
Trigger: CTCCTCCGCAGAGCTGCAGCAGCAGTGGCTGGAAAC...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTAGGGTTTCCAGCCACTaGTGCTGCAGCTCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQARVSSH*CCSSAE
Trigger: CTCCGCAGAGCTGCAGCAGCAGTGGCTGGAAACCCT...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGCCCCATGGGCAGCAGTaGTTAGGGTTTCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQPHGQQ*LGFPAT
Trigger: AGTGGCTGGAAACCCTAAGCACTGCTGCCCATGGGG...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCAGCCACAAATCTCATaGGCCTGCCACTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLQPQIS*ACHSVA
Trigger: AGCCACTGAGTGGCAGGCGCATGAGATTTGTGGCTG...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATTCCTTGTCAGCCTTCTaGGGGGTGTTCTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDSLSAF*GVFSES
Trigger: TGACTCTGAGAACACCCCCCAGAAGGCTGACAAGGA...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTATGTGGAGAAGCTTCTaGGGGCCAGAGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQAMWRSF*GPECWA
Trigger: GGCCCAGCACTCTGGCCCCCAGAAGCTTCTCCACAT...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGTGTGCAGGAGCTCCTaGGCAATGTGGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRVCRSS*AMWRSF
Trigger: GAAGCTTCTCCACATTGCCCAGGAGCTCCTGCACAC...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGGACGTCTTTAAACAGTaGGGAGCGCTGGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLDVFKQ*GALGPR
Trigger: ACGTGGACCCAGCGCTCCCCACTGTTTAAAGACGTC...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCTGCTTCTGGATGCTGTaGACGACGTCTTTAAACAGT +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSCFWML*TTSLNS
Trigger: ACTGTTTAAAGACGTCGTCCACAGCATCCAGAAGCA...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGCATACCTCCTGCTTCTaGATGCTGTGGACGACGTCT +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQHTSCF*MLWTTS
Trigger: AGACGTCGTCCACAGCATCCAGAAGCAGGAGGTATG...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAATGGCAGCATTGGAGTaGTTGGCGGCTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRMAALE*LAAVEM
Trigger: CATCTCCACAGCCGCCAACCACTCCAATGCTGCCAT...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATCTCCACTTTCCGAATaGCAGCATTGGAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGSPLSE*QHWSGW
Trigger: CCAACCACTCCAATGCTGCCATTCGGAAAGTGGAGA...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGATCTCCACTTTCCGAATaGCAGCATTGGAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGSPLSE*QHWSGW
Trigger: CCAACCACTCCAATGCTGCCATTCGGAAAGTGGAGA...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTTGGCTGACAGTTTCTaGATTTGGCCCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: LLWATLLGLEARLLAKTCLADSF*IWPSLI
Trigger: GATCAAGGAGGGCCAAATCCAGAAACTGTCAGCCAA...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCTGTATGTGCTGTGTTTaGCTTGACGATATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSCMCCV*LDDILH
Trigger: GTGCAGGATATCGTCAAGCCAAACACAGCACATACA...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCCTGGGGATCTGACATaGGGATGGCGGCCCACACCT +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGPGDLT*GWRPTP
Trigger: AGGTGTGGGCCGCCATCCCCATGTCAGATCCCCAGG...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACGGTACCAGGACTGCTTaGCCCACTGCAGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHGTRTA*PTAAST
Trigger: TGTGGAAGCTGCAGTGGGCCAAGCAGTCCTGGTACC...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAACCACACGGCCCATATaGATGATGGTTACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPITTRPI*MMVTLA
Trigger: TGCCAAAGTAACCATCATCCATATGGGCCGTGTGGT...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGACCACACGGCCCATATaGATGATGGTTACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLTTRPI*MMVTLA
Trigger: TGCCAAAGTAACCATCATCCATATGGGCCGTGTGGT...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGTCCGCATCATTACGCTaGGTGAGAGGAGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQSASLR*VRGAWL
Trigger: AAGCCAAGCTCCTCTCACCCAGCGTAATGATGCGGA...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR CCA 90 bp TCACGGGACAGGGACTTCAAGCGTGTCAGTTCTACACACACCATATACATGCACAGCCTTGGCCCTGGCTaGTCCCGAGAAGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SRDRDFKRVSSTHTIYMHSLGPG*SREASV
Trigger: CACGCTGGCTTCTCGGGACCAGCCAGGGCCAAGGCT...GTGCATGTATATGGTGTGTGTAGAACTGACACGCTTGAAGTCCCTGTCCCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CACACTCAGTTTGCAGCTGGGGAGAGGGATGGTGCGGGGCAGCCGGCCGTCCTGGGCGATGTGCTTTTCTaGAAACTCACGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HTQFAAGERDGAGQPAVLGDVLF*KLTFSF
Trigger: AAAAGAAAACGTGAGTTTCCAGAAAAGCACATCGCC...CAGGACGGCCGGCTGCCCCGCACCATCCCTCTCCCCAGCTGCAAACTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCGTAAGTCAGAGCAGCTaGGACTCTGAAAACACACTG +
Preference number: 4 (lower is better)
Translates to: LLWATLLGLEARLLAKTCVSQSS*DSENTL
Trigger: CAGTGTGTTTTCAGAGTCCCAGCTGCTCTGACTTAC...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTCTACTGTCCACCATTTaGACGTGGCTTAGACACCCC +
Preference number: 4 (lower is better)
Translates to: SCACHSVAGVSPSRASERLLSTI*TWLRHP
Trigger: GGGGTGTCTAAGCCACGTCCAAATGGTGGACAGTAG...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCGGACATAGGCATGTGTaGTATCAGATGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LLWATLLGLEARLLAKTCGHRHV*YQMGFA
Trigger: TGCAAACCCCATCTGATACCACACATGCCTATGTCC...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGTTCATTGGCCGGGTTaGCAATGTCTTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRVHWPG*QCLLPH
Trigger: GTGGGGAAGAAGACATTGTCAACCCGGCCAATGAAC...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCGTGCTGTGTTTGGCTTaGCGATATCCTGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCVLCLA*RYPAPG
Trigger: TCCAGGTGCAGGATATCGTCAAGCCAAACACAGCAC...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGTGCTGTGTTTGGCTTaGCGATATCCTGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRVLCLA*RYPAPG
Trigger: TCCAGGTGCAGGATATCGTCAAGCCAAACACAGCAC...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCGTGGCCTGGATGATCTaGATCCATTCTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGVAWMI*IHSFFS
Trigger: AGAGAAGAAAGAATGGATTCAGATCATCCAGGCCAC...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAGTGGCCTGGATGATCTaGATCCATTCTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPIVAWMI*IHSFFS
Trigger: AGAGAAGAAAGAATGGATTCAGATCATCCAGGCCAC...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCCGATGGTGGCCTGGATaGTCTGAATCCATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLRWWPG*SESILS
Trigger: AGAAAGAATGGATTCAGATCATCCAGGCCACCATCG...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACCGATGGTGGCCTGGATaGTCTGAATCCATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHRWWPG*SESILS
Trigger: AGAAAGAATGGATTCAGATCATCCAGGCCACCATCG...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGCGCCACCAAAAGCCTTaGAGGTTTCGCTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWRHQKP*RFRCSV
Trigger: AACAGAACAGCGAAACCTTCAAGGCTTTTGGTGGCG...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCAATGGGGCCAGCTTCTaGAGGATGTCCCCGAGCCGT +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRNGASF*RMSPSR
Trigger: ACGGCTCGGGGACATCCTGCAGAAGCTGGCCCCATT...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGAATGGGGCCAGCTTCTaGAGGATGTCCCCGAGCCGT +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGNGASF*RMSPSR
Trigger: ACGGCTCGGGGACATCCTGCAGAAGCTGGCCCCATT...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGAATGGGGCCAGCTTCTaGAGGATGTCCCCGAGCCGT +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQNGASF*RMSPSR
Trigger: ACGGCTCGGGGACATCCTGCAGAAGCTGGCCCCATT...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCATCTTCCCCACCCAGCTaGTCGTACACCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KHCVPLASGTATNLMRLPSSPPS*SYTSKS
Trigger: GCTCTTGGAGGTGTACGAGCAGCTGGGTGGGGAAGA...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTATGATGAATGTATGTaGTGTGTTTGGCTTGACGAT +
Preference number: 4 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLYDECM*CVWLDD
Trigger: ATCGTCAAGCCAAACACAGCACATACATTCATCATA...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTATGATGAATGTATGTaGTGTGTTTGGCTTGACGAT +
Preference number: 4 (lower is better)
Translates to: RQAGQRRGGPRCRPAGCGYDECM*CVWLDD
Trigger: ATCGTCAAGCCAAACACAGCACATACATTCATCATA...GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGCAGCTCTTACAGCTCTaGTTCTCCTTGTCACGTCTG +
Preference number: 4 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWQLLQL*FSLSRL
Trigger: CAGACGTGACAAGGAGAAGCAGAGCTGTAAGAGCTG...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAGACTGCTTGGCCCACTaGAGCTTCCACACATGCCCC +
Preference number: 4 (lower is better)
Translates to: HSVAGVSPSRASERGYLGDCLAH*SFHTCP
Trigger: GGGGCATGTGTGGAAGCTGCAGTGGGCCAAGCAGTC...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AACCGCAGGCTGTGTCGAGTGGAGAGAAAGGGCGATGTGCTTTTCTGGAAACTCCTCAGGTACCAGGACTaGTTGGCCCACTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NRRLCRVERKGDVLFWKLLRYQD*LAHCSF
Trigger: GAAGCTGCAGTGGGCCAAGCAGTCCTGGTACCTGAG...GAGTTTCCAGAAAAGCACATCGCCCTTTCTCTCCACTCGACACAGCCTGCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGGGCTGTCCCTGGCAGTaGCCATGCTGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGGCPWQ*PCCLFL
Trigger: CAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTCGGGGTGGACCACGCTaGAGACCAGCAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: VSPSRASERGYLGTMSPARGGPR*RPAGCG
Trigger: GCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCG...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACCAGCCACAAATCTCATaGGCCTGCCACTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHQPQIS*ACHSVA
Trigger: AGCCACTGAGTGGCAGGCGCATGAGATTTGTGGCTG...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGGCTGATTCTAGAAGGTaGAACTTGCAGGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQADSRR*NLQGGG
Trigger: CCCGCCACCCTGCAAGTTGCACCTTCTAGAATCAGC...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR GCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTCCTCGGTATTTAAATTaGAGGCATGAGGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SCACHSVAGVSPSRASERPRYLN*RHEGAR
Trigger: CCGAGCTCCCTCATGCCTGCAATTTAAATACCGAGG...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTACAGGGTCCCCACAGTaGGCTCTGGGCCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: VSPSRASERGYLGTMSPATGSPQ*ALGPTG
Trigger: CCCTGTTGGGCCCAGAGCCCACTGTGGGGACCCTGT...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGGACAGGGACTTCAAGCGTGTCAGTTCTACACACACCATATACATGCACGTGCCACTCAGCTCTCCCGTaGGGCCTATGTCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GTGTSSVSVLHTPYTCTCHSALP*GLCLES
Trigger: GCTCTCCAGACATAGGCCCCACGGGAGAGCTGAGTG...GCACGTGCATGTATATGGTGTGTGTAGAACTGACACGCTTGAAGTCCCTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCGTGACCTTCGGGACCTaGCTGTCCAGGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRVTFGT*LSRAIS
Trigger: AGAGATGGCCCTGGACAGCCAGGTCCCGAAGGTCAC...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGATGTGGAGAAGCTTCTaGGGGCCAGAGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQMWRSF*GPECWA
Trigger: GGCCCAGCACTCTGGCCCCCAGAAGCTTCTCCACAT...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTGTGTGCAGGAGCTCCTaGGCAATGTGGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSVCRSS*AMWRSF
Trigger: GAAGCTTCTCCACATTGCCCAGGAGCTCCTGCACAC...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCTGGTGCAGAAAACCTaGTCCAGCAGGTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGLVQKT*SSRCSR
Trigger: GCGGCTGCACCTGCTGGACCAGGTTTTCTGCACCAG...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAAGCAGGAACTGCCCGTaGAAGCGGTGGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HSVAGVSPSRASERGYLGSRNCP*KRWMEE
Trigger: CTCCTCCATCCACCGCTTCCACGGGCAGTTCCTGCT...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGGACGTCTTTAAACAGTaGGGAGCGCTGGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQDVFKQ*GALGPR
Trigger: ACGTGGACCCAGCGCTCCCCACTGTTTAAAGACGTC...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACGACGTCTTTAAACAGTaGGGAGCGCTGGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHDVFKQ*GALGPR
Trigger: ACGTGGACCCAGCGCTCCCCACTGTTTAAAGACGTC...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTGACGTCTTTAAACAGTaGGGAGCGCTGGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSDVFKQ*GALGPR
Trigger: ACGTGGACCCAGCGCTCCCCACTGTTTAAAGACGTC...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCTGCTTCTGGATGCTGTaGACGACGTCTTTAAACAGT +
Preference number: 4 (lower is better)
Translates to: WGLQHHLPGQHRSNVVVCCFWML*TTSLNS
Trigger: ACTGTTTAAAGACGTCGTCCACAGCATCCAGAAGCA...GCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGACATACCTCCTGCTTCTaGATGCTGTGGACGACGTCT +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRHTSCF*MLWTTS
Trigger: AGACGTCGTCCACAGCATCCAGAAGCAGGAGGTATG...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGTCTCCACTTTCCGAATaGCAGCATTGGAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQSPLSE*QHWSGW
Trigger: CCAACCACTCCAATGCTGCCATTCGGAAAGTGGAGA...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTTCTCCACTTTCCGAATaGCAGCATTGGAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SCACHSVAGVSPSRASERSPLSE*QHWSGW
Trigger: CCAACCACTCCAATGCTGCCATTCGGAAAGTGGAGA...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTTGGCTGACAGTTTCTaGATTTGGCCCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQLADSF*IWPSLI
Trigger: GATCAAGGAGGGCCAAATCCAGAAACTGTCAGCCAA...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCGGACGCTGAACTTCTaGCCCATGAGCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGRTLNF*PMSRSL
Trigger: CAAGCTGCGGCTCATGGGCCAGAAGTTCAGCGTCCG...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGTATGTGCTGTGTTTaGCTTGACGATATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPICMCCV*LDDILH
Trigger: GTGCAGGATATCGTCAAGCCAAACACAGCACATACA...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGTACCAGGACTGCTTaGCCCACTGCAGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQAGTRTA*PTAAST
Trigger: TGTGGAAGCTGCAGTGGGCCAAGCAGTCCTGGTACC...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGTGGGCCGTGTCCCCATaGGCAGCAGTGCTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGWAVSP*AAVLRV
Trigger: AACCCTAAGCACTGCTGCCCATGGGGACACGGCCCA...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGTGGGCCGTGTCCCCATaGGCAGCAGTGCTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQWAVSP*AAVLRV
Trigger: AACCCTAAGCACTGCTGCCCATGGGGACACGGCCCA...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGATGGGCCGTGTCCCCATaGGCAGCAGTGCTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: HSVAGVSPSRASERGYLGWAVSP*AAVLRV
Trigger: AACCCTAAGCACTGCTGCCCATGGGGACACGGCCCA...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACCCTGCTTCTGCTGGGTaGACTTTTGTGAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHPASAG*TFVSRS
Trigger: AGATCTACTCACAAAAGTCCACCCAGCAGAAGCAGG...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR CCA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCACCCACATCTATCCTaGTCCCAGGGACACTCCGAA +
Preference number: 4 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSHPHLS*SQGHSE
Trigger: TTCGGAGTGTCCCTGGGACCAGGATAGATGTGGGTG...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp GCTGTGGAGACATGGCCAAGATCTGCACAGAGACTGGGACCAGCCTCACCCGGCCTGTCATGTCACTGTTaGAGCTACTGTCCACCATTT +
Preference number: 4 (lower is better)
Translates to: AVETWPRSAQRLGPASPGLSCHC*SYCPPF
Trigger: AAATGGTGGACAGTAGCTCCAACAGTGACATGACAG...GCCGGGTGAGGCTGGTCCCAGTCTCTGTGCAGATCTTGGCCATGTCTCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CCTCTGTCATGTCACTGTTGGAGCTACTGTCCACCATTTGGACGTGGCTTAGACGCTGGGGGTCTGCAGTaGGTGTCTTCTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: PLSCHCWSYCPPFGRGLDAGGLQ*VSSGDT
Trigger: TGTGTCCCCAGAAGACACCCACTGCAGACCCCCAGC...GTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGACAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTAGATGGTTTCCTTaGAAATCTCTTCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRGRWFP*KSLPCP
Trigger: TGGGCAAGGAAGAGATTTTCAAGGAAACCATCTACC...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGGGTAGATGGTTTCCTTaGAAATCTCTTCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVGRWFP*KSLPCP
Trigger: TGGGCAAGGAAGAGATTTTCAAGGAAACCATCTACC...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp AACCGCAGGCTGTGTCGAGTGGAGAGAAAGGGCGATGTGCTTTTCTGGAAACTCGGTGCCGTTCTTGGCTaGCAGTTTCTGGATTTGGCC +
Preference number: 4 (lower is better)
Translates to: NRRLCRVERKGDVLFWKLGAVLG*QFLDLA
Trigger: GGCCAAATCCAGAAACTGTCAGCCAAGAACGGCACC...GAGTTTCCAGAAAAGCACATCGCCCTTTCTCTCCACTCGACACAGCCTGCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACGTGCTGTGTTTGGCTTaGCGATATCCTGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHVLCLA*RYPAPG
Trigger: TCCAGGTGCAGGATATCGTCAAGCCAAACACAGCAC...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAATAGACTTACATCCTTaGCTTCTTAGACCAAGGACC +
Preference number: 4 (lower is better)
Translates to: VPMLPLSAFRASITTRPIIDLHP*LLRPRT
Trigger: GGTCCTTGGTCTAAGAAGTCAAGGATGTAAGTCTAT...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GTCAGGACACATCAAAATCATAGGAAAACCCAACAGCAAGTACCTGAGGGTGGGTCCGGCAGCAGGAACTaGCCGTGGAAGCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: VRTHQNHRKTQQQVPEGGSGSRN*PWKRWM
Trigger: CATCCACCGCTTCCACGGGCAGTTCCTGCTGCCGGA...CCCACCCTCAGGTACTTGCTGTTGGGTTTTCCTATGATTTTGATGTGTCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGAACCTCCAAGAGCTTGTaGATTTTCTCCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGTSKSL*IFSTFR
Trigger: TCGGAAAGTGGAGAAAATGCACAAGCTCTTGGAGGT...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACACCTCCAAGAGCTTGTaGATTTTCTCCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHTSKSL*IFSTFR
Trigger: TCGGAAAGTGGAGAAAATGCACAAGCTCTTGGAGGT...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGTCTTCCCCACCCAGCTaGTCGTACACCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQSSPPS*SYTSKS
Trigger: GCTCTTGGAGGTGTACGAGCAGCTGGGTGGGGAAGA...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACTCGCTGTTCTGTTTGTaGTTCTCGATGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHSLFCL*FSMVAW
Trigger: CCAGGCCACCATCGAGAAGCACAAACAGAACAGCGA...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGACTCAGGTACCAGGACTaGTTGGCCCACTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HSVAGVSPSRASERGYLGLRYQD*LAHCSF
Trigger: GAAGCTGCAGTGGGCCAAGCAGTCCTGGTACCTGAG...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGCTCAGGTACCAGGACTaGTTGGCCCACTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQLRYQD*LAHCSF
Trigger: GAAGCTGCAGTGGGCCAAGCAGTCCTGGTACCTGAG...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACAAATCTCATGCGCCTaGCACTCAGTGGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: KHCVPLASGTATNLMRLPQISCA*HSVAGV
Trigger: TACCCCAGCCACTGAGTGGCAGGCGCATGAGATTTG...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCAACCACCATCCTCCTaGTTCTGCTGGGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSQPPSS*FCWVDF
Trigger: AAAGTCCACCCAGCAGAAGCAGGAGGATGGTGGTTG...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGTCTCTCCAGCCACACTaGAGGAGGGACTGTCGATCC +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGSLQPH*RRDCRS
Trigger: GGATCGACAGTCCCTCCTCCAGTGTGGCTGGAGAGA...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGCCGCATCCGTCAGCCTaGTGCAGAAAACCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQPHPSA*CRKPGP
Trigger: TGGACCAGGTTTTCTGCACCAGGCTGACGGATGCGG...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATTGCTTCTGGATGCTGTaGACGACGTCTTTAAACAGT +
Preference number: 4 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYCFWML*TTSLNS
Trigger: ACTGTTTAAAGACGTCGTCCACAGCATCCAGAAGCA...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGATGCTTCTGGATGCTGTaGACGACGTCTTTAAACAGT +
Preference number: 4 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGCFWML*TTSLNS
Trigger: ACTGTTTAAAGACGTCGTCCACAGCATCCAGAAGCA...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTATGGCAGCATTGGAGTaGTTGGCGGCTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQAMAALE*LAAVEM
Trigger: CATCTCCACAGCCGCCAACCACTCCAATGCTGCCAT...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGGACAGTTTCTGGATTTaGCCCTCCTTGATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVDSFWI*PSLISS
Trigger: TGAACTGATCAAGGAGGGCCAAATCCAGAAACTGTC...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACATTGGCTGACAGTTTCTaGATTTGGCCCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: TAHMDDGYFGSRPLLWATLADSF*IWPSLI
Trigger: GATCAAGGAGGGCCAAATCCAGAAACTGTCAGCCAA...TGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACTGTATGTGCTGTGTTTaGCTTGACGATATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHCMCCV*LDDILH
Trigger: GTGCAGGATATCGTCAAGCCAAACACAGCACATACA...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAAGCACAGGTCCAATGTaGTGGTGTGCAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HSVAGVSPSRASERGYLGSTGPM*WCAGQW
Trigger: CCACTGCCCTGCACACCACCACATTGGACCTGTGCT...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCAGGGTGGCGGGGGCAATaGCAAACAAACATGCAATCC +
Preference number: 4 (lower is better)
Translates to: KHCVPLASGTATNLMRLPGWRGQ*QTNMQS
Trigger: GGATTGCATGTTTGTTTGCCATTGCCCCCGCCACCC...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGGTGCAACTTGCAGGGTaGCGGGGGCAATGGCAAACA +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGVQLAG*RGQWQT
Trigger: TGTTTGCCATTGCCCCCGCCACCCTGCAAGTTGCAC...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR CCA 90 bp GTGTCAGTTCTACACACACCATATACATGCACGTGCGTGCACACACAGCACACAATGGTTCCCAAGCCTTaGCCCTGGCTGGTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: VSVLHTPYTCTCVHTQHTMVPKP*PWLVPR
Trigger: TCTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCAT...TGTGTGCTGTGTGTGCACGCACGTGCATGTATATGGTGTGTGTAGAACTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp AACCGCAGGCTGTGTCGAGTGGAGAGAAAGGGCGATGTGCTTTTCTGGAAACTCTCCACCATTTGGACGTaGCTTAGACACCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: NRRLCRVERKGDVLFWKLSTIWT*LRHPLP
Trigger: TGGCAGGGGGTGTCTAAGCCACGTCCAAATGGTGGA...GAGTTTCCAGAAAAGCACATCGCCCTTTCTCTCCACTCGACACAGCCTGCGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGCTGGCTGTGGAGACATaGCCAAGATCTGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQLAVET*PRSAQR
Trigger: TCTCTGTGCAGATCTTGGCCATGTCTCCACAGCCAG...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
3UTR CAA 72 bp ACCACACACACAGGCCCTCCCTCTGTCATGTCACTGTaGGAGCTACTGTCCACCATTTGGACGTGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: TTHTGPPSVMSL*ELLSTIWTWLR
Trigger: TCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGACAGAGGGAGGGCCTGTGTGTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTCAAAGCCAAGTGTCCTaGGCTCTGGGCTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: VSPSRASERGYLGTMSPAQSQVS*ALGCWP
Trigger: GGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTG...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCATCATTACGCTGGGTaGGAGGAGCTTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRHHYAG*EELGLL
Trigger: CAGCAAGCCAAGCTCCTCTCACCCAGCGTAATGATG...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR TCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCGGAGGTACTGTCTTCTaGAGGCGAGCGAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRGGTVF*RRASFS
Trigger: GGAGAAACTCGCTCGCCTTCAGAAGACAGTACCTCC...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416701.6
ENST00000468206.6
CDS-3UTR TCA 90 bp GCTGTGGAGACATGGCCAAGATCTGCACAGAGACTGGGACCAGCCTCACCCGGCAATAGACTGTATTCTTaGGGAAGGAAGTCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: AVETWPRSAQRLGPASPGNRLYS*GRKSGK
Trigger: TTTCCCTGACTTCCTTCCTCAAGAATACAGTCTATT...GCCGGGTGAGGCTGGTCCCAGTCTCTGTGCAGATCTTGGCCATGTCTCCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCTCAGGAAACAATCTCTaGAGACACGGCTCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRSGNNL*RHGSAG
Trigger: GCCGGCAGAGCCGTGTCTGCAGAGATTGTTTCCTGA...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGACGTCTTTAAACAGTaGGGAGCGCTGGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQDVFKQ*GALGPR
Trigger: ACGTGGACCCAGCGCTCCCCACTGTTTAAAGACGTC...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGGCTCTCAGGGGCCACTaGCTGTGTCAGGAAACAATC +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGALRGH*LCQETI
Trigger: GATTGTTTCCTGACACAGCCAGTGGCCCCTGAGAGC...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTTGGGCCGTGTCCCCATaGGCAGCAGTGCTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: VSPSRASERGYLGTMSPAWAVSP*AAVLRV
Trigger: AACCCTAAGCACTGCTGCCCATGGGGACACGGCCCA...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGAGCGAGTTTCTCCTCTaGGCTGAACTTCGTGCAATA +
Preference number: 4 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLSEFLL*AELRAI
Trigger: TATTGCACGAAGTTCAGCCCAGAGGAGAAACTCGCT...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR TCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGTTCATTGGCCGGGTTaGCAATGTCTTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQVHWPG*QCLLPH
Trigger: GTGGGGAAGAAGACATTGTCAACCCGGCCAATGAAC...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp TCACGGGACAGGGACTTCAAGCGTGTCAGTTCTACACACACCATATACATGCACGGATTTGGCCCTCCTTaGTCAGTTCATTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SRDRDFKRVSSTHTIYMHGFGPP*SVHWPG
Trigger: ACCCGGCCAATGAACTGATCAAGGAGGGCCAAATCC...GTGCATGTATATGGTGTGTGTAGAACTGACACGCTTGAAGTCCCTGTCCCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCAAAAGGATCATGCTGTTaGACAGGAAGAGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: KHCVPLASGTATNLMRLPKGSCC*TGRGGG
Trigger: ACCGCCACCTCTTCCTGTTCAACAGCATGATCCTTT...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCGTGGCCTGGATGATCTaGATCCATTCTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCVAWMI*IHSFFS
Trigger: AGAGAAGAAAGAATGGATTCAGATCATCCAGGCCAC...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCACGGCCCATATGGATaGTGGTTACTTTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGHGPYG*WLLWQS
Trigger: CGACTGCCAAAGTAACCATCATCCATATGGGCCGTG...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCACCTCCAAGAGCTTGTaGATTTTCTCCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCTSKSL*IFSTFR
Trigger: TCGGAAAGTGGAGAAAATGCACAAGCTCTTGGAGGT...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGTATGATGAATGTATGTaGTGTGTTTGGCTTGACGAT +
Preference number: 4 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLYDECM*CVWLDD
Trigger: ATCGTCAAGCCAAACACAGCACATACATTCATCATA...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp TCATGTCACTGTTGGAGCTACTGTCCACCATTTGGACGTGGCTTAGACACCCCCCAGCTCTTACAGCTCTaGTTCTCCTTGTCACGTCTG +
Preference number: 4 (lower is better)
Translates to: SCHCWSYCPPFGRGLDTPQLLQL*FSLSRL
Trigger: CAGACGTGACAAGGAGAAGCAGAGCTGTAAGAGCTG...GGGGGTGTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACAGCTCTTACAGCTCTaGTTCTCCTTGTCACGTCTG +
Preference number: 4 (lower is better)
Translates to: KHCVPLASGTATNLMRLPQLLQL*FSLSRL
Trigger: CAGACGTGACAAGGAGAAGCAGAGCTGTAAGAGCTG...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCGGGAGGGCATCCATATaGTGGGTCAGGACACATCAA +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRGRASI*WVRTHQ
Trigger: TTGATGTGTCCTGACCCAGCATATGGATGCCCTCCC...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACTTGGCTGACAGTTTCTaGATTTGGCCCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHLADSF*IWPSLI
Trigger: GATCAAGGAGGGCCAAATCCAGAAACTGTCAGCCAA...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTTGCAGGTGCAGCACCTaGGGATCTGACATGGGGATG +
Preference number: 4 (lower is better)
Translates to: VSPSRASERGYLGTMSPACRCST*GSDMGM
Trigger: CATCCCCATGTCAGATCCCCAGGTGCTGCACCTGCA...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTACAGGTCCAATGTGGTaGTGTGCAGGGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VSPSRASERGYLGTMSPATGPMW*CAGQWE
Trigger: CTCCCACTGCCCTGCACACCACCACATTGGACCTGT...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCATGGGTGAGAGGAGCTTaGCTTGCTGATTCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: KHCVPLASGTATNLMRLPWVRGA*LADSRR
Trigger: CCTTCTAGAATCAGCAAGCCAAGCTCCTCTCACCCA...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR TCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCAAAGGATCATGCTGTTaGACAGGAAGAGGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRKGSCC*TGRGGG
Trigger: ACCGCCACCTCTTCCTGTTCAACAGCATGATCCTTT...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGGTGGCCTGGATGATCTaGATCCATTCTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LCATSIRNSHKSHAPATQVAWMI*IHSFFS
Trigger: AGAGAAGAAAGAATGGATTCAGATCATCCAGGCCAC...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAAATGGCAAACAAACATaGAATCCACAGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRNGKQT*NPQLST
Trigger: AGTGGAGAGCTGTGGATTGCATGTTTGTTTGCCATT...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR CCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACTGTATGTGCTGTGTTTaGCTTGACGATATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHCMCCV*LDDILH
Trigger: GTGCAGGATATCGTCAAGCCAAACACAGCACATACA...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACAGGGCATCCATATGCTaGGTCAGGACACATCAAAAT +
Preference number: 4 (lower is better)
Translates to: SERGYLGTMSPARMGQAHRASIC*VRTHQN
Trigger: ATTTTGATGTGTCCTGACCCAGCATATGGATGCCCT...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTGTTCATTGGCCGGGTTaGCAATGTCTTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: VSPSRASERGYLGTMSPAVHWPG*QCLLPH
Trigger: GTGGGGAAGAAGACATTGTCAACCCGGCCAATGAAC...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGCGATGGTGGCCTGGATaGTCTGAATCCATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQRWWPG*SESILS
Trigger: AGAAAGAATGGATTCAGATCATCCAGGCCACCATCG...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCAAGAGAAAGGGCGATGTaGTTTTCTGGAAACTCACGT +
Preference number: 4 (lower is better)
Translates to: KHCVPLASGTATNLMRLPRERAM*FSGNSR
Trigger: ACGTGAGTTTCCAGAAAAGCACATCGCCCTTTCTCT...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR TCA 90 bp GGGACAGGGACTTCAAGCGTGTCAGTTCTACACACACCATATACATGCACGTGCGGTAGATGGTTTCCTTaGAAATCTCTTCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GTGTSSVSVLHTPYTCTCGRWFP*KSLPCP
Trigger: TGGGCAAGGAAGAGATTTTCAAGGAAACCATCTACC...GCACGTGCATGTATATGGTGTGTGTAGAACTGACACGCTTGAAGTCCCTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR GCA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCACCTCCAAGAGCTTGTaGATTTTCTCCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: ADKHCVPLASGTATNLMRTSKSL*IFSTFR
Trigger: TCGGAAAGTGGAGAAAATGCACAAGCTCTTGGAGGT...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGACCTCCAAGAGCTTGTaGATTTTCTCCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQTSKSL*IFSTFR
Trigger: TCGGAAAGTGGAGAAAATGCACAAGCTCTTGGAGGT...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGATATGATGAATGTATGTaGTGTGTTTGGCTTGACGAT +
Preference number: 4 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRYDECM*CVWLDD
Trigger: ATCGTCAAGCCAAACACAGCACATACATTCATCATA...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR GCA 90 bp GGGACAGGGACTTCAAGCGTGTCAGTTCTACACACACCATATACATGCACGTGCCATCTAACTCCTGGATaGAAATGGTTCCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: GTGTSSVSVLHTPYTCTCHLTPG*KWFPSL
Trigger: AAGGCTTGGGAACCATTTGCATCCAGGAGTTAGATG...GCACGTGCATGTATATGGTGTGTGTAGAACTGACACGCTTGAAGTCCCTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CCA 90 bp AGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGGACAGTTTCTGGATTTaGCCCTCCTTGATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SRASERGYLGTMSPARMGDSFWI*PSLISS
Trigger: TGAACTGATCAAGGAGGGCCAAATCCAGAAACTGTC...CCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTCGATGGTGGCCTGGATaGTCTGAATCCATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: VSPSRASERGYLGTMSPARWWPG*SESILS
Trigger: AGAAAGAATGGATTCAGATCATCCAGGCCACCATCG...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR TCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTCTGGGTGGACTTTTGTaGGTAGATCTGCTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: VSPSRASERGYLGTMSPALGGLL*VDLLCR
Trigger: TCTACACAGCAGATCTACTCACAAAAGTCCACCCAG...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR GCA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTTATGATGAATGTATGTaGTGTGTTTGGCTTGACGAT +
Preference number: 4 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQAYDECM*CVWLDD
Trigger: ATCGTCAAGCCAAACACAGCACATACATTCATCATA...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CCA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTGACAGTTTCTGGATTTaGCCCTCCTTGATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: VSPSRASERGYLGTMSPADSFWI*PSLISS
Trigger: TGAACTGATCAAGGAGGGCCAAATCCAGAAACTGTC...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS CCA 90 bp AGGAGGATGCTGAGGGTCGGCGGGCACAGGCGCCTGGCTCCGTGCTaGGGTCTGGGGTTGGCCGGCAGGAGCTTGCACACGGTAGATGGT +
Preference number: 5 (lower is better)
Translates to: RRMLRVGGHRRLAPC*GLGLAGRSLHTVDG
Trigger: ACCATCTACCGTGTGCAAGCTCCTGCCGGCCAACCCCAGACCCCAGCACGGAGCCAGGCGCCTGTGCCCGCCGACCCTCAGCATCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS-3UTR CAA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTCTGAGCTCTGGGCTGTaGGCCCACCCTCAGCAGTCC +
Preference number: 5 (lower is better)
Translates to: DRLGRGGVDHAADQQDVALSSGL*AHPQQS
Trigger: GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAG...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGCTGAGCTCTGGGCTGTaGGCCCACCCTCAGCAGTCC +
Preference number: 5 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLLSSGL*AHPQQS
Trigger: GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAG...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS CCA 90 bp GCTGTCCAGGGCCATCTCTGCGTGCGCCCCCAGTACAGTGGGGCTTaGGCCAGCCTCCAAGCCCTCCTCGCAGGGAAAGTTCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AVQGHLCVRPQYSGA*ASLQALLAGKVLSS
Trigger: GCTGGAGAGAACTTTCCCTGCGAGGAGGGCTTGGAGGCTGGCCCAAGCCCCACTGTACTGGGGGCGCACGCAGAGATGGCCCTGGACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS-3UTR CAA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAAATGGTTCCCAAGCCTaGGCCCTGGCTGGTCCCGAG +
Preference number: 5 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGNGSQA*ALAGPE
Trigger: CTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCATT...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS CCA 90 bp TGGGGGCCAGAGTGCTGGGCCAGGCCGGCATCCTTGTCAGCCTTCTaGGGGGTGTTCTCAGAGTCAGGTTCCTCACCCACGTCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: WGPECWARPASLSAF*GVFSESGSSPTSLS
Trigger: GGACAGCGACGTGGGTGAGGAACCTGACTCTGAGAACACCCCCCAGAAGGCTGACAAGGATGCCGGCCTGGCCCAGCACTCTGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATGGGTCCTGGAGGGGTaGAGGACCCCCTGCCTGACT +
Preference number: 5 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPWVLEG*RTPCLT
Trigger: AGTCAGGCAGGGGGTCCTCAACCCCTCCAGGACCCA...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGGCAGCATTGGAGTGGTaGGCGGCTGTGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLAALEW*AAVEMS
Trigger: GCTCATCTCCACAGCCGCCAACCACTCCAATGCTGC...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTCGGCTGTTCTCGGCCTaGAACTCGGAGCACTTCCCA +
Preference number: 5 (lower is better)
Translates to: DRLGRGGVDHAADQQDVARLFSA*NSEHFP
Trigger: TGGGAAGTGCTCCGAGTTCAAGGCCGAGAACAGCCG...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTTCCGGCACACTCAGTTaGCAGCTGGGGAGAGGGATG +
Preference number: 5 (lower is better)
Translates to: DRLGRGGVDHAADQQDVASGTLS*QLGRGM
Trigger: CATCCCTCTCCCCAGCTGCAAACTGAGTGTGCCGGA...AGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGCCTGCCCTGGTTGCCTaGAGCAGGCAGGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLPALVA*SRQVCL
Trigger: GAGGCACACCTGCCTGCTCAAGGCAACCAGGGCAGG...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR CAA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCGAGGCTGGGGTCTCCTaGGGGACCTGGAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCEAGVS*GTWRAG
Trigger: CCCGGCCCTCCAGGTCCCCAAGGAGACCCCAGCCTC...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375482.8
CDS CCA 90 bp GGGAGGAACTGCCAGGCCCAGTGTCTGGCATCCCTAGGGCAGCAATaGGTCCTGGAGGGGTTGAGGACCCCCTGCCTGACTCCATCCTTA +
Preference number: 5 (lower is better)
Translates to: GRNCQAQCLASLGQQ*VLEGLRTPCLTPSL
Trigger: TAAGGATGGAGTCAGGCAGGGGGTCCTCAACCCCTCCAGGACCCATTGCTGCCCTAGGGATGCCAGACACTGGGCCTGGCAGTTCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS CCA 90 bp TGTTCCCAGCCTGGGGGCCCCACTGAGACACACCCACATCTATCCTaGTCCCAGGGACACTCCGAAAGCAGAGGCAGCTGGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: CSQPGGPTETHPHLS*SQGHSESRGSWSCW
Trigger: CCAGCAGCTCCAGCTGCCTCTGCTTTCGGAGTGTCCCTGGGACCAGGATAGATGTGGGTGTGTCTCAGTGGGGCCCCCAGGCTGGGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CAA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGTGGGTCCTGGAGGGGTaGAGGACCCCCTGCCTGACT +
Preference number: 5 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVWVLEG*RTPCLT
Trigger: AGTCAGGCAGGGGGTCCTCAACCCCTCCAGGACCCA...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCCGGCTGTTCTCGGCCTaGAACTCGGAGCACTTCCCA +
Preference number: 5 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSRLFSA*NSEHFP
Trigger: TGGGAAGTGCTCCGAGTTCAAGGCCGAGAACAGCCG...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp ACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCCGGCTGTTCTCGGCCTaGAACTCGGAGCACTTCCCA +
Preference number: 5 (lower is better)
Translates to: TIQLTRCRQAGQRRGGPRRLFSA*NSEHFP
Trigger: TGGGAAGTGCTCCGAGTTCAAGGCCGAGAACAGCCG...GCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCTGAGCTCTGGGCTGTaGGCCCACCCTCAGCAGTCC +
Preference number: 5 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVLSSGL*AHPQQS
Trigger: GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAG...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACTGAGCTCTGGGCTGTaGGCCCACCCTCAGCAGTCC +
Preference number: 5 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGLSSGL*AHPQQS
Trigger: GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAG...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTGGATGATGGTTACTTaGGCAGTCGGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLWMMVT*AVGPCS
Trigger: AGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCA...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCATTCCGAATGGCAGCATaGGAGTGGTTGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GCPWQCPCCLFLPSGPASFRMAA*EWLAAV
Trigger: CACAGCCGCCAACCACTCCAATGCTGCCATTCGGAA...TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGAGCGCCACCAAAAGCCTaGAAGGTTTCGCTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: RCRQAGQRRGGPRCRPAGAPPKA*KVSLFC
Trigger: ACAGAACAGCGAAACCTTCAAGGCTTTTGGTGGCGC...TCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGTCTACACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATACGGCTGTTCTCGGCCTaGAACTCGGAGCACTTCCCA +
Preference number: 5 (lower is better)
Translates to: VPMLPLSAFRASITTRPIRLFSA*NSEHFP
Trigger: TGGGAAGTGCTCCGAGTTCAAGGCCGAGAACAGCCG...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGCCAGCCTCACCCGGCTaGCAAGGGTCACTAGAAGCC +
Preference number: 5 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQPASPG*QGSLEA
Trigger: GGCTTCTAGTGACCCTTGCAAGCCGGGTGAGGCTGG...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS GCA 90 bp GCATCCCTAGGGCAGCAATGGGTCCTGGAGGGGTTGAGGACCCCCTaGCTGACTCCATCCTTAAAGCTGAGCTCACTGGGCTCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: ASLGQQWVLEGLRTP*LTPSLKLSSLGSGG
Trigger: TCCACCTGAGCCCAGTGAGCTCAGCTTTAAGGATGGAGTCAGGCAGGGGGTCCTCAACCCCTCCAGGACCCATTGCTGCCCTAGGGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS CCA 90 bp CTCCAGCCACACTGGAGGAGGGACTGTCGATCCCGCTGTCCCGGTTaGGGATCTTTAAGCTACCACTCAGCTCTCCCGTGGGGCCTATGT +
Preference number: 5 (lower is better)
Translates to: LQPHWRRDCRSRCPG*GSLSYHSALPWGLC
Trigger: ACATAGGCCCCACGGGAGAGCTGAGTGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGATCGACAGTCCCTCCTCCAGTGTGGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS CCA 90 bp CAGCCTCCAAGCCCTCCTCGCAGGGAAAGTTCTCTCCAGCCACACTaGAGGAGGGACTGTCGATCCCGCTGTCCCGGTTGGGGATCTTTA +
Preference number: 5 (lower is better)
Translates to: QPPSPPRRESSLQPH*RRDCRSRCPGWGSL
Trigger: TAAAGATCCCCAACCGGGACAGCGGGATCGACAGTCCCTCCTCCAGTGTGGCTGGAGAGAACTTTCCCTGCGAGGAGGGCTTGGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS CCA 90 bp GCATACCTCCTGCTTCTGGATGCTGTGGACGACGTCTTTAAACAGTaGGGAGCGCTGGGTCCACGTGCTCACCAGCCCTACGGCTCGGTC +
Preference number: 5 (lower is better)
Translates to: AYLLLLDAVDDVFKQ*GALGPRAHQPYGSV
Trigger: GACCGAGCCGTAGGGCTGGTGAGCACGTGGACCCAGCGCTCCCCACTGTTTAAAGACGTCGTCCACAGCATCCAGAAGCAGGAGGTATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGCAGCATTGGAGTGGTaGGCGGCTGTGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: GKQVTIQLTRCRQAGQRRAALEW*AAVEMS
Trigger: GCTCATCTCCACAGCCGCCAACCACTCCAATGCTGC...CCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTTCCGAATGGCAGCATaGGAGTGGTTGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LLWATLLGLEARLLAKTCFRMAA*EWLAAV
Trigger: CACAGCCGCCAACCACTCCAATGCTGCCATTCGGAA...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCCGGCACACTCAGTTaGCAGCTGGGGAGAGGGATG +
Preference number: 5 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLSGTLS*QLGRGM
Trigger: CATCCCTCTCCCCAGCTGCAAACTGAGTGTGCCGGA...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCAGCTCTTAGCCAAAACTaGCTGGGTGACCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPALSQN*LGDPWP
Trigger: TGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATAATCCCGCTGTCCCGGTaGGGGATCTTTAAGCTACCA +
Preference number: 5 (lower is better)
Translates to: VPMLPLSAFRASITTRPIIPLSR*GIFKLP
Trigger: TGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGAT...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGGCAGCATTGGAGTGGTaGGCGGCTGTGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQAALEW*AAVEMS
Trigger: GCTCATCTCCACAGCCGCCAACCACTCCAATGCTGC...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCTCTGGGCCACACTTCCGAATGGCAGCATaGGAGTGGTTGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RPIWMMVTLAVGPCSGPHFRMAA*EWLAAV
Trigger: CACAGCCGCCAACCACTCCAATGCTGCCATTCGGAA...GTGTGGCCCAGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp ACAGGCTGGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCTTGATCAGTTCATaGGCCGGGTTGACAATGTCT +
Preference number: 5 (lower is better)
Translates to: TGWAEAGWTTLQTSRMWLSLISS*AGLTMS
Trigger: AGACATTGTCAACCCGGCCAATGAACTGATCAAGGA...CAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCCAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CCCCCAAAGCCAAGTGTCCTGAGCTCTGGGCTGTTGGCCCACCCTCAGCAGTCCTGTGCTGTGTTTGGCTaGACGATATCCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: PPKPSVLSSGLLAHPQQSCAVFG*TISCTW
Trigger: CCAGGTGCAGGATATCGTCAAGCCAAACACAGCACA...GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAGGACACTTGGCTTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGCGGCTGTTCTCGGCCTaGAACTCGGAGCACTTCCCA +
Preference number: 5 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQRLFSA*NSEHFP
Trigger: TGGGAAGTGCTCCGAGTTCAAGGCCGAGAACAGCCG...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp TGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCGCTCTTAGCCAAAACTaGCTGGGTGACCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: WGLQHHLPGQHRSNVVVCALSQN*LGDPWP
Trigger: TGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC...GCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCTGCCTCAAGGCCTGGACTaGAGGGCAGCTTCAATCCAT +
Preference number: 5 (lower is better)
Translates to: ALGHTAGAGGQALSQNLLPQGLD*RAASIH
Trigger: ATGGATTGAAGCTGCCCTCAAGTCCAGGCCTTGAGG...CAGCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS TCA 90 bp GAGGGTCCAGAGTCCAGGAGTCTTGTGTGCGTGGGAGGAAGAGTGTaGAGAGCCACCAAGCACAGGGGAAGATGCCCCATCACTGGCCAT +
Preference number: 5 (lower is better)
Translates to: EGPESRSLVCVGGRV*RATKHRGRCPITGH
Trigger: ATGGCCAGTGATGGGGCATCTTCCCCTGTGCTTGGTGGCTCTTCACACTCTTCCTCCCACGCACACAAGACTCCTGGACTCTGGACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488407.1
CDS-3UTR CAA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTTGGGTCCTGGAGGGGTaGAGGACCCCCTGCCTGACT +
Preference number: 5 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQAWVLEG*RTPCLT
Trigger: AGTCAGGCAGGGGGTCCTCAACCCCTCCAGGACCCA...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATATCCCGCTGTCCCGGTaGGGGATCTTTAAGCTACCA +
Preference number: 5 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYIPLSR*GIFKLP
Trigger: TGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGAT...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGGCGGGGTGGAATCCCGCTGTCCCGGTaGGGGATCTTTAAGCTACCA +
Preference number: 5 (lower is better)
Translates to: QVTIQLTRCRQAGQRRGGIPLSR*GIFKLP
Trigger: TGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGAT...TCCACCCCGCCTCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGAGCAGCATTGGAGTGGTaGGCGGCTGTGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRAALEW*AAVEMS
Trigger: GCTCATCTCCACAGCCGCCAACCACTCCAATGCTGC...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGTGCTGTGTTTGGCTaGACGATATCCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: VPMLPLSAFRASITTRPICAVFG*TISCTW
Trigger: CCAGGTGCAGGATATCGTCAAGCCAAACACAGCACA...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CCTGGCTGGTCCCGAGAAGCCAGCGTGCACACACGGGATCTTCCGAGTGTGTTCTGTGCTGTGTTTGGCTaGACGATATCCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: PGWSREASVHTRDLPSVFCAVFG*TISCTW
Trigger: CCAGGTGCAGGATATCGTCAAGCCAAACACAGCACA...GAACACACTCGGAAGATCCCGTGTGTGCACGCTGGCTTCTCGGGACCAGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CAA 90 bp CCTGGATGCAAATGGTTCCCAAGCCTTGGCCCTGGCTGGTCCCGAGAAGCCAGCGTTTCGCTGTTCTGTTaGTGCTTCTCGATGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PGCKWFPSLGPGWSREASVSLFC*CFSMVA
Trigger: GGCCACCATCGAGAAGCACAAACAGAACAGCGAAAC...GCTGGCTTCTCGGGACCAGCCAGGGCCAAGGCTTGGGAACCATTTGCATCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CAA 90 bp CTGCTCTGGGCCACACTGCTGGGGCTGGAGGCCAGGCTCTTAGCCAAAACTTGCGCGCCACCAAAAGCCTaGAAGGTTTCGCTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: LLWATLLGLEARLLAKTCAPPKA*KVSLFC
Trigger: ACAGAACAGCGAAACCTTCAAGGCTTTTGGTGGCGC...GCAAGTTTTGGCTAAGAGCCTGGCCTCCAGCCCCAGCAGTGTGGCCCAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATACAGCTCTGCTTCTCCTaGTCACGTCTGGTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: VPMLPLSAFRASITTRPIQLCFS*SRLVLE
Trigger: CTCTAAGACCAGACGTGACAAGGAGAAGCAGAGCTG...TATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp TGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCCAGCTCTGCTTCTCCTaGTCACGTCTGGTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: WGLQHHLPGQHRSNVVVCQLCFS*SRLVLE
Trigger: CTCTAAGACCAGACGTGACAAGGAGAAGCAGAGCTG...GCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp TCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGGCTCTTAGCCAAAACTaGCTGGGTGACCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: SNTTSQDSTGPMWWCAGQALSQN*LGDPWP
Trigger: TGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC...CTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGCTCTTAGCCAAAACTaGCTGGGTGACCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYALSQN*LGDPWP
Trigger: TGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGAGGCAAACTCGATACTaGCCGGAGCCGCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWRQTRY*PEPLPE
Trigger: CTCTGGAAGCGGCTCCGGCAAGTATCGAGTTTGCCT...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375482.8
CDS-3UTR CAA 90 bp GGGCAGAGGCGGGGTGGACCACGCTGCAGACCAGCAGGATGTGGCTGTCCCTGGAACATGATGGTGCATTaGCATTTCCGCATCATTACG +
Preference number: 5 (lower is better)
Translates to: GQRRGGPRCRPAGCGCPWNMMVH*HFRIIT
Trigger: CGTAATGATGCGGAAATGCAAATGCACCATCATGTT...CCAGGGACAGCCACATCCTGCTGGTCTGCAGCGTGGTCCACCCCGCCTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR CAA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGATGGGTCCTGGAGGGGTaGAGGACCCCCTGCCTGACT +
Preference number: 5 (lower is better)
Translates to: HSVAGVSPSRASERGYLGWVLEG*RTPCLT
Trigger: AGTCAGGCAGGGGGTCCTCAACCCCTCCAGGACCCA...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACGCAGCATTGGAGTGGTaGGCGGCTGTGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: SERGYLGTMSPARMGQAHAALEW*AAVEMS
Trigger: GCTCATCTCCACAGCCGCCAACCACTCCAATGCTGC...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGTTCCGAATGGCAGCATaGGAGTGGTTGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLFRMAA*EWLAAV
Trigger: CACAGCCGCCAACCACTCCAATGCTGCCATTCGGAA...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp TCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCAGTGGGAGACTCAGGTTTCGCTGTTCTGTTaGTGCTTCTCGATGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SQDSTGPMWWCAGQWETQVSLFC*CFSMVA
Trigger: GGCCACCATCGAGAAGCACAAACAGAACAGCGAAAC...CTGAGTCTCCCACTGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCTCTTGGTGATGGAGTaGAAGGTCTCACCACAGCTC +
Preference number: 5 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVLLVME*KVSPQL
Trigger: GAGCTGTGGTGAGACCTTCAACTCCATCACCAAGAG...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCACTCTTGGTGATGGAGTaGAAGGTCTCACCACAGCTC +
Preference number: 5 (lower is better)
Translates to: LQHHLPGQHRSNVVVCRALLVME*KVSPQL
Trigger: GAGCTGTGGTGAGACCTTCAACTCCATCACCAAGAG...TGCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGTCCGGCACACTCAGTTaGCAGCTGGGGAGAGGGATG +
Preference number: 5 (lower is better)
Translates to: LCATSIRNSHKSHAPATQSGTLS*QLGRGM
Trigger: CATCCCTCTCCCCAGCTGCAAACTGAGTGTGCCGGA...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTTCCGGCACACTCAGTTaGCAGCTGGGGAGAGGGATG +
Preference number: 5 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSSGTLS*QLGRGM
Trigger: CATCCCTCTCCCCAGCTGCAAACTGAGTGTGCCGGA...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTCTGGTGGATGATGGTTACTTaGGCAGTCGGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ALSQNLLGDPWPVVAPLWWMMVT*AVGPCS
Trigger: AGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCA...CCAGAGAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS CCA 90 bp GTGCTCGTGATAGGCATGTCTGGAGAGAGGCTGGGGTCCTCATCCTaGCTGAAGGCGCCACCAAAAGCCTTGAAGGTTTCGCTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: VLVIGMSGERLGSSS*LKAPPKALKVSLFC
Trigger: ACAGAACAGCGAAACCTTCAAGGCTTTTGGTGGCGCCTTCAGCCAGGATGAGGACCCCAGCCTCTCTCCAGACATGCCTATCACGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTCTGGCCCTGGCTGCCTaGAGCCTGCCCTGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: VSPSRASERGYLGTMSPALALAA*SLPWLP
Trigger: AGGCAACCAGGGCAGGCTCAAGGCAGCCAGGGCCAG...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR CAA 90 bp GGCTGTCCCTGGCAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCATACACCTCCAAGAGCTaGTGCATTTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: GCPWQCPCCLFLPSGPASYTSKS*CIFSTF
Trigger: GAAAGTGGAGAAAATGCACAAGCTCTTGGAGGTGTA...TGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTGCCAGGGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CAGTGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATACACCTCCAAGAGCTaGTGCATTTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: QCPCCLFLPSGPASPHGPYTSKS*CIFSTF
Trigger: GAAAGTGGAGAAAATGCACAAGCTCTTGGAGGTGTA...TGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGCAGGGCTCCTTGATCAGTTCATaGGCCGGGTTGACAATGTCT +
Preference number: 5 (lower is better)
Translates to: PPTPPPRTAQVQCGGVQGSLISS*AGLTMS
Trigger: AGACATTGTCAACCCGGCCAATGAACTGATCAAGGA...GCCCTGCACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp TCATGCGCCTGCCACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTTGTGCTGTGTTTGGCTaGACGATATCCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: SCACHSVAGVSPSRASERCAVFG*TISCTW
Trigger: CCAGGTGCAGGATATCGTCAAGCCAAACACAGCACA...ACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTGGCAGGCGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGGTTTCGCTGTTCTGTTaGTGCTTCTCGATGGTGGCC +
Preference number: 5 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQVSLFC*CFSMVA
Trigger: GGCCACCATCGAGAAGCACAAACAGAACAGCGAAAC...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATCAGCTCTGCTTCTCCTaGTCACGTCTGGTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: HAASFCLPGQHHHTAHMDQLCFS*SRLVLE
Trigger: CTCTAAGACCAGACGTGACAAGGAGAAGCAGAGCTG...ATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTTCCGGCACACTCAGTTaGCAGCTGGGGAGAGGGATG +
Preference number: 5 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQASGTLS*QLGRGM
Trigger: CATCCCTCTCCCCAGCTGCAAACTGAGTGTGCCGGA...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp TCACGGGACAGGGACTTCAAGCGTGTCAGTTCTACACACACCATATACATGCACCTGAGCTCTGGGCTGTaGGCCCACCCTCAGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SRDRDFKRVSSTHTIYMHLSSGL*AHPQQS
Trigger: GGACTGCTGAGGGTGGGCCAACAGCCCAGAGCTCAG...GTGCATGTATATGGTGTGTGTAGAACTGACACGCTTGAAGTCCCTGTCCCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS GCA 90 bp AGAAGGTGCAACTTGCAGGGTGGCGGGGGCAATGGCAAACAAACATaGAATCCACAGCTCTCCACTGATCAGGTGCTAGGCTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: RRCNLQGGGGNGKQT*NPQLSTDQVLGSQL
Trigger: CAGCTGTGAGCCTAGCACCTGATCAGTGGAGAGCTGTGGATTGCATGTTTGTTTGCCATTGCCCCCGCCACCCTGCAAGTTGCACCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS CCA 90 bp TGGTGCATTTGCATTTCCGCATCATTACGCTGGGTGAGAGGAGCTTaGCTTGCTGATTCTAGAAGGTGCAACTTGCAGGGTGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: WCICISASLRWVRGA*LADSRRCNLQGGGG
Trigger: GCCCCCGCCACCCTGCAAGTTGCACCTTCTAGAATCAGCAAGCCAAGCTCCTCTCACCCAGCGTAATGATGCGGAAATGCAAATGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR CAA 90 bp GAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTTTGGCCGGCAGGAGCTaGCACACGGTAGATGGTTTC +
Preference number: 5 (lower is better)
Translates to: EKGGGKQVTIQLTRCRQALAGRS*HTVDGF
Trigger: GAAACCATCTACCGTGTGCAAGCTCCTGCCGGCCAA...AGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTTGGGTCCTGGAGGGGTaGAGGACCCCCTGCCTGACT +
Preference number: 5 (lower is better)
Translates to: VSPSRASERGYLGTMSPAWVLEG*RTPCLT
Trigger: AGTCAGGCAGGGGGTCCTCAACCCCTCCAGGACCCA...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp ATGGGGCCTCCAACACCACCTCCCAGGACAGCACAGGTCCAATGTGGTGGTGTGTCCTTGATCAGTTCATaGGCCGGGTTGACAATGTCT +
Preference number: 5 (lower is better)
Translates to: MGPPTPPPRTAQVQCGGVSLISS*AGLTMS
Trigger: AGACATTGTCAACCCGGCCAATGAACTGATCAAGGA...CACACCACCACATTGGACCTGTGCTGTCCTGGGAGGTGGTGTTGGAGGCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGTGTGCTGTGTTTGGCTaGACGATATCCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: QHHHTAHMDDGYFGSRPLCAVFG*TISCTW
Trigger: CCAGGTGCAGGATATCGTCAAGCCAAACACAGCACA...CAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp AGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCGGCCCCTGCGCGCCACCAAAAGCCTaGAAGGTTTCGCTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: SITTRPIWMMVTLAVGPCAPPKA*KVSLFC
Trigger: ACAGAACAGCGAAACCTTCAAGGCTTTTGGTGGCGC...GCAGGGGCCGACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGACAGCTCTGCTTCTCCTaGTCACGTCTGGTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: EVGSKSRFSSHGVDRLGRQLCFS*SRLVLE
Trigger: CTCTAAGACCAGACGTGACAAGGAGAAGCAGAGCTG...TCTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTGCTCTTAGCCAAAACTaGCTGGGTGACCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSALSQN*LGDPWP
Trigger: TGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGC...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTTGGATGATGGTTACTTaGGCAGTCGGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSWMMVT*AVGPCS
Trigger: AGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCA...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATTCTGTCATGTCACTGTaGGAGCTACTGTCCACCATT +
Preference number: 5 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYSVMSL*ELLSTI
Trigger: AATGGTGGACAGTAGCTCCAACAGTGACATGACAGA...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CAA 90 bp TGCCCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATATGCTCCTGCCTCACTaGCTAAGCGAAATAAAGAAG +
Preference number: 5 (lower is better)
Translates to: CPCCLFLPSGPASPHGPYMLLPH*LSEIKK
Trigger: CTTCTTTATTTCGCTTAGCAAGTGAGGCAGGAGCAT...ATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS-3UTR CAA 90 bp ACAGAGAAAGGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGTTGGCCGGCAGGAGCTaGCACACGGTAGATGGTTTC +
Preference number: 5 (lower is better)
Translates to: TEKGGGKQVTIQLTRCRQLAGRS*HTVDGF
Trigger: GAAACCATCTACCGTGTGCAAGCTCCTGCCGGCCAA...CTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCCTTTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp AAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCAATCCCGCTGTCCCGGTaGGGGATCTTTAAGCTACCA +
Preference number: 5 (lower is better)
Translates to: KHCVPLASGTATNLMRLPIPLSR*GIFKLP
Trigger: TGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGAT...TGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGATTCCGAATGGCAGCATaGGAGTGGTTGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: HSVAGVSPSRASERGYLGFRMAA*EWLAAV
Trigger: CACAGCCGCCAACCACTCCAATGCTGCCATTCGGAA...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CCATGCTGCCTCTTTCTGCCTTCCGGGCCAGCATCACCACACGGCCCATATGGATACACCTCCAAGAGCTaGTGCATTTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: PCCLFLPSGPASPHGPYGYTSKS*CIFSTF
Trigger: GAAAGTGGAGAAAATGCACAAGCTCTTGGAGGTGTA...TCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAGGCAGAAAGAGGCAGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GCCAGGCTCTTAGCCAAAACTTGCTGGGTGACCCTTGGCCAGTGGTTGCCCCTCTACACCTCCAAGAGCTaGTGCATTTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: ARLLAKTCWVTLGQWLPLYTSKS*CIFSTF
Trigger: GAAAGTGGAGAAAATGCACAAGCTCTTGGAGGTGTA...GAGGGGCAACCACTGGCCAAGGGTCACCCAGCAAGTTTTGGCTAAGAGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GGAGGTGGGAAGCAAGTCACGATTCAGCTCACACGGTGTAGACAGGCTGGGCAGTCCTTGATCAGTTCATaGGCCGGGTTGACAATGTCT +
Preference number: 5 (lower is better)
Translates to: GGGKQVTIQLTRCRQAGQSLISS*AGLTMS
Trigger: AGACATTGTCAACCCGGCCAATGAACTGATCAAGGA...CTGCCCAGCCTGTCTACACCGTGTGAGCTGAATCGTGACTTGCTTCCCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp TCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTAGGATGGGGCAGGCCCACGCGCCACCAAAAGCCTaGAAGGTTTCGCTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: SERGYLGTMSPARMGQAHAPPKA*KVSLFC
Trigger: ACAGAACAGCGAAACCTTCAAGGCTTTTGGTGGCGC...GTGGGCCTGCCCCATCCTAGCTGGACTCATGGTTCCTAAATAACCACGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCAGCTCTGCTTCTCCTaGTCACGTCTGGTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSQLCFS*SRLVLE
Trigger: CTCTAAGACCAGACGTGACAAGGAGAAGCAGAGCTG...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CTTCCGGGCCAGCATCACCACACGGCCCATATGGATGATGGTTACTTTGGCAGTCTCTTGGTGATGGAGTaGAAGGTCTCACCACAGCTC +
Preference number: 5 (lower is better)
Translates to: LPGQHHHTAHMDDGYFGSLLVME*KVSPQL
Trigger: GAGCTGTGGTGAGACCTTCAACTCCATCACCAAGAG...ACTGCCAAAGTAACCATCATCCATATGGGCCGTGTGGTGATGCTGGCCCGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GCAGATAAGCACTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCTGGATGATGGTTACTTaGGCAGTCGGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ADKHCVPLASGTATNLMRWMMVT*AVGPCS
Trigger: AGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCA...GCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAGTGCTTATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS GCA 90 bp TCATTACGCTGGGTGAGAGGAGCTTGGCTTGCTGATTCTAGAAGGTaGAACTTGCAGGGTGGCGGGGGCAATGGCAAACAAACATGCAAT +
Preference number: 5 (lower is better)
Translates to: SLRWVRGAWLADSRR*NLQGGGGNGKQTCN
Trigger: ATTGCATGTTTGTTTGCCATTGCCCCCGCCACCCTGCAAGTTGCACCTTCTAGAATCAGCAAGCCAAGCTCCTCTCACCCAGCGTAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS-3UTR CAA 90 bp CACTCAGTGGCTGGGGTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAGTTTCGCTGTTCTGTTaGTGCTTCTCGATGGTGGCC +
Preference number: 5 (lower is better)
Translates to: HSVAGVSPSRASERGYLGVSLFC*CFSMVA
Trigger: GGCCACCATCGAGAAGCACAAACAGAACAGCGAAAC...TCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTACCCCAGCCACTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp CTGTGTGCCACTAGCATCAGGAACAGCCACAAATCTCATGCGCCTGCCACTCAGTACACCTCCAAGAGCTaGTGCATTTTCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: LCATSIRNSHKSHAPATQYTSKS*CIFSTF
Trigger: GAAAGTGGAGAAAATGCACAAGCTCTTGGAGGTGTA...CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTTGGATGATGGTTACTTaGGCAGTCGGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VSPSRASERGYLGTMSPAWMMVT*AVGPCS
Trigger: AGAGCAGGGGCCGACTGCCAAAGTAACCATCATCCA...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS GCA 90 bp CTCTTGGTGATGGAGTTGAAGGTCTCACCACAGCTCTTACAGCTCTaGTTCTCCTTGTCACGTCTGGTCTTAGAGGATAGTTTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LLVMELKVSPQLLQL*FSLSRLVLEDSFLG
Trigger: GCCCAGAAAACTATCCTCTAAGACCAGACGTGACAAGGAGAAGCAGAGCTGTAAGAGCTGTGGTGAGACCTTCAACTCCATCACCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000488407.1
CDS-3UTR CAA 90 bp CCTCTGTCATGTCACTGTTGGAGCTACTGTCCACCATTTGGACGTGGCTTAGACTCCTTGATCAGTTCATaGGCCGGGTTGACAATGTCT +
Preference number: 5 (lower is better)
Translates to: PLSCHCWSYCPPFGRGLDSLISS*AGLTMS
Trigger: AGACATTGTCAACCCGGCCAATGAACTGATCAAGGA...GTCTAAGCCACGTCCAAATGGTGGACAGTAGCTCCAACAGTGACATGACAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS-3UTR CAA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTGTTTCGCTGTTCTGTTaGTGCTTCTCGATGGTGGCC +
Preference number: 5 (lower is better)
Translates to: VSPSRASERGYLGTMSPAVSLFC*CFSMVA
Trigger: GGCCACCATCGAGAAGCACAAACAGAACAGCGAAAC...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS-3UTR CAA 90 bp GTAAGTCCTAGCAGAGCTTCTGAGCGTGGTTATTTAGGAACCATGAGTCCAGCTGCGCCACCAAAAGCCTaGAAGGTTTCGCTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: VSPSRASERGYLGTMSPAAPPKA*KVSLFC
Trigger: ACAGAACAGCGAAACCTTCAAGGCTTTTGGTGGCGC...AGCTGGACTCATGGTTCCTAAATAACCACGCTCAGAAGCTCTGCTAGGACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS TCA 90 bp TCACAACATGATGGTGCATTTGCATTTCCGCATCATTACGCTGGGTaGGAGGAGCTTGGCTTGCTGATTCTAGAAGGTGCAACTTGCAGG +
Preference number: 5 (lower is better)
Translates to: SQHDGAFAFPHHYAG*EELGLLILEGATCR
Trigger: CCTGCAAGTTGCACCTTCTAGAATCAGCAAGCCAAGCTCCTCTCACCCAGCGTAATGATGCGGAAATGCAAATGCACCATCATGTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS GCA 72 bp GGTGACCTTCGGGACCTGGCTGTCCAGGGCCATCTCTaGGTGCGCCCCCAGTACAGTGGGGCTTGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: GDLRDLAVQGHL*VRPQYSGAWAS
Trigger: GCTGGCCCAAGCCCCACTGTACTGGGGGCGCACGCAGAGATGGCCCTGGACAGCCAGGTCCCGAAGGTCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS CCA 72 bp GCGCAGGCCTGGGCTCTGGCAGCGTCCTGGTGGCTGTaGATGCCGACCAGCTCTATGGTGGAGCACCCCCAC +
Preference number: 6 (lower is better)
Translates to: AQAWALAASWWL*MPTSSMVEHPH
Trigger: GTGGGGGTGCTCCACCATAGAGCTGGTCGGCATCCACAGCCACCAGGACGCTGCCAGAGCCCAGGCCTGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337352.10
ENST00000494669.2
CDS CCA 72 bp TGTCCAGGGCCATCTCTGCGTGCGCCCCCAGTACAGTaGGGCTTGGGCCAGCCTCCAAGCCCTCCTCGCAGG +
Preference number: 6 (lower is better)
Translates to: CPGPSLRAPPVQ*GLGQPPSPPRR
Trigger: CCTGCGAGGAGGGCTTGGAGGCTGGCCCAAGCCCCACTGTACTGGGGGCGCACGCAGAGATGGCCCTGGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS CCA 72 bp GAGTGCTGGGCCAGGCCGGCATCCTTGTCAGCCTTCTaGGGGGTGTTCTCAGAGTCAGGTTCCTCACCCACG +
Preference number: 6 (lower is better)
Translates to: ECWARPASLSAF*GVFSESGSSPT
Trigger: CGTGGGTGAGGAACCTGACTCTGAGAACACCCCCCAGAAGGCTGACAAGGATGCCGGCCTGGCCCAGCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS CCA 72 bp CCTGGGGGCCCCACTGAGACACACCCACATCTATCCTaGTCCCAGGGACACTCCGAAAGCAGAGGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: PGGPTETHPHLS*SQGHSESRGSW
Trigger: CCAGCTGCCTCTGCTTTCGGAGTGTCCCTGGGACCAGGATAGATGTGGGTGTGTCTCAGTGGGGCCCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS GCA 72 bp ATAGTTTTCTGGGCTCGAGCCCTGCTGCACCCGAACTaGCTTCGGTGGTCACCACAGGCTCCACAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: IVFWARALLHPN*LRWSPQAPQGW
Trigger: CCAGCCCTGTGGAGCCTGTGGTGACCACCGAAGGCAGTTCGGGTGCAGCAGGGCTCGAGCCCAGAAAACTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS CCA 72 bp CAGCGTCCTGGTGGCTGTGGATGCCGACCAGCTCTATaGTGGAGCACCCCCACCACACACAGTCTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: QRPGGCGCRPAL*WSTPTTHSLLS
Trigger: ACTCAGGAGACTGTGTGTGGTGGGGGTGCTCCACCATAGAGCTGGTCGGCATCCACAGCCACCAGGACGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337352.10
CDS CCA 72 bp GACTCCATCCTTAAAGCTGAGCTCACTGGGCTCAGGTaGAGGCTGGCCAGGGGCTTCCTGATGCCACCAGCC +
Preference number: 6 (lower is better)
Translates to: DSILKAELTGLR*RLARGFLMPPA
Trigger: GGCTGGTGGCATCAGGAAGCCCCTGGCCAGCCTCCACCTGAGCCCAGTGAGCTCAGCTTTAAGGATGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS CAA 90 bp GCCCAGTGTCTGGCATCCCTAGGGCAGCAATGGGTCCTGGAGGGGTaGAGGACCCCCTGCCTGACTCCATCCTTAAAGCTGAGCTCACTG +
Preference number: 6 (lower is better)
Translates to: AQCLASLGQQWVLEG*RTPCLTPSLKLSSL
Trigger: CAGTGAGCTCAGCTTTAAGGATGGAGTCAGGCAGGGGGTCCTCAACCCCTCCAGGACCCATTGCTGCCCTAGGGATGCCAGACACTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS CAA 90 bp TCTCCAGCCACACTGGAGGAGGGACTGTCGATCCCGCTGTCCCGGTaGGGGATCTTTAAGCTACCACTCAGCTCTCCCGTGGGGCCTATG +
Preference number: 6 (lower is better)
Translates to: SPATLEEGLSIPLSR*GIFKLPLSSPVGPM
Trigger: CATAGGCCCCACGGGAGAGCTGAGTGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGATCGACAGTCCCTCCTCCAGTGTGGCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS TCA 72 bp GATCTTCCGAGTGTGTTCCCAGCCTGGGGGCCCCACTaGGACACACCCACATCTATCCTGGTCCCAGGGACA +
Preference number: 6 (lower is better)
Translates to: DLPSVFPAWGPH*DTPTSILVPGT
Trigger: TGTCCCTGGGACCAGGATAGATGTGGGTGTGTCTCAGTGGGGCCCCCAGGCTGGGAACACACTCGGAAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467786.1
CDS CCA 72 bp GGTTGGGGATCTTTAAGCTACCACTCAGCTCTCCCGTaGGGCCTATGTCTGGAGAGCCGTCCCCTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GWGSLSYHSALP*GLCLESRPLLQ
Trigger: CTGCAGCAGGGGACGGCTCTCCAGACATAGGCCCCACGGGAGAGCTGAGTGGTAGCTTAAAGATCCCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS CCA 72 bp CACTGGAGGAGGGACTGTCGATCCCGCTGTCCCGGTTaGGGATCTTTAAGCTACCACTCAGCTCTCCCGTGG +
Preference number: 6 (lower is better)
Translates to: HWRRDCRSRCPG*GSLSYHSALPW
Trigger: CCACGGGAGAGCTGAGTGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGATCGACAGTCCCTCCTCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS CCA 72 bp ATGCTGTGGACGACGTCTTTAAACAGTGGGGAGCGCTaGGTCCACGTGCTCACCAGCCCTACGGCTCGGTCA +
Preference number: 6 (lower is better)
Translates to: MLWTTSLNSGER*VHVLTSPTARS
Trigger: TGACCGAGCCGTAGGGCTGGTGAGCACGTGGACCCAGCGCTCCCCACTGTTTAAAGACGTCGTCCACAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS CCA 72 bp GATGAGCTCCAAGGACCTCTCCGCATCCTTCCGGTCTaGGGCGTCCTGCGGGAGCCTCTTCAGATAGTCCTT +
Preference number: 6 (lower is better)
Translates to: DELQGPLRILPV*GVLREPLQIVL
Trigger: AAGGACTATCTGAAGAGGCTCCCGCAGGACGCCCCAGACCGGAAGGATGCGGAGAGGTCCTTGGAGCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS CAA 72 bp CTGGCATCCCTAGGGCAGCAATGGGTCCTGGAGGGGTaGAGGACCCCCTGCCTGACTCCATCCTTAAAGCTG +
Preference number: 6 (lower is better)
Translates to: LASLGQQWVLEG*RTPCLTPSLKL
Trigger: CAGCTTTAAGGATGGAGTCAGGCAGGGGGTCCTCAACCCCTCCAGGACCCATTGCTGCCCTAGGGATGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS CCA 72 bp CTGCTTCTGGATGCTGTGGACGACGTCTTTAAACAGTaGGGAGCGCTGGGTCCACGTGCTCACCAGCCCTAC +
Preference number: 6 (lower is better)
Translates to: LLLDAVDDVFKQ*GALGPRAHQPY
Trigger: GTAGGGCTGGTGAGCACGTGGACCCAGCGCTCCCCACTGTTTAAAGACGTCGTCCACAGCATCCAGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS CAA 72 bp ACACTGGAGGAGGGACTGTCGATCCCGCTGTCCCGGTaGGGGATCTTTAAGCTACCACTCAGCTCTCCCGTG +
Preference number: 6 (lower is better)
Translates to: TLEEGLSIPLSR*GIFKLPLSSPV
Trigger: CACGGGAGAGCTGAGTGGTAGCTTAAAGATCCCCAACCGGGACAGCGGGATCGACAGTCCCTCCTCCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000494669.2
CDS TCA 72 bp CTCACCCCTCAGCATGGCGCCCCACACAGCTTGCAGTaGTGCCTCCTCTTGGTGATGGAGTTGAAGGTCTCA +
Preference number: 6 (lower is better)
Translates to: LTPQHGAPHSLQ*CLLLVMELKVS
Trigger: TGAGACCTTCAACTCCATCACCAAGAGGAGGCATCACTGCAAGCTGTGTGGGGCGCCATGCTGAGGGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488407.1
CDS TCA 72 bp GAGTCCAGGAGTCTTGTGTGCGTGGGAGGAAGAGTGTaGAGAGCCACCAAGCACAGGGGAAGATGCCCCATC +
Preference number: 6 (lower is better)
Translates to: ESRSLVCVGGRV*RATKHRGRCPI
Trigger: GATGGGGCATCTTCCCCTGTGCTTGGTGGCTCTTCACACTCTTCCTCCCACGCACACAAGACTCCTGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488407.1
CDS CAA 72 bp ACCCTTCTGTCCTGGAGGGTCCAGAGTCCAGGAGTCTaGTGTGCGTGGGAGGAAGAGTGTGAAGAGCCACCA +
Preference number: 6 (lower is better)
Translates to: TLLSWRVQSPGV*CAWEEECEEPP
Trigger: TGGTGGCTCTTCACACTCTTCCTCCCACGCACACAAGACTCCTGGACTCTGGACCCTCCAGGACAGAAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488407.1
CDS TCA 72 bp CAATGGCAAACAAACATGCAATCCACAGCTCTCCACTaGTCAGGTGCTAGGCTCACAGCTGCGGCGGCCGTG +
Preference number: 6 (lower is better)
Translates to: QWQTNMQSTALH*SGARLTAAAAV
Trigger: CACGGCCGCCGCAGCTGTGAGCCTAGCACCTGATCAGTGGAGAGCTGTGGATTGCATGTTTGTTTGCCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS CCA 72 bp ATAGGCATGTCTGGAGAGAGGCTGGGGTCCTCATCCTaGCTGAAGGCGCCACCAAAAGCCTTGAAGGTTTCG +
Preference number: 6 (lower is better)
Translates to: IGMSGERLGSSS*LKAPPKALKVS
Trigger: CGAAACCTTCAAGGCTTTTGGTGGCGCCTTCAGCCAGGATGAGGACCCCAGCCTCTCTCCAGACATGCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS CAA 90 bp CGCTGGGTGAGAGGAGCTTGGCTTGCTGATTCTAGAAGGTGCAACTaGCAGGGTGGCGGGGGCAATGGCAAACAAACATGCAATCCACAG +
Preference number: 6 (lower is better)
Translates to: RWVRGAWLADSRRCN*QGGGGNGKQTCNPQ
Trigger: CTGTGGATTGCATGTTTGTTTGCCATTGCCCCCGCCACCCTGCAAGTTGCACCTTCTAGAATCAGCAAGCCAAGCTCCTCTCACCCAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS TCA 72 bp CACTTCCCACAGATGACCGCCCCACACAGCTTGCAGTaGTGCCTCCTCTTGGTGATGGAGTTGAAGGTCTCA +
Preference number: 6 (lower is better)
Translates to: HFPQMTAPHSLQ*CLLLVMELKVS
Trigger: TGAGACCTTCAACTCCATCACCAAGAGGAGGCATCACTGCAAGCTGTGTGGGGCGGTCATCTGTGGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS GCA 72 bp AACTTGCAGGGTGGCGGGGGCAATGGCAAACAAACATaGAATCCACAGCTCTCCACTGATCAGGTGCTAGGC +
Preference number: 6 (lower is better)
Translates to: NLQGGGGNGKQT*NPQLSTDQVLG
Trigger: GCCTAGCACCTGATCAGTGGAGAGCTGTGGATTGCATGTTTGTTTGCCATTGCCCCCGCCACCCTGCAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS GCA 72 bp GAGGAGCTTGGCTTGCTGATTCTAGAAGGTGCAACTTaGAGGGTGGCGGGGGCAATGGCAAACAAACATGCA +
Preference number: 6 (lower is better)
Translates to: EELGLLILEGAT*RVAGAMANKHA
Trigger: TGCATGTTTGTTTGCCATTGCCCCCGCCACCCTGCAAGTTGCACCTTCTAGAATCAGCAAGCCAAGCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS CAA 72 bp AGCTTGTGCATTTTCTCCACTTTCCGAATGGCAGCATaGGAGTGGTTGGCGGCTGTGGAGATGAGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: SLCIFSTFRMAA*EWLAAVEMSSK
Trigger: CTTGGAGCTCATCTCCACAGCCGCCAACCACTCCAATGCTGCCATTCGGAAAGTGGAGAAAATGCACAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS CAA 90 bp ATGGAGTTGAAGGTCTCACCACAGCTCTTACAGCTCTGCTTCTCCTaGTCACGTCTGGTCTTAGAGGATAGTTTTCTGGGCTCGAGCCCT +
Preference number: 6 (lower is better)
Translates to: MELKVSPQLLQLCFS*SRLVLEDSFLGSSP
Trigger: AGGGCTCGAGCCCAGAAAACTATCCTCTAAGACCAGACGTGACAAGGAGAAGCAGAGCTGTAAGAGCTGTGGTGAGACCTTCAACTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
CDS CCA 72 bp TGCATTTCCGCATCATTACGCTGGGTGAGAGGAGCTTaGCTTGCTGATTCTAGAAGGTGCAACTTGCAGGGT +
Preference number: 6 (lower is better)
Translates to: CISASLRWVRGA*LADSRRCNLQG
Trigger: ACCCTGCAAGTTGCACCTTCTAGAATCAGCAAGCCAAGCTCCTCTCACCCAGCGTAATGATGCGGAAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS TCA 72 bp GATGGTGCATTTGCATTTCCGCATCATTACGCTGGGTaGGAGGAGCTTGGCTTGCTGATTCTAGAAGGTGCA +
Preference number: 6 (lower is better)
Translates to: DGAFAFPHHYAG*EELGLLILEGA
Trigger: TGCACCTTCTAGAATCAGCAAGCCAAGCTCCTCTCACCCAGCGTAATGATGCGGAAATGCAAATGCACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS CCA 72 bp AGGTACTGTCTTCTGAAGGCGAGCGAGTTTCTCCTCTaGGCTGAACTTCGTGCAATAGCGAAACACAACTTC +
Preference number: 6 (lower is better)
Translates to: RYCLLKASEFLL*AELRAIAKHNF
Trigger: GAAGTTGTGTTTCGCTATTGCACGAAGTTCAGCCCAGAGGAGAAACTCGCTCGCCTTCAGAAGACAGTACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416701.6
CDS CAA 72 bp AAGGTCTCACCACAGCTCTTACAGCTCTGCTTCTCCTaGTCACGTCTGGTCTTAGAGGATAGTTTTCTGGGC +
Preference number: 6 (lower is better)
Translates to: KVSPQLLQLCFS*SRLVLEDSFLG
Trigger: GCCCAGAAAACTATCCTCTAAGACCAGACGTGACAAGGAGAAGCAGAGCTGTAAGAGCTGTGGTGAGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000488407.1
CDS GCA 72 bp ATGGAGTTGAAGGTCTCACCACAGCTCTTACAGCTCTaGTTCTCCTTGTCACGTCTGGTCTTAGAGGATAGT +
Preference number: 6 (lower is better)
Translates to: MELKVSPQLLQL*FSLSRLVLEDS
Trigger: ACTATCCTCTAAGACCAGACGTGACAAGGAGAAGCAGAGCTGTAAGAGCTGTGGTGAGACCTTCAACTCCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337352.10
ENST00000375482.8
ENST00000416701.6
ENST00000467786.1
ENST00000468206.6
ENST00000488407.1
CDS CAA 72 bp AATTTTCGCAATATGGGTCACAACATGATGGTGCATTaGCATTTCCGCATCATTACGCTGGGTGAGAGGAGC +
Preference number: 6 (lower is better)
Translates to: NFRNMGHNMMVH*HFRIITLGERS
Trigger: GCTCCTCTCACCCAGCGTAATGATGCGGAAATGCAAATGCACCATCATGTTGTGACCCATATTGCGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416701.6