RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FERMT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101311

Ensembl transcript IDs: ENST00000217289.9, ENST00000378844.1, ENST00000478194.1, ENST00000536936.1

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAACAGCTGACGCTCACGGGCCTCGGAACTCTGGCCAGGCTCCCTaGGGGGTGCATCCTAGGAGAACTGAAAAATGGGATTGGAGCTTT +
Preference number: 1 (lower is better)
Translates to: ATADAHGPRNSGQAP*GVHPRRTEKWDWSF
Trigger: AAAGCTCCAATCCCATTTTTCAGTTCTCCTAGGATGCACCCCTCAGGGAGCCTGGCCAGAGTTCCGAGGCCCGTGAGCGTCAGCTGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR GCA 90 bp GGAATTTCCAGATGGCAGCTACTGGCTCAGAACCAGGGGGTCCCTTaGCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCTCA +
Preference number: 1 (lower is better)
Translates to: GISRWQLLAQNQGVP*QVCLYVAPGIAEVS
Trigger: TGAGACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGAGCCAGTAGCTGCCATCTGGAAATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR TCA 90 bp TATGTGGCTCCCGGAATTGCTGAGGTCTCACTTCTCAGAGGGCTTTaGTGGAAAATAAAGCAACAGCTGACGCTCACGGGCCTCGGAACT +
Preference number: 1 (lower is better)
Translates to: YVAPGIAEVSLLRGL*WKIKQQLTLTGLGT
Trigger: AGTTCCGAGGCCCGTGAGCGTCAGCTGTTGCTTTATTTTCCATCAAAGCCCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR CCA 90 bp CTTCCTGAATCCCAACCCAGAGTAGAAGCAGTGGAGACATGGATCTaGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATC +
Preference number: 1 (lower is better)
Translates to: LPESQPRVEAVETWI*VEKWVFLSPCVTHI
Trigger: GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGTCTCCACTGCTTCTACTCTGGGTTGGGATTCAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR CCA 90 bp ACCTCTAAGGAGAGGCTAAAAGAGGAATTTCCAGATGGCAGCTACTaGCTCAGAACCAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGG +
Preference number: 1 (lower is better)
Translates to: TSKERLKEEFPDGSY*LRTRGSLAKSVSMW
Trigger: CCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGAGCCAGTAGCTGCCATCTGGAAATTCCTCTTTTAGCCTCTCCTTAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR TCA 90 bp ACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTaGATCCCAACCCAGAGTAGAAGCAGTGGAGACATGGATCTGGGT +
Preference number: 1 (lower is better)
Translates to: TGRCFYEQRGLCLSS*IPTQSRSSGDMDLG
Trigger: ACCCAGATCCATGTCTCCACTGCTTCTACTCTGGGTTGGGATTCAGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR TCA 90 bp GGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTaGGGTCTCACTTCTCAGAGGGCTTTGATGGAAAATAAAGCAACA +
Preference number: 1 (lower is better)
Translates to: GGPLPSLSLCGSRNC*GLTSQRALMENKAT
Trigger: TGTTGCTTTATTTTCCATCAAAGCCCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR TCA 90 bp GTAGCACAGGGCAAAGTAAGGAAAGGGATGTGCCAGCAGTGGGTTTaGATGAGGATCTGGGTGACCAGCGGTGAATGTATGTTGTCTGTT +
Preference number: 1 (lower is better)
Translates to: VAQGKVRKGMCQQWV*MRIWVTSGECMLSV
Trigger: AACAGACAACATACATTCACCGCTGGTCACCCAGATCCTCATTCAAACCCACTGCTGGCACATCCCTTTCCTTACTTTGCCCTGTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR GCA 90 bp CAGATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTaGAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATC +
Preference number: 1 (lower is better)
Translates to: QISTRITCSHTPGRF*KSENCNHMLGLRAI
Trigger: GATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR CCA 90 bp CCACTTCTGAGCTTTAAGCAAGGCCTCAGAAATTCAGCGGGTGCCTaGGAGGCTTCATTCACATTCACCTCTAAGGAGAGGCTAAAAGAG +
Preference number: 1 (lower is better)
Translates to: PLLSFKQGLRNSAGA*EASFTFTSKERLKE
Trigger: CTCTTTTAGCCTCTCCTTAGAGGTGAATGTGAATGAAGCCTCCCAGGCACCCGCTGAATTTCTGAGGCCTTGCTTAAAGCTCAGAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR CCA 90 bp CAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCCGGGCCTCGGAACTCTaGCCAGGCTCCCTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: QGVPCQVCLYVAPGIAEVRASEL*PGSLRG
Trigger: ACCCCTCAGGGAGCCTGGCCAGAGTTCCGAGGCCCG...GACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR GCA 90 bp ACTGGCTCAGAACCAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGGGGGCGCCTTTGGCTTaGCTTGTTGGTGTGAGCCGA +
Preference number: 2 (lower is better)
Translates to: TGSEPGGPLPSLSLCGSRGAPLA*LVGVSR
Trigger: TCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCC...CCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGAGCCAGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR GCA 90 bp TCAGAACCAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCCCTTGGGTTGTCAACTaGTACCTGGTAGCCCCACCC +
Preference number: 2 (lower is better)
Translates to: SEPGGPLPSLSLCGSRNCPWVVN*YLVAPP
Trigger: GGGTGGGGCTACCAGGTAGCAGTTGACAACCCAAGG...GCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR CCA 90 bp ACTGGCTCAGAACCAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGTCTACCCCTAGACCTTaGCCTCCAGGGAAAAAGTGT +
Preference number: 2 (lower is better)
Translates to: TGSEPGGPLPSLSLCGSRSTPRP*PPGKKC
Trigger: ACACTTTTTCCCTGGAGGCCAAGGTCTAGGGGTAGA...CCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGAGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR TCA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTCTTGCCTTGTTGGTGTaGGCCGAGCACGCGTGCTTG +
Preference number: 2 (lower is better)
Translates to: SLTLAGVSMNREDCACLPLALLV*AEHACL
Trigger: CAAGCACGCGTGCTCGGCTCACACCAACAAGGCAAG...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR TCA 90 bp GGGCTTGCAGGTGGCCCCAGAAATCTGAGGAGACCAATGACTAAGACCAGATGTTGCCAGCAGTGGGTTTaGATGAGGATCTGGGTGACC +
Preference number: 2 (lower is better)
Translates to: GLAGGPRNLRRPMTKTRCCQQWV*MRIWVT
Trigger: GGTCACCCAGATCCTCATTCAAACCCACTGCTGGCA...ACATCTGGTCTTAGTCATTGGTCTCCTCAGATTTCTGGGGCCACCTGCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR GCA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTGGGGCGCCTTTGGCTTaGCTTGTTGGTGTGAGCCGA +
Preference number: 2 (lower is better)
Translates to: SLTLAGVSMNREDCACLPGAPLA*LVGVSR
Trigger: TCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCC...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CCA 90 bp AGGCAGCTGTTAATTGGCTCACTCTCTCAAGGCAAGCACTGTCTCAAGGCAGTCGAGAGGCTCCTTCCGTaGCTGGTAGCACAGGGCAAA +
Preference number: 2 (lower is better)
Translates to: RQLLIGSLSQGKHCLKAVERLLP*LVAQGK
Trigger: TTTGCCCTGTGCTACCAGCCACGGAAGGAGCCTCTC...GACTGCCTTGAGACAGTGCTTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR CCA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTGAGAGGCTCCTTCCGTaGCTGGTAGCACAGGGCAAA +
Preference number: 2 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTERLLP*LVAQGK
Trigger: TTTGCCCTGTGCTACCAGCCACGGAAGGAGCCTCTC...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CCA 90 bp CAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCCAGGCAGCTGTTAATTaGCTCACTCTCTCAAGGCAA +
Preference number: 2 (lower is better)
Translates to: QGVPCQVCLYVAPGIAEVQAAVN*LTLSRQ
Trigger: TTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCTG...GACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR TCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAATGGCAGGTGTTTCTATaGACAGAGAGGACTGTGCCT +
Preference number: 2 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKWQVFL*TERTVP
Trigger: AGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCA...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR GCA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTCCTTGGGTTGTCAACTaGTACCTGGTAGCCCCACCC +
Preference number: 2 (lower is better)
Translates to: SLTLAGVSMNREDCACLPPWVVN*YLVAPP
Trigger: GGGTGGGGCTACCAGGTAGCAGTTGACAACCCAAGG...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAAGGTCAGTGGTCATCTTaGCAGGTATCACTGTGGACA +
Preference number: 2 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKGQWSS*QVSLWT
Trigger: TGTCCACAGTGATACCTGCCAAGATGACCACTGACC...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR TCA 90 bp AGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATCTTACTTGCCTTGTTGGTGTaGGCCGAGCACGCGTGCTTG +
Preference number: 2 (lower is better)
Translates to: RFCKSENCNHMLGLRAILLALLV*AEHACL
Trigger: CAAGCACGCGTGCTCGGCTCACACCAACAAGGCAAG...TAAGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR TCA 90 bp TCAGAACCAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTTCTGGTATTGCTTTTaGCCTTCTCAAAACCCACCC +
Preference number: 2 (lower is better)
Translates to: SEPGGPLPSLSLCGSRNCFWYCF*PSQNPP
Trigger: GGGTGGGTTTTGAGAAGGTCAAAAGCAATACCAGAA...GCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR CCA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTTTTGGCTTGCCTTGTTaGTGTGAGCCGAGCACGCGT +
Preference number: 2 (lower is better)
Translates to: SLTLAGVSMNREDCACLPFGLPC*CEPSTR
Trigger: ACGCGTGCTCGGCTCACACCAACAAGGCAAGCCAAA...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCCCAGATGTGGGTCAGTaGTCATCTTGGCAGGTATCA +
Preference number: 2 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGPDVGQ*SSWQVS
Trigger: TGATACCTGCCAAGATGACCACTGACCCACATCTGG...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAAAGACCTTGGACATGGTaGTCTTTGAGAATGGGTCTG +
Preference number: 2 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKRPWTW*SLRMGL
Trigger: CAGACCCATTCTCAAAGACCACCATGTCCAAGGTCT...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CCA 90 bp AAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTTCACAAAGGACTTACAGAATGGGGCTTGCAGGTaGCCCCAGAAATCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: KWVFLSPCVTHIFTKDLQNGACR*PQKSEE
Trigger: CTCCTCAGATTTCTGGGGCCACCTGCAAGCCCCATT...CTGTAAGTCCTTTGTGAAGATGTGGGTGACACAGGGGGACAGGAAAACCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCGAAGCAGTGGAGACATaGATCTGGGTTGAGAAATGG +
Preference number: 2 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGEAVET*IWVEKW
Trigger: CCATTTCTCAACCCAGATCCATGTCTCCACTGCTTC...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR GCA 90 bp CAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCTCACTTCTCAGAGGGAGAACTGTAACCACATaGTGGGCCTTAGAGCAATCT +
Preference number: 2 (lower is better)
Translates to: QVCLYVAPGIAEVSLLRGRTVTT*WALEQS
Trigger: AGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCT...CCCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR GCA 90 bp AACATAGATACCAAATCCAGGAGAACACAGACCAGCGATAAGAGGGACGCTTCCGAATGGAATGGGGCTTaGAGGTGGCCCCAGAAATCT +
Preference number: 2 (lower is better)
Translates to: NIDTKSRRTQTSDKRDASEWNGA*RWPQKS
Trigger: AGATTTCTGGGGCCACCTGCAAGCCCCATTCCATTC...GGAAGCGTCCCTCTTATCGCTGGTCTGTGTTCTCCTGGATTTGGTATCTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR GCA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTAGAACTGTAACCACATaGTGGGCCTTAGAGCAATCT +
Preference number: 2 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTRTVTT*WALEQS
Trigger: AGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCT...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CCA 90 bp TTGTTTATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAATCTGTAGGAATGGAATaGGGCTTGCAGGTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: LFISLGCCCVSWKKRSPESVGME*GLQVAP
Trigger: TGGGGCCACCTGCAAGCCCCATTCCATTCCTACAGA...TTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAATAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR TCA 90 bp GGGCTTGCAGGTGGCCCCAGAAATCTGAGGAGACCAATGACTAAGACCAGATGTTGTTCTTGCTACACGTaGTTTTTACCTTTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: GLAGGPRNLRRPMTKTRCCSCYT*FLPFCL
Trigger: AAGACAGAAAGGTAAAAATCACGTGTAGCAAGAACA...ACATCTGGTCTTAGTCATTGGTCTCCTCAGATTTCTGGGGCCACCTGCAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR TCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCTCATACCTGAGTTTGTaGAATAAGAGTTGTTCTTGC +
Preference number: 2 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGSYLSL*NKSCSC
Trigger: GCAAGAACAACTCTTATTTCACAAACTCAGGTATGA...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR TCA 90 bp AAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTTCACAAAGGACTTACAGCTAAAAGCAGTTCCATaGAGGACAGGCGTTTCGTTT +
Preference number: 2 (lower is better)
Translates to: KWVFLSPCVTHIFTKDLQLKAVP*RTGVSF
Trigger: AAACGAAACGCCTGTCCTTCATGGAACTGCTTTTAG...CTGTAAGTCCTTTGTGAAGATGTGGGTGACACAGGGGGACAGGAAAACCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR GCA 90 bp AGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGGTGTTTCTATGAAACACCTGGCAGGTTCTaGAAGTCAGAGAACTGTAAC +
Preference number: 2 (lower is better)
Translates to: SWDRHLTGILDTGRCFYETPGRF*KSENCN
Trigger: GTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGT...TTCATAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CCA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATTTTGGCTTGCCTTGTTaGTGTGAGCCGAGCACGCGT +
Preference number: 2 (lower is better)
Translates to: FSIDLVMRQISTRITCSHFGLPC*CEPSTR
Trigger: ACGCGTGCTCGGCTCACACCAACAAGGCAAGCCAAA...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CCA 90 bp GGACTGAGAAATGACCAACATCAAGTATATACGGTACACTTAGCACTTGTTTCTAATTCAGCGGGTGCCTaGGAGGCTTCATTCACATTC +
Preference number: 2 (lower is better)
Translates to: GLRNDQHQVYTVHLALVSNSAGA*EASFTF
Trigger: GAATGTGAATGAAGCCTCCCAGGCACCCGCTGAATT...AGAAACAAGTGCTAAGTGTACCGTATATACTTGATGTTGGTCATTTCTCAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR TCA 90 bp GGACTGAGAAATGACCAACATCAAGTATATACGGTACACTTAGCACTTGTTTCTGACATGGATCTGGGTTaGGAAATGGGTTTTCCTGTC +
Preference number: 2 (lower is better)
Translates to: GLRNDQHQVYTVHLALVSDMDLG*EMGFPV
Trigger: GACAGGAAAACCCATTTCTCAACCCAGATCCATGTC...AGAAACAAGTGCTAAGTGTACCGTATATACTTGATGTTGGTCATTTCTCAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR CCA 90 bp TTGTTTATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAAAGGAGAACTGAAAAATaGGATTGGAGCTTTTGCCTT +
Preference number: 2 (lower is better)
Translates to: LFISLGCCCVSWKKRSPERRTEK*DWSFCL
Trigger: AAGGCAAAAGCTCCAATCCCATTTTTCAGTTCTCCT...TTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAATAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR TCA 72 bp GACGCTCACGGGCCTCGGAACTCTGGCCAGGCTCCCTaGGGGGTGCATCCTAGGAGAACTGAAAAATGGGAT +
Preference number: 3 (lower is better)
Translates to: DAHGPRNSGQAP*GVHPRRTEKWD
Trigger: ATCCCATTTTTCAGTTCTCCTAGGATGCACCCCTCAGGGAGCCTGGCCAGAGTTCCGAGGCCCGTGAGCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR CAA 90 bp CAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCGGGTCAGTGGTCATCTaGGCAGGTATCACTGTGGAC +
Preference number: 3 (lower is better)
Translates to: QGVPCQVCLYVAPGIAEVGSVVI*AGITVD
Trigger: GTCCACAGTGATACCTGCCAAGATGACCACTGACCC...GACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR CAA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCAGGGGCGCCTTTGGCTaGCCTTGTTGGTGTGAGCCG +
Preference number: 3 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHIRGAFG*PCWCEP
Trigger: CGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCT...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CAA 90 bp GTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGTGGGGAGGGGCGCCTTaGGCTTGCCTTGTTGGTGTG +
Preference number: 3 (lower is better)
Translates to: VAIHLAGSASQRTVTTCWWGGAP*ACLVGV
Trigger: CACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCA...CCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR GCA 72 bp AGATGGCAGCTACTGGCTCAGAACCAGGGGGTCCCTTaGCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCT +
Preference number: 3 (lower is better)
Translates to: RWQLLAQNQGVP*QVCLYVAPGIA
Trigger: AGCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGAGCCAGTAGCTGCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR TCA 72 bp AGTGGGGAGCTGTCAGACCTTGGACATGGTGGTCTTTaGGAATGGGTCTGCCCTTCTCTCCCTGACCAGTTG +
Preference number: 3 (lower is better)
Translates to: SGELSDLGHGGL*EWVCPSLPDQL
Trigger: CAACTGGTCAGGGAGAGAAGGGCAGACCCATTCTCAAAGACCACCATGTCCAAGGTCTGACAGCTCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR CCA 72 bp GAGAGGCTAAAAGAGGAATTTCCAGATGGCAGCTACTaGCTCAGAACCAGGGGGTCCCTTGCCAAGTCTGTC +
Preference number: 3 (lower is better)
Translates to: ERLKEEFPDGSY*LRTRGSLAKSV
Trigger: GACAGACTTGGCAAGGGACCCCCTGGTTCTGAGCCAGTAGCTGCCATCTGGAAATTCCTCTTTTAGCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR CAA 90 bp ATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACTGGGGAGGGGCGCCTTaGGCTTGCCTTGTTGGTGTG +
Preference number: 3 (lower is better)
Translates to: ITCSHTPGRFCKSENCNHWGGAP*ACLVGV
Trigger: CACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCA...GTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CAA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTGCCACTCCTCTGACCTaGGGTTGTCAACTGCTACCT +
Preference number: 3 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTATPLT*GCQLLP
Trigger: AGGTAGCAGTTGACAACCCAAGGTCAGAGGAGTGGC...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR-3UTR CAA 90 bp TCAGAACCAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCATGGGATTGGAGCTTTaGCCTTATCCTTACACCCCA +
Preference number: 3 (lower is better)
Translates to: SEPGGPLPSLSLCGSRNCMGLEL*PYPYTP
Trigger: TGGGGTGTAAGGATAAGGCAAAAGCTCCAATCCCAT...GCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR TCA 72 bp CCCGGAATTGCTGAGGTCTCACTTCTCAGAGGGCTTTaGTGGAAAATAAAGCAACAGCTGACGCTCACGGGC +
Preference number: 3 (lower is better)
Translates to: PGIAEVSLLRGL*WKIKQQLTLTG
Trigger: GCCCGTGAGCGTCAGCTGTTGCTTTATTTTCCATCAAAGCCCTCTGAGAAGTGAGACCTCAGCAATTCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR CAA 90 bp AAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTTCACAAAGGACTTACAGGTGCCAGCAGTGGGTTaGAATGAGGATCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: KWVFLSPCVTHIFTKDLQVPAVG*NEDLGD
Trigger: GTCACCCAGATCCTCATTCAAACCCACTGCTGGCAC...CTGTAAGTCCTTTGTGAAGATGTGGGTGACACAGGGGGACAGGAAAACCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR TCA 72 bp GGCAAAGTAAGGAAAGGGATGTGCCAGCAGTGGGTTTaGATGAGGATCTGGGTGACCAGCGGTGAATGTATG +
Preference number: 3 (lower is better)
Translates to: GKVRKGMCQQWV*MRIWVTSGECM
Trigger: CATACATTCACCGCTGGTCACCCAGATCCTCATTCAAACCCACTGCTGGCACATCCCTTTCCTTACTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR CCA 72 bp AGCTTTAAGCAAGGCCTCAGAAATTCAGCGGGTGCCTaGGAGGCTTCATTCACATTCACCTCTAAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: SFKQGLRNSAGA*EASFTFTSKER
Trigger: CCTCTCCTTAGAGGTGAATGTGAATGAAGCCTCCCAGGCACCCGCTGAATTTCTGAGGCCTTGCTTAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR TCA 72 bp TGTCACCCACATCTTCACAAAGGACTTACAGGTGGCTaGGAGATCTGTAGGAATGGAATGGGGCTTGCAGGT +
Preference number: 3 (lower is better)
Translates to: CHPHLHKGLTGG*EICRNGMGLAG
Trigger: ACCTGCAAGCCCCATTCCATTCCTACAGATCTCTCAGCCACCTGTAAGTCCTTTGTGAAGATGTGGGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR TCA 72 bp TTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTaGGGTCTCACTTCTCAGAGGGCTTTGATGGAAAAT +
Preference number: 3 (lower is better)
Translates to: LPSLSLCGSRNC*GLTSQRALMEN
Trigger: ATTTTCCATCAAAGCCCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR CAA 90 bp ATTCAGGCAGCTGTTAATTGGCTCACTCTCTCAAGGCAAGCACTGTCTCAAGGCAGCGGTGAATGTATGTaGTCTGTTAGTCCAGAATCT +
Preference number: 3 (lower is better)
Translates to: IQAAVNWLTLSRQALSQGSGECM*SVSPES
Trigger: AGATTCTGGACTAACAGACAACATACATTCACCGCT...GCCTTGAGACAGTGCTTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCTGAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
3UTR-3UTR CAA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTAGCGGTGAATGTATGTaGTCTGTTAGTCCAGAATCT +
Preference number: 3 (lower is better)
Translates to: SLTLAGVSMNREDCACLPSGECM*SVSPES
Trigger: AGATTCTGGACTAACAGACAACATACATTCACCGCT...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR CCA 72 bp CACTTGTTTATTTCTTTGGGATGTTGCTGTGTGTCATaGAAGAAACGCTCCCCTGAAAACTGTAACCAAACA +
Preference number: 3 (lower is better)
Translates to: HLFISLGCCCVS*KKRSPENCNQT
Trigger: TGTTTGGTTACAGTTTTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAATAAACAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp TCCAGAATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGCGAGCAGGCGAAGCTaGCTCGGGACCTCCCACGGA +
Preference number: 4 (lower is better)
Translates to: SRIYMLGTLGIPLGRGAFASRRS*LGTSHG
Trigger: TCCGTGGGAGGTCCCGAGGCAGCTTCGCCTGCTCGC...AAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGATTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGTCGACCAGGGGCATCTaGGCCACGTTCTGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: IYMLGTLGIPLGRGAFGLSTRGI*ATFWCA
Trigger: GGCGCACCAGAACGTGGCCCAGATGCCCCTGGTCGA...CAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCTGCCAGCAGTGGGTTTaGATGAGGATCTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSCQQWV*MRIWVT
Trigger: GGTCACCCAGATCCTCATTCAAACCCACTGCTGGCA...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCGGTCCTTGGAGCGGGTaGACAAGAAAATGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSGPWSG*TRKCSR
Trigger: GCGGCTACATTTTCTTGTCCACCCGCTCCAAGGACC...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR CAA 72 bp ACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTaGCCTTGTTGGTGTGAGCCGAGCACGCGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: TLGIPLGRGAFG*PCWCEPSTRAC
Trigger: ACAAGCACGCGTGCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCCTGGTAGGAGCTGTCTaGCATGGTTTTGCCCTTCGA +
Preference number: 4 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSLVGAV*HGFALR
Trigger: TCGAAGGGCAAAACCATGGCAGACAGCTCCTACCAG...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCAACCAGGGGGTCCCTTaGCAAGTCTGTCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSNQGVP*QVCLYV
Trigger: CACATAGAGACAGACTTGGCAAGGGACCCCCTGGTT...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCTCTCCATGTTGTCACTaGAATCCCGGTGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSSPCCH*NPGGCI
Trigger: GATGCAGCCACCGGGATTCCAGTGACAACATGGAGA...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp ACTGGCTCAGAACCAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGGCCAAACTCAGGCAGTaGCTGCCACGCCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: TGSEPGGPLPSLSLCGSRAKLRQ*LPRLDE
Trigger: TTCATCCAGGCGTGGCAGTCACTGCCTGAGTTTGGC...CCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGAGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCGCGAGCAGGCGAAGCTaGCTCGGGACCTCCCACGGA +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGASRRS*LGTSHG
Trigger: TCCGTGGGAGGTCCCGAGGCAGCTTCGCCTGCTCGC...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCCAGCATTGTGGCAAATaGTGGTGTCTCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSQHCGK*WCLLSR
Trigger: CCTGGAAAGGAGACACCAGCATTTGCCACAATGCTG...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp TCCAGAATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTTCGCAGTCGCGCACGTaGAGAGCTGCGTCCCTACAA +
Preference number: 4 (lower is better)
Translates to: SRIYMLGTLGIPLGRGAFSQSRT*RAASLQ
Trigger: TTGTAGGGACGCAGCTCTCCACGTGCGCGACTGCGA...AAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGATTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp ATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCACAGCTGAGAAGCTaGCTCGCAACCTCACCATCT +
Preference number: 4 (lower is better)
Translates to: IYMLGTLGIPLGRGAFGLPQLRS*LATSPS
Trigger: AGATGGTGAGGTTGCGAGTCAGCTTCTCAGCTGTGG...CAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp TCCAGAATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGAGAGGCTCCTTCCGTaGCTGGTAGCACAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SRIYMLGTLGIPLGRGAFERLLP*LVAQGK
Trigger: TTTGCCCTGTGCTACCAGCCACGGAAGGAGCCTCTC...AAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGATTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCTGTTGCTGTGTGTCATaGAAGAAACGCTCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSCCCVS*KKRSPE
Trigger: TTCAGGGGAGCGTTTCTTCCATGACACACAGCAACA...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAAACTGCCACGCCTGGATaGACCGCAGCTTGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKTATPG*TAAWLR
Trigger: TCGAAGCCAAGCTGCGGTTCATCCAGGCGTGGCAGT...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGCCCAGTGGCGGCGGCTaGTCAGCTAAGGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: ISTRITCSHTPGRFCKSEPSGGG*SAKAAA
Trigger: TGCCGCAGCCTTAGCTGAGCAGCCGCCGCCACTGGG...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTCCCAGTGGCGGCGGCTaGTCAGCTAAGGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: SLTLAGVSMNREDCACLPPSGGG*SAKAAA
Trigger: TGCCGCAGCCTTAGCTGAGCAGCCGCCGCCACTGGG...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGAGGAGCTGTCTGCCATaGTTTTGCCCTTCGATGCCA +
Preference number: 4 (lower is better)
Translates to: IYMLGTLGIPLGRGAFGLRSCLP*FCPSMP
Trigger: TGGCATCGAAGGGCAAAACCATGGCAGACAGCTCCT...CAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR CAA 72 bp TGTGGACAGATGACACTGAGGGCCACTCCTCTGACCTaGGGTTGTCAACTGCTACCTGGTAGCCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: CGQMTLRATPLT*GCQLLPGSPTP
Trigger: AGGGGTGGGGCTACCAGGTAGCAGTTGACAACCCAAGGTCAGAGGAGTGGCCCTCAGTGTCATCTGTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR CAA 72 bp CAGATGGCAGCTACTGGCTCAGAACCAGGGGGTCCCTaGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGC +
Preference number: 4 (lower is better)
Translates to: QMAATGSEPGGP*PSLSLCGSRNC
Trigger: GCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGAGCCAGTAGCTGCCATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCCCAAAGAGCAAAGTCTaGCCAGTCTTGGGATATATT +
Preference number: 4 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSPKSKV*PVLGYI
Trigger: AATATATCCCAAGACTGGTCAGACTTTGCTCTTTGG...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp ATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGTGGCAGGTGTTTCTATaGACAGAGAGGACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: IYMLGTLGIPLGRGAFGLWQVFL*TERTVP
Trigger: AGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCA...CAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp ATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTGACTGGAATCCTTaGCACTGGCAGGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: IYMLGTLGIPLGRGAFGLPDWNP*HWQVFL
Trigger: TAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGG...CAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp ATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGGTTGGGATAGACACCTaGCTGGAATCCTTGACACTG +
Preference number: 4 (lower is better)
Translates to: IYMLGTLGIPLGRGAFGLVGIDT*LESLTL
Trigger: CAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAAC...CAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp CAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCTCACTTCTCAGAGGGGGGGCGCCTTTGGCTTaGCTTGTTGGTGTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: QVCLYVAPGIAEVSLLRGGAPLA*LVGVSR
Trigger: TCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCC...CCCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp ACTGGCTCAGAACCAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGTTGTCCAGGGTCCAGTaGGTTTTCAGAAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: TGSEPGGPLPSLSLCGSRLSRVQ*VFRSQQ
Trigger: TTGCTGGCTTCTGAAAACCCACTGGACCCTGGACAA...CCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGAGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp ATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCAGATGTGGGTCAGTaGTCATCTTGGCAGGTATCA +
Preference number: 4 (lower is better)
Translates to: IYMLGTLGIPLGRGAFGLPDVGQ*SSWQVS
Trigger: TGATACCTGCCAAGATGACCACTGACCCACATCTGG...CAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp TCAGAACCAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCAATGGGGCTTGCAGGTaGCCCCAGAAATCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SEPGGPLPSLSLCGSRNCNGACR*PQKSEE
Trigger: CTCCTCAGATTTCTGGGGCCACCTGCAAGCCCCATT...GCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp ATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGGGAGCTGTCAGACCTTaGACATGGTGGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: IYMLGTLGIPLGRGAFGLGAVRP*TWWSLR
Trigger: TCTCAAAGACCACCATGTCCAAGGTCTGACAGCTCC...CAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAACGGGCCTCGGAACTCTaGCCAGGCTCCCTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKRASEL*PGSLRG
Trigger: ACCCCTCAGGGAGCCTGGCCAGAGTTCCGAGGCCCG...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAATGCCAGCAGTGGGTTTaGATGAGGATCTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKCQQWV*MRIWVT
Trigger: GGTCACCCAGATCCTCATTCAAACCCACTGCTGGCA...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp TCCAGAATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTTGGCAGGTGTTTCTATaGACAGAGAGGACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SRIYMLGTLGIPLGRGAFWQVFL*TERTVP
Trigger: AGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCA...AAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGATTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp TCCAGAATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGTTGGGATAGACACCTaGCTGGAATCCTTGACACTG +
Preference number: 4 (lower is better)
Translates to: SRIYMLGTLGIPLGRGAFVGIDT*LESLTL
Trigger: CAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAAC...AAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGATTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAACTCAGGCAGTGACTaGCACGCCTGGATGAACCGC +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGNSGSD*HAWMNR
Trigger: GCGGTTCATCCAGGCGTGGCAGTCACTGCCTGAGTT...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTGGGGCGCCTTTGGCTTaGCTTGTTGGTGTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTGAPLA*LVGVSR
Trigger: TCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCC...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTTCGCAGTCGCGCACGTaGAGAGCTGCGTCCCTACAA +
Preference number: 4 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTSQSRT*RAASLQ
Trigger: TTGTAGGGACGCAGCTCTCCACGTGCGCGACTGCGA...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGTGGATGACAGCATTGTaGCAAATGCTGGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: IYMLGTLGIPLGRGAFGLWMTAL*QMLVSP
Trigger: AGGAGACACCAGCATTTGCCACAATGCTGTCATCCA...CAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp TCCAGAATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTAGCTTTGCATCTGCCTaGACCCCATATTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SRIYMLGTLGIPLGRGAFSFASA*TPYLSR
Trigger: CCTGGACAAATATGGGGTCCAGGCAGATGCAAAGCT...AAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGATTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp TCCAGAATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTAGAGAATGGCCCACCTaGCTTGCTCATAGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: SRIYMLGTLGIPLGRGAFREWPT*LAHRVG
Trigger: ACCAACTCTATGAGCAAGCCAGGTGGGCCATTCTCT...AAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGATTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp GGGCTTGCAGGTGGCCCCAGAAATCTGAGGAGACCAATGACTAAGACCAGATGTAGTGACTGCCACGCCTaGATGAACCGCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GLAGGPRNLRRPMTKTRCSDCHA*MNRSLA
Trigger: AGCCAAGCTGCGGTTCATCCAGGCGTGGCAGTCACT...ACATCTGGTCTTAGTCATTGGTCTCCTCAGATTTCTGGGGCCACCTGCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp TCCAGAATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTTCTACCCCTAGACCTTaGCCTCCAGGGAAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: SRIYMLGTLGIPLGRGAFSTPRP*PPGKKC
Trigger: ACACTTTTTCCCTGGAGGCCAAGGTCTAGGGGTAGA...AAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGATTCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCAATCAACCTGTTATATaGAACTCCCAGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSNQPVI*NSQNVI
Trigger: GATGACATTCTGGGAGTTTCATATAACAGGTTGATT...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp CAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCTCACTTCTCAGAGGGTTTGGTCAAACTCGATaGCCACCTGCCGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: QVCLYVAPGIAEVSLLRGFGQTR*PPAGFP
Trigger: GGGAAACCCGGCAGGTGGTCATCGAGTTTGACCAAA...CCCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp CAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCGTGACGTCTTTCTGCTaGTCTTCATTGGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: QGVPCQVCLYVAPGIAEVVTSFC*SSLGWS
Trigger: TGACCATCCCAATGAAGAGCAGCAGAAAGACGTCAC...GACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp TCCAGAATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGTGACGTCTTTCTGCTaGTCTTCATTGGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: SRIYMLGTLGIPLGRGAFVTSFC*SSLGWS
Trigger: TGACCATCCCAATGAAGAGCAGCAGAAAGACGTCAC...AAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGATTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp TCCAGAATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGAGAAGCTTTGCATCTaGCTGGACCCCATATTTGTC +
Preference number: 4 (lower is better)
Translates to: SRIYMLGTLGIPLGRGAFEKLCI*LDPIFV
Trigger: GACAAATATGGGGTCCAGGCAGATGCAAAGCTTCTC...AAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGATTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCCCTTCGATGCCAACATaGAGGCAGCCATCCATTGGG +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGPSMPT*RQPSIG
Trigger: CCCAATGGATGGCTGCCTGCATGTTGGCATCGAAGG...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTAACTCAGGCAGTGACTaGCACGCCTGGATGAACCGC +
Preference number: 4 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTNSGSD*HAWMNR
Trigger: GCGGTTCATCCAGGCGTGGCAGTCACTGCCTGAGTT...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp ACTGGCTCAGAACCAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAGAACTGTAACCACATaGTGGGCCTTAGAGCAATCT +
Preference number: 4 (lower is better)
Translates to: TGSEPGGPLPSLSLCGSRRTVTT*WALEQS
Trigger: AGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCT...CCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGAGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAATCTGCTGCTCTTCATTaGGATGGTCAACGCGGACCA +
Preference number: 4 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKSAALH*DGQRGP
Trigger: TGGTCCGCGTTGACCATCCCAATGAAGAGCAGCAGA...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp CAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCTGTAAAGTCAGTGGATaGCAGCATTGTGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: QGVPCQVCLYVAPGIAEVCKVSG*QHCGKC
Trigger: GCATTTGCCACAATGCTGTCATCCACTGACTTTACA...GACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCCCACAGCTGAGAAGCTaGCTCGCAACCTCACCATCT +
Preference number: 4 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHIPQLRS*LATSPS
Trigger: AGATGGTGAGGTTGCGAGTCAGCTTCTCAGCTGTGG...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp AACATAGATACCAAATCCAGGAGAACACAGACCAGCGATAAGAGGGACGCTTCCACTGCCACGCCTGGATaGACCGCAGCTTGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: NIDTKSRRTQTSDKRDASTATPG*TAAWLR
Trigger: TCGAAGCCAAGCTGCGGTTCATCCAGGCGTGGCAGT...GGAAGCGTCCCTCTTATCGCTGGTCTGTGTTCTCCTGGATTTGGTATCTATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp TCCAGAATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTCTAAAAGCAGTTCCATaGAGGACAGGCGTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: SRIYMLGTLGIPLGRGAFLKAVP*RTGVSF
Trigger: AAACGAAACGCCTGTCCTTCATGGAACTGCTTTTAG...AAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGATTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp AGCACAGGGCAAAGTAAGGAAAGGGATGTGCCAGCAGTGGGTTTGAATGAGGATCTGCCCTTCTCTCCCTaGCCAGTTGGGATAGACACC +
Preference number: 4 (lower is better)
Translates to: STGQSKERDVPAVGLNEDLPFSP*PVGIDT
Trigger: GGTGTCTATCCCAACTGGTCAGGGAGAGAAGGGCAG...ATCCTCATTCAAACCCACTGCTGGCACATCCCTTTCCTTACTTTGCCCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAAGCGCACGTGGAGAGCTaGGTCCCTACAAACTACCCC +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKAHVES*VPTNYP
Trigger: GGGGTAGTTTGTAGGGACGCAGCTCTCCACGTGCGC...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAACAGCATTGTGGCAAATaGTGGTGTCTCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKQHCGK*WCLLSR
Trigger: CCTGGAAAGGAGACACCAGCATTTGCCACAATGCTG...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp TCAGAACCAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATTGCCACAATCTTGCAATCTaGACTCAGGCAGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SEPGGPLPSLSLCGSRNCHNLAI*TQAGES
Trigger: GCTTTCACCTGCCTGAGTGCAGATTGCAAGATTGTG...GCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp TCCAGAATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTAGAACTGTAACCACATaGTGGGCCTTAGAGCAATCT +
Preference number: 4 (lower is better)
Translates to: SRIYMLGTLGIPLGRGAFRTVTT*WALEQS
Trigger: AGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCT...AAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGATTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGCCTTGGGTTGTCAACTaGTACCTGGTAGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: ISTRITCSHTPGRFCKSEPWVVN*YLVAPP
Trigger: GGGTGGGGCTACCAGGTAGCAGTTGACAACCCAAGG...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCCAGAAATTCAGCGGGTaGCTGGGAGGCTTCATTCAC +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGQKFSG*LGGFIH
Trigger: GTGAATGAAGCCTCCCAGGCACCCGCTGAATTTCTG...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp ACTGGCTCAGAACCAGGGGGTCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGGACAGTTTGCTAATGTaGTACTGTAGAGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: TGSEPGGPLPSLSLCGSRDSLLM*YCRAAK
Trigger: CTTTGCAGCTCTACAGTACCACATTAGCAAACTGTC...CCGGGAGCCACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTCTGAGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTGATGTTGAGGACCTCTaGCTGGTAGGAGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTDVEDL*LVGAVC
Trigger: GCAGACAGCTCCTACCAGCCAGAGGTCCTCAACATC...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCGGTCCTTGGAGCGGGTaGACAAGAAAATGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHIGPWSG*TRKCSR
Trigger: GCGGCTACATTTTCTTGTCCACCCGCTCCAAGGACC...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAATCTACCCCTAGACCTTaGCCTCCAGGGAAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKSTPRP*PPGKKC
Trigger: ACACTTTTTCCCTGGAGGCCAAGGTCTAGGGGTAGA...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
3UTR CAA 72 bp TCCCTTGCCAAGTCTGTCTCTATGTGGCTCCCGGAATaGCTGAGGTCTCACTTCTCAGAGGGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: SLAKSVSMWLPE*LRSHFSEGFDG
Trigger: TCCATCAAAGCCCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTGGCAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCGAAATGAAAGGATGTTaGGGACCTCTGGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGEMKGC*GPLAGR
Trigger: CCTACCAGCCAGAGGTCCTCAACATCCTTTCATTTC...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAAGCCAAACTCAGGCAGTaGCTGCCACGCCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKAKLRQ*LPRLDE
Trigger: TTCATCCAGGCGTGGCAGTCACTGCCTGAGTTTGGC...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp AGCACAGGGCAAAGTAAGGAAAGGGATGTGCCAGCAGTGGGTTTGAATGAGGATTTTGGTCAAACTCGATaGCCACCTGCCGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: STGQSKERDVPAVGLNEDFGQTR*PPAGFP
Trigger: GGGAAACCCGGCAGGTGGTCATCGAGTTTGACCAAA...ATCCTCATTCAAACCCACTGCTGGCACATCCCTTTCCTTACTTTGCCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp AGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGGTGTTTCTATGAACTTGCCTTGTTGGTGTaGGCCGAGCACGCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SWDRHLTGILDTGRCFYELALLV*AEHACL
Trigger: CAAGCACGCGTGCTCGGCTCACACCAACAAGGCAAG...TTCATAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCCCTGACTGGAATCCTTaGCACTGGCAGGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGPDWNP*HWQVFL
Trigger: TAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGG...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp GTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGGACATGGTGGTCTTTaGGAATGGGTCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VAIHLAGSASQRTVTTCWGHGGL*EWVCPS
Trigger: AGAAGGGCAGACCCATTCTCAAAGACCACCATGTCC...CCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAAGGCTCCCGGAATTGCTaGGGTCTCACTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKGSRNC*GLTSQR
Trigger: CCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCC...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCGGTGAAGAGAAGCTTTaGATCTGCCTGGACCCCATA +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGGEEKL*ICLDPI
Trigger: TATGGGGTCCAGGCAGATGCAAAGCTTCTCTTCACC...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp ATTCAGGCAGCTGTTAATTGGCTCACTCTCTCAAGGCAAGCACTGTCTCAAGGCCCTTCGATGCCAACATaGAGGCAGCCATCCATTGGG +
Preference number: 4 (lower is better)
Translates to: IQAAVNWLTLSRQALSQGPSMPT*RQPSIG
Trigger: CCCAATGGATGGCTGCCTGCATGTTGGCATCGAAGG...GCCTTGAGACAGTGCTTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp AGGCAGCTGTTAATTGGCTCACTCTCTCAAGGCAAGCACTGTCTCAAGGCAGTCGGTTTTGCCCTTCGATaGCAACATGCAGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RQLLIGSLSQGKHCLKAVGFALR*QHAGSH
Trigger: ATGGCTGCCTGCATGTTGGCATCGAAGGGCAAAACC...GACTGCCTTGAGACAGTGCTTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp GTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGAATGGAATGGGGCTTaGAGGTGGCCCCAGAAATCT +
Preference number: 4 (lower is better)
Translates to: VAIHLAGSASQRTVTTCWEWNGA*RWPQKS
Trigger: AGATTTCTGGGGCCACCTGCAAGCCCCATTCCATTC...CCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTGAATGGAATGGGGCTTaGAGGTGGCCCCAGAAATCT +
Preference number: 4 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTEWNGA*RWPQKS
Trigger: AGATTTCTGGGGCCACCTGCAAGCCCCATTCCATTC...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGAGAATGGCCCACCTaGCTTGCTCATAGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGREWPT*LAHRVG
Trigger: ACCAACTCTATGAGCAAGCCAGGTGGGCCATTCTCT...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTAATGGGGCTTGCAGGTaGCCCCAGAAATCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLTLAGVSMNREDCACLPNGACR*PQKSEE
Trigger: CTCCTCAGATTTCTGGGGCCACCTGCAAGCCCCATT...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAAGTCAGACCTTGGACATaGTGGTCTTTGAGAATGGGT +
Preference number: 4 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKVRPWT*WSLRMG
Trigger: ACCCATTCTCAAAGACCACCATGTCCAAGGTCTGAC...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp CAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCTCACTTCTCAGAGGGGGAGCTGTCAGACCTTaGACATGGTGGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: QVCLYVAPGIAEVSLLRGGAVRP*TWWSLR
Trigger: TCTCAAAGACCACCATGTCCAAGGTCTGACAGCTCC...CCCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTTGCTTGTTTCAATCCTaGCCGCCGGTCAATTTGTGG +
Preference number: 4 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTCLFQS*PPVNLW
Trigger: CCACAAATTGACCGGCGGTCAGGATTGAAACAAGCA...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAACTAAAAGCAGTTCCATaGAGGACAGGCGTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKLKAVP*RTGVSF
Trigger: AAACGAAACGCCTGTCCTTCATGGAACTGCTTTTAG...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTGGACATGGTGGTCTTTaGGAATGGGTCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLTLAGVSMNREDCACLPGHGGL*EWVCPS
Trigger: AGAAGGGCAGACCCATTCTCAAAGACCACCATGTCC...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGTGTGACGTCTTTCTaGTGCTCTTCATTGGGATGG +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGSVTSF*CSSLGW
Trigger: CCATCCCAATGAAGAGCAGCAGAAAGACGTCACACT...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAATCGTAAGAGCAGCTaGTCATCCTCTTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGNRKSS*SSSWMP
Trigger: AGGCATCCAAGAGGATGAGCAGCTGCTCTTACGATT...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTAACCTCGGACTCGCCTaGAAAATCCTGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTNLGLA*KILCFS
Trigger: GCTGAAACACAGGATTTTGCAGGCGAGTCCGAGGTT...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp AGCACAGGGCAAAGTAAGGAAAGGGATGTGCCAGCAGTGGGTTTGAATGAGGATCTGGTAGGAGCTGTCTaGCATGGTTTTGCCCTTCGA +
Preference number: 4 (lower is better)
Translates to: STGQSKERDVPAVGLNEDLVGAV*HGFALR
Trigger: TCGAAGGGCAAAACCATGGCAGACAGCTCCTACCAG...ATCCTCATTCAAACCCACTGCTGGCACATCCCTTTCCTTACTTTGCCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp GGGCTTGCAGGTGGCCCCAGAAATCTGAGGAGACCAATGACTAAGACCAGATGTCACAATCTTGCAATCTaGACTCAGGCAGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: GLAGGPRNLRRPMTKTRCHNLAI*TQAGES
Trigger: GCTTTCACCTGCCTGAGTGCAGATTGCAAGATTGTG...ACATCTGGTCTTAGTCATTGGTCTCCTCAGATTTCTGGGGCCACCTGCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCACTCGTGCACAATCTTaGAATCTGCACTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHITRAQS*NLHSGR
Trigger: CCTGCCTGAGTGCAGATTGCAAGATTGTGCACGAGT...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTACTCGTGCACAATCTTaGAATCTGCACTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTTRAQS*NLHSGR
Trigger: CCTGCCTGAGTGCAGATTGCAAGATTGTGCACGAGT...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAATGGGATTGGAGCTTTTaGCTTATCCTTACACCCCAA +
Preference number: 4 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKWDWSF*LILTPQ
Trigger: TTGGGGTGTAAGGATAAGGCAAAAGCTCCAATCCCA...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTTGTCCAGGGTCCAGTaGGTTTTCAGAAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHILSRVQ*VFRSQQ
Trigger: TTGCTGGCTTCTGAAAACCCACTGGACCCTGGACAA...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp AAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTTCACAAAGGACTTACAGGATGTTGAGGACCTCTaGCTGGTAGGAGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: KWVFLSPCVTHIFTKDLQDVEDL*LVGAVC
Trigger: GCAGACAGCTCCTACCAGCCAGAGGTCCTCAACATC...CTGTAAGTCCTTTGTGAAGATGTGGGTGACACAGGGGGACAGGAAAACCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp AAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTTCACAAAGGACTTACAGTTTGGCTTGCCTTGTTaGTGTGAGCCGAGCACGCGT +
Preference number: 4 (lower is better)
Translates to: KWVFLSPCVTHIFTKDLQFGLPC*CEPSTR
Trigger: ACGCGTGCTCGGCTCACACCAACAAGGCAAGCCAAA...CTGTAAGTCCTTTGTGAAGATGTGGGTGACACAGGGGGACAGGAAAACCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp AACATAGATACCAAATCCAGGAGAACACAGACCAGCGATAAGAGGGACGCTTCCTTTGGCTTGCCTTGTTaGTGTGAGCCGAGCACGCGT +
Preference number: 4 (lower is better)
Translates to: NIDTKSRRTQTSDKRDASFGLPC*CEPSTR
Trigger: ACGCGTGCTCGGCTCACACCAACAAGGCAAGCCAAA...GGAAGCGTCCCTCTTATCGCTGGTCTGTGTTCTCCTGGATTTGGTATCTATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCCCAGATGTGGGTCAGTaGTCATCTTGGCAGGTATCA +
Preference number: 4 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHIPDVGQ*SSWQVS
Trigger: TGATACCTGCCAAGATGACCACTGACCCACATCTGG...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAATCTGTAGGAATGGAATaGGGCTTGCAGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKSVGME*GLQVAP
Trigger: TGGGGCCACCTGCAAGCCCCATTCCATTCCTACAGA...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp GGGCTTGCAGGTGGCCCCAGAAATCTGAGGAGACCAATGACTAAGACCAGATGTGAAGCAGTGGAGACATaGATCTGGGTTGAGAAATGG +
Preference number: 4 (lower is better)
Translates to: GLAGGPRNLRRPMTKTRCEAVET*IWVEKW
Trigger: CCATTTCTCAACCCAGATCCATGTCTCCACTGCTTC...ACATCTGGTCTTAGTCATTGGTCTCCTCAGATTTCTGGGGCCACCTGCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGACCTTGGACATGGTaGTCTTTGAGAATGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGRPWTW*SLRMGL
Trigger: CAGACCCATTCTCAAAGACCACCATGTCCAAGGTCT...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAAAACTGTCCAGATGGCAGCTACTaGCTCAGAACCAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ISLGCCCVSWKKRSPENCPDGSY*LRTRGS
Trigger: GGACCCCCTGGTTCTGAGCCAGTAGCTGCCATCTGG...ACAGTTTTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp AGGCAGCTGTTAATTGGCTCACTCTCTCAAGGCAAGCACTGTCTCAAGGCAGTCCCAAGTCATGGTGGATaGTGCTGGTGTTCCATTGAT +
Preference number: 4 (lower is better)
Translates to: RQLLIGSLSQGKHCLKAVPSHGG*CWCSID
Trigger: ATCAATGGAACACCAGCATCATCCACCATGACTTGG...GACTGCCTTGAGACAGTGCTTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGGAAATGAAAGGATGTTaGGGACCTCTGGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ISTRITCSHTPGRFCKSEEMKGC*GPLAGR
Trigger: CCTACCAGCCAGAGGTCCTCAACATCCTTTCATTTC...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCTTTTGCACACCGTGGTaGCACAAAACATTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGFCTPW*HKTFWV
Trigger: AACCCAGAATGTTTTGTGTCACCACGGTGTGCAAAA...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp CAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCTCACTTCTCAGAGGGTTCTGGTATTGCTTTTaGCCTTCTCAAAACCCACCC +
Preference number: 4 (lower is better)
Translates to: QVCLYVAPGIAEVSLLRGFWYCF*PSQNPP
Trigger: GGGTGGGTTTTGAGAAGGTCAAAAGCAATACCAGAA...CCCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAAGTCTTGGGATATATTTaGGCATCACTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKVLGYI*ASLLQH
Trigger: ATGTTGGAGGAGTGATGCTCAAATATATCCCAAGAC...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536936.1
CDS-3UTR GCA 90 bp CAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCTCACTTCTCAGAGGGTTCAGAAGCCAGCAATaGTTCTGTTCCCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: QVCLYVAPGIAEVSLLRGFRSQQ*FCSHQR
Trigger: TCTTTGGTGGGAACAGAAGCATTGCTGGCTTCTGAA...CCCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp AGGCAGCTGTTAATTGGCTCACTCTCTCAAGGCAAGCACTGTCTCAAGGCAGTCGAGAAGCTTTGCATCTaGCTGGACCCCATATTTGTC +
Preference number: 4 (lower is better)
Translates to: RQLLIGSLSQGKHCLKAVEKLCI*LDPIFV
Trigger: GACAAATATGGGGTCCAGGCAGATGCAAAGCTTCTC...GACTGCCTTGAGACAGTGCTTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCAATCGTAAGAGCAGCTaGTCATCCTCTTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHINRKSS*SSSWMP
Trigger: AGGCATCCAAGAGGATGAGCAGCTGCTCTTACGATT...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp AGCACAGGGCAAAGTAAGGAAAGGGATGTGCCAGCAGTGGGTTTGAATGAGGATTGTCTGCCATGGTTTTaGCCTTCGATGCCAACATGC +
Preference number: 4 (lower is better)
Translates to: STGQSKERDVPAVGLNEDCLPWF*PSMPTC
Trigger: GCATGTTGGCATCGAAGGGCAAAACCATGGCAGACA...ATCCTCATTCAAACCCACTGCTGGCACATCCCTTTCCTTACTTTGCCCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCACACCTGGCAGGTTCTaGAAGTCAGAGAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHITPGRF*KSENCN
Trigger: GTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGT...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp AGCACAGGGCAAAGTAAGGAAAGGGATGTGCCAGCAGTGGGTTTGAATGAGGATCATTGTGGCAAATGCTaGTGTCTCCTTTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: STGQSKERDVPAVGLNEDHCGKC*CLLSRS
Trigger: GCTCCTGGAAAGGAGACACCAGCATTTGCCACAATG...ATCCTCATTCAAACCCACTGCTGGCACATCCCTTTCCTTACTTTGCCCTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTCATTGTGGCAAATGCTaGTGTCTCCTTTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SLTLAGVSMNREDCACLPHCGKC*CLLSRS
Trigger: GCTCCTGGAAAGGAGACACCAGCATTTGCCACAATG...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAATCTGCTGCTCTTCATTaGGATGGTCAACGCGGACCA +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKSAALH*DGQRGP
Trigger: TGGTCCGCGTTGACCATCCCAATGAAGAGCAGCAGA...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAGCTTTGCATCTGCCTaGACCCCATATTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ISTRITCSHTPGRFCKSESFASA*TPYLSR
Trigger: CCTGGACAAATATGGGGTCCAGGCAGATGCAAAGCT...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp GGGCTTGCAGGTGGCCCCAGAAATCTGAGGAGACCAATGACTAAGACCAGATGTTTTCTTCTAAGAGAATaGCCCACCTGGCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: GLAGGPRNLRRPMTKTRCFLLRE*PTWLAH
Trigger: ATGAGCAAGCCAGGTGGGCCATTCTCTTAGAAGAAA...ACATCTGGTCTTAGTCATTGGTCTCCTCAGATTTCTGGGGCCACCTGCAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGCCATGTTTTCGAGACTaGAAGCCACCTGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: ISTRITCSHTPGRFCKSEPCFRD*KPPEMQ
Trigger: CTGCATCTCAGGTGGCTTCCAGTCTCGAAAACATGG...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp GGACTGAGAAATGACCAACATCAAGTATATACGGTACACTTAGCACTTGTTTCTTCGACCAGGGGCATCTaGGCCACGTTCTGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: GLRNDQHQVYTVHLALVSSTRGI*ATFWCA
Trigger: GGCGCACCAGAACGTGGCCCAGATGCCCCTGGTCGA...AGAAACAAGTGCTAAGTGTACCGTATATACTTGATGTTGGTCATTTCTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp ATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAAAACTGTAGTGACTGCCACGCCTaGATGAACCGCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ISLGCCCVSWKKRSPENCSDCHA*MNRSLA
Trigger: AGCCAAGCTGCGGTTCATCCAGGCGTGGCAGTCACT...ACAGTTTTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAATCTCCATGTTGTCACTaGAATCCCGGTGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKSPCCH*NPGGCI
Trigger: GATGCAGCCACCGGGATTCCAGTGACAACATGGAGA...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAATCGAGTGTTTCATTCTaGTCCTTGGAGCGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKSSVSF*SLERVD
Trigger: GTCCACCCGCTCCAAGGACCAGAATGAAACACTCGA...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ATTCAGGCAGCTGTTAATTGGCTCACTCTCTCAAGGCAAGCACTGTCTCAAGGCCCGCCGGTCAATTTGTaGAACAAGTCCTCATCGAGT +
Preference number: 4 (lower is better)
Translates to: IQAAVNWLTLSRQALSQGPPVNL*NKSSSS
Trigger: ACTCGATGAGGACTTGTTCCACAAATTGACCGGCGG...GCCTTGAGACAGTGCTTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTCCGCCGGTCAATTTGTaGAACAAGTCCTCATCGAGT +
Preference number: 4 (lower is better)
Translates to: SLTLAGVSMNREDCACLPPPVNL*NKSSSS
Trigger: ACTCGATGAGGACTTGTTCCACAAATTGACCGGCGG...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAAAACTGTGAGAGGCTCCTTCCGTaGCTGGTAGCACAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: ISLGCCCVSWKKRSPENCERLLP*LVAQGK
Trigger: TTTGCCCTGTGCTACCAGCCACGGAAGGAGCCTCTC...ACAGTTTTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp AACATAGATACCAAATCCAGGAGAACACAGACCAGCGATAAGAGGGACGCTTCCTGGCAGGTATCACTGTaGACAGATGACACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: NIDTKSRRTQTSDKRDASWQVSL*TDDTEG
Trigger: GCCCTCAGTGTCATCTGTCCACAGTGATACCTGCCA...GGAAGCGTCCCTCTTATCGCTGGTCTGTGTTCTCCTGGATTTGGTATCTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp AGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATCTTATCTGTAGGAATGGAATaGGGCTTGCAGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RFCKSENCNHMLGLRAILSVGME*GLQVAP
Trigger: TGGGGCCACCTGCAAGCCCCATTCCATTCCTACAGA...TAAGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCGAAGCAGTGGAGACATaGATCTGGGTTGAGAAATGG +
Preference number: 4 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHIEAVET*IWVEKW
Trigger: CCATTTCTCAACCCAGATCCATGTCTCCACTGCTTC...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp AAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTTCACAAAGGACTTACAGCTCTCCCTGACCAGTTaGGATAGACACCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: KWVFLSPCVTHIFTKDLQLSLTS*DRHLTG
Trigger: TCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAG...CTGTAAGTCCTTTGTGAAGATGTGGGTGACACAGGGGGACAGGAAAACCCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp GTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGAGAGGAATTTCCAGATaGCAGCTACTGGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: VAIHLAGSASQRTVTTCWRGISR*QLLAQN
Trigger: GTTCTGAGCCAGTAGCTGCCATCTGGAAATTCCTCT...CCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp AGCACAGGGCAAAGTAAGGAAAGGGATGTGCCAGCAGTGGGTTTGAATGAGGATAATTCAGCGGGTGCCTaGGAGGCTTCATTCACATTC +
Preference number: 4 (lower is better)
Translates to: STGQSKERDVPAVGLNEDNSAGA*EASFTF
Trigger: GAATGTGAATGAAGCCTCCCAGGCACCCGCTGAATT...ATCCTCATTCAAACCCACTGCTGGCACATCCCTTTCCTTACTTTGCCCTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCCCAAAGAGCAAAGTCTaGCCAGTCTTGGGATATATT +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGPKSKV*PVLGYI
Trigger: AATATATCCCAAGACTGGTCAGACTTTGCTCTTTGG...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp GTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGTTTAAAAACCACAGCTaGGAAGCTGACTCGCAACCT +
Preference number: 4 (lower is better)
Translates to: VAIHLAGSASQRTVTTCWFKNHS*EADSQP
Trigger: AGGTTGCGAGTCAGCTTCTCAGCTGTGGTTTTTAAA...CCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTTTAAAAACCACAGCTaGGAAGCTGACTCGCAACCT +
Preference number: 4 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHIFKNHS*EADSQP
Trigger: AGGTTGCGAGTCAGCTTCTCAGCTGTGGTTTTTAAA...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp AACATAGATACCAAATCCAGGAGAACACAGACCAGCGATAAGAGGGACGCTTCCTGCTTGTTTCAATCCTaGCCGCCGGTCAATTTGTGG +
Preference number: 4 (lower is better)
Translates to: NIDTKSRRTQTSDKRDASCLFQS*PPVNLW
Trigger: CCACAAATTGACCGGCGGTCAGGATTGAAACAAGCA...GGAAGCGTCCCTCTTATCGCTGGTCTGTGTTCTCCTGGATTTGGTATCTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTTCAGAAGCCAGCAATaGTTCTGTTCCCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHIFRSQQ*FCSHQR
Trigger: TCTTTGGTGGGAACAGAAGCATTGCTGGCTTCTGAA...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp ATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACGGTTTTGCCCTTCGATaGCAACATGCAGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: ITCSHTPGRFCKSENCNHGFALR*QHAGSH
Trigger: ATGGCTGCCTGCATGTTGGCATCGAAGGGCAAAACC...GTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAAAACTCGATGACCACCTaGCGGGTTTCCCAGTTTACA +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKNSMTT*RVSQFT
Trigger: TGTAAACTGGGAAACCCGGCAGGTGGTCATCGAGTT...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp TTGTTTATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAACCTTGGGTTGTCAACTaGTACCTGGTAGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: LFISLGCCCVSWKKRSPEPWVVN*YLVAPP
Trigger: GGGTGGGGCTACCAGGTAGCAGTTGACAACCCAAGG...TTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAATAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp AGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGGTGTTTCTATGAAAGGCTCCCTGAGGGGTaGATCCTAGGAGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: SWDRHLTGILDTGRCFYERLPEG*ILGELK
Trigger: TTTCAGTTCTCCTAGGATGCACCCCTCAGGGAGCCT...TTCATAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp AGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGGTGTTTCTATGAATGCTCTTCATTGGGATaGTCAACGCGGACCACAAGC +
Preference number: 4 (lower is better)
Translates to: SWDRHLTGILDTGRCFYECSSLG*STRTTS
Trigger: GCTTGTGGTCCGCGTTGACCATCCCAATGAAGAGCA...TTCATAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp AGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATCTTAACCAGAGACCGAGGCTaGTACATATCCGCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: RFCKSENCNHMLGLRAILTRDRG*YISASA
Trigger: AGCACTTGCGGATATGTACCAGCCTCGGTCTCTGGT...TAAGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAGCTGCTCATCCTCTTaGATGCCTTGTTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: ISTRITCSHTPGRFCKSESCSSS*MPCSIR
Trigger: CCTTATGGAACAAGGCATCCAAGAGGATGAGCAGCT...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCGACAGTTTGCTAATGTaGTACTGTAGAGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGDSLLM*YCRAAK
Trigger: CTTTGCAGCTCTACAGTACCACATTAGCAAACTGTC...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp AGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGGTGTTTCTATGAAAGGAGCTGTCTGCCATaGTTTTGCCCTTCGATGCCA +
Preference number: 4 (lower is better)
Translates to: SWDRHLTGILDTGRCFYERSCLP*FCPSMP
Trigger: TGGCATCGAAGGGCAAAACCATGGCAGACAGCTCCT...TTCATAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAAGGGCGGCCAGCTGTTTaGATTTGTGTCTTTTTGCAC +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKGRPAV*ICVFLH
Trigger: GTGCAAAAAGACACAAATCCAAACAGCTGGCCGCCC...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp AACATAGATACCAAATCCAGGAGAACACAGACCAGCGATAAGAGGGACGCTTCCGGGCGGCCAGCTGTTTaGATTTGTGTCTTTTTGCAC +
Preference number: 4 (lower is better)
Translates to: NIDTKSRRTQTSDKRDASGRPAV*ICVFLH
Trigger: GTGCAAAAAGACACAAATCCAAACAGCTGGCCGCCC...GGAAGCGTCCCTCTTATCGCTGGTCTGTGTTCTCCTGGATTTGGTATCTATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTTTCATTCTGGTCCTTaGAGCGGGTGGACAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHIFHSGP*SGWTRK
Trigger: TTTTCTTGTCCACCCGCTCCAAGGACCAGAATGAAA...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAAGGTCAGTGGTCATCTTaGCAGGTATCACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKGQWSS*QVSLWT
Trigger: TGTCCACAGTGATACCTGCCAAGATGACCACTGACC...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAACAGGGATTAGTAACTTaGTTCCAAATTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKQGLVT*FQIFFL
Trigger: CAGGAAGAAAATTTGGAATCAAGTTACTAATCCCTG...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp AGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGGTGTTTCTATGAAAGACTGGAAGCCACCTaGGATGCAGAGTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: SWDRHLTGILDTGRCFYERLEAT*DAEFLF
Trigger: AAACAGGAACTCTGCATCTCAGGTGGCTTCCAGTCT...TTCATAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp AGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATCTTAAGACTGGAAGCCACCTaGGATGCAGAGTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: RFCKSENCNHMLGLRAILRLEAT*DAEFLF
Trigger: AAACAGGAACTCTGCATCTCAGGTGGCTTCCAGTCT...TAAGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAAGACATGGATCTGGGTTaGGAAATGGGTTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKDMDLG*EMGFPV
Trigger: GACAGGAAAACCCATTTCTCAACCCAGATCCATGTC...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATCTGCCCTTCTCTCCCTaGCCAGTTGGGATAGACACC +
Preference number: 4 (lower is better)
Translates to: FSIDLVMRQISTRITCSHLPFSP*PVGIDT
Trigger: GGTGTCTATCCCAACTGGTCAGGGAGAGAAGGGCAG...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp AGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGGTGTTTCTATGAAGGTGAAGAGAAGCTTTaGATCTGCCTGGACCCCATA +
Preference number: 4 (lower is better)
Translates to: SWDRHLTGILDTGRCFYEGEEKL*ICLDPI
Trigger: TATGGGGTCCAGGCAGATGCAAAGCTTCTCTTCACC...TTCATAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp AGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATCTTAAACTCGATGACCACCTaGCGGGTTTCCCAGTTTACA +
Preference number: 4 (lower is better)
Translates to: RFCKSENCNHMLGLRAILNSMTT*RVSQFT
Trigger: TGTAAACTGGGAAACCCGGCAGGTGGTCATCGAGTT...TAAGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp AACATAGATACCAAATCCAGGAGAACACAGACCAGCGATAAGAGGGACGCTTCCCCGCCAATGTACTCGTaGACAATCTTGCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: NIDTKSRRTQTSDKRDASPPMYS*TILQSA
Trigger: TGCAGATTGCAAGATTGTGCACGAGTACATTGGCGG...GGAAGCGTCCCTCTTATCGCTGGTCTGTGTTCTCCTGGATTTGGTATCTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAAAACTGTTGCTCTTCATTGGGATaGTCAACGCGGACCACAAGC +
Preference number: 4 (lower is better)
Translates to: ISLGCCCVSWKKRSPENCCSSLG*STRTTS
Trigger: GCTTGTGGTCCGCGTTGACCATCCCAATGAAGAGCA...ACAGTTTTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp ATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAAAACTGTTGGCAGGTATCACTGTaGACAGATGACACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: ISLGCCCVSWKKRSPENCWQVSL*TDDTEG
Trigger: GCCCTCAGTGTCATCTGTCCACAGTGATACCTGCCA...ACAGTTTTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp ATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACAAGTCTGTCTCTATGTaGCTCCCGGAATTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ITCSHTPGRFCKSENCNHKSVSM*LPELLR
Trigger: CCTCAGCAATTCCGGGAGCCACATAGAGACAGACTT...GTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp AGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATCTTACAGATACTCTCAGTGTaGCGTCTTTCTGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RFCKSENCNHMLGLRAILQILSV*RLSAAL
Trigger: AAGAGCAGCAGAAAGACGTCACACTGAGAGTATCTG...TAAGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp AGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATCTTAGACATGGATCTGGGTTaGGAAATGGGTTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RFCKSENCNHMLGLRAILDMDLG*EMGFPV
Trigger: GACAGGAAAACCCATTTCTCAACCCAGATCCATGTC...TAAGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp AGCACAGGGCAAAGTAAGGAAAGGGATGTGCCAGCAGTGGGTTTGAATGAGGATCTTCTCAGAGGGCTTTaGTGGAAAATAAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: STGQSKERDVPAVGLNEDLLRGL*WKIKQQ
Trigger: CTGTTGCTTTATTTTCCATCAAAGCCCTCTGAGAAG...ATCCTCATTCAAACCCACTGCTGGCACATCCCTTTCCTTACTTTGCCCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp AGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGGTGTTTCTATGAATGCCTAAACCACTTCTaGGCTTTAAGCAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SWDRHLTGILDTGRCFYECLNHF*ALSKAS
Trigger: TGAGGCCTTGCTTAAAGCTCAGAAGTGGTTTAGGCA...TTCATAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp ATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAAAACTGTTGTCTGCCATGGTTTTaGCCTTCGATGCCAACATGC +
Preference number: 4 (lower is better)
Translates to: ISLGCCCVSWKKRSPENCCLPWF*PSMPTC
Trigger: GCATGTTGGCATCGAAGGGCAAAACCATGGCAGACA...ACAGTTTTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGTGGAATCCCGGTGGCTaGATCAATTTTAATCAACCT +
Preference number: 4 (lower is better)
Translates to: ISTRITCSHTPGRFCKSEWNPGG*INFNQP
Trigger: AGGTTGATTAAAATTGATGCAGCCACCGGGATTCCA...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp AGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATCTTAAGCTGCTCATCCTCTTaGATGCCTTGTTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: RFCKSENCNHMLGLRAILSCSSS*MPCSIR
Trigger: CCTTATGGAACAAGGCATCCAAGAGGATGAGCAGCT...TAAGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp AAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTTCACAAAGGACTTACAGGCAGTAAAGACGTTTTaGTCAAACTCGATGACCACC +
Preference number: 4 (lower is better)
Translates to: KWVFLSPCVTHIFTKDLQAVKTF*SNSMTT
Trigger: GGTGGTCATCGAGTTTGACCAAAACGTCTTTACTGC...CTGTAAGTCCTTTGTGAAGATGTGGGTGACACAGGGGGACAGGAAAACCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp AACATAGATACCAAATCCAGGAGAACACAGACCAGCGATAAGAGGGACGCTTCCGCAGTAAAGACGTTTTaGTCAAACTCGATGACCACC +
Preference number: 4 (lower is better)
Translates to: NIDTKSRRTQTSDKRDASAVKTF*SNSMTT
Trigger: GGTGGTCATCGAGTTTGACCAAAACGTCTTTACTGC...GGAAGCGTCCCTCTTATCGCTGGTCTGTGTTCTCCTGGATTTGGTATCTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACGTCAGACCTTGGACATaGTGGTCTTTGAGAATGGGT +
Preference number: 4 (lower is better)
Translates to: ITCSHTPGRFCKSENCNHVRPWT*WSLRMG
Trigger: ACCCATTCTCAAAGACCACCATGTCCAAGGTCTGAC...GTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTTTCATCATAGGAATTTaGGTGACCTTTTGCACTCAG +
Preference number: 4 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTFIIGI*VTFCTQ
Trigger: CTGAGTGCAAAAGGTCACCCAAATTCCTATGATGAA...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp GTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGAAGTCTGACCAGTCTTaGGATATATTTGAGCATCAC +
Preference number: 4 (lower is better)
Translates to: VAIHLAGSASQRTVTTCWKSDQS*DIFEHH
Trigger: GTGATGCTCAAATATATCCCAAGACTGGTCAGACTT...CCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536936.1
CDS-3UTR TCA 90 bp ATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACTGTAAAGTCAGTGGATaGCAGCATTGTGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: ITCSHTPGRFCKSENCNHCKVSG*QHCGKC
Trigger: GCATTTGCCACAATGCTGTCATCCACTGACTTTACA...GTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp TTGTTTATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAATCAAAGGGCTGTCACTaGACCAAGTCATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LFISLGCCCVSWKKRSPESKGCH*TKSWWM
Trigger: CATCCACCATGACTTGGTTCAGTGACAGCCCTTTGA...TTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAATAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp GTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGCAGGGATTAGTAACTTaGTTCCAAATTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VAIHLAGSASQRTVTTCWQGLVT*FQIFFL
Trigger: CAGGAAGAAAATTTGGAATCAAGTTACTAATCCCTG...CCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp AGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATCTTATTTTGCACACCGTGGTaGCACAAAACATTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RFCKSENCNHMLGLRAILFCTPW*HKTFWV
Trigger: AACCCAGAATGTTTTGTGTCACCACGGTGTGCAAAA...TAAGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp GTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGAATCAACCTGTTATATaGAACTCCCAGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: VAIHLAGSASQRTVTTCWNQPVI*NSQNVI
Trigger: GATGACATTCTGGGAGTTTCATATAACAGGTTGATT...CCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp AGGCAGCTGTTAATTGGCTCACTCTCTCAAGGCAAGCACTGTCTCAAGGCAGTCTGTTCTTGCTACACGTaGTTTTTACCTTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RQLLIGSLSQGKHCLKAVCSCYT*FLPFCL
Trigger: AAGACAGAAAGGTAAAAATCACGTGTAGCAAGAACA...GACTGCCTTGAGACAGTGCTTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp GTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGTCATACCTGAGTTTGTaGAATAAGAGTTGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VAIHLAGSASQRTVTTCWSYLSL*NKSCSC
Trigger: GCAAGAACAACTCTTATTTCACAAACTCAGGTATGA...CCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp ATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAAAACTGTGCTAAGGAAGCATGTTaGACTGAAGGTCTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ISLGCCCVSWKKRSPENCAKEAC*TEGLAL
Trigger: CAAAGCCAGACCTTCAGTTCAACATGCTTCCTTAGC...ACAGTTTTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp TTGTTTATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAAAACCTCGGACTCGCCTaGAAAATCCTGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LFISLGCCCVSWKKRSPENLGLA*KILCFS
Trigger: GCTGAAACACAGGATTTTGCAGGCGAGTCCGAGGTT...TTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAATAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp ATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAAAACTGTCCGCCAATGTACTCGTaGACAATCTTGCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: ISLGCCCVSWKKRSPENCPPMYS*TILQSA
Trigger: TGCAGATTGCAAGATTGTGCACGAGTACATTGGCGG...ACAGTTTTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp ATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAAAACTGTACACCTGGCAGGTTCTaGAAGTCAGAGAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: ISLGCCCVSWKKRSPENCTPGRF*KSENCN
Trigger: GTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGT...ACAGTTTTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR GCA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTATTTCTTTGGGATGTTaGTGTGTGTCATGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTISLGC*CVSWKK
Trigger: TTTCTTCCATGACACACAGCAACATCCCAAAGAAAT...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp AGGCAGCTGTTAATTGGCTCACTCTCTCAAGGCAAGCACTGTCTCAAGGCAGTCAAGTCTGACCAGTCTTaGGATATATTGATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RQLLIGSLSQGKHCLKAVKSDQS*DILICS
Trigger: AGAACAGATCAATATATCCCAAGACTGGTCAGACTT...GACTGCCTTGAGACAGTGCTTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp AGGCAGCTGTTAATTGGCTCACTCTCTCAAGGCAAGCACTGTCTCAAGGCAGTCCCCAAGTTCTTTGTGTaGCAGAACATCTATGAAAAA +
Preference number: 4 (lower is better)
Translates to: RQLLIGSLSQGKHCLKAVPKFFV*QNIYEK
Trigger: TTTTTCATAGATGTTCTGCCACACAAAGAACTTGGG...GACTGCCTTGAGACAGTGCTTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp AGCACAGGGCAAAGTAAGGAAAGGGATGTGCCAGCAGTGGGTTTGAATGAGGATCAAGGAAAGCTCTTCTaGTCTTCTAATATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: STGQSKERDVPAVGLNEDQGKLF*SSNIQD
Trigger: ATCCTGAATATTAGAAGATCAGAAGAGCTTTCCTTG...ATCCTCATTCAAACCCACTGCTGGCACATCCCTTTCCTTACTTTGCCCTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp AGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATCTTATGGAATCCCGGTGGCTaGATCAATTTTAATCAACCT +
Preference number: 4 (lower is better)
Translates to: RFCKSENCNHMLGLRAILWNPGG*INFNQP
Trigger: AGGTTGATTAAAATTGATGCAGCCACCGGGATTCCA...TAAGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATCCATGTTTTCGAGACTaGAAGCCACCTGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: FSIDLVMRQISTRITCSHPCFRD*KPPEMQ
Trigger: CTGCATCTCAGGTGGCTTCCAGTCTCGAAAACATGG...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp GGACTGAGAAATGACCAACATCAAGTATATACGGTACACTTAGCACTTGTTTCTCTCTCCCTGACCAGTTaGGATAGACACCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: GLRNDQHQVYTVHLALVSLSLTS*DRHLTG
Trigger: TCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAG...AGAAACAAGTGCTAAGTGTACCGTATATACTTGATGTTGGTCATTTCTCAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATCAGATACTCTCAGTGTaGCGTCTTTCTGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: FSIDLVMRQISTRITCSHQILSV*RLSAAL
Trigger: AAGAGCAGCAGAAAGACGTCACACTGAGAGTATCTG...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATATCACTCCTCCAACATaGAGGTCTCCAGATACTCTC +
Preference number: 4 (lower is better)
Translates to: FSIDLVMRQISTRITCSHITPPT*RSPDTL
Trigger: GAGAGTATCTGGAGACCTTCATGTTGGAGGAGTGAT...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATCTAGCCAACCTGCATTaGGCTTGGCTTTATCAACCA +
Preference number: 4 (lower is better)
Translates to: FSIDLVMRQISTRITCSHLANLH*AWLYQP
Trigger: TGGTTGATAAAGCCAAGCTCAATGCAGGTTGGCTAG...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAATGTTCTTGCTACACGTaGTTTTTACCTTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: TLASREKVCVGTPSAILKCSCYT*FLPFCL
Trigger: AAGACAGAAAGGTAAAAATCACGTGTAGCAAGAACA...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATAGACCTTGGACATGGTaGTCTTTGAGAATGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FSIDLVMRQISTRITCSHRPWTW*SLRMGL
Trigger: CAGACCCATTCTCAAAGACCACCATGTCCAAGGTCT...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR TCA 90 bp AGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGGTGTTTCTATGAACAAGGAAAGCTCTTCTaGTCTTCTAATATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SWDRHLTGILDTGRCFYEQGKLF*SSNIQD
Trigger: ATCCTGAATATTAGAAGATCAGAAGAGCTTTCCTTG...TTCATAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR GCA 90 bp GGACTGAGAAATGACCAACATCAAGTATATACGGTACACTTAGCACTTGTTTCTAGTGTGACGTCTTTCTaGTGCTCTTCATTGGGATGG +
Preference number: 4 (lower is better)
Translates to: GLRNDQHQVYTVHLALVSSVTSF*CSSLGW
Trigger: CCATCCCAATGAAGAGCAGCAGAAAGACGTCACACT...AGAAACAAGTGCTAAGTGTACCGTATATACTTGATGTTGGTCATTTCTCAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CCA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATTTTCTTCTAAGAGAATaGCCCACCTGGCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: FSIDLVMRQISTRITCSHFLLRE*PTWLAH
Trigger: ATGAGCAAGCCAGGTGGGCCATTCTCTTAGAAGAAA...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATTTTCATTCTGGTCCTTaGAGCGGGTGGACAAGAAAA +
Preference number: 4 (lower is better)
Translates to: FSIDLVMRQISTRITCSHFHSGP*SGWTRK
Trigger: TTTTCTTGTCCACCCGCTCCAAGGACCAGAATGAAA...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CCA 90 bp ATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAAAACTGTAGGAGAACTGAAAAATaGGATTGGAGCTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: ISLGCCCVSWKKRSPENCRRTEK*DWSFCL
Trigger: AAGGCAAAAGCTCCAATCCCATTTTTCAGTTCTCCT...ACAGTTTTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATTCTGTTCTACTAACTTaGGCATCACTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: FSIDLVMRQISTRITCSHSVLLT*ASLLQH
Trigger: ATGTTGGAGGAGTGATGCTCAAGTTAGTAGAACAGA...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR TCA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATAATGTCAGACAACTATaGAAAGCTAAGGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: FSIDLVMRQISTRITCSHNVRQL*KAKEAC
Trigger: ACATGCTTCCTTAGCTTTTCATAGTTGTCTGACATT...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS CCA 90 bp CCCAGTGGCGGCGGCTGCTCAGCTAAGGCTGCGGCAGGTGAGGGCTaGAGCCAGGGCGAGCAGGCGAAGCTGCCTCGGGACCTCCCACGG +
Preference number: 5 (lower is better)
Translates to: PSGGGCSAKAAAGEG*SQGEQAKLPRDLPR
Trigger: CCGTGGGAGGTCCCGAGGCAGCTTCGCCTGCTCGCCCTGGCTCCAGCCCTCACCTGCCGCAGCCTTAGCTGAGCAGCCGCCGCCACTGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS GCA 90 bp CAGGAGCCCGTAGCGTCCAGCCTCGCAGTCGCGCACGTGGAGAGCTaGGTCCCTACAAACTACCCCGGGCCGAGCCGAGGAGCGGGCGCT +
Preference number: 5 (lower is better)
Translates to: QEPVASSLAVAHVES*VPTNYPGPSRGAGA
Trigger: AGCGCCCGCTCCTCGGCTCGGCCCGGGGTAGTTTGTAGGGACGCAGCTCTCCACGTGCGCGACTGCGAGGCTGGACGCTACGGGCTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS CCA 90 bp ACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTaGTGTGAGCCGAGCACGCGTGCTTGTTTCAATCCTGACCGCCGG +
Preference number: 5 (lower is better)
Translates to: TLGIPLGRGAFGLPC*CEPSTRACFNPDRR
Trigger: CCGGCGGTCAGGATTGAAACAAGCACGCGTGCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS-3UTR CAA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCGGGAGCTGTCAGACCTaGGACATGGTGGTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSGSCQT*DMVVFE
Trigger: CTCAAAGACCACCATGTCCAAGGTCTGACAGCTCCC...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCTGGACATGGTGGTCTTaGAGAATGGGTCTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSWTWWS*RMGLPF
Trigger: GAAGGGCAGACCCATTCTCAAAGACCACCATGTCCA...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCCATCCATTGGGCGTATaGATTCTCATGGTCACATCT +
Preference number: 5 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSHPLGV*ILMVTS
Trigger: AGATGTGACCATGAGAATCAATACGCCCAATGGATG...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCTGGATTTGTGTCTTTTaGCACACCGTGGTGACACAA +
Preference number: 5 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSWICVF*HTVVTQ
Trigger: TTGTGTCACCACGGTGTGCAAAAAGACACAAATCCA...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp ATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCGGGCGGCCAGCTGTTaGGATTTGTGTCTTTTTGCA +
Preference number: 5 (lower is better)
Translates to: IYMLGTLGIPLGRGAFGLRAASC*DLCLFA
Trigger: TGCAAAAAGACACAAATCCAAACAGCTGGCCGCCCG...CAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAATGGATGAACCGCAGCTaGGCTTCGACCAGGGGCATC +
Preference number: 5 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKWMNRS*ASTRGI
Trigger: GATGCCCCTGGTCGAAGCCAAGCTGCGGTTCATCCA...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp GGGCTTGCAGGTGGCCCCAGAAATCTGAGGAGACCAATGACTAAGACCAGATGTAGGGGCGCCTTTGGCTaGCCTTGTTGGTGTGAGCCG +
Preference number: 5 (lower is better)
Translates to: GLAGGPRNLRRPMTKTRCRGAFG*PCWCEP
Trigger: CGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCT...ACATCTGGTCTTAGTCATTGGTCTCCTCAGATTTCTGGGGCCACCTGCAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTGGGGAGGGGCGCCTTaGGCTTGCCTTGTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHIWGGAP*ACLVGV
Trigger: CACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCA...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp GGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTGGTGTGAGCCGAGCAGCGGTGAATGTATGTaGTCTGTTAGTCCAGAATCT +
Preference number: 5 (lower is better)
Translates to: GIPLGRGAFGLPCWCEPSSGECM*SVSPES
Trigger: AGATTCTGGACTAACAGACAACATACATTCACCGCT...GCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGTGGGGAGGGGCGCCTTaGGCTTGCCTTGTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: ISTRITCSHTPGRFCKSEWGGAP*ACLVGV
Trigger: CACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCA...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAAGCCACTCCTCTGACCTaGGGTTGTCAACTGCTACCT +
Preference number: 5 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKATPLT*GCQLLP
Trigger: AGGTAGCAGTTGACAACCCAAGGTCAGAGGAGTGGC...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS GCA 90 bp GACCTCTGGCTGGTAGGAGCTGTCTGCCATGGTTTTGCCCTTCGATaGCAACATGCAGGCAGCCATCCATTGGGCGTATTGATTCTCATG +
Preference number: 5 (lower is better)
Translates to: DLWLVGAVCHGFALR*QHAGSHPLGVLILM
Trigger: CATGAGAATCAATACGCCCAATGGATGGCTGCCTGCATGTTGGCATCGAAGGGCAAAACCATGGCAGACAGCTCCTACCAGCCAGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS-3UTR CAA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGTGGATGAACCGCAGCTaGGCTTCGACCAGGGGCATC +
Preference number: 5 (lower is better)
Translates to: ISTRITCSHTPGRFCKSEWMNRS*ASTRGI
Trigger: GATGCCCCTGGTCGAAGCCAAGCTGCGGTTCATCCA...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp AAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTTCACAAAGGACTTACAGAGGGGCGCCTTTGGCTaGCCTTGTTGGTGTGAGCCG +
Preference number: 5 (lower is better)
Translates to: KWVFLSPCVTHIFTKDLQRGAFG*PCWCEP
Trigger: CGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCT...CTGTAAGTCCTTTGTGAAGATGTGGGTGACACAGGGGGACAGGAAAACCCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCGCCACTCCTCTGACCTaGGGTTGTCAACTGCTACCT +
Preference number: 5 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGATPLT*GCQLLP
Trigger: AGGTAGCAGTTGACAACCCAAGGTCAGAGGAGTGGC...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp ATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGAGACATGGATCTGGGTaGAGAAATGGGTTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: IYMLGTLGIPLGRGAFGLRHGSG*RNGFSC
Trigger: ACAGGAAAACCCATTTCTCAACCCAGATCCATGTCT...CAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp ATCTACATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTTGTACACCCCAAGTTCTTaGTGTGGCAGAACATCTATG +
Preference number: 5 (lower is better)
Translates to: IYMLGTLGIPLGRGAFGLYTPSS*CGRTSM
Trigger: CATAGATGTTCTGCCACACAAAGAACTTGGGGTGTA...CAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCATGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS GCA 90 bp GCTGGTAGGAGCTGTCTGCCATGGTTTTGCCCTTCGATGCCAACATaGAGGCAGCCATCCATTGGGCGTATTGATTCTCATGGTCACATC +
Preference number: 5 (lower is better)
Translates to: AGRSCLPWFCPSMPT*RQPSIGRIDSHGHI
Trigger: GATGTGACCATGAGAATCAATACGCCCAATGGATGGCTGCCTGCATGTTGGCATCGAAGGGCAAAACCATGGCAGACAGCTCCTACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS-3UTR CAA 90 bp CTTCTCTCCCTGACCAGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCCGGGCGGCCAGCTGTTaGGATTTGTGTCTTTTTGCA +
Preference number: 5 (lower is better)
Translates to: LLSLTSWDRHLTGILDTGRAASC*DLCLFA
Trigger: TGCAAAAAGACACAAATCCAAACAGCTGGCCGCCCG...GCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACTGGTCAGGGAGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp AGGCAGCTGTTAATTGGCTCACTCTCTCAAGGCAAGCACTGTCTCAAGGCAGTCGTGCCAGCAGTGGGTTaGAATGAGGATCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: RQLLIGSLSQGKHCLKAVVPAVG*NEDLGD
Trigger: GTCACCCAGATCCTCATTCAAACCCACTGCTGGCAC...GACTGCCTTGAGACAGTGCTTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCGTGCCAGCAGTGGGTTaGAATGAGGATCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHIVPAVG*NEDLGD
Trigger: GTCACCCAGATCCTCATTCAAACCCACTGCTGGCAC...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp GTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGGGTCAGTGGTCATCTaGGCAGGTATCACTGTGGAC +
Preference number: 5 (lower is better)
Translates to: VAIHLAGSASQRTVTTCWGSVVI*AGITVD
Trigger: GTCCACAGTGATACCTGCCAAGATGACCACTGACCC...CCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp AGCACAGGGCAAAGTAAGGAAAGGGATGTGCCAGCAGTGGGTTTGAATGAGGATGGAATGGAATGGGGCTaGCAGGTGGCCCCAGAAATC +
Preference number: 5 (lower is better)
Translates to: STGQSKERDVPAVGLNEDGMEWG*QVAPEI
Trigger: GATTTCTGGGGCCACCTGCAAGCCCCATTCCATTCC...ATCCTCATTCAAACCCACTGCTGGCACATCCCTTTCCTTACTTTGCCCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp CAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCTCACTTCTCAGAGGGTGGACATGGTGGTCTTaGAGAATGGGTCTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: QVCLYVAPGIAEVSLLRGWTWWS*RMGLPF
Trigger: GAAGGGCAGACCCATTCTCAAAGACCACCATGTCCA...CCCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAAGGCTTGCTCATAGAGTaGGTTTATTCGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKGLLIE*VYSDSI
Trigger: GATGCTGTCCGAATAAACCAACTCTATGAGCAAGCC...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp GTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCAGGCAGCCATCCATaGGGCGTATTGATTCTCATG +
Preference number: 5 (lower is better)
Translates to: VAIHLAGSASQRTVTTCWAGSHP*GVLILM
Trigger: CATGAGAATCAATACGCCCAATGGATGGCTGCCTGC...CCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGGGGTCAGTGGTCATCTaGGCAGGTATCACTGTGGAC +
Preference number: 5 (lower is better)
Translates to: ISTRITCSHTPGRFCKSEGSVVI*AGITVD
Trigger: GTCCACAGTGATACCTGCCAAGATGACCACTGACCC...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp ACCTTGGCCTCCAGGGAAAAAGTGTGTGTAGGAACTCCCTCTGCCATTTTGAAATTCTGCTGCTCTTCATaGGGATGGTCAACGCGGACC +
Preference number: 5 (lower is better)
Translates to: TLASREKVCVGTPSAILKFCCSS*GWSTRT
Trigger: GGTCCGCGTTGACCATCCCAATGAAGAGCAGCAGAA...TTTCAAAATGGCAGAGGGAGTTCCTACACACACTTTTTCCCTGGAGGCCAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGGCAGGCAGCCATCCATaGGGCGTATTGATTCTCATG +
Preference number: 5 (lower is better)
Translates to: ISTRITCSHTPGRFCKSEAGSHP*GVLILM
Trigger: CATGAGAATCAATACGCCCAATGGATGGCTGCCTGC...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGCTGTCTGCCATGGTTTaGCCCTTCGATGCCAACATG +
Preference number: 5 (lower is better)
Translates to: ISTRITCSHTPGRFCKSELSAMV*PFDANM
Trigger: CATGTTGGCATCGAAGGGCAAAACCATGGCAGACAG...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCTACTCGTGCACAATCTaGCAATCTGCACTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHIYSCTI*QSALRQ
Trigger: CTGCCTGAGTGCAGATTGCAAGATTGTGCACGAGTA...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTTACTCGTGCACAATCTaGCAATCTGCACTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTYSCTI*QSALRQ
Trigger: CTGCCTGAGTGCAGATTGCAAGATTGTGCACGAGTA...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCGTTTCATTCTGGTCCTaGGAGCGGGTGGACAAGAAA +
Preference number: 5 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHIVSFWS*ERVDKK
Trigger: TTTCTTGTCCACCCGCTCCAAGGACCAGAATGAAAC...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp AGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGGTGTTTCTATGAAGGAATGGAATGGGGCTaGCAGGTGGCCCCAGAAATC +
Preference number: 5 (lower is better)
Translates to: SWDRHLTGILDTGRCFYEGMEWG*QVAPEI
Trigger: GATTTCTGGGGCCACCTGCAAGCCCCATTCCATTCC...TTCATAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp ATTCAGGCAGCTGTTAATTGGCTCACTCTCTCAAGGCAAGCACTGTCTCAAGGCATGTGGCTCCCGGAATaGCTGAGGTCTCACTTCTCA +
Preference number: 5 (lower is better)
Translates to: IQAAVNWLTLSRQALSQGMWLPE*LRSHFS
Trigger: TGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACAT...GCCTTGAGACAGTGCTTGCCTTGAGAGAGTGAGCCAATTAACAGCTGCCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp AACATAGATACCAAATCCAGGAGAACACAGACCAGCGATAAGAGGGACGCTTCCGAACCAGGGGGTCCCTaGCCAAGTCTGTCTCTATGT +
Preference number: 5 (lower is better)
Translates to: NIDTKSRRTQTSDKRDASEPGGP*PSLSLC
Trigger: ACATAGAGACAGACTTGGCAAGGGACCCCCTGGTTC...GGAAGCGTCCCTCTTATCGCTGGTCTGTGTTCTCCTGGATTTGGTATCTATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS CCA 90 bp CCAGATACTCTCAGTGTGACGTCTTTCTGCTGCTCTTCATTGGGATaGTCAACGCGGACCACAAGCTCCCAGGAAGCAAATGTAAAGTCA +
Preference number: 5 (lower is better)
Translates to: PDTLSVTSFCCSSLG*STRTTSSQEANVKS
Trigger: TGACTTTACATTTGCTTCCTGGGAGCTTGTGGTCCGCGTTGACCATCCCAATGAAGAGCAGCAGAAAGACGTCACACTGAGAGTATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000378844.1
ENST00000536936.1
CDS-3UTR CAA 90 bp ATCAGCACGAGGATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGCAGCTGCTCATCCTCTaGGATGCCTTGTTCCATAAG +
Preference number: 5 (lower is better)
Translates to: ISTRITCSHTPGRFCKSEQLLIL*DALFHK
Trigger: CTTATGGAACAAGGCATCCAAGAGGATGAGCAGCTG...CTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTATCCTCGTGCTGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp GTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGAATGGCCCACCTGGCTaGCTCATAGAGTTGGTTTAT +
Preference number: 5 (lower is better)
Translates to: VAIHLAGSASQRTVTTCWNGPPG*LIELVY
Trigger: ATAAACCAACTCTATGAGCAAGCCAGGTGGGCCATT...CCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp AACATAGATACCAAATCCAGGAGAACACAGACCAGCGATAAGAGGGACGCTTCCCTGTCTGCCATGGTTTaGCCCTTCGATGCCAACATG +
Preference number: 5 (lower is better)
Translates to: NIDTKSRRTQTSDKRDASLSAMV*PFDANM
Trigger: CATGTTGGCATCGAAGGGCAAAACCATGGCAGACAG...GGAAGCGTCCCTCTTATCGCTGGTCTGTGTTCTCCTGGATTTGGTATCTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp CAAGTCTGTCTCTATGTGGCTCCCGGAATTGCTGAGGTCTCACTTCTCAGAGGGAGCAGTAAAGACGTTTaGGTCAAACTCGATGACCAC +
Preference number: 5 (lower is better)
Translates to: QVCLYVAPGIAEVSLLRGSSKDV*VKLDDH
Trigger: GTGGTCATCGAGTTTGACCAAAACGTCTTTACTGCT...CCCTCTGAGAAGTGAGACCTCAGCAATTCCGGGAGCCACATAGAGACAGACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp GAACACAGACCAGCGATAAGAGGGACGCTTCCCCATGACCCAGACCAGCCTAAAAGCGGTGAATGTATGTaGTCTGTTAGTCCAGAATCT +
Preference number: 5 (lower is better)
Translates to: EHRPAIRGTLPHDPDQPKSGECM*SVSPES
Trigger: AGATTCTGGACTAACAGACAACATACATTCACCGCT...TTTAGGCTGGTCTGGGTCATGGGGAAGCGTCCCTCTTATCGCTGGTCTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp AGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGGTGTTTCTATGAAGGGAGCTGTCAGACCTaGGACATGGTGGTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: SWDRHLTGILDTGRCFYEGSCQT*DMVVFE
Trigger: CTCAAAGACCACCATGTCCAAGGTCTGACAGCTCCC...TTCATAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTATGGGATTGGAGCTTTaGCCTTATCCTTACACCCCA +
Preference number: 5 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTMGLEL*PYPYTP
Trigger: TGGGGTGTAAGGATAAGGCAAAAGCTCCAATCCCAT...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS TCA 90 bp GAGATGCAGAGTTCCTGTTTTTCATCCTCAGAAATGAAAGGATGTTaGGGACCTCTGGCTGGTAGGAGCTGTCTGCCATGGTTTTGCCCT +
Preference number: 5 (lower is better)
Translates to: EMQSSCFSSSEMKGC*GPLAGRSCLPWFCP
Trigger: AGGGCAAAACCATGGCAGACAGCTCCTACCAGCCAGAGGTCCTCAACATCCTTTCATTTCTGAGGATGAAAAACAGGAACTCTGCATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS-3UTR CAA 90 bp ATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACGAGGATGCTGCAGTTTaGTTCCGTCAAAGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: ITCSHTPGRFCKSENCNHEDAAV*FRQRAV
Trigger: GACAGCCCTTTGACGGAACAAAACTGCAGCATCCTC...GTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp AGCACAGGGCAAAGTAAGGAAAGGGATGTGCCAGCAGTGGGTTTGAATGAGGATCAACCTGCATTGAGCTaGGCTTTATCAACCAGAGAC +
Preference number: 5 (lower is better)
Translates to: STGQSKERDVPAVGLNEDQPALS*ALSTRD
Trigger: GTCTCTGGTTGATAAAGCCAAGCTCAATGCAGGTTG...ATCCTCATTCAAACCCACTGCTGGCACATCCCTTTCCTTACTTTGCCCTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp ACATGGATCTGGGTTGAGAAATGGGTTTTCCTGTCCCCCTGTGTCACCCACATCCTTCTGGTATTGCTTTaGACCTTCTCAAAACCCACC +
Preference number: 5 (lower is better)
Translates to: TWIWVEKWVFLSPCVTHILLVLL*TFSKPT
Trigger: GGTGGGTTTTGAGAAGGTCAAAAGCAATACCAGAAG...GATGTGGGTGACACAGGGGGACAGGAAAACCCATTTCTCAACCCAGATCCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp AACATAGATACCAAATCCAGGAGAACACAGACCAGCGATAAGAGGGACGCTTCCTCTAGCCAACCTGCATaGAGCTTGGCTTTATCAACC +
Preference number: 5 (lower is better)
Translates to: NIDTKSRRTQTSDKRDASSSQPA*SLALST
Trigger: GGTTGATAAAGCCAAGCTCAATGCAGGTTGGCTAGA...GGAAGCGTCCCTCTTATCGCTGGTCTGTGTTCTCCTGGATTTGGTATCTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTGCAGACAACGACAGTTaGCTAATGTGGTACTGTAGA +
Preference number: 5 (lower is better)
Translates to: SLTLAGVSMNREDCACLPADNDS*LMWYCR
Trigger: TCTACAGTACCACATTAGCAAACTGTCGTTGTCTGC...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTCATCCATTGGGCGTATaGATTCTCATGGTCACATCT +
Preference number: 5 (lower is better)
Translates to: SLTLAGVSMNREDCACLPHPLGV*ILMVTS
Trigger: AGATGTGACCATGAGAATCAATACGCCCAATGGATG...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp GGGCTTGCAGGTGGCCCCAGAAATCTGAGGAGACCAATGACTAAGACCAGATGTTTTCATCATAGGAATTaGGGTGACCTTTTGCACTCA +
Preference number: 5 (lower is better)
Translates to: GLAGGPRNLRRPMTKTRCFHHRN*GDLLHS
Trigger: TGAGTGCAAAAGGTCACCCAAATTCCTATGATGAAA...ACATCTGGTCTTAGTCATTGGTCTCCTCAGATTTCTGGGGCCACCTGCAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp ATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACGGCTTGCTCATAGAGTaGGTTTATTCGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: ITCSHTPGRFCKSENCNHGLLIE*VYSDSI
Trigger: GATGCTGTCCGAATAAACCAACTCTATGAGCAAGCC...GTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp AGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATCTTAAATGGCCCACCTGGCTaGCTCATAGAGTTGGTTTAT +
Preference number: 5 (lower is better)
Translates to: RFCKSENCNHMLGLRAILNGPPG*LIELVY
Trigger: ATAAACCAACTCTATGAGCAAGCCAGGTGGGCCATT...TAAGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS GCA 90 bp CAAATTAGAAAGCGCCGCTTCTATTTCATCAACCTCGGACTCGCCTaGAAAATCCTGTGTTTCAGCAGACAACGACAGTTTGCTAATGTG +
Preference number: 5 (lower is better)
Translates to: QIRKRRFYFINLGLA*KILCFSRQRQFANV
Trigger: CACATTAGCAAACTGTCGTTGTCTGCTGAAACACAGGATTTTGCAGGCGAGTCCGAGGTTGATGAAATAGAAGCGGCGCTTTCTAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp GGACTGAGAAATGACCAACATCAAGTATATACGGTACACTTAGCACTTGTTTCTTTCTGCTGCTCTTCATaGGGATGGTCAACGCGGACC +
Preference number: 5 (lower is better)
Translates to: GLRNDQHQVYTVHLALVSFCCSS*GWSTRT
Trigger: GGTCCGCGTTGACCATCCCAATGAAGAGCAGCAGAA...AGAAACAAGTGCTAAGTGTACCGTATATACTTGATGTTGGTCATTTCTCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp ATAACTTGTAGCCATACACCTGGCAGGTTCTGCAAGTCAGAGAACTGTAACCACGCAGACAACGACAGTTaGCTAATGTGGTACTGTAGA +
Preference number: 5 (lower is better)
Translates to: ITCSHTPGRFCKSENCNHADNDS*LMWYCR
Trigger: TCTACAGTACCACATTAGCAAACTGTCGTTGTCTGC...GTGGTTACAGTTCTCTGACTTGCAGAACCTGCCAGGTGTATGGCTACAAGTTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp AGTTGGGATAGACACCTGACTGGAATCCTTGACACTGGCAGGTGTTTCTATGAAAGCAGTAAAGACGTTTaGGTCAAACTCGATGACCAC +
Preference number: 5 (lower is better)
Translates to: SWDRHLTGILDTGRCFYESSKDV*VKLDDH
Trigger: GTGGTCATCGAGTTTGACCAAAACGTCTTTACTGCT...TTCATAGAAACACCTGCCAGTGTCAAGGATTCCAGTCAGGTGTCTATCCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp AGGTTCTGCAAGTCAGAGAACTGTAACCACATGCTGGGCCTTAGAGCAATCTTAAGACATGGATCTGGGTaGAGAAATGGGTTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: RFCKSENCNHMLGLRAILRHGSG*RNGFSC
Trigger: ACAGGAAAACCCATTTCTCAACCCAGATCCATGTCT...TAAGATTGCTCTAAGGCCCAGCATGTGGTTACAGTTCTCTGACTTGCAGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp TCCTTGACACTGGCAGGTGTTTCTATGAACAGAGAGGACTGTGCCTGTCTTCCTACTTCTCAGAGGGCTTaGATGGAAAATAAAGCAACA +
Preference number: 5 (lower is better)
Translates to: SLTLAGVSMNREDCACLPTSQRA*MENKAT
Trigger: TGTTGCTTTATTTTCCATCAAAGCCCTCTGAGAAGT...AGGAAGACAGGCACAGTCCTCTCTGTTCATAGAAACACCTGCCAGTGTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp CCAGATGTGGGTCAGTGGTCATCTTGGCAGGTATCACTGTGGACAGATGACACTACAAAGTTGGTTCCTTaGTTTTCATGGAAATGTCAG +
Preference number: 5 (lower is better)
Translates to: PDVGQWSSWQVSLWTDDTTKLVP*FSWKCQ
Trigger: CTGACATTTCCATGAAAACAAAGGAACCAACTTTGT...AGTGTCATCTGTCCACAGTGATACCTGCCAAGATGACCACTGACCCACATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp AACATAGATACCAAATCCAGGAGAACACAGACCAGCGATAAGAGGGACGCTTCCAGTCTTGGGATATATTaGAGCATCACTCCTCCAACA +
Preference number: 5 (lower is better)
Translates to: NIDTKSRRTQTSDKRDASSLGIY*SITPPT
Trigger: TGTTGGAGGAGTGATGCTCAAATATATCCCAAGACT...GGAAGCGTCCCTCTTATCGCTGGTCTGTGTTCTCCTGGATTTGGTATCTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536936.1
CDS TCA 90 bp ATTCAGGATTTTGCAGATATCACTGACAGCTTTAAAAACCACAGCTaGGAAGCTGACTCGCAACCTCACCATCTTCAAATTCGGCAGACG +
Preference number: 5 (lower is better)
Translates to: IQDFADITDSFKNHS*EADSQPHHLQIRQT
Trigger: CGTCTGCCGAATTTGAAGATGGTGAGGTTGCGAGTCAGCTTCTCAGCTGTGGTTTTTAAAGCTGTCAGTGATATCTGCAAAATCCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000378844.1
ENST00000536936.1
CDS-3UTR CAA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATCAGCTGCTCATCCTCTaGGATGCCTTGTTCCATAAG +
Preference number: 5 (lower is better)
Translates to: FSIDLVMRQISTRITCSHQLLIL*DALFHK
Trigger: CTTATGGAACAAGGCATCCAAGAGGATGAGCAGCTG...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS TCA 90 bp GATATATTGATCTGTTCTACTAACTTGAGCATCACTCCTCCAACATaGAGGTCTCCAGATACTCTCAGTGTGACGTCTTTCTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: DILICSTNLSITPPT*RSPDTLSVTSFCCS
Trigger: AGAGCAGCAGAAAGACGTCACACTGAGAGTATCTGGAGACCTTCATGTTGGAGGAGTGATGCTCAAGTTAGTAGAACAGATCAATATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000378844.1
CDS-3UTR CAA 90 bp GGACTGAGAAATGACCAACATCAAGTATATACGGTACACTTAGCACTTGTTTCTGTTTCATTCTGGTCCTaGGAGCGGGTGGACAAGAAA +
Preference number: 5 (lower is better)
Translates to: GLRNDQHQVYTVHLALVSVSFWS*ERVDKK
Trigger: TTTCTTGTCCACCCGCTCCAAGGACCAGAATGAAAC...AGAAACAAGTGCTAAGTGTACCGTATATACTTGATGTTGGTCATTTCTCAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS TCA 90 bp AAACATTCTGGGTTCATATCCATGTTTTCGAGACTGGAAGCCACCTaGGATGCAGAGTTCCTGTTTTTCATCCTCAGAAATGAAAGGATG +
Preference number: 5 (lower is better)
Translates to: KHSGFISMFSRLEAT*DAEFLFFILRNERM
Trigger: CATCCTTTCATTTCTGAGGATGAAAAACAGGAACTCTGCATCTCAGGTGGCTTCCAGTCTCGAAAACATGGATATGAACCCAGAATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS-3UTR CAA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATTGGATTTGTGTCTTTTaGCACACCGTGGTGACACAA +
Preference number: 5 (lower is better)
Translates to: FSIDLVMRQISTRITCSHWICVF*HTVVTQ
Trigger: TTGTGTCACCACGGTGTGCAAAAAGACACAAATCCA...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS-3UTR CAA 90 bp TTCTCCATTGACTTAGTAATGAGACAGATCAGCACGAGGATAACTTGTAGCCATATCTGTTCTACTAACTaGAGCATCACTCCTCCAACA +
Preference number: 5 (lower is better)
Translates to: FSIDLVMRQISTRITCSHICSTN*SITPPT
Trigger: TGTTGGAGGAGTGATGCTCAAGTTAGTAGAACAGAT...ATGGCTACAAGTTATCCTCGTGCTGATCTGTCTCATTACTAAGTCAATGGAGAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp GGACTGAGAAATGACCAACATCAAGTATATACGGTACACTTAGCACTTGTTTCTATGAACCTGAAGCTGTaGGAGAACTCTCCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: GLRNDQHQVYTVHLALVSMNLKL*ENSPGL
Trigger: TAAACCTGGAGAGTTCTCCAACAGCTTCAGGTTCAT...AGAAACAAGTGCTAAGTGTACCGTATATACTTGATGTTGGTCATTTCTCAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp TTGTTTATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAATATTTCTTTGGGATGTaGCTGTGTGTCATGGAAGAA +
Preference number: 5 (lower is better)
Translates to: LFISLGCCCVSWKKRSPEYFFGM*LCVMEE
Trigger: TTCTTCCATGACACACAGCAACATCCCAAAGAAATA...TTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAATAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS-3UTR CAA 90 bp TTGTTTATTTCTTTGGGATGTTGCTGTGTGTCATGGAAGAAACGCTCCCCTGAACAGTCTTGGGATATATaGATCTGTTCTACTAACTTG +
Preference number: 5 (lower is better)
Translates to: LFISLGCCCVSWKKRSPEQSWDI*ICSTNL
Trigger: CAAGTTAGTAGAACAGATCAATATATCCCAAGACTG...TTCAGGGGAGCGTTTCTTCCATGACACACAGCAACATCCCAAAGAAATAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS CCA 72 bp GGCGGCTGCTCAGCTAAGGCTGCGGCAGGTGAGGGCTaGAGCCAGGGCGAGCAGGCGAAGCTGCCTCGGGAC +
Preference number: 6 (lower is better)
Translates to: GGCSAKAAAGEG*SQGEQAKLPRD
Trigger: GTCCCGAGGCAGCTTCGCCTGCTCGCCCTGGCTCCAGCCCTCACCTGCCGCAGCCTTAGCTGAGCAGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS GCA 72 bp GTAGCGTCCAGCCTCGCAGTCGCGCACGTGGAGAGCTaGGTCCCTACAAACTACCCCGGGCCGAGCCGAGGA +
Preference number: 6 (lower is better)
Translates to: VASSLAVAHVES*VPTNYPGPSRG
Trigger: TCCTCGGCTCGGCCCGGGGTAGTTTGTAGGGACGCAGCTCTCCACGTGCGCGACTGCGAGGCTGGACGCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS CAA 90 bp ATGCTGGGCACGTTAGGGATCCCTCTGGGGAGGGGCGCCTTTGGCTaGCCTTGTTGGTGTGAGCCGAGCACGCGTGCTTGTTTCAATCCT +
Preference number: 6 (lower is better)
Translates to: MLGTLGIPLGRGAFG*PCWCEPSTRACFNP
Trigger: AGGATTGAAACAAGCACGCGTGCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGATCCCTAACGTGCCCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS CCA 72 bp ATCCCTCTGGGGAGGGGCGCCTTTGGCTTGCCTTGTTaGTGTGAGCCGAGCACGCGTGCTTGTTTCAATCCT +
Preference number: 6 (lower is better)
Translates to: IPLGRGAFGLPC*CEPSTRACFNP
Trigger: AGGATTGAAACAAGCACGCGTGCTCGGCTCACACCAACAAGGCAAGCCAAAGGCGCCCCTCCCCAGAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS GCA 72 bp GGACCTCTGGCTGGTAGGAGCTGTCTGCCATGGTTTTaGCCTTCGATGCCAACATGCAGGCAGCCATCCATT +
Preference number: 6 (lower is better)
Translates to: GPLAGRSCLPWF*PSMPTCRQPSI
Trigger: AATGGATGGCTGCCTGCATGTTGGCATCGAAGGGCAAAACCATGGCAGACAGCTCCTACCAGCCAGAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS GCA 72 bp CTGGTAGGAGCTGTCTGCCATGGTTTTGCCCTTCGATaGCAACATGCAGGCAGCCATCCATTGGGCGTATTG +
Preference number: 6 (lower is better)
Translates to: LVGAVCHGFALR*QHAGSHPLGVL
Trigger: CAATACGCCCAATGGATGGCTGCCTGCATGTTGGCATCGAAGGGCAAAACCATGGCAGACAGCTCCTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS CCA 72 bp GCATTGAGCTTGGCTTTATCAACCAGAGACCGAGGCTaGTACATATCCGCAAGTGCTTCTGGGGACTGGGGG +
Preference number: 6 (lower is better)
Translates to: ALSLALSTRDRG*YISASASGDWG
Trigger: CCCCCAGTCCCCAGAAGCACTTGCGGATATGTACCAGCCTCGGTCTCTGGTTGATAAAGCCAAGCTCAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS GCA 72 bp AGGTCTCCAGATACTCTCAGTGTGACGTCTTTCTGCTaGTCTTCATTGGGATGGTCAACGCGGACCACAAGC +
Preference number: 6 (lower is better)
Translates to: RSPDTLSVTSFC*SSLGWSTRTTS
Trigger: GCTTGTGGTCCGCGTTGACCATCCCAATGAAGAGCAGCAGAAAGACGTCACACTGAGAGTATCTGGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000378844.1
ENST00000536936.1
CDS CCA 72 bp CTCAGTGTGACGTCTTTCTGCTGCTCTTCATTGGGATaGTCAACGCGGACCACAAGCTCCCAGGAAGCAAAT +
Preference number: 6 (lower is better)
Translates to: LSVTSFCCSSLG*STRTTSSQEAN
Trigger: ATTTGCTTCCTGGGAGCTTGTGGTCCGCGTTGACCATCCCAATGAAGAGCAGCAGAAAGACGTCACACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000378844.1
ENST00000536936.1
CDS CAA 72 bp GATACTCTCAGTGTGACGTCTTTCTGCTGCTCTTCATaGGGATGGTCAACGCGGACCACAAGCTCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: DTLSVTSFCCSS*GWSTRTTSSQE
Trigger: TTCCTGGGAGCTTGTGGTCCGCGTTGACCATCCCAATGAAGAGCAGCAGAAAGACGTCACACTGAGAGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000378844.1
ENST00000536936.1
CDS CAA 90 bp AGGTCTCCAGATACTCTCAGTGTGACGTCTTTCTGCTGCTCTTCATaGGGATGGTCAACGCGGACCACAAGCTCCCAGGAAGCAAATGTA +
Preference number: 6 (lower is better)
Translates to: RSPDTLSVTSFCCSS*GWSTRTTSSQEANV
Trigger: TACATTTGCTTCCTGGGAGCTTGTGGTCCGCGTTGACCATCCCAATGAAGAGCAGCAGAAAGACGTCACACTGAGAGTATCTGGAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000378844.1
ENST00000536936.1
CDS GCA 72 bp AGCTGTCTGCCATGGTTTTGCCCTTCGATGCCAACATaGAGGCAGCCATCCATTGGGCGTATTGATTCTCAT +
Preference number: 6 (lower is better)
Translates to: SCLPWFCPSMPT*RQPSIGRIDSH
Trigger: ATGAGAATCAATACGCCCAATGGATGGCTGCCTGCATGTTGGCATCGAAGGGCAAAACCATGGCAGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS CAA 72 bp GGATCCGGGCGGCCAGCTGTTTGGATTTGTGTCTTTTaGCACACCGTGGTGACACAAAACATTCTGGGTTCA +
Preference number: 6 (lower is better)
Translates to: GSGRPAVWICVF*HTVVTQNILGS
Trigger: TGAACCCAGAATGTTTTGTGTCACCACGGTGTGCAAAAAGACACAAATCCAAACAGCTGGCCGCCCGGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS TCA 72 bp GGATGCTGCAGTTTTGTTCCGTCAAAGGGCTGTCACTaGACCAAGTCATGGTGGATGATGCTGGTGTTCCAT +
Preference number: 6 (lower is better)
Translates to: GCCSFVPSKGCH*TKSWWMMLVFH
Trigger: ATGGAACACCAGCATCATCCACCATGACTTGGTTCAGTGACAGCCCTTTGACGGAACAAAACTGCAGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217289.9
CDS CCA 72 bp GGAACAAGTCCTCATCGAGTGTTTCATTCTGGTCCTTaGAGCGGGTGGACAAGAAAATGTAGCCGCCAATGT +
Preference number: 6 (lower is better)
Translates to: GTSPHRVFHSGP*SGWTRKCSRQC
Trigger: ACATTGGCGGCTACATTTTCTTGTCCACCCGCTCCAAGGACCAGAATGAAACACTCGATGAGGACTTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS TCA 72 bp CACAAGCTCCCAGGAAGCAAATGTAAAGTCAGTGGATaGCAGCATTGTGGCAAATGCTGGTGTCTCCTTTCC +
Preference number: 6 (lower is better)
Translates to: HKLPGSKCKVSG*QHCGKCWCLLS
Trigger: GGAAAGGAGACACCAGCATTTGCCACAATGCTGTCATCCACTGACTTTACATTTGCTTCCTGGGAGCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS TCA 72 bp CTCCTCCAACATGAAGGTCTCCAGATACTCTCAGTGTaGCGTCTTTCTGCTGCTCTTCATTGGGATGGTCAA +
Preference number: 6 (lower is better)
Translates to: LLQHEGLQILSV*RLSAALHWDGQ
Trigger: TTGACCATCCCAATGAAGAGCAGCAGAAAGACGTCACACTGAGAGTATCTGGAGACCTTCATGTTGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000378844.1
ENST00000536936.1
CDS GCA 72 bp AAGCGCCGCTTCTATTTCATCAACCTCGGACTCGCCTaGAAAATCCTGTGTTTCAGCAGACAACGACAGTTT +
Preference number: 6 (lower is better)
Translates to: KRRFYFINLGLA*KILCFSRQRQF
Trigger: AAACTGTCGTTGTCTGCTGAAACACAGGATTTTGCAGGCGAGTCCGAGGTTGATGAAATAGAAGCGGCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS GCA 72 bp GTAGCCGCCAATGTACTCGTGCACAATCTTGCAATCTaGACTCAGGCAGGTGAAAGCAGTAAAGACGTTTTG +
Preference number: 6 (lower is better)
Translates to: VAANVLVHNLAI*TQAGESSKDVL
Trigger: CAAAACGTCTTTACTGCTTTCACCTGCCTGAGTGCAGATTGCAAGATTGTGCACGAGTACATTGGCGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS CAA 72 bp TTTGCCCTTCGATGCCAACATGCAGGCAGCCATCCATaGGGCGTATTGATTCTCATGGTCACATCTCAAATA +
Preference number: 6 (lower is better)
Translates to: FALRCQHAGSHP*GVLILMVTSQI
Trigger: TATTTGAGATGTGACCATGAGAATCAATACGCCCAATGGATGGCTGCCTGCATGTTGGCATCGAAGGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS TCA 72 bp ATCTGTTCTACTAACTTGAGCATCACTCCTCCAACATaGAGGTCTCCAGATACTCTCAGTGTGACGTCTTTC +
Preference number: 6 (lower is better)
Translates to: ICSTNLSITPPT*RSPDTLSVTSF
Trigger: GAAAGACGTCACACTGAGAGTATCTGGAGACCTTCATGTTGGAGGAGTGATGCTCAAGTTAGTAGAACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000378844.1
CDS TCA 72 bp AGTCTTGGGATATATTTGAGCATCACTCCTCCAACATaGAGGTCTCCAGATACTCTCAGTGTGACGTCTTTC +
Preference number: 6 (lower is better)
Translates to: SLGIYLSITPPT*RSPDTLSVTSF
Trigger: GAAAGACGTCACACTGAGAGTATCTGGAGACCTTCATGTTGGAGGAGTGATGCTCAAATATATCCCAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536936.1
CDS CAA 72 bp CCTGCAAAATCCTGTGTTTCAGCAGACAACGACAGTTaGCTAATGTGGTACTGTAGAGCTGCAAAGATCAAC +
Preference number: 6 (lower is better)
Translates to: PAKSCVSADNDS*LMWYCRAAKIN
Trigger: GTTGATCTTTGCAGCTCTACAGTACCACATTAGCAAACTGTCGTTGTCTGCTGAAACACAGGATTTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS CAA 72 bp CGTGAGGAGTCTAGCCAACTGATGAACCTGAAGCTGTaGGAGAACTCTCCAGGTTTAGAATATCTTCAATTA +
Preference number: 6 (lower is better)
Translates to: REESSQLMNLKL*ENSPGLEYLQL
Trigger: TAATTGAAGATATTCTAAACCTGGAGAGTTCTCCAACAGCTTCAGGTTCATCAGTTGGCTAGACTCCTCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536936.1
CDS TCA 72 bp TTTGCAGATATCACTGACAGCTTTAAAAACCACAGCTaGGAAGCTGACTCGCAACCTCACCATCTTCAAATT +
Preference number: 6 (lower is better)
Translates to: FADITDSFKNHS*EADSQPHHLQI
Trigger: AATTTGAAGATGGTGAGGTTGCGAGTCAGCTTCTCAGCTGTGGTTTTTAAAGCTGTCAGTGATATCTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000378844.1
ENST00000536936.1
CDS CCA 72 bp TTTCTTCCTCTGTGCAATCAATTTCTTCTAAGAGAATaGCCCACCTGGCTTGCTCATAGAGTTGGTTTATTC +
Preference number: 6 (lower is better)
Translates to: FLPLCNQFLLRE*PTWLAHRVGLF
Trigger: GAATAAACCAACTCTATGAGCAAGCCAGGTGGGCCATTCTCTTAGAAGAAATTGATTGCACAGAGGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217289.9
ENST00000536936.1
CDS CCA 72 bp CCACTGTTTGATATTTGTGAATCTCCATGTTGTCACTaGAATCCCGGTGGCTGCATCAATTTTAATCAACCT +
Preference number: 6 (lower is better)
Translates to: PLFDICESPCCH*NPGGCINFNQP
Trigger: AGGTTGATTAAAATTGATGCAGCCACCGGGATTCCAGTGACAACATGGAGATTCACAAATATCAAACAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS CAA 90 bp CTCAAATACATTTCATTCATACCATCGGCAACAGGGATTAGTAACTaGATTCCAAATTTTCTTCCTGCTACATTTACATCGGGCACAACT +
Preference number: 6 (lower is better)
Translates to: LKYISFIPSATGISN*IPNFLPATFTSGTT
Trigger: AGTTGTGCCCGATGTAAATGTAGCAGGAAGAAAATTTGGAATCAAGTTACTAATCCCTGTTGCCGATGGTATGAATGAAATGTATTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS TCA 72 bp TTTCATTCATACCATCGGCAACAGGGATTAGTAACTTaGTTCCAAATTTTCTTCCTGCTACATTTACATCGG +
Preference number: 6 (lower is better)
Translates to: FHSYHRQQGLVT*FQIFFLLHLHR
Trigger: CCGATGTAAATGTAGCAGGAAGAAAATTTGGAATCAAGTTACTAATCCCTGTTGCCGATGGTATGAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217289.9
ENST00000478194.1
ENST00000536936.1
CDS CAA 72 bp TGTATAAACCAGGACTTACTGATGAACCTGAAGCTGTaGGAGAACTCTCCAGGTTTAGAATATCTTCAATTA +
Preference number: 6 (lower is better)
Translates to: CINQDLLMNLKL*ENSPGLEYLQL
Trigger: TAATTGAAGATATTCTAAACCTGGAGAGTTCTCCAACAGCTTCAGGTTCATCAGTAAGTCCTGGTTTATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217289.9