Pregenerated sensors for FDPS (Homo sapiens)
Ensembl gene IDs: ENSG00000160752Ensembl transcript IDs: ENST00000356657.10, ENST00000368356.9, ENST00000447866.5, ENST00000461507.5, ENST00000465559.5, ENST00000467076.5, ENST00000468479.5, ENST00000470171.5, ENST00000471117.5, ENST00000474345.5, ENST00000477057.5, ENST00000487002.1, ENST00000489003.5, ENST00000490140.1, ENST00000491013.5, ENST00000495308.5, ENST00000611010.4, ENST00000612683.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGGCACCAGCAGCGGGCACTGTGCCAGGCCAGGACTGGGTACCCGTaGACCAGGGAGGGCCGCCGTAGGGAACCCAGCCACCTCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: WHQQRALCQARTGYP*TREGRRREPSHLSR Trigger: CCGGGAGAGGTGGCTGGGTTCCCTACGGCGGCCCTCCCTGGTGCACGGGTACCCAGTCCTGGCCTGGCACAGTGCCCGCTGCTGGTGCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000356657.10 ENST00000368356.9 ENST00000465559.5 ENST00000487002.1 ENST00000491013.5 |
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| CDS GCA 90 bp | GCTCGAGGTTCCTCTGTCCACGCTTGGCACCAGCAGCGGGCACTGTaGCAGGCCAGGACTGGGTACCCGTGCACCAGGGAGGGCCGCCGT | + |
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Preference number: 5 (lower is better) Translates to: ARGSSVHAWHQQRAL*QARTGYPCTREGRR Trigger: ACGGCGGCCCTCCCTGGTGCACGGGTACCCAGTCCTGGCCTGGCACAGTGCCCGCTGCTGGTGCCAAGCGTGGACAGAGGAACCTCGAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356657.10 ENST00000368356.9 ENST00000465559.5 ENST00000491013.5 |
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| CDS GCA 90 bp | CACCGAGGTTCCTCTGTCCACGCTTGGCACCAGCAGCGGGCACTGTaGCAGGCCAGGACTGGGTACCCGTGCACCAGGGAGGGCCGCCGT | + |
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Preference number: 5 (lower is better) Translates to: HRGSSVHAWHQQRAL*QARTGYPCTREGRR Trigger: ACGGCGGCCCTCCCTGGTGCACGGGTACCCAGTCCTGGCCTGGCACAGTGCCCGCTGCTGGTGCCAAGCGTGGACAGAGGAACCTCGGTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CCA 90 bp | GCCCCTCACCCCAACCACACTCACCGAGGTTCCTCTGTCCACGCTTaGCACCAGCAGCGGGCACTGTGCCAGGCCAGGACTGGGTACCCG | + |
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Preference number: 5 (lower is better) Translates to: APHPNHTHRGSSVHA*HQQRALCQARTGYP Trigger: CGGGTACCCAGTCCTGGCCTGGCACAGTGCCCGCTGCTGGTGCCAAGCGTGGACAGAGGAACCTCGGTGAGTGTGGTTGGGGTGAGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS GCA 90 bp | CATTGGAGCGAGAACCCATGGGTGCTGCATCCATATGGTCCGGGGTaGTTGAACCGCGCGTCCCAAGCCCCACAGGAATCGCTAGGACTG | + |
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Preference number: 5 (lower is better) Translates to: HWSENPWVLHPYGPG*LNRASQAPQESLGL Trigger: CAGTCCTAGCGATTCCTGTGGGGCTTGGGACGCGCGGTTCAAGCACCCCGGACCATATGGATGCAGCACCCATGGGTTCTCGCTCCAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CCA 90 bp | GGGCATCCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTTGTTaGCGGGTACTCCTAAAAGCAGAATCCGCTCCGCGATCGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GHPVPRYGFLLGPAC*RVLLKAESAPRSAL Trigger: CAGAGCCGATCGCGGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGGATGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368356.9 |
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| CDS CCA 90 bp | CCAGGACCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTTGTTaGCGGGTACTCCTAAAAGCAGAATCCGCTCCGCGATCGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PGPVPRYGFLLGPAC*RVLLKAESAPRSAL Trigger: CAGAGCCGATCGCGGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGGTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000471117.5 ENST00000611010.4 |
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| CDS CCA 90 bp | CCCACAGGAATCGCTAGGACTGAGCAGATAGGCTCGGAGCAACTCTaGACGGGAGAGAAGGGCTCGCAGCAAAGGAGTAAACCGGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: PTGIARTEQIGSEQL*TGEKGSQQRSKPGS Trigger: GGACCCCGGTTTACTCCTTTGCTGCGAGCCCTTCTCTCCCGTCCAGAGTTGCTCCGAGCCTATCTGCTCAGTCCTAGCGATTCCTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CCA 90 bp | CAGGAGGGCAATGCACATCCTGAGCCCTCCCTCGCTGTCCAGACATaGTTCGCGCTGTCCCTCACCTCCCCTCACCTCTTTTCAGTGAAT | + |
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Preference number: 5 (lower is better) Translates to: QEGNAHPEPSLAVQT*FALSLTSPHLFSVN Trigger: ATTCACTGAAAAGAGGTGAGGGGAGGTGAGGGACAGCGCGAACCATGTCTGGACAGCGAGGGAGGGCTCAGGATGTGCATTGCCCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490140.1 |
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| CDS CCA 90 bp | AGGAAAGAAGCATTGGAGCGAGAACCCATGGGTGCTGCATCCATATaGTCCGGGGTGCTTGAACCGCGCGTCCCAAGCCCCACAGGAATC | + |
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Preference number: 5 (lower is better) Translates to: RKEALEREPMGAASI*SGVLEPRVPSPTGI Trigger: GATTCCTGTGGGGCTTGGGACGCGCGGTTCAAGCACCCCGGACCATATGGATGCAGCACCCATGGGTTCTCGCTCCAATGCTTCTTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CCA 90 bp | GCCAGCCAGTCTAGCCCACCGACCTTCAAAACGGACACAACAGGCTaGCCTTCCGATGCCTCACAGTATCGTTACAGAAGTAAGGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: ASQSSPPTFKTDTTG*PSDASQYRYRSKAR Trigger: CCGGGCCTTACTTCTGTAACGATACTGTGAGGCATCGGAAGGCCAGCCTGTTGTGTCCGTTTTGAAGGTCGGTGGGCTAGACTGGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS TCA 90 bp | TCCCTTCCAGGCACGCTGCAATCCTGTACCCTGAAACCAGCTAGATaGGCATGTCCTATAGAGGCCAAGGCTACCATGGGCACCCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SLPGTLQSCTLKPAR*ACPIEAKATMGTLW Trigger: CCAGAGGGTGCCCATGGTAGCCTTGGCCTCTATAGGACATGCTCATCTAGCTGGTTTCAGGGTACAGGATTGCAGCGTGCCTGGAAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000461507.5 ENST00000471117.5 ENST00000489003.5 ENST00000495308.5 |
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| CDS CCA 90 bp | GTTCATTCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTTGTTaGCGGGTACTCCTAAAAGCAGAATCCGCTCCGCGATCGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: VHSVPRYGFLLGPAC*RVLLKAESAPRSAL Trigger: CAGAGCCGATCGCGGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGAATGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461507.5 ENST00000468479.5 ENST00000474345.5 |
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| CDS TCA 90 bp | CTCCTCTGTCACTTTTATAGCCATCCTCTGCTCAGAGGAAAGAGCTaGCACCTCTCTGCCCAGTCTCGAGGCCCCAGTCCACACTGTCTA | + |
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Preference number: 5 (lower is better) Translates to: LLCHFYSHPLLRGKS*HLSAQSRGPSPHCL Trigger: TAGACAGTGTGGACTGGGGCCTCGAGACTGGGCAGAGAGGTGTCAGCTCTTTCCTCTGAGCAGAGGATGGCTATAAAAGTGACAGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CCA 90 bp | CAAAGACGGTCCATGAGCCAGGCTTTCTCCAGATATGCGAAACCCTaGTATCCCAAGCCCAACATCCCATACCAGCTGACAACTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: QRRSMSQAFSRYAKP*YPKPNIPYQLTTGQ Trigger: CTGCCCAGTTGTCAGCTGGTATGGGATGTTGGGCTTGGGATACCAGGGTTTCGCATATCTGGAGAAAGCCTGGCTCATGGACCGTCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000461507.5 ENST00000489003.5 |
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| CDS TCA 90 bp | GATATGCGAAACCCTGGTATCCCAAGCCCAACATCCCATACCAGCTaGCAACTGGGCAGAATCAGAAAGGCAACAGAAGGGGAGAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: DMRNPGIPSPTSHTS*QLGRIRKATEGEKA Trigger: GGCTTTCTCCCCTTCTGTTGCCTTTCTGATTCTGCCCAGTTGTCAGCTGGTATGGGATGTTGGGCTTGGGATACCAGGGTTTCGCATATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461507.5 ENST00000489003.5 |
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| CDS GCA 90 bp | CCACTTACAATAAACAGGCTAGAACTCAGTGCCTTCAAGATGGCGTaGACAAGGCTGGGTAAGGAGGCGGTACAGAGTAAAGTACCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PLTINRLELSAFKMA*TRLGKEAVQSKVPQ Trigger: CTGGGGTACTTTACTCTGTACCGCCTCCTTACCCAGCCTTGTGCACGCCATCTTGAAGGCACTGAGTTCTAGCCTGTTTATTGTAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS TCA 90 bp | CAATCTCAGTCTGATAGGAACTCTAAGCAAGACAAAGACGGTCCATaGGCCAGGCTTTCTCCAGATATGCGAAACCCTGGTATCCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: QSQSDRNSKQDKDGP*ARLSPDMRNPGIPS Trigger: GCTTGGGATACCAGGGTTTCGCATATCTGGAGAAAGCCTGGCTCATGGACCGTCTTTGTCTTGCTTAGAGTTCCTATCAGACTGAGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489003.5 |
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| CDS CAA 90 bp | GGCCCCTCACCCCAACCACACTCACCGAGGTTCCTCTGTCCACGCTaGGCACCAGCAGCGGGCACTGTGCCAGGCCAGGACTGGGTACCC | + |
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Preference number: 6 (lower is better) Translates to: GPSPQPHSPRFLCPR*APAAGTVPGQDWVP Trigger: GGGTACCCAGTCCTGGCCTGGCACAGTGCCCGCTGCTGGTGCCAAGCGTGGACAGAGGAACCTCGGTGAGTGTGGTTGGGGTGAGGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS GCA 72 bp | TCCTCTGTCCACGCTTGGCACCAGCAGCGGGCACTGTaGCAGGCCAGGACTGGGTACCCGTGCACCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSVHAWHQQRAL*QARTGYPCTRE Trigger: CTCCCTGGTGCACGGGTACCCAGTCCTGGCCTGGCACAGTGCCCGCTGCTGGTGCCAAGCGTGGACAGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000356657.10 ENST00000368356.9 ENST00000465559.5 ENST00000487002.1 ENST00000491013.5 |
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| CDS CAA 72 bp | GGAGGAGCAAAGGGCTCGAGGTTCCTCTGTCCACGCTaGGCACCAGCAGCGGGCACTGTGCCAGGCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: GGAKGSRFLCPR*APAAGTVPGQD Trigger: GTCCTGGCCTGGCACAGTGCCCGCTGCTGGTGCCAAGCGTGGACAGAGGAACCTCGAGCCCTTTGCTCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356657.10 ENST00000368356.9 ENST00000465559.5 ENST00000491013.5 |
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| CDS CAA 72 bp | CCCCAACCACACTCACCGAGGTTCCTCTGTCCACGCTaGGCACCAGCAGCGGGCACTGTGCCAGGCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: PQPHSPRFLCPR*APAAGTVPGQD Trigger: GTCCTGGCCTGGCACAGTGCCCGCTGCTGGTGCCAAGCGTGGACAGAGGAACCTCGGTGAGTGTGGTTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CCA 72 bp | GAGGAGCAAAGGGCTCGAGGTTCCTCTGTCCACGCTTaGCACCAGCAGCGGGCACTGTGCCAGGCCAGGACT | + |
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Preference number: 6 (lower is better) Translates to: EEQRARGSSVHA*HQQRALCQART Trigger: AGTCCTGGCCTGGCACAGTGCCCGCTGCTGGTGCCAAGCGTGGACAGAGGAACCTCGAGCCCTTTGCTCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356657.10 ENST00000368356.9 ENST00000465559.5 ENST00000491013.5 |
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| CDS CCA 72 bp | CCCAACCACACTCACCGAGGTTCCTCTGTCCACGCTTaGCACCAGCAGCGGGCACTGTGCCAGGCCAGGACT | + |
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Preference number: 6 (lower is better) Translates to: PNHTHRGSSVHA*HQQRALCQART Trigger: AGTCCTGGCCTGGCACAGTGCCCGCTGCTGGTGCCAAGCGTGGACAGAGGAACCTCGGTGAGTGTGGTTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CAA 90 bp | TGGAGCGAGAACCCATGGGTGCTGCATCCATATGGTCCGGGGTGCTaGAACCGCGCGTCCCAAGCCCCACAGGAATCGCTAGGACTGAGC | + |
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Preference number: 6 (lower is better) Translates to: WSENPWVLHPYGPGC*NRASQAPQESLGLS Trigger: GCTCAGTCCTAGCGATTCCTGTGGGGCTTGGGACGCGCGGTTCAAGCACCCCGGACCATATGGATGCAGCACCCATGGGTTCTCGCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS GCA 72 bp | GAGAACCCATGGGTGCTGCATCCATATGGTCCGGGGTaGTTGAACCGCGCGTCCCAAGCCCCACAGGAATCG | + |
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Preference number: 6 (lower is better) Translates to: ENPWVLHPYGPG*LNRASQAPQES Trigger: CGATTCCTGTGGGGCTTGGGACGCGCGGTTCAAGCACCCCGGACCATATGGATGCAGCACCCATGGGTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CAA 72 bp | AACCCATGGGTGCTGCATCCATATGGTCCGGGGTGCTaGAACCGCGCGTCCCAAGCCCCACAGGAATCGCTA | + |
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Preference number: 6 (lower is better) Translates to: NPWVLHPYGPGC*NRASQAPQESL Trigger: TAGCGATTCCTGTGGGGCTTGGGACGCGCGGTTCAAGCACCCCGGACCATATGGATGCAGCACCCATGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CAA 90 bp | GGGGCATCCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTTGTaGGCGGGTACTCCTAAAAGCAGAATCCGCTCCGCGATCGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GASCSQIRIPARSRL*AGTPKSRIRSAIGS Trigger: AGAGCCGATCGCGGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGGATGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368356.9 |
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| CDS CAA 90 bp | ACAGGGGCATCCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTaGTTGGCGGGTACTCCTAAAAGCAGAATCCGCTCCGCGATCGGC | + |
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Preference number: 6 (lower is better) Translates to: TGASCSQIRIPARSR*LAGTPKSRIRSAIG Trigger: GCCGATCGCGGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGGATGCCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368356.9 |
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| CDS CCA 72 bp | TGTCCTATAGAGGCCAAGGCTACCATGGGCACCCTCTaGGCATCGGGCCCTGTCTGCAATACACCTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CPIEAKATMGTL*ASGPVCNTPAG Trigger: TCCTGCAGGTGTATTGCAGACAGGGCCCGATGCCCAGAGGGTGCCCATGGTAGCCTTGGCCTCTATAGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000461507.5 ENST00000471117.5 ENST00000489003.5 ENST00000495308.5 |
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| CDS CAA 90 bp | TCCAGGACCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTTGTaGGCGGGTACTCCTAAAAGCAGAATCCGCTCCGCGATCGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SRTCSQIRIPARSRL*AGTPKSRIRSAIGS Trigger: AGAGCCGATCGCGGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGGTCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000471117.5 ENST00000611010.4 |
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| CDS CAA 90 bp | TACTCCAGGACCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTaGTTGGCGGGTACTCCTAAAAGCAGAATCCGCTCCGCGATCGGC | + |
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Preference number: 6 (lower is better) Translates to: YSRTCSQIRIPARSR*LAGTPKSRIRSAIG Trigger: GCCGATCGCGGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGGTCCTGGAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000471117.5 ENST00000611010.4 |
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| CDS CAA 90 bp | CTCCGTTCATTCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTaGTTGGCGGGTACTCCTAAAAGCAGAATCCGCTCCGCGATCGGC | + |
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Preference number: 6 (lower is better) Translates to: LRSFCSQIRIPARSR*LAGTPKSRIRSAIG Trigger: GCCGATCGCGGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGAATGAACGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461507.5 ENST00000468479.5 ENST00000474345.5 |
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| CDS GCA 72 bp | CCATCCTCTGCTCAGAGGAAAGAGCTGACACCTCTCTaGCCAGTCTCGAGGCCCCAGTCCACACTGTCTACA | + |
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Preference number: 6 (lower is better) Translates to: PSSAQRKELTPL*PVSRPQSTLST Trigger: TGTAGACAGTGTGGACTGGGGCCTCGAGACTGGGCAGAGAGGTGTCAGCTCTTTCCTCTGAGCAGAGGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CCA 72 bp | GTTCCCAGATACGGATTCCTGCTCGGTCCCGCTTGTTaGCGGGTACTCCTAAAAGCAGAATCCGCTCCGCGA | + |
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Preference number: 6 (lower is better) Translates to: VPRYGFLLGPAC*RVLLKAESAPR Trigger: TCGCGGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000368356.9 ENST00000447866.5 ENST00000461507.5 ENST00000467076.5 ENST00000468479.5 ENST00000471117.5 ENST00000474345.5 ENST00000611010.4 |
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| CDS CAA 72 bp | TGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTTGTaGGCGGGTACTCCTAAAAGCAGAATCCGCTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: CSQIRIPARSRL*AGTPKSRIRSA Trigger: CGCGGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000368356.9 ENST00000447866.5 ENST00000461507.5 ENST00000467076.5 ENST00000468479.5 ENST00000471117.5 ENST00000474345.5 ENST00000495308.5 ENST00000611010.4 |
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| CDS CAA 90 bp | CGTTCATTCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTTGTaGGCGGGTACTCCTAAAAGCAGAATCCGCTCCGCGATCGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RSFCSQIRIPARSRL*AGTPKSRIRSAIGS Trigger: AGAGCCGATCGCGGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGAATGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461507.5 ENST00000468479.5 ENST00000474345.5 |
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| CDS CCA 72 bp | CCCCAAGGAGGAAAGAAGCATTGGAGCGAGAACCCATaGGTGCTGCATCCATATGGTCCGGGGTGCTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: PQGGKKHWSENP*VLHPYGPGCLN Trigger: GTTCAAGCACCCCGGACCATATGGATGCAGCACCCATGGGTTCTCGCTCCAATGCTTCTTTCCTCCTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CAA 72 bp | TCCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTaGTTGGCGGGTACTCCTAAAAGCAGAATCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SCSQIRIPARSR*LAGTPKSRIRS Trigger: GGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368356.9 |
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| CDS CAA 72 bp | CTCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTaGTTGGCGGGTACTCCTAAAAGCAGAATCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LCSQIRIPARSR*LAGTPKSRIRS Trigger: GGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000447866.5 ENST00000495308.5 |
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| CDS CAA 72 bp | ACCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTaGTTGGCGGGTACTCCTAAAAGCAGAATCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: TCSQIRIPARSR*LAGTPKSRIRS Trigger: GGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000471117.5 ENST00000611010.4 |
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| CDS TCA 72 bp | GGCACGCTGCAATCCTGTACCCTGAAACCAGCTAGATaGGCATGTCCTATAGAGGCCAAGGCTACCATGGGC | + |
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Preference number: 6 (lower is better) Translates to: GTLQSCTLKPAR*ACPIEAKATMG Trigger: GCCCATGGTAGCCTTGGCCTCTATAGGACATGCTCATCTAGCTGGTTTCAGGGTACAGGATTGCAGCGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000461507.5 ENST00000471117.5 ENST00000489003.5 ENST00000495308.5 |
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| CDS GCA 72 bp | GCCTTAGCCCAGAGTGCCCCTCCCTCTTGTGGAATGTaGTTGGGGACAATTACAGGAAGGATACGCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: ALAQSAPPSCGM*LGTITGRIRRE Trigger: TTCCCTGCGTATCCTTCCTGTAATTGTCCCCAAGCACATTCCACAAGAGGGAGGGGCACTCTGGGCTAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS GCA 72 bp | TGCCCGGCCTCCTCTGTCACTTTTATAGCCATCCTCTaGTCAGAGGAAAGAGCTGACACCTCTCTGCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: CPASSVTFIAIL*SEERADTSLPS Trigger: ACTGGGCAGAGAGGTGTCAGCTCTTTCCTCTGAGCAGAGGATGGCTATAAAAGTGACAGAGGAGGCCGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CCA 72 bp | ATCGCTAGGACTGAGCAGATAGGCTCGGAGCAACTCTaGACGGGAGAGAAGGGCTCGCAGCAAAGGAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: IARTEQIGSEQL*TGEKGSQQRSK Trigger: TTTACTCCTTTGCTGCGAGCCCTTCTCTCCCGTCCAGAGTTGCTCCGAGCCTATCTGCTCAGTCCTAGCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CAA 72 bp | TTCTGTTCCCAGATACGGATTCCTGCTCGGTCCCGCTaGTTGGCGGGTACTCCTAAAAGCAGAATCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FCSQIRIPARSR*LAGTPKSRIRS Trigger: GGAGCGGATTCTGCTTTTAGGAGTACCCGCCAACAAGCGGGACCGAGCAGGAATCCGTATCTGGGAACAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000461507.5 ENST00000467076.5 ENST00000468479.5 ENST00000474345.5 |
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| CDS CCA 72 bp | GGGACAGGGGCATCCTTCAAAACGGACACAACAGGCTaGCCTTCCGATGCCTCACAGTATCGTTACAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GTGASFKTDTTG*PSDASQYRYRS Trigger: ACTTCTGTAACGATACTGTGAGGCATCGGAAGGCCAGCCTGTTGTGTCCGTTTTGAAGGATGCCCCTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356657.10 |
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| CDS TCA 72 bp | AACCCTGGTATCCCAAGCCCAACATCCCATACCAGCTaGCAACTGGGCAGAATCAGAAAGGCAACAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: NPGIPSPTSHTS*QLGRIRKATEG Trigger: CCCTTCTGTTGCCTTTCTGATTCTGCCCAGTTGTCAGCTGGTATGGGATGTTGGGCTTGGGATACCAGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000461507.5 ENST00000489003.5 |
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| CDS GCA 72 bp | GGGCGGAAATATATAATTAGACTACAACTCCCAATGTaGCCGCGGGAGGGACAGATAACGCGATCCTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GRKYIIRLQLPM*PREGQITRSCV Trigger: CACGCAGGATCGCGTTATCTGTCCCTCCCGCGGGCACATTGGGAGTTGTAGTCTAATTATATATTTCCGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468479.5 ENST00000611010.4 |
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| CDS CCA 72 bp | TCCATGAGCCAGGCTTTCTCCAGATATGCGAAACCCTaGTATCCCAAGCCCAACATCCCATACCAGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: SMSQAFSRYAKP*YPKPNIPYQLT Trigger: TGTCAGCTGGTATGGGATGTTGGGCTTGGGATACCAGGGTTTCGCATATCTGGAGAAAGCCTGGCTCATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000461507.5 ENST00000489003.5 |
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| CDS CCA 72 bp | TCTAGCCCACCGACCTTCAAAACGGACACAACAGGCTaGCCTTCCGATGCCTCACAGTATCGTTACAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SSPPTFKTDTTG*PSDASQYRYRS Trigger: ACTTCTGTAACGATACTGTGAGGCATCGGAAGGCCAGCCTGTTGTGTCCGTTTTGAAGGTCGGTGGGCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CAA 72 bp | TTAGCCCAGAGTGCCCCTCCCTCTTGTGGAATGTGCTaGGGGACAATTACAGGAAGGATACGCAGGGAACAA | + |
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Preference number: 6 (lower is better) Translates to: LAQSAPPSCGMC*GTITGRIRREQ Trigger: TTGTTCCCTGCGTATCCTTCCTGTAATTGTCCCCAAGCACATTCCACAAGAGGGAGGGGCACTCTGGGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CCA 72 bp | GCACTAAGCACTCCCTTCAAAACGGACACAACAGGCTaGCCTTCCGATGCCTCACAGTATCGTTACAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: ALSTPFKTDTTG*PSDASQYRYRS Trigger: ACTTCTGTAACGATACTGTGAGGCATCGGAAGGCCAGCCTGTTGTGTCCGTTTTGAAGGGAGTGCTTAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465559.5 |
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| CDS GCA 72 bp | ATAAACAGGCTAGAACTCAGTGCCTTCAAGATGGCGTaGACAAGGCTGGGTAAGGAGGCGGTACAGAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: INRLELSAFKMA*TRLGKEAVQSK Trigger: TTTACTCTGTACCGCCTCCTTACCCAGCCTTGTGCACGCCATCTTGAAGGCACTGAGTTCTAGCCTGTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487002.1 |
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| CDS CCA 72 bp | GGTCTCCGTTCATTCTTCAAAACGGACACAACAGGCTaGCCTTCCGATGCCTCACAGTATCGTTACAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GLRSFFKTDTTG*PSDASQYRYRS Trigger: ACTTCTGTAACGATACTGTGAGGCATCGGAAGGCCAGCCTGTTGTGTCCGTTTTGAAGAATGAACGGAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000470171.5 ENST00000477057.5 ENST00000489003.5 ENST00000612683.1 |
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| CDS CAA 90 bp | TTTATCACCCTTTCTTCCAATTACACAGGACAGAGAAGCCCTTTCTaGCCACTACCACAACCCCACTTCCCAACACCCTTCCTCGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: FITLSSNYTGQRSPF*PLPQPHFPTPFLAF Trigger: GAAAGCGAGGAAGGGTGTTGGGAAGTGGGGTTGTGGTAGTGGCAAGAAAGGGCTTCTCTGTCCTGTGTAATTGGAAGAAAGGGTGATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461507.5 ENST00000489003.5 ENST00000495308.5 |
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| CDS TCA 72 bp | TCTGATAGGAACTCTAAGCAAGACAAAGACGGTCCATaGGCCAGGCTTTCTCCAGATATGCGAAACCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SDRNSKQDKDGP*ARLSPDMRNPG Trigger: ACCAGGGTTTCGCATATCTGGAGAAAGCCTGGCTCATGGACCGTCTTTGTCTTGCTTAGAGTTCCTATCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489003.5 |
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