RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FCRL5 (Homo sapiens)

Ensembl gene IDs: ENSG00000143297

Ensembl transcript IDs: ENST00000361835.8, ENST00000368189.3, ENST00000368190.7, ENST00000461387.5, ENST00000462218.1, ENST00000481082.1, ENST00000483875.1, ENST00000497286.5

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGTTaGGCCCTGGGCAGCCAGAGCCACACATTCCCTCTCCATGGGCCT +
Preference number: 1 (lower is better)
Translates to: GQRLAREQHDPCEPS*ALGSQSHTFPLHGP
Trigger: AGGCCCATGGAGAGGGAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 90 bp GTGGTGCTGTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTaGACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCCCTCT +
Preference number: 1 (lower is better)
Translates to: VVLWPKAGQGAARSV*TELGPGQPEPHIPS
Trigger: AGAGGGAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 90 bp GCATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTaGGCTGTTAGGCCAGCCCGGCATCTCCTGAAGGCCCACTCTCCC +
Preference number: 1 (lower is better)
Translates to: ASTQSRNSVSEFRST*AVRPARHLLKAHSP
Trigger: GGGAGAGTGGGCCTTCAGGAGATGCCGGGCTGGCCTAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 90 bp ACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCCCTCTCCATaGGCCTCTGCTGAGACCTATAGGGCTTCACATGCATGCAGTGCA +
Preference number: 1 (lower is better)
Translates to: TELGPGQPEPHIPSP*ASAETYRASHACSA
Trigger: TGCACTGCATGCATGTGAAGCCCTATAGGTCTCAGCAGAGGCCCATGGAGAGGGAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 90 bp GGATCCGAGACTTTCACAGGGAGGTTCTGCAGGCAGGAAGTGTGCTaGGATGCCACACAAGCAAACAGCCCTGAGGAGCTCTGTGGCTCC +
Preference number: 1 (lower is better)
Translates to: GSETFTGRFCRQEVC*DATQANSPEELCGS
Trigger: GGAGCCACAGAGCTCCTCAGGGCTGTTTGCTTGTGTGGCATCCCAGCACACTTCCTGCCTGCAGAACCTCCCTGTGAAAGTCTCGGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR TCA 90 bp CTGCAGGCAGGAAGTGTGCTGGGATGCCACACAAGCAAACAGCCCTaGGGAGCTCTGTGGCTCCATTTTCAGCTGCAGGGAGAACAGGCA +
Preference number: 1 (lower is better)
Translates to: LQAGSVLGCHTSKQP*GALWLHFQLQGEQA
Trigger: TGCCTGTTCTCCCTGCAGCTGAAAATGGAGCCACAGAGCTCCTCAGGGCTGTTTGCTTGTGTGGCATCCCAGCACACTTCCTGCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR CCA 90 bp ACATGCATGCAGTGCAGTCCCAGGGCCAGCAGCATCAGCATCCCCTaGGAACATGTTAGAATGGCAGTCTCAGGCTCTACGCAGACCCAC +
Preference number: 1 (lower is better)
Translates to: TCMQCSPRASSISIP*EHVRMAVSGSTQTH
Trigger: GTGGGTCTGCGTAGAGCCTGAGACTGCCATTCTAACATGTTCCCAGGGGATGCTGATGCTGCTGGCCCTGGGACTGCACTGCATGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 90 bp AAAGCCAACATGTCACAGAGAAGAAGCTCTCTCAGCAACAGCAGCTaGTGGTGCTGTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCG +
Preference number: 1 (lower is better)
Translates to: KANMSQRRSSLSNSS*WCCGQRLAREQHDP
Trigger: CGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGCACCACCAGCTGCTGTTGCTGAGAGAGCTTCTTCTCTGTGACATGTTGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 90 bp TGGTGTCAAGTGCCGACCTTAGAGTTTGAGACAGGTGGAGGAGTGTaGAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGC +
Preference number: 1 (lower is better)
Translates to: WCQVPTLEFETGGGV*NAAPVGRPITCPMC
Trigger: GCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTTCACACTCCTCCACCTGTCTCAAACTCTAAGGTCGGCACTTGACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR GCA 90 bp AAAGGATCCGAGACTTTCACAGGGAGGTTCTGCAGGCAGGAAGTGTaGTGGGATGCCACACAAGCAAACAGCCCTGAGGAGCTCTGTGGC +
Preference number: 1 (lower is better)
Translates to: KGSETFTGRFCRQEV*WDATQANSPEELCG
Trigger: GCCACAGAGCTCCTCAGGGCTGTTTGCTTGTGTGGCATCCCAGCACACTTCCTGCCTGCAGAACCTCCCTGTGAAAGTCTCGGATCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR TCA 90 bp AGCAGGAGAGAAGTTACCTTGGTGTCAAGTGCCGACCTTAGAGTTTaGGACAGGTGGAGGAGTGTGAAATGCAGCCCCCGTGGGGAGACC +
Preference number: 1 (lower is better)
Translates to: SRREVTLVSSADLRV*DRWRSVKCSPRGET
Trigger: GGTCTCCCCACGGGGGCTGCATTTCACACTCCTCCACCTGTCTCAAACTCTAAGGTCGGCACTTGACACCAAGGTAACTTCTCTCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR GCA 90 bp TGTCCCATGTGCACAGGCTGTGTGCTGTCCCATTTGGCAGCACACTaGAGTAGCCCCACCAGGCTGATGACAATTGAGAAATGCATCCAC +
Preference number: 1 (lower is better)
Translates to: CPMCTGCVLSHLAAH*SSPTRLMTIEKCIH
Trigger: GTGGATGCATTTCTCAATTGTCATCAGCCTGGTGGGGCTACTGCAGTGTGCTGCCAAATGGGACAGCACACAGCCTGTGCACATGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR GCA 90 bp CTGGAACCATACCACAAAGGATCCGAGACTTTCACAGGGAGGTTCTaGAGGCAGGAAGTGTGCTGGGATGCCACACAAGCAAACAGCCCT +
Preference number: 1 (lower is better)
Translates to: LEPYHKGSETFTGRF*RQEVCWDATQANSP
Trigger: AGGGCTGTTTGCTTGTGTGGCATCCCAGCACACTTCCTGCCTGCAGAACCTCCCTGTGAAAGTCTCGGATCCTTTGTGGTATGGTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR GCA 90 bp CCAGTATGTGTTCTGTCTGCACCCCTGGTCCTCCTGGCCTTGACTTaGTGGGTTACTTCTGTTAGGATGGGAAGAACTTGGGACTTGGTG +
Preference number: 1 (lower is better)
Translates to: PVCVLSAPLVLLALT*WVTSVRMGRTWDLV
Trigger: CACCAAGTCCCAAGTTCTTCCCATCCTAACAGAAGTAACCCAGCAAGTCAAGGCCAGGAGGACCAGGGGTGCAGACAGAACACATACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR GCA 90 bp AGTCAGGGCTTTAACTGGGAAACAGGTGACAGTCCAGCAGGGCCCTaGATTCTGGTCAGACTGAGAATGAGGACATGTGAAACAAAGGCC +
Preference number: 1 (lower is better)
Translates to: SQGFNWETGDSPAGP*ILVRLRMRTCETKA
Trigger: GGCCTTTGTTTCACATGTCCTCATTCTCAGTCTGACCAGAATGCAGGGCCCTGCTGGACTGTCACCTGTTTCCCAGTTAAAGCCCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 90 bp GGTGGGGAAACAAAGATAGTGGCAGCTACTTTCCGCTTCCCAGGGTaGCTGATGAAAGCCAACATGTCACAGAGAAGAAGCTCTCTCAGC +
Preference number: 1 (lower is better)
Translates to: GGETKIVAATFRFPG*LMKANMSQRRSSLS
Trigger: GCTGAGAGAGCTTCTTCTCTGTGACATGTTGGCTTTCATCAGCCACCCTGGGAAGCGGAAAGTAGCTGCCACTATCTTTGTTTCCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 90 bp GTATGTGTTCTGTCTGCACCCCTGGTCCTCCTGGCCTTGACTTGCTaGGTTACTTCTGTTAGGATGGGAAGAACTTGGGACTTGGTGTAT +
Preference number: 1 (lower is better)
Translates to: VCVLSAPLVLLALTC*VTSVRMGRTWDLVY
Trigger: ATACACCAAGTCCCAAGTTCTTCCCATCCTAACAGAAGTAACCCAGCAAGTCAAGGCCAGGAGGACCAGGGGTGCAGACAGAACACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR GCA 90 bp CAAATAGTAATTGAGCACCTCCTGTGTTCCAGTATGTGTTCTGTCTaGACCCCTGGTCCTCCTGGCCTTGACTTGCTGGGTTACTTCTGT +
Preference number: 1 (lower is better)
Translates to: QIVIEHLLCSSMCSV*TPGPPGLDLLGYFC
Trigger: ACAGAAGTAACCCAGCAAGTCAAGGCCAGGAGGACCAGGGGTGCAGACAGAACACATACTGGAACACAGGAGGTGCTCAATTACTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 90 bp TTGGTGTATGAAAGCCACTTACTTGGGCAGGTAGACACTGACACATaGGCAGGAGAGAAGTTACCTTGGTGTCAAGTGCCGACCTTAGAG +
Preference number: 1 (lower is better)
Translates to: LVYESHLLGQVDTDT*AGEKLPWCQVPTLE
Trigger: CTCTAAGGTCGGCACTTGACACCAAGGTAACTTCTCTCCTGCTCATGTGTCAGTGTCTACCTGCCCAAGTAAGTGGCTTTCATACACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 90 bp GAGAGGGCTCAGGTTATATACATTCACCCTTTTCATGGGAAAGTGTaGGGCCTGAGGTGGGGAAACAAAGATAGTGGCAGCTACTTTCCG +
Preference number: 1 (lower is better)
Translates to: ERAQVIYIHPFHGKV*GLRWGNKDSGSYFP
Trigger: CGGAAAGTAGCTGCCACTATCTTTGTTTCCCCACCTCAGGCCTCACACTTTCCCATGAAAAGGGTGAATGTATATAACCTGAGCCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 90 bp CCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTTCAGTTTGCGTCTaGAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGAGTTCCCC +
Preference number: 1 (lower is better)
Translates to: PASSRPKKSHFSVCV*KQKNLCPSPKQEFP
Trigger: GGGGAACTCCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAATGGCTCTTCTTGGGTCTTGAGCTTGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 90 bp CTCAGGTTATATACATTCACCCTTTTCATGGGAAAGTGTGAGGCCTaGGGTGGGGAAACAAAGATAGTGGCAGCTACTTTCCGCTTCCCA +
Preference number: 1 (lower is better)
Translates to: LRLYTFTLFMGKCEA*GGETKIVAATFRFP
Trigger: TGGGAAGCGGAAAGTAGCTGCCACTATCTTTGTTTCCCCACCTCAGGCCTCACACTTTCCCATGAAAAGGGTGAATGTATATAACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 90 bp GGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTaGGGCTTAAAAGTCATCACTGTACAATCCACTGGGAGCAAAGAT +
Preference number: 1 (lower is better)
Translates to: GVSFQCPWKDFISGP*GLKVITVQSTGSKD
Trigger: ATCTTTGCTCCCAGTGGATTGTACAGTGATGACTTTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 90 bp TGGGAACATGTTAGAATGGCAGTCTCAGGCTCTACGCAGACCCACTaGATCAGTATCTGTATTTTCACAGGATCCTCAGGTGATCCACAA +
Preference number: 1 (lower is better)
Translates to: WEHVRMAVSGSTQTH*ISICIFTGSSGDPQ
Trigger: TTGTGGATCACCTGAGGATCCTGTGAAAATACAGATACTGATTCAGTGGGTCTGCGTAGAGCCTGAGACTGCCATTCTAACATGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 90 bp AAGCGGAACAGAACATCCCATTGCTCAGAGATGGGAGAACAACTCTaGATGGAGAGGGCTCAGGTTATATACATTCACCCTTTTCATGGG +
Preference number: 1 (lower is better)
Translates to: KRNRTSHCSEMGEQL*MERAQVIYIHPFHG
Trigger: CCCATGAAAAGGGTGAATGTATATAACCTGAGCCCTCTCCATTCAGAGTTGTTCTCCCATCTCTGAGCAATGGGATGTTCTGTTCCGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 90 bp TGCTTTGATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTaGAACCATACCACAAAGGATCCGAGACTTTCACAGGGAGGTTCT +
Preference number: 1 (lower is better)
Translates to: CFDHLQEDCWETSDS*NHTTKDPRLSQGGS
Trigger: AGAACCTCCCTGTGAAAGTCTCGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATCAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR GCA 90 bp TTGTTTCTTAGGGAAGCCAGAATACCTCCCGGATTTCCTAGGGAGTaGACTGGATTTTATGCCAGTTTGATTACCCACAGTTTTCTTCCT +
Preference number: 1 (lower is better)
Translates to: LFLREARIPPGFPRE*TGFYASLITHSFLP
Trigger: AGGAAGAAAACTGTGGGTAATCAAACTGGCATAAAATCCAGTGCACTCCCTAGGAAATCCGGGAGGTATTCTGGCTTCCCTAAGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 90 bp GTGACTGTAGAGGCTGACATATCTCAAGATCTGCAGTCAGCAAGCTaGAGATCCAGGAGATCCAATAGCATAGTTTCTTTCAGTCCATAT +
Preference number: 1 (lower is better)
Translates to: VTVEADISQDLQSAS*RSRRSNSIVSFSPY
Trigger: ATATGGACTGAAAGAAACTATGCTATTGGATCTCCTGGATCTCCAGCTTGCTGACTGCAGATCTTGAGATATGTCAGCCTCTACAGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 90 bp CACAGGGATGTTGTGAAGACCAAGATGGATGCAGTTCTGTTCTCATaGAGCTTACATTCTACTGGCATTAAGGGTGACAGTCAAGAAACA +
Preference number: 1 (lower is better)
Translates to: HRDVVKTKMDAVLFS*SLHSTGIKGDSQET
Trigger: TGTTTCTTGACTGTCACCCTTAATGCCAGTAGAATGTAAGCTTCATGAGAACAGAACTGCATCCATCTTGGTCTTCACAACATCCCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR CCA 90 bp GATGGATATCATAAAAGCGGAACAGAACATCCCATTGCTCAGAGATaGGAGAACAACTCTGAATGGAGAGGGCTCAGGTTATATACATTC +
Preference number: 1 (lower is better)
Translates to: DGYHKSGTEHPIAQR*ENNSEWRGLRLYTF
Trigger: GAATGTATATAACCTGAGCCCTCTCCATTCAGAGTTGTTCTCCCATCTCTGAGCAATGGGATGTTCTGTTCCGCTTTTATGATATCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 90 bp GATATAAAATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTaGACCTCCTCTCTCTTTGGTATTGAGTGCACTGCAAAGTCTAAG +
Preference number: 1 (lower is better)
Translates to: DIKFSVIILPSQVQV*TSSLFGIECTAKSK
Trigger: CTTAGACTTTGCAGTGCACTCAATACCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATTTTATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR CCA 90 bp TTTGCATTTTTAGTGAGGTGCTTTGATCATCTTCAAGAAGACTGCTaGGAAACATCAGATTCCTGGAACCATACCACAAAGGATCCGAGA +
Preference number: 1 (lower is better)
Translates to: FAFLVRCFDHLQEDC*ETSDSWNHTTKDPR
Trigger: TCTCGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATCAAAGCACCTCACTAAAAATGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR TCA 90 bp ATGCAGCCAGGGTTGAGAGCCAGTCATAATGCGGTTTCCTCATTATaGGTCCTTTATATTCATTTACATCTTGTTGGGCTAGATTTTGTC +
Preference number: 1 (lower is better)
Translates to: MQPGLRASHNAVSSL*VLYIHLHLVGLDFV
Trigger: GACAAAATCTAGCCCAACAAGATGTAAATGAATATAAAGGACTCATAATGAGGAAACCGCATTATGACTGGCTCTCAACCCTGGCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR GCA 90 bp TTATTTGCATTTTTAGTGAGGTGCTTTGATCATCTTCAAGAAGACTaGTGGGAAACATCAGATTCCTGGAACCATACCACAAAGGATCCG +
Preference number: 1 (lower is better)
Translates to: LFAFLVRCFDHLQED*WETSDSWNHTTKDP
Trigger: CGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATCAAAGCACCTCACTAAAAATGCAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR-3UTR GCA 90 bp GTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGTTGGGCCCCATTTGGCAGCACACTaGAGTAGCCCCACCAGGCTG +
Preference number: 2 (lower is better)
Translates to: VAKGWPGSSTIRVNRVGPHLAAH*SSPTRL
Trigger: CAGCCTGGTGGGGCTACTGCAGTGTGCTGCCAAATG...GGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR GCA 90 bp GTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGTTGGGCCCTGTGCACAGGCTGTGTaGTGTCCCATTTGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: VAKGWPGSSTIRVNRVGPCAQAV*CPIWQH
Trigger: GTGCTGCCAAATGGGACAGCACACAGCCTGTGCACA...GGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR GCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCAGGGCTTCACATGCATaGAGTGCAGTCCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFRASHA*SAVPGP
Trigger: TGGCCCTGGGACTGCACTGCATGCATGTGAAGCCCT...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR TCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCTTGGGGTGCAGAGGCTaGAACAGCAGTTGGAGAGAC +
Preference number: 2 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFLGCRG*NSSWRD
Trigger: GTCTCTCCAACTGCTGTTTCAGCCTCTGCACCCCAA...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR TCA 90 bp ATGTGCACAGGCTGTGTGCTGTCCCATTTGGCAGCACACTGCAGTAGCCCCACCGAGTTTAGGAGCACCTaGGCTGTTAGGCCAGCCCGG +
Preference number: 2 (lower is better)
Translates to: MCTGCVLSHLAAHCSSPTEFRST*AVRPAR
Trigger: CCGGGCTGGCCTAACAGCTCAGGTGCTCCTAAACTC...GGTGGGGCTACTGCAGTGTGCTGCCAAATGGGACAGCACACAGCCTGTGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp GTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGTTGGGCCCGGGAACATGTTAGAATaGCAGTCTCAGGCTCTACGC +
Preference number: 2 (lower is better)
Translates to: VAKGWPGSSTIRVNRVGPGNMLE*QSQALR
Trigger: GCGTAGAGCCTGAGACTGCCATTCTAACATGTTCCC...GGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR GCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCATCTTCCCACTTCAATaGTGCTTCTCCCCCAAGGGG +
Preference number: 2 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFIFPLQ*CFSPKG
Trigger: CCCCTTGGGGGAGAAGCAGCATTGAAGTGGGAAGAT...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR GCA 90 bp GAGGAGTGTGAAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCAAGTCCAGCAGGGCCCTaGATTCTGGTCAGACTGAGA +
Preference number: 2 (lower is better)
Translates to: EECEMQPPWGDPSHVPCASPAGP*ILVRLR
Trigger: TCTCAGTCTGACCAGAATGCAGGGCCCTGCTGGACT...TGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTTCACACTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp ATGTGCACAGGCTGTGTGCTGTCCCATTTGGCAGCACACTGCAGTAGCCCCACCGTAAGACCCCCTCTGTaGGGGTGTGATGAGAGCAGT +
Preference number: 2 (lower is better)
Translates to: MCTGCVLSHLAAHCSSPTVRPPL*GCDESS
Trigger: ACTGCTCTCATCACACCCCCACAGAGGGGGTCTTAC...GGTGGGGCTACTGCAGTGTGCTGCCAAATGGGACAGCACACAGCCTGTGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR TCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCTTGGGACTTGGTGTATaGAAGCCACTTACTTGGGCA +
Preference number: 2 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFLGLGV*KPLTWA
Trigger: TGCCCAAGTAAGTGGCTTTCATACACCAAGTCCCAA...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR TCA 90 bp ACTTGGAAGCATGAAAAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGCAGCACGATCCGTGTaGACCGAGTTGGGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: TWKHEKPWFRWSELPMPLAARSV*TELGPG
Trigger: CCCAGGGCCCAACTCGGTTCACACGGATCGTGCTGC...CAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTTTTCATGCTTCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp ACAGACTGGACGGGGTCCACCCACATTAGGGTGGAGTTTGTTCTGCCACTGTGCCCCCAAGGGGAACTTTaGGGTGCAGAGGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: TDWTGSTHIRVEFVLPLCPQGEL*GAEAET
Trigger: TGTTTCAGCCTCTGCACCCCAAAGTTCCCCTTGGGG...GCACAGTGGCAGAACAAACTCCACCCTAATGTGGGTGGACCCCGTCCAGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp TGGTGGTGCTGTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGGATGGGAAGAACTTaGGACTTGGTGTATGAAAGC +
Preference number: 2 (lower is better)
Translates to: WWCCGQRLAREQHDPCEPRMGRT*DLVYES
Trigger: GCTTTCATACACCAAGTCCCAAGTTCTTCCCATCCT...CGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGCACCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CAA 90 bp AGACCCATCACATGTCCCATGTGCACAGGCTGTGTGCTGTCCCATTaGGCAGCACACTGCAGTAGCCCCACCAGGCTGATGACAATTGAG +
Preference number: 2 (lower is better)
Translates to: RPITCPMCTGCVLSH*AAHCSSPTRLMTIE
Trigger: CTCAATTGTCATCAGCCTGGTGGGGCTACTGCAGTGTGCTGCCAAATGGGACAGCACACAGCCTGTGCACATGGGACATGTGATGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR TCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCCAGTCAAATAGTAATTaGGCACCTCCTGTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFQSNSN*APPVFQ
Trigger: CTGGAACACAGGAGGTGCTCAATTACTATTTGACTG...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp TGGTGGTGCTGTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGGAAGAACTTGGGACTTaGTGTATGAAAGCCACTTAC +
Preference number: 2 (lower is better)
Translates to: WWCCGQRLAREQHDPCEPEELGT*CMKATY
Trigger: GTAAGTGGCTTTCATACACCAAGTCCCAAGTTCTTC...CGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGCACCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR TCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCTCTACGCAGACCCACTaGATCAGTATCTGTATTTTC +
Preference number: 2 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFSTQTH*ISICIF
Trigger: GAAAATACAGATACTGATTCAGTGGGTCTGCGTAGA...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp ACTTGGAAGCATGAAAAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAAATGCAGCCCCCGTaGGGAGACCCATCACATGTC +
Preference number: 2 (lower is better)
Translates to: TWKHEKPWFRWSELPMPLEMQPP*GDPSHV
Trigger: GACATGTGATGGGTCTCCCCACGGGGGCTGCATTTC...CAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTTTTCATGCTTCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp AAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAACCGAGTTGGGCCCTaGGCAGCCAGAGCCACACAT +
Preference number: 2 (lower is better)
Translates to: KPWFRWSELPMPLEGFYFNRVGP*AARATH
Trigger: ATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTT...GAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR TCA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAACAGCAACCACAGCTaGAGCCCACTAAGGAATCCA +
Preference number: 2 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLNSNHS*SPLRNP
Trigger: TGGATTCCTTAGTGGGCTTCAGCTGTGGTTGCTGTT...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR TCA 90 bp GGGAAACATCAGATTCCTGGAACCATACCACAAAGGATCCGAGACTTTCACAGGACAAGCAAACAGCCCTaGGGAGCTCTGTGGCTCCAT +
Preference number: 2 (lower is better)
Translates to: GKHQIPGTIPQRIRDFHRTSKQP*GALWLH
Trigger: ATGGAGCCACAGAGCTCCTCAGGGCTGTTTGCTTGT...CCTGTGAAAGTCTCGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR-3UTR GCA 90 bp GACTGCTGGGAAACATCAGATTCCTGGAACCATACCACAAAGGATCCGAGACTTTGCAGGCAGGAAGTGTaGTGGGATGCCACACAAGCA +
Preference number: 2 (lower is better)
Translates to: DCWETSDSWNHTTKDPRLCRQEV*WDATQA
Trigger: TGCTTGTGTGGCATCCCAGCACACTTCCTGCCTGCA...AAGTCTCGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR-3UTR CCA 90 bp GGAACAGAACATCCCATTGCTCAGAGATGGGAGAACAACTCTGAATGGAGAGGGTTCCGCTTCCCAGGGTaGCTGATGAAAGCCAACATG +
Preference number: 2 (lower is better)
Translates to: GTEHPIAQRWENNSEWRGFRFPG*LMKANM
Trigger: CATGTTGGCTTTCATCAGCCACCCTGGGAAGCGGAA...CCCTCTCCATTCAGAGTTGTTCTCCCATCTCTGAGCAATGGGATGTTCTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR GCA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGGGAATCCAGGAGATGTaGTGGGCCCTGGAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: IFQFASESRKTYVPAQSRGIQEM*WALEWE
Trigger: CTCCCACTCCAGGGCCCAGCACATCTCCTGGATTCC...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR GCA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGTGGAGGAGTGTGAAATaGAGCCCCCGTGGGGAGACC +
Preference number: 2 (lower is better)
Translates to: IFQFASESRKTYVPAQSRWRSVK*SPRGET
Trigger: GGTCTCCCCACGGGGGCTGCATTTCACACTCCTCCA...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR GCA 90 bp AAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGTATGTGTTCTGTCTaGACCCCTGGTCCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: KPWFRWSELPMPLEGFYFSMCSV*TPGPPG
Trigger: GCCAGGAGGACCAGGGGTGCAGACAGAACACATACT...GAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR GCA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGTCCAGCCTTGTCCTCTaGAAGGCTGCACTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: IFQFASESRKTYVPAQSRSSLVL*KAALGC
Trigger: GCAGCCCAGTGCAGCCTTGCAGAGGACAAGGCTGGA...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGATCCAGGAGATGTGCTaGGCCCTGGAGTGGGAGCAC +
Preference number: 2 (lower is better)
Translates to: IFQFASESRKTYVPAQSRIQEMC*ALEWEH
Trigger: GTGCTCCCACTCCAGGGCCCAGCACATCTCCTGGAT...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTCTGGCCTTGACTTGCTaGGTTACTTCTGTTAGGATG +
Preference number: 2 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLLALTC*VTSVRM
Trigger: CATCCTAACAGAAGTAACCCAGCAAGTCAAGGCCAG...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp AGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAAACCAGTAGATATGGTCTaGGGCAGCCTAAATCTTCCC +
Preference number: 2 (lower is better)
Translates to: SELPMPLEGFYFRAVGLKPVDMV*GSLNLP
Trigger: GGGAAGATTTAGGCTGCCCCAGACCATATCTACTGG...TTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR TCA 90 bp AAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCATGGGAGAACAACTCTaGATGGAGAGGGCTCAGGTT +
Preference number: 2 (lower is better)
Translates to: KPWFRWSELPMPLEGFYFMGEQL*MERAQV
Trigger: AACCTGAGCCCTCTCCATTCAGAGTTGTTCTCCCAT...GAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR GCA 90 bp GTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTTCTTCCCACTTCAATGCTaGTTCTCCCCCAAGGGGAAC +
Preference number: 2 (lower is better)
Translates to: VSFSPYASKLKTQEEPFFFPLQC*FSPKGN
Trigger: GTTCCCCTTGGGGGAGAAGCAGCATTGAAGTGGGAA...GAAAAATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp ATAAGATGTGATGGATATCATAAAAGCGGAACAGAACATCCCATTGCTCAGAGAAGATGTGCTGGGCCCTaGAGTGGGAGCACCTTGCCA +
Preference number: 2 (lower is better)
Translates to: IRCDGYHKSGTEHPIAQRRCAGP*SGSTLP
Trigger: TGGCAAGGTGCTCCCACTCCAGGGCCCAGCACATCT...TCTCTGAGCAATGGGATGTTCTGTTCCGCTTTTATGATATCCATCACATCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTGAGAACAACTCTGAATaGAGAGGGCTCAGGTTATAT +
Preference number: 2 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLENNSE*RGLRLY
Trigger: ATATAACCTGAGCCCTCTCCATTCAGAGTTGTTCTC...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp GATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTGGAACCATACCACAAGGCAGGAAGTGTGCTaGGATGCCACACAAGCAAAC +
Preference number: 2 (lower is better)
Translates to: DHLQEDCWETSDSWNHTTRQEVC*DATQAN
Trigger: GTTTGCTTGTGTGGCATCCCAGCACACTTCCTGCCT...TGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR-3UTR TCA 90 bp AGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAAACAGGCTGATGACAATTaGGAAATGCATCCACCCAAA +
Preference number: 2 (lower is better)
Translates to: SELPMPLEGFYFRAVGLKQADDN*EMHPPK
Trigger: TTTGGGTGGATGCATTTCTCAATTGTCATCAGCCTG...TTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR GCA 90 bp GTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTTCCTCCTGGCCTTGACTTaGTGGGTTACTTCTGTTAGG +
Preference number: 2 (lower is better)
Translates to: VSFSPYASKLKTQEEPFFLLALT*WVTSVR
Trigger: CCTAACAGAAGTAACCCAGCAAGTCAAGGCCAGGAG...GAAAAATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR TCA 90 bp ATAAGATGTGATGGATATCATAAAAGCGGAACAGAACATCCCATTGCTCAGAGATGGGCAGGTAGACACTaGCACATGAGCAGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: IRCDGYHKSGTEHPIAQRWAGRH*HMSRRE
Trigger: TTCTCTCCTGCTCATGTGTCAGTGTCTACCTGCCCA...TCTCTGAGCAATGGGATGTTCTGTTCCGCTTTTATGATATCCATCACATCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR GCA 90 bp CATAGTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTGGATTTCCTAGGGAGTaGACTGGATTTTATGCCAGT +
Preference number: 2 (lower is better)
Translates to: HSFFQSICQQAQDPRRAIGFPRE*TGFYAS
Trigger: ACTGGCATAAAATCCAGTGCACTCCCTAGGAAATCC...AATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR GCA 90 bp GTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTTCAACAGAACATCCCATTaGTCAGAGATGGGAGAACAA +
Preference number: 2 (lower is better)
Translates to: VSFSPYASKLKTQEEPFFNRTSH*SEMGEQ
Trigger: TTGTTCTCCCATCTCTGAGCAATGGGATGTTCTGTT...GAAAAATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CCA 90 bp CATAGTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTACTTCTGTTAGGATaGGAAGAACTTGGGACTTGG +
Preference number: 2 (lower is better)
Translates to: HSFFQSICQQAQDPRRAILLLLG*EELGTW
Trigger: CCAAGTCCCAAGTTCTTCCCATCCTAACAGAAGTAA...AATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR TCA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTACCATTTGGCTTCTCTaGAAAGAAAGTAAACTTTCC +
Preference number: 2 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSTIWLL*KESKLS
Trigger: GGAAAGTTTACTTTCTTTTCAGAGAAGCCAAATGGT...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR-3UTR TCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATGCATTCTCAGTTTCCTaGATCCCTGTATTTTTGACA +
Preference number: 2 (lower is better)
Translates to: FTKVFDESNMQPGLRASHAFSVS*IPVFLT
Trigger: TGTCAAAAATACAGGGATTCAGGAAACTGAGAATGC...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR-3UTR CCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATAAATTGGCGTACTGTTaGAACATACAAGGAATGAGG +
Preference number: 2 (lower is better)
Translates to: FTKVFDESNMQPGLRASHKLAYC*NIQGMR
Trigger: CCTCATTCCTTGTATGTTCCAACAGTACGCCAATTT...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR-3UTR TCA 90 bp CATAGTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTGATTTTATGCCAGTTTaGTTACCCACAGTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: HSFFQSICQQAQDPRRAIDFMPV*LPTVFF
Trigger: GAAGAAAACTGTGGGTAATCAAACTGGCATAAAATC...AATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR TCA 90 bp AGAAGAATCCGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACATATGTTTAGTGAGGTGCTTTaGTCATCTTCAAGAAGACTG +
Preference number: 2 (lower is better)
Translates to: RRIRTRNSLILSTAEKHMFSEVL*SSSRRL
Trigger: CAGTCTTCTTGAAGATGATCAAAGCACCTCACTAAA...CATATGTTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCGGATTCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR-3UTR GCA 90 bp AGAATCCGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACATATGCTCGCATTTTTAGTGAGGTaGTTTGATCATCTTCAAGAA +
Preference number: 2 (lower is better)
Translates to: RIRTRNSLILSTAEKHMLAFLVR*FDHLQE
Trigger: TTCTTGAAGATGATCAAAGCACCTCACTAAAAATGC...GAGCATATGTTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCGGATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR TCA 72 bp TGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTaGACCGAGTTGGGCCCTGGGCAGCCAGAGCCACAC +
Preference number: 3 (lower is better)
Translates to: WPKAGQGAARSV*TELGPGQPEPH
Trigger: GTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 72 bp GGGAGCAGCACGATCCGTGTGAACCGAGTTGGGCCCTaGGCAGCCAGAGCCACACATTCCCTCTCCATGGGC +
Preference number: 3 (lower is better)
Translates to: GSSTIRVNRVGP*AARATHSLSMG
Trigger: GCCCATGGAGAGGGAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 72 bp CTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGTTaGGCCCTGGGCAGCCAGAGCCACACATTCCCTCTC +
Preference number: 3 (lower is better)
Translates to: LAREQHDPCEPS*ALGSQSHTFPL
Trigger: GAGAGGGAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 72 bp CAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTaGGCTGTTAGGCCAGCCCGGCATCTCCTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: QSRNSVSEFRST*AVRPARHLLKA
Trigger: GGCCTTCAGGAGATGCCGGGCTGGCCTAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 72 bp TTGAGACAGGTGGAGGAGTGTGAAATGCAGCCCCCGTaGGGAGACCCATCACATGTCCCATGTGCACAGGCT +
Preference number: 3 (lower is better)
Translates to: LRQVEECEMQPP*GDPSHVPCAQA
Trigger: AGCCTGTGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTTCACACTCCTCCACCTGTCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 72 bp CAGTGCAGTCCCAGGGCCAGCAGCATCAGCATCCCCTaGGAACATGTTAGAATGGCAGTCTCAGGCTCTACG +
Preference number: 3 (lower is better)
Translates to: QCSPRASSISIP*EHVRMAVSGST
Trigger: CGTAGAGCCTGAGACTGCCATTCTAACATGTTCCCAGGGGATGCTGATGCTGCTGGCCCTGGGACTGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 72 bp GTGCCGACCTTAGAGTTTGAGACAGGTGGAGGAGTGTaGAATGCAGCCCCCGTGGGGAGACCCATCACATGT +
Preference number: 3 (lower is better)
Translates to: VPTLEFETGGGV*NAAPVGRPITC
Trigger: ACATGTGATGGGTCTCCCCACGGGGGCTGCATTTCACACTCCTCCACCTGTCTCAAACTCTAAGGTCGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 72 bp GGAAGTGTGCTGGGATGCCACACAAGCAAACAGCCCTaGGGAGCTCTGTGGCTCCATTTTCAGCTGCAGGGA +
Preference number: 3 (lower is better)
Translates to: GSVLGCHTSKQP*GALWLHFQLQG
Trigger: TCCCTGCAGCTGAAAATGGAGCCACAGAGCTCCTCAGGGCTGTTTGCTTGTGTGGCATCCCAGCACACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR GCA 72 bp GAGACTTTCACAGGGAGGTTCTGCAGGCAGGAAGTGTaGTGGGATGCCACACAAGCAAACAGCCCTGAGGAG +
Preference number: 3 (lower is better)
Translates to: ETFTGRFCRQEV*WDATQANSPEE
Trigger: CTCCTCAGGGCTGTTTGCTTGTGTGGCATCCCAGCACACTTCCTGCCTGCAGAACCTCCCTGTGAAAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR CCA 72 bp CCCACTTCAATGCTGCTTCTCCCCCAAGGGGAACTTTaGGGTGCAGAGGCTGAAACAGCAGTTGGAGAGACG +
Preference number: 3 (lower is better)
Translates to: PTSMLLLPQGEL*GAEAETAVGET
Trigger: CGTCTCTCCAACTGCTGTTTCAGCCTCTGCACCCCAAAGTTCCCCTTGGGGGAGAAGCAGCATTGAAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 72 bp CCAGCAGCATCAGCATCCCCTGGGAACATGTTAGAATaGCAGTCTCAGGCTCTACGCAGACCCACTGAATCA +
Preference number: 3 (lower is better)
Translates to: PAASASPGNMLE*QSQALRRPTES
Trigger: TGATTCAGTGGGTCTGCGTAGAGCCTGAGACTGCCATTCTAACATGTTCCCAGGGGATGCTGATGCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 72 bp GAAGTTACCTTGGTGTCAAGTGCCGACCTTAGAGTTTaGGACAGGTGGAGGAGTGTGAAATGCAGCCCCCGT +
Preference number: 3 (lower is better)
Translates to: EVTLVSSADLRV*DRWRSVKCSPR
Trigger: ACGGGGGCTGCATTTCACACTCCTCCACCTGTCTCAAACTCTAAGGTCGGCACTTGACACCAAGGTAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CAA 90 bp AGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAAAAGGCCCACTCTCCCTTaGTGTGGTAAGACCCCCTCT +
Preference number: 3 (lower is better)
Translates to: SELPMPLEGFYFRAVGLKRPTLP*CGKTPS
Trigger: AGAGGGGGTCTTACCACACAAAGGGAGAGTGGGCCT...TTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 72 bp GAAAGCCACTTACTTGGGCAGGTAGACACTGACACATaGGCAGGAGAGAAGTTACCTTGGTGTCAAGTGCCG +
Preference number: 3 (lower is better)
Translates to: ESHLLGQVDTDT*AGEKLPWCQVP
Trigger: CGGCACTTGACACCAAGGTAACTTCTCTCCTGCTCATGTGTCAGTGTCTACCTGCCCAAGTAAGTGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR GCA 72 bp TTTAACTGGGAAACAGGTGACAGTCCAGCAGGGCCCTaGATTCTGGTCAGACTGAGAATGAGGACATGTGAA +
Preference number: 3 (lower is better)
Translates to: FNWETGDSPAGP*ILVRLRMRTCE
Trigger: TTCACATGTCCTCATTCTCAGTCTGACCAGAATGCAGGGCCCTGCTGGACTGTCACCTGTTTCCCAGTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 72 bp ACAAAGATAGTGGCAGCTACTTTCCGCTTCCCAGGGTaGCTGATGAAAGCCAACATGTCACAGAGAAGAAGC +
Preference number: 3 (lower is better)
Translates to: TKIVAATFRFPG*LMKANMSQRRS
Trigger: GCTTCTTCTCTGTGACATGTTGGCTTTCATCAGCCACCCTGGGAAGCGGAAAGTAGCTGCCACTATCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CAA 90 bp AGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAAAGAGAAGCCCTTCCTCTaGCTGAACAGTTTCCTCATC +
Preference number: 3 (lower is better)
Translates to: SELPMPLEGFYFRAVGLKEKPFL*LNSFLI
Trigger: GATGAGGAAACTGTTCAGCAAGAGGAAGGGCTTCTC...TTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 72 bp GGAGAGGGCTCAGGTTATATACATTCACCCTTTTCATaGGAAAGTGTGAGGCCTGAGGTGGGGAAACAAAGA +
Preference number: 3 (lower is better)
Translates to: GEGSGYIHSPFS*ESVRPEVGKQR
Trigger: TCTTTGTTTCCCCACCTCAGGCCTCACACTTTCCCATGAAAAGGGTGAATGTATATAACCTGAGCCCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CAA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGCTGGTCCTCCTGGCCTaGACTTGCTGGGTTACTTCT +
Preference number: 3 (lower is better)
Translates to: IFQFASESRKTYVPAQSRLVLLA*TCWVTS
Trigger: AGAAGTAACCCAGCAAGTCAAGGCCAGGAGGACCAG...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 72 bp TTATGTCCCAGCCCAAAGCAGGAGTTCCCCCTTACTTaGGGAAGAATAAGCCCTTTTGTTACATTCAGGCCT +
Preference number: 3 (lower is better)
Translates to: LCPSPKQEFPLT*GRISPFVTFRP
Trigger: AGGCCTGAATGTAACAAAAGGGCTTATTCTTCCTCAAGTAAGGGGGAACTCCTGCTTTGGGCTGGGACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 72 bp TTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTaGGGCTTAAAAGTCATCACTGTACAATCCACTGGG +
Preference number: 3 (lower is better)
Translates to: FQCPWKDFISGP*GLKVITVQSTG
Trigger: CCCAGTGGATTGTACAGTGATGACTTTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CCA 72 bp TTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTaGACCTCCTCTCTCTTTGGTATTGAGTGCACTGCA +
Preference number: 3 (lower is better)
Translates to: FSVIILPSQVQV*TSSLFGIECTA
Trigger: TGCAGTGCACTCAATACCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR-3UTR CAA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGAGGAGAGAAGTTACCTaGGTGTCAAGTGCCGACCTT +
Preference number: 3 (lower is better)
Translates to: IFQFASESRKTYVPAQSRRREVT*VSSADL
Trigger: AAGGTCGGCACTTGACACCAAGGTAACTTCTCTCCT...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 72 bp CAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTaGGAGCCAGTCATAATGCGGTTTCCTCATTATGAG +
Preference number: 3 (lower is better)
Translates to: QRSLTSLICSQG*EPVIMRFPHYE
Trigger: CTCATAATGAGGAAACCGCATTATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR CCA 72 bp GAGGCTGACATATCTCAAGATCTGCAGTCAGCAAGCTaGAGATCCAGGAGATCCAATAGCATAGTTTCTTTC +
Preference number: 3 (lower is better)
Translates to: EADISQDLQSAS*RSRRSNSIVSF
Trigger: GAAAGAAACTATGCTATTGGATCTCCTGGATCTCCAGCTTGCTGACTGCAGATCTTGAGATATGTCAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR TCA 72 bp TCAAGACCCAAGAAGAGCCATTTTTCAGTTTGCGTCTaGAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAG +
Preference number: 3 (lower is better)
Translates to: SRPKKSHFSVCV*KQKNLCPSPKQ
Trigger: CTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAATGGCTCTTCTTGGGTCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CAA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGGAGCTTCCAATGCCCTaGGAAGGATTTTATTTCAGG +
Preference number: 3 (lower is better)
Translates to: IFQFASESRKTYVPAQSRELPMP*EGFYFR
Trigger: CCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTC...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR-3UTR CAA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATTCCCCTCTTATCATCTaGTCATATCATCTGTCCACT +
Preference number: 3 (lower is better)
Translates to: FTKVFDESNMQPGLRASHSPLII*SYHLST
Trigger: AGTGGACAGATGATATGACAAGATGATAAGAGGGGA...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR GCA 72 bp GTCCAAGTCTGGACCTCCTCTCTCTTTGGTATTGAGTaGACTGCAAAGTCTAAGACTAACTTGATGTTTTTC +
Preference number: 3 (lower is better)
Translates to: VQVWTSSLFGIE*TAKSKTNLMFF
Trigger: GAAAAACATCAAGTTAGTCTTAGACTTTGCAGTGCACTCAATACCAAAGAGAGAGGAGGTCCAGACTTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR CCA 72 bp TTAGTGAGGTGCTTTGATCATCTTCAAGAAGACTGCTaGGAAACATCAGATTCCTGGAACCATACCACAAAG +
Preference number: 3 (lower is better)
Translates to: LVRCFDHLQEDC*ETSDSWNHTTK
Trigger: CTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATCAAAGCACCTCACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR-3UTR CAA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATAAAATTGGCGTACTGTaGGAACATACAAGGAATGAG +
Preference number: 3 (lower is better)
Translates to: FTKVFDESNMQPGLRASHKIGVL*EHTRNE
Trigger: CTCATTCCTTGTATGTTCCAACAGTACGCCAATTTT...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR-3UTR CAA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTACTAAATTACAAATGTaGACTGAGGACCTACTGTGT +
Preference number: 3 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSTKLQM*TEDLLC
Trigger: ACACAGTAGGTCCTCAGTCAACATTTGTAATTTAGT...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR-3UTR CAA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATTCGTACACATACAATTaGCACACGTTTCTTGAATGT +
Preference number: 3 (lower is better)
Translates to: FTKVFDESNMQPGLRASHSYTYN*HTFLEC
Trigger: ACATTCAAGAAACGTGTGCAAATTGTATGTGTACGA...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR TCA 72 bp GGGTTGAGAGCCAGTCATAATGCGGTTTCCTCATTATaGGTCCTTTATATTCATTTACATCTTGTTGGGCTA +
Preference number: 3 (lower is better)
Translates to: GLRASHNAVSSL*VLYIHLHLVGL
Trigger: TAGCCCAACAAGATGTAAATGAATATAAAGGACTCATAATGAGGAAACCGCATTATGACTGGCTCTCAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR TCA 72 bp AAGGTTGAACCAATTTACGCTTGTAATAATGGCGTATaGGAGTTTCTGTTTCCTCTTTCCCTGATCATTTGT +
Preference number: 3 (lower is better)
Translates to: KVEPIYACNNGV*EFLFPLSLIIC
Trigger: ACAAATGATCAGGGAAAGAGGAAACAGAAACTCTCATACGCCATTATTACAAGCGTAAATTGGTTCAACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
3UTR GCA 72 bp GCTCCTAAAAAGACACCAAATCGTACACATACAATTTaGACACGTTTCTTGAATGTATGTCATACTTCAACA +
Preference number: 3 (lower is better)
Translates to: APKKTPNRTHTI*TRFLNVCHTST
Trigger: TGTTGAAGTATGACATACATTCAAGAAACGTGTGCAAATTGTATGTGTACGATTTGGTGTCTTTTTAGGAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp GTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGTTGGGCCCGGGAACCCTTGTTCCTaGGATGCCTGGGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VAKGWPGSSTIRVNRVGPGNPCS*DAWGQR
Trigger: CCTCTGACCCCAGGCATCTCAGGAACAAGGGTTCCC...GGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp TGGTGGTGCTGTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGCCCCGGCGACTCCTGTaGCAAAAGGGCCACTTCTGT +
Preference number: 4 (lower is better)
Translates to: WWCCGQRLAREQHDPCEPPRRLL*QKGHFC
Trigger: ACAGAAGTGGCCCTTTTGCCACAGGAGTCGCCGGGG...CGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGCACCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp TGGTGGTGCTGTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGCCCTTGTTCCTGAGATaGCTGGGGTCAGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: WWCCGQRLAREQHDPCEPPLFLR*LGSEAT
Trigger: AGTGGCCTCTGACCCCAGGCATCTCAGGAACAAGGG...CGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGCACCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCGGCTCACAGCCTTACTaGGCTTGGCGCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFGSQPY*AWRQGH
Trigger: ATGGCCTTGGCGCCAAGCCCAGTAAGGCTGTGAGCC...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp TGGTGGTGCTGTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGTATGTGTTCTGTCTaGACCCCTGGTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: WWCCGQRLAREQHDPCEPSMCSV*TPGPPG
Trigger: GCCAGGAGGACCAGGGGTGCAGACAGAACACATACT...CGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCGAAATGCAGCCCCCGTaGGGAGACCCATCACATGTC +
Preference number: 4 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFEMQPP*GDPSHV
Trigger: GACATGTGATGGGTCTCCCCACGGGGGCTGCATTTC...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCTCCTCCTTGAAAGGTTaGGGCAGCAGAGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFSSLKG*GSRASP
Trigger: AGGGCTGGCTCTGCTGCCCCAACCTTTCAAGGAGGA...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCGCCGACCTTAGAGTTTaGGACAGGTGGAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFADLRV*DRWRSV
Trigger: CACACTCCTCCACCTGTCTCAAACTCTAAGGTCGGC...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp GTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGTTGGGCCCGCGAGACACCGGAACTaGAACTTTCAGTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: VAKGWPGSSTIRVNRVGPARHRN*NFQCHH
Trigger: ATGGTGACACTGAAAGTTGCAGTTCCGGTGTCTCGC...GGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp GGCAGGAAGTGTGCTGGGATGCCACACAAGCAAACAGCCCTGAGGAGCTCTGTGGAGACACGGGAACAGTaGCTGAGAGGCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: GRKCAGMPHKQTALRSSVETREQ*LRGSQP
Trigger: AGGCTGTGAGCCTCTCAGTCACTGTTCCCGTGTCTC...CACAGAGCTCCTCAGGGCTGTTTGCTTGTGTGGCATCCCAGCACACTTCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp GTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGTTGGGCCCGAGACACTGGAACAGTaGCAAAAAGGCTCACCACTT +
Preference number: 4 (lower is better)
Translates to: VAKGWPGSSTIRVNRVGPETLEQ*QKGSPL
Trigger: AAGTGGTGAGCCTTTTTGTCACTGTTCCAGTGTCTC...GGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp AAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCACAGGCTGTGTTTCACATGCATGCAGTaGAGTCCCAGGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KCSPRGETHHMSHVHRLCFTCMQ*SPRASS
Trigger: GCTGCTGGCCCTGGGACTGCACTGCATGCATGTGAA...ACACAGCCTGTGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp ACAGACTGGACGGGGTCCACCCACATTAGGGTGGAGTTTGTTCTGCCACTGTGCGGGGAGCCCTGGGCCTaGCATCTGTACTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: TDWTGSTHIRVEFVLPLCGEPWA*HLYSPD
Trigger: ATCTGGAGAGTACAGATGCCAGGCCCAGGGCTCCCC...GCACAGTGGCAGAACAAACTCCACCCTAATGTGGGTGGACCCCGTCCAGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCACAGGCTGTGTAGCAACAGCAGCTGGTaGTGCTGTGGCCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KCSPRGETHHMSHVHRLCSNSSW*CCGQRL
Trigger: CAGCCTTTGGCCACAGCACCACCAGCTGCTGTTGCT...ACACAGCCTGTGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp GTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGTTGGGCCCCATTCACCCTTTTCATaGGAAAGTGTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VAKGWPGSSTIRVNRVGPHSPFS*ESVRPE
Trigger: CTCAGGCCTCACACTTTCCCATGAAAAGGGTGAATG...GGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCTCGGGCTGTCAGATATaGCGCTGTAAGGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFSGCQI*RCKALL
Trigger: CAACAATGCCTTACAGCGTCATATCTGACAGCCCGA...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp ATGTGCACAGGCTGTGTGCTGTCCCATTTGGCAGCACACTGCAGTAGCCCCACCAGAGTGAGGACAGGATaGGATGCAGGGATCTGCACC +
Preference number: 4 (lower is better)
Translates to: MCTGCVLSHLAAHCSSPTRVRTG*DAGICT
Trigger: GGTGCAGATCCCTGCATCTCATCCTGTCCTCACTCT...GGTGGGGCTACTGCAGTGTGCTGCCAAATGGGACAGCACACAGCCTGTGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp ACTTGGAAGCATGAAAAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGCAAGGCCTGCTATGCTaGGCAGGCCCCCGGCGACTC +
Preference number: 4 (lower is better)
Translates to: TWKHEKPWFRWSELPMPLQGLLC*AGPRRL
Trigger: GAGTCGCCGGGGGCCTGCTCAGCATAGCAGGCCTTG...CAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTTTTCATGCTTCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp ATGTGCACAGGCTGTGTGCTGTCCCATTTGGCAGCACACTGCAGTAGCCCCACCAAGGCTGCACTGGGCTaGATACAGGCTCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: MCTGCVLSHLAAHCSSPTKAALG*IQAPVS
Trigger: TGAGACAGGAGCCTGTATGCAGCCCAGTGCAGCCTT...GGTGGGGCTACTGCAGTGTGCTGCCAAATGGGACAGCACACAGCCTGTGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCACAGGCTGTGTCCCCAAGGGGAACTTTaGGGTGCAGAGGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: KCSPRGETHHMSHVHRLCPQGEL*GAEAET
Trigger: TGTTTCAGCCTCTGCACCCCAAAGTTCCCCTTGGGG...ACACAGCCTGTGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp CATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTGAGCTGTTACCGTGTGAACCGAGTTaGGCCCTGGGCAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: HPPKAGTLCRSLGAPELLPCEPS*ALGSQS
Trigger: GCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGG...TAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp GAGGAGTGTGAAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCATTGCAAACTGTCCACTaGCAGGAGCCAGGACCAGTA +
Preference number: 4 (lower is better)
Translates to: EECEMQPPWGDPSHVPCALQTVH*QEPGPV
Trigger: TACTGGTCCTGGCTCCTGTCAGTGGACAGTTTGCAA...TGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTTCACACTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTGAGCTGTTAGAGACACAGGGACAGTaGCGGAGAGGCTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: HPPKAGTLCRSLGAPELLETQGQ*RRGSPP
Trigger: AGGCGGTGAGCCTCTCCGTCACTGTCCCTGTGTCTC...TAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp GAGGAGTGTGAAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCATCATCTGTGAGGAGCTaGGGAAGCCAAGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: EECEMQPPWGDPSHVPCASSVRS*GSQEQG
Trigger: TCCCTGTTCTTGGCTTCCTCAGCTCCTCACAGATGA...TGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTTCACACTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp GAGGAGTGTGAAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCACAGCTCTTCCCAGGCTaGTACATTGTGATAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EECEMQPPWGDPSHVPCAQLFPG*YIVIGG
Trigger: CCCACCTATCACAATGTACCAGCCTGGGAAGAGCTG...TGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTTCACACTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp CATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTGAGCTGTTAGCTGTGGCCAAAGGCTaGCCAGGGAGCAGCACGATC +
Preference number: 4 (lower is better)
Translates to: HPPKAGTLCRSLGAPELLAVAKG*PGSSTI
Trigger: GATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGC...TAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCACAGGCTGTGTAAGCCATGGTTCAGGTaGAGTGAGCTTCCAATGCCC +
Preference number: 4 (lower is better)
Translates to: KCSPRGETHHMSHVHRLCKPWFR*SELPMP
Trigger: GGGCATTGGAAGCTCACTCCACCTGAACCATGGCTT...ACACAGCCTGTGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CAATTGAGAAATGCATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCAGTGCACAGGGCTACTaGGAGGGGAGCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QLRNASTQSRNSVSEFRSSAQGY*EGSPGP
Trigger: AGGCCCAGGGCTCCCCTCTCAGTAGCCCTGTGCACT...GCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATGCATTTCTCAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CAAAGGCCAGTAGATATGGTCTGGGGCAGCCTAAATCTTCCCACTTCAATGCTGTCACTGGGTTCCCGCTaGTGGGCTGGAAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QRPVDMVWGSLNLPTSMLSLGSR*WAGRSW
Trigger: CCAGCTCCTTCCAGCCCATCAGCGGGAACCCAGTGA...CAGCATTGAAGTGGGAAGATTTAGGCTGCCCCAGACCATATCTACTGGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGTCACTGGGTTCCCGCTaGTGGGCTGGAAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWSLGSR*WAGRSW
Trigger: CCAGCTCCTTCCAGCCCATCAGCGGGAACCCAGTGA...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp AGCTACTTTCCGCTTCCCAGGGTGGCTGATGAAAGCCAACATGTCACAGAGAAGGGGTCTGGTCATCTCTaGAGAAGCGGAACCGGAGCG +
Preference number: 4 (lower is better)
Translates to: SYFPLPRVADESQHVTEKGSGHL*RSGTGA
Trigger: CGCTCCGGTTCCGCTTCTTCAGAGATGACCAGACCC...CTTCTCTGTGACATGTTGGCTTTCATCAGCCACCCTGGGAAGCGGAAAGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTGAGCTGTTACCTTTCACAGCGGACTaGCTTGTGCCTCAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: HPPKAGTLCRSLGAPELLPFTAD*LVPQGD
Trigger: GTCCCCCTGAGGCACAAGTCAGTCCGCTGTGAAAGG...TAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CAATTGAGAAATGCATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCTTGGGAGTCCGAGTCTaGAGGGCTCCTGGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: QLRNASTQSRNSVSEFRSLGVRV*RAPGGV
Trigger: GACCCCGCCAGGAGCCCTTCAGACTCGGACTCCCAA...GCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATGCATTTCTCAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTGAGTTTAGGAGCACCTaGGCTGTTAGGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLEFRST*AVRPAR
Trigger: CCGGGCTGGCCTAACAGCTCAGGTGCTCCTAAACTC...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCTGCTGCTGTCCTTCTTaGCTTTCAACTAGGCCTAAA +
Preference number: 4 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFCCCPS*LSTRPK
Trigger: TTTAGGCCTAGTTGAAAGTCAAGAAGGACAGCAGCA...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp ACAGACTGGACGGGGTCCACCCACATTAGGGTGGAGTTTGTTCTGCCACTGTGCTTCCCACTTCAATGCTaGTTCTCCCCCAAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TDWTGSTHIRVEFVLPLCFPLQC*FSPKGN
Trigger: GTTCCCCTTGGGGGAGAAGCAGCATTGAAGTGGGAA...GCACAGTGGCAGAACAAACTCCACCCTAATGTGGGTGGACCCCGTCCAGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp AGCTACTTTCCGCTTCCCAGGGTGGCTGATGAAAGCCAACATGTCACAGAGAAGGGAATCCAGGAGATGTaGTGGGCCCTGGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SYFPLPRVADESQHVTEKGIQEM*WALEWE
Trigger: CTCCCACTCCAGGGCCCAGCACATCTCCTGGATTCC...CTTCTCTGTGACATGTTGGCTTTCATCAGCCACCCTGGGAAGCGGAAAGTAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp GTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGTTGGGCCCCGTGTAAATGGCTCTTaGACTTGGATTTTGACTGTA +
Preference number: 4 (lower is better)
Translates to: VAKGWPGSSTIRVNRVGPRVNGS*TWILTV
Trigger: TACAGTCAAAATCCAAGTCCAAGAGCCATTTACACG...GGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp GGAACAGAACATCCCATTGCTCAGAGATGGGAGAACAACTCTGAATGGAGAGGGAGTCTGAAGGGCTCCTaGCGGGGTCAGAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GTEHPIAQRWENNSEWRGSLKGS*RGQRQA
Trigger: AGCCTGCCTCTGACCCCGCCAGGAGCCCTTCAGACT...CCCTCTCCATTCAGAGTTGTTCTCCCATCTCTGAGCAATGGGATGTTCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AGCTACTTTCCGCTTCCCAGGGTGGCTGATGAAAGCCAACATGTCACAGAGAAGATCCAGGAGATGTGCTaGGCCCTGGAGTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SYFPLPRVADESQHVTEKIQEMC*ALEWEH
Trigger: GTGCTCCCACTCCAGGGCCCAGCACATCTCCTGGAT...CTTCTCTGTGACATGTTGGCTTTCATCAGCCACCCTGGGAAGCGGAAAGTAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCACAGGCTGTGTGGGAACATGTTAGAATaGCAGTCTCAGGCTCTACGC +
Preference number: 4 (lower is better)
Translates to: KCSPRGETHHMSHVHRLCGNMLE*QSQALR
Trigger: GCGTAGAGCCTGAGACTGCCATTCTAACATGTTCCC...ACACAGCCTGTGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTTCACCCACAGCAGCATaGAGACCTGGACCACCAAGG +
Preference number: 4 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLSPTAA*RPGPPR
Trigger: CCTTGGTGGTCCAGGTCTTCATGCTGCTGTGGGTGA...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp TGGTGGTGCTGTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGTTTTGTTTTCTGTGGTaGGTAGAAGCGAAATCCCTT +
Preference number: 4 (lower is better)
Translates to: WWCCGQRLAREQHDPCEPFCFLW*VEAKSL
Trigger: AAGGGATTTCGCTTCTACTCACCACAGAAAACAAAA...CGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGCACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp GGGAAACATCAGATTCCTGGAACCATACCACAAAGGATCCGAGACTTTCACAGGTCACTGGGTTCCCGCTaGTGGGCTGGAAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GKHQIPGTIPQRIRDFHRSLGSR*WAGRSW
Trigger: CCAGCTCCTTCCAGCCCATCAGCGGGAACCCAGTGA...CCTGTGAAAGTCTCGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCGATGATCCGTACTTCTaGGTAAACCACATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFDDPYF*VNHIFS
Trigger: GGAGAAAATGTGGTTTACTCAGAAGTACGGATCATC...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGCAGCGGACTGACTTGTaGCTCAGGGGGACACCCTCA +
Preference number: 4 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWQRTDL*LRGTPS
Trigger: TGAGGGTGTCCCCCTGAGGCACAAGTCAGTCCGCTG...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CCA 90 bp ACAGACTGGACGGGGTCCACCCACATTAGGGTGGAGTTTGTTCTGCCACTGTGCGTACATTGTGATAGGTaGGCTCTTGGGAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: TDWTGSTHIRVEFVLPLCVHCDR*ALGSPS
Trigger: ACTCGGACTCCCAAGAGCCCACCTATCACAATGTAC...GCACAGTGGCAGAACAAACTCCACCCTAATGTGGGTGGACCCCGTCCAGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp ACAGACTGGACGGGGTCCACCCACATTAGGGTGGAGTTTGTTCTGCCACTGTGCTGCATTAGTGTACACTaGTTGCAGCTCTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TDWTGSTHIRVEFVLPLCCISVH*LQLFPG
Trigger: GCCTGGGAAGAGCTGCAACCAGTGTACACTAATGCA...GCACAGTGGCAGAACAAACTCCACCCTAATGTGGGTGGACCCCGTCCAGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp ACTTGGAAGCATGAAAAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGAGATGTGCTGGGCCCTaGAGTGGGAGCACCTTGCCA +
Preference number: 4 (lower is better)
Translates to: TWKHEKPWFRWSELPMPLRCAGP*SGSTLP
Trigger: TGGCAAGGTGCTCCCACTCCAGGGCCCAGCACATCT...CAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTTTTCATGCTTCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTTCTGCAAGGCTGCACTaGGCTGCATACAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLSARLH*AAYRLL
Trigger: CAGGAGCCTGTATGCAGCCCAGTGCAGCCTTGCAGA...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCACAGGCTGTGTAAAAAGCGGCCTCGGTaGGAATGCATTTCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KCSPRGETHHMSHVHRLCKKRPR*ECISLA
Trigger: AGCAAGAGAAATGCATTCCCACCGAGGCCGCTTTTT...ACACAGCCTGTGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATAGTGCACAGGGCTACTaGGAGGGGAGCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FTKVFDESNMQPGLRASHSAQGY*EGSPGP
Trigger: AGGCCCAGGGCTCCCCTCTCAGTAGCCCTGTGCACT...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp GACTGCTGGGAAACATCAGATTCCTGGAACCATACCACAAAGGATCCGAGACTTGGGTCTGGTCATCTCTaGAGAAGCGGAACCGGAGCG +
Preference number: 4 (lower is better)
Translates to: DCWETSDSWNHTTKDPRLGSGHL*RSGTGA
Trigger: CGCTCCGGTTCCGCTTCTTCAGAGATGACCAGACCC...AAGTCTCGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTCACGGGAACAGTGACTaGGAGGCTCACAGCCTTACT +
Preference number: 4 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLHGNSD*EAHSLT
Trigger: AGTAAGGCTGTGAGCCTCTCAGTCACTGTTCCCGTG...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTGAGCTGTTAGTGTGGACTCATCTGTaGGGAGCTGAGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: HPPKAGTLCRSLGAPELLVWTHL*GAEEAK
Trigger: CTTGGCTTCCTCAGCTCCTCACAGATGAGTCCACAC...TAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTTTGGGGTGCAGAGGCTaGAACAGCAGTTGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLLGCRG*NSSWRD
Trigger: GTCTCTCCAACTGCTGTTTCAGCCTCTGCACCCCAA...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTTGGTCCTCCTGGCCTTaGCTTGCTGGGTTACTTCTG +
Preference number: 4 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLWSSWP*LAGLLL
Trigger: CAGAAGTAACCCAGCAAGTCAAGGCCAGGAGGACCA...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp GTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTTCGCAGCACGATCCGTGTaGACCGAGTTGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VSFSPYASKLKTQEEPFFAARSV*TELGPG
Trigger: CCCAGGGCCCAACTCGGTTCACACGGATCGTGCTGC...GAAAAATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp AAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCACAGGCTGTGTTCCAGTACAGCGATATaGACCATTGTCCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: KCSPRGETHHMSHVHRLCSSTAI*TIVLET
Trigger: TGTCTCAAGGACAATGGTGCATATCGCTGTACTGGA...ACACAGCCTGTGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp GGTTCTGCAGGCAGGAAGTGTGCTGGGATGCCACACAAGCAAACAGCCCTGAGGGCTGTAAGGCATTGTTaGTGCCTTACACCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: GSAGRKCAGMPHKQTALRAVRHC*CLTPVE
Trigger: TTCTACTGGTGTAAGGCAGCAACAATGCCTTACAGC...CCTCAGGGCTGTTTGCTTGTGTGGCATCCCAGCACACTTCCTGCCTGCAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR GCA 90 bp CAATTGAGAAATGCATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCCAGCGGACTGACTTGTaGCTCAGGGGGACACCCTCA +
Preference number: 4 (lower is better)
Translates to: QLRNASTQSRNSVSEFRSQRTDL*LRGTPS
Trigger: TGAGGGTGTCCCCCTGAGGCACAAGTCAGTCCGCTG...GCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATGCATTTCTCAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCTTCTCCTCTAGGATTTaGATTAGTGTACACTGGTTG +
Preference number: 4 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFFSSRI*ISVHWL
Trigger: CAACCAGTGTACACTAATGCAAATCCTAGAGGAGAA...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp CATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTGAGCTGTTAAGTCCAGCAGGGCCCTaGATTCTGGTCAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: HPPKAGTLCRSLGAPELLSPAGP*ILVRLR
Trigger: TCTCAGTCTGACCAGAATGCAGGGCCCTGCTGGACT...TAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTTGTGCACAGGCTGTGTaGTGTCCCATTTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLCAQAV*CPIWQH
Trigger: GTGCTGCCAAATGGGACAGCACACAGCCTGTGCACA...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp AGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAAATCCAGCCTTGTCCTCTaGAAGGCTGCACTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SELPMPLEGFYFRAVGLKSSLVL*KAALGC
Trigger: GCAGCCCAGTGCAGCCTTGCAGAGGACAAGGCTGGA...TTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp TGGTGGTGCTGTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGTGTTTCTTTTTCTCTTaGATGATCCGTACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: WWCCGQRLAREQHDPCEPCFFFS*MIRTSE
Trigger: CTCAGAAGTACGGATCATCCAAGAGAAAAAGAAACA...CGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGCACCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTGTAAGACCCCCTCTGTaGGGGTGTGATGAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLVRPPL*GCDESS
Trigger: ACTGCTCTCATCACACCCCCACAGAGGGGGTCTTAC...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AGCTACTTTCCGCTTCCCAGGGTGGCTGATGAAAGCCAACATGTCACAGAGAAGGTGTGCTGTCCCATTTaGCAGCACACTGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SYFPLPRVADESQHVTEKVCCPI*QHTAVA
Trigger: GGCTACTGCAGTGTGCTGCCAAATGGGACAGCACAC...CTTCTCTGTGACATGTTGGCTTTCATCAGCCACCCTGGGAAGCGGAAAGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp AAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCACAGGCTGTGTAAACAGGTTTGGACTTaGTCTTACAGTCAGGACACT +
Preference number: 4 (lower is better)
Translates to: KCSPRGETHHMSHVHRLCKQVWT*SYSQDT
Trigger: AGTGTCCTGACTGTAAGATCAAGTCCAAACCTGTTT...ACACAGCCTGTGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp GGCAGGAAGTGTGCTGGGATGCCACACAAGCAAACAGCCCTGAGGAGCTCTGTGTACTCTCCAGATTCCTaGACCTCAAGGATATTGTCT +
Preference number: 4 (lower is better)
Translates to: GRKCAGMPHKQTALRSSVYSPDS*TSRILS
Trigger: AGACAATATCCTTGAGGTTCAGGAATCTGGAGAGTA...CACAGAGCTCCTCAGGGCTGTTTGCTTGTGTGGCATCCCAGCACACTTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTGGGTCTGGTCATCTCTaGAGAAGCGGAACCGGAGCG +
Preference number: 4 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSGSGHL*RSGTGA
Trigger: CGCTCCGGTTCCGCTTCTTCAGAGATGACCAGACCC...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTCCTTTCACAGCGGACTaGCTTGTGCCTCAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSPFTAD*LVPQGD
Trigger: GTCCCCCTGAGGCACAAGTCAGTCCGCTGTGAAAGG...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGCACGGGAACAGTGACTaGGAGGCTCACAGCCTTACT +
Preference number: 4 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWHGNSD*EAHSLT
Trigger: AGTAAGGCTGTGAGCCTCTCAGTCACTGTTCCCGTG...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp CAATTGAGAAATGCATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCGAGACACGGGAACAGTaGCTGAGAGGCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: QLRNASTQSRNSVSEFRSETREQ*LRGSQP
Trigger: AGGCTGTGAGCCTCTCAGTCACTGTTCCCGTGTCTC...GCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATGCATTTCTCAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp ACACTGAGTAGGCACAGGGATGTTGTGAAGACCAAGATGGATGCAGTTCTGTTCGAGACACGGGAACAGTaGCTGAGAGGCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: TLSRHRDVVKTKMDAVLFETREQ*LRGSQP
Trigger: AGGCTGTGAGCCTCTCAGTCACTGTTCCCGTGTCTC...GAACAGAACTGCATCCATCTTGGTCTTCACAACATCCCTGTGCCTACTCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATGAGACACAGGGACAGTaGCGGAGAGGCTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: FTKVFDESNMQPGLRASHETQGQ*RRGSPP
Trigger: AGGCGGTGAGCCTCTCCGTCACTGTCCCTGTGTCTC...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp AGGTGCTTTGATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTGGAACGAGACACAGGGACAGTaGCGGAGAGGCTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: RCFDHLQEDCWETSDSWNETQGQ*RRGSPP
Trigger: AGGCGGTGAGCCTCTCCGTCACTGTCCCTGTGTCTC...GTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATCAAAGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR GCA 90 bp AGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAAACATTTGGCAGCACACTaGAGTAGCCCCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SELPMPLEGFYFRAVGLKHLAAH*SSPTRL
Trigger: CAGCCTGGTGGGGCTACTGCAGTGTGCTGCCAAATG...TTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp AAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCTGGAGGAGTGTGAAATaGAGCCCCCGTGGGGAGACC +
Preference number: 4 (lower is better)
Translates to: KPWFRWSELPMPLEGFYFWRSVK*SPRGET
Trigger: GGTCTCCCCACGGGGGCTGCATTTCACACTCCTCCA...GAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp AGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAAAAGGGCTTCACATGCATaGAGTGCAGTCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SELPMPLEGFYFRAVGLKRASHA*SAVPGP
Trigger: TGGCCCTGGGACTGCACTGCATGCATGTGAAGCCCT...TTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp ATGTGCACAGGCTGTGTGCTGTCCCATTTGGCAGCACACTGCAGTAGCCCCACCAACAGAACATCCCATTaGTCAGAGATGGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: MCTGCVLSHLAAHCSSPTNRTSH*SEMGEQ
Trigger: TTGTTCTCCCATCTCTGAGCAATGGGATGTTCTGTT...GGTGGGGCTACTGCAGTGTGCTGCCAAATGGGACAGCACACAGCCTGTGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp AAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCACAGGCTGTGTACATATCTCAAGATCTaGAGTCAGCAAGCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: KCSPRGETHHMSHVHRLCTYLKI*SQQAGD
Trigger: ATCTCCAGCTTGCTGACTGCAGATCTTGAGATATGT...ACACAGCCTGTGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp GGGAAACATCAGATTCCTGGAACCATACCACAAAGGATCCGAGACTTTCACAGGAGTTCTCAGATGTGCTaGTGGTGGGCAGGGCCCACT +
Preference number: 4 (lower is better)
Translates to: GKHQIPGTIPQRIRDFHRSSQMC*WWAGPT
Trigger: AGTGGGCCCTGCCCACCAGCAGCACATCTGAGAACT...CCTGTGAAAGTCTCGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CCA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTGGGGAGCCCTGGGCCTaGCATCTGTACTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSGEPWA*HLYSPD
Trigger: ATCTGGAGAGTACAGATGCCAGGCCCAGGGCTCCCC...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CCA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTGGCTCACAGCCTTACTaGGCTTGGCGCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSGSQPY*AWRQGH
Trigger: ATGGCCTTGGCGCCAAGCCCAGTAAGGCTGTGAGCC...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CCA 90 bp ATGTGCACAGGCTGTGTGCTGTCCCATTTGGCAGCACACTGCAGTAGCCCCACCGAGAACAACTCTGAATaGAGAGGGCTCAGGTTATAT +
Preference number: 4 (lower is better)
Translates to: MCTGCVLSHLAAHCSSPTENNSE*RGLRLY
Trigger: ATATAACCTGAGCCCTCTCCATTCAGAGTTGTTCTC...GGTGGGGCTACTGCAGTGTGCTGCCAAATGGGACAGCACACAGCCTGTGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp AGGGAGGTTCTGCAGGCAGGAAGTGTGCTGGGATGCCACACAAGCAAACAGCCCTTTTGTTTTCTGTGGTaGGTAGAAGCGAAATCCCTT +
Preference number: 4 (lower is better)
Translates to: REVLQAGSVLGCHTSKQPFCFLW*VEAKSL
Trigger: AAGGGATTTCGCTTCTACTCACCACAGAAAACAAAA...GGGCTGTTTGCTTGTGTGGCATCCCAGCACACTTCCTGCCTGCAGAACCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp GCTGGGAAACATCAGATTCCTGGAACCATACCACAAAGGATCCGAGACTTTCACCACGGGAACAGTGACTaGGAGGCTCACAGCCTTACT +
Preference number: 4 (lower is better)
Translates to: AGKHQIPGTIPQRIRDFHHGNSD*EAHSLT
Trigger: AGTAAGGCTGTGAGCCTCTCAGTCACTGTTCCCGTG...GTGAAAGTCTCGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGACAGGTGGAGGAGTGTaGAATGCAGCCCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: IFQFASESRKTYVPAQSRTGGGV*NAAPVG
Trigger: CCCCACGGGGGCTGCATTTCACACTCCTCCACCTGT...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp AGCTACTTTCCGCTTCCCAGGGTGGCTGATGAAAGCCAACATGTCACAGAGAAGCTCCTGGCCTTGACTTaGTGGGTTACTTCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: SYFPLPRVADESQHVTEKLLALT*WVTSVR
Trigger: CCTAACAGAAGTAACCCAGCAAGTCAAGGCCAGGAG...CTTCTCTGTGACATGTTGGCTTTCATCAGCCACCCTGGGAAGCGGAAAGTAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCCTCAGCAACAGCAGCTaGTGGTGCTGTGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KPWFRWSELPMPLEGFYFLSNSS*WCCGQR
Trigger: CCTTTGGCCACAGCACCACCAGCTGCTGTTGCTGAG...GAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp GATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTGGAACCATACCACATCTCAGATGTGCTGCTaGTGGGCAGGGCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: DHLQEDCWETSDSWNHTTSQMCC*WAGPTH
Trigger: GTGAGTGGGCCCTGCCCACCAGCAGCACATCTGAGA...TGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp GTCTTATTTGCATTTTTAGTGAGGTGCTTTGATCATCTTCAAGAAGACTGCTGGAGTGCACAGGGCTACTaGGAGGGGAGCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VLFAFLVRCFDHLQEDCWSAQGY*EGSPGP
Trigger: AGGCCCAGGGCTCCCCTCTCAGTAGCCCTGTGCACT...CCAGCAGTCTTCTTGAAGATGATCAAAGCACCTCACTAAAAATGCAAATAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGTCGGGCTGTCAGATATaGCGCTGTAAGGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWSGCQI*RCKALL
Trigger: CAACAATGCCTTACAGCGTCATATCTGACAGCCCGA...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTAGAGTGAGGACAGGATaGGATGCAGGGATCTGCACC +
Preference number: 4 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSRVRTG*DAGICT
Trigger: GGTGCAGATCCCTGCATCTCATCCTGTCCTCACTCT...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp AGACTCAAGAGTAGAGGCTTGTTAGAAGTCAATGAGAGAAGAATCCGGACAAGACCTTTCACAGCGGACTaGCTTGTGCCTCAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RLKSRGLLEVNERRIRTRPFTAD*LVPQGD
Trigger: GTCCCCCTGAGGCACAAGTCAGTCCGCTGTGAAAGG...TCTTGTCCGGATTCTTCTCTCATTGACTTCTAACAAGCCTCTACTCTTGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp ACTTGGAAGCATGAAAAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGTCGCGGTCAGCCCTGTaGTATAAAGTGTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: TWKHEKPWFRWSELPMPLSRSAL*YKVSLS
Trigger: AGACAGTGACACTTTATATCACAGGGCTGACCGCGA...CAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTTTTCATGCTTCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp AGCTACTTTCCGCTTCCCAGGGTGGCTGATGAAAGCCAACATGTCACAGAGAAGGTAGACACTGACACATaGGCAGGAGAGAAGTTACCT +
Preference number: 4 (lower is better)
Translates to: SYFPLPRVADESQHVTEKVDTDT*AGEKLP
Trigger: AGGTAACTTCTCTCCTGCTCATGTGTCAGTGTCTAC...CTTCTCTGTGACATGTTGGCTTTCATCAGCCACCCTGGGAAGCGGAAAGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp AGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAAATGGGCAGGTAGACACTaGCACATGAGCAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SELPMPLEGFYFRAVGLKWAGRH*HMSRRE
Trigger: TTCTCTCCTGCTCATGTGTCAGTGTCTACCTGCCCA...TTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTTTGGGACTTGGTGTATaGAAGCCACTTACTTGGGCA +
Preference number: 4 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLLGLGV*KPLTWA
Trigger: TGCCCAAGTAAGTGGCTTTCATACACCAAGTCCCAA...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp AGCTACTTTCCGCTTCCCAGGGTGGCTGATGAAAGCCAACATGTCACAGAGAAGCTAAATTTCCTCTTTTaGGCCTGGTGCCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: SYFPLPRVADESQHVTEKLNFLF*AWCLHL
Trigger: AAGGTGGAGGCACCAGGCTCAAAAGAGGAAATTTAG...CTTCTCTGTGACATGTTGGCTTTCATCAGCCACCCTGGGAAGCGGAAAGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp GAGGAGTGTGAAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCAACCTTACTCTCCCAATaGGAAATTCTAAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: EECEMQPPWGDPSHVPCATLLSQ*EILNFL
Trigger: GAGGAAATTTAGAATTTCTCATTGGGAGAGTAAGGT...TGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTTCACACTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATGGGCCTGGGTGTCCTTaGAAACTGTCCACTGACAGG +
Preference number: 4 (lower is better)
Translates to: FTKVFDESNMQPGLRASHGPGCP*KLSTDR
Trigger: CCTGTCAGTGGACAGTTTGCAAGGACACCCAGGCCC...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR GCA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGGAGGACAGGATGAGATaGAGGGATCTGCACCTGTAT +
Preference number: 4 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWEDRMR*RDLHLY
Trigger: ATACAGGTGCAGATCCCTGCATCTCATCCTGTCCTC...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR GCA 90 bp AGAATCCGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACATATGCTCCAGCGGACTGACTTGTaGCTCAGGGGGACACCCTCA +
Preference number: 4 (lower is better)
Translates to: RIRTRNSLILSTAEKHMLQRTDL*LRGTPS
Trigger: TGAGGGTGTCCCCCTGAGGCACAAGTCAGTCCGCTG...GAGCATATGTTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCGGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR GCA 90 bp AGGTGCTTTGATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTGGAACGTGTCACCATCTCACTaGGCTGGGCCTCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: RCFDHLQEDCWETSDSWNVSPSH*AGPPDH
Trigger: ATGGTCTGGAGGCCCAGCGCAGTGAGATGGTGACAC...GTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATCAAAGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR GCA 90 bp ACTTGGAAGCATGAAAAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGTTAGTGTACACTGGTTaGAGCTCTTCCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TWKHEKPWFRWSELPMPLLVYTG*SSSQAG
Trigger: ACCAGCCTGGGAAGAGCTGCAACCAGTGTACACTAA...CAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTTTTCATGCTTCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp AGAATCCGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACATATGCTCGTCAGTTCTCAGATGTaGTGCTGGTGGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RIRTRNSLILSTAEKHMLVSSQM*CWWAGP
Trigger: GGGCCCTGCCCACCAGCAGCACATCTGAGAACTGAC...GAGCATATGTTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCGGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CCA 90 bp AGAATCCGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACATATGCTCGGCTCACAGCCTTACTaGGCTTGGCGCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RIRTRNSLILSTAEKHMLGSQPY*AWRQGH
Trigger: ATGGCCTTGGCGCCAAGCCCAGTAAGGCTGTGAGCC...GAGCATATGTTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCGGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CCA 90 bp GGAACAGAACATCCCATTGCTCAGAGATGGGAGAACAACTCTGAATGGAGAGGGGATGGGGCGAGACACTaGAACAGTGACAAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: GTEHPIAQRWENNSEWRGDGARH*NSDKKA
Trigger: AGCCTTTTTGTCACTGTTCCAGTGTCTCGCCCCATC...CCCTCTCCATTCAGAGTTGTTCTCCCATCTCTGAGCAATGGGATGTTCTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp GCTGGGAAACATCAGATTCCTGGAACCATACCACAAAGGATCCGAGACTTTCACAGGCAGGAAGTGTGCTaGGATGCCACACAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: AGKHQIPGTIPQRIRDFHRQEVC*DATQAN
Trigger: GTTTGCTTGTGTGGCATCCCAGCACACTTCCTGCCT...GTGAAAGTCTCGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
3UTR CAA 72 bp AAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTaGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: KPWFRWSELPMP*EGFYFRAVGLK
Trigger: TTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CAAAGGCCAGTAGATATGGTCTGGGGCAGCCTAAATCTTCCCACTTCAATGCTGTCCAAGGAGCACATCTaGGAAGCTGTGCTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: QRPVDMVWGSLNLPTSMLSKEHI*EAVLSK
Trigger: TTTTGAGAGCACAGCTTCTCAGATGTGCTCCTTGGA...CAGCATTGAAGTGGGAAGATTTAGGCTGCCCCAGACCATATCTACTGGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp GTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTTCTCCGGAAACCGGGGTTaGCGCCACCTTAACTTCAGA +
Preference number: 4 (lower is better)
Translates to: VSFSPYASKLKTQEEPFFSGNRG*RHLNFR
Trigger: TCTGAAGTTAAGGTGGCGTCAACCCCGGTTTCCGGA...GAAAAATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp AGCTACTTTCCGCTTCCCAGGGTGGCTGATGAAAGCCAACATGTCACAGAGAAGCAGGCTGATGACAATTaGGAAATGCATCCACCCAAA +
Preference number: 4 (lower is better)
Translates to: SYFPLPRVADESQHVTEKQADDN*EMHPPK
Trigger: TTTGGGTGGATGCATTTCTCAATTGTCATCAGCCTG...CTTCTCTGTGACATGTTGGCTTTCATCAGCCACCCTGGGAAGCGGAAAGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp GGAACAGAACATCCCATTGCTCAGAGATGGGAGAACAACTCTGAATGGAGAGGGAAGCACATGAAAGTGTaGGAAGCCCTTCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GTEHPIAQRWENNSEWRGKHMKV*EALPLA
Trigger: AGCAAGAGGAAGGGCTTCTCACACTTTCATGTGCTT...CCCTCTCCATTCAGAGTTGTTCTCCCATCTCTGAGCAATGGGATGTTCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CATAGTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTGTCTGGTTTCCTCCTTaGAAGGTTGGGGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HSFFQSICQQAQDPRRAIVWFPP*KVGAAE
Trigger: CTCTGCTGCCCCAACCTTTCAAGGAGGAAACCAGAC...AATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp ACTTGGAAGCATGAAAAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAAGAAAAATCCAAGTaGACAGGGCTACTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TWKHEKPWFRWSELPMPLEEKSK*TGLLRG
Trigger: CCCTCTCAGTAGCCCTGTGCACTTGGATTTTTCTTC...CAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTTTTCATGCTTCCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp CATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTGAGCTGTTAGCTGTAAGGCATTGTTaGTGCCTTACACCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: HPPKAGTLCRSLGAPELLAVRHC*CLTPVE
Trigger: TTCTACTGGTGTAAGGCAGCAACAATGCCTTACAGC...TAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGGTGTCACCATCTCACTaGGCTGGGCCTCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: IFQFASESRKTYVPAQSRVSPSH*AGPPDH
Trigger: ATGGTCTGGAGGCCCAGCGCAGTGAGATGGTGACAC...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp CAAAGGCCAGTAGATATGGTCTGGGGCAGCCTAAATCTTCCCACTTCAATGCTGTGTAGTGATGACAAATaGCTCCAGCCTTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QRPVDMVWGSLNLPTSMLCSDDK*LQPCPL
Trigger: CAGAGGACAAGGCTGGAGGCATTTGTCATCACTACA...CAGCATTGAAGTGGGAAGATTTAGGCTGCCCCAGACCATATCTACTGGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp ACAGACTGGACGGGGTCCACCCACATTAGGGTGGAGTTTGTTCTGCCACTGTGCGGAATGCATTTCTCTTaGTCCACGTCTATTTTAGTT +
Preference number: 4 (lower is better)
Translates to: TDWTGSTHIRVEFVLPLCGMHFS*STSILV
Trigger: AACTAAAATAGACGTGGAGCAAGAGAAATGCATTCC...GCACAGTGGCAGAACAAACTCCACCCTAATGTGGGTGGACCCCGTCCAGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp ACTGCTGGGAAACATCAGATTCCTGGAACCATACCACAAAGGATCCGAGACTTTCAGGGCCCACTCACCTaGAACTTTCAGTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: TAGKHQIPGTIPQRIRDFQGPLT*NFQCHH
Trigger: ATGGTGACACTGAAAGTTGCAGGTGAGTGGGCCCTG...AAAGTCTCGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR GCA 90 bp GATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTGGAACCATACCACATGCAGGCAGGAAGTGTaGTGGGATGCCACACAAGCA +
Preference number: 4 (lower is better)
Translates to: DHLQEDCWETSDSWNHTTCRQEV*WDATQA
Trigger: TGCTTGTGTGGCATCCCAGCACACTTCCTGCCTGCA...TGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CCA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGCACATGGCAGTAATCTaGAAATTCGGGGAGAGACTC +
Preference number: 4 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWHMAVI*KFGERL
Trigger: GAGTCTCTCCCCGAATTTCCAGATTACTGCCATGTG...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CCA 90 bp CATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTGAGCTGTTAAGGATGGGAAGAACTTaGGACTTGGTGTATGAAAGC +
Preference number: 4 (lower is better)
Translates to: HPPKAGTLCRSLGAPELLRMGRT*DLVYES
Trigger: GCTTTCATACACCAAGTCCCAAGTTCTTCCCATCCT...TAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CAA 72 bp CTTATGTCCCAGCCCAAAGCAGGAGTTCCCCCTTACTaGAGGAAGAATAAGCCCTTTTGTTACATTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LMSQPKAGVPPY*RKNKPFCYIQA
Trigger: GGCCTGAATGTAACAAAAGGGCTTATTCTTCCTCAAGTAAGGGGGAACTCCTGCTTTGGGCTGGGACATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
3UTR CAA 72 bp TTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTaGGTATTGAGTGCACTGCAAAGTCTAAGACTAACT +
Preference number: 4 (lower is better)
Translates to: FPRRSKSGPPLS*VLSALQSLRLT
Trigger: AGTTAGTCTTAGACTTTGCAGTGCACTCAATACCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATTTGCAAACTGTCCACTaGCAGGAGCCAGGACCAGTA +
Preference number: 4 (lower is better)
Translates to: FTKVFDESNMQPGLRASHLQTVH*QEPGPV
Trigger: TACTGGTCCTGGCTCCTGTCAGTGGACAGTTTGCAA...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp GATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTGGAACCATACCACATTGCAAACTGTCCACTaGCAGGAGCCAGGACCAGTA +
Preference number: 4 (lower is better)
Translates to: DHLQEDCWETSDSWNHTTLQTVH*QEPGPV
Trigger: TACTGGTCCTGGCTCCTGTCAGTGGACAGTTTGCAA...TGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp CAAAGGCCAGTAGATATGGTCTGGGGCAGCCTAAATCTTCCCACTTCAATGCTGCAGTCAAATAGTAATTaGGCACCTCCTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QRPVDMVWGSLNLPTSMLQSNSN*APPVFQ
Trigger: CTGGAACACAGGAGGTGCTCAATTACTATTTGACTG...CAGCATTGAAGTGGGAAGATTTAGGCTGCCCCAGACCATATCTACTGGCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp CATAGTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTACAGTCAGGACACTaGACACCAGCTCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: HSFFQSICQQAQDPRRAILQSGH*TPAPRS
Trigger: GCTCCTTGGAGCTGGTGTGCAGTGTCCTGACTGTAA...AATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp CGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACATATGCTCAGAATTGGGCCTGGGTGTCCTTaGAAACTGTCCACTGACAGG +
Preference number: 4 (lower is better)
Translates to: RTRNSLILSTAEKHMLRIGPGCP*KLSTDR
Trigger: CCTGTCAGTGGACAGTTTGCAAGGACACCCAGGCCC...AATTCTGAGCATATGTTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR GCA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGTCCAGTACAGCGATATaGACCATTGTCCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWSSTAI*TIVLET
Trigger: TGTCTCAAGGACAATGGTGCATATCGCTGTACTGGA...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR GCA 90 bp CAATTGAGAAATGCATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCGTAAGGCATTGTTGCTaGCTTACACCAGTAGAACCC +
Preference number: 4 (lower is better)
Translates to: QLRNASTQSRNSVSEFRSVRHCC*LTPVEP
Trigger: GGGTTCTACTGGTGTAAGGCAGCAACAATGCCTTAC...GCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATGCATTTCTCAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp ACACTGAGTAGGCACAGGGATGTTGTGAAGACCAAGATGGATGCAGTTCTGTTCGTAAGGCATTGTTGCTaGCTTACACCAGTAGAACCC +
Preference number: 4 (lower is better)
Translates to: TLSRHRDVVKTKMDAVLFVRHCC*LTPVEP
Trigger: GGGTTCTACTGGTGTAAGGCAGCAACAATGCCTTAC...GAACAGAACTGCATCCATCTTGGTCTTCACAACATCCCTGTGCCTACTCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR GCA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGGCTGTAAGGCATTGTTaGTGCCTTACACCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWAVRHC*CLTPVE
Trigger: TTCTACTGGTGTAAGGCAGCAACAATGCCTTACAGC...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR GCA 90 bp GTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTTCATCTTCCCACTTCAATaGTGCTTCTCCCCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: VSFSPYASKLKTQEEPFFIFPLQ*CFSPKG
Trigger: CCCCTTGGGGGAGAAGCAGCATTGAAGTGGGAAGAT...GAAAAATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTACACCAGTAGAACCCTaGATCTTTACTCCACATGGC +
Preference number: 4 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSTPVEP*IFTPHG
Trigger: GCCATGTGGAGTAAAGATTCAGGGTTCTACTGGTGT...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp CATAGTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTATGGGAGAACAACTCTaGATGGAGAGGGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: HSFFQSICQQAQDPRRAIMGEQL*MERAQV
Trigger: AACCTGAGCCCTCTCCATTCAGAGTTGTTCTCCCAT...AATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CATAGTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTCGTGAGCTTTGTTGGTaGTGTGACCTCCAGAACAGA +
Preference number: 4 (lower is better)
Translates to: HSFFQSICQQAQDPRRAIRELCW*CDLQNR
Trigger: TCTGTTCTGGAGGTCACATCACCAACAAAGCTCACG...AATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp CAATTGAGAAATGCATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCGAGTTCCCCCTTACTTaGGGAAGAATAAGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: QLRNASTQSRNSVSEFRSEFPLT*GRISPF
Trigger: AAAAGGGCTTATTCTTCCTCAAGTAAGGGGGAACTC...GCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATGCATTTCTCAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp AGAAGAATCCGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACATATGACAAGCAAACAGCCCTaGGGAGCTCTGTGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RRIRTRNSLILSTAEKHMTSKQP*GALWLH
Trigger: ATGGAGCCACAGAGCTCCTCAGGGCTGTTTGCTTGT...CATATGTTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCGGATTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp ACACTGAGTAGGCACAGGGATGTTGTGAAGACCAAGATGGATGCAGTTCTGTTCTGTGAGATTCTGAATTaGATTAGTCTGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TLSRHRDVVKTKMDAVLFCEILN*ISLERG
Trigger: GCCCCTCTCCAGACTAATTCAATTCAGAATCTCACA...GAACAGAACTGCATCCATCTTGGTCTTCACAACATCCCTGTGCCTACTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR GCA 90 bp ATAAGATGTGATGGATATCATAAAAGCGGAACAGAACATCCCATTGCTCAGAGAGGGCCTGGGTGTCCTTaGAAACTGTCCACTGACAGG +
Preference number: 4 (lower is better)
Translates to: IRCDGYHKSGTEHPIAQRGPGCP*KLSTDR
Trigger: CCTGTCAGTGGACAGTTTGCAAGGACACCCAGGCCC...TCTCTGAGCAATGGGATGTTCTGTTCCGCTTTTATGATATCCATCACATCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp CAATTGAGAAATGCATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCGGATTTCCTAGGGAGTaGACTGGATTTTATGCCAGT +
Preference number: 4 (lower is better)
Translates to: QLRNASTQSRNSVSEFRSGFPRE*TGFYAS
Trigger: ACTGGCATAAAATCCAGTGCACTCCCTAGGAAATCC...GCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATGCATTTCTCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp GGAACAGAACATCCCATTGCTCAGAGATGGGAGAACAACTCTGAATGGAGAGGGGGAGTGAGCTTCCAATaGCCTTGGAAGGATTTTATT +
Preference number: 4 (lower is better)
Translates to: GTEHPIAQRWENNSEWRGGVSFQ*PWKDFI
Trigger: AATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCC...CCCTCTCCATTCAGAGTTGTTCTCCCATCTCTGAGCAATGGGATGTTCTGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp GTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTTCCCACCTTCTCAGAACTaGATAGGGCGTGAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: VSFSPYASKLKTQEEPFFPPSQN*IGRELC
Trigger: ACAAAGCTCACGCCCTATGCAGTTCTGAGAAGGTGG...GAAAAATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp GTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTTCCCAGTAGATATGGTCTaGGGCAGCCTAAATCTTCCC +
Preference number: 4 (lower is better)
Translates to: VSFSPYASKLKTQEEPFFPVDMV*GSLNLP
Trigger: GGGAAGATTTAGGCTGCCCCAGACCATATCTACTGG...GAAAAATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCGTGCAGTTATCATTCTaGGATGGGGGTACCTTACTC +
Preference number: 4 (lower is better)
Translates to: KPWFRWSELPMPLEGFYFVQLSF*DGGTLL
Trigger: GAGTAAGGTACCCCCATCCCAGAATGATAACTGCAC...GAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp AGACTCAAGAGTAGAGGCTTGTTAGAAGTCAATGAGAGAAGAATCCGGACAAGATCGGGCTGTCAGATATaGCGCTGTAAGGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: RLKSRGLLEVNERRIRTRSGCQI*RCKALL
Trigger: CAACAATGCCTTACAGCGTCATATCTGACAGCCCGA...TCTTGTCCGGATTCTTCTCTCATTGACTTCTAACAAGCCTCTACTCTTGAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp AATGTAAGGAACATTTACATCCCCAGTAATGAAAGAGACTCAAGAGTAGAGGCTAGAGTGAGGACAGGATaGGATGCAGGGATCTGCACC +
Preference number: 4 (lower is better)
Translates to: NVRNIYIPSNERDSRVEARVRTG*DAGICT
Trigger: GGTGCAGATCCCTGCATCTCATCCTGTCCTCACTCT...AGCCTCTACTCTTGAGTCTCTTTCATTACTGGGGATGTAAATGTTCCTTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGAACAGCAACCACAGCTaGAGCCCACTAAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: IFQFASESRKTYVPAQSRNSNHS*SPLRNP
Trigger: TGGATTCCTTAGTGGGCTTCAGCTGTGGTTGCTGTT...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGGCTTTGTTGGTGATGTaGCCTCCAGAACAGACTGTG +
Preference number: 4 (lower is better)
Translates to: IFQFASESRKTYVPAQSRALLVM*PPEQTV
Trigger: CACAGTCTGTTCTGGAGGTCACATCACCAACAAAGC...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp GGGAAACATCAGATTCCTGGAACCATACCACAAAGGATCCGAGACTTTCACAGGCTTGTTAGAAGTCAATaGGAGAAGAATCCGGACAAG +
Preference number: 4 (lower is better)
Translates to: GKHQIPGTIPQRIRDFHRLVRSQ*EKNPDK
Trigger: CTTGTCCGGATTCTTCTCTCATTGACTTCTAACAAG...CCTGTGAAAGTCTCGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGCCATCTGTGAGATTCTaGATTGAATTAGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWPSVRF*IELVWR
Trigger: TCTCCAGACTAATTCAATTCAGAATCTCACAGATGG...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR GCA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGGAGGACAGGATGAGATaGAGGGATCTGCACCTGTAT +
Preference number: 4 (lower is better)
Translates to: IFQFASESRKTYVPAQSREDRMR*RDLHLY
Trigger: ATACAGGTGCAGATCCCTGCATCTCATCCTGTCCTC...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp GAGAGAAGAATCCGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACATGAGGACAGGATGAGATaGAGGGATCTGCACCTGTAT +
Preference number: 4 (lower is better)
Translates to: ERRIRTRNSLILSTAEKHEDRMR*RDLHLY
Trigger: ATACAGGTGCAGATCCCTGCATCTCATCCTGTCCTC...ATGTTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCGGATTCTTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR GCA 90 bp AATGAGAGAAGAATCCGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAAGGCTCCATTTTCAGCTaGAGGGAGAACAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: NERRIRTRNSLILSTAEKGSIFS*RENRHS
Trigger: ACTGTGCCTGTTCTCCCTGCAGCTGAAAATGGAGCC...TTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCGGATTCTTCTCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR GCA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGCTCTTTGGTATTGAGTaGACTGCAAAGTCTAAGACT +
Preference number: 4 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWLFGIE*TAKSKT
Trigger: AGTCTTAGACTTTGCAGTGCACTCAATACCAAAGAG...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CCA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGTTCCCAAGGTACCGATaGTACCATTTTGTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWFPRYR*YHFVFC
Trigger: ACAGAAAACAAAATGGTACCATCGGTACCTTGGGAA...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CCA 90 bp CAATTGAGAAATGCATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCCACTGGACGTGTAAATaGCTCTTGGACTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: QLRNASTQSRNSVSEFRSHWTCK*LLDLDF
Trigger: AAAATCCAAGTCCAAGAGCCATTTACACGTCCAGTG...GCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATGCATTTCTCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp GACTGCTGGGAAACATCAGATTCCTGGAACCATACCACAAAGGATCCGAGACTTCACTGGACGTGTAAATaGCTCTTGGACTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: DCWETSDSWNHTTKDPRLHWTCK*LLDLDF
Trigger: AAAATCCAAGTCCAAGAGCCATTTACACGTCCAGTG...AAGTCTCGGATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CCA 90 bp CATAGTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTCACATGGCAGTAATCTaGAAATTCGGGGAGAGACTC +
Preference number: 4 (lower is better)
Translates to: HSFFQSICQQAQDPRRAIHMAVI*KFGERL
Trigger: GAGTCTCTCCCCGAATTTCCAGATTACTGCCATGTG...AATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AGGTGCTTTGATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTGGAACCACATGGCAGTAATCTaGAAATTCGGGGAGAGACTC +
Preference number: 4 (lower is better)
Translates to: RCFDHLQEDCWETSDSWNHMAVI*KFGERL
Trigger: GAGTCTCTCCCCGAATTTCCAGATTACTGCCATGTG...GTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATCAAAGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CCA 90 bp CATAGTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTGGAGAGAAGTTACCTTaGTGTCAAGTGCCGACCTTA +
Preference number: 4 (lower is better)
Translates to: HSFFQSICQQAQDPRRAIGEKLP*CQVPTL
Trigger: TAAGGTCGGCACTTGACACCAAGGTAACTTCTCTCC...AATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp GTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTTCCTGGCCTTGACTTGCTaGGTTACTTCTGTTAGGATG +
Preference number: 4 (lower is better)
Translates to: VSFSPYASKLKTQEEPFFLALTC*VTSVRM
Trigger: CATCCTAACAGAAGTAACCCAGCAAGTCAAGGCCAG...GAAAAATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp CATAGTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTCCCATTGCTCAGAGATaGGAGAACAACTCTGAATGG +
Preference number: 4 (lower is better)
Translates to: HSFFQSICQQAQDPRRAIPIAQR*ENNSEW
Trigger: CCATTCAGAGTTGTTCTCCCATCTCTGAGCAATGGG...AATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAAATTTATTTCAGGGCCGTaGGGCTTAAAAGTCATCACT +
Preference number: 4 (lower is better)
Translates to: SELPMPLEGFYFRAVGLKFISGP*GLKVIT
Trigger: AGTGATGACTTTTAAGCCCCACGGCCCTGAAATAAA...TTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp GTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTTCGTTATCATTCTGGGATaGGGGTACCTTACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VSFSPYASKLKTQEEPFFVIILG*GYLTLP
Trigger: TGGGAGAGTAAGGTACCCCCATCCCAGAATGATAAC...GAAAAATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGAAATTGGCGTACTGTTaGAACATACAAGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWKLAYC*NIQGMR
Trigger: CCTCATTCCTTGTATGTTCCAACAGTACGCCAATTT...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTACTCTCCAGATTCCTaGACCTCAAGGATATTGTCT +
Preference number: 4 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSYSPDS*TSRILS
Trigger: AGACAATATCCTTGAGGTTCAGGAATCTGGAGAGTA...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGACACCAGTAGAACCCTaGATCTTTACTCCACATGGC +
Preference number: 4 (lower is better)
Translates to: IFQFASESRKTYVPAQSRTPVEP*IFTPHG
Trigger: GCCATGTGGAGTAAAGATTCAGGGTTCTACTGGTGT...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp AGAATCCGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACATATGCTCACACCAGTAGAACCCTaGATCTTTACTCCACATGGC +
Preference number: 4 (lower is better)
Translates to: RIRTRNSLILSTAEKHMLTPVEP*IFTPHG
Trigger: GCCATGTGGAGTAAAGATTCAGGGTTCTACTGGTGT...GAGCATATGTTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCGGATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp AAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCTCTACGCAGACCCACTaGATCAGTATCTGTATTTTC +
Preference number: 4 (lower is better)
Translates to: KPWFRWSELPMPLEGFYFSTQTH*ISICIF
Trigger: GAAAATACAGATACTGATTCAGTGGGTCTGCGTAGA...GAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp ACACTGAGTAGGCACAGGGATGTTGTGAAGACCAAGATGGATGCAGTTCTGTTCGCATTCTCAGTTTCCTaGATCCCTGTATTTTTGACA +
Preference number: 4 (lower is better)
Translates to: TLSRHRDVVKTKMDAVLFAFSVS*IPVFLT
Trigger: TGTCAAAAATACAGGGATTCAGGAAACTGAGAATGC...GAACAGAACTGCATCCATCTTGGTCTTCACAACATCCCTGTGCCTACTCAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR GCA 90 bp GATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTGGAACCATACCACATCCAGTACAGCGATATaGACCATTGTCCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: DHLQEDCWETSDSWNHTTSSTAI*TIVLET
Trigger: TGTCTCAAGGACAATGGTGCATATCGCTGTACTGGA...TGTGGTATGGTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR GCA 90 bp AGAAGAATCCGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACATATGGATATTGTGTCACTGTaGTGGGCCACTAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: RRIRTRNSLILSTAEKHMDIVSL*WATRPL
Trigger: CAATGGCCTAGTGGCCCAGCACAGTGACACAATATC...CATATGTTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCGGATTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR GCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATCCTAACATCTATGCTTaGGCCACCCAAAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: FTKVFDESNMQPGLRASHPNIYA*ATQRIH
Trigger: GTGAATTCTTTGGGTGGCGCAAGCATAGATGTTAGG...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CCA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTCACTGGACGTGTAAATaGCTCTTGGACTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSHWTCK*LLDLDF
Trigger: AAAATCCAAGTCCAAGAGCCATTTACACGTCCAGTG...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATAAACAGGTTTGGACTTaGTCTTACAGTCAGGACACT +
Preference number: 4 (lower is better)
Translates to: FTKVFDESNMQPGLRASHKQVWT*SYSQDT
Trigger: AGTGTCCTGACTGTAAGATCAAGTCCAAACCTGTTT...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp AGGTGCTTTGATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTGGAACAAACAGGTTTGGACTTaGTCTTACAGTCAGGACACT +
Preference number: 4 (lower is better)
Translates to: RCFDHLQEDCWETSDSWNKQVWT*SYSQDT
Trigger: AGTGTCCTGACTGTAAGATCAAGTCCAAACCTGTTT...GTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATCAAAGCACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp AGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAAAGATTTTATGCCAGTTTaGTTACCCACAGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SELPMPLEGFYFRAVGLKDFMPV*LPTVFF
Trigger: GAAGAAAACTGTGGGTAATCAAACTGGCATAAAATC...TTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR TCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATATTACAAATGTTGACTaGGGACCTACTGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: FTKVFDESNMQPGLRASHITNVD*GPTVCQ
Trigger: TTGGCACACAGTAGGTCCTCAGTCAACATTTGTAAT...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATTTGTTCTCTCCTATGTaGCTCTACAGGCTACTAGTT +
Preference number: 4 (lower is better)
Translates to: FTKVFDESNMQPGLRASHLFSPM*LYRLLV
Trigger: AACTAGTAGCCTGTAGAGTCACATAGGAGAGAACAA...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR GCA 90 bp ATAAGATGTGATGGATATCATAAAAGCGGAACAGAACATCCCATTGCTCAGAGAGATATTGTGTCACTGTaGTGGGCCACTAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: IRCDGYHKSGTEHPIAQRDIVSL*WATRPL
Trigger: CAATGGCCTAGTGGCCCAGCACAGTGACACAATATC...TCTCTGAGCAATGGGATGTTCTGTTCCGCTTTTATGATATCCATCACATCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp ATTTTTCAGTTTGCGTCTGAAAGCAGAAAAACTTATGTCCCAGCCCAAAGCAGGTTCTTTCAGTCCATATaGCAGCAAGCTCAAGACCCA +
Preference number: 4 (lower is better)
Translates to: IFQFASESRKTYVPAQSRFFQSI*QQAQDP
Trigger: TGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAA...CCTGCTTTGGGCTGGGACATAAGTTTTTCTGCTTTCAGACGCAAACTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AGACTCAAGAGTAGAGGCTTGTTAGAAGTCAATGAGAGAAGAATCCGGACAAGACTTCAAGAAGACTGCTaGGAAACATCAGATTCCTGG +
Preference number: 4 (lower is better)
Translates to: RLKSRGLLEVNERRIRTRLQEDC*ETSDSW
Trigger: CCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAG...TCTTGTCCGGATTCTTCTCTCATTGACTTCTAACAAGCCTCTACTCTTGAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATTTTTGTTTTCTGTGGTaGGTAGAAGCGAAATCCCTT +
Preference number: 4 (lower is better)
Translates to: FTKVFDESNMQPGLRASHFCFLW*VEAKSL
Trigger: AAGGGATTTCGCTTCTACTCACCACAGAAAACAAAA...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR TCA 90 bp GTCTTATTTGCATTTTTAGTGAGGTGCTTTGATCATCTTCAAGAAGACTGCTGGGAGACACTGGAACAGTaGCAAAAAGGCTCACCACTT +
Preference number: 4 (lower is better)
Translates to: VLFAFLVRCFDHLQEDCWETLEQ*QKGSPL
Trigger: AAGTGGTGAGCCTTTTTGTCACTGTTCCAGTGTCTC...CCAGCAGTCTTCTTGAAGATGATCAAAGCACCTCACTAAAAATGCAAATAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp AAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCTCTTTTTCTCTTGGATaGTCCGTACTTCTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: KPWFRWSELPMPLEGFYFSFSLG*SVLLSK
Trigger: TTTACTCAGAAGTACGGATCATCCAAGAGAAAAAGA...GAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp GTCTTATTTGCATTTTTAGTGAGGTGCTTTGATCATCTTCAAGAAGACTGCTGGGTAAGGCATTGTTGCTaGCTTACACCAGTAGAACCC +
Preference number: 4 (lower is better)
Translates to: VLFAFLVRCFDHLQEDCWVRHCC*LTPVEP
Trigger: GGGTTCTACTGGTGTAAGGCAGCAACAATGCCTTAC...CCAGCAGTCTTCTTGAAGATGATCAAAGCACCTCACTAAAAATGCAAATAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR GCA 90 bp AGGTGCTTTGATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTGGAACCGGCAGAGAAACATATaGTCAGAATTCTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: RCFDHLQEDCWETSDSWNRQRNI*SEFFGF
Trigger: GAAACCAAAGAATTCTGAGCATATGTTTCTCTGCCG...GTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATCAAAGCACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CCA 90 bp CATAGTTTCTTTCAGTCCATATGCCAGCAAGCTCAAGACCCAAGAAGAGCCATTTTCCCAAGGTACCGATaGTACCATTTTGTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HSFFQSICQQAQDPRRAIFPRYR*YHFVFC
Trigger: ACAGAAAACAAAATGGTACCATCGGTACCTTGGGAA...AATGGCTCTTCTTGGGTCTTGAGCTTGCTGGCATATGGACTGAAAGAAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTAATGGCTCTTGGACTTaGATTTTGACTGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSNGSWT*ILTVLE
Trigger: TTCCAATACAGTCAAAATCCAAGTCCAAGAGCCATT...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATCGTGTAAATGGCTCTTaGACTTGGATTTTGACTGTA +
Preference number: 4 (lower is better)
Translates to: FTKVFDESNMQPGLRASHRVNGS*TWILTV
Trigger: TACAGTCAAAATCCAAGTCCAAGAGCCATTTACACG...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CCA 90 bp AAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACATATGCTCAGAATTCTTTGGATGGGGCGAGACACTaGAACAGTGACAAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KKQLNPFYGRETYAQNSLDGARH*NSDKKA
Trigger: AGCCTTTTTGTCACTGTTCCAGTGTCTCGCCCCATC...CAAAGAATTCTGAGCATATGTTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp AGACTCAAGAGTAGAGGCTTGTTAGAAGTCAATGAGAGAAGAATCCGGACAAGATTTAGTGAGGTGCTTTaGTCATCTTCAAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: RLKSRGLLEVNERRIRTRFSEVL*SSSRRL
Trigger: CAGTCTTCTTGAAGATGATCAAAGCACCTCACTAAA...TCTTGTCCGGATTCTTCTCTCATTGACTTCTAACAAGCCTCTACTCTTGAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATACCATTTGGCTTCTCTaGAAAGAAAGTAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: FTKVFDESNMQPGLRASHTIWLL*KESKLS
Trigger: GGAAAGTTTACTTTCTTTTCAGAGAAGCCAAATGGT...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CCA 90 bp GAGAGAAGAATCCGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACATTTCCCAAGGTACCGATaGTACCATTTTGTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: ERRIRTRNSLILSTAEKHFPRYR*YHFVFC
Trigger: ACAGAAAACAAAATGGTACCATCGGTACCTTGGGAA...ATGTTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCGGATTCTTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR TCA 90 bp ATAAGATGTGATGGATATCATAAAAGCGGAACAGAACATCCCATTGCTCAGAGATACTCTCCAGATTCCTaGACCTCAAGGATATTGTCT +
Preference number: 4 (lower is better)
Translates to: IRCDGYHKSGTEHPIAQRYSPDS*TSRILS
Trigger: AGACAATATCCTTGAGGTTCAGGAATCTGGAGAGTA...TCTCTGAGCAATGGGATGTTCTGTTCCGCTTTTATGATATCCATCACATCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp AGACTCAAGAGTAGAGGCTTGTTAGAAGTCAATGAGAGAAGAATCCGGACAAGAAATGGCTCTTGGACTTaGATTTTGACTGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: RLKSRGLLEVNERRIRTRNGSWT*ILTVLE
Trigger: TTCCAATACAGTCAAAATCCAAGTCCAAGAGCCATT...TCTTGTCCGGATTCTTCTCTCATTGACTTCTAACAAGCCTCTACTCTTGAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CCA 90 bp AATGAGAGAAGAATCCGGACAAGAAACAGCTTAATCCTTTCTACGGCAGAGAAACGTGTAAATGGCTCTTaGACTTGGATTTTGACTGTA +
Preference number: 4 (lower is better)
Translates to: NERRIRTRNSLILSTAEKRVNGS*TWILTV
Trigger: TACAGTCAAAATCCAAGTCCAAGAGCCATTTACACG...TTTCTCTGCCGTAGAAAGGATTAAGCTGTTTCTTGTCCGGATTCTTCTCTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CCA 90 bp ATAAGATGTGATGGATATCATAAAAGCGGAACAGAACATCCCATTGCTCAGAGAGAAGAACTTGGGACTTaGTGTATGAAAGCCACTTAC +
Preference number: 4 (lower is better)
Translates to: IRCDGYHKSGTEHPIAQREELGT*CMKATY
Trigger: GTAAGTGGCTTTCATACACCAAGTCCCAAGTTCTTC...TCTCTGAGCAATGGGATGTTCTGTTCCGCTTTTATGATATCCATCACATCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp ATAAGATGTGATGGATATCATAAAAGCGGAACAGAACATCCCATTGCTCAGAGATTACTTCTGTTAGGATaGGAAGAACTTGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: IRCDGYHKSGTEHPIAQRLLLLG*EELGTW
Trigger: CCAAGTCCCAAGTTCTTCCCATCCTAACAGAAGTAA...TCTCTGAGCAATGGGATGTTCTGTTCCGCTTTTATGATATCCATCACATCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CCA 90 bp GTCTTATTTGCATTTTTAGTGAGGTGCTTTGATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTaGAACCATACCACAAAGGAT +
Preference number: 4 (lower is better)
Translates to: VLFAFLVRCFDHLQEDCWETSDS*NHTTKD
Trigger: ATCCTTTGTGGTATGGTTCCAGGAATCTGATGTTTC...CCAGCAGTCTTCTTGAAGATGATCAAAGCACCTCACTAAAAATGCAAATAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CCA 90 bp ATAAGATGTGATGGATATCATAAAAGCGGAACAGAACATCCCATTGCTCAGAGAAATGGCTCTTGGACTTaGATTTTGACTGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: IRCDGYHKSGTEHPIAQRNGSWT*ILTVLE
Trigger: TTCCAATACAGTCAAAATCCAAGTCCAAGAGCCATT...TCTCTGAGCAATGGGATGTTCTGTTCCGCTTTTATGATATCCATCACATCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR GCA 90 bp AATGTAAGGAACATTTACATCCCCAGTAATGAAAGAGACTCAAGAGTAGAGGCTGCATTTTTAGTGAGGTaGTTTGATCATCTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: NVRNIYIPSNERDSRVEAAFLVR*FDHLQE
Trigger: TTCTTGAAGATGATCAAAGCACCTCACTAAAAATGC...AGCCTCTACTCTTGAGTCTCTTTCATTACTGGGGATGTAAATGTTCCTTACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CAA 90 bp CAGCACGATCCGTGTGAACCGAGTTGGGCCCTGGGCAGCCAGAGCCACACATTCTCACAGCGGACTGACTaGTGCCTCAGGGGGACACCC +
Preference number: 5 (lower is better)
Translates to: QHDPCEPSWALGSQSHTFSQRTD*CLRGTP
Trigger: GGGTGTCCCCCTGAGGCACAAGTCAGTCCGCTGTGA...GAATGTGTGGCTCTGGCTGCCCAGGGCCCAACTCGGTTCACACGGATCGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp TGGTGGTGCTGTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGATGATAGGGGAACCCTaGTTCCTGAGATGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: WWCCGQRLAREQHDPCEPMIGEP*FLRCLG
Trigger: CCCCAGGCATCTCAGGAACAAGGGTTCCCCTATCAT...CGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp GAGGAGTGTGAAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCATTCCTCCTTGAAAGGTaGGGGCAGCAGAGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: EECEMQPPWGDPSHVPCAFLLER*GQQSQP
Trigger: GGGCTGGCTCTGCTGCCCCAACCTTTCAAGGAGGAA...TGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTTCACACTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS CCA 90 bp TGTACACTGGTTGCAGCTCTTCCCAGGCTGGTACATTGTGATAGGTaGGCTCTTGGGAGTCCGAGTCTGAAGGGCTCCTGGCGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: CTLVAALPRLVHCDR*ALGSPSLKGSWRGQ
Trigger: CTGACCCCGCCAGGAGCCCTTCAGACTCGGACTCCCAAGAGCCCACCTATCACAATGTACCAGCCTGGGAAGAGCTGCAACCAGTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361835.8
ENST00000461387.5
ENST00000497286.5
CDS-3UTR CAA 90 bp GTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGAGTTGGGCCCTCTAAATTTCCTCTTTaGAGCCTGGTGCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: VAKGWPGSSTIRVNRVGPSKFPL*SLVPPP
Trigger: AGGTGGAGGCACCAGGCTCAAAAGAGGAAATTTAGA...GGGCCCAACTCGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS CCA 90 bp GCTGCAGGGAGAACAGGCACAGTCAGTTCTCAGATGTGCTGCTGGTaGGCAGGGCCCACTCACCTGCAACTTTCAGTGTCACCATCTCAC +
Preference number: 5 (lower is better)
Translates to: AAGRTGTVSSQMCCW*AGPTHLQLSVSPSH
Trigger: GTGAGATGGTGACACTGAAAGTTGCAGGTGAGTGGGCCCTGCCCACCAGCAGCACATCTGAGAACTGACTGTGCCTGTTCTCCCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS CCA 90 bp TCAGCTGCAGGGAGAACAGGCACAGTCAGTTCTCAGATGTGCTGCTaGTGGGCAGGGCCCACTCACCTGCAACTTTCAGTGTCACCATCT +
Preference number: 5 (lower is better)
Translates to: SAAGRTGTVSSQMCC*WAGPTHLQLSVSPS
Trigger: AGATGGTGACACTGAAAGTTGCAGGTGAGTGGGCCCTGCCCACCAGCAGCACATCTGAGAACTGACTGTGCCTGTTCTCCCTGCAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CAA 90 bp AAATGCAGCCCCCGTGGGGAGACCCATCACATGTCCCATGTGCACAGGCTGTGTAGGCTGAAACAGCAGTaGGAGAGACGTGTGGACTCA +
Preference number: 5 (lower is better)
Translates to: KCSPRGETHHMSHVHRLCRLKQQ*ERRVDS
Trigger: TGAGTCCACACGTCTCTCCAACTGCTGTTTCAGCCT...ACACAGCCTGTGCACATGGGACATGTGATGGGTCTCCCCACGGGGGCTGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp ATGTGCACAGGCTGTGTGCTGTCCCATTTGGCAGCACACTGCAGTAGCCCCACCTGTCTGGTTTCCTCCTaGAAAGGTTGGGGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: MCTGCVLSHLAAHCSSPTCLVSS*KGWGSR
Trigger: TCTGCTGCCCCAACCTTTCAAGGAGGAAACCAGACA...GGTGGGGCTACTGCAGTGTGCTGCCAAATGGGACAGCACACAGCCTGTGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS GCA 90 bp TTTTCAGCTGCAGGGAGAACAGGCACAGTCAGTTCTCAGATGTGCTaGTGGTGGGCAGGGCCCACTCACCTGCAACTTTCAGTGTCACCA +
Preference number: 5 (lower is better)
Translates to: FSAAGRTGTVSSQMC*WWAGPTHLQLSVSP
Trigger: TGGTGACACTGAAAGTTGCAGGTGAGTGGGCCCTGCCCACCAGCAGCACATCTGAGAACTGACTGTGCCTGTTCTCCCTGCAGCTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS GCA 90 bp CCATTTTCAGCTGCAGGGAGAACAGGCACAGTCAGTTCTCAGATGTaGTGCTGGTGGGCAGGGCCCACTCACCTGCAACTTTCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: PFSAAGRTGTVSSQM*CWWAGPTHLQLSVS
Trigger: TGACACTGAAAGTTGCAGGTGAGTGGGCCCTGCCCACCAGCAGCACATCTGAGAACTGACTGTGCCTGTTCTCCCTGCAGCTGAAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS CCA 90 bp TGTACACTGGTTGCAGCTCTTCCCAGGCTGGTACATTGTGATAGGTaGGCTCTTGGGAGTCCGAGTCTGAAGGGCTCCTGTGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: CTLVAALPRLVHCDR*ALGSPSLKGSCETE
Trigger: CTCTGTCTCACAGGAGCCCTTCAGACTCGGACTCCCAAGAGCCCACCTATCACAATGTACCAGCCTGGGAAGAGCTGCAACCAGTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483875.1
CDS-3UTR CAA 90 bp TGGTGGTGCTGTGGCCAAAGGCTGGCCAGGGAGCAGCACGATCCGTGTGAACCGACGTGTAAATGGCTCTaGGACTTGGATTTTGACTGT +
Preference number: 5 (lower is better)
Translates to: WWCCGQRLAREQHDPCEPTCKWL*DLDFDC
Trigger: ACAGTCAAAATCCAAGTCCAAGAGCCATTTACACGT...CGGTTCACACGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGCACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp ATGTGCACAGGCTGTGTGCTGTCCCATTTGGCAGCACACTGCAGTAGCCCCACCAGGAGAGAAGTTACCTaGGTGTCAAGTGCCGACCTT +
Preference number: 5 (lower is better)
Translates to: MCTGCVLSHLAAHCSSPTRREVT*VSSADL
Trigger: AAGGTCGGCACTTGACACCAAGGTAACTTCTCTCCT...GGTGGGGCTACTGCAGTGTGCTGCCAAATGGGACAGCACACAGCCTGTGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp CATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTGAGCTGTTAAGGCCCACTCTCCCTTaGTGTGGTAAGACCCCCTCT +
Preference number: 5 (lower is better)
Translates to: HPPKAGTLCRSLGAPELLRPTLP*CGKTPS
Trigger: AGAGGGGGTCTTACCACACAAAGGGAGAGTGGGCCT...TAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp CATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTGAGCTGTTACAAATGCCTCCAGCCTaGTCCTCTGCAAGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: HPPKAGTLCRSLGAPELLQMPPA*SSARLH
Trigger: GTGCAGCCTTGCAGAGGACAAGGCTGGAGGCATTTG...TAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS CCA 90 bp CTAAATCTTCCCACTTCAATGCTGCTTCTCCCCCAAGGGGAACTTTaGGGTGCAGAGGCTGAAACAGCAGTTGGAGAGACGTGTGGACTC +
Preference number: 5 (lower is better)
Translates to: LNLPTSMLLLPQGEL*GAEAETAVGETCGL
Trigger: GAGTCCACACGTCTCTCCAACTGCTGTTTCAGCCTCTGCACCCCAAAGTTCCCCTTGGGGGAGAAGCAGCATTGAAGTGGGAAGATTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361835.8
ENST00000461387.5
ENST00000462218.1
ENST00000497286.5
CDS-3UTR CAA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTCACAGCGGACTGACTaGTGCCTCAGGGGGACACCC +
Preference number: 5 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSSQRTD*CLRGTP
Trigger: GGGTGTCCCCCTGAGGCACAAGTCAGTCCGCTGTGA...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS TCA 90 bp ATGCAGGGATCTGCACCTGTATCCAGGATCTCGGGCTGTCAGATATaGCGCTGTAAGGCATTGTTGCTGCCTTACACCAGTAGAACCCTG +
Preference number: 5 (lower is better)
Translates to: MQGSAPVSRISGCQI*RCKALLLPYTSRTL
Trigger: CAGGGTTCTACTGGTGTAAGGCAGCAACAATGCCTTACAGCGTCATATCTGACAGCCCGAGATCCTGGATACAGGTGCAGATCCCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361835.8
ENST00000368189.3
ENST00000368190.7
ENST00000481082.1
CDS-3UTR CAA 90 bp CAAAGGCCAGTAGATATGGTCTGGGGCAGCCTAAATCTTCCCACTTCAATGCTGCTGGTCCTCCTGGCCTaGACTTGCTGGGTTACTTCT +
Preference number: 5 (lower is better)
Translates to: QRPVDMVWGSLNLPTSMLLVLLA*TCWVTS
Trigger: AGAAGTAACCCAGCAAGTCAAGGCCAGGAGGACCAG...CAGCATTGAAGTGGGAAGATTTAGGCTGCCCCAGACCATATCTACTGGCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp CATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTGAGCTGTTACGCTGTAAGGCATTGTaGCTGCCTTACACCAGTAGA +
Preference number: 5 (lower is better)
Translates to: HPPKAGTLCRSLGAPELLRCKAL*LPYTSR
Trigger: TCTACTGGTGTAAGGCAGCAACAATGCCTTACAGCG...TAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp AGACTCAAGAGTAGAGGCTTGTTAGAAGTCAATGAGAGAAGAATCCGGACAAGATCACAGCGGACTGACTaGTGCCTCAGGGGGACACCC +
Preference number: 5 (lower is better)
Translates to: RLKSRGLLEVNERRIRTRSQRTD*CLRGTP
Trigger: GGGTGTCCCCCTGAGGCACAAGTCAGTCCGCTGTGA...TCTTGTCCGGATTCTTCTCTCATTGACTTCTAACAAGCCTCTACTCTTGAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CAA 90 bp AGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAAATGTGTGCTGTCCCATTaGGCAGCACACTGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: SELPMPLEGFYFRAVGLKCVLSH*AAHCSS
Trigger: GCTACTGCAGTGTGCTGCCAAATGGGACAGCACACA...TTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGCGCTGTAAGGCATTGTaGCTGCCTTACACCAGTAGA +
Preference number: 5 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWRCKAL*LPYTSR
Trigger: TCTACTGGTGTAAGGCAGCAACAATGCCTTACAGCG...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CAA 90 bp CAATTGAGAAATGCATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCATTAGTGTACACTGGTaGCAGCTCTTCCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: QLRNASTQSRNSVSEFRSISVHW*QLFPGW
Trigger: CCAGCCTGGGAAGAGCTGCAACCAGTGTACACTAAT...GCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATGCATTTCTCAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp AGCTACTTTCCGCTTCCCAGGGTGGCTGATGAAAGCCAACATGTCACAGAGAAGACATTAGGGTGGAGTTaGTTCTGCCACTGTGCAGTT +
Preference number: 5 (lower is better)
Translates to: SYFPLPRVADESQHVTEKTLGWS*FCHCAV
Trigger: AACTGCACAGTGGCAGAACAAACTCCACCCTAATGT...CTTCTCTGTGACATGTTGGCTTTCATCAGCCACCCTGGGAAGCGGAAAGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTGGAGTTCCCCCTTACTaGAGGAAGAATAAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLGVPPY*RKNKPF
Trigger: AAAGGGCTTATTCTTCCTCAAGTAAGGGGGAACTCC...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp ACACTGAGTAGGCACAGGGATGTTGTGAAGACCAAGATGGATGCAGTTCTGTTCGGACCTCCTCTCTCTTaGGTATTGAGTGCACTGCAA +
Preference number: 5 (lower is better)
Translates to: TLSRHRDVVKTKMDAVLFGPPLS*VLSALQ
Trigger: TTGCAGTGCACTCAATACCAAAGAGAGAGGAGGTCC...GAACAGAACTGCATCCATCTTGGTCTTCACAACATCCCTGTGCCTACTCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS GCA 90 bp CTCAATTCCAAAACAGGTTTGGACTTGATCTTACAGTCAGGACACTaGACACCAGCTCCAAGGAGCACATCTGAGAAGCTGTGCTCTCAA +
Preference number: 5 (lower is better)
Translates to: LNSKTGLDLILQSGH*TPAPRSTSEKLCSQ
Trigger: TTGAGAGCACAGCTTCTCAGATGTGCTCCTTGGAGCTGGTGTGCAGTGTCCTGACTGTAAGATCAAGTCCAAACCTGTTTTGGAATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS CCA 90 bp TCACTCCTAGTGAGTGACTTCTTACTGCAGGGTGGCTGCCAGGCCTaGAAACATGAACAAGTACATAACAAACTGACCATGGGCATTCTA +
Preference number: 5 (lower is better)
Translates to: SLLVSDFLLQGGCQA*KHEQVHNKLTMGIL
Trigger: TAGAATGCCCATGGTCAGTTTGTTATGTACTTGTTCATGTTTCCAGGCCTGGCAGCCACCCTGCAGTAAGAAGTCACTCACTAGGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483875.1
CDS-3UTR CAA 90 bp CATCCACCCAAAGCAGGAACTCTGTGTCGGAGTTTAGGAGCACCTGAGCTGTTAACCGATGGTACCATTTaGTTTTCTGTGGTGAGTAGA +
Preference number: 5 (lower is better)
Translates to: HPPKAGTLCRSLGAPELLTDGTI*FSVVSR
Trigger: TCTACTCACCACAGAAAACAAAATGGTACCATCGGT...TAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTTTGGGTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp ACTTGGAAGCATGAAAAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGGAAGAACTTGGGACTaGGTGTATGAAAGCCACTTA +
Preference number: 5 (lower is better)
Translates to: TWKHEKPWFRWSELPMPLGRTWD*VYESHL
Trigger: TAAGTGGCTTTCATACACCAAGTCCCAAGTTCTTCC...CAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTTTTCATGCTTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp AAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCGAGAAGCCCTTCCTCTaGCTGAACAGTTTCCTCATC +
Preference number: 5 (lower is better)
Translates to: KPWFRWSELPMPLEGFYFEKPFL*LNSFLI
Trigger: GATGAGGAAACTGTTCAGCAAGAGGAAGGGCTTCTC...GAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp ACTTGGAAGCATGAAAAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAGCTTCCAATGCCCTaGGAAGGATTTTATTTCAGG +
Preference number: 5 (lower is better)
Translates to: TWKHEKPWFRWSELPMPLELPMP*EGFYFR
Trigger: CCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTC...CAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTTTTCATGCTTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS TCA 90 bp GTGGCCACAACGGATGAGAAAATGTCATCATGTATCAGACTAATGTaGAGAGTTAGAGAGGACTGTGCTTCAACCTGGCTTTACCCTGGC +
Preference number: 5 (lower is better)
Translates to: VATTDEKMSSCIRLM*RVREDCASTWLYPG
Trigger: GCCAGGGTAAAGCCAGGTTGAAGCACAGTCCTCTCTAACTCTTCACATTAGTCTGATACATGATGACATTTTCTCATCCGTTGTGGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461387.5
CDS-3UTR CAA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGACCGATGGTACCATTTaGTTTTCTGTGGTGAGTAGA +
Preference number: 5 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWTDGTI*FSVVSR
Trigger: TCTACTCACCACAGAAAACAAAATGGTACCATCGGT...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CAA 90 bp AGGTGCTTTGATCATCTTCAAGAAGACTGCTGGGAAACATCAGATTCCTGGAACCGCTGTAAGGCATTGTaGCTGCCTTACACCAGTAGA +
Preference number: 5 (lower is better)
Translates to: RCFDHLQEDCWETSDSWNRCKAL*LPYTSR
Trigger: TCTACTGGTGTAAGGCAGCAACAATGCCTTACAGCG...GTTCCAGGAATCTGATGTTTCCCAGCAGTCTTCTTGAAGATGATCAAAGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CAA 90 bp AAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCGAACAGAACATCCCATaGCTCAGAGATGGGAGAACA +
Preference number: 5 (lower is better)
Translates to: KPWFRWSELPMPLEGFYFEQNIP*LRDGRT
Trigger: TGTTCTCCCATCTCTGAGCAATGGGATGTTCTGTTC...GAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp ACTTGGAAGCATGAAAAGCCATGGTTCAGGTGGAGTGAGCTTCCAATGCCCTTGGGGAATGCATTTCTCTaGCTCCACGTCTATTTTAGT +
Preference number: 5 (lower is better)
Translates to: TWKHEKPWFRWSELPMPLGNAFL*LHVYFS
Trigger: ACTAAAATAGACGTGGAGCAAGAGAAATGCATTCCC...CAAGGGCATTGGAAGCTCACTCCACCTGAACCATGGCTTTTCATGCTTCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGTCCCCTCTTATCATCTaGTCATATCATCTGTCCACT +
Preference number: 5 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWSPLII*SYHLST
Trigger: AGTGGACAGATGATATGACAAGATGATAAGAGGGGA...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS TCA 90 bp AGTAATATCACCCACAGCAGCATGAAGACCTGGACCACCAAGGGCTaGGATCAAAAGAGAAGTTTCCTCAATTCCAAAACAGGTTTGGAC +
Preference number: 5 (lower is better)
Translates to: SNITHSSMKTWTTKG*DQKRSFLNSKTGLD
Trigger: GTCCAAACCTGTTTTGGAATTGAGGAAACTTCTCTTTTGATCTCAGCCCTTGGTGGTCCAGGTCTTCATGCTGCTGTGGGTGATATTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361835.8
ENST00000368189.3
ENST00000368190.7
ENST00000481082.1
CDS-3UTR CAA 90 bp TGGAGTGAGCTTCCAATGCCCTTGGAAGGATTTTATTTCAGGGCCGTGGGGCTTAATTCCAAAACAGGTTaGGACTTGATCTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: WSELPMPLEGFYFRAVGLNSKTG*DLILQS
Trigger: TGACTGTAAGATCAAGTCCAAACCTGTTTTGGAATT...AAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGGCATTGGAAGCTCACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp ACACTGAGTAGGCACAGGGATGTTGTGAAGACCAAGATGGATGCAGTTCTGTTCACGTGTAAATGGCTCTaGGACTTGGATTTTGACTGT +
Preference number: 5 (lower is better)
Translates to: TLSRHRDVVKTKMDAVLFTCKWL*DLDFDC
Trigger: ACAGTCAAAATCCAAGTCCAAGAGCCATTTACACGT...GAACAGAACTGCATCCATCTTGGTCTTCACAACATCCCTGTGCCTACTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CAA 90 bp TTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTTGGAAAATTGGCGTACTGTaGGAACATACAAGGAATGAG +
Preference number: 5 (lower is better)
Translates to: FGYYSSLAGPSLDLLSLWKIGVL*EHTRNE
Trigger: CTCATTCCTTGTATGTTCCAACAGTACGCCAATTTT...CCAAAGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS TCA 90 bp GAGATCAAAAGAGAAGTTTCCTCAATTCCAAAACAGGTTTGGACTTaGTCTTACAGTCAGGACACTGCACACCAGCTCCAAGGAGCACAT +
Preference number: 5 (lower is better)
Translates to: EIKREVSSIPKQVWT*SYSQDTAHQLQGAH
Trigger: ATGTGCTCCTTGGAGCTGGTGTGCAGTGTCCTGACTGTAAGATCAAGTCCAAACCTGTTTTGGAATTGAGGAAACTTCTCTTTTGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp CAAAGGCCAGTAGATATGGTCTGGGGCAGCCTAAATCTTCCCACTTCAATGCTGGGATTTTATGCCAGTTaGATTACCCACAGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: QRPVDMVWGSLNLPTSMLGFYAS*ITHSFL
Trigger: AAGAAAACTGTGGGTAATCAAACTGGCATAAAATCC...CAGCATTGAAGTGGGAAGATTTAGGCTGCCCCAGACCATATCTACTGGCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS-3UTR CAA 90 bp ACACTGAGTAGGCACAGGGATGTTGTGAAGACCAAGATGGATGCAGTTCTGTTCAATTCCAAAACAGGTTaGGACTTGATCTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: TLSRHRDVVKTKMDAVLFNSKTG*DLILQS
Trigger: TGACTGTAAGATCAAGTCCAAACCTGTTTTGGAATT...GAACAGAACTGCATCCATCTTGGTCTTCACAACATCCCTGTGCCTACTCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CAA 90 bp AATTTTCGGTTATTATTCTTCCCTCGCAGGTCCAAGTCTGGACCTCCTCTCTCTTCGTACACATACAATTaGCACACGTTTCTTGAATGT +
Preference number: 5 (lower is better)
Translates to: NFRLLFFPRRSKSGPPLSSYTYN*HTFLEC
Trigger: ACATTCAAGAAACGTGTGCAAATTGTATGTGTACGA...AGAGAGAGGAGGTCCAGACTTGGACCTGCGAGGGAAGAATAATAACCGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CAA 90 bp TTTACAAAGGTCTTTGACGAGTCTAATATGCAGCCAGGGTTGAGAGCCAGTCATACTAAATTACAAATGTaGACTGAGGACCTACTGTGT +
Preference number: 5 (lower is better)
Translates to: FTKVFDESNMQPGLRASHTKLQM*TEDLLC
Trigger: ACACAGTAGGTCCTCAGTCAACATTTGTAATTTAGT...ATGACTGGCTCTCAACCCTGGCTGCATATTAGACTCGTCAAAGACCTTTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368189.3
CDS-3UTR CAA 90 bp GTCTTATTTGCATTTTTAGTGAGGTGCTTTGATCATCTTCAAGAAGACTGCTGGACGTGTAAATGGCTCTaGGACTTGGATTTTGACTGT +
Preference number: 5 (lower is better)
Translates to: VLFAFLVRCFDHLQEDCWTCKWL*DLDFDC
Trigger: ACAGTCAAAATCCAAGTCCAAGAGCCATTTACACGT...CCAGCAGTCTTCTTGAAGATGATCAAAGCACCTCACTAAAAATGCAAATAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS-3UTR CAA 90 bp GTCTTATTTGCATTTTTAGTGAGGTGCTTTGATCATCTTCAAGAAGACTGCTGGAATTCCAAAACAGGTTaGGACTTGATCTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: VLFAFLVRCFDHLQEDCWNSKTG*DLILQS
Trigger: TGACTGTAAGATCAAGTCCAAACCTGTTTTGGAATT...CCAGCAGTCTTCTTGAAGATGATCAAAGCACCTCACTAAAAATGCAAATAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS TCA 90 bp AAACAATTAACAGTGGTTATGTCTGGAGAATATGTGCGTAAGAAGTaGTATGAGCAGGTAGAAAGAGACCTTTACTTTTCAATATTGGCC +
Preference number: 5 (lower is better)
Translates to: KQLTVVMSGEYVRKK*YEQVERDLYFSILA
Trigger: GGCCAATATTGAAAAGTAAAGGTCTCTTTCTACCTGCTCATATCACTTCTTACGCACATATTCTCCAGACATAACCACTGTTAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461387.5
CDS GCA 72 bp GCAGGGAGAACAGGCACAGTCAGTTCTCAGATGTGCTaGTGGTGGGCAGGGCCCACTCACCTGCAACTTTCA +
Preference number: 6 (lower is better)
Translates to: AGRTGTVSSQMC*WWAGPTHLQLS
Trigger: TGAAAGTTGCAGGTGAGTGGGCCCTGCCCACCAGCAGCACATCTGAGAACTGACTGTGCCTGTTCTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS CCA 72 bp GTTGCAGCTCTTCCCAGGCTGGTACATTGTGATAGGTaGGCTCTTGGGAGTCCGAGTCTGAAGGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VAALPRLVHCDR*ALGSPSLKGSW
Trigger: CCAGGAGCCCTTCAGACTCGGACTCCCAAGAGCCCACCTATCACAATGTACCAGCCTGGGAAGAGCTGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361835.8
ENST00000461387.5
ENST00000497286.5
CDS CCA 72 bp GGGAGAACAGGCACAGTCAGTTCTCAGATGTGCTGCTaGTGGGCAGGGCCCACTCACCTGCAACTTTCAGTG +
Preference number: 6 (lower is better)
Translates to: GRTGTVSSQMCC*WAGPTHLQLSV
Trigger: CACTGAAAGTTGCAGGTGAGTGGGCCCTGCCCACCAGCAGCACATCTGAGAACTGACTGTGCCTGTTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368190.7
CDS CCA 72 bp GGAAAGAGGAAAGTGTTCAGTTGTGGAAGACTGGCATaGGGCTCTTCCCTTGTGCCTGCGCTGTGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: GKRKVFSCGRLA*GSSLVPALWGQ
Trigger: CTGGCCCCACAGCGCAGGCACAAGGGAAGAGCCCCATGCCAGTCTTCCACAACTGAACACTTTCCTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462218.1
CDS TCA 72 bp CCCAGCGCTTTGAGAGGCCTAGGTGAGCAGATCACTTaGGCCCAGGAGTTCAACATTAGCCTGGGCAGCATG +
Preference number: 6 (lower is better)
Translates to: PSALRGLGEQIT*AQEFNISLGSM
Trigger: CATGCTGCCCAGGCTAATGTTGAACTCCTGGGCTCAAGTGATCTGCTCACCTAGGCCTCTCAAAGCGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481082.1
CDS CCA 72 bp GTTGCAGCTCTTCCCAGGCTGGTACATTGTGATAGGTaGGCTCTTGGGAGTCCGAGTCTGAAGGGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: VAALPRLVHCDR*ALGSPSLKGSC
Trigger: ACAGGAGCCCTTCAGACTCGGACTCCCAAGAGCCCACCTATCACAATGTACCAGCCTGGGAAGAGCTGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483875.1
CDS CCA 72 bp TGCATTAGTGTACACTGGTTGCAGCTCTTCCCAGGCTaGTACATTGTGATAGGTGGGCTCTTGGGAGTCCGA +
Preference number: 6 (lower is better)
Translates to: CISVHWLQLFPG*YIVIGGLLGVR
Trigger: TCGGACTCCCAAGAGCCCACCTATCACAATGTACCAGCCTGGGAAGAGCTGCAACCAGTGTACACTAATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361835.8
ENST00000461387.5
ENST00000483875.1
ENST00000497286.5
CDS TCA 72 bp TCTGCACCTGTATCCAGGATCTCGGGCTGTCAGATATaGCGCTGTAAGGCATTGTTGCTGCCTTACACCAGT +
Preference number: 6 (lower is better)
Translates to: SAPVSRISGCQI*RCKALLLPYTS
Trigger: ACTGGTGTAAGGCAGCAACAATGCCTTACAGCGTCATATCTGACAGCCCGAGATCCTGGATACAGGTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361835.8
ENST00000368189.3
ENST00000368190.7
ENST00000481082.1
CDS TCA 72 bp CCAGACAAAGTAGCTATAATGATCACTCCTAGTGAGTaGCTTCTTACTGCAGGGTGGCTGCCAGGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: PDKVAIMITPSE*LLTAGWLPGLE
Trigger: TTCCAGGCCTGGCAGCCACCCTGCAGTAAGAAGTCACTCACTAGGAGTGATCATTATAGCTACTTTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483875.1
CDS TCA 72 bp CCCAAGGTACCGATGGTACCATTTTGTTTTCTGTGGTaGGTAGAAGCGAAATCCCTTGCAAGTGAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: PKVPMVPFCFLW*VEAKSLASEGH
Trigger: GTGACCCTCACTTGCAAGGGATTTCGCTTCTACTCACCACAGAAAACAAAATGGTACCATCGGTACCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361835.8
ENST00000368189.3
ENST00000368190.7
ENST00000481082.1
CDS TCA 72 bp TACATTGTGATAGGTGGGCTCTTGGGAGTCCGAGTCTaGAGGGCTCCTGTGAGACAGAGAAATGTGAATGTT +
Preference number: 6 (lower is better)
Translates to: YIVIGGLLGVRV*RAPVRQRNVNV
Trigger: AACATTCACATTTCTCTGTCTCACAGGAGCCCTTCAGACTCGGACTCCCAAGAGCCCACCTATCACAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483875.1
CDS GCA 72 bp AAAACAGGTTTGGACTTGATCTTACAGTCAGGACACTaGACACCAGCTCCAAGGAGCACATCTGAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: KTGLDLILQSGH*TPAPRSTSEKL
Trigger: CAGCTTCTCAGATGTGCTCCTTGGAGCTGGTGTGCAGTGTCCTGACTGTAAGATCAAGTCCAAACCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361835.8
CDS CCA 72 bp GTGAGTGACTTCTTACTGCAGGGTGGCTGCCAGGCCTaGAAACATGAACAAGTACATAACAAACTGACCATG +
Preference number: 6 (lower is better)
Translates to: VSDFLLQGGCQA*KHEQVHNKLTM
Trigger: CATGGTCAGTTTGTTATGTACTTGTTCATGTTTCCAGGCCTGGCAGCCACCCTGCAGTAAGAAGTCACTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483875.1
CDS GCA 72 bp TCACTCCTAGTGAGTGACTTCTTACTGCAGGGTGGCTaGCAGGCCTGGAAACATGAACAAGTACATAACAAA +
Preference number: 6 (lower is better)
Translates to: SLLVSDFLLQGG*QAWKHEQVHNK
Trigger: TTTGTTATGTACTTGTTCATGTTTCCAGGCCTGGCAGCCACCCTGCAGTAAGAAGTCACTCACTAGGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483875.1
CDS CAA 72 bp AAGAGAAGTTTCCTCAATTCCAAAACAGGTTTGGACTaGATCTTACAGTCAGGACACTGCACACCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: KRSFLNSKTGLD*ILQSGHCTPAP
Trigger: TGGAGCTGGTGTGCAGTGTCCTGACTGTAAGATCAAGTCCAAACCTGTTTTGGAATTGAGGAAACTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361835.8
ENST00000481082.1
CDS TCA 72 bp ACGGATGAGAAAATGTCATCATGTATCAGACTAATGTaGAGAGTTAGAGAGGACTGTGCTTCAACCTGGCTT +
Preference number: 6 (lower is better)
Translates to: TDEKMSSCIRLM*RVREDCASTWL
Trigger: AAGCCAGGTTGAAGCACAGTCCTCTCTAACTCTTCACATTAGTCTGATACATGATGACATTTTCTCATCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461387.5
CDS TCA 72 bp ACAGTGGTTATGTCTGGAGAATATGTGCGTAAGAAGTaGTATGAGCAGGTAGAAAGAGACCTTTACTTTTCA +
Preference number: 6 (lower is better)
Translates to: TVVMSGEYVRKK*YEQVERDLYFS
Trigger: TGAAAAGTAAAGGTCTCTTTCTACCTGCTCATATCACTTCTTACGCACATATTCTCCAGACATAACCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461387.5
CDS TCA 72 bp GAAAAACTACAAAACACTGGTGTAAGAAATCGCAGATaGCACAATCAAATGGAAACACATCCCATTCTCATG +
Preference number: 6 (lower is better)
Translates to: EKLQNTGVRNRR*HNQMETHPILM
Trigger: CATGAGAATGGGATGTGTTTCCATTTGATTGTGTCATCTGCGATTTCTTACACCAGTGTTTTGTAGTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497286.5
CDS CAA 90 bp AAAGAAATAAAGGACATCCAAATTGGTAAAGAGGAAGAAGTCAAATaGTTGCTGTTCACTGATGACATGATTGTATACCTAGGAAACCCT +
Preference number: 6 (lower is better)
Translates to: KEIKDIQIGKEEEVK*LLFTDDMIVYLGNP
Trigger: AGGGTTTCCTAGGTATACAATCATGTCATCAGTGAACAGCAACAATTTGACTTCTTCCTCTTTACCAATTTGGATGTCCTTTATTTCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497286.5