RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FCHSD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000137478

Ensembl transcript IDs: ENST00000311172.11, ENST00000409263.5, ENST00000409314.5, ENST00000409418.9, ENST00000409853.5, ENST00000422375.1, ENST00000432043.2, ENST00000458644.6

Found 557 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGACAGTCAGCACCTGACGTGGGGGCACCTGCTGCTGCAGGCTTaGTGGCCTGCAGAGAAGGCCACTCCTGGCTTTCCCTGTGACACA +
Preference number: 1 (lower is better)
Translates to: ADSQHLTWGHLLLQA*WPAEKATPGFPCDT
Trigger: TGTGTCACAGGGAAAGCCAGGAGTGGCCTTCTCTGCAGGCCAGCAAGCCTGCAGCAGCAGGTGCCCCCACGTCAGGTGCTGACTGTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 90 bp GTCAGGGTAGTGGGACCTGGAAGCTGCATTTTCCACCATAGCAGTTaGTCTGGACCAGCCACAGCCTGGCTGTCTGGGCCGGTCTGCTGG +
Preference number: 1 (lower is better)
Translates to: VRVVGPGSCIFHHSS*SGPATAWLSGPVCW
Trigger: CCAGCAGACCGGCCCAGACAGCCAGGCTGTGGCTGGTCCAGACCAACTGCTATGGTGGAAAATGCAGCTTCCAGGTCCCACTACCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 90 bp AGCTGCATTTTCCACCATAGCAGTTGGTCTGGACCAGCCACAGCCTaGCTGTCTGGGCCGGTCTGCTGGCTTGGGAATAAAATAATGCCG +
Preference number: 1 (lower is better)
Translates to: SCIFHHSSWSGPATA*LSGPVCWLGNKIMP
Trigger: CGGCATTATTTTATTCCCAAGCCAGCAGACCGGCCCAGACAGCCAGGCTGTGGCTGGTCCAGACCAACTGCTATGGTGGAAAATGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR TCA 90 bp GCAGGCTTGCTGGCCTGCAGAGAAGGCCACTCCTGGCTTTCCCTGTaGCACACAGAAGACACTTGTCTTTTCCTGGTCAATCTGTACTTG +
Preference number: 1 (lower is better)
Translates to: AGLLACREGHSWLSL*HTEDTCLFLVNLYL
Trigger: CAAGTACAGATTGACCAGGAAAAGACAAGTGTCTTCTGTGTGTCACAGGGAAAGCCAGGAGTGGCCTTCTCTGCAGGCCAGCAAGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 90 bp ACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCATAGAAAGCTaGTTTCCTCCACGAGCCACCAGGTTCTTCCTTCCACGGAAATGT +
Preference number: 1 (lower is better)
Translates to: TCAGCAILQSFLIES*FPPRATRFFLPRKC
Trigger: ACATTTCCGTGGAAGGAAGAACCTGGTGGCTCGTGGAGGAAACCAGCTTTCTATGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 90 bp ACTCCTGGCTTTCCCTGTGACACACAGAAGACACTTGTCTTTTCCTaGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTT +
Preference number: 1 (lower is better)
Translates to: TPGFPCDTQKTLVFS*SICTCAGCAILQSF
Trigger: AAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTTCTGTGTGTCACAGGGAAAGCCAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR GCA 90 bp CTCAATCAGATGAGCAAAAGCCACTTGAAGAAAGATGAGAATCTTTaGCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACAT +
Preference number: 1 (lower is better)
Translates to: LNQMSKSHLKKDENL*HILVVTVIYCTSAH
Trigger: ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTCATCTTTCTTCAAGTGGCTTTTGCTCATCTGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 90 bp TTAGCCACAGCCTCCTTTCTATTAGTCTATGTGATGAACAAGATGTaGCTACTAGTTCAGCCCCTCCATATTAGCTCTGCTAATTCTAAA +
Preference number: 1 (lower is better)
Translates to: LATASFLLVYVMNKM*LLVQPLHISSANSK
Trigger: TTTAGAATTAGCAGAGCTAATATGGAGGGGCTGAACTAGTAGCCACATCTTGTTCATCACATAGACTAATAGAAAGGAGGCTGTGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR GCA 90 bp ACGAAGGACACTGTTATTTTAAGTCTGTTAGTTGTGGAAGAGATGTaGGTTAATGCAATTGGTGCTAAATTCAGGGCAGTCCAATTTTTC +
Preference number: 1 (lower is better)
Translates to: TKDTVILSLLVVEEM*VNAIGAKFRAVQFF
Trigger: GAAAAATTGGACTGCCCTGAATTTAGCACCAATTGCATTAACGCACATCTCTTCCACAACTAACAGACTTAAAATAACAGTGTCCTTCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR TCA 90 bp CTGATTAATTCTCAATCAGATGAGCAAAAGCCACTTGAAGAAAGATaGGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTAC +
Preference number: 1 (lower is better)
Translates to: LINSQSDEQKPLEER*ESLPHPCGHSNILY
Trigger: GTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTCATCTTTCTTCAAGTGGCTTTTGCTCATCTGATTGAGAATTAATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 90 bp GAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTaGATTCTAAGGATACTGGTAAGAAGAGTATATGCTGTAAAAATT +
Preference number: 1 (lower is better)
Translates to: EAQQCRYVSSTYLDI*ILRILVRRVYAVKI
Trigger: AATTTTTACAGCATATACTCTTCTTACCAGTATCCTTAGAATCCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 90 bp CCAAATTCAAGGACAATTTGGCTAGCTAAAGACAGAATACAAGACTaGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGATTTTT +
Preference number: 1 (lower is better)
Translates to: PNSRTIWLAKDRIQD*VARTALFNKHLKIF
Trigger: AAAAATCTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGTCCTTGAATTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR GCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTCGTGGGGGCACCTGCTaGTGCAGGCTTGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: RALTCALWCWIPYPGWRGRGGTC*CRLAGL
Trigger: CAGGCCAGCAAGCCTGCAGCAGCAGGTGCCCCCACG...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTCACAGCCTGGCTGTCTaGGCCGGTCTGCTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: RALTCALWCWIPYPGWRGHSLAV*AGLLAW
Trigger: CCAAGCCAGCAGACCGGCCCAGACAGCCAGGCTGTG...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR GCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGCAGGCTTGCTGGCCTaGAGAGAAGGCCACTCCTGG +
Preference number: 2 (lower is better)
Translates to: PPSPDLCTVVLDSISWMEAGLLA*REGHSW
Trigger: CCAGGAGTGGCCTTCTCTGCAGGCCAGCAAGCCTGC...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGTTCCACCATAGCAGTTaGTCTGGACCAGCCACAGCC +
Preference number: 2 (lower is better)
Translates to: APYLLQERTADSQHLTWGFHHSS*SGPATA
Trigger: GGCTGTGGCTGGTCCAGACCAACTGCTATGGTGGAA...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR TCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTGGAGCCAGCCTCTCCTaGAATCCCTCCTTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: RALTCALWCWIPYPGWRGGASLS*NPSFCF
Trigger: GAAACAGAAGGAGGGATTTCAGGAGAGGCTGGCTCC...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR GCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGGTCAATCTGTACTTGTaGAGGGTGCGCAATCCTTCA +
Preference number: 2 (lower is better)
Translates to: APYLLQERTADSQHLTWGVNLYL*RVRNPS
Trigger: TGAAGGATTGCGCACCCTGCACAAGTACAGATTGAC...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR GCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGCTGTCTGGGCCGGTCTaGTGGCTTGGGAATAAAATA +
Preference number: 2 (lower is better)
Translates to: PPSPDLCTVVLDSISWMELSGPV*WLGNKI
Trigger: TATTTTATTCCCAAGCCAGCAGACCGGCCCAGACAG...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTGGACCAGCCACAGCCTaGCTGTCTGGGCCGGTCTGC +
Preference number: 2 (lower is better)
Translates to: KTLVFSWSICTCAGCAILGPATA*LSGPVC
Trigger: GCAGACCGGCCCAGACAGCCAGGCTGTGGCTGGTCC...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR GCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGTGTACTTGTGCAGGGTaGGCAATCCTTCAGTCCTTT +
Preference number: 2 (lower is better)
Translates to: PPSPDLCTVVLDSISWMECTCAG*AILQSF
Trigger: AAAGGACTGAAGGATTGCGCACCCTGCACAAGTACA...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTTGGTCAAAAATCCCATaGGGACATTTGGCGAGCATT +
Preference number: 2 (lower is better)
Translates to: RALTCALWCWIPYPGWRGWSKIP*GHLASI
Trigger: AATGCTCGCCAAATGTCCCCATGGGATTTTTGACCA...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR GCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTAAAGATGAGAATCTTTaGCACATCCTTGTGGTCACA +
Preference number: 2 (lower is better)
Translates to: RALTCALWCWIPYPGWRGKDENL*HILVVT
Trigger: TGTGACCACAAGGATGTGGCAAAGATTCTCATCTTT...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTGAATACAAGACTGGGTaGCAAGAACTGCTCTATTTA +
Preference number: 2 (lower is better)
Translates to: RALTCALWCWIPYPGWRGEYKTG*QELLYL
Trigger: TAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTC...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR TCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTTTTCAAATAACCCTTTaGGGTTGTGGAAAACCCAAA +
Preference number: 2 (lower is better)
Translates to: RALTCALWCWIPYPGWRGFQITL*GCGKPK
Trigger: TTTGGGTTTTCCACAACCTCAAAGGGTTATTTGAAA...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR GCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTGTTGTGGAAGAGATGTaGGTTAATGCAATTGGTGCT +
Preference number: 2 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTVVEEM*VNAIGA
Trigger: AGCACCAATTGCATTAACGCACATCTCTTCCACAAC...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR TCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTGTAGCCAACATGATCTaGTTAATTCTCAATCAGATG +
Preference number: 2 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTVANMI*LILNQM
Trigger: CATCTGATTGAGAATTAATCAGATCATGTTGGCTAC...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCGAAATATTCAAAACGTaGGAGGAGTCTACCAGGCCA +
Preference number: 2 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAEIFKT*EESTRP
Trigger: TGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTC...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTGAAATATTCAAAACGTaGGAGGAGTCTACCAGGCCA +
Preference number: 2 (lower is better)
Translates to: VRVHMISNLGTVPWNEACEIFKT*EESTRP
Trigger: TGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTC...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR GCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCAAGAGAAGCTCAACAATaGAGGTATGTGTCCTCAACT +
Preference number: 2 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSREAQQ*RYVSST
Trigger: AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCT...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR GCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAGTGGGACCTGGAAGCTaGATTTTCCACCATAGCAGT +
Preference number: 2 (lower is better)
Translates to: TIWLAKDRIQDWVARTALVGPGS*IFHHSS
Trigger: ACTGCTATGGTGGAAAATGCAGCTTCCAGGTCCCAC...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR TCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCCACTTGAAGAAAGATaGGAATCTTTGCCACATCCT +
Preference number: 2 (lower is better)
Translates to: KTLVFSWSICTCAGCAILPLEER*ESLPHP
Trigger: AGGATGTGGCAAAGATTCTCATCTTTCTTCAAGTGG...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGAAATATTCAAAACGTaGGAGGAGTCTACCAGGCCA +
Preference number: 2 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEEIFKT*EESTRP
Trigger: TGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTC...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTCTCATAGAAAGCTaGTTTCCTCCACGAGCCACC +
Preference number: 2 (lower is better)
Translates to: TIWLAKDRIQDWVARTALFLIES*FPPRAT
Trigger: GGTGGCTCGTGGAGGAAACCAGCTTTCTATGAGAAA...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR TCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACCCACTTGAAGAAAGATaGGAATCTTTGCCACATCCT +
Preference number: 2 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDPLEER*ESLPHP
Trigger: AGGATGTGGCAAAGATTCTCATCTTTCTTCAAGTGG...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR TCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGTCCTGGCTTTCCCTGTaGCACACAGAAGACACTTGT +
Preference number: 2 (lower is better)
Translates to: DRIQDWVARTALFNKHLKSWLSL*HTEDTC
Trigger: ACAAGTGTCTTCTGTGTGTCACAGGGAAAGCCAGGA...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR TCA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAGTTTAGGTCAAACGTaGCCAAATAAAGAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGSLGQT*PNKECL
Trigger: AAGGCACTCTTTATTTGGTCACGTTTGACCTAAACT...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
3UTR-3UTR CCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGGTGATGAACAAGATGTaGCTACTAGTTCAGCCCCTC +
Preference number: 2 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWVMNKM*LLVQPL
Trigger: GAGGGGCTGAACTAGTAGCCACATCTTGTTCATCAC...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CCA 90 bp CATAACCCACTTGGCCAACTTTATTTCGAGCCTTTACCCAGTCTTCCATATCTCAATGGTCAACTCATCTaGTTGAGAAGCCTTGTAGGA +
Preference number: 2 (lower is better)
Translates to: HNPLGQLYFEPLPSLPYLNGQLI*LRSLVG
Trigger: TCCTACAAGGCTTCTCAACCAGATGAGTTGACCATT...GAGATATGGAAGACTGGGTAAAGGCTCGAAATAAAGTTGGCCAAGTGGGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
3UTR-3UTR GCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGGTCAATCTGTACTTGTaGAGGGTGCGCAATCCTTCA +
Preference number: 2 (lower is better)
Translates to: DRIQDWVARTALFNKHLKVNLYL*RVRNPS
Trigger: TGAAGGATTGCGCACCCTGCACAAGTACAGATTGAC...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGGTGATGAACAAGATGTaGCTACTAGTTCAGCCCCTC +
Preference number: 2 (lower is better)
Translates to: DRIQDWVARTALFNKHLKVMNKM*LLVQPL
Trigger: GAGGGGCTGAACTAGTAGCCACATCTTGTTCATCAC...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR TCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACGTAGCCAACATGATCTaGTTAATTCTCAATCAGATG +
Preference number: 2 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDVANMI*LILNQM
Trigger: CATCTGATTGAGAATTAATCAGATCATGTTGGCTAC...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR GCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAAAAGATGAGAATCTTTaGCACATCCTTGTGGTCACA +
Preference number: 2 (lower is better)
Translates to: TIWLAKDRIQDWVARTALKDENL*HILVVT
Trigger: TGTGACCACAAGGATGTGGCAAAGATTCTCATCTTT...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CAA 90 bp AGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTaGGATTCTAAGGATACTGGTAAGAAGAGTATATGCTGTAAAAAT +
Preference number: 2 (lower is better)
Translates to: RSSTMQVCVLNLSRH*DSKDTGKKSICCKN
Trigger: ATTTTTACAGCATATACTCTTCTTACCAGTATCCTTAGAATCCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 72 bp GTGGGACCTGGAAGCTGCATTTTCCACCATAGCAGTTaGTCTGGACCAGCCACAGCCTGGCTGTCTGGGCCG +
Preference number: 3 (lower is better)
Translates to: VGPGSCIFHHSS*SGPATAWLSGP
Trigger: CGGCCCAGACAGCCAGGCTGTGGCTGGTCCAGACCAACTGCTATGGTGGAAAATGCAGCTTCCAGGTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CAA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGCTGGTCAATCTGTACTaGTGCAGGGTGCGCAATCCT +
Preference number: 3 (lower is better)
Translates to: APYLLQERTADSQHLTWGLVNLY*CRVRNP
Trigger: AGGATTGCGCACCCTGCACAAGTACAGATTGACCAG...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR GCA 72 bp ACATCTGCACAGAGGCTCCCTCCGAGCCCTGACCTGTaGACTGTGGTGCTGGATTCCATATCCTGGATGGAG +
Preference number: 3 (lower is better)
Translates to: TSAQRLPPSPDL*TVVLDSISWME
Trigger: CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGGGAGCCTCTGTGCAGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 72 bp TTCCACCATAGCAGTTGGTCTGGACCAGCCACAGCCTaGCTGTCTGGGCCGGTCTGCTGGCTTGGGAATAAA +
Preference number: 3 (lower is better)
Translates to: FHHSSWSGPATA*LSGPVCWLGNK
Trigger: TTTATTCCCAAGCCAGCAGACCGGCCCAGACAGCCAGGCTGTGGCTGGTCCAGACCAACTGCTATGGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 72 bp CACAGAGGCTCCCTCCGAGCCCTGACCTGTGCACTGTaGTGCTGGATTCCATATCCTGGATGGAGGGGTTAT +
Preference number: 3 (lower is better)
Translates to: HRGSLRALTCAL*CWIPYPGWRGY
Trigger: ATAACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGGGAGCCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CAA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGACTCCAAGCCTGGCCTaGATTGTAGCAGTAATGGAT +
Preference number: 3 (lower is better)
Translates to: APYLLQERTADSQHLTWGTPSLA*IVAVMD
Trigger: ATCCATTACTGCTACAATCAAGGCCAGGCTTGGAGT...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 72 bp CCAGGGACTGCAGCATGCTCAGGAGGCTGTTCGAGGTaGGAAACTGTAGGTACTTTTCTGGCACATAACCCA +
Preference number: 3 (lower is better)
Translates to: PGTAACSGGCSR*ETVGTFLAHNP
Trigger: TGGGTTATGTGCCAGAAAAGTACCTACAGTTTCCCACCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432043.2
3UTR-3UTR CAA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGTGTGCGTTAATGCAATaGGTGCTAAATTCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: PPSPDLCTVVLDSISWMECALMQ*VLNSGQ
Trigger: CTGCCCTGAATTTAGCACCAATTGCATTAACGCACA...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 72 bp GGGTGCGCAATCCTTCAGTCCTTTCTCATAGAAAGCTaGTTTCCTCCACGAGCCACCAGGTTCTTCCTTCCA +
Preference number: 3 (lower is better)
Translates to: GCAILQSFLIES*FPPRATRFFLP
Trigger: TGGAAGGAAGAACCTGGTGGCTCGTGGAGGAAACCAGCTTTCTATGAGAAAGGACTGAAGGATTGCGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CAA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAGTCTGGGGACTAACCTaGGGGAGGAGCCAGCCTCTC +
Preference number: 3 (lower is better)
Translates to: TIWLAKDRIQDWVARTALVWGLT*GRSQPL
Trigger: GAGAGGCTGGCTCCTCCCCAAGGTTAGTCCCCAGAC...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CAA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGGTCTGGGGACTAACCTaGGGGAGGAGCCAGCCTCTC +
Preference number: 3 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWVWGLT*GRSQPL
Trigger: GAGAGGCTGGCTCCTCCCCAAGGTTAGTCCCCAGAC...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CAA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGATTTCAAATAACCCTTaGAGGTTGTGGAAAACCCAA +
Preference number: 3 (lower is better)
Translates to: PPSPDLCTVVLDSISWMEISNNP*RLWKTQ
Trigger: TTGGGTTTTCCACAACCTCAAAGGGTTATTTGAAAT...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CAA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAACTCCAAGCCTGGCCTaGATTGTAGCAGTAATGGAT +
Preference number: 3 (lower is better)
Translates to: ARNIQNVGGVYQATQSHITPSLA*IVAVMD
Trigger: ATCCATTACTGCTACAATCAAGGCCAGGCTTGGAGT...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CAA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTACTCCAAGCCTGGCCTaGATTGTAGCAGTAATGGAT +
Preference number: 3 (lower is better)
Translates to: KTLVFSWSICTCAGCAILTPSLA*IVAVMD
Trigger: ATCCATTACTGCTACAATCAAGGCCAGGCTTGGAGT...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CAA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTACTGGTCAATCTGTACTaGTGCAGGGTGCGCAATCCT +
Preference number: 3 (lower is better)
Translates to: TIWLAKDRIQDWVARTALLVNLY*CRVRNP
Trigger: AGGATTGCGCACCCTGCACAAGTACAGATTGACCAG...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR GCA 72 bp CTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTaGGCAATCCTTCAGTCCTTTCTCATAGAAAGCTGG +
Preference number: 3 (lower is better)
Translates to: LVFSWSICTCAG*AILQSFLIESW
Trigger: CCAGCTTTCTATGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CAA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCAATCCTCCTTGTTTTTaGCTCTGTTCAAGAGTCATC +
Preference number: 3 (lower is better)
Translates to: TVRVHMISNLGTVPWNEANPPCF*LCSRVI
Trigger: GATGACTCTTGAACAGAGCAAAAAACAAGGAGGATT...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
3UTR GCA 72 bp GAAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTaGAGGGTGCGCAATCCTTCAGTCCTTTCTCATAGA +
Preference number: 3 (lower is better)
Translates to: EDTCLFLVNLYL*RVRNPSVLSHR
Trigger: TCTATGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CAA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATACTCCAAGCCTGGCCTaGATTGTAGCAGTAATGGAT +
Preference number: 3 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHTPSLA*IVAVMD
Trigger: ATCCATTACTGCTACAATCAAGGCCAGGCTTGGAGT...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CAA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGCTGGTCAATCTGTACTaGTGCAGGGTGCGCAATCCT +
Preference number: 3 (lower is better)
Translates to: DRIQDWVARTALFNKHLKLVNLY*CRVRNP
Trigger: AGGATTGCGCACCCTGCACAAGTACAGATTGACCAG...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR-3UTR CAA 90 bp GTACTTTTCTGGCACATAACCCACTTGGCCAACTTTATTTCGAGCCTTTACCCAGGTCAACTCATCTGGTaGAGAAGCCTTGTAGGAATA +
Preference number: 3 (lower is better)
Translates to: VLFWHITHLANFISSLYPGQLIW*RSLVGI
Trigger: TATTCCTACAAGGCTTCTCAACCAGATGAGTTGACC...TGGGTAAAGGCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGCCAGAAAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432043.2
3UTR-3UTR CAA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAACACACAGAAGACACTaGTCTTTTCCTGGTCAATCT +
Preference number: 3 (lower is better)
Translates to: TIWLAKDRIQDWVARTALTHRRH*SFPGQS
Trigger: AGATTGACCAGGAAAAGACAAGTGTCTTCTGTGTGT...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR TCA 72 bp TATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTaGAGGCTTACTCCAGGGCAATACAGTTTAGGTCAA +
Preference number: 3 (lower is better)
Translates to: YRTGGKLCFLSY*RLTPGQYSLGQ
Trigger: TTGACCTAAACTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
3UTR TCA 72 bp TCTCAATCAGATGAGCAAAAGCCACTTGAAGAAAGATaGGAATCTTTGCCACATCCTTGTGGTCACAGTAAT +
Preference number: 3 (lower is better)
Translates to: SQSDEQKPLEER*ESLPHPCGHSN
Trigger: ATTACTGTGACCACAAGGATGTGGCAAAGATTCTCATCTTTCTTCAAGTGGCTTTTGCTCATCTGATTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 72 bp AGGACAATTTGGCTAGCTAAAGACAGAATACAAGACTaGGTGGCAAGAACTGCTCTATTTAATAAGCATTTG +
Preference number: 3 (lower is better)
Translates to: RTIWLAKDRIQD*VARTALFNKHL
Trigger: CAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CCA 72 bp CAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTaGATTCTAAGGATACTGGTAAGAAGAGTATATGCT +
Preference number: 3 (lower is better)
Translates to: QCRYVSSTYLDI*ILRILVRRVYA
Trigger: AGCATATACTCTTCTTACCAGTATCCTTAGAATCCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGGGACCAGCCACAGCCTaGCTGTCTGGGCCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGGPATA*LSGPVC
Trigger: GCAGACCGGCCCAGACAGCCAGGCTGTGGCTGGTCC...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTGGACCAGCCACAGCCTaGCTGTCTGGGCCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGGPATA*LSGPVC
Trigger: GCAGACCGGCCCAGACAGCCAGGCTGTGGCTGGTCC...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGCTCCCTCCGAGCCCTaGCCTGTGCACTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMEAPSEP*PVHCGA
Trigger: AGCACCACAGTGCACAGGTCAGGGCTCGGAGGGAGC...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGATTGCTGGACGTGTGTaGCCGACTGTCCAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGIAGRV*PTVQSG
Trigger: GCCGCTTTGGACAGTCGGTCACACACGTCCAGCAAT...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGAGGTGGAGGGGGAGCTaGCCGGACAGGTCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMERWRGS*PDRSQF
Trigger: AAACTGCGACCTGTCCGGGCAGCTCCCCCTCCACCT...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGGGAGCCAGCCTCTCCTaGAATCCCTCCTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGGASLS*NPSFCF
Trigger: GAAACAGAAGGAGGGATTTCAGGAGAGGCTGGCTCC...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGCCAGGGACTGCAGCATaGTCAGGAGGCTGTTCGAGG +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMEPGTAA*SGGCSR
Trigger: CCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGG...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTGCAGGCTTGCTGGCCTaGAGAGAAGGCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTAGLLA*REGHSW
Trigger: CCAGGAGTGGCCTTCTCTGCAGGCCAGCAAGCCTGC...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTTTAAGAAGCAAGACTTaGCCCGGAGGGAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGLRSKT*PGGSRP
Trigger: TGGCCTGCTCCCTCCGGGGCAAGTCTTGCTTCTTAA...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGGTGGGACCTGGAAGCTaGATTTTCCACCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGVGPGS*IFHHSS
Trigger: ACTGCTATGGTGGAAAATGCAGCTTCCAGGTCCCAC...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCCGTGGGGGCACCTGCTaGTGCAGGCTTGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEARGGTC*CRLAGL
Trigger: CAGGCCAGCAAGCCTGCAGCAGCAGGTGCCCCCACG...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGTCACTGTCACAAGGCTaGAACTGGAAGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMESLSQG*NWKGWG
Trigger: ACCCCAGCCCTTCCAGTTCCAGCCTTGTGACAGTGA...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGTAAAGTGCCATTACTaGTCACTGCAGGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMEVKCHY*SLQEGG
Trigger: CCCGCCCTCCTGCAGTGACCAGTAATGGCACTTTAC...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAGGACCAGCCACAGCCTaGCTGTCTGGGCCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: ARNIQNVGGVYQATQSHIGPATA*LSGPVC
Trigger: GCAGACCGGCCCAGACAGCCAGGCTGTGGCTGGTCC...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGTTCCACCATAGCAGTTaGTCTGGACCAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMEFHHSS*SGPATA
Trigger: GGCTGTGGCTGGTCCAGACCAACTGCTATGGTGGAA...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGCTGACCTGTGCACTGTaGTGCTGGATTCCATATCCT +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGLTCAL*CWIPYP
Trigger: AGGATATGGAATCCAGCACCACAGTGCACAGGTCAG...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCGGCTGGGGTAGGGGCTaGTGGGAGGCTGGTCGTACA +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAGWGRG*WEAGRT
Trigger: TGTACGACCAGCCTCCCAGCAGCCCCTACCCCAGCC...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAGGCTGGGGTAGGGGCTaGTGGGAGGCTGGTCGTACA +
Preference number: 4 (lower is better)
Translates to: ARNIQNVGGVYQATQSHIGWGRG*WEAGRT
Trigger: TGTACGACCAGCCTCCCAGCAGCCCCTACCCCAGCC...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGACAGGTCGCAGTTTaGCATATGAGGTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMEGQVAV*HMRSQE
Trigger: CTCCTGAGACCTCATATGGCAAACTGCGACCTGTCC...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGGTGTTCTGCACAGCTTaGCATGTTTCTAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGVFCTA*HVSSSV
Trigger: GACTGAGCTAGAAACATGCCAAGCTGTGCAGAACAC...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGTGTAGCAGTAATGGATaGGCAAGCCCATCATCACAC +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGCSSNG*ASPSSH
Trigger: GTGTGATGATGGGCTTGCCCATCCATTACTGCTACA...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCCACAGCCTGGCTGTCTaGGCCGGTCTGCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAHSLAV*AGLLAW
Trigger: CCAAGCCAGCAGACCGGCCCAGACAGCCAGGCTGTG...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTCACAGCCTGGCTGTCTaGGCCGGTCTGCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACHSLAV*AGLLAW
Trigger: CCAAGCCAGCAGACCGGCCCAGACAGCCAGGCTGTG...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGTTTCTCATAGAAAGCTaGTTTCCTCCACGAGCCACC +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGFLIES*FPPRAT
Trigger: GGTGGCTCGTGGAGGAAACCAGCTTTCTATGAGAAA...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GCCAGGGACTGCAGCATGCTCAGGAGGCTGTTCGAGGTGGGAAACTGTAGGTACTGCTCGGCTTTGTTCTaGTACAGCAGCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: ARDCSMLRRLFEVGNCRYCSALF*YSSSMT
Trigger: TGTCATGGAGCTGCTGTATCAGAACAAAGCCGAGCA...GTACCTACAGTTTCCCACCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR TCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGTCCTGGCTTTCCCTGTaGCACACAGAAGACACTTGT +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMESWLSL*HTEDTC
Trigger: ACAAGTGTCTTCTGTGTGTCACAGGGAAAGCCAGGA...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTCGAGACTGGGCTACCTaGATTGTTCCCTCGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGRDWAT*IVPSRK
Trigger: TTTTCTCGAGGGAACAATGCAGGTAGCCCAGTCTCG...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGTCCTTATTTAGACTGTaGTCCTCTGTGGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGSLFRL*SSVVPV
Trigger: AACTGGGACCACAGAGGAGCACAGTCTAAATAAGGA...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAGCCATTACTGGTCACTaGAGGAGGGCGGGCCCATCG +
Preference number: 4 (lower is better)
Translates to: ARNIQNVGGVYQATQSHIAITGH*RRAGPS
Trigger: CGATGGGCCCGCCCTCCTGCAGTGACCAGTAATGGC...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCAGGTGGAGGGGGAGCTaGCCGGACAGGTCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEARWRGS*PDRSQF
Trigger: AAACTGCGACCTGTCCGGGCAGCTCCCCCTCCACCT...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCGCAGGCTTGCTGGCCTaGAGAGAAGGCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAAGLLA*REGHSW
Trigger: CCAGGAGTGGCCTTCTCTGCAGGCCAGCAAGCCTGC...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GCCAGGGACTGCAGCATGCTCAGGAGGCTGTTCGAGGTGGGAAACTGTAGGTACAGGTGCCAGAAGGGCTaGAACTGCTGTCATCGAAAA +
Preference number: 4 (lower is better)
Translates to: ARDCSMLRRLFEVGNCRYRCQKG*NCCHRK
Trigger: TTTTCGATGACAGCAGTTCCAGCCCTTCTGGCACCT...GTACCTACAGTTTCCCACCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR CCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTGTCGTACAACGGCAGTaGAGGCAGGGAGGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACVVQRQ*RQGGVW
Trigger: CCACACGCCTCCCTGCCTCCACTGCCGTTGTACGAC...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCGGGCTGCTGGGAGGCTaGTCGTACAACGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAGLLGG*SYNGSG
Trigger: TCCACTGCCGTTGTACGACCAGCCTCCCAGCAGCCC...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATATGGGGTAGGGGCTGCTaGGAGGCTGGTCGTACAACG +
Preference number: 4 (lower is better)
Translates to: ARNIQNVGGVYQATQSHIWGRGC*EAGRTT
Trigger: CGTTGTACGACCAGCCTCCCAGCAGCCCCTACCCCA...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGTTCAATCTTCTCTGCTaGCCTTCGGTGATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGFNLLC*PSVILC
Trigger: ACACAGAATCACCGAAGGCCAGCAGAGAAGATTGAA...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTTGTGCACTGTGGTGCTaGATTCCATATCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGCALWC*IPYPGW
Trigger: CCATCCAGGATATGGAATCCAGCACCACAGTGCACA...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGCTGACCTGTGCACTGTaGTGCTGGATTCCATATCCT +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMELTCAL*CWIPYP
Trigger: AGGATATGGAATCCAGCACCACAGTGCACAGGTCAG...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTGAGCGCGCGCGTGTGTaGAAGGAGCGCTTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACERARV*KERLRS
Trigger: GCTTCTTAAGCGCTCCTTTCACACACGCGCGCGCTC...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGTCTCTCTTCAGGTATTaGCTAGCCAACTTCTGCATA +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGSLFRY*LANFCI
Trigger: TATGCAGAAGTTGGCTAGTCAATACCTGAAGAGAGA...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTGCTCCCTCCGAGCCCTaGCCTGTGCACTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILAPSEP*PVHCGA
Trigger: AGCACCACAGTGCACAGGTCAGGGCTCGGAGGGAGC...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTCAGAAGGGCTGGAACTaGTGTCATCGAAAACATCCA +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGQKGWN*CHRKHP
Trigger: TGGATGTTTTCGATGACAGCAGTTCCAGCCCTTCTG...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTCCAGGGACTGCAGCATaGTCAGGAGGCTGTTCGAGG +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACPGTAA*SGGCSR
Trigger: CCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGG...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTAAAGCGGCCAGGGACTaGAGCATGCTCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACKAARD*SMLRRL
Trigger: CAGCCTCCTGAGCATGCTGCAGTCCCTGGCCGCTTT...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTGGACAGGTCGCAGTTTaGCATATGAGGTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTGQVAV*HMRSQE
Trigger: CTCCTGAGACCTCATATGGCAAACTGCGACCTGTCC...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTTGTACTTGTGCAGGGTaGGCAATCCTTCAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGCTCAG*AILQSF
Trigger: AAAGGACTGAAGGATTGCGCACCCTGCACAAGTACA...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACCGTGGGGGCACCTGCTaGTGCAGGCTTGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDRGGTC*CRLAGL
Trigger: CAGGCCAGCAAGCCTGCAGCAGCAGGTGCCCCCACG...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCCCGAGCCCTGACCTGTaGACTGTGGTGCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAPSPDL*TVVLDS
Trigger: GGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGG...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AGGGACTGCAGCATGCTCAGGAGGCTGTTCGAGGTGGGAAACTGTAGGTACTTTGTAAAGTGCCATTACTaGTCACTGCAGGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RDCSMLRRLFEVGNCRYFVKCHY*SLQEGG
Trigger: CCCGCCCTCCTGCAGTGACCAGTAATGGCACTTTAC...AAAGTACCTACAGTTTCCCACCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR CCA 90 bp GCCAGGGACTGCAGCATGCTCAGGAGGCTGTTCGAGGTGGGAAACTGTAGGTACGGAGGCTGTTCGAGGTaGGAAACTGTAGGTACTTTT +
Preference number: 4 (lower is better)
Translates to: ARDCSMLRRLFEVGNCRYGGCSR*ETVGTF
Trigger: AAAAGTACCTACAGTTTCCCACCTCGAACAGCCTCC...GTACCTACAGTTTCCCACCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR CCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCAGTCGTACAACGGCAGTaGAGGCAGGGAGGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSVVQRQ*RQGGVW
Trigger: CCACACGCCTCCCTGCCTCCACTGCCGTTGTACGAC...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCGGAGCTCCTCTTATCTaGGCTGGGGTAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAGAPLI*AGVGAA
Trigger: AGCAGCCCCTACCCCAGCCCAGATAAGAGGAGCTCC...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTGGAGCTCCTCTTATCTaGGCTGGGGTAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFGAPLI*AGVGAA
Trigger: AGCAGCCCCTACCCCAGCCCAGATAAGAGGAGCTCC...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTATTGCTGGACGTGTGTaGCCGACTGTCCAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFIAGRV*PTVQSG
Trigger: GCCGCTTTGGACAGTCGGTCACACACGTCCAGCAAT...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTGGGGAAGGAGAGATCTaGATCTCTCTCATCCATGGA +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTGEGEI*ISLIHG
Trigger: TCCATGGATGAGAGAGATTCAGATCTCTCCTTCCCC...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTCTGCTGGCCTTCGGTaGTTCTGTGTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEASAGLR*FCVGGG
Trigger: CCCTCCACCTACACAGAATCACCGAAGGCCAGCAGA...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATATCTGCTGGCCTTCGGTaGTTCTGTGTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ARNIQNVGGVYQATQSHISAGLR*FCVGGG
Trigger: CCCTCCACCTACACAGAATCACCGAAGGCCAGCAGA...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTCCTGGCTTTCCCTGTaGCACACAGAAGACACTTGT +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTSWLSL*HTEDTC
Trigger: ACAAGTGTCTTCTGTGTGTCACAGGGAAAGCCAGGA...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCTCCCTCCGAGCCCTaGCCTGTGCACTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEAPSEP*PVHCGA
Trigger: AGCACCACAGTGCACAGGTCAGGGCTCGGAGGGAGC...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTGCCAGAGAGCGAGTGTaGGGAGACGAGGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILARERV*GDEGGA
Trigger: TGCTCCTCCCTCGTCTCCTCACACTCGCTCTCTGGC...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409418.9
CDS-3UTR GCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTTCCTCGGCGGCGGCTaGATGATGCTGAAGGGACAT +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAFLGGG*MMLKGH
Trigger: ATGTCCCTTCAGCATCATGCAGCCGCCGCCGAGGAA...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TTCTGGCACATAACCCACTTGGCCAACTTTATTTCGAGCCTTTACCCAGTCTTCGCCATTACTGGTCACTaGAGGAGGGCGGGCCCATCG +
Preference number: 4 (lower is better)
Translates to: FWHITHLANFISSLYPVFAITGH*RRAGPS
Trigger: CGATGGGCCCGCCCTCCTGCAGTGACCAGTAATGGC...GAAGACTGGGTAAAGGCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR GCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCACCAGGGACTGCAGCATaGTCAGGAGGCTGTTCGAGG +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSPGTAA*SGGCSR
Trigger: CCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGG...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGGCTGGGGTAGGGGCTaGTGGGAGGCTGGTCGTACA +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEGWGRG*WEAGRT
Trigger: TGTACGACCAGCCTCCCAGCAGCCCCTACCCCAGCC...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCTGCTGCTGCAGGCTTaGTGGCCTGCAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILLLLQA*WPAEKA
Trigger: GGCCTTCTCTGCAGGCCAGCAAGCCTGCAGCAGCAG...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTAGGTGCCAGAAGGGCTaGAACTGCTGTCATCGAAAA +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTRCQKG*NCCHRK
Trigger: TTTTCGATGACAGCAGTTCCAGCCCTTCTGGCACCT...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTCCTCATGTTCCTCAATaGTCAACTCATCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGPHVPQ*STHLVE
Trigger: CTCAACCAGATGAGTTGACCATTGAGGAACATGAGG...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTGTCGTACAACGGCAGTaGAGGCAGGGAGGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILVVQRQ*RQGGVW
Trigger: CCACACGCCTCCCTGCCTCCACTGCCGTTGTACGAC...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGTTCAATCTTCTCTGCTaGCCTTCGGTGATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMEFNLLC*PSVILC
Trigger: ACACAGAATCACCGAAGGCCAGCAGAGAAGATTGAA...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACCACAGCCTGGCTGTCTaGGCCGGTCTGCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDHSLAV*AGLLAW
Trigger: CCAAGCCAGCAGACCGGCCCAGACAGCCAGGCTGTG...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGACACTTGTCTTTTCCTaGTCAATCTGTACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGTLVFS*SICTCA
Trigger: TGCACAAGTACAGATTGACCAGGAAAAGACAAGTGT...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTGACAGAATACAAGACTaGGTGGCAAGAACTGCTCTA +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGDRIQD*VARTAL
Trigger: TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTTCCGTTGAGGCTGCCTaGAACGAGTTCTGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACSVEAA*NEFCFR
Trigger: ACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGA...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTCCACTTGAAGAAAGATaGGAATCTTTGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGPLEER*ESLPHP
Trigger: AGGATGTGGCAAAGATTCTCATCTTTCTTCAAGTGG...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTGGAGCCAGCCTCTCCTaGAATCCCTCCTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFGASLS*NPSFCF
Trigger: GAAACAGAAGGAGGGATTTCAGGAGAGGCTGGCTCC...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTCATTCTCAGAGCACTaGCAGGGGAGAGCTCAATAT +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTSFSEH*QGRAQY
Trigger: ATATTGAGCTCTCCCCTGTCAGTGCTCTGAGAATGA...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409314.5
CDS-3UTR GCA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATATTAAGAAGCAAGACTTaGCCCGGAGGGAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: ARNIQNVGGVYQATQSHILRSKT*PGGSRP
Trigger: TGGCCTGCTCCCTCCGGGGCAAGTCTTGCTTCTTAA...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTCTTCTGCATACCCTGTaGATACTCTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGLLHTL*ILSFNS
Trigger: GCTATTGAAAGAGAGTATGCACAGGGTATGCAGAAG...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGAAGATAATCATTCCTTaGGTGGGTAGCTTTGGAATT +
Preference number: 4 (lower is better)
Translates to: APYLLQERTADSQHLTWGKIIIP*VGSFGI
Trigger: AATTCCAAAGCTACCCACGCAAGGAATGATTATCTT...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTAACTGGAATGTGTTCTaGACAGCTTGGCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGNWNVF*TAWHVS
Trigger: AGAAACATGCCAAGCTGTGCAGAACACATTCCAGTT...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGGCCATTACTGGTCACTaGAGGAGGGCGGGCCCATCG +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQAITGH*RRAGPS
Trigger: CGATGGGCCCGCCCTCCTGCAGTGACCAGTAATGGC...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCCCAGGGACTGCAGCATaGTCAGGAGGCTGTTCGAGG +
Preference number: 4 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGPGTAA*SGGCSR
Trigger: CCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGG...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTAAAGCGGCCAGGGACTaGAGCATGCTCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILKAARD*SMLRRL
Trigger: CAGCCTCCTGAGCATGCTGCAGTCCCTGGCCGCTTT...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAAAGCGGCCAGGGACTaGAGCATGCTCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGKAARD*SMLRRL
Trigger: CAGCCTCCTGAGCATGCTGCAGTCCCTGGCCGCTTT...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTCTGCTTCCGTGGAATTaGTGGACGTGTGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACLLPWN*WTCVTD
Trigger: GTCGGTCACACACGTCCAGCAATTCCACGGAAGCAG...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTGAGGTCTCAGGAGTATaGCTTGATGCCTGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTEVSGV*LDACEN
Trigger: ATTCTCACAGGCATCAAGGCATACTCCTGAGACCTC...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGAGGTGGAGGGGGAGCTaGCCGGACAGGTCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNERWRGS*PDRSQF
Trigger: AAACTGCGACCTGTCCGGGCAGCTCCCCCTCCACCT...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTGTTGTGGAAGAGATGTaGGTTAATGCAATTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGVVEEM*VNAIGA
Trigger: AGCACCAATTGCATTAACGCACATCTCTTCCACAAC...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGCTGCTGCTGCAGGCTTaGTGGCCTGCAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQLLLQA*WPAEKA
Trigger: GGCCTTCTCTGCAGGCCAGCAAGCCTGCAGCAGCAG...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTATATTCATCCGAGACTaGGCTACCTGCATTGTTCCC +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTIFIRD*ATCIVP
Trigger: GGGAACAATGCAGGTAGCCCAGTCTCGGATGAATAT...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTTCACTGTCACAAGGCTaGAACTGGAAGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACSLSQG*NWKGWG
Trigger: ACCCCAGCCCTTCCAGTTCCAGCCTTGTGACAGTGA...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTGACTGTGCTCCTCTGTaGTCCCAGTTTCTGATTCTA +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTDCAPL*SQFLIL
Trigger: TAGAATCAGAAACTGGGACCACAGAGGAGCACAGTC...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTGTAAAGTGCCATTACTaGTCACTGCAGGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFVKCHY*SLQEGG
Trigger: CCCGCCCTCCTGCAGTGACCAGTAATGGCACTTTAC...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGAATGGTCAACTCATCTaGTTGAGAAGCCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMENGQLI*LRSLVG
Trigger: TCCTACAAGGCTTCTCAACCAGATGAGTTGACCATT...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGGGGCTGCTGGGAGGCTaGTCGTACAACGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQGLLGG*SYNGSG
Trigger: TCCACTGCCGTTGTACGACCAGCCTCCCAGCAGCCC...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGGGCTGCTGGGAGGCTaGTCGTACAACGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEGLLGG*SYNGSG
Trigger: TCCACTGCCGTTGTACGACCAGCCTCCCAGCAGCCC...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGTGGGGTAGGGGCTGCTaGGAGGCTGGTCGTACAACG +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEWGRGC*EAGRTT
Trigger: CGTTGTACGACCAGCCTCCCAGCAGCCCCTACCCCA...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTGTGATTCTGTGTAGGTaGAGGGGGAGCTGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILVILCR*RGSCPD
Trigger: GTCCGGGCAGCTCCCCCTCCACCTACACAGAATCAC...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGTCCCATGGGGACATTTaGCGAGCATTTCAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMESHGDI*RAFQVF
Trigger: AAAAACTTGAAATGCTCGCCAAATGTCCCCATGGGA...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTCTAGCTCAGTCCGGCTaGAGGCTATTAAATAATCCT +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTLAQSG*RLLNNP
Trigger: AGGATTATTTAATAGCCTTCAGCCGGACTGAGCTAG...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTGATACAGCAGCTCCATaGCACTCCAGATCATTTAGA +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTDTAAP*HSRSFR
Trigger: TCTAAATGATCTGGAGTGTCATGGAGCTGCTGTATC...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCATCCGTTGAGGCTGCCTaGAACGAGTTCTGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSSVEAA*NEFCFR
Trigger: ACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGA...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTCTCCAATACGCCCATTaGATTCCCCTTCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFLQYAH*IPLPRS
Trigger: GCTTCTGGGAAGGGGAATTCAATGGGCGTATTGGAG...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTGCTTCTCACTGTCCTTaGAGGCTCAGAAATGAAGTT +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTASHCP*RLRNEV
Trigger: AACTTCATTTCTGAGCCTGCAAGGACAGTGAGAAGC...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTAGCTTTCTCTCGTACTaGATGAGCCATCTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTSFLSY*MSHLFS
Trigger: ACTGAACAGATGGCTCATGCAGTACGAGAGAAAGCT...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTGATAATTTCTTAAGGTaGCAGAAGGGCTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTDNFLR*QKGWNC
Trigger: GCAGTTCCAGCCCTTCTGGCACCTTAAGAAATTATC...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGCCAGGGACTGCAGCATaGTCAGGAGGCTGTTCGAGG +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEPGTAA*SGGCSR
Trigger: CCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGG...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGAAAGCGGCCAGGGACTaGAGCATGCTCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEKAARD*SMLRRL
Trigger: CAGCCTCCTGAGCATGCTGCAGTCCCTGGCCGCTTT...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CATAACCCACTTGGCCAACTTTATTTCGAGCCTTTACCCAGTCTTCCATATCTCAAAGCGGCCAGGGACTaGAGCATGCTCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HNPLGQLYFEPLPSLPYLKAARD*SMLRRL
Trigger: CAGCCTCCTGAGCATGCTGCAGTCCCTGGCCGCTTT...GAGATATGGAAGACTGGGTAAAGGCTCGAAATAAAGTTGGCCAAGTGGGTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR GCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTGGACAGGTCGCAGTTTaGCATATGAGGTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFGQVAV*HMRSQE
Trigger: CTCCTGAGACCTCATATGGCAAACTGCGACCTGTCC...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGCAGGCTTGCTGGCCTaGAGAGAAGGCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHAGLLA*REGHSW
Trigger: CCAGGAGTGGCCTTCTCTGCAGGCCAGCAAGCCTGC...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATCTGCTGCTGCAGGCTTaGTGGCCTGCAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHLLLQA*WPAEKA
Trigger: GGCCTTCTCTGCAGGCCAGCAAGCCTGCAGCAGCAG...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGCCGAGCCCTGACCTGTaGACTGTGGTGCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEPSPDL*TVVLDS
Trigger: GGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGG...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCACACGTGCCACACGTGTaGCCCATTTTCGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSHVPHV*PIFELP
Trigger: AGGAAGCTCGAAAATGGGCCACACGTGTGGCACGTG...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGAGTTCTTCCATTACTTaGTTCATGGCACTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMESSSIT*FMALFS
Trigger: GCTAAAGAGTGCCATGAACCAAGTAATGGAAGAACT...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTAGTTCTTCCATTACTTaGTTCATGGCACTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: RALTCALWCWIPYPGWRGSSSIT*FMALFS
Trigger: GCTAAAGAGTGCCATGAACCAAGTAATGGAAGAACT...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCAGTAAAGTGCCATTACTaGTCACTGCAGGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSVKCHY*SLQEGG
Trigger: CCCGCCCTCCTGCAGTGACCAGTAATGGCACTTTAC...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTCCTCATGTTCCTCAATaGTCAACTCATCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTPHVPQ*STHLVE
Trigger: CTCAACCAGATGAGTTGACCATTGAGGAACATGAGG...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTCTTCCGTGGAATTGCTaGACGTGTGTGACCGACTGT +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACLPWNC*TCVTDC
Trigger: ACAGTCGGTCACACACGTCCAGCAATTCCACGGAAG...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTCGAGTTCTGCTTCCGTaGAATTGCTGGACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFRVLLP*NCWTCV
Trigger: CACACACGTCCAGCAATTCCACGGAAGCAGAACTCG...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGGGCTGCTGGGAGGCTaGTCGTACAACGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHGLLGG*SYNGSG
Trigger: TCCACTGCCGTTGTACGACCAGCCTCCCAGCAGCCC...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACGGAGCTCCTCTTATCTaGGCTGGGGTAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDGAPLI*AGVGAA
Trigger: AGCAGCCCCTACCCCAGCCCAGATAAGAGGAGCTCC...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGTGATTCTGTGTAGGTaGAGGGGGAGCTGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEVILCR*RGSCPD
Trigger: GTCCGGGCAGCTCCCCCTCCACCTACACAGAATCAC...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGAGCGCGCGCGTGTGTaGAAGGAGCGCTTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHERARV*KERLRS
Trigger: GCTTCTTAAGCGCTCCTTTCACACACGCGCGCGCTC...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGCAGCCTTCTTCTGACTaGATGTCCTTCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQQPSSD*MSFLGG
Trigger: GCCGCCGAGGAAGGACATTCAGTCAGAAGAAGGCTG...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311172.11
CDS-3UTR TCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTTGCTCGGCTTTGTTCTaGTACAGCAGCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACCSALF*YSSSMT
Trigger: TGTCATGGAGCTGCTGTATCAGAACAAAGCCGAGCA...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGATTGCTGGACGTGTGTaGCCGACTGTCCAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQIAGRV*PTVQSG
Trigger: GCCGCTTTGGACAGTCGGTCACACACGTCCAGCAAT...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGATTGCTGGACGTGTGTaGCCGACTGTCCAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQIAGRV*PTVQSG
Trigger: GCCGCTTTGGACAGTCGGTCACACACGTCCAGCAAT...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR TCA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATATCGCAGTTTGCCATATaGGGTCTCAGGAGTATGCCT +
Preference number: 4 (lower is better)
Translates to: ARNIQNVGGVYQATQSHISQFAI*GLRSMP
Trigger: AGGCATACTCCTGAGACCTCATATGGCAAACTGCGA...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTCGCAGTTTGCCATATaGGGTCTCAGGAGTATGCCT +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEASQFAI*GLRSMP
Trigger: AGGCATACTCCTGAGACCTCATATGGCAAACTGCGA...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTCTTCTGCATACCCTGTaGATACTCTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTLLHTL*ILSFNS
Trigger: GCTATTGAAAGAGAGTATGCACAGGGTATGCAGAAG...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATACGAGACTGGGCTACCTaGATTGTTCCCTCGAGAAAA +
Preference number: 4 (lower is better)
Translates to: ARNIQNVGGVYQATQSHIRDWAT*IVPSRK
Trigger: TTTTCTCGAGGGAACAATGCAGGTAGCCCAGTCTCG...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGGCCATTACTGGTCACTaGAGGAGGGCGGGCCCATCG +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWAITGH*RRAGPS
Trigger: CGATGGGCCCGCCCTCCTGCAGTGACCAGTAATGGC...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGGGCTGGGGTAGGGGCTaGTGGGAGGCTGGTCGTACA +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKGWGRG*WEAGRT
Trigger: TGTACGACCAGCCTCCCAGCAGCCCCTACCCCAGCC...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCCTGTCTGGGCCGGTCTaGTGGCTTGGGAATAAAATA +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEALSGPV*WLGNKI
Trigger: TATTTTATTCCCAAGCCAGCAGACCGGCCCAGACAG...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATACTGTCTGGGCCGGTCTaGTGGCTTGGGAATAAAATA +
Preference number: 4 (lower is better)
Translates to: ARNIQNVGGVYQATQSHILSGPV*WLGNKI
Trigger: TATTTTATTCCCAAGCCAGCAGACCGGCCCAGACAG...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTGTGGGACCTGGAAGCTaGATTTTCCACCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACVGPGS*IFHHSS
Trigger: ACTGCTATGGTGGAAAATGCAGCTTCCAGGTCCCAC...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTACCGAGCCCTGACCTGTaGACTGTGGTGCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALPSPDL*TVVLDS
Trigger: GGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGG...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGAAGCAAATCACATTCTaGTTGATGTTTGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PPSPDLCTVVLDSISWMEKQITF*LMFGLK
Trigger: CTTCAAGCCAAACATCAAGCAGAATGTGATTTGCTT...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTCCCGGACCACCTTGCTaGAGTTTTCTAATAAAAACT +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTPGPPC*SFLIKT
Trigger: AGTTTTTATTAGAAAACTCCAGCAAGGTGGTCCGGG...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCACGTGCCACACGTGTaGCCCATTTTCGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILHVPHV*PIFELP
Trigger: AGGAAGCTCGAAAATGGGCCACACGTGTGGCACGTG...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTAATGGTCAACTCATCTaGTTGAGAAGCCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTNGQLI*LRSLVG
Trigger: TCCTACAAGGCTTCTCAACCAGATGAGTTGACCATT...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCACGAGTTCTGCTTCCGTaGAATTGCTGGACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSRVLLP*NCWTCV
Trigger: CACACACGTCCAGCAATTCCACGGAAGCAGAACTCG...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGGTCGTACAACGGCAGTaGAGGCAGGGAGGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWVVQRQ*RQGGVW
Trigger: CCACACGCCTCCCTGCCTCCACTGCCGTTGTACGAC...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGTGGGGTAGGGGCTGCTaGGAGGCTGGTCGTACAACG +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWWGRGC*EAGRTT
Trigger: CGTTGTACGACCAGCCTCCCAGCAGCCCCTACCCCA...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTGCACTGTGGTGCTaGATTCCATATCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEACALWC*IPYPGW
Trigger: CCATCCAGGATATGGAATCCAGCACCACAGTGCACA...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CAA 72 bp CCACTCCTGGCTTTCCCTGTGACACACAGAAGACACTaGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PLLAFPVTHRRH*SFPGQSVLVQG
Trigger: ACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTTCTGTGTGTCACAGGGAAAGCCAGGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCAAGGGCTGGGGTTTGTaGAATACAGCGTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAKGWGL*NTAFSC
Trigger: GCAAGAAAACGCTGTATTTCACAAACCCCAGCCCTT...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACTCCGTTGAGGCTGCCTaGAACGAGTTCTGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDSVEAA*NEFCFR
Trigger: ACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGA...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGTCCGTTGAGGCTGCCTaGAACGAGTTCTGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQSVEAA*NEFCFR
Trigger: ACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGA...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR TCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATTCTGCTGGCCTTCGGTaGTTCTGTGTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHSAGLR*FCVGGG
Trigger: CCCTCCACCTACACAGAATCACCGAAGGCCAGCAGA...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTGTTTTTATGCTCACGTaGCACACGTGTGGCCCATTT +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFVFMLT*HTCGPF
Trigger: AAATGGGCCACACGTGTGGCACGTGAGCATAAAAAC...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAGTTTTTATGCTCACGTaGCACACGTGTGGCCCATTT +
Preference number: 4 (lower is better)
Translates to: ARNIQNVGGVYQATQSHIVFMLT*HTCGPF
Trigger: AAATGGGCCACACGTGTGGCACGTGAGCATAAAAAC...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCACAGAAACACCAATCTaGTTTAGCAGGTCCAACCGG +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEATETPI*FSRSNR
Trigger: CCGGTTGGACCTGCTAAAGCAGATTGGTGTTTCTGT...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGGCCATTACTGGTCACTaGAGGAGGGCGGGCCCATCG +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKAITGH*RRAGPS
Trigger: CGATGGGCCCGCCCTCCTGCAGTGACCAGTAATGGC...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACCTGCTTCCGTGGAATTaGTGGACGTGTGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDLLPWN*WTCVTD
Trigger: GTCGGTCACACACGTCCAGCAATTCCACGGAAGCAG...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGCTGCTTCCGTGGAATTaGTGGACGTGTGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNELLPWN*WTCVTD
Trigger: GTCGGTCACACACGTCCAGCAATTCCACGGAAGCAG...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGCTGCTTCCGTGGAATTaGTGGACGTGTGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQLLPWN*WTCVTD
Trigger: GTCGGTCACACACGTCCAGCAATTCCACGGAAGCAG...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTGAGGTCTCAGGAGTATaGCTTGATGCCTGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACEVSGV*LDACEN
Trigger: ATTCTCACAGGCATCAAGGCATACTCCTGAGACCTC...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTAAAGATGAGAATCTTTaGCACATCCTTGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTKDENL*HILVVT
Trigger: TGTGACCACAAGGATGTGGCAAAGATTCTCATCTTT...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTTGTACTTGTGCAGGGTaGGCAATCCTTCAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACCTCAG*AILQSF
Trigger: AAAGGACTGAAGGATTGCGCACCCTGCACAAGTACA...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCGTCAATCTGTACTTGTaGAGGGTGCGCAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAVNLYL*RVRNPS
Trigger: TGAAGGATTGCGCACCCTGCACAAGTACAGATTGAC...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTATATTCATCCGAGACTaGGCTACCTGCATTGTTCCC +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACIFIRD*ATCIVP
Trigger: GGGAACAATGCAGGTAGCCCAGTCTCGGATGAATAT...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGTCACTGTCACAAGGCTaGAACTGGAAGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQSLSQG*NWKGWG
Trigger: ACCCCAGCCCTTCCAGTTCCAGCCTTGTGACAGTGA...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGTCACTGTCACAAGGCTaGAACTGGAAGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQSLSQG*NWKGWG
Trigger: ACCCCAGCCCTTCCAGTTCCAGCCTTGTGACAGTGA...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTGACTGTGCTCCTCTGTaGTCCCAGTTTCTGATTCTA +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFDCAPL*SQFLIL
Trigger: TAGAATCAGAAACTGGGACCACAGAGGAGCACAGTC...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGCACGTGCCACACGTGTaGCCCATTTTCGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQHVPHV*PIFELP
Trigger: AGGAAGCTCGAAAATGGGCCACACGTGTGGCACGTG...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAGGAGGCTGTTCGAGGTaGGAAACTGTAGGTACTTTT +
Preference number: 4 (lower is better)
Translates to: ARNIQNVGGVYQATQSHIGGCSR*ETVGTF
Trigger: AAAAGTACCTACAGTTTCCCACCTCGAACAGCCTCC...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCGGAGGCTGTTCGAGGTaGGAAACTGTAGGTACTTTT +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAGGCSR*ETVGTF
Trigger: AAAAGTACCTACAGTTTCCCACCTCGAACAGCCTCC...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCCTTCCGTGGAATTGCTaGACGTGTGTGACCGACTGT +
Preference number: 4 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGLPWNC*TCVTDC
Trigger: ACAGTCGGTCACACACGTCCAGCAATTCCACGGAAG...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTTGTAGCAGTAATGGATaGGCAAGCCCATCATCACAC +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFCSSNG*ASPSSH
Trigger: GTGTGATGATGGGCTTGCCCATCCATTACTGCTACA...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTGTGATGAACAAGATGTaGCTACTAGTTCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACVMNKM*LLVQPL
Trigger: GAGGGGCTGAACTAGTAGCCACATCTTGTTCATCAC...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GCACGAAATATTCAAAACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATATCTGGGCCGGTCTGCTaGCTTGGGAATAAAATAATG +
Preference number: 4 (lower is better)
Translates to: ARNIQNVGGVYQATQSHISGPVC*LGNKIM
Trigger: CATTATTTTATTCCCAAGCCAGCAGACCGGCCCAGA...TATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTTCTGGGCCGGTCTGCTaGCTTGGGAATAAAATAATG +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFSGPVC*LGNKIM
Trigger: CATTATTTTATTCCCAAGCCAGCAGACCGGCCCAGA...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGTTCCACCATAGCAGTTaGTCTGGACCAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEFHHSS*SGPATA
Trigger: GGCTGTGGCTGGTCCAGACCAACTGCTATGGTGGAA...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGGAGCGCGCGCGTGTGTaGAAGGAGCGCTTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKERARV*KERLRS
Trigger: GCTTCTTAAGCGCTCCTTTCACACACGCGCGCGCTC...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTGATACAGCAGCTCCATaGCACTCCAGATCATTTAGA +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFDTAAP*HSRSFR
Trigger: TCTAAATGATCTGGAGTGTCATGGAGCTGCTGTATC...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACCTCCAATACGCCCATTaGATTCCCCTTCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDLQYAH*IPLPRS
Trigger: GCTTCTGGGAAGGGGAATTCAATGGGCGTATTGGAG...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGCTCCAATACGCCCATTaGATTCCCCTTCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNELQYAH*IPLPRS
Trigger: GCTTCTGGGAAGGGGAATTCAATGGGCGTATTGGAG...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGTCTGCTGGCCTTCGGTaGTTCTGTGTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWSAGLR*FCVGGG
Trigger: CCCTCCACCTACACAGAATCACCGAAGGCCAGCAGA...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTTCCTGGCTTTCCCTGTaGCACACAGAAGACACTTGT +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILSWLSL*HTEDTC
Trigger: ACAAGTGTCTTCTGTGTGTCACAGGGAAAGCCAGGA...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCCGAGACTGGGCTACCTaGATTGTTCCCTCGAGAAAA +
Preference number: 4 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGRDWAT*IVPSRK
Trigger: TTTTCTCGAGGGAACAATGCAGGTAGCCCAGTCTCG...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTACTAAGTTTAGATTTTaGCTCGATGTCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTTKFRF*LDVSFL
Trigger: GAGAAAGCTGACATCGAGGCAAAATCTAAACTTAGT...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTAAGATAATCATTCCTTaGGTGGGTAGCTTTGGAATT +
Preference number: 4 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTKIIIP*VGSFGI
Trigger: AATTCCAAAGCTACCCACGCAAGGAATGATTATCTT...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CAACTTTATTTCGAGCCTTTACCCAGTCTTCCATATCTCCATCTTCAATCACTTCCAGGGACTGCAGCATaGTCAGGAGGCTGTTCGAGG +
Preference number: 4 (lower is better)
Translates to: QLYFEPLPSLPYLHLQSLPGTAA*SGGCSR
Trigger: CCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGG...AAGTGATTGAAGATGGAGATATGGAAGACTGGGTAAAGGCTCGAAATAAAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR GCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGAAAGCGGCCAGGGACTaGAGCATGCTCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKKAARD*SMLRRL
Trigger: CAGCCTCCTGAGCATGCTGCAGTCCCTGGCCGCTTT...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATCTGCTTCCGTGGAATTaGTGGACGTGTGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHLLPWN*WTCVTD
Trigger: GTCGGTCACACACGTCCAGCAATTCCACGGAAGCAG...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCATGTACTTGTGCAGGGTaGGCAATCCTTCAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSCTCAG*AILQSF
Trigger: AAAGGACTGAAGGATTGCGCACCCTGCACAAGTACA...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTACCTGTGCACTGTGGTaGTGGATTCCATATCCTGGA +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILTCALW*WIPYPG
Trigger: TCCAGGATATGGAATCCAGCACCACAGTGCACAGGT...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCAGACTGTGCTCCTCTGTaGTCCCAGTTTCTGATTCTA +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSDCAPL*SQFLIL
Trigger: TAGAATCAGAAACTGGGACCACAGAGGAGCACAGTC...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGCTTCCGTGGAATTGCTaGACGTGTGTGACCGACTGT +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNELPWNC*TCVTDC
Trigger: ACAGTCGGTCACACACGTCCAGCAATTCCACGGAAG...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGCGAGTTCTGCTTCCGTaGAATTGCTGGACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNERVLLP*NCWTCV
Trigger: CACACACGTCCAGCAATTCCACGGAAGCAGAACTCG...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGGGAGCTCCTCTTATCTaGGCTGGGGTAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKGAPLI*AGVGAA
Trigger: AGCAGCCCCTACCCCAGCCCAGATAAGAGGAGCTCC...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGGTGATTCTGTGTAGGTaGAGGGGGAGCTGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKVILCR*RGSCPD
Trigger: GTCCGGGCAGCTCCCCCTCCACCTACACAGAATCAC...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTTCAATCTTCTCTGCTaGCCTTCGGTGATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAFNLLC*PSVILC
Trigger: ACACAGAATCACCGAAGGCCAGCAGAGAAGATTGAA...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTCCACCATAGCAGTTaGTCTGGACCAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALFHHSS*SGPATA
Trigger: GGCTGTGGCTGGTCCAGACCAACTGCTATGGTGGAA...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGATAGCAGCCTTCTTCTaGCTGAATGTCCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQIAAFF*LNVLPR
Trigger: CCGAGGAAGGACATTCAGTCAGAAGAAGGCTGCTAT...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311172.11
CDS-3UTR TCA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAAGGGCTGGGGTTTGTaGAATACAGCGTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGKGWGL*NTAFSC
Trigger: GCAAGAAAACGCTGTATTTCACAAACCCCAGCCCTT...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR TCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGTGCTCGGCTTTGTTCTaGTACAGCAGCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQCSALF*YSSSMT
Trigger: TGTCATGGAGCTGCTGTATCAGAACAAAGCCGAGCA...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGATTGCTGGACGTGTGTaGCCGACTGTCCAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKIAGRV*PTVQSG
Trigger: GCCGCTTTGGACAGTCGGTCACACACGTCCAGCAAT...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGTCCGTTGAGGCTGCCTaGAACGAGTTCTGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWSVEAA*NEFCFR
Trigger: ACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGA...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGGGGAAGGAGAGATCTaGATCTCTCTCATCCATGGA +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEGEGEI*ISLIHG
Trigger: TCCATGGATGAGAGAGATTCAGATCTCTCCTTCCCC...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGTCGCAGTTTGCCATATaGGGTCTCAGGAGTATGCCT +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQSQFAI*GLRSMP
Trigger: AGGCATACTCCTGAGACCTCATATGGCAAACTGCGA...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTATAGCAGCCTTCTTCTaGCTGAATGTCCTCATATCT +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFIAAFF*LNVLIS
Trigger: AGATATGAGGACATTCAGTCAGAAGAAGGCTGCTAT...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGTTCCTCGGCGGCGGCTaGATGATGCTGAAGGGACAT +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKFLGGG*MMLKGH
Trigger: ATGTCCCTTCAGCATCATGCAGCCGCCGCCGAGGAA...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTCCAAACGGGATACATaGTCCTGTAATCATTCCGAT +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEASKRDT*SCNHSD
Trigger: ATCGGAATGATTACAGGAGCATGTATCCCGTTTGGA...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGCGAGACTGGGCTACCTaGATTGTTCCCTCGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQRDWAT*IVPSRK
Trigger: TTTTCTCGAGGGAACAATGCAGGTAGCCCAGTCTCG...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCAACTGGAATGTGTTCTaGACAGCTTGGCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEANWNVF*TAWHVS
Trigger: AGAAACATGCCAAGCTGTGCAGAACACATTCCAGTT...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGAAGGGCTGGAACTaGTGTCATCGAAAACATCCA +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILQKGWN*CHRKHP
Trigger: TGGATGTTTTCGATGACAGCAGTTCCAGCCCTTCTG...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCAGATAATTTCTTAAGGTaGCAGAAGGGCTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSDNFLR*QKGWNC
Trigger: GCAGTTCCAGCCCTTCTGGCACCTTAAGAAATTATC...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGGACAGGTCGCAGTTTaGCATATGAGGTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHGQVAV*HMRSQE
Trigger: CTCCTGAGACCTCATATGGCAAACTGCGACCTGTCC...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACCTGTCTGGGCCGGTCTaGTGGCTTGGGAATAAAATA +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDLSGPV*WLGNKI
Trigger: TATTTTATTCCCAAGCCAGCAGACCGGCCCAGACAG...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACACCTGTGCACTGTGGTaGTGGATTCCATATCCTGGA +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDTCALW*WIPYPG
Trigger: TCCAGGATATGGAATCCAGCACCACAGTGCACAGGT...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCATATTCATCCGAGACTaGGCTACCTGCATTGTTCCC +
Preference number: 4 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGIFIRD*ATCIVP
Trigger: GGGAACAATGCAGGTAGCCCAGTCTCGGATGAATAT...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTCCATTACTTGGTTCATaGCACTCTTTAGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACPLLGS*HSLAMC
Trigger: ACACATGGCTAAAGAGTGCCATGAACCAAGTAATGG...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ATTATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGTAAAGTGCCATTACTaGTCACTGCAGGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: IIGQEESCAFYPTEGLLQVKCHY*SLQEGG
Trigger: CCCGCCCTCCTGCAGTGACCAGTAATGGCACTTTAC...CTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp GACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATAAGGTGCCAGAAGGGCTaGAACTGCTGTCATCGAAAA +
Preference number: 4 (lower is better)
Translates to: DRRKVVLFILLKAYSRAIRCQKG*NCCHRK
Trigger: TTTTCGATGACAGCAGTTCCAGCCCTTCTGGCACCT...TATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTACGAGTTCTGCTTCCGTaGAATTGCTGGACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALRVLLP*NCWTCV
Trigger: CACACACGTCCAGCAATTCCACGGAAGCAGAACTCG...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTTGTAGCAGTAATGGATaGGCAAGCCCATCATCACAC +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILCSSNG*ASPSSH
Trigger: GTGTGATGATGGGCTTGCCCATCCATTACTGCTACA...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTTTTCTCATAGAAAGCTaGTTTCCTCCACGAGCCACC +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILFLIES*FPPRAT
Trigger: GGTGGCTCGTGGAGGAAACCAGCTTTCTATGAGAAA...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCATGGTCAAAAATCCCATaGGGACATTTGGCGAGCATT +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSWSKIP*GHLASI
Trigger: AATGCTCGCCAAATGTCCCCATGGGATTTTTGACCA...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACCTGACCTGTGCACTGTaGTGCTGGATTCCATATCCT +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDLTCAL*CWIPYP
Trigger: AGGATATGGAATCCAGCACCACAGTGCACAGGTCAG...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
3UTR CAA 72 bp CCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTaGCTCTGTTCAAGAGTCATCATCATGCAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: PGHPVTHNPPCF*LCSRVIIMQRC
Trigger: GCACCTTTGCATGATGATGACTCTTGAACAGAGCAAAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCATCTCTCTTCAGGTATTaGCTAGCCAACTTCTGCATA +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSSLFRY*LANFCI
Trigger: TATGCAGAAGTTGGCTAGTCAATACCTGAAGAGAGA...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACTTCTCTCGTACTGCATaGGCCATCTGTTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDFSRTA*AICSVS
Trigger: TGAGACTGAACAGATGGCTCATGCAGTACGAGAGAA...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGTTCTCTCGTACTGCATaGGCCATCTGTTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQFSRTA*AICSVS
Trigger: TGAGACTGAACAGATGGCTCATGCAGTACGAGAGAA...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCGATACAGCAGCTCCATaGCACTCCAGATCATTTAGA +
Preference number: 4 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGDTAAP*HSRSFR
Trigger: TCTAAATGATCTGGAGTGTCATGGAGCTGCTGTATC...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR TCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATCGCAGTTTGCCATATaGGGTCTCAGGAGTATGCCT +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALSQFAI*GLRSMP
Trigger: AGGCATACTCCTGAGACCTCATATGGCAAACTGCGA...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGGGAGCCAGCCTCTCCTaGAATCCCTCCTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKGASLS*NPSFCF
Trigger: GAAACAGAAGGAGGGATTTCAGGAGAGGCTGGCTCC...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCACAGCCTTCTTCTGACTaGATGTCCTCATATCTTCAA +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSQPSSD*MSSYLQ
Trigger: TTGAAGATATGAGGACATTCAGTCAGAAGAAGGCTG...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGTTAAGAAGCAAGACTTaGCCCGGAGGGAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKLRSKT*PGGSRP
Trigger: TGGCCTGCTCCCTCCGGGGCAAGTCTTGCTTCTTAA...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTGCTTCTCACTGTCCTTaGAGGCTCAGAAATGAAGTT +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILASHCP*RLRNEV
Trigger: AACTTCATTTCTGAGCCTGCAAGGACAGTGAGAAGC...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTTCCTTATTTAGACTGTaGTCCTCTGTGGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILSLFRL*SSVVPV
Trigger: AACTGGGACCACAGAGGAGCACAGTCTAAATAAGGA...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCTCCTTATTTAGACTGTaGTCCTCTGTGGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGSLFRL*SSVVPV
Trigger: AACTGGGACCACAGAGGAGCACAGTCTAAATAAGGA...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGACAGAAACACCAATCTaGTTTAGCAGGTCCAACCGG +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQTETPI*FSRSNR
Trigger: CCGGTTGGACCTGCTAAAGCAGATTGGTGTTTCTGT...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp GCACATAACCCACTTGGCCAACTTTATTTCGAGCCTTTACCCAGTCTTCCATATCAGAAGGGCTGGAACTaGTGTCATCGAAAACATCCA +
Preference number: 4 (lower is better)
Translates to: AHNPLGQLYFEPLPSLPYQKGWN*CHRKHP
Trigger: TGGATGTTTTCGATGACAGCAGTTCCAGCCCTTCTG...ATATGGAAGACTGGGTAAAGGCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR GCA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCGATAATTTCTTAAGGTaGCAGAAGGGCTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGDNFLR*QKGWNC
Trigger: GCAGTTCCAGCCCTTCTGGCACCTTAAGAAATTATC...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGTGGGACCTGGAAGCTaGATTTTCCACCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHVGPGS*IFHHSS
Trigger: ACTGCTATGGTGGAAAATGCAGCTTCCAGGTCCCAC...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACGTCAATCTGTACTTGTaGAGGGTGCGCAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDVNLYL*RVRNPS
Trigger: TGAAGGATTGCGCACCCTGCACAAGTACAGATTGAC...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAACCTGTGCACTGTGGTaGTGGATTCCATATCCTGGA +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALTCALW*WIPYPG
Trigger: TCCAGGATATGGAATCCAGCACCACAGTGCACAGGT...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TGGCACATAACCCACTTGGCCAACTTTATTTCGAGCCTTTACCCAGTCTTCCATGTATCGAGTGTAAAGTaGCATTACTGGTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: WHITHLANFISSLYPVFHVSSVK*HYWSLQ
Trigger: CTGCAGTGACCAGTAATGGCACTTTACACTCGATAC...ATGGAAGACTGGGTAAAGGCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR CCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACATATTCATCCGAGACTaGGCTACCTGCATTGTTCCC +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDIFIRD*ATCIVP
Trigger: GGGAACAATGCAGGTAGCCCAGTCTCGGATGAATAT...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGGACTGTGCTCCTCTGTaGTCCCAGTTTCTGATTCTA +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQDCAPL*SQFLIL
Trigger: TAGAATCAGAAACTGGGACCACAGAGGAGCACAGTC...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGCACGTGCCACACGTGTaGCCCATTTTCGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKHVPHV*PIFELP
Trigger: AGGAAGCTCGAAAATGGGCCACACGTGTGGCACGTG...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATAGGTGCCAGAAGGGCTaGAACTGCTGTCATCGAAAA +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHRCQKG*NCCHRK
Trigger: TTTTCGATGACAGCAGTTCCAGCCCTTCTGGCACCT...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACGGAGGCTGTTCGAGGTaGGAAACTGTAGGTACTTTT +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDGGCSR*ETVGTF
Trigger: AAAAGTACCTACAGTTTCCCACCTCGAACAGCCTCC...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGGAGGCTGTTCGAGGTaGGAAACTGTAGGTACTTTT +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEGGCSR*ETVGTF
Trigger: AAAAGTACCTACAGTTTCCCACCTCGAACAGCCTCC...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATAGGAGGCTGTTCGAGGTaGGAAACTGTAGGTACTTTT +
Preference number: 4 (lower is better)
Translates to: DRRKVVLFILLKAYSRAIGGCSR*ETVGTF
Trigger: AAAAGTACCTACAGTTTCCCACCTCGAACAGCCTCC...TATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp ATTATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGCGAGTTCTGCTTCCGTaGAATTGCTGGACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: IIGQEESCAFYPTEGLLQRVLLP*NCWTCV
Trigger: CACACACGTCCAGCAATTCCACGGAAGCAGAACTCG...CTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGTGTAGCAGTAATGGATaGGCAAGCCCATCATCACAC +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNECSSNG*ASPSSH
Trigger: GTGTGATGATGGGCTTGCCCATCCATTACTGCTACA...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTGAAATATTCAAAACGTaGGAGGAGTCTACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILEIFKT*EESTRP
Trigger: TGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTC...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGGTGATGAACAAGATGTaGCTACTAGTTCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQVMNKM*LLVQPL
Trigger: GAGGGGCTGAACTAGTAGCCACATCTTGTTCATCAC...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCACACTTGTCTTTTCCTaGTCAATCTGTACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: TVRVHMISNLGTVPWNEATLVFS*SICTCA
Trigger: TGCACAAGTACAGATTGACCAGGAAAAGACAAGTGT...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTGACAGAATACAAGACTaGGTGGCAAGAACTGCTCTA +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILDRIQD*VARTAL
Trigger: TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGCTAGCTCAGTCCGGCTaGAGGCTATTAAATAATCCT +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQLAQSG*RLLNNP
Trigger: AGGATTATTTAATAGCCTTCAGCCGGACTGAGCTAG...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACTAGCTCAGTCCGGCTaGAGGCTATTAAATAATCCT +
Preference number: 4 (lower is better)
Translates to: DRRKVVLFILLKAYSRAILAQSG*RLLNNP
Trigger: AGGATTATTTAATAGCCTTCAGCCGGACTGAGCTAG...TATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR TCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAAAGGGCTGGGGTTTGTaGAATACAGCGTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALKGWGL*NTAFSC
Trigger: GCAAGAAAACGCTGTATTTCACAAACCCCAGCCCTT...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGATACAGCAGCTCCATaGCACTCCAGATCATTTAGA +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEDTAAP*HSRSFR
Trigger: TCTAAATGATCTGGAGTGTCATGGAGCTGCTGTATC...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGTGCTCGGCTTTGTTCTaGTACAGCAGCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWCSALF*YSSSMT
Trigger: TGTCATGGAGCTGCTGTATCAGAACAAAGCCGAGCA...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGTTTTGCTCGGCTTTGTTCTaGTACAGCAGCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: RKVVLFILLKAYSRAIQFCSALF*YSSSMT
Trigger: TGTCATGGAGCTGCTGTATCAGAACAAAGCCGAGCA...AAACTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR TCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGGGGGAAGGAGAGATCTaGATCTCTCTCATCCATGGA +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWGEGEI*ISLIHG
Trigger: TCCATGGATGAGAGAGATTCAGATCTCTCCTTCCCC...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTGTAGCCAACATGATCTaGTTAATTCTCAATCAGATG +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFVANMI*LILNQM
Trigger: CATCTGATTGAGAATTAATCAGATCATGTTGGCTAC...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTTTTCAAATAACCCTTTaGGGTTGTGGAAAACCCAAA +
Preference number: 4 (lower is better)
Translates to: VRVHMISNLGTVPWNEACFQITL*GCGKPK
Trigger: TTTGGGTTTTCCACAACCTCAAAGGGTTATTTGAAA...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGTGCTTTTTATCCTACTaGAGGCTTACTCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQCFLSY*RLTPGQ
Trigger: TTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCA...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp GACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATAGCTTCTCACTGTCCTTaGAGGCTCAGAAATGAAGTT +
Preference number: 4 (lower is better)
Translates to: DRRKVVLFILLKAYSRAIASHCP*RLRNEV
Trigger: AACTTCATTTCTGAGCCTGCAAGGACAGTGAGAAGC...TATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGAGCTTTCTCTCGTACTaGATGAGCCATCTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQSFLSY*MSHLFS
Trigger: ACTGAACAGATGGCTCATGCAGTACGAGAGAAAGCT...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATAAGCTTTCTCTCGTACTaGATGAGCCATCTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: DRRKVVLFILLKAYSRAISFLSY*MSHLFS
Trigger: ACTGAACAGATGGCTCATGCAGTACGAGAGAAAGCT...TATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTACTAAGTTTAGATTTTaGCTCGATGTCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: NVGGVYQATQSHIILLVFTKFRF*LDVSFL
Trigger: GAGAAAGCTGACATCGAGGCAAAATCTAAACTTAGT...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTAGTCCCGGACCACCTTaGTGGAGTTTTCTAATAAAA +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILSPGPP*WSFLIK
Trigger: TTTTATTAGAAAACTCCAGCAAGGTGGTCCGGGACT...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAACAGAAACACCAATCTaGTTTAGCAGGTCCAACCGG +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALTETPI*FSRSNR
Trigger: CCGGTTGGACCTGCTAAAGCAGATTGGTGTTTCTGT...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGAGGTCTCAGGAGTATaGCTTGATGCCTGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHEVSGV*LDACEN
Trigger: ATTCTCACAGGCATCAAGGCATACTCCTGAGACCTC...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTAGAGAAGCTCAACAATaGAGGTATGTGTCCTCAACT +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILREAQQ*RYVSST
Trigger: AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCT...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAGTCAATCTGTACTTGTaGAGGGTGCGCAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALVNLYL*RVRNPS
Trigger: TGAAGGATTGCGCACCCTGCACAAGTACAGATTGAC...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGAGGTGCCAGAAGGGCTaGAACTGCTGTCATCGAAAA +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWRCQKG*NCCHRK
Trigger: TTTTCGATGACAGCAGTTCCAGCCCTTCTGGCACCT...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGCCTCATGTTCCTCAATaGTCAACTCATCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEPHVPQ*STHLVE
Trigger: CTCAACCAGATGAGTTGACCATTGAGGAACATGAGG...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGCCTCATGTTCCTCAATaGTCAACTCATCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQPHVPQ*STHLVE
Trigger: CTCAACCAGATGAGTTGACCATTGAGGAACATGAGG...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGCTTCCGTGGAATTGCTaGACGTGTGTGACCGACTGT +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKLPWNC*TCVTDC
Trigger: ACAGTCGGTCACACACGTCCAGCAATTCCACGGAAG...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGTTCAATCTTCTCTGCTaGCCTTCGGTGATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQFNLLC*PSVILC
Trigger: ACACAGAATCACCGAAGGCCAGCAGAGAAGATTGAA...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGGAAATATTCAAAACGTaGGAGGAGTCTACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQEIFKT*EESTRP
Trigger: TGGCCTGGTAGACTCCTCCCACGTTTTGAATATTTC...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAGTGATGAACAAGATGTaGCTACTAGTTCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALVMNKM*LLVQPL
Trigger: GAGGGGCTGAACTAGTAGCCACATCTTGTTCATCAC...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACTGGTCAAAAATCCCATaGGGACATTTGGCGAGCATT +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDWSKIP*GHLASI
Trigger: AATGCTCGCCAAATGTCCCCATGGGATTTTTGACCA...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCAGAATACAAGACTGGGTaGCAAGAACTGCTCTATTTA +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSEYKTG*QELLYL
Trigger: TAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTC...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACGACAGAATACAAGACTaGGTGGCAAGAACTGCTCTA +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDDRIQD*VARTAL
Trigger: TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGTCTCTCTTCAGGTATTaGCTAGCCAACTTCTGCATA +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNESLFRY*LANFCI
Trigger: TATGCAGAAGTTGGCTAGTCAATACCTGAAGAGAGA...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGTCTCTCTTCAGGTATTaGCTAGCCAACTTCTGCATA +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQSLFRY*LANFCI
Trigger: TATGCAGAAGTTGGCTAGTCAATACCTGAAGAGAGA...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR TCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGTTCTCTCGTACTGCATaGGCCATCTGTTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWFSRTA*AICSVS
Trigger: TGAGACTGAACAGATGGCTCATGCAGTACGAGAGAA...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGTTTTTCTCTCGTACTGCATaGGCCATCTGTTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: RKVVLFILLKAYSRAIQFFSRTA*AICSVS
Trigger: TGAGACTGAACAGATGGCTCATGCAGTACGAGAGAA...AAACTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR TCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTACTAGCTCAGTCCGGCTaGAGGCTATTAAATAATCCT +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALLAQSG*RLLNNP
Trigger: AGGATTATTTAATAGCCTTCAGCCGGACTGAGCTAG...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTAGAACCCGTTGTTGGTaGACAATGTTTTTATGCTCA +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILRTRCW*TMFLCS
Trigger: TGAGCATAAAAACATTGTTCACCAACAACGGGTTCT...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAGAACCCGTTGTTGGTaGACAATGTTTTTATGCTCA +
Preference number: 4 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGRTRCW*TMFLCS
Trigger: TGAGCATAAAAACATTGTTCACCAACAACGGGTTCT...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR TCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACCAGCCTTCTTCTGACTaGATGTCCTCATATCTTCAA +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDQPSSD*MSSYLQ
Trigger: TTGAAGATATGAGGACATTCAGTCAGAAGAAGGCTG...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGATAGCAGCCTTCTTCTaGCTGAATGTCCTCATATCT +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEIAAFF*LNVLIS
Trigger: AGATATGAGGACATTCAGTCAGAAGAAGGCTGCTAT...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGCTTCTGCATACCCTGTaGATACTCTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNELLHTL*ILSFNS
Trigger: GCTATTGAAAGAGAGTATGCACAGGGTATGCAGAAG...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACTCCAAACGGGATACATaGTCCTGTAATCATTCCGAT +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDSKRDT*SCNHSD
Trigger: ATCGGAATGATTACAGGAGCATGTATCCCGTTTGGA...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCAACTAAGTTTAGATTTTaGCTCGATGTCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSTKFRF*LDVSFL
Trigger: GAGAAAGCTGACATCGAGGCAAAATCTAAACTTAGT...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGAACTGGAATGTGTTCTaGACAGCTTGGCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNENWNVF*TAWHVS
Trigger: AGAAACATGCCAAGCTGTGCAGAACACATTCCAGTT...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGAGTCCCGGACCACCTTaGTGGAGTTTTCTAATAAAA +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQSPGPP*WSFLIK
Trigger: TTTTATTAGAAAACTCCAGCAAGGTGGTCCGGGACT...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp AGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGTTTGTTTTTATGCTCACGTaGCACACGTGTGGCCCATTT +
Preference number: 4 (lower is better)
Translates to: RKVVLFILLKAYSRAIQFVFMLT*HTCGPF
Trigger: AAATGGGCCACACGTGTGGCACGTGAGCATAAAAAC...AAACTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp TTGGCCAACTTTATTTCGAGCCTTTACCCAGTCTTCCATATCTCCATCTTCAATACAGAAACACCAATCTaGTTTAGCAGGTCCAACCGG +
Preference number: 4 (lower is better)
Translates to: LANFISSLYPVFHISIFNTETPI*FSRSNR
Trigger: CCGGTTGGACCTGCTAAAGCAGATTGGTGTTTCTGT...ATTGAAGATGGAGATATGGAAGACTGGGTAAAGGCTCGAAATAAAGTTGGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR GCA 90 bp AGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGTTTCAGAAGGGCTGGAACTaGTGTCATCGAAAACATCCA +
Preference number: 4 (lower is better)
Translates to: RKVVLFILLKAYSRAIQFQKGWN*CHRKHP
Trigger: TGGATGTTTTCGATGACAGCAGTTCCAGCCCTTCTG...AAACTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTAAAGATGAGAATCTTTaGCACATCCTTGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILKDENL*HILVVT
Trigger: TGTGACCACAAGGATGTGGCAAAGATTCTCATCTTT...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACGTTGTGGAAGAGATGTaGGTTAATGCAATTGGTGCT +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDVVEEM*VNAIGA
Trigger: AGCACCAATTGCATTAACGCACATCTCTTCCACAAC...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACAGAGAAGCTCAACAATaGAGGTATGTGTCCTCAACT +
Preference number: 4 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDREAQQ*RYVSST
Trigger: AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCT...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATATTTAGGGTTCTACTGTaGAGGACAAACGTGACCATA +
Preference number: 4 (lower is better)
Translates to: DRRKVVLFILLKAYSRAIFRVLL*RTNVTI
Trigger: TATGGTCACGTTTGTCCTGCACAGTAGAACCCTAAA...TATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGCCCGGACCACCTTGCTaGAGTTTTCTAATAAAAACT +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQPGPPC*SFLIKT
Trigger: AGTTTTTATTAGAAAACTCCAGCAAGGTGGTCCGGG...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGCCCGGACCACCTTGCTaGAGTTTTCTAATAAAAACT +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQPGPPC*SFLIKT
Trigger: AGTTTTTATTAGAAAACTCCAGCAAGGTGGTCCGGG...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGCCATTACTTGGTTCATaGCACTCTTTAGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQPLLGS*HSLAMC
Trigger: ACACATGGCTAAAGAGTGCCATGAACCAAGTAATGG...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp TGGCACATAACCCACTTGGCCAACTTTATTTCGAGCCTTTACCCAGTCTTCCATAGTTCTTCCATTACTTaGTTCATGGCACTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: WHITHLANFISSLYPVFHSSSIT*FMALFS
Trigger: GCTAAAGAGTGCCATGAACCAAGTAATGGAAGAACT...ATGGAAGACTGGGTAAAGGCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR CCA 90 bp GACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATAAATGGTCAACTCATCTaGTTGAGAAGCCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: DRRKVVLFILLKAYSRAINGQLI*LRSLVG
Trigger: TCCTACAAGGCTTCTCAACCAGATGAGTTGACCATT...TATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGTCCCATGGGGACATTTaGCGAGCATTTCAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQSHGDI*RAFQVF
Trigger: AAAAACTTGAAATGCTCGCCAAATGTCCCCATGGGA...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGTCCCATGGGGACATTTaGCGAGCATTTCAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: YTVRVHMISNLGTVPWNESHGDI*RAFQVF
Trigger: AAAAACTTGAAATGCTCGCCAAATGTCCCCATGGGA...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGTGTGCACTGTGGTGCTaGATTCCATATCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKCALWC*IPYPGW
Trigger: CCATCCAGGATATGGAATCCAGCACCACAGTGCACA...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp CCTTTACCCAGTCTTCCATATCTCCATCTTCAATCACTTCTAACACCTCATGTTGATACAGCAGCTCCATaGCACTCCAGATCATTTAGA +
Preference number: 4 (lower is better)
Translates to: PLPSLPYLHLQSLLTPHVDTAAP*HSRSFR
Trigger: TCTAAATGATCTGGAGTGTCATGGAGCTGCTGTATC...AACATGAGGTGTTAGAAGTGATTGAAGATGGAGATATGGAAGACTGGGTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR TCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTGTAGCCAACATGATCTaGTTAATTCTCAATCAGATG +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILVANMI*LILNQM
Trigger: CATCTGATTGAGAATTAATCAGATCATGTTGGCTAC...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTTTTCAAATAACCCTTTaGGGTTGTGGAAAACCCAAA +
Preference number: 4 (lower is better)
Translates to: KTLVFSWSICTCAGCAILFQITL*GCGKPK
Trigger: TTTGGGTTTTCCACAACCTCAAAGGGTTATTTGAAA...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATAAGTTTAGGTCAAACGTaGCCAAATAAAGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: DRRKVVLFILLKAYSRAISLGQT*PNKECL
Trigger: AAGGCACTCTTTATTTGGTCACGTTTGACCTAAACT...TATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATTCCAAACGGGATACATaGTCCTGTAATCATTCCGAT +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHSKRDT*SCNHSD
Trigger: ATCGGAATGATTACAGGAGCATGTATCCCGTTTGGA...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGGCTTCTCACTGTCCTTaGAGGCTCAGAAATGAAGTT +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWASHCP*RLRNEV
Trigger: AACTTCATTTCTGAGCCTGCAAGGACAGTGAGAAGC...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAAGTCCCGGACCACCTTaGTGGAGTTTTCTAATAAAA +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALSPGPP*WSFLIK
Trigger: TTTTATTAGAAAACTCCAGCAAGGTGGTCCGGGACT...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGTCCTTATTTAGACTGTaGTCCTCTGTGGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWSLFRL*SSVVPV
Trigger: AACTGGGACCACAGAGGAGCACAGTCTAAATAAGGA...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGGTTTTTATGCTCACGTaGCACACGTGTGGCCCATTT +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKVFMLT*HTCGPF
Trigger: AAATGGGCCACACGTGTGGCACGTGAGCATAAAAAC...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGACAGAAACACCAATCTaGTTTAGCAGGTCCAACCGG +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKTETPI*FSRSNR
Trigger: CCGGTTGGACCTGCTAAAGCAGATTGGTGTTTCTGT...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp TCTCCATCTTCAATCACTTCTAACACCTCATGTTCCTCAATGGTCAACTCATCTGATAATTTCTTAAGGTaGCAGAAGGGCTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: SPSSITSNTSCSSMVNSSDNFLR*QKGWNC
Trigger: GCAGTTCCAGCCCTTCTGGCACCTTAAGAAATTATC...AGATGAGTTGACCATTGAGGAACATGAGGTGTTAGAAGTGATTGAAGATGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR CCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATCCCGGACCACCTTGCTaGAGTTTTCTAATAAAAACT +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHPGPPC*SFLIKT
Trigger: AGTTTTTATTAGAAAACTCCAGCAAGGTGGTCCGGG...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TGGGAAACTGTAGGTACTTTTCTGGCACATAACCCACTTGGCCAACTTTATTTCCCATTACTTGGTTCATaGCACTCTTTAGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: WETVGTFLAHNPLGQLYFPLLGS*HSLAMC
Trigger: ACACATGGCTAAAGAGTGCCATGAACCAAGTAATGG...GAAATAAAGTTGGCCAAGTGGGTTATGTGCCAGAAAAGTACCTACAGTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR CCA 90 bp AGTCTTCCATATCTCCATCTTCAATCACTTCTAACACCTCATGTTCCTCAATGGCCTCATGTTCCTCAATaGTCAACTCATCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SLPYLHLQSLLTPHVPQWPHVPQ*STHLVE
Trigger: CTCAACCAGATGAGTTGACCATTGAGGAACATGAGG...CCATTGAGGAACATGAGGTGTTAGAAGTGATTGAAGATGGAGATATGGAAGACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR CCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGTTTCTCATAGAAAGCTaGTTTCCTCCACGAGCCACC +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKFLIES*FPPRAT
Trigger: GGTGGCTCGTGGAGGAAACCAGCTTTCTATGAGAAA...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGTGGTCAAAAATCCCATaGGGACATTTGGCGAGCATT +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWWSKIP*GHLASI
Trigger: AATGCTCGCCAAATGTCCCCATGGGATTTTTGACCA...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCAAAAAACCCCAAATCATaGAGAAGATTCATTAATGGG +
Preference number: 4 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSKNPKS*RRFING
Trigger: CCCATTAATGAATCTTCTCCATGATTTGGGGTTTTT...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGTCAATATCCACCAGTTaGGCGGCTTTTAAACTAGTA +
Preference number: 4 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQSISTS*AAFKLV
Trigger: TACTAGTTTAAAAGCCGCCCAACTGGTGGATATTGA...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409314.5
CDS-3UTR TCA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATAGAACCCGTTGTTGGTaGACAATGTTTTTATGCTCA +
Preference number: 4 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHRTRCW*TMFLCS
Trigger: TGAGCATAAAAACATTGTTCACCAACAACGGGTTCT...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGCCACTTGAAGAAAGATaGGAATCTTTGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWPLEER*ESLPHP
Trigger: AGGATGTGGCAAAGATTCTCATCTTTCTTCAAGTGG...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp AGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGTTTCAGCCTTCTTCTGACTaGATGTCCTCATATCTTCAA +
Preference number: 4 (lower is better)
Translates to: RKVVLFILLKAYSRAIQFQPSSD*MSSYLQ
Trigger: TTGAAGATATGAGGACATTCAGTCAGAAGAAGGCTG...AAACTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR TCA 90 bp AGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGTTTATAGCAGCCTTCTTCTaGCTGAATGTCCTCATATCT +
Preference number: 4 (lower is better)
Translates to: RKVVLFILLKAYSRAIQFIAAFF*LNVLIS
Trigger: AGATATGAGGACATTCAGTCAGAAGAAGGCTGCTAT...AAACTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp AGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGTTTTCCAAACGGGATACATaGTCCTGTAATCATTCCGAT +
Preference number: 4 (lower is better)
Translates to: RKVVLFILLKAYSRAIQFSKRDT*SCNHSD
Trigger: ATCGGAATGATTACAGGAGCATGTATCCCGTTTGGA...AAACTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp GACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATAAAGATAATCATTCCTTaGGTGGGTAGCTTTGGAATT +
Preference number: 4 (lower is better)
Translates to: DRRKVVLFILLKAYSRAIKIIIP*VGSFGI
Trigger: AATTCCAAAGCTACCCACGCAAGGAATGATTATCTT...TATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp AGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGTTTAACTGGAATGTGTTCTaGACAGCTTGGCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: RKVVLFILLKAYSRAIQFNWNVF*TAWHVS
Trigger: AGAAACATGCCAAGCTGTGCAGAACACATTCCAGTT...AAACTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGAGAGAAGCTCAACAATaGAGGTATGTGTCCTCAACT +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWREAQQ*RYVSST
Trigger: AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCT...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCTACAATGGAATACTGTaGATACTCTCTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGYNGIL*ILSFNS
Trigger: GCTATTGAAAGAGAGTATGCACAGTATTCCATTGTA...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGCCATTACTTGGTTCATaGCACTCTTTAGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWPLLGS*HSLAMC
Trigger: ACACATGGCTAAAGAGTGCCATGAACCAAGTAATGG...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp CCTTTACCCAGTCTTCCATATCTCCATCTTCAATCACTTCTAACACCTCATGTTAATGGTCAACTCATCTaGTTGAGAAGCCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: PLPSLPYLHLQSLLTPHVNGQLI*LRSLVG
Trigger: TCCTACAAGGCTTCTCAACCAGATGAGTTGACCATT...AACATGAGGTGTTAGAAGTGATTGAAGATGGAGATATGGAAGACTGGGTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR CCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAACACTTGTCTTTTCCTaGTCAATCTGTACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALTLVFS*SICTCA
Trigger: TGCACAAGTACAGATTGACCAGGAAAAGACAAGTGT...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAGAATACAAGACTGGGTaGCAAGAACTGCTCTATTTA +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALEYKTG*QELLYL
Trigger: TAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTC...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGGGTATATCCATACAATaGAATACTGTGCATACTCTC +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQGISIQ*NTVHTL
Trigger: GAGAGTATGCACAGTATTCCATTGTATGGATATACC...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGCCATCAACAGGAAAATaGATAAACTGTGGTATATCC +
Preference number: 4 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQPSTGK*INCGIS
Trigger: GGATATACCACAGTTTATCCATTTTCCTGTTGATGG...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR TCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGCCACTTGAAGAAAGATaGGAATCTTTGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKPLEER*ESLPHP
Trigger: AGGATGTGGCAAAGATTCTCATCTTTCTTCAAGTGG...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTCAAATAACCCTTTaGGGTTGTGGAAAACCCAAA +
Preference number: 4 (lower is better)
Translates to: TIWLAKDRIQDWVARTALFQITL*GCGKPK
Trigger: TTTGGGTTTTCCACAACCTCAAAGGGTTATTTGAAA...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp ATTATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGTGTGCAGGACAAACGTaGCCATATAAAGAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: IIGQEESCAFYPTEGLLQCAGQT*PYKEKH
Trigger: ATGCTTTTCTTTATATGGTCACGTTTGTCCTGCACA...CTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR GCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGGTTGTGGAAGAGATGTaGGTTAATGCAATTGGTGCT +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKVVEEM*VNAIGA
Trigger: AGCACCAATTGCATTAACGCACATCTCTTCCACAAC...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp ATTATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGAGTTCTTCCATTACTTaGTTCATGGCACTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: IIGQEESCAFYPTEGLLQSSSIT*FMALFS
Trigger: GCTAAAGAGTGCCATGAACCAAGTAATGGAAGAACT...CTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGAATGGTCAACTCATCTaGTTGAGAAGCCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKNGQLI*LRSLVG
Trigger: TCCTACAAGGCTTCTCAACCAGATGAGTTGACCATT...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR TCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGAGAACCCGTTGTTGGTaGACAATGTTTTTATGCTCA +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKRTRCW*TMFLCS
Trigger: TGAGCATAAAAACATTGTTCACCAACAACGGGTTCT...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp ATTATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGACTAAGTTTAGATTTTaGCTCGATGTCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: IIGQEESCAFYPTEGLLQTKFRF*LDVSFL
Trigger: GAGAAAGCTGACATCGAGGCAAAATCTAAACTTAGT...CTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGAGTTCTTCCATTACTTaGTTCATGGCACTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKSSSIT*FMALFS
Trigger: GCTAAAGAGTGCCATGAACCAAGTAATGGAAGAACT...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGGAATACAAGACTGGGTaGCAAGAACTGCTCTATTTA +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKEYKTG*QELLYL
Trigger: TAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTC...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR GCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGAAGCAAATCACATTCTaGTTGATGTTTGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKKQITF*LMFGLK
Trigger: CTTCAAGCCAAACATCAAGCAGAATGTGATTTGCTT...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000409418.9
3UTR CAA 72 bp ACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTaGGATTCTAAGGATACTGGTAAGAAGAGTATATGC +
Preference number: 4 (lower is better)
Translates to: TMQVCVLNLSRH*DSKDTGKKSIC
Trigger: GCATATACTCTTCTTACCAGTATCCTTAGAATCCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CCA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGAAAAACCCCAAATCATaGAGAAGATTCATTAATGGG +
Preference number: 4 (lower is better)
Translates to: DRIQDWVARTALFNKHLKKNPKS*RRFING
Trigger: CCCATTAATGAATCTTCTCCATGATTTGGGGTTTTT...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS TCA 90 bp AGCAGGCCAGCGGGCGGCAGGCGGACCCCAGCCAGAGAGCGAGTGTaGGGAGACGAGGGAGGAGCACCGGGAAGGCTTGGGGCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: SRPAGGRRTPARERV*GDEGGAPGRLGARA
Trigger: CGCCCGGGCCCCAAGCCTTCCCGGTGCTCCTCCCTCGTCTCCTCACACTCGCTCTCTGGCTGGGGTCCGCCTGCCGCCCGCTGGCCTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409418.9
CDS CCA 90 bp GCTGGGAGGCTGGTCGTACAACGGCAGTGGAGGCAGGGAGGCGTGTaGCTTGGGGGAAGGAGAGATCTGAATCTCTCTCATCCATGGAGT +
Preference number: 5 (lower is better)
Translates to: AGRLVVQRQWRQGGV*LGGRRDLNLSHPWS
Trigger: ACTCCATGGATGAGAGAGATTCAGATCTCTCCTTCCCCCAAGCCACACGCCTCCCTGCCTCCACTGCCGTTGTACGACCAGCCTCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS-3UTR CAA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTCTTAAGAAGCAAGACTaGCCCCGGAGGGAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: RALTCALWCWIPYPGWRGLKKQD*PRREQA
Trigger: GGCCTGCTCCCTCCGGGGCAAGTCTTGCTTCTTAAG...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTTTAGCCGCAGCCGCGTaGTCCGCGCTCCCGGTCGGC +
Preference number: 5 (lower is better)
Translates to: NVGGVYQATQSHIILLVFLAAAA*SALPVG
Trigger: GCCGACCGGGAGCGCGGACAACGCGGCTGCGGCTAA...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000409418.9
CDS GCA 90 bp GAATTGCTGGACGTGTGTGACCGACTGTCCAAAGCGGCCAGGGACTaGAGCATGCTCAGGAGGCTGTTCGAGGTGGGAAACTGTAGGTAC +
Preference number: 5 (lower is better)
Translates to: ELLDVCDRLSKAARD*SMLRRLFEVGNCRY
Trigger: GTACCTACAGTTTCCCACCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGGCCGCTTTGGACAGTCGGTCACACACGTCCAGCAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000458644.6
CDS-3UTR CAA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTCTTAAGAAGCAAGACTaGCCCCGGAGGGAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTLKKQD*PRREQA
Trigger: GGCCTGCTCCCTCCGGGGCAAGTCTTGCTTCTTAAG...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTTCTGCTTCCGTGGAATaGCTGGACGTGTGTGACCGA +
Preference number: 5 (lower is better)
Translates to: RALTCALWCWIPYPGWRGSASVE*LDVCDR
Trigger: TCGGTCACACACGTCCAGCAATTCCACGGAAGCAGA...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTCGGACAGGTCGCAGTTaGCCATATGAGGTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: RALTCALWCWIPYPGWRGRTGRS*PYEVSG
Trigger: TCCTGAGACCTCATATGGCAAACTGCGACCTGTCCG...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGCGGACAGGTCGCAGTTaGCCATATGAGGTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: PPSPDLCTVVLDSISWMERTGRS*PYEVSG
Trigger: TCCTGAGACCTCATATGGCAAACTGCGACCTGTCCG...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS GCA 90 bp TGGACGTGTGTGACCGACTGTCCAAAGCGGCCAGGGACTGCAGCATaGTCAGGAGGCTGTTCGAGGTGGGAAACTGTAGGTACTTTTCTG +
Preference number: 5 (lower is better)
Translates to: WTCVTDCPKRPGTAA*SGGCSRWETVGTFL
Trigger: CAGAAAAGTACCTACAGTTTCCCACCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGGCCGCTTTGGACAGTCGGTCACACACGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000458644.6
CDS-3UTR CAA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGTGGCACATAACCCACTaGGCCAACTTTATTTCGAGC +
Preference number: 5 (lower is better)
Translates to: APYLLQERTADSQHLTWGWHITH*ANFISS
Trigger: GCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGCCA...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS TCA 90 bp ACCAGTGTGATTTCCACATCTTCAATCTTCTCTGCTGGCCTTCGGTaGTTCTGTGTAGGTGGAGGGGGAGCTGCCCGGACAGGTCGCAGT +
Preference number: 5 (lower is better)
Translates to: TSVISTSSIFSAGLR*FCVGGGGAARTGRS
Trigger: ACTGCGACCTGTCCGGGCAGCTCCCCCTCCACCTACACAGAATCACCGAAGGCCAGCAGAGAAGATTGAAGATGTGGAAATCACACTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS CCA 90 bp CCAAAGCGGCCAGGGACTGCAGCATGCTCAGGAGGCTGTTCGAGGTaGGAAACTGTAGGTACTTTTCTGGCACATAACCCACTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: PKRPGTAACSGGCSR*ETVGTFLAHNPLGQ
Trigger: TTGGCCAAGTGGGTTATGTGCCAGAAAAGTACCTACAGTTTCCCACCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGGCCGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000458644.6
CDS-3UTR CAA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCGTCTGGGGACTAACCTaGGGGAGGAGCCAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAVWGLT*GRSQPL
Trigger: GAGAGGCTGGCTCCTCCCCAAGGTTAGTCCCCAGAC...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS GCA 90 bp AGCCCATCATCACACCAGTGTGATTTCCACATCTTCAATCTTCTCTaGTGGCCTTCGGTGATTCTGTGTAGGTGGAGGGGGAGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: SPSSHQCDFHIFNLL*WPSVILCRWRGSCP
Trigger: CGGGCAGCTCCCCCTCCACCTACACAGAATCACCGAAGGCCAGCAGAGAAGATTGAAGATGTGGAAATCACACTGGTGTGATGATGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS CCA 90 bp CCATCATCACACCAGTGTGATTTCCACATCTTCAATCTTCTCTGCTaGCCTTCGGTGATTCTGTGTAGGTGGAGGGGGAGCTGCCCGGAC +
Preference number: 5 (lower is better)
Translates to: PSSHQCDFHIFNLLC*PSVILCRWRGSCPD
Trigger: GTCCGGGCAGCTCCCCCTCCACCTACACAGAATCACCGAAGGCCAGCAGAGAAGATTGAAGATGTGGAAATCACACTGGTGTGATGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS-3UTR CAA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTACTGGGCTACCTGCATaGTTCCCTCGAGAAAAGATT +
Preference number: 5 (lower is better)
Translates to: RALTCALWCWIPYPGWRGTGLPA*FPREKI
Trigger: AATCTTTTCTCGAGGGAACAATGCAGGTAGCCCAGT...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCAGTCTGGGGACTAACCTaGGGGAGGAGCCAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSVWGLT*GRSQPL
Trigger: GAGAGGCTGGCTCCTCCCCAAGGTTAGTCCCCAGAC...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp CCTCCGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGATCTCTCTTCAGGTATaGACTAGCCAACTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PPSPDLCTVVLDSISWMEISLQV*TSQLLH
Trigger: ATGCAGAAGTTGGCTAGTCAATACCTGAAGAGAGAT...CTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTCTGCTTCCGTGGAATaGCTGGACGTGTGTGACCGA +
Preference number: 5 (lower is better)
Translates to: TVRVHMISNLGTVPWNEASASVE*LDVCDR
Trigger: TCGGTCACACACGTCCAGCAATTCCACGGAAGCAGA...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCACACTGGCATCTCCGTaGAGGCTGCCTGAAACGAGT +
Preference number: 5 (lower is better)
Translates to: TVRVHMISNLGTVPWNEATLASP*RLPETS
Trigger: ACTCGTTTCAGGCAGCCTCAACGGAGATGCCAGTGT...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp GCTCCCTACCTTCTACAGGAGCGGACAGCAGACAGTCAGCACCTGACGTGGGGGCAAATCACATTCTGCTaGATGTTTGGCTTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: APYLLQERTADSQHLTWGQITFC*MFGLKF
Trigger: AAACTTCAAGCCAAACATCAAGCAGAATGTGATTTG...CCCCCACGTCAGGTGCTGACTGTCTGCTGTCCGCTCCTGTAGAAGGTAGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGCTTAAGAAGCAAGACTaGCCCCGGAGGGAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: YTVRVHMISNLGTVPWNELKKQD*PRREQA
Trigger: GGCCTGCTCCCTCCGGGGCAAGTCTTGCTTCTTAAG...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCACGGACAGGTCGCAGTTaGCCATATGAGGTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSRTGRS*PYEVSG
Trigger: TCCTGAGACCTCATATGGCAAACTGCGACCTGTCCG...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTCTGGTCAATCTGTACTaGTGCAGGGTGCGCAATCCT +
Preference number: 5 (lower is better)
Translates to: VRVHMISNLGTVPWNEACLVNLY*CRVRNP
Trigger: AGGATTGCGCACCCTGCACAAGTACAGATTGACCAG...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCCCACTGGCATCTCCGTaGAGGCTGCCTGAAACGAGT +
Preference number: 5 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGPLASP*RLPETS
Trigger: ACTCGTTTCAGGCAGCCTCAACGGAGATGCCAGTGG...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CAA 90 bp CGAGCCCTGACCTGTGCACTGTGGTGCTGGATTCCATATCCTGGATGGAGGGGTGTTTGGCTTGAAGTTTaGTCATCTGCTCAACTTGAA +
Preference number: 5 (lower is better)
Translates to: RALTCALWCWIPYPGWRGVWLEV*SSAQLE
Trigger: TTCAAGTTGAGCAGATGACAAAACTTCAAGCCAAAC...ACCCCTCCATCCAGGATATGGAATCCAGCACCACAGTGCACAGGTCAGGGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000409418.9
CDS TCA 90 bp CTGATTCTAACTGTCGGCTCTCAGCTATGGTCATTCTCAGAGCACTaGCAGGGGAGAGCTCAATATCCACCAGTTGGGCGGCTTTTAAAC +
Preference number: 5 (lower is better)
Translates to: LILTVGSQLWSFSEH*QGRAQYPPVGRLLN
Trigger: GTTTAAAAGCCGCCCAACTGGTGGATATTGAGCTCTCCCCTGTCAGTGCTCTGAGAATGACCATAGCTGAGAGCCGACAGTTAGAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000458644.6
CDS GCA 90 bp CGTGCCACACGTGTGGCCCATTTTCGAGCTTCCTTATTTAGACTGTaGTCCTCTGTGGTCCCAGTTTCTGATTCTAACTGTCGGCTAGTA +
Preference number: 5 (lower is better)
Translates to: RATRVAHFRASLFRL*SSVVPVSDSNCRLV
Trigger: TACTAGCCGACAGTTAGAATCAGAAACTGGGACCACAGAGGAGCACAGTCTAAATAAGGAAGCTCGAAAATGGGCCACACGTGTGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409418.9
ENST00000409853.5
CDS-3UTR CAA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTCTTGCGTGGGTAGCTTaGGAATTACACTCAGATCGC +
Preference number: 5 (lower is better)
Translates to: NVGGVYQATQSHIILLVFLAWVA*ELHSDR
Trigger: GCGATCTGAGTGTAATTCCAAAGCTACCCACGCAAG...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCTCTGCTTCCGTGGAATaGCTGGACGTGTGTGACCGA +
Preference number: 5 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGSASVE*LDVCDR
Trigger: TCGGTCACACACGTCCAGCAATTCCACGGAAGCAGA...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS CCA 90 bp CCCGTTGTTGGTGAACAATGTTTTTATGCTCACGTGCCACACGTGTaGCCCATTTTCGAGCTTCCTTATTTAGACTGTGCTCCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: PVVGEQCFYAHVPHV*PIFELPYLDCAPLW
Trigger: CCACAGAGGAGCACAGTCTAAATAAGGAAGCTCGAAAATGGGCCACACGTGTGGCACGTGAGCATAAAAACATTGTTCACCAACAACGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000458644.6
CDS CCA 90 bp GACTGGCCAAACTCCAAGCCTGGCCTTGATTGTAGCAGTAATGGATaGGCAAGCCCATCATCACACCAGTGTGATTTCCACATCTTCAAT +
Preference number: 5 (lower is better)
Translates to: DWPNSKPGLDCSSNG*ASPSSHQCDFHIFN
Trigger: ATTGAAGATGTGGAAATCACACTGGTGTGATGATGGGCTTGCCCATCCATTACTGCTACAATCAAGGCCAGGCTTGGAGTTTGGCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS CCA 90 bp GTGTGGCCCATTTTCGAGCTTCCTTATTTAGACTGTGCTCCTCTGTaGTCCCAGTTTCTGATTCTAACTGTCGGCTCTCAGCTATGGTCA +
Preference number: 5 (lower is better)
Translates to: VWPIFELPYLDCAPL*SQFLILTVGSQLWS
Trigger: TGACCATAGCTGAGAGCCGACAGTTAGAATCAGAAACTGGGACCACAGAGGAGCACAGTCTAAATAAGGAAGCTCGAAAATGGGCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000458644.6
CDS-3UTR CAA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTACTGGGCTACCTGCATaGTTCCCTCGAGAAAAGATT +
Preference number: 5 (lower is better)
Translates to: VRVHMISNLGTVPWNEACTGLPA*FPREKI
Trigger: AATCTTTTCTCGAGGGAACAATGCAGGTAGCCCAGT...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGACACTGGCATCTCCGTaGAGGCTGCCTGAAACGAGT +
Preference number: 5 (lower is better)
Translates to: YTVRVHMISNLGTVPWNETLASP*RLPETS
Trigger: ACTCGTTTCAGGCAGCCTCAACGGAGATGCCAGTGT...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGCGGACAGGTCGCAGTTaGCCATATGAGGTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: YTVRVHMISNLGTVPWNERTGRS*PYEVSG
Trigger: TCCTGAGACCTCATATGGCAAACTGCGACCTGTCCG...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCACTCCAAGCCTGGCCTaGATTGTAGCAGTAATGGAT +
Preference number: 5 (lower is better)
Translates to: TVRVHMISNLGTVPWNEATPSLA*IVAVMD
Trigger: ATCCATTACTGCTACAATCAAGGCCAGGCTTGGAGT...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TGCCGGGGCGTCCCCAGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTAATCCTCCTTGTTTTTaGCTCTGTTCAAGAGTCATC +
Preference number: 5 (lower is better)
Translates to: CRGVPSREAQQCRYVSSTNPPCF*LCSRVI
Trigger: GATGACTCTTGAACAGAGCAAAAAACAAGGAGGATT...AGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACTGGGGACGCCCCGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGTCACTGGCATCTCCGTaGAGGCTGCCTGAAACGAGT +
Preference number: 5 (lower is better)
Translates to: YTVRVHMISNLGTVPWNESLASP*RLPETS
Trigger: ACTCGTTTCAGGCAGCCTCAACGGAGATGCCAGTGA...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409263.5
CDS CCA 90 bp GGCGGGCCCATCGCTCATTTTCCAGTTCTTCCATTACTTGGTTCATaGCACTCTTTAGCCATGTGTCCACAGAAACACCAATCTGCTTTA +
Preference number: 5 (lower is better)
Translates to: GGPIAHFPVLPLLGS*HSLAMCPQKHQSAL
Trigger: TAAAGCAGATTGGTGTTTCTGTGGACACATGGCTAAAGAGTGCCATGAACCAAGTAATGGAAGAACTGGAAAATGAGCGATGGGCCCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000432043.2
ENST00000458644.6
CDS-3UTR CAA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCTTGCGTGGGTAGCTTaGGAATTACACTCAGATCGC +
Preference number: 5 (lower is better)
Translates to: KTLVFSWSICTCAGCAILLAWVA*ELHSDR
Trigger: GCGATCTGAGTGTAATTCCAAAGCTACCCACGCAAG...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCCTTGCGTGGGTAGCTTaGGAATTACACTCAGATCGC +
Preference number: 5 (lower is better)
Translates to: IGQEESCAFYPTEGLLQGLAWVA*ELHSDR
Trigger: GCGATCTGAGTGTAATTCCAAAGCTACCCACGCAAG...GCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CAA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCGGTCAACTCATCTGGTaGAGAAGCCTTGTAGGAATA +
Preference number: 5 (lower is better)
Translates to: TVRVHMISNLGTVPWNEAGQLIW*RSLVGI
Trigger: TATTCCTACAAGGCTTCTCAACCAGATGAGTTGACC...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCATGGCACATAACCCACTaGGCCAACTTTATTTCGAGC +
Preference number: 5 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSWHITH*ANFISS
Trigger: GCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGCCA...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATACACTGGCATCTCCGTaGAGGCTGCCTGAAACGAGT +
Preference number: 5 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHTLASP*RLPETS
Trigger: ACTCGTTTCAGGCAGCCTCAACGGAGATGCCAGTGT...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCAACTCCAAGCCTGGCCTaGATTGTAGCAGTAATGGAT +
Preference number: 5 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSTPSLA*IVAVMD
Trigger: ATCCATTACTGCTACAATCAAGGCCAGGCTTGGAGT...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTGCGTTAATGCAATaGGTGCTAAATTCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: TVRVHMISNLGTVPWNEACALMQ*VLNSGQ
Trigger: CTGCCCTGAATTTAGCACCAATTGCATTAACGCACA...GGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACCTGGTCAATCTGTACTaGTGCAGGGTGCGCAATCCT +
Preference number: 5 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDLVNLY*CRVRNP
Trigger: AGGATTGCGCACCCTGCACAAGTACAGATTGACCAG...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGCTGGTCAATCTGTACTaGTGCAGGGTGCGCAATCCT +
Preference number: 5 (lower is better)
Translates to: YTVRVHMISNLGTVPWNELVNLY*CRVRNP
Trigger: AGGATTGCGCACCCTGCACAAGTACAGATTGACCAG...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTATCTCTCTTCAGGTATaGACTAGCCAACTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: VRVHMISNLGTVPWNEACISLQV*TSQLLH
Trigger: ATGCAGAAGTTGGCTAGTCAATACCTGAAGAGAGAT...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCAGGTCAACTCATCTGGTaGAGAAGCCTTGTAGGAATA +
Preference number: 5 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSGQLIW*RSLVGI
Trigger: TATTCCTACAAGGCTTCTCAACCAGATGAGTTGACC...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGTCTGCTTCCGTGGAATaGCTGGACGTGTGTGACCGA +
Preference number: 5 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWSASVE*LDVCDR
Trigger: TCGGTCACACACGTCCAGCAATTCCACGGAAGCAGA...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTACACACAGAAGACACTaGTCTTTTCCTGGTCAATCT +
Preference number: 5 (lower is better)
Translates to: NVGGVYQATQSHIILLVFTHRRH*SFPGQS
Trigger: AGATTGACCAGGAAAAGACAAGTGTCTTCTGTGTGT...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACACTGGGCTACCTGCATaGTTCCCTCGAGAAAAGATT +
Preference number: 5 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDTGLPA*FPREKI
Trigger: AATCTTTTCTCGAGGGAACAATGCAGGTAGCCCAGT...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGACTGGGCTACCTGCATaGTTCCCTCGAGAAAAGATT +
Preference number: 5 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQTGLPA*FPREKI
Trigger: AATCTTTTCTCGAGGGAACAATGCAGGTAGCCCAGT...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CAA 90 bp CTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATGATCAGTGGCACATAACCCACTaGGCCAACTTTATTTCGAGC +
Preference number: 5 (lower is better)
Translates to: LCHILVVTVIYCTSAHDQWHITH*ANFISS
Trigger: GCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGCCA...CTGATCATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGTCTGCTTCCGTGGAATaGCTGGACGTGTGTGACCGA +
Preference number: 5 (lower is better)
Translates to: DRIQDWVARTALFNKHLKSASVE*LDVCDR
Trigger: TCGGTCACACACGTCCAGCAATTCCACGGAAGCAGA...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTTCAAGATACGGATTATaGCTCCCTCAGGAAAAGATA +
Preference number: 5 (lower is better)
Translates to: NVGGVYQATQSHIILLVFSRYGL*LPQEKI
Trigger: TATCTTTTCCTGAGGGAGCAATAATCCGTATCTTGA...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ATTCAGGGCAGTCCAATTTTTCCCAATAAGGTTTCACTTTCTCAGTCTGGGGACACTCCAAGCCTGGCCTaGATTGTAGCAGTAATGGAT +
Preference number: 5 (lower is better)
Translates to: IQGSPIFPNKVSLSQSGDTPSLA*IVAVMD
Trigger: ATCCATTACTGCTACAATCAAGGCCAGGCTTGGAGT...GTCCCCAGACTGAGAAAGTGAAACCTTATTGGGAAAAATTGGACTGCCCTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp GTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGGCCTGTAATCCTCCTTGTTTTTaGCTCTGTTCAAGAGTCATC +
Preference number: 5 (lower is better)
Translates to: VRVHMISNLGTVPWNEACNPPCF*LCSRVI
Trigger: GATGACTCTTGAACAGAGCAAAAAACAAGGAGGATT...ACAGGCCTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS TCA 90 bp TTCCGATCATCAGCTTTTACTCCAGGCCAATCTCTCTTCAGGTATTaGCTAGCCAACTTCTGCATACCATGTCCATCAACAGGAAAATGG +
Preference number: 5 (lower is better)
Translates to: FRSSAFTPGQSLFRY*LANFCIPCPSTGKW
Trigger: CCATTTTCCTGTTGATGGACATGGTATGCAGAAGTTGGCTAGTCAATACCTGAAGAGAGATTGGCCTGGAGTAAAAGCTGATGATCGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CAA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGATTCAGTTTGGATCTTaGTCAACTGGTCCACACACC +
Preference number: 5 (lower is better)
Translates to: YTVRVHMISNLGTVPWNEIQFGS*STGPHT
Trigger: GGTGTGTGGACCAGTTGACAAAGATCCAAACTGAAT...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp AGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGCAATACAGATTCAGTTTGGATCTTaGTCAACTGGTCCACACACC +
Preference number: 5 (lower is better)
Translates to: RRKVVLFILLKAYSRAIQIQFGS*STGPHT
Trigger: GGTGTGTGGACCAGTTGACAAAGATCCAAACTGAAT...CTGTATTGCCCTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CAA 90 bp GCACATAACCCACTTGGCCAACTTTATTTCGAGCCTTTACCCAGTCTTCCATATGGTCAACTCATCTGGTaGAGAAGCCTTGTAGGAATA +
Preference number: 5 (lower is better)
Translates to: AHNPLGQLYFEPLPSLPYGQLIW*RSLVGI
Trigger: TATTCCTACAAGGCTTCTCAACCAGATGAGTTGACC...ATATGGAAGACTGGGTAAAGGCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR CAA 90 bp GAGAATCTTTGCCACATCCTTGTGGTCACAGTAATATACTGTACGAGTGCACATTGGCACATAACCCACTaGGCCAACTTTATTTCGAGC +
Preference number: 5 (lower is better)
Translates to: ENLCHILVVTVIYCTSAHWHITH*ANFISS
Trigger: GCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGCCA...ATGTGCACTCGTACAGTATATTACTGTGACCACAAGGATGTGGCAAAGATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTCAGTCCTTTCTCAAATCCTCCTTGTTTTTaGCTCTGTTCAAGAGTCATC +
Preference number: 5 (lower is better)
Translates to: FPGQSVLVQGAQSFSPFSNPPCF*LCSRVI
Trigger: GATGACTCTTGAACAGAGCAAAAAACAAGGAGGATT...TGAGAAAGGACTGAAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGTGTGCGTTAATGCAATaGGTGCTAAATTCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: YTVRVHMISNLGTVPWNECALMQ*VLNSGQ
Trigger: CTGCCCTGAATTTAGCACCAATTGCATTAACGCACA...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp AAGACACTTGTCTTTTCCTGGTCAATCTGTACTTGTGCAGGGTGCGCAATCCTTACACACAGAAGACACTaGTCTTTTCCTGGTCAATCT +
Preference number: 5 (lower is better)
Translates to: KTLVFSWSICTCAGCAILTHRRH*SFPGQS
Trigger: AGATTGACCAGGAAAAGACAAGTGTCTTCTGTGTGT...AAGGATTGCGCACCCTGCACAAGTACAGATTGACCAGGAAAAGACAAGTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp AACGTGGGAGGAGTCTACCAGGCCACCCAGTCACACATAATCCTCCTTGTTTTTATTTCAAATAACCCTTaGAGGTTGTGGAAAACCCAA +
Preference number: 5 (lower is better)
Translates to: NVGGVYQATQSHIILLVFISNNP*RLWKTQ
Trigger: TTGGGTTTTCCACAACCTCAAAGGGTTATTTGAAAT...AAAAACAAGGAGGATTATGTGTGACTGGGTGGCCTGGTAGACTCCTCCCACGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS TCA 90 bp TTCCGATCATCAGCTTTTACTCCAGGCCAATCTCTCTTCAGGTATTaGCTAGCCAACTTCTGCATACCCTGTGCATACTCTCTTTCAATA +
Preference number: 5 (lower is better)
Translates to: FRSSAFTPGQSLFRY*LANFCIPCAYSLSI
Trigger: TATTGAAAGAGAGTATGCACAGGGTATGCAGAAGTTGGCTAGTCAATACCTGAAGAGAGATTGGCCTGGAGTAAAAGCTGATGATCGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000422375.1
ENST00000458644.6
CDS-3UTR CAA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTAATTCAGTTTGGATCTTaGTCAACTGGTCCACACACC +
Preference number: 5 (lower is better)
Translates to: TIWLAKDRIQDWVARTALIQFGS*STGPHT
Trigger: GGTGTGTGGACCAGTTGACAAAGATCCAAACTGAAT...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGCTTGCGTGGGTAGCTTaGGAATTACACTCAGATCGC +
Preference number: 5 (lower is better)
Translates to: DRIQDWVARTALFNKHLKLAWVA*ELHSDR
Trigger: GCGATCTGAGTGTAATTCCAAAGCTACCCACGCAAG...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ATTATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGTGGCACATAACCCACTaGGCCAACTTTATTTCGAGC +
Preference number: 5 (lower is better)
Translates to: IIGQEESCAFYPTEGLLQWHITH*ANFISS
Trigger: GCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGCCA...CTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CAA 90 bp TCTCCATCTTCAATCACTTCTAACACCTCATGTTCCTCAATGGTCAACTCATCTTGGCACATAACCCACTaGGCCAACTTTATTTCGAGC +
Preference number: 5 (lower is better)
Translates to: SPSSITSNTSCSSMVNSSWHITH*ANFISS
Trigger: GCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGCCA...AGATGAGTTGACCATTGAGGAACATGAGGTGTTAGAAGTGATTGAAGATGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS-3UTR CAA 90 bp TATACTGTACGAGTGCACATGATCAGTAATTTAGGGACTGTGCCCTGGAATGAGACACACAGAAGACACTaGTCTTTTCCTGGTCAATCT +
Preference number: 5 (lower is better)
Translates to: YTVRVHMISNLGTVPWNETHRRH*SFPGQS
Trigger: AGATTGACCAGGAAAAGACAAGTGTCTTCTGTGTGT...CTCATTCCAGGGCACAGTCCCTAAATTACTGATCATGTGCACTCGTACAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ATTATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGGGTCAACTCATCTGGTaGAGAAGCCTTGTAGGAATA +
Preference number: 5 (lower is better)
Translates to: IIGQEESCAFYPTEGLLQGQLIW*RSLVGI
Trigger: TATTCCTACAAGGCTTCTCAACCAGATGAGTTGACC...CTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CAA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGATTCAGTTTGGATCTTaGTCAACTGGTCCACACACC +
Preference number: 5 (lower is better)
Translates to: DRIQDWVARTALFNKHLKIQFGS*STGPHT
Trigger: GGTGTGTGGACCAGTTGACAAAGATCCAAACTGAAT...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ACAATTTGGCTAGCTAAAGACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATCAAGATACGGATTATaGCTCCCTCAGGAAAAGATA +
Preference number: 5 (lower is better)
Translates to: TIWLAKDRIQDWVARTALSRYGL*LPQEKI
Trigger: TATCTTTTCCTGAGGGAGCAATAATCCGTATCTTGA...TAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTCTTTAGCTAGCCAAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGTGTGCGTTAATGCAATaGGTGCTAAATTCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: DRIQDWVARTALFNKHLKCALMQ*VLNSGQ
Trigger: CTGCCCTGAATTTAGCACCAATTGCATTAACGCACA...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp ATTATAGGACAGGAGGAAAGTTGTGCTTTTTATCCTACTGAAGGCTTACTCCAGCAAATAAAGAGTGCCTaGTTTCAGTCTTTACCACTG +
Preference number: 5 (lower is better)
Translates to: IIGQEESCAFYPTEGLLQQIKSA*FQSLPL
Trigger: CAGTGGTAAAGACTGAAACAAGGCACTCTTTATTTG...CTGGAGTAAGCCTTCAGTAGGATAAAAAGCACAACTTTCCTCCTGTCCTATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS-3UTR CAA 90 bp AGTAGAGAAGCTCAACAATGCAGGTATGTGTCCTCAACTTATCTAGACATTTGGATTTCAAATAACCCTTaGAGGTTGTGGAAAACCCAA +
Preference number: 5 (lower is better)
Translates to: SREAQQCRYVSSTYLDIWISNNP*RLWKTQ
Trigger: TTGGGTTTTCCACAACCTCAAAGGGTTATTTGAAAT...CCAAATGTCTAGATAAGTTGAGGACACATACCTGCATTGTTGAGCTTCTCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
CDS-3UTR CAA 90 bp GACAGAATACAAGACTGGGTGGCAAGAACTGCTCTATTTAATAAGCATTTGAAGGTTTGGCTTGAAGTTTaGTCATCTGCTCAACTTGAA +
Preference number: 5 (lower is better)
Translates to: DRIQDWVARTALFNKHLKVWLEV*SSAQLE
Trigger: TTCAAGTTGAGCAGATGACAAAACTTCAAGCCAAAC...CTTCAAATGCTTATTAAATAGAGCAGTTCTTGCCACCCAGTCTTGTATTCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000409418.9
CDS CCA 90 bp TTTTTGCCTTTAGCTAAATCTTTCACTGTCTCTTGTAATTCAGTTTaGATCTTTGTCAACTGGTCCACACACCTTTTTAGTTGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: FLPLAKSFTVSCNSV*IFVNWSTHLFSCCS
Trigger: AGAACAGCAACTAAAAAGGTGTGTGGACCAGTTGACAAAGATCCAAACTGAATTACAAGAGACAGTGAAAGATTTAGCTAAAGGCAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000422375.1
CDS CCA 90 bp TTTTTGCCTTTAGCTAAATCTTTCACTGTCTCTTGTAATTCAGTTTaGATCTTTGTCAACTGGTCCACACACTGTAATCATTCCGATCAT +
Preference number: 5 (lower is better)
Translates to: FLPLAKSFTVSCNSV*IFVNWSTHCNHSDH
Trigger: ATGATCGGAATGATTACAGTGTGTGGACCAGTTGACAAAGATCCAAACTGAATTACAAGAGACAGTGAAAGATTTAGCTAAAGGCAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458644.6
CDS TCA 72 bp GCGGGCGGCAGGCGGACCCCAGCCAGAGAGCGAGTGTaGGGAGACGAGGGAGGAGCACCGGGAAGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: AGGRRTPARERV*GDEGGAPGRLG
Trigger: CCCAAGCCTTCCCGGTGCTCCTCCCTCGTCTCCTCACACTCGCTCTCTGGCTGGGGTCCGCCTGCCGCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409418.9
CDS CCA 72 bp GTAGGGGCTGCTGGGAGGCTGGTCGTACAACGGCAGTaGAGGCAGGGAGGCGTGTGGCTTGGGGGAAGGAGA +
Preference number: 6 (lower is better)
Translates to: VGAAGRLVVQRQ*RQGGVWLGGRR
Trigger: TCTCCTTCCCCCAAGCCACACGCCTCCCTGCCTCCACTGCCGTTGTACGACCAGCCTCCCAGCAGCCCCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS TCA 72 bp GTAACTTTCACCTCCCGGGCCCGGTCCTCGCTTTTCTaGAGACAGCACGACAGCCTCCTCGCCCCTCAGCCG +
Preference number: 6 (lower is better)
Translates to: VTFTSRARSSLF*RQHDSLLAPQP
Trigger: CGGCTGAGGGGCGAGGAGGCTGTCGTGCTGTCTTCAGAAAAGCGAGGACCGGGCCCGGGAGGTGAAAGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422375.1
CDS GCA 72 bp GACGTGTGTGACCGACTGTCCAAAGCGGCCAGGGACTaGAGCATGCTCAGGAGGCTGTTCGAGGTGGGAAAC +
Preference number: 6 (lower is better)
Translates to: DVCDRLSKAARD*SMLRRLFEVGN
Trigger: GTTTCCCACCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGGCCGCTTTGGACAGTCGGTCACACACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000458644.6
CDS GCA 72 bp GTGACCGACTGTCCAAAGCGGCCAGGGACTGCAGCATaGTCAGGAGGCTGTTCGAGGTGGGAAACTGTAGGT +
Preference number: 6 (lower is better)
Translates to: VTDCPKRPGTAA*SGGCSRWETVG
Trigger: ACCTACAGTTTCCCACCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGGCCGCTTTGGACAGTCGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000458644.6
CDS CCA 72 bp AATCTTCTCTGCTGGCCTTCGGTGATTCTGTGTAGGTaGAGGGGGAGCTGCCCGGACAGGTCGCAGTTTGCC +
Preference number: 6 (lower is better)
Translates to: NLLCWPSVILCR*RGSCPDRSQFA
Trigger: GGCAAACTGCGACCTGTCCGGGCAGCTCCCCCTCCACCTACACAGAATCACCGAAGGCCAGCAGAGAAGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS CAA 90 bp GCATCTCCGTTGAGGCTGCCTGAAACGAGTTCTGCTTCCGTGGAATaGCTGGACGTGTGTGACCGACTGTCCAAAGCGGCCAGGGACTGC +
Preference number: 6 (lower is better)
Translates to: ASPLRLPETSSASVE*LDVCDRLSKAARDC
Trigger: GCAGTCCCTGGCCGCTTTGGACAGTCGGTCACACACGTCCAGCAATTCCACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGAGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000458644.6
CDS TCA 72 bp AACGAGTTCTGCTTCCGTGGAATTGCTGGACGTGTGTaGCCGACTGTCCAAAGCGGCCAGGGACTGCAGCAT +
Preference number: 6 (lower is better)
Translates to: NEFCFRGIAGRV*PTVQSGQGLQH
Trigger: ATGCTGCAGTCCCTGGCCGCTTTGGACAGTCGGTCACACACGTCCAGCAATTCCACGGAAGCAGAACTCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000458644.6
CDS CAA 72 bp TTGAGGCTGCCTGAAACGAGTTCTGCTTCCGTGGAATaGCTGGACGTGTGTGACCGACTGTCCAAAGCGGCC +
Preference number: 6 (lower is better)
Translates to: LRLPETSSASVE*LDVCDRLSKAA
Trigger: GGCCGCTTTGGACAGTCGGTCACACACGTCCAGCAATTCCACGGAAGCAGAACTCGTTTCAGGCAGCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000458644.6
CDS CAA 72 bp GTGGCTTGGGGGAAGGAGAGATCACTGGCATCTCCGTaGAGGCTGCCTGAAACGAGTTCTGCTTCCGTGGAA +
Preference number: 6 (lower is better)
Translates to: VAWGKERSLASP*RLPETSSASVE
Trigger: TTCCACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGAGATGCCAGTGATCTCTCCTTCCCCCAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409263.5
CDS TCA 72 bp ACTGTCGGCTCTCAGCTATGGTCATTCTCAGAGCACTaGCAGGGGAGAGCTCAATATCCACCAGTTGGGCGG +
Preference number: 6 (lower is better)
Translates to: TVGSQLWSFSEH*QGRAQYPPVGR
Trigger: CCGCCCAACTGGTGGATATTGAGCTCTCCCCTGTCAGTGCTCTGAGAATGACCATAGCTGAGAGCCGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000458644.6
CDS GCA 72 bp AGTTCTTGTGTAACTTTCACCTTCCTCGGCGGCGGCTaGATGATGCTGAAGGGACATCAATCCTCCCCGACG +
Preference number: 6 (lower is better)
Translates to: SSCVTFTFLGGG*MMLKGHQSSPT
Trigger: CGTCGGGGAGGATTGATGTCCCTTCAGCATCATGCAGCCGCCGCCGAGGAAGGTGAAAGTTACACAAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS TCA 72 bp ATTTCCACATCTTCAATCTTCTCTGCTGGCCTTCGGTaGTTCTGTGTAGGTGGAGGGGGAGCTGCCCGGACA +
Preference number: 6 (lower is better)
Translates to: ISTSSIFSAGLR*FCVGGGGAART
Trigger: TGTCCGGGCAGCTCCCCCTCCACCTACACAGAATCACCGAAGGCCAGCAGAGAAGATTGAAGATGTGGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS TCA 72 bp GAAGGAGAGATCACTGGCATCTCCGTTGAGGCTGCCTaGAACGAGTTCTGCTTCCGTGGAATTGCTGGACGT +
Preference number: 6 (lower is better)
Translates to: EGEITGISVEAA*NEFCFRGIAGR
Trigger: ACGTCCAGCAATTCCACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGAGATGCCAGTGATCTCTCCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409263.5
CDS TCA 72 bp TCAGTCTTTACCACTGGCATCTCCGTTGAGGCTGCCTaGAACGAGTTCTGCTTCCGTGGAATTGCTGGACGT +
Preference number: 6 (lower is better)
Translates to: SVFTTGISVEAA*NEFCFRGIAGR
Trigger: ACGTCCAGCAATTCCACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGAGATGCCAGTGGTAAAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS CCA 72 bp CACCAGTGTGATTTCCACATCTTCAATCTTCTCTGCTaGCCTTCGGTGATTCTGTGTAGGTGGAGGGGGAGC +
Preference number: 6 (lower is better)
Translates to: HQCDFHIFNLLC*PSVILCRWRGS
Trigger: GCTCCCCCTCCACCTACACAGAATCACCGAAGGCCAGCAGAGAAGATTGAAGATGTGGAAATCACACTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS TCA 72 bp CACAAAACATACACTGGCATCTCCGTTGAGGCTGCCTaGAACGAGTTCTGCTTCCGTGGAATTGCTGGACGT +
Preference number: 6 (lower is better)
Translates to: HKTYTGISVEAA*NEFCFRGIAGR
Trigger: ACGTCCAGCAATTCCACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGAGATGCCAGTGTATGTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS GCA 72 bp ACAGGTCGCAGTTTGCCATATGAGGTCTCAGGAGTATaGCTTGATGCCTGTGAGAATCCTGGTGACTCAGCA +
Preference number: 6 (lower is better)
Translates to: TGRSLPYEVSGV*LDACENPGDSA
Trigger: TGCTGAGTCACCAGGATTCTCACAGGCATCAAGGCATACTCCTGAGACCTCATATGGCAAACTGCGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS CCA 72 bp TCTTCTCTTTCGGTATCGAGTGTAAAGTGCCATTACTaGTCACTGCAGGAGGGCGGGCCCATCGCTCATTTT +
Preference number: 6 (lower is better)
Translates to: SSLSVSSVKCHY*SLQEGGPIAHF
Trigger: AAAATGAGCGATGGGCCCGCCCTCCTGCAGTGACCAGTAATGGCACTTTACACTCGATACCGAAAGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432043.2
CDS CAA 72 bp AGTGCCTTGTTTCAGTCTTTACCACTGGCATCTCCGTaGAGGCTGCCTGAAACGAGTTCTGCTTCCGTGGAA +
Preference number: 6 (lower is better)
Translates to: SALFQSLPLASP*RLPETSSASVE
Trigger: TTCCACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGAGATGCCAGTGGTAAAGACTGAAACAAGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS CCA 72 bp AACTCCAAGCCTGGCCTTGATTGTAGCAGTAATGGATaGGCAAGCCCATCATCACACCAGTGTGATTTCCAC +
Preference number: 6 (lower is better)
Translates to: NSKPGLDCSSNG*ASPSSHQCDFH
Trigger: GTGGAAATCACACTGGTGTGATGATGGGCTTGCCCATCCATTACTGCTACAATCAAGGCCAGGCTTGGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
CDS CAA 72 bp GTCGCAGTTTGCCATATGAGGTCTCAGGAGTATGCCTaGATGCCTGTGAGAATCCTGGTGACTCAGCATGAA +
Preference number: 6 (lower is better)
Translates to: VAVCHMRSQEYA*MPVRILVTQHE
Trigger: TTCATGCTGAGTCACCAGGATTCTCACAGGCATCAAGGCATACTCCTGAGACCTCATATGGCAAACTGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409263.5
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS CAA 90 bp CAAATAAAGAGTGCCTTGTTTCAGTCTTTACCACTGGCATCTCCGTaGAGGCTGCCTGAAACGAGTTCTGCTTCCGTGGAATTGCTGGAC +
Preference number: 6 (lower is better)
Translates to: QIKSALFQSLPLASP*RLPETSSASVELLD
Trigger: GTCCAGCAATTCCACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGAGATGCCAGTGGTAAAGACTGAAACAAGGCACTCTTTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS TCA 72 bp TCAGCTTTTACTCCAGGCCAATCTCTCTTCAGGTATTaGCTAGCCAACTTCTGCATACCCTGTGCATACTCT +
Preference number: 6 (lower is better)
Translates to: SAFTPGQSLFRY*LANFCIPCAYS
Trigger: AGAGTATGCACAGGGTATGCAGAAGTTGGCTAGTCAATACCTGAAGAGAGATTGGCCTGGAGTAAAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000422375.1
ENST00000458644.6
CDS GCA 72 bp AACCCGTTGTTGGTGAACAATGTTTTTATGCTCACGTaGCACACGTGTGGCCCATTTTCGAGCTTCCTTATT +
Preference number: 6 (lower is better)
Translates to: NPLLVNNVFMLT*HTCGPFSSFLI
Trigger: AATAAGGAAGCTCGAAAATGGGCCACACGTGTGGCACGTGAGCATAAAAACATTGTTCACCAACAACGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000458644.6
CDS CCA 72 bp GGTGAACAATGTTTTTATGCTCACGTGCCACACGTGTaGCCCATTTTCGAGCTTCCTTATTTAGACTGTGCT +
Preference number: 6 (lower is better)
Translates to: GEQCFYAHVPHV*PIFELPYLDCA
Trigger: AGCACAGTCTAAATAAGGAAGCTCGAAAATGGGCCACACGTGTGGCACGTGAGCATAAAAACATTGTTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000458644.6
CDS CCA 72 bp ATTTTCGAGCTTCCTTATTTAGACTGTGCTCCTCTGTaGTCCCAGTTTCTGATTCTAACTGTCGGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: IFELPYLDCAPL*SQFLILTVGSQ
Trigger: CTGAGAGCCGACAGTTAGAATCAGAAACTGGGACCACAGAGGAGCACAGTCTAAATAAGGAAGCTCGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409314.5
ENST00000458644.6
CDS TCA 72 bp TCAGCTTTTACTCCAGGCCAATCTCTCTTCAGGTATTaGCTAGCCAACTTCTGCATACCATGTCCATCAACA +
Preference number: 6 (lower is better)
Translates to: SAFTPGQSLFRY*LANFCIPCPST
Trigger: TGTTGATGGACATGGTATGCAGAAGTTGGCTAGTCAATACCTGAAGAGAGATTGGCCTGGAGTAAAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS CAA 90 bp TCCAATACGCCCATTGAATTCCCCTTCCCAGAAGCCATCATCATCTaGGTTTTCTTTGTTCAAGATACGGATTATTGCTCCCTCAGGAAA +
Preference number: 6 (lower is better)
Translates to: SNTPIEFPFPEAIII*VFFVQDTDYCSLRK
Trigger: TTTCCTGAGGGAGCAATAATCCGTATCTTGAACAAAGAAAACCAAGATGATGATGGCTTCTGGGAAGGGGAATTCAATGGGCGTATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS CAA 90 bp ACATTCTGCTTGATGTTTGGCTTGAAGTTTTGTCATCTGCTCAACTaGAATGTTTTTCAGTTCTTGTGTAACTTTCACCTCCCGGGCCCG +
Preference number: 6 (lower is better)
Translates to: TFCLMFGLKFCHLLN*NVFQFLCNFHLPGP
Trigger: CGGGCCCGGGAGGTGAAAGTTACACAAGAACTGAAAAACATTCAAGTTGAGCAGATGACAAAACTTCAAGCCAAACATCAAGCAGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422375.1
CDS TCA 72 bp AGGCTTACTCCAGGGCAATACAGTTTAGGTCAAACGTaGCCAAATAAAGAGTGCCTTGTTTCAGTCTTTACC +
Preference number: 6 (lower is better)
Translates to: RLTPGQYSLGQT*PNKECLVSVFT
Trigger: GGTAAAGACTGAAACAAGGCACTCTTTATTTGGTCACGTTTGACCTAAACTGTATTGCCCTGGAGTAAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409853.5
CDS CCA 72 bp ATCGCTCATTTTCCAGTTCTTCCATTACTTGGTTCATaGCACTCTTTAGCCATGTGTCCACAGAAACACCAA +
Preference number: 6 (lower is better)
Translates to: IAHFPVLPLLGS*HSLAMCPQKHQ
Trigger: TTGGTGTTTCTGTGGACACATGGCTAAAGAGTGCCATGAACCAAGTAATGGAAGAACTGGAAAATGAGCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000432043.2
ENST00000458644.6
CDS CAA 72 bp TTTCACATATATTCATCCGAGACTGGGCTACCTGCATaGTTCCCTCGAGAAAAGATTTCCAAACGGGATACA +
Preference number: 6 (lower is better)
Translates to: FHIYSSETGLPA*FPREKISKRDT
Trigger: TGTATCCCGTTTGGAAATCTTTTCTCGAGGGAACAATGCAGGTAGCCCAGTCTCGGATGAATATATGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000422375.1
CDS GCA 72 bp GTGGATAATTTCTTAAGGTGCCAGAAGGGCTGGAACTaGTGTCATCGAAAACATCCATGTTATCTTCAAACT +
Preference number: 6 (lower is better)
Translates to: VDNFLRCQKGWN*CHRKHPCYLQT
Trigger: AGTTTGAAGATAACATGGATGTTTTCGATGACAGCAGTTCCAGCCCTTCTGGCACCTTAAGAAATTATCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000432043.2
ENST00000458644.6
CDS CAA 90 bp AGAAGCCATCATCATCTTGGTTTTCTTTGTTCAAGATACGGATTATaGCTCCCTCAGGAAAAGATAACTCATCATCTGTCTGGCCCTCAT +
Preference number: 6 (lower is better)
Translates to: RSHHHLGFLCSRYGL*LPQEKITHHLSGPH
Trigger: ATGAGGGCCAGACAGATGATGAGTTATCTTTTCCTGAGGGAGCAATAATCCGTATCTTGAACAAAGAAAACCAAGATGATGATGGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS CAA 90 bp ACATTCTGCTTGATGTTTGGCTTGAAGTTTTGTCATCTGCTCAACTaGAATGTTTTTCAGTTCTTGTGTAACTTTCACCTTCCTCGGCGG +
Preference number: 6 (lower is better)
Translates to: TFCLMFGLKFCHLLN*NVFQFLCNFHLPRR
Trigger: CCGCCGAGGAAGGTGAAAGTTACACAAGAACTGAAAAACATTCAAGTTGAGCAGATGACAAAACTTCAAGCCAAACATCAAGCAGAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS GCA 72 bp TTTAGATTTTGCCTCGATGTCAGCTTTCTCTCGTACTaGATGAGCCATCTGTTCAGTCTCAAAGTATTTCTT +
Preference number: 6 (lower is better)
Translates to: FRFCLDVSFLSY*MSHLFSLKVFL
Trigger: AAGAAATACTTTGAGACTGAACAGATGGCTCATGCAGTACGAGAGAAAGCTGACATCGAGGCAAAATCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000458644.6
CDS CAA 72 bp GAATGTCCTCATATCTTCAAGCAAATCACATTCTGCTaGATGTTTGGCTTGAAGTTTTGTCATCTGCTCAAC +
Preference number: 6 (lower is better)
Translates to: ECPHIFKQITFC*MFGLKFCHLLN
Trigger: GTTGAGCAGATGACAAAACTTCAAGCCAAACATCAAGCAGAATGTGATTTGCTTGAAGATATGAGGACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409314.5
ENST00000409418.9
ENST00000422375.1
ENST00000458644.6
CDS CAA 90 bp CTTCTGACTGAATGTCCTCATATCTTCAAGCAAATCACATTCTGCTaGATGTTTGGCTTGAAGTTTTGTCATCTGCTCAACTTGAATGTT +
Preference number: 6 (lower is better)
Translates to: LLTECPHIFKQITFC*MFGLKFCHLLNLNV
Trigger: AACATTCAAGTTGAGCAGATGACAAAACTTCAAGCCAAACATCAAGCAGAATGTGATTTGCTTGAAGATATGAGGACATTCAGTCAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409314.5
ENST00000409418.9
ENST00000422375.1
ENST00000458644.6
CDS CAA 72 bp AATCTTTCACTGTCTCTTGTAATTCAGTTTGGATCTTaGTCAACTGGTCCACACACCTTTTTAGTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: NLSLSLVIQFGS*STGPHTFLVAV
Trigger: AACAGCAACTAAAAAGGTGTGTGGACCAGTTGACAAAGATCCAAACTGAATTACAAGAGACAGTGAAAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000409853.5
ENST00000422375.1
CDS CAA 72 bp CATCATCTTGGTTTTCTTTGTTCAAGATACGGATTATaGCTCCCTCAGGAAAAGATAACTCATCATCTGTCT +
Preference number: 6 (lower is better)
Translates to: HHLGFLCSRYGL*LPQEKITHHLS
Trigger: AGACAGATGATGAGTTATCTTTTCCTGAGGGAGCAATAATCCGTATCTTGAACAAAGAAAACCAAGATGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311172.11
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6
CDS CAA 72 bp GCAAATCACATTCTGCTTGATGTTTGGCTTGAAGTTTaGTCATCTGCTCAACTTGAATGTTTTTCAGTTCTT +
Preference number: 6 (lower is better)
Translates to: ANHILLDVWLEV*SSAQLECFSVL
Trigger: AAGAACTGAAAAACATTCAAGTTGAGCAGATGACAAAACTTCAAGCCAAACATCAAGCAGAATGTGATTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409314.5
ENST00000409418.9
ENST00000422375.1
ENST00000458644.6
CDS CAA 72 bp TTGATGTTTGGCTTGAAGTTTTGTCATCTGCTCAACTaGAATGTTTTTCAGTTCTTGTGTAACTTTCACCTC +
Preference number: 6 (lower is better)
Translates to: LMFGLKFCHLLN*NVFQFLCNFHL
Trigger: GAGGTGAAAGTTACACAAGAACTGAAAAACATTCAAGTTGAGCAGATGACAAAACTTCAAGCCAAACATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422375.1
CDS CAA 72 bp TTGATGTTTGGCTTGAAGTTTTGTCATCTGCTCAACTaGAATGTTTTTCAGTTCTTGTGTAACTTTCACCTT +
Preference number: 6 (lower is better)
Translates to: LMFGLKFCHLLN*NVFQFLCNFHL
Trigger: AAGGTGAAAGTTACACAAGAACTGAAAAACATTCAAGTTGAGCAGATGACAAAACTTCAAGCCAAACATCAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409314.5
ENST00000409418.9
ENST00000458644.6