RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FCER2 (Homo sapiens)

Ensembl gene IDs: ENSG00000104921

Ensembl transcript IDs: ENST00000346664.9, ENST00000360067.8, ENST00000593418.1, ENST00000597312.5, ENST00000597921.6, ENST00000597934.1, ENST00000598803.5

Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTaGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGC +
Preference number: 1 (lower is better)
Translates to: GRGHRGAGDVSAASV*VAENVTGTFQPQRG
Trigger: GCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR CCA 90 bp GGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTaGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTT +
Preference number: 1 (lower is better)
Translates to: GAIEEREMCQLPPFG*QKMSQGPFSHKEAF
Trigger: AAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR GCA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTGGGTCTTCAGGGTCTTaGTCTGGGCCTGGCTGTATC +
Preference number: 2 (lower is better)
Translates to: AGQEDSPPELGILRSWGAGSSGS*SGPGCI
Trigger: GATACAGCCAGGCCCAGAGCAAGACCCTGAAGACCC...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR GCA 90 bp AGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTGAGGAGATGGGGCTaGATCTGGAGAGGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: RLDRRTHHLSWGYSGPGVLRRWG*IWRGCC
Trigger: ACAGCACCCTCTCCAGATGCAGCCCCATCTCCTCAG...CACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR GCA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCGGGTCTTCAGGGTCTTaGTCTGGGCCTGGCTGTATC +
Preference number: 2 (lower is better)
Translates to: LMQAGQEDSPPELGILRSGSSGS*SGPGCI
Trigger: GATACAGCCAGGCCCAGAGCAAGACCCTGAAGACCC...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR CCA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTCTGCCTCCGTTTGGGTaGCAGAAAATGTCACAGGGA +
Preference number: 2 (lower is better)
Translates to: AGQEDSPPELGILRSWGALPPFG*QKMSQG
Trigger: TCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAG...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR CCA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCCTTTTAGGCCGTGGTTaGGGGTCTTCAGGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: LMQAGQEDSPPELGILRSLLGRG*GSSGSC
Trigger: GCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAG...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR CCA 90 bp AGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGTTCAGGGTCTTGCTCTaGGCCTGGCTGTATCCATGC +
Preference number: 2 (lower is better)
Translates to: RSGRCVSCLRLGGRKCHRFRVLL*AWLYPC
Trigger: GCATGGATACAGCCAGGCCCAGAGCAAGACCCTGAA...CCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR CCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGCTTTTAGGCCGTGGTTaGGGGTCTTCAGGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMLLGRG*GSSGSC
Trigger: GCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAG...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR CCA 90 bp AGGCCATCACTGCCCCATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCGAGGCTTTTAGGCCGTaGTTGGGGGTCTTCAGGGTC +
Preference number: 2 (lower is better)
Translates to: RPSLPHFIDAGWTGGLTTEAFRP*LGVFRV
Trigger: GACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTC...GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTGATGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR CCA 90 bp AGGCCATCACTGCCCCATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCAGATGGGGCTGCATCTaGAGAGGGTGCTGTTGGGGT +
Preference number: 2 (lower is better)
Translates to: RPSLPHFIDAGWTGGLTTRWGCI*RGCCWG
Trigger: ACCCCAACAGCACCCTCTCCAGATGCAGCCCCATCT...GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTGATGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR CCA 90 bp ATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCGTTGGGGTGTACTCCTaGGAAGGCAGGGGCCATAGA +
Preference number: 2 (lower is better)
Translates to: ILLMQAGQEDSPPELGILVGVYS*EGRGHR
Trigger: TCTATGGCCCCTGCCTTCCCAGGAGTACACCCCAAC...GAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR CCA 90 bp CCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTTTCAGGGTCTTGCTCTaGGCCTGGCTGTATCCATGC +
Preference number: 2 (lower is better)
Translates to: PFGWQKMSQGPFSHKEAFFRVLL*AWLYPC
Trigger: GCATGGATACAGCCAGGCCCAGAGCAAGACCCTGAA...AAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR CAA 90 bp GGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGGCTTTTAGGCCGTGGTaGGGGGTCTTCAGGGTCTTG +
Preference number: 3 (lower is better)
Translates to: GKAGAIEEREMCQLPPFGAFRPW*GVFRVL
Trigger: CAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGC...CCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR CAA 90 bp CCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGCTTTTAGGCCGTGGTaGGGGGTCTTCAGGGTCTTG +
Preference number: 3 (lower is better)
Translates to: PGKAGAIEEREMCQLPPFAFRPW*GVFRVL
Trigger: CAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGC...AAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR CAA 90 bp AGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGGTCAGCTGCCTCCGTTaGGGTGGCAGAAAATGTCAC +
Preference number: 3 (lower is better)
Translates to: RLDRRTHHLSWGYSGPGVVSCLR*GGRKCH
Trigger: GTGACATTTTCTGCCACCCAAACGGAGGCAGCTGAC...CACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR-3UTR CAA 90 bp AGGCCATCACTGCCCCATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCGCTTTTAGGCCGTGGTaGGGGGTCTTCAGGGTCTTG +
Preference number: 3 (lower is better)
Translates to: RPSLPHFIDAGWTGGLTTAFRPW*GVFRVL
Trigger: CAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGC...GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTGATGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR TCA 72 bp GGACAAATGTGGGAGGCCATCACTGCCCCATTTTATTaGTGCAGGCTGGACAGGAGGACTCACCACCTGAGC +
Preference number: 3 (lower is better)
Translates to: GQMWEAITAPFY*CRLDRRTHHLS
Trigger: GCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTGATGGCCTCCCACATTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360067.8
3UTR CCA 72 bp GAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTaGCAGAAAATGTCACAGGGACCTTTCAGCCACAAA +
Preference number: 3 (lower is better)
Translates to: EEREMCQLPPFG*QKMSQGPFSHK
Trigger: TTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp CCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGAGGGGCAGAGGGGGTaGGCAGGCGGCCGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PGKAGAIEEREMCQLPPFEGQRG*AGGRQG
Trigger: ACCCTGACGGCCGCCTGCCCACCCCCTCTGCCCCTC...AAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTCCTGGCTCCGGCTGGTaGGCTCCCCTGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: AGQEDSPPELGILRSWGAPGSGW*APLEPS
Trigger: ACTGGGCTCCAGGGGAGCCCACCAGCCGGAGCCAGG...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp CCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTACGCAGTCCTCGCCCTaGCTCCGGCTGGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGKAGAIEEREMCQLPPFTQSSP*LRLVGS
Trigger: GGAGCCCACCAGCCGGAGCCAGGGCGAGGACTGCGT...AAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp AGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTGGCGGCGTGCATGTaGCCAGCCGGTCGCACACCC +
Preference number: 4 (lower is better)
Translates to: RLDRRTHHLSWGYSGPGVLAACM*PAGRTP
Trigger: GGGTGTGCGACCGGCTGGCCACATGCACGCCGCCAG...CACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTCGGGCGTGGACCCACTaGTTGGTGCCCTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: AGQEDSPPELGILRSWGARAWTH*LVPLPK
Trigger: CTTCGGCAAGGGCACCAAGCAGTGGGTCCACGCCCG...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp ACTCCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGGCTGGTGGGCTCCCCTaGAGCCCAGTTGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: TPGKAGAIEEREMCQLPPAGGLP*SPVAVV
Trigger: GACTACAGCAACTGGGCTCCAGGGGAGCCCACCAGC...CGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCCCTGGCTCCGGCTGGTaGGCTCCCCTGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LMQAGQEDSPPELGILRSPGSGW*APLEPS
Trigger: ACTGGGCTCCAGGGGAGCCCACCAGCCGGAGCCAGG...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp ACTCCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTCTGAGTCCCACGCCTaGAACACCGCCTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TPGKAGAIEEREMCQLPPSESHA*NTASWE
Trigger: TTCCCAGGAGGCGGTGTTGCAGGCGTGGGACTCAGA...CGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp AGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAACGGGCGTGGACCCACTaGTTGGTGCCCTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: RGHRGAGDVSAASVWVAERAWTH*LVPLPK
Trigger: CTTCGGCAAGGGCACCAAGCAGTGGGTCCACGCCCG...TTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGCCGGTGTGGCTGGCATaGTTGGTCAGGAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GKAGAIEEREMCQLPPFGPVWLA*LVRKSC
Trigger: GCAGGACTTCCTGACCAAGCATGCCAGCCACACCGG...CCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGACGCAGTCCTCGCCCTaGCTCCGGCTGGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMTQSSP*LRLVGS
Trigger: GGAGCCCACCAGCCGGAGCCAGGGCGAGGACTGCGT...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCCCGCGGAACCTTCGCTaGCTGGCGGCGTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: LMQAGQEDSPPELGILRSPRNLR*LAACMW
Trigger: CCACATGCACGCCGCCAGCCAGCGAAGGTTCCGCGG...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCGAGGGGCAGAGGGGGTaGGCAGGCGGCCGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: FSHKEAFRPWLGVFRVLLEGQRG*AGGRQG
Trigger: ACCCTGACGGCCGCCTGCCCACCCCCTCTGCCCCTC...GAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp ACTCCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGGGACCCACTGCTTGGTaGCCTTGCCGAAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: TPGKAGAIEEREMCQLPPGPTAW*PCRSSS
Trigger: GCTACTACTTCGGCAAGGGCACCAAGCAGTGGGTCC...CGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp ACTCCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGGGGTCTTCAGGGTCTTaGTCTGGGCCTGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: TPGKAGAIEEREMCQLPPGSSGS*SGPGCI
Trigger: GATACAGCCAGGCCCAGAGCAAGACCCTGAAGACCC...CGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGGGGAGATGTGTCAGCTaGCTCCGTTTGGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GKAGAIEEREMCQLPPFGGRCVS*LRLGGR
Trigger: TCTGCCACCCAAACGGAGGCAGCTGACACATCTCCC...CCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGAGGAGCCGGTGTGGCTaGCATGCTTGGTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GKAGAIEEREMCQLPPFGRSRCG*HAWSGS
Trigger: ACTTCCTGACCAAGCATGCCAGCCACACCGGCTCCT...CCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGGTTGGGGTGTACTCCTaGGAAGGCAGGGGCCATAGA +
Preference number: 4 (lower is better)
Translates to: GKAGAIEEREMCQLPPFGVGVYS*EGRGHR
Trigger: TCTATGGCCCCTGCCTTCCCAGGAGTACACCCCAAC...CCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp ACTCCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGACTCACCACCTGAGCTaGGGATACTCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TPGKAGAIEEREMCQLPPTHHLS*GYSGPG
Trigger: CCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGT...CGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp ACTCCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGGTCAGGGTCTGGTCTTaGATCAGGTCCCATGGACTC +
Preference number: 4 (lower is better)
Translates to: TPGKAGAIEEREMCQLPPVRVWS*IRSHGL
Trigger: GAGTCCATGGGACCTGATTCAAGACCAGACCCTGAC...CGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTGTGGACTGGGATTTCTaGGCCATCTGGTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: AGQEDSPPELGILRSWGAVDWDF*AIWSPW
Trigger: CCACGGTGACCAGATGGCGCAGAAATCCCAGTCCAC...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp AGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGCGGGCGTGGACCCACTaGTTGGTGCCCTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: RSGRCVSCLRLGGRKCHRRAWTH*LVPLPK
Trigger: CTTCGGCAAGGGCACCAAGCAGTGGGTCCACGCCCG...CCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp AGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCGTGGACCCACTGCTTaGTGCCCTTGCCGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: RLDRRTHHLSWGYSGPGVRGPTA*CPCRSS
Trigger: ACTACTTCGGCAAGGGCACCAAGCAGTGGGTCCACG...CACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATCAGGCATACCGGGCGTaGACCCACTGCTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GHRGAGDVSAASVWVAENQAYRA*THCLVP
Trigger: GGGCACCAAGCAGTGGGTCCACGCCCGGTATGCCTG...ATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp AGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGCAGGCATACCGGGCGTaGACCCACTGCTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RSGRCVSCLRLGGRKCHRQAYRA*THCLVP
Trigger: GGGCACCAAGCAGTGGGTCCACGCCCGGTATGCCTG...CCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCGCTGGTGGGCTCCCCTaGAGCCCAGTTGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LMQAGQEDSPPELGILRSAGGLP*SPVAVV
Trigger: GACTACAGCAACTGGGCTCCAGGGGAGCCCACCAGC...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCGCTGGCGGCGTGCATGTaGCCAGCCGGTCGCACACCC +
Preference number: 4 (lower is better)
Translates to: GWQKMSQGPFSHKEAFRPLAACM*PAGRTP
Trigger: GGGTGTGCGACCGGCTGGCCACATGCACGCCGCCAG...CGGCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGGAACCTTCGCTGGCTaGCGGCGTGCATGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GHRGAGDVSAASVWVAENGTFAG*RRACGQ
Trigger: CTGGCCACATGCACGCCGCCAGCCAGCGAAGGTTCC...ATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp ATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCGAGGGGCAGAGGGGGTaGGCAGGCGGCCGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ILLMQAGQEDSPPELGILEGQRG*AGGRQG
Trigger: ACCCTGACGGCCGCCTGCCCACCCCCTCTGCCCCTC...GAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGCTTTTAGGCCGTGGTTaGGGGTCTTCAGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GKAGAIEEREMCQLPPFGLLGRG*GSSGSC
Trigger: GCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAG...CCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp AGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGACTCACCACCTGAGCTaGGGATACTCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RLDRRTHHLSWGYSGPGVTHHLS*GYSGPG
Trigger: CCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGT...CACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTACTCACCACCTGAGCTaGGGATACTCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AGQEDSPPELGILRSWGATHHLS*GYSGPG
Trigger: CCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGT...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTGTCGACCAGAGCGATTaGCAGGGACCGTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: AGQEDSPPELGILRSWGAVDQSD*QGPSET
Trigger: TGTCTCTGACGGTCCCTGCCAATCGCTCTGGTCGAC...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346664.9
ENST00000597921.6
CDS-3UTR TCA 90 bp AGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGCCCAGCAGCACGATCTaGGTCCCACGCCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: RSGRCVSCLRLGGRKCHRPSSTI*VPRLQH
Trigger: GTGTTGCAGGCGTGGGACTCAGATCGTGCTGCTGGG...CCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTTGTGTGGTGTCCCAGTaGCACAGGAGAAGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: AGQEDSPPELGILRSWGACVVSQ*HRRSRV
Trigger: GACTCTGCTTCTCCTGTGGCACTGGGACACCACACA...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTGAGGAGATGGGACCCACTGCTTGGTaGCCTTGCCGAAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: EDSPPELGILRSWGAEEMGPTAW*PCRSSS
Trigger: GCTACTACTTCGGCAAGGGCACCAAGCAGTGGGTCC...CATCTCCTCAGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCCCGGTGTGGCTGGCATaGTTGGTCAGGAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LMQAGQEDSPPELGILRSPVWLA*LVRKSC
Trigger: GCAGGACTTCCTGACCAAGCATGCCAGCCACACCGG...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTGAGGAGATGGGGAGATGTGTCAGCTaGCTCCGTTTGGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: EDSPPELGILRSWGAEEMGRCVS*LRLGGR
Trigger: TCTGCCACCCAAACGGAGGCAGCTGACACATCTCCC...CATCTCCTCAGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp AGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAACTGAGGAGATGGGGCTaGATCTGGAGAGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RGHRGAGDVSAASVWVAELRRWG*IWRGCC
Trigger: ACAGCACCCTCTCCAGATGCAGCCCCATCTCCTCAG...TTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGGCCATCTGGTCACCGTaGTGGCTTTCCAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GKAGAIEEREMCQLPPFGAIWSP*WLSKFL
Trigger: CAAGAACTTGGAAAGCCACCACGGTGACCAGATGGC...CCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp CCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGATTTCTGCGCCATCTaGTCACCGTGGTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PGKAGAIEEREMCQLPPFDFCAI*SPWWLS
Trigger: GGAAAGCCACCACGGTGACCAGATGGCGCAGAAATC...AAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp AGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGTGCACACAAAGCCGCTaGACACCTGCAACTCCATCC +
Preference number: 4 (lower is better)
Translates to: RLDRRTHHLSWGYSGPGVCTQSR*TPATPS
Trigger: GGATGGAGTTGCAGGTGTCCAGCGGCTTTGTGTGCA...CACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCGGAACCTTCGCTGGCTaGCGGCGTGCATGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FSHKEAFRPWLGVFRVLLGTFAG*RRACGQ
Trigger: CTGGCCACATGCACGCCGCCAGCCAGCGAAGGTTCC...GAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTTTGAATCAGGTCCCATaGACTCCGCGGAACCTTCGC +
Preference number: 4 (lower is better)
Translates to: AGQEDSPPELGILRSWGALNQVP*TPRNLR
Trigger: GCGAAGGTTCCGCGGAGTCCATGGGACCTGATTCAA...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp GAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTGAGGAGATGGTCAGGGTCTGGTCTTaGATCAGGTCCCATGGACTC +
Preference number: 4 (lower is better)
Translates to: EDSPPELGILRSWGAEEMVRVWS*IRSHGL
Trigger: GAGTCCATGGGACCTGATTCAAGACCAGACCCTGAC...CATCTCCTCAGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTGAGGAGATGTGTGTGGTGTCCCAGTaGCACAGGAGAAGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: EDSPPELGILRSWGAEEMCVVSQ*HRRSRV
Trigger: GACTCTGCTTCTCCTGTGGCACTGGGACACCACACA...CATCTCCTCAGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp TTCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCCCCCTGGAGCCCAGTTaGTGTAGTCCACGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: FSHKEAFRPWLGVFRVLLPLEPS*CSPRGS
Trigger: GGAGCCACGTGGACTACAGCAACTGGGCTCCAGGGG...GAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp CCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGAAATCTGCGTGGACTaGGATTTCTGCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PGKAGAIEEREMCQLPPFEICVD*DFCAIW
Trigger: CCAGATGGCGCAGAAATCCCAGTCCACGCAGATTTC...AAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCTGGCGGCGTGCATGTaGCCAGCCGGTCGCACACCC +
Preference number: 4 (lower is better)
Translates to: LGGRKCHRDLSATKRLLGLAACM*PAGRTP
Trigger: GGGTGTGCGACCGGCTGGCCACATGCACGCCGCCAG...GCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCGGGAACCTTCGCTGGCTaGCGGCGTGCATGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GWQKMSQGPFSHKEAFRPGTFAG*RRACGQ
Trigger: CTGGCCACATGCACGCCGCCAGCCAGCGAAGGTTCC...CGGCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp ACTCCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGATTGACCTTCCTCCATaGCGGTCCTGCTTGGATTCT +
Preference number: 4 (lower is better)
Translates to: TPGKAGAIEEREMCQLPPIDLPP*RSCLDS
Trigger: AGAATCCAAGCAGGACCGCCATGGAGGAAGGTCAAT...CGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346664.9
ENST00000597921.6
CDS-3UTR CCA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGCAACACCGCCTCCTaGGAAGCTCCTCGATCTCTG +
Preference number: 4 (lower is better)
Translates to: LMQAGQEDSPPELGILRSCNTAS*EAPRSL
Trigger: CAGAGATCGAGGAGCTTCCCAGGAGGCGGTGTTGCA...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346664.9
ENST00000597921.6
CDS-3UTR TCA 90 bp AGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAACTGCCCCATTTTATTaGTGCAGGCTGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RGHRGAGDVSAASVWVAETAPFY*CRLDRR
Trigger: CCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGT...TTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTCTGAGTCCCACGCCTaGAACACCGCCTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ASVWVAENVTGTFQPQRGSESHA*NTASWE
Trigger: TTCCCAGGAGGCGGTGTTGCAGGCGTGGGACTCAGA...GCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGGGACCCACTGCTTGGTaGCCTTGCCGAAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMGPTAW*PCRSSS
Trigger: GCTACTACTTCGGCAAGGGCACCAAGCAGTGGGTCC...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGGCCTGGCTGTATCCATaGTCAAGAGTGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMAWLYP*SRVERG
Trigger: GCCCCTCTCCACTCTTGAGCATGGATACAGCCAGGC...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGCCTGGCTGTATCCATaGTCAAGAGTGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GHRGAGDVSAASVWVAENAWLYP*SRVERG
Trigger: GCCCCTCTCCACTCTTGAGCATGGATACAGCCAGGC...ATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGGGTCTTCAGGGTCTTaGTCTGGGCCTGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: GHRGAGDVSAASVWVAENGSSGS*SGPGCI
Trigger: GATACAGCCAGGCCCAGAGCAAGACCCTGAAGACCC...ATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGGGGAGATGTGTCAGCTaGCTCCGTTTGGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMGRCVS*LRLGGR
Trigger: TCTGCCACCCAAACGGAGGCAGCTGACACATCTCCC...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp ACTCCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGCTCTCGTTCAATTCCTaGGACTTGAAGCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: TPGKAGAIEEREMCQLPPLSFNS*DLKLLR
Trigger: TCTGAGCAGCTTCAAGTCCCAGGAATTGAACGAGAG...CGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGAGGAGCCGGTGTGGCTaGCATGCTTGGTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMRSRCG*HAWSGS
Trigger: ACTTCCTGACCAAGCATGCCAGCCACACCGGCTCCT...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCATCCAGGAGCCGGTGTaGCTGGCATGCTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ASVWVAENVTGTFQPQRGIQEPV*LACLVR
Trigger: CCTGACCAAGCATGCCAGCCACACCGGCTCCTGGAT...GCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTACCTGGCTCCGGCTGGTaGGCTCCCCTGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLPGSGW*APLEPS
Trigger: ACTGGGCTCCAGGGGAGCCCACCAGCCGGAGCCAGG...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGAGGCTTTTAGGCCGTaGTTGGGGGTCTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GHRGAGDVSAASVWVAENEAFRP*LGVFRV
Trigger: GACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTC...ATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTTGGGGTGTACTCCTaGGAAGGCAGGGGCCATAGA +
Preference number: 4 (lower is better)
Translates to: GHRGAGDVSAASVWVAENVGVYS*EGRGHR
Trigger: TCTATGGCCCCTGCCTTCCCAGGAGTACACCCCAAC...ATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGGTTGGGGTGTACTCCTaGGAAGGCAGGGGCCATAGA +
Preference number: 4 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMVGVYS*EGRGHR
Trigger: TCTATGGCCCCTGCCTTCCCAGGAGTACACCCCAAC...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATAGATGGGGCTGCATCTaGAGAGGGTGCTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GHRGAGDVSAASVWVAENRWGCI*RGCCWG
Trigger: ACCCCAACAGCACCCTCTCCAGATGCAGCCCCATCT...ATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTTTTATTGATGCAGGCTaGACAGGAGGACTCACCACC +
Preference number: 4 (lower is better)
Translates to: AGQEDSPPELGILRSWGAFIDAG*TGGLTT
Trigger: GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAA...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp ATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCCCCAGCAGCACGATCTaGGTCCCACGCCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: ILLMQAGQEDSPPELGILPSSTI*VPRLQH
Trigger: GTGTTGCAGGCGTGGGACTCAGATCGTGCTGCTGGG...GAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp AGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCACCCAGCAGCACGATCTaGGTCCCACGCCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: RCVSCLRLGGRKCHRDLSPSSTI*VPRLQH
Trigger: GTGTTGCAGGCGTGGGACTCAGATCGTGCTGCTGGG...TGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp GGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTCTTTCCAGCAAATCTaGAGCTTCGTTCCTCTCGTT +
Preference number: 4 (lower is better)
Translates to: GKAGAIEEREMCQLPPFGSFQQI*SFVPLV
Trigger: AACGAGAGGAACGAAGCTTCAGATTTGCTGGAAAGA...CCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp AGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGACTTCCGTTGGAAATTaGTCCACTTTTCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: RLDRRTHHLSWGYSGPGVTSVGN*STFQGT
Trigger: CGTGCCCTGAAAAGTGGATCAATTTCCAACGGAAGT...CACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp ATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCCAGGTCCTGGGGTGCTaGGGAGATGGGGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: ILLMQAGQEDSPPELGILQVLGC*GDGAAS
Trigger: AGATGCAGCCCCATCTCCTCAGCACCCCAGGACCTG...GAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTAGTTCCTGTGAAATCTaGGTGGACTGGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: AGQEDSPPELGILRSWGASSCEI*VDWDFC
Trigger: GCAGAAATCCCAGTCCACGCAGATTTCACAGGAACT...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp AGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGTGGATGCTGACCAGCTaGCCTTCCATGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: RSGRCVSCLRLGGRKCHRWMLTS*PSMSSQ
Trigger: CTGTGACGACATGGAAGGGCAGCTGGTCAGCATCCA...CCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp TTCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCGGGTCTTCAGGGTCTTaGTCTGGGCCTGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: FSHKEAFRPWLGVFRVLLGSSGS*SGPGCI
Trigger: GATACAGCCAGGCCCAGAGCAAGACCCTGAAGACCC...GAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp AGGCCATCACTGCCCCATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGCAACACCGCCTCCTaGGAAGCTCCTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: RPSLPHFIDAGWTGGLTTCNTAS*EAPRSP
Trigger: AGGAGATCGAGGAGCTTCCCAGGAGGCGGTGTTGCA...GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTGATGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS-3UTR CCA 90 bp ACTCCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGGGCTTTCCAAGTTCTTaGAAACTTGAGAGACGTTCC +
Preference number: 4 (lower is better)
Translates to: TPGKAGAIEEREMCQLPPGFPSS*KLERRS
Trigger: GGAACGTCTCTCAAGTTTCCAAGAACTTGGAAAGCC...CGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCGAAATCTGCGTGGACTaGGATTTCTGCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LMQAGQEDSPPELGILRSEICVD*DFCAIW
Trigger: CCAGATGGCGCAGAAATCCCAGTCCACGCAGATTTC...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTCTCTCGTTCAATTCCTaGGACTTGAAGCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: AGQEDSPPELGILRSWGALSFNS*DLKLLR
Trigger: TCTGAGCAGCTTCAAGTCCCAGGAATTGAACGAGAG...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCCGTGGACCCACTGCTTaGTGCCCTTGCCGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: FSHKEAFRPWLGVFRVLLRGPTA*CPCRSS
Trigger: ACTACTTCGGCAAGGGCACCAAGCAGTGGGTCCACG...GAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCAGGCATACCGGGCGTaGACCCACTGCTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LGGRKCHRDLSATKRLLGQAYRA*THCLVP
Trigger: GGGCACCAAGCAGTGGGTCCACGCCCGGTATGCCTG...GCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCGATCCAGGAGCCGGTGTaGCTGGCATGCTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GWQKMSQGPFSHKEAFRPIQEPV*LACLVR
Trigger: CCTGACCAAGCATGCCAGCCACACCGGCTCCTGGAT...CGGCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTACCGCGGAACCTTCGCTaGCTGGCGGCGTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLPRNLR*LAACMW
Trigger: CCACATGCACGCCGCCAGCCAGCGAAGGTTCCGCGG...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp AGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGTTGAATCAGGTCCCATaGACTCCGCGGAACCTTCGC +
Preference number: 4 (lower is better)
Translates to: RSGRCVSCLRLGGRKCHRLNQVP*TPRNLR
Trigger: GCGAAGGTTCCGCGGAGTCCATGGGACCTGATTCAA...CCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCGAGGCTTTTAGGCCGTaGTTGGGGGTCTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ASVWVAENVTGTFQPQRGEAFRP*LGVFRV
Trigger: GACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTC...GCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCTGCAACACCGCCTCCTaGGAAGCTCCTCGATCTCTG +
Preference number: 4 (lower is better)
Translates to: FSHKEAFRPWLGVFRVLLCNTAS*EAPRSL
Trigger: CAGAGATCGAGGAGCTTCCCAGGAGGCGGTGTTGCA...GAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346664.9
ENST00000597921.6
CDS-3UTR CCA 90 bp AGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGGCACAATCACAGCTCTaGTCACTTAGTGGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: RLDRRTHHLSWGYSGPGVAQSQL*SLSGVW
Trigger: CCAAACTCCACTAAGTGACCAGAGCTGTGATTGTGC...CACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597921.6
CDS-3UTR TCA 90 bp TTCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCGTTCTATTTGGCCTCTaGCTCTATTGGGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: FSHKEAFRPWLGVFRVLLVLFGL*LYWAPR
Trigger: GCGGGGAGCCCAATAGAGTCAGAGGCCAAATAGAAC...GAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS-3UTR TCA 90 bp TTCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCCTGCTCAGATCTGCTTaGAGCCCGTTCAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: FSHKEAFRPWLGVFRVLLLLRSA*SPFRFQ
Trigger: CTGGAACCTGAACGGGCTTCAAGCAGATCTGAGCAG...GAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp GCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCCTGCTCAGATCTGCTTaGAGCCCGTTCAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ASVWVAENVTGTFQPQRGLLRSA*SPFRFQ
Trigger: CTGGAACCTGAACGGGCTTCAAGCAGATCTGAGCAG...GCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp CCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTCAGGTCCTGGGGTGCTaGGGAGATGGGGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: PFGWQKMSQGPFSHKEAFQVLGC*GDGAAS
Trigger: AGATGCAGCCCCATCTCCTCAGCACCCCAGGACCTG...AAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCGGTGGACTGGGATTTCTaGGCCATCTGGTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: GWQKMSQGPFSHKEAFRPVDWDF*AIWSPW
Trigger: CCACGGTGACCAGATGGCGCAGAAATCCCAGTCCAC...CGGCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCGAAGCTGCTCAGATCTaGTTGAAGCCCGTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LMQAGQEDSPPELGILRSEAAQI*LKPVQV
Trigger: AACCTGAACGGGCTTCAAGCAGATCTGAGCAGCTTC...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATACTGCTTGGTGCCCTTaGCGAAGTAGTAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: GHRGAGDVSAASVWVAENTAWCP*RSSSTS
Trigger: GGAAGTGCTACTACTTCGGCAAGGGCACCAAGCAGT...ATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp AGGCCATCACTGCCCCATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGGATGCTGACCAGCTaGCCTTCCATGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: RPSLPHFIDAGWTGGLTTWMLTS*PSMSSQ
Trigger: CTGTGACGACATGGAAGGGCAGCTGGTCAGCATCCA...GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTGATGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTGGATGCTGACCAGCTaGCCTTCCATGTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: ASVWVAENVTGTFQPQRGWMLTS*PSMSSQ
Trigger: CTGTGACGACATGGAAGGGCAGCTGGTCAGCATCCA...GCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTGAGGAGATGAGCTCCTCGATCTCCTaGCTTGGAGGATTCATTATG +
Preference number: 4 (lower is better)
Translates to: EDSPPELGILRSWGAEEMSSSIS*LGGFIM
Trigger: CATAATGAATCCTCCAAGCCAGGAGATCGAGGAGCT...CATCTCCTCAGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS-3UTR CCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGGCCATCTGGTCACCGTaGTGGCTTTCCAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMAIWSP*WLSKFL
Trigger: CAAGAACTTGGAAAGCCACCACGGTGACCAGATGGC...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCTGATTTCTGCGCCATCTaGTCACCGTGGTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SATKRLLGRGWGSSGSCSDFCAI*SPWWLS
Trigger: GGAAAGCCACCACGGTGACCAGATGGCGCAGAAATC...AGAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGGAAATCTGCGTGGACTaGGATTTCTGCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMEICVD*DFCAIW
Trigger: CCAGATGGCGCAGAAATCCCAGTCCACGCAGATTTC...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCGAGGAGCCGGTGTGGCTaGCATGCTTGGTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GWQKMSQGPFSHKEAFRPRSRCG*HAWSGS
Trigger: ACTTCCTGACCAAGCATGCCAGCCACACCGGCTCCT...CGGCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp AGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAATCCAGGAGCCGGTGTaGCTGGCATGCTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RCVSCLRLGGRKCHRDLSIQEPV*LACLVR
Trigger: CCTGACCAAGCATGCCAGCCACACCGGCTCCTGGAT...TGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCGCTGGTGGGCTCCCCTaGAGCCCAGTTGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LGGRKCHRDLSATKRLLGAGGLP*SPVAVV
Trigger: GACTACAGCAACTGGGCTCCAGGGGAGCCCACCAGC...GCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTTTATTGATGCAGGCTaGACAGGAGGACTCACCACC +
Preference number: 4 (lower is better)
Translates to: LMQAGQEDSPPELGILRSFIDAG*TGGLTT
Trigger: GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAA...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
3UTR CAA 72 bp GGGACAAATGTGGGAGGCCATCACTGCCCCATTTTATaGATGCAGGCTGGACAGGAGGACTCACCACCTGAG +
Preference number: 4 (lower is better)
Translates to: GTNVGGHHCPIL*MQAGQEDSPPE
Trigger: CTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTGATGGCCTCCCACATTTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS-3UTR TCA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCACTTCCGTTGGAAATTaGTCCACTTTTCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: LMQAGQEDSPPELGILRSTSVGN*STFQGT
Trigger: CGTGCCCTGAAAAGTGGATCAATTTCCAACGGAAGT...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTACAGGTCCTGGGGTGCTaGGGAGATGGGGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLQVLGC*GDGAAS
Trigger: AGATGCAGCCCCATCTCCTCAGCACCCCAGGACCTG...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp TCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCTACTGCCCCATTTTATTaGTGCAGGCTGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: SATKRLLGRGWGSSGSCSTAPFY*CRLDRR
Trigger: CCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGT...AGAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp TTCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCACTGCCCCATTTTATTaGTGCAGGCTGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: FSHKEAFRPWLGVFRVLLTAPFY*CRLDRR
Trigger: CCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGT...GAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp AGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGTCGATCTCTGAATATTaGCCTTCCTCCATGGCGGTC +
Preference number: 4 (lower is better)
Translates to: RSGRCVSCLRLGGRKCHRSISEY*PSSMAV
Trigger: GACCGCCATGGAGGAAGGTCAATATTCAGAGATCGA...CCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346664.9
ENST00000597921.6
CDS-3UTR TCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCGATCTCTGAATATTaGCCTTCCTCCATGGCGGTC +
Preference number: 4 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMSISEY*PSSMAV
Trigger: GACCGCCATGGAGGAAGGTCAATATTCAGAGATCGA...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346664.9
ENST00000597921.6
CDS-3UTR GCA 90 bp GCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTCAGGGCACGTGTTaGACACAAAGCCGCTGGACA +
Preference number: 4 (lower is better)
Translates to: ASVWVAENVTGTFQPQRGFQGTC*TQSRWT
Trigger: TGTCCAGCGGCTTTGTGTGCAACACGTGCCCTGAAA...GCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp TTCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCTTTCAGGGCACGTGTTaGACACAAAGCCGCTGGACA +
Preference number: 4 (lower is better)
Translates to: FSHKEAFRPWLGVFRVLLFQGTC*TQSRWT
Trigger: TGTCCAGCGGCTTTGTGTGCAACACGTGCCCTGAAA...GAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp TTCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCACTGCTTGGTGCCCTTaGCGAAGTAGTAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: FSHKEAFRPWLGVFRVLLTAWCP*RSSSTS
Trigger: GGAAGTGCTACTACTTCGGCAAGGGCACCAAGCAGT...GAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCGCCATCTGGTCACCGTaGTGGCTTTCCAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: ASVWVAENVTGTFQPQRGAIWSP*WLSKFL
Trigger: CAAGAACTTGGAAAGCCACCACGGTGACCAGATGGC...GCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp AGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCACGTGGACCCACTGCTTaGTGCCCTTGCCGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: RCVSCLRLGGRKCHRDLSRGPTA*CPCRSS
Trigger: ACTACTTCGGCAAGGGCACCAAGCAGTGGGTCCACG...TGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCGTTGAATCAGGTCCCATaGACTCCGCGGAACCTTCGC +
Preference number: 4 (lower is better)
Translates to: GWQKMSQGPFSHKEAFRPLNQVP*TPRNLR
Trigger: GCGAAGGTTCCGCGGAGTCCATGGGACCTGATTCAA...CGGCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCGTTCAGGGTCTTGCTCTaGGCCTGGCTGTATCCATGC +
Preference number: 4 (lower is better)
Translates to: GWQKMSQGPFSHKEAFRPFRVLL*AWLYPC
Trigger: GCATGGATACAGCCAGGCCCAGAGCAAGACCCTGAA...CGGCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCGCTTTTAGGCCGTGGTTaGGGGTCTTCAGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GWQKMSQGPFSHKEAFRPLLGRG*GSSGSC
Trigger: GCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAG...CGGCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCTCTGCCTCCGTTTGGGTaGCAGAAAATGTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: SATKRLLGRGWGSSGSCSLPPFG*QKMSQG
Trigger: TCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAG...AGAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp AGGCCATCACTGCCCCATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCCTGCCTCCGTTTGGGTaGCAGAAAATGTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: RPSLPHFIDAGWTGGLTTLPPFG*QKMSQG
Trigger: TCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAG...GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTGATGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp ATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGATGGGGCTGCATCTaGAGAGGGTGCTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ILLMQAGQEDSPPELGILRWGCI*RGCCWG
Trigger: ACCCCAACAGCACCCTCTCCAGATGCAGCCCCATCT...GAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACTTAGTGGAGTTTaGAGCCTGTGTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMSLSGV*SLCLSS
Trigger: GGAGGACAGACACAGGCTCCAAACTCCACTAAGTGA...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597921.6
CDS-3UTR TCA 90 bp ATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCCTGCTCAGATCTGCTTaGAGCCCGTTCAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ILLMQAGQEDSPPELGILLLRSA*SPFRFQ
Trigger: CTGGAACCTGAACGGGCTTCAAGCAGATCTGAGCAG...GAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCGAAGCTGCTCAGATCTaGTTGAAGCCCGTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: ASVWVAENVTGTFQPQRGEAAQI*LKPVQV
Trigger: AACCTGAACGGGCTTCAAGCAGATCTGAGCAGCTTC...GCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp AGGCCATCACTGCCCCATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCAAGCCGCTGGACACCTaGAACTCCATCCTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: RPSLPHFIDAGWTGGLTTKPLDT*NSILSF
Trigger: AAAGCTAAGGATGGAGTTGCAGGTGTCCAGCGGCTT...GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTGATGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp TTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCTGAGGAGATGGGGCTaGATCTGGAGAGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LGGRKCHRDLSATKRLLGLRRWG*IWRGCC
Trigger: ACAGCACCCTCTCCAGATGCAGCCCCATCTCCTCAG...GCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCGTGGGAGGCCATCACTaGCCCATTTTATTGATGCAG +
Preference number: 4 (lower is better)
Translates to: ASVWVAENVTGTFQPQRGVGGHH*PILLMQ
Trigger: CTGCATCAATAAAATGGGGCAGTGATGGCCTCCCAC...GCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS-3UTR CCA 90 bp GGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATATCTGGTCACCGTGGTaGCTTTCCAAGTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GHRGAGDVSAASVWVAENIWSPW*LSKFLE
Trigger: TTCCAAGAACTTGGAAAGCCACCACGGTGACCAGAT...ATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGATCTGGTCACCGTGGTaGCTTTCCAAGTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMIWSPW*LSKFLE
Trigger: TTCCAAGAACTTGGAAAGCCACCACGGTGACCAGAT...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp ATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCGATTTCTGCGCCATCTaGTCACCGTGGTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ILLMQAGQEDSPPELGILDFCAI*SPWWLS
Trigger: GGAAAGCCACCACGGTGACCAGATGGCGCAGAAATC...GAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp ATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCTGCACACAAAGCCGCTaGACACCTGCAACTCCATCC +
Preference number: 4 (lower is better)
Translates to: ILLMQAGQEDSPPELGILCTQSR*TPATPS
Trigger: GGATGGAGTTGCAGGTGTCCAGCGGCTTTGTGTGCA...GAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp AGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCATTCAGGGTCTTGCTCTaGGCCTGGCTGTATCCATGC +
Preference number: 4 (lower is better)
Translates to: RCVSCLRLGGRKCHRDLSFRVLL*AWLYPC
Trigger: GCATGGATACAGCCAGGCCCAGAGCAAGACCCTGAA...TGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp TTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCGTCGACCAGAGCGATTaGCAGGGACCGTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LGGRKCHRDLSATKRLLGVDQSD*QGPSET
Trigger: TGTCTCTGACGGTCCCTGCCAATCGCTCTGGTCGAC...GCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346664.9
ENST00000597921.6
CDS-3UTR CCA 90 bp TCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCTGCACAATCACAGCTCTaGTTAGTGGAGTTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SATKRLLGRGWGSSGSCSAQSQL*LVEFGA
Trigger: GGCTCCAAACTCCACTAACCAGAGCTGTGATTGTGC...AGAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000346664.9
CDS-3UTR TCA 90 bp GCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCTTTCCAGCAAATCTaGAGCTTCGTTCCTCTCGTT +
Preference number: 4 (lower is better)
Translates to: AIEEREMCQLPPFGWQKMSFQQI*SFVPLV
Trigger: AACGAGAGGAACGAAGCTTCAGATTTGCTGGAAAGA...CATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp AGGCCATCACTGCCCCATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCACTTCCGTTGGAAATTaGTCCACTTTTCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: RPSLPHFIDAGWTGGLTTTSVGN*STFQGT
Trigger: CGTGCCCTGAAAAGTGGATCAATTTCCAACGGAAGT...GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTGATGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp TTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCGTCAGGGTCTGGTCTTaGATCAGGTCCCATGGACTC +
Preference number: 4 (lower is better)
Translates to: LGGRKCHRDLSATKRLLGVRVWS*IRSHGL
Trigger: GAGTCCATGGGACCTGATTCAAGACCAGACCCTGAC...GCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp GGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGCATTATGCTAAATTCTaGTTGTTCCAAGTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: GKAGAIEEREMCQLPPFGHYAKF*LFQVPV
Trigger: AACAGGAACTTGGAACAAGCAGAATTTAGCATAATG...CCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS-3UTR GCA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGCCTGGCTGTATCCATaGTCAAGAGTGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLAWLYP*SRVERG
Trigger: GCCCCTCTCCACTCTTGAGCATGGATACAGCCAGGC...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTACTGAGGAGATGGGGCTaGATCTGGAGAGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLLRRWG*IWRGCC
Trigger: ACAGCACCCTCTCCAGATGCAGCCCCATCTCCTCAG...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp AGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGAGTTCCTGTTCTATTTaGCCTCTGACTCTATTGGGC +
Preference number: 4 (lower is better)
Translates to: RSGRCVSCLRLGGRKCHRSSCSI*PLTLLG
Trigger: GCCCAATAGAGTCAGAGGCCAAATAGAACAGGAACT...CCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS-3UTR CCA 90 bp AGGCCATCACTGCCCCATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCCTCTCGTTCAATTCCTaGGACTTGAAGCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RPSLPHFIDAGWTGGLTTLSFNS*DLKLLR
Trigger: TCTGAGCAGCTTCAAGTCCCAGGAATTGAACGAGAG...GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTGATGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp CCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTTGCACACAAAGCCGCTaGACACCTGCAACTCCATCC +
Preference number: 4 (lower is better)
Translates to: PFGWQKMSQGPFSHKEAFCTQSR*TPATPS
Trigger: GGATGGAGTTGCAGGTGTCCAGCGGCTTTGTGTGCA...AAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGAGGCTTTTAGGCCGTaGTTGGGGGTCTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLEAFRP*LGVFRV
Trigger: GACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTC...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCGTTTATTGATGCAGGCTaGACAGGAGGACTCACCACC +
Preference number: 4 (lower is better)
Translates to: GWQKMSQGPFSHKEAFRPFIDAG*TGGLTT
Trigger: GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAA...CGGCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp TTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCAAGTTCTTGGAAACTTaGGAGACGTTCCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGGRKCHRDLSATKRLLGKFLET*ETFRAA
Trigger: GGCTGCCCGGAACGTCTCTCAAGTTTCCAAGAACTT...GCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR TCA 90 bp TTCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCTCTTTCCAGCAAATCTaGAGCTTCGTTCCTCTCGTT +
Preference number: 4 (lower is better)
Translates to: FSHKEAFRPWLGVFRVLLSFQQI*SFVPLV
Trigger: AACGAGAGGAACGAAGCTTCAGATTTGCTGGAAAGA...GAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp AGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGAAGCTGCTCAGATCTaGTTGAAGCCCGTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: RCVSCLRLGGRKCHRDLSEAAQI*LKPVQV
Trigger: AACCTGAACGGGCTTCAAGCAGATCTGAGCAGCTTC...TGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp TTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCTTTCAGGGCACGTGTTaGACACAAAGCCGCTGGACA +
Preference number: 4 (lower is better)
Translates to: LGGRKCHRDLSATKRLLGFQGTC*TQSRWT
Trigger: TGTCCAGCGGCTTTGTGTGCAACACGTGCCCTGAAA...GCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp CCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTCTGCCTCCGTTTGGGTaGCAGAAAATGTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: PFGWQKMSQGPFSHKEAFLPPFG*QKMSQG
Trigger: TCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAG...AAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAAGAAGGGGACAAATGTaGGAGGCCATCACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLRRGQM*EAITAP
Trigger: TGGGGCAGTGATGGCCTCCCACATTTGTCCCCTTCT...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS-3UTR GCA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAACTGCTTGGTGCCCTTaGCGAAGTAGTAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLTAWCP*RSSSTS
Trigger: GGAAGTGCTACTACTTCGGCAAGGGCACCAAGCAGT...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp CCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTATTGACCTTCCTCCATaGCGGTCCTGCTTGGATTCT +
Preference number: 4 (lower is better)
Translates to: PFGWQKMSQGPFSHKEAFIDLPP*RSCLDS
Trigger: AGAATCCAAGCAGGACCGCCATGGAGGAAGGTCAAT...AAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346664.9
ENST00000597921.6
CDS-3UTR GCA 90 bp TTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCAGTTCCTGTGAAATCTaGGTGGACTGGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGGRKCHRDLSATKRLLGSSCEI*VDWDFC
Trigger: GCAGAAATCCCAGTCCACGCAGATTTCACAGGAACT...GCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR GCA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAAAGCCGCTGGACACCTaGAACTCCATCCTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLKPLDT*NSILSF
Trigger: AAAGCTAAGGATGGAGTTGCAGGTGTCCAGCGGCTT...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp GGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCGCTCGATCTCCTGGCTTaGAGGATTCATTATGCTAAA +
Preference number: 4 (lower is better)
Translates to: GWQKMSQGPFSHKEAFRPLDLLA*RIHYAK
Trigger: TTTAGCATAATGAATCCTCCAAGCCAGGAGATCGAG...CGGCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS-3UTR GCA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAAGTTCCTGTGAAATCTaGGTGGACTGGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLSSCEI*VDWDFC
Trigger: GCAGAAATCCCAGTCCACGCAGATTTCACAGGAACT...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CCA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAATCTGGTCACCGTGGTaGCTTTCCAAGTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLIWSPW*LSKFLE
Trigger: TTCCAAGAACTTGGAAAGCCACCACGGTGACCAGAT...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS CCA 90 bp GACCGGAGCCCCGCATCATCACGCAGTCCTCGCCCTGGCTCCGGCTaGTGGGCTCCCCTGGAGCCCAGTTGCTGTAGTCCACGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: DRSPASSRSPRPGSG*WAPLEPSCCSPRGS
Trigger: GGAGCCACGTGGACTACAGCAACTGGGCTCCAGGGGAGCCCACCAGCCGGAGCCAGGGCGAGGACTGCGTGATGATGCGGGGCTCCGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CCA 90 bp CGGAGCCCCGCATCATCACGCAGTCCTCGCCCTGGCTCCGGCTGGTaGGCTCCCCTGGAGCCCAGTTGCTGTAGTCCACGTGGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: RSPASSRSPRPGSGW*APLEPSCCSPRGSH
Trigger: ATGGGAGCCACGTGGACTACAGCAACTGGGCTCCAGGGGAGCCCACCAGCCGGAGCCAGGGCGAGGACTGCGTGATGATGCGGGGCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS TCA 90 bp AGCCCAGCCCACAGAGCGGCGGTCACCAGCCCCAGCAGCACGATCTaGGTCCCACGCCTGCAACACCGCCTCCTGGGAAGCTCCTCGATC +
Preference number: 5 (lower is better)
Translates to: SPAHRAAVTSPSSTI*VPRLQHRLLGSSSI
Trigger: GATCGAGGAGCTTCCCAGGAGGCGGTGTTGCAGGCGTGGGACTCAGATCGTGCTGCTGGGGCTGGTGACCGCCGCTCTGTGGGCTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000593418.1
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS GCA 90 bp AATCAGGTCCCATGGACTCCGCGGAACCTTCGCTGGCTGGCGGCGTaGATGTGGCCAGCCGGTCGCACACCCAGGCGCCCAGCTTACGGT +
Preference number: 5 (lower is better)
Translates to: NQVPWTPRNLRWLAA*MWPAGRTPRRPAYG
Trigger: ACCGTAAGCTGGGCGCCTGGGTGTGCGACCGGCTGGCCACATGCACGCCGCCAGCCAGCGAAGGTTCCGCGGAGTCCATGGGACCTGATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS GCA 90 bp GAGCGGCGGTCACCAGCCCCAGCAGCACGATCTGAGTCCCACGCCTaGAACACCGCCTCCTGGGAAGCTCCTCGATCTCCTGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: ERRSPAPAARSESHA*NTASWEAPRSPGLE
Trigger: CTCCAAGCCAGGAGATCGAGGAGCTTCCCAGGAGGCGGTGTTGCAGGCGTGGGACTCAGATCGTGCTGCTGGGGCTGGTGACCGCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS CCA 90 bp GGCCTGGCTGTATCCATGCTCAAGAGTGGAGAGGGGCAGAGGGGGTaGGCAGGCGGCCGTCAGGGTCTGGTCTTGAATCAGGTCCCATGG +
Preference number: 5 (lower is better)
Translates to: GLAVSMLKSGEGQRG*AGGRQGLVLNQVPW
Trigger: CCATGGGACCTGATTCAAGACCAGACCCTGACGGCCGCCTGCCCACCCCCTCTGCCCCTCTCCACTCTTGAGCATGGATACAGCCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS-3UTR CAA 90 bp ACTCCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTGGCCTCTGACTCTATaGGGCTCCCCGCTCCCTAGC +
Preference number: 5 (lower is better)
Translates to: TPGKAGAIEEREMCQLPPWPLTL*GSPLPS
Trigger: GCTAGGGAGCGGGGAGCCCAATAGAGTCAGAGGCCA...CGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS-3UTR CAA 90 bp CCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGTCGACCAGAGCGATaGGCAGGGACCGTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: PGKAGAIEEREMCQLPPFGRPER*AGTVRD
Trigger: GTCTCTGACGGTCCCTGCCAATCGCTCTGGTCGACC...AAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346664.9
ENST00000597921.6
CDS GCA 90 bp GAGCGGCGGTCACCAGCCCCAGCAGCACGATCTGAGTCCCACGCCTaGAACACCGCCTCCTGGGAAGCTCCTCGATCTCTGAATATTGAC +
Preference number: 5 (lower is better)
Translates to: ERRSPAPAARSESHA*NTASWEAPRSLNID
Trigger: GTCAATATTCAGAGATCGAGGAGCTTCCCAGGAGGCGGTGTTGCAGGCGTGGGACTCAGATCGTGCTGCTGGGGCTGGTGACCGCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000593418.1
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS-3UTR CAA 90 bp GGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGGCTGCTCAGATCTGCTaGAAGCCCGTTCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: GKAGAIEEREMCQLPPFGAAQIC*KPVQVP
Trigger: TGGAACCTGAACGGGCTTCAAGCAGATCTGAGCAGC...CCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS CCA 90 bp AGACGTTCCGGGCAGCCCTCTCTTCCAGCTGTTTTAGACTCTGTGTaGTGTCCCAGTGCCACAGGAGAAGCAGAGTCAGCAGCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: RRSGQPSLPAVLDSV*CPSATGEAESAAQP
Trigger: GGGCTGGGCTGCTGACTCTGCTTCTCCTGTGGCACTGGGACACCACACAGAGTCTAAAACAGCTGGAAGAGAGGGCTGCCCGGAACGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000593418.1
ENST00000597921.6
ENST00000597934.1
CDS-3UTR CAA 90 bp GGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGCACTGCCCCATTTTATaGATGCAGGCTGGACAGGAG +
Preference number: 5 (lower is better)
Translates to: GKAGAIEEREMCQLPPFGHCPIL*MQAGQE
Trigger: CTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTG...CCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS TCA 90 bp TGGCGGTCCTGCTTGGATTCTCCCGATGATGGAGCACTCACTCCCTaGCAACGCAGTCCACTCAGCGGGCACAATCACAGCTCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: WRSCLDSPDDGALTP*QRSPLSGHNHSSGH
Trigger: GTGACCAGAGCTGTGATTGTGCCCGCTGAGTGGACTGCGTTGTCAGGGAGTGAGTGCTCCATCATCGGGAGAATCCAAGCAGGACCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS TCA 90 bp TGGCGGTCCTGCTTGGATTCTCCCGATGATGGAGCACTCACTCCCTaGCAACGCAGTCCACTCAGCGGGCACAATCACAGCTCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: WRSCLDSPDDGALTP*QRSPLSGHNHSSGS
Trigger: GCTACCAGAGCTGTGATTGTGCCCGCTGAGTGGACTGCGTTGTCAGGGAGTGAGTGCTCCATCATCGGGAGAATCCAAGCAGGACCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597312.5
CDS-3UTR CAA 90 bp AGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAATTTTCAGGGCACGTGTaGCACACAAAGCCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: RGHRGAGDVSAASVWVAEFSGHV*HTKPLD
Trigger: GTCCAGCGGCTTTGTGTGCAACACGTGCCCTGAAAA...TTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp GCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCTGGGGTGCTCACTGCCCCATTTTATaGATGCAGGCTGGACAGGAG +
Preference number: 5 (lower is better)
Translates to: AGQEDSPPELGILRSWGAHCPIL*MQAGQE
Trigger: CTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTG...AGCACCCCAGGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp TCAGCCACAAAGAGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCTGGTCGACCAGAGCGATaGGCAGGGACCGTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: SATKRLLGRGWGSSGSCSGRPER*AGTVRD
Trigger: GTCTCTGACGGTCCCTGCCAATCGCTCTGGTCGACC...AGAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCTCTTTGTGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346664.9
ENST00000597921.6
CDS-3UTR CAA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCGTCAGCTGCCTCCGTTaGGGTGGCAGAAAATGTCAC +
Preference number: 5 (lower is better)
Translates to: LMQAGQEDSPPELGILRSVSCLR*GGRKCH
Trigger: GTGACATTTTCTGCCACCCAAACGGAGGCAGCTGAC...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS TCA 90 bp GCGTGGTTAGCAGGGAGACACAGCTGGTGTGGAGAGATAGCAGCCTaGGATCAGAAGTGGGGCACTCCAGAGCCCATCACACTTGAGCTA +
Preference number: 5 (lower is better)
Translates to: AWLAGRHSWCGEIAA*DQKWGTPEPITLEL
Trigger: TAGCTCAAGTGTGATGGGCTCTGGAGTGCCCCACTTCTGATCTCAGGCTGCTATCTCTCCACACCAGCTGTGTCTCCCTGCTAACCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593418.1
ENST00000597312.5
CDS-3UTR CAA 90 bp GGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGAAGTTCCTGTTCTATTaGGCCTCTGACTCTATTGGG +
Preference number: 5 (lower is better)
Translates to: GKAGAIEEREMCQLPPFGKFLFY*ASDSIG
Trigger: CCCAATAGAGTCAGAGGCCAAATAGAACAGGAACTT...CCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS-3UTR CAA 90 bp TTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCAGGTCCCAAGTTCTTGGAAACTaGAGAGACGTTCCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LMQAGQEDSPPELGILRSQVLGN*RDVPGS
Trigger: GCTGCCCGGAACGTCTCTCAAGTTTCCAAGAACTTG...GGACCTGAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp GGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGCTGCTCAGATCTGCTaGAAGCCCGTTCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: GHRGAGDVSAASVWVAENAAQIC*KPVQVP
Trigger: TGGAACCTGAACGGGCTTCAAGCAGATCTGAGCAGC...ATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp CCTGGGAAGGCAGGGGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTCACTTCCGTTGGAAATaGATCCACTTTTCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: PGKAGAIEEREMCQLPPFHFRWK*IHFSGH
Trigger: GTGCCCTGAAAAGTGGATCAATTTCCAACGGAAGTG...AAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCCCCTGCCTTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS CCA 90 bp CACTCCCTGACAACGCAGTCCACTCAGCGGGCACAATCACAGCTCTaGTTAGTGGAGTTTGGAGCCTGTGTCTGTCCTCCTAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: HSLTTQSTQRAQSQL*LVEFGACVCPPSVL
Trigger: CAACACACTAGGAGGACAGACACAGGCTCCAAACTCCACTAACCAGAGCTGTGATTGTGCCCGCTGAGTGGACTGCGTTGTCAGGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346664.9
CDS-3UTR CAA 90 bp GGCCATAGAGGAGCGGGAGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATCAAGTTCTTGGAAACTaGAGAGACGTTCCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GHRGAGDVSAASVWVAENQVLGN*RDVPGS
Trigger: GCTGCCCGGAACGTCTCTCAAGTTTCCAAGAACTTG...ATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCTCCCGCTCCTCTATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp GCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCGCTGCTCAGATCTGCTaGAAGCCCGTTCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: ASVWVAENVTGTFQPQRGAAQIC*KPVQVP
Trigger: TGGAACCTGAACGGGCTTCAAGCAGATCTGAGCAGC...GCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp AGGCCATCACTGCCCCATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTTTTCAGGGCACGTGTaGCACACAAAGCCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: RPSLPHFIDAGWTGGLTTFSGHV*HTKPLD
Trigger: GTCCAGCGGCTTTGTGTGCAACACGTGCCCTGAAAA...GGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTGATGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp ATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCGCTTTTAGGCCGTGGTaGGGGGTCTTCAGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: ILLMQAGQEDSPPELGILAFRPW*GVFRVL
Trigger: CAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGC...GAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp AGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCTTTTAGGCCGTGGTaGGGGGTCTTCAGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: RCVSCLRLGGRKCHRDLSAFRPW*GVFRVL
Trigger: CAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGC...TGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp AGATGTGTCAGCTGCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCATGTCCTCCTAGTGTGTaGGGGTCGACCAGAGCGATT +
Preference number: 5 (lower is better)
Translates to: RCVSCLRLGGRKCHRDLSCPPSV*GSTRAI
Trigger: AATCGCTCTGGTCGACCCCAACACACTAGGAGGACA...TGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGCAGCTGACACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346664.9
ENST00000597921.6
CDS-3UTR CAA 90 bp ATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCTGTCCTCCTAGTGTGTaGGGGTCGACCAGAGCGATT +
Preference number: 5 (lower is better)
Translates to: ILLMQAGQEDSPPELGILCPPSV*GSTRAI
Trigger: AATCGCTCTGGTCGACCCCAACACACTAGGAGGACA...GAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346664.9
ENST00000597921.6
CDS TCA 90 bp ACTGCTTGGTGCCCTTGCCGAAGTAGTAGCACTTCCGTTGGAAATTaGTCCACTTTTCAGGGCACGTGTTGCACACAAAGCCGCTGGACA +
Preference number: 5 (lower is better)
Translates to: TAWCPCRSSSTSVGN*STFQGTCCTQSRWT
Trigger: TGTCCAGCGGCTTTGTGTGCAACACGTGCCCTGAAAAGTGGATCAATTTCCAACGGAAGTGCTACTACTTCGGCAAGGGCACCAAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS-3UTR CAA 90 bp TTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCTTTTCAGGGCACGTGTaGCACACAAAGCCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LGGRKCHRDLSATKRLLGFSGHV*HTKPLD
Trigger: GTCCAGCGGCTTTGTGTGCAACACGTGCCCTGAAAA...GCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp GCCTCCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCCACTTCCGTTGGAAATaGATCCACTTTTCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: ASVWVAENVTGTFQPQRGHFRWK*IHFSGH
Trigger: GTGCCCTGAAAAGTGGATCAATTTCCAACGGAAGTG...GCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGCTTTTAGGCCGTGGTaGGGGGTCTTCAGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLAFRPW*GVFRVL
Trigger: CAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGC...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp CCGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTGTCAGCTGCCTCCGTTaGGGTGGCAGAAAATGTCAC +
Preference number: 5 (lower is better)
Translates to: PFGWQKMSQGPFSHKEAFVSCLR*GGRKCH
Trigger: GTGACATTTTCTGCCACCCAAACGGAGGCAGCTGAC...AAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp ATTTTATTGATGCAGGCTGGACAGGAGGACTCACCACCTGAGCTGGGGATACTCCACTGCCCCATTTTATaGATGCAGGCTGGACAGGAG +
Preference number: 5 (lower is better)
Translates to: ILLMQAGQEDSPPELGILHCPIL*MQAGQE
Trigger: CTCCTGTCCAGCCTGCATCAATAAAATGGGGCAGTG...GAGTATCCCCAGCTCAGGTGGTGAGTCCTCCTGTCCAGCCTGCATCAATAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS CCA 90 bp CACTCCCTGACAACGCAGTCCACTCAGCGGGCACAATCACAGCTCTaGCTGATTTGGGATTTAATGATGGTTAGGGTGAGCCATCAAATC +
Preference number: 5 (lower is better)
Translates to: HSLTTQSTQRAQSQL*LIWDLMMVRVSHQI
Trigger: GATTTGATGGCTCACCCTAACCATCATTAAATCCCAAATCAGCCAGAGCTGTGATTGTGCCCGCTGAGTGGACTGCGTTGTCAGGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593418.1
CDS-3UTR CAA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGTCAGCTGCCTCCGTTaGGGTGGCAGAAAATGTCAC +
Preference number: 5 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLVSCLR*GGRKCH
Trigger: GTGACATTTTCTGCCACCCAAACGGAGGCAGCTGAC...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS-3UTR CAA 90 bp CGTTTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTACAAGTTCTTGGAAACTaGAGAGACGTTCCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RLGGRKCHRDLSATKRLLQVLGN*RDVPGS
Trigger: GCTGCCCGGAACGTCTCTCAAGTTTCCAAGAACTTG...TAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS TCA 90 bp CACAGGATAGCATCTGGGACTTGGTGGCACTCAGGGGCCATTTGCTaGTTTTGTTTAGTCTACAATCTGGACTCACTAGCGTGGTTAGCA +
Preference number: 5 (lower is better)
Translates to: HRIASGTWWHSGAIC*FCLVYNLDSLAWLA
Trigger: TGCTAACCACGCTAGTGAGTCCAGATTGTAGACTAAACAAAATCAGCAAATGGCCCCTGAGTGCCACCAAGTCCCAGATGCTATCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593418.1
CDS CCA 90 bp ACAACGCAGTCCACTCAGCGGGCACAATCACAGCTCTGGCTGATTTaGGATTTAATGATGGTTAGGGTGAGCCATCAAATCCTAGTTACC +
Preference number: 5 (lower is better)
Translates to: TTQSTQRAQSQLWLI*DLMMVRVSHQILVT
Trigger: GGTAACTAGGATTTGATGGCTCACCCTAACCATCATTAAATCCCAAATCAGCCAGAGCTGTGATTGTGCCCGCTGAGTGGACTGCGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593418.1
CDS-3UTR CAA 90 bp TTGGGTGGCAGAAAATGTCACAGGGACCTTTCAGCCACAAAGAGGCTTTTAGGCCACTTCCGTTGGAAATaGATCCACTTTTCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: LGGRKCHRDLSATKRLLGHFRWK*IHFSGH
Trigger: GTGCCCTGAAAAGTGGATCAATTTCCAACGGAAGTG...GCCTAAAAGCCTCTTTGTGGCTGAAAGGTCCCTGTGACATTTTCTGCCACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597921.6
CDS GCA 72 bp CCATGGACTCCGCGGAACCTTCGCTGGCTGGCGGCGTaGATGTGGCCAGCCGGTCGCACACCCAGGCGCCCA +
Preference number: 6 (lower is better)
Translates to: PWTPRNLRWLAA*MWPAGRTPRRP
Trigger: TGGGCGCCTGGGTGTGCGACCGGCTGGCCACATGCACGCCGCCAGCCAGCGAAGGTTCCGCGGAGTCCATGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CCA 72 bp CGACCGGAGCCCCGCATCATCACGCAGTCCTCGCCCTaGCTCCGGCTGGTGGGCTCCCCTGGAGCCCAGTTG +
Preference number: 6 (lower is better)
Translates to: RPEPRIITQSSP*LRLVGSPGAQL
Trigger: CAACTGGGCTCCAGGGGAGCCCACCAGCCGGAGCCAGGGCGAGGACTGCGTGATGATGCGGGGCTCCGGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS TCA 72 bp CACAGAGCGGCGGTCACCAGCCCCAGCAGCACGATCTaGGTCCCACGCCTGCAACACCGCCTCCTGGGAAGC +
Preference number: 6 (lower is better)
Translates to: HRAAVTSPSSTI*VPRLQHRLLGS
Trigger: GCTTCCCAGGAGGCGGTGTTGCAGGCGTGGGACTCAGATCGTGCTGCTGGGGCTGGTGACCGCCGCTCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000593418.1
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CCA 72 bp CCCGCATCATCACGCAGTCCTCGCCCTGGCTCCGGCTaGTGGGCTCCCCTGGAGCCCAGTTGCTGTAGTCCA +
Preference number: 6 (lower is better)
Translates to: PASSRSPRPGSG*WAPLEPSCCSP
Trigger: TGGACTACAGCAACTGGGCTCCAGGGGAGCCCACCAGCCGGAGCCAGGGCGAGGACTGCGTGATGATGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CCA 72 bp GCATCATCACGCAGTCCTCGCCCTGGCTCCGGCTGGTaGGCTCCCCTGGAGCCCAGTTGCTGTAGTCCACGT +
Preference number: 6 (lower is better)
Translates to: ASSRSPRPGSGW*APLEPSCCSPR
Trigger: ACGTGGACTACAGCAACTGGGCTCCAGGGGAGCCCACCAGCCGGAGCCAGGGCGAGGACTGCGTGATGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS GCA 72 bp TCACCAGCCCCAGCAGCACGATCTGAGTCCCACGCCTaGAACACCGCCTCCTGGGAAGCTCCTCGATCTCCT +
Preference number: 6 (lower is better)
Translates to: SPAPAARSESHA*NTASWEAPRSP
Trigger: AGGAGATCGAGGAGCTTCCCAGGAGGCGGTGTTGCAGGCGTGGGACTCAGATCGTGCTGCTGGGGCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS GCA 72 bp TTCCGAAGGCCAATCCAGGAGCCGGTGTGGCTGGCATaGTTGGTCAGGAAGTCCTGCTCCTCCGGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: FRRPIQEPVWLA*LVRKSCSSGLW
Trigger: CCACAGCCCGGAGGAGCAGGACTTCCTGACCAAGCATGCCAGCCACACCGGCTCCTGGATTGGCCTTCGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS GCA 72 bp TCACCAGCCCCAGCAGCACGATCTGAGTCCCACGCCTaGAACACCGCCTCCTGGGAAGCTCCTCGATCTCTG +
Preference number: 6 (lower is better)
Translates to: SPAPAARSESHA*NTASWEAPRSL
Trigger: CAGAGATCGAGGAGCTTCCCAGGAGGCGGTGTTGCAGGCGTGGGACTCAGATCGTGCTGCTGGGGCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000593418.1
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS GCA 72 bp CCGTTCAGGTTCCAGGACAGCTCCAAGTCTGGTGTGTaGAGGAGCGCAGGGCTGGTCTCAGGGAGGATGTGT +
Preference number: 6 (lower is better)
Translates to: PFRFQDSSKSGV*RSAGLVSGRMC
Trigger: ACACATCCTCCCTGAGACCAGCCCTGCGCTCCTGCACACACCAGACTTGGAGCTGTCCTGGAACCTGAACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597934.1
CDS CCA 72 bp GCACGATCTGAGTCCCACGCCTGCAACACCGCCTCCTaGGAAGCTCCTCGATCTCCTGGCTTGGAGGATTCA +
Preference number: 6 (lower is better)
Translates to: ARSESHACNTAS*EAPRSPGLEDS
Trigger: TGAATCCTCCAAGCCAGGAGATCGAGGAGCTTCCCAGGAGGCGGTGTTGCAGGCGTGGGACTCAGATCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360067.8
CDS CCA 72 bp TGTCGTCACAGGCATACCGGGCGTGGACCCACTGCTTaGTGCCCTTGCCGAAGTAGTAGCACTTCCGTTGGA +
Preference number: 6 (lower is better)
Translates to: CRHRHTGRGPTA*CPCRSSSTSVG
Trigger: TCCAACGGAAGTGCTACTACTTCGGCAAGGGCACCAAGCAGTGGGTCCACGCCCGGTATGCCTGTGACGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CAA 72 bp TGCCTGCACCCCACCTCCCAGCTGGGGATGGAGGTCTaGGGTATAAGCCATGGAGGTGCTGAAAGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: CLHPTSQLGMEV*GISHGGAESVE
Trigger: CTCCACACTTTCAGCACCTCCATGGCTTATACCCAAGACCTCCATCCCCAGCTGGGAGGTGGGGTGCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597312.5
ENST00000598803.5
CDS CAA 90 bp CTCTGGTTAGTGGAGTTTGGAGCCTGTGTCTGTCCTCCTAGTGTGTaGGGGTCGACCAGAGCGATTGGCAGGGACCGTCAGAGACAGAGG +
Preference number: 6 (lower is better)
Translates to: LWLVEFGACVCPPSV*GSTRAIGRDRQRQR
Trigger: CCTCTGTCTCTGACGGTCCCTGCCAATCGCTCTGGTCGACCCCAACACACTAGGAGGACAGACACAGGCTCCAAACTCCACTAACCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346664.9
CDS CAA 90 bp GGTCACTTAGTGGAGTTTGGAGCCTGTGTCTGTCCTCCTAGTGTGTaGGGGTCGACCAGAGCGATTGGCAGGGACCGTCAGAGACAGAGG +
Preference number: 6 (lower is better)
Translates to: GHLVEFGACVCPPSV*GSTRAIGRDRQRQR
Trigger: CCTCTGTCTCTGACGGTCCCTGCCAATCGCTCTGGTCGACCCCAACACACTAGGAGGACAGACACAGGCTCCAAACTCCACTAAGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597921.6
ENST00000597934.1
CDS TCA 72 bp GGGGATGGAGGTCTTGGGTATAAGCCATGGAGGTGCTaGAAGTGTGGAGGACAGGGATGCTGGGTGTGGGGT +
Preference number: 6 (lower is better)
Translates to: GDGGLGYKPWRC*KCGGQGCWVWG
Trigger: ACCCCACACCCAGCATCCCTGTCCTCCACACTTTCAGCACCTCCATGGCTTATACCCAAGACCTCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597312.5
ENST00000598803.5
CDS GCA 72 bp AGGCTTTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTaGTCTGGGCCTGGCTGTATCCATGCTCAAGAGTGG +
Preference number: 6 (lower is better)
Translates to: RLLGRGWGSSGS*SGPGCIHAQEW
Trigger: CCACTCTTGAGCATGGATACAGCCAGGCCCAGAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CCA 72 bp TTTAGGCCGTGGTTGGGGGTCTTCAGGGTCTTGCTCTaGGCCTGGCTGTATCCATGCTCAAGAGTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: FRPWLGVFRVLL*AWLYPCSRVER
Trigger: CCTCTCCACTCTTGAGCATGGATACAGCCAGGCCCAGAGCAAGACCCTGAAGACCCCCAACCACGGCCTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CAA 90 bp GAGCCTGTGTCTGTCCTCCTAGTGTGTTGGGGTCGACCAGAGCGATaGGCAGGGACCGTCAGAGACAGAGGTTTAAGCAGGAAGAGAGAC +
Preference number: 6 (lower is better)
Translates to: EPVSVLLVCWGRPER*AGTVRDRGLSRKRD
Trigger: GTCTCTCTTCCTGCTTAAACCTCTGTCTCTGACGGTCCCTGCCAATCGCTCTGGTCGACCCCAACACACTAGGAGGACAGACACAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000597921.6
ENST00000597934.1
CDS CCA 72 bp GCGCCATCTGGTCACCGTGGTGGCTTTCCAAGTTCTTaGAAACTTGAGAGACGTTCCGGGCAGCCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: APSGHRGGFPSS*KLERRSGQPSL
Trigger: AAGAGAGGGCTGCCCGGAACGTCTCTCAAGTTTCCAAGAACTTGGAAAGCCACCACGGTGACCAGATGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000593418.1
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CCA 72 bp GCACGATCTGAGTCCCACGCCTGCAACACCGCCTCCTaGGAAGCTCCTCGATCTCTGAATATTGACCTTCCT +
Preference number: 6 (lower is better)
Translates to: ARSESHACNTAS*EAPRSLNIDLP
Trigger: AGGAAGGTCAATATTCAGAGATCGAGGAGCTTCCCAGGAGGCGGTGTTGCAGGCGTGGGACTCAGATCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000593418.1
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CCA 72 bp GTCCACTCAGCGGGCACAATCACAGCTCTGGTAGCGTaGTTAGCAGGGAGACACAGCTGGTGTGGAGAGATA +
Preference number: 6 (lower is better)
Translates to: VHSAGTITALVA*LAGRHSWCGEI
Trigger: TATCTCTCCACACCAGCTGTGTCTCCCTGCTAACCACGCTACCAGAGCTGTGATTGTGCCCGCTGAGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597312.5
CDS CAA 72 bp TCTGTCCTCCTAGTGTGTTGGGGTCGACCAGAGCGATaGGCAGGGACCGTCAGAGACAGAGGTTTAAGCAGG +
Preference number: 6 (lower is better)
Translates to: SVLLVCWGRPER*AGTVRDRGLSR
Trigger: CCTGCTTAAACCTCTGTCTCTGACGGTCCCTGCCAATCGCTCTGGTCGACCCCAACACACTAGGAGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346664.9
ENST00000597921.6
ENST00000597934.1
CDS CCA 72 bp ACAACGCAGTCCACTCAGCGGGCACAATCACAGCTCTaGTTAGTGGAGTTTGGAGCCTGTGTCTGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: TTQSTQRAQSQL*LVEFGACVCPP
Trigger: AGGAGGACAGACACAGGCTCCAAACTCCACTAACCAGAGCTGTGATTGTGCCCGCTGAGTGGACTGCGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346664.9
CDS CCA 72 bp ACAACGCAGTCCACTCAGCGGGCACAATCACAGCTCTaGTCACTTAGTGGAGTTTGGAGCCTGTGTCTGTCC +
Preference number: 6 (lower is better)
Translates to: TTQSTQRAQSQL*SLSGVWSLCLS
Trigger: GGACAGACACAGGCTCCAAACTCCACTAAGTGACCAGAGCTGTGATTGTGCCCGCTGAGTGGACTGCGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS GCA 72 bp CGATCTCTGAATATTGACCTTCCTCCATGGCGGTCCTaGTTGGATTCTCCCGATGATGGAGCACTCACTCCC +
Preference number: 6 (lower is better)
Translates to: RSLNIDLPPWRS*LDSPDDGALTP
Trigger: GGGAGTGAGTGCTCCATCATCGGGAGAATCCAAGCAGGACCGCCATGGAGGAAGGTCAATATTCAGAGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000593418.1
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CAA 90 bp GTGGACCCACTGCTTGGTGCCCTTGCCGAAGTAGTAGCACTTCCGTaGGAAATTGATCCACTTTTCAGGGCACGTGTTGCACACAAAGCC +
Preference number: 6 (lower is better)
Translates to: VDPLLGALAEVVALP*EIDPLFRARVAHKA
Trigger: GGCTTTGTGTGCAACACGTGCCCTGAAAAGTGGATCAATTTCCAACGGAAGTGCTACTACTTCGGCAAGGGCACCAAGCAGTGGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CCA 72 bp GAAGCTCCTCGATCTCTGAATATTGACCTTCCTCCATaGCGGTCCTGCTTGGATTCTCCCGATGATGGAGCA +
Preference number: 6 (lower is better)
Translates to: EAPRSLNIDLPP*RSCLDSPDDGA
Trigger: TGCTCCATCATCGGGAGAATCCAAGCAGGACCGCCATGGAGGAAGGTCAATATTCAGAGATCGAGGAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000593418.1
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CCA 72 bp TGTGAAATCTGCGTGGACTGGGATTTCTGCGCCATCTaGTCACCGTGGTGGCTTTCCAAGTTCTTGGAAACT +
Preference number: 6 (lower is better)
Translates to: CEICVDWDFCAI*SPWWLSKFLET
Trigger: AGTTTCCAAGAACTTGGAAAGCCACCACGGTGACCAGATGGCGCAGAAATCCCAGTCCACGCAGATTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000593418.1
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS CCA 72 bp ACAACGCAGTCCACTCAGCGGGCACAATCACAGCTCTaGCTGATTTGGGATTTAATGATGGTTAGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: TTQSTQRAQSQL*LIWDLMMVRVS
Trigger: GCTCACCCTAACCATCATTAAATCCCAAATCAGCCAGAGCTGTGATTGTGCCCGCTGAGTGGACTGCGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593418.1
CDS CAA 90 bp GATAGCATCTGGGACTTGGTGGCACTCAGGGGCCATTTGCTGATTTaGTTTAGTCTACAATCTGGACTCACTAGCGTGGTTAGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: DSIWDLVALRGHLLI*FSLQSGLTSVVSRE
Trigger: CTCCCTGCTAACCACGCTAGTGAGTCCAGATTGTAGACTAAACAAAATCAGCAAATGGCCCCTGAGTGCCACCAAGTCCCAGATGCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593418.1
CDS CAA 90 bp CCAGCACAGGATAGCATCTGGGACTTGGTGGCACTCAGGGGCCATTaGCTGATTTTGTTTAGTCTACAATCTGGACTCACTAGCGTGGTT +
Preference number: 6 (lower is better)
Translates to: PAQDSIWDLVALRGH*LILFSLQSGLTSVV
Trigger: AACCACGCTAGTGAGTCCAGATTGTAGACTAAACAAAATCAGCAAATGGCCCCTGAGTGCCACCAAGTCCCAGATGCTATCCTGTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593418.1
CDS TCA 72 bp CTTTGTCACCTCCTCCCGGAGTCTTTCCAGCAAATCTaGAGCTTCGTTCCTCTCGTTCAATTCCTGGGACTT +
Preference number: 6 (lower is better)
Translates to: LCHLLPESFQQI*SFVPLVQFLGL
Trigger: AAGTCCCAGGAATTGAACGAGAGGAACGAAGCTTCAGATTTGCTGGAAAGACTCCGGGAGGAGGTGACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS TCA 72 bp TGCCCTTGCCGAAGTAGTAGCACTTCCGTTGGAAATTaGTCCACTTTTCAGGGCACGTGTTGCACACAAAGC +
Preference number: 6 (lower is better)
Translates to: CPCRSSSTSVGN*STFQGTCCTQS
Trigger: GCTTTGTGTGCAACACGTGCCCTGAAAAGTGGATCAATTTCCAACGGAAGTGCTACTACTTCGGCAAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346664.9
ENST00000360067.8
ENST00000597312.5
ENST00000597921.6
ENST00000597934.1
ENST00000598803.5
CDS TCA 72 bp GCATCTGGGACTTGGTGGCACTCAGGGGCCATTTGCTaGTTTTGTTTAGTCTACAATCTGGACTCACTAGCG +
Preference number: 6 (lower is better)
Translates to: ASGTWWHSGAIC*FCLVYNLDSLA
Trigger: CGCTAGTGAGTCCAGATTGTAGACTAAACAAAATCAGCAAATGGCCCCTGAGTGCCACCAAGTCCCAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593418.1
CDS CAA 72 bp TGGGACTTGGTGGCACTCAGGGGCCATTTGCTGATTTaGTTTAGTCTACAATCTGGACTCACTAGCGTGGTT +
Preference number: 6 (lower is better)
Translates to: WDLVALRGHLLI*FSLQSGLTSVV
Trigger: AACCACGCTAGTGAGTCCAGATTGTAGACTAAACAAAATCAGCAAATGGCCCCTGAGTGCCACCAAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593418.1
CDS TCA 72 bp CTTTGTCACCTCCTCCCGGAGTCTTTCCAGCAAATCTaGAGCTTCGTTCCTCTCGTTCAATTCCTGAGATTT +
Preference number: 6 (lower is better)
Translates to: LCHLLPESFQQI*SFVPLVQFLRF
Trigger: AAATCTCAGGAATTGAACGAGAGGAACGAAGCTTCAGATTTGCTGGAAAGACTCCGGGAGGAGGTGACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593418.1
CDS CAA 72 bp GATAGCATCTGGGACTTGGTGGCACTCAGGGGCCATTaGCTGATTTTGTTTAGTCTACAATCTGGACTCACT +
Preference number: 6 (lower is better)
Translates to: DSIWDLVALRGH*LILFSLQSGLT
Trigger: AGTGAGTCCAGATTGTAGACTAAACAAAATCAGCAAATGGCCCCTGAGTGCCACCAAGTCCCAGATGCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593418.1