Pregenerated sensors for FBXW12 (Homo sapiens)
Ensembl gene IDs: ENSG00000164049Ensembl transcript IDs: ENST00000296438.9, ENST00000415155.5, ENST00000436231.5, ENST00000445170.5, ENST00000468158.1, ENST00000477542.5
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCCTCTCACTGACTGGGCCTCTGGAGAGAAGGGCAGGGACATTCTaGCATGTGGCAGGAGCCACTCTGTGTCATGGGGTTGGATCCCAA | + |
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Preference number: 5 (lower is better) Translates to: LLSLTGPLERRAGTF*HVAGATLCHGVGSQ Trigger: TTGGGATCCAACCCCATGACACAGAGTGGCTCCTGCCACATGCCAGAATGTCCCTGCCCTTCTCTCCAGAGGCCCAGTCAGTGAGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS TCA 90 bp | AAGCTGGCACAGAGCTGCAGGCTCTGGGAAGCCAATAAGGGATGGTaGAGCACAGCTGTTACCAGTCCTGGGCTCTGTAATCCCAGTTAC | + |
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Preference number: 5 (lower is better) Translates to: KLAQSCRLWEANKGW*STAVTSPGLCNPSY Trigger: GTAACTGGGATTACAGAGCCCAGGACTGGTAACAGCTGTGCTTCACCATCCCTTATTGGCTTCCCAGAGCCTGCAGCTCTGTGCCAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS TCA 90 bp | GTTGTCCAGGTGGCCATGAAGAGAACCTCTGGAGGTCTAGGAATGTaGAGCTCAGATTTTGGAAACCTGGTCCGGTGTCCTGGGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: VVQVAMKRTSGGLGM*SSDFGNLVRCPGPQ Trigger: CTGTGGCCCAGGACACCGGACCAGGTTTCCAAAATCTGAGCTTCACATTCCTAGACCTCCAGAGGTTCTCTTCATGGCCACCTGGACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS GCA 90 bp | CCGGTGTCCTGGGCCACAGGTAAGTGGCTGAAGCTGGTGGTTTGCTaGCATCTTCTGGCCATAGTGTGGAATTTATCAGAAGCAGCTACC | + |
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Preference number: 5 (lower is better) Translates to: PVSWATGKWLKLVVC*HLLAIVWNLSEAAT Trigger: GGTAGCTGCTTCTGATAAATTCCACACTATGGCCAGAAGATGGCAGCAAACCACCAGCTTCAGCCACTTACCTGTGGCCCAGGACACCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS CCA 90 bp | TGGGCCATCCTTTGTAAGATAGGCTTCCATGCAATAACAGGGCTGTaGCATGGGGAGAACAGCCAGAGCGTCCCTGTCCTGACAGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: WAILCKIGFHAITGL*HGENSQSVPVLTVP Trigger: TGGAACTGTCAGGACAGGGACGCTCTGGCTGTTCTCCCCATGCCACAGCCCTGTTATTGCATGGAAGCCTATCTTACAAAGGATGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000296438.9 ENST00000436231.5 ENST00000445170.5 ENST00000477542.5 |
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| CDS CCA 90 bp | GGGATCTTGAATCTGGTGAGTGGGGCTCATCTCTCAGCGCCAGCATaGCCTCTGGGTTTCTACCTTCTCGCATTTAACTTTGCAGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: GILNLVSGAHLSAPA*PLGFYLLAFNFAVE Trigger: CTCCACTGCAAAGTTAAATGCGAGAAGGTAGAAACCCAGAGGCCATGCTGGCGCTGAGAGATGAGCCCCACTCACCAGATTCAAGATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296438.9 |
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| CDS TCA 90 bp | GCTTCAAAGCTAAGTCAGGCAATCGGATCTCCATTTCATGCGGCCTaGACCCACATCCACTTTCCTTTCTCCTCTCCGGGCTGCTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: ASKLSQAIGSPFHAA*THIHFPFSSPGCSE Trigger: TTCAGAGCAGCCCGGAGAGGAGAAAGGAAAGTGGATGTGGGTTCAGGCCGCATGAAATGGAGATCCGATTGCCTGACTTAGCTTTGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296438.9 ENST00000415155.5 ENST00000477542.5 |
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| CDS CCA 90 bp | TCTAGGAATGTGAAGCTCAGATTTTGGAAACCTGGTCCGGTGTCCTaGGCCACAGGTAAGTGGCTGAAGCTGGTGGTTTGCTGCCATCTT | + |
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Preference number: 5 (lower is better) Translates to: SRNVKLRFWKPGPVS*ATGKWLKLVVCCHL Trigger: AAGATGGCAGCAAACCACCAGCTTCAGCCACTTACCTGTGGCCCAGGACACCGGACCAGGTTTCCAAAATCTGAGCTTCACATTCCTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS CCA 90 bp | CATGAAGAGAACCTCTGGAGGTCTAGGAATGTGAAGCTCAGATTTTaGAAACCTGGTCCGGTGTCCTGGGCCACAGGTAAGTGGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: HEENLWRSRNVKLRF*KPGPVSWATGKWLK Trigger: CTTCAGCCACTTACCTGTGGCCCAGGACACCGGACCAGGTTTCCAAAATCTGAGCTTCACATTCCTAGACCTCCAGAGGTTCTCTTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS GCA 90 bp | GCAGTGGAGGAGAATCATACATACCACCCAGAAGTTGTTGATGGCTaGCTGATGGTCCTCAAATCGTTGCAGCAGGAAGCCAGTGATGCT | + |
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Preference number: 5 (lower is better) Translates to: AVEENHTYHPEVVDG*LMVLKSLQQEASDA Trigger: AGCATCACTGGCTTCCTGCTGCAACGATTTGAGGACCATCAGGCAGCCATCAACAACTTCTGGGTGGTATGTATGATTCTCCTCCACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468158.1 ENST00000477542.5 |
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| CDS TCA 90 bp | TGGAGGAGAATCATACATACCACCCAGAAGTTGTTGATGGCTGCCTaGTGGTCCTCAAATCGTTGCAGCAGGAAGCCAGTGATGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: WRRIIHTTQKLLMAA*WSSNRCSRKPVMLK Trigger: CTTCAGCATCACTGGCTTCCTGCTGCAACGATTTGAGGACCATCAGGCAGCCATCAACAACTTCTGGGTGGTATGTATGATTCTCCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468158.1 ENST00000477542.5 |
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| CDS CCA 90 bp | ACAGAATGGTTTGCCAGTTGTCCAGGTGGCCATGAAGAGAACCTCTaGAGGTCTAGGAATGTGAAGCTCAGATTTTGGAAACCTGGTCCG | + |
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Preference number: 5 (lower is better) Translates to: TEWFASCPGGHEENL*RSRNVKLRFWKPGP Trigger: CGGACCAGGTTTCCAAAATCTGAGCTTCACATTCCTAGACCTCCAGAGGTTCTCTTCATGGCCACCTGGACAACTGGCAAACCATTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS TCA 90 bp | TCAAAAAGCAGTGGAGGAGAATCATACATACCACCCAGAAGTTGTTaGTGGCTGCCTGATGGTCCTCAAATCGTTGCAGCAGGAAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SKSSGGESYIPPRSC*WLPDGPQIVAAGSQ Trigger: CTGGCTTCCTGCTGCAACGATTTGAGGACCATCAGGCAGCCATCAACAACTTCTGGGTGGTATGTATGATTCTCCTCCACTGCTTTTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000468158.1 ENST00000477542.5 |
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| CDS GCA 90 bp | CCTGCAGCATCGCCAACCTCTTGCACATCCCAGGCACAAAGCTCTTaGTTTGGAGATACACTACAAATGATTGATTTCTCCTGTTCATCC | + |
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Preference number: 5 (lower is better) Translates to: PAASPTSCTSQAQSS*FGDTLQMIDFSCSS Trigger: GGATGAACAGGAGAAATCAATCATTTGTAGTGTATCTCCAAAGCAAGAGCTTTGTGCCTGGGATGTGCAAGAGGTTGGCGATGCTGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415155.5 |
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| CDS GCA 90 bp | TTCTCCTCTCCGGGCTGCTCTGAATTTATAGGCTTTGCCAAAGTCTaGAGCACTTGTAAAGATTTTCACCCATGCCCATCTTGGGATCTT | + |
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Preference number: 5 (lower is better) Translates to: FSSPGCSEFIGFAKV*STCKDFHPCPSWDL Trigger: AAGATCCCAAGATGGGCATGGGTGAAAATCTTTACAAGTGCTGCAGACTTTGGCAAAGCCTATAAATTCAGAGCAGCCCGGAGAGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415155.5 ENST00000477542.5 |
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| CDS CCA 90 bp | AGTTTCAGTTATCTGGATGATATGTGCACGTGTAAGGAAACAGAATaGTTTGCCAGTTGTCCAGGTGGCCATGAAGAGAACCTCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: SFSYLDDMCTCKETE*FASCPGGHEENLWR Trigger: CCTCCAGAGGTTCTCTTCATGGCCACCTGGACAACTGGCAAACCATTCTGTTTCCTTACACGTGCACATATCATCCAGATAACTGAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS GCA 90 bp | GACCAGATCATGGTACCCTCTTGCACATCCCAGGCACAAAGCTCTTaGTTTGGAGATACACTACAAATGATTGATTTCTCCTGTTCATCC | + |
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Preference number: 5 (lower is better) Translates to: DQIMVPSCTSQAQSS*FGDTLQMIDFSCSS Trigger: GGATGAACAGGAGAAATCAATCATTTGTAGTGTATCTCCAAAGCAAGAGCTTTGTGCCTGGGATGTGCAAGAGGGTACCATGATCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296438.9 ENST00000445170.5 ENST00000477542.5 |
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| CDS GCA 90 bp | GTGATGGCGAGATGCATCTCTTGCACATCCCAGGCACAAAGCTCTTaGTTTGGAGATACACTACAAATGATTGATTTCTCCTGTTCATCC | + |
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Preference number: 5 (lower is better) Translates to: VMARCISCTSQAQSS*FGDTLQMIDFSCSS Trigger: GGATGAACAGGAGAAATCAATCATTTGTAGTGTATCTCCAAAGCAAGAGCTTTGTGCCTGGGATGTGCAAGAGATGCATCTCGCCATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436231.5 |
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| CDS GCA 90 bp | TGTTGGGGTTTTATTGATAAGAGTTTCAGTTATCTGGATGATATGTaGACGTGTAAGGAAACAGAATGGTTTGCCAGTTGTCCAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: CWGFIDKSFSYLDDM*TCKETEWFASCPGG Trigger: GCCACCTGGACAACTGGCAAACCATTCTGTTTCCTTACACGTGCACATATCATCCAGATAACTGAAACTCTTATCAATAAAACCCCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS GCA 90 bp | GATGTTCTTAGTTACTTTGTAGATAAAGTTATGCGGCTGTGCCAATaGCAACCGAAGCTCCTTCCTTCTTTGATGCAGGAAAAATTGCTT | + |
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Preference number: 5 (lower is better) Translates to: DVLSYFVDKVMRLCQ*QPKLLPSLMQEKLL Trigger: AAGCAATTTTTCCTGCATCAAAGAAGGAAGGAGCTTCGGTTGGCATTGGCACAGCCGCATAACTTTATCTACAAAGTAACTAAGAACATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000296438.9 ENST00000415155.5 ENST00000445170.5 ENST00000477542.5 |
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| CDS GCA 90 bp | AAATGCGATGTTCTTAGTTACTTTGTAGATAAAGTTATGCGGCTGTaGCAATGCCAACCGAAGCTCCTTCCTTCTTTGATGCAGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: KCDVLSYFVDKVMRL*QCQPKLLPSLMQEK Trigger: TTTTTCCTGCATCAAAGAAGGAAGGAGCTTCGGTTGGCATTGGCACAGCCGCATAACTTTATCTACAAAGTAACTAAGAACATCGCATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000296438.9 ENST00000415155.5 ENST00000445170.5 ENST00000477542.5 |
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| CDS CCA 72 bp | GGCCTCTGGAGAGAAGGGCAGGGACATTCTGGCATGTaGCAGGAGCCACTCTGTGTCATGGGGTTGGATCCC | + |
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Preference number: 6 (lower is better) Translates to: GLWREGQGHSGM*QEPLCVMGLDP Trigger: GGGATCCAACCCCATGACACAGAGTGGCTCCTGCCACATGCCAGAATGTCCCTGCCCTTCTCTCCAGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS CCA 72 bp | AAAGTCTGCAGCACTTGGGATCTTGAATCTGGTGAGTaGGGCTCATCTCTCAGCGCCAGCATGGCCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: KVCSTWDLESGE*GSSLSASMASG Trigger: CCCAGAGGCCATGCTGGCGCTGAGAGATGAGCCCCACTCACCAGATTCAAGATCCCAAGTGCTGCAGACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296438.9 |
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| CDS CCA 72 bp | GTGAAGCTCAGATTTTGGAAACCTGGTCCGGTGTCCTaGGCCACAGGTAAGTGGCTGAAGCTGGTGGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: VKLRFWKPGPVS*ATGKWLKLVVC Trigger: GCAAACCACCAGCTTCAGCCACTTACCTGTGGCCCAGGACACCGGACCAGGTTTCCAAAATCTGAGCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS TCA 72 bp | CAGAGCTGCAGGCTCTGGGAAGCCAATAAGGGATGGTaGAGCACAGCTGTTACCAGTCCTGGGCTCTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: QSCRLWEANKGW*STAVTSPGLCN Trigger: ATTACAGAGCCCAGGACTGGTAACAGCTGTGCTTCACCATCCCTTATTGGCTTCCCAGAGCCTGCAGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS CCA 72 bp | CTTTGTAAGATAGGCTTCCATGCAATAACAGGGCTGTaGCATGGGGAGAACAGCCAGAGCGTCCCTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LCKIGFHAITGL*HGENSQSVPVL Trigger: CAGGACAGGGACGCTCTGGCTGTTCTCCCCATGCCACAGCCCTGTTATTGCATGGAAGCCTATCTTACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000296438.9 ENST00000436231.5 ENST00000445170.5 ENST00000477542.5 |
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| CDS GCA 72 bp | CACATAGCAAGGATCCACCCAGAAGTTGTTGATGGCTaGCTGATGGTCCTCAAATCGTTGCAGCAGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: HIARIHPEVVDG*LMVLKSLQQEA Trigger: GGCTTCCTGCTGCAACGATTTGAGGACCATCAGGCAGCCATCAACAACTTCTGGGTGGATCCTTGCTATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000296438.9 ENST00000415155.5 ENST00000436231.5 ENST00000445170.5 |
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| CDS CCA 72 bp | AACCTCTGGAGGTCTAGGAATGTGAAGCTCAGATTTTaGAAACCTGGTCCGGTGTCCTGGGCCACAGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: NLWRSRNVKLRF*KPGPVSWATGK Trigger: CTTACCTGTGGCCCAGGACACCGGACCAGGTTTCCAAAATCTGAGCTTCACATTCCTAGACCTCCAGAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS CAA 90 bp | ACACTAACTTTCCTGTGTATATCTCACAACACAGCCACACAGGCCTaGGGACACAGCATGGGTGCGCAGTCAGATGATCTCCTCTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: TLTFLCISHNTATQA*GHSMGAQSDDLLSP Trigger: AGGGGAGAGGAGATCATCTGACTGCGCACCCATGCTGTGTCCCAAGGCCTGTGTGGCTGTGTTGTGAGATATACACAGGAAAGTTAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477542.5 |
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| CDS CCA 72 bp | AATCTGGTGAGTGGGGCTCATCTCTCAGCGCCAGCATaGCCTCTGGGTTTCTACCTTCTCGCATTTAACTTT | + |
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Preference number: 6 (lower is better) Translates to: NLVSGAHLSAPA*PLGFYLLAFNF Trigger: AAAGTTAAATGCGAGAAGGTAGAAACCCAGAGGCCATGCTGGCGCTGAGAGATGAGCCCCACTCACCAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296438.9 |
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| CDS CCA 72 bp | AGTTGCTGCAGTCCCATCTCTGCAGAGATAGTGACCTaGAAACAGAGTCACAGTCCCATCAGGCTGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SCCSPISAEIVT*KQSHSPIRLFS Trigger: TGAGAACAGCCTGATGGGACTGTGACTCTGTTTCCAGGTCACTATCTCTGCAGAGATGGGACTGCAGCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477542.5 |
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| CDS TCA 72 bp | CCACATCCACTTTCCTTTCTCCTCTCCGGGCTGCTCTaGATTTATAGGCTTTGCCAAAGTCTGCAGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: PHPLSFLLSGLL*IYRLCQSLQHL Trigger: CAAGTGCTGCAGACTTTGGCAAAGCCTATAAATTCAGAGCAGCCCGGAGAGGAGAAAGGAAAGTGGATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296438.9 ENST00000415155.5 ENST00000477542.5 |
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| CDS TCA 72 bp | ATCATACATACCACCCAGAAGTTGTTGATGGCTGCCTaGTGGTCCTCAAATCGTTGCAGCAGGAAGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: IIHTTQKLLMAA*WSSNRCSRKPV Trigger: CACTGGCTTCCTGCTGCAACGATTTGAGGACCATCAGGCAGCCATCAACAACTTCTGGGTGGTATGTATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468158.1 ENST00000477542.5 |
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| CDS GCA 72 bp | GAGAATCATACATACCACCCAGAAGTTGTTGATGGCTaGCTGATGGTCCTCAAATCGTTGCAGCAGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ENHTYHPEVVDG*LMVLKSLQQEA Trigger: GGCTTCCTGCTGCAACGATTTGAGGACCATCAGGCAGCCATCAACAACTTCTGGGTGGTATGTATGATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468158.1 ENST00000477542.5 |
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| CDS GCA 72 bp | TGGGCCACAGGTAAGTGGCTGAAGCTGGTGGTTTGCTaGCATCTTCTGGCCATAGTGTGGAATTTATCAGAA | + |
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Preference number: 6 (lower is better) Translates to: WATGKWLKLVVC*HLLAIVWNLSE Trigger: TTCTGATAAATTCCACACTATGGCCAGAAGATGGCAGCAAACCACCAGCTTCAGCCACTTACCTGTGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS TCA 72 bp | AGTGGAGGAGAATCATACATACCACCCAGAAGTTGTTaGTGGCTGCCTGATGGTCCTCAAATCGTTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SGGESYIPPRSC*WLPDGPQIVAA Trigger: TGCTGCAACGATTTGAGGACCATCAGGCAGCCATCAACAACTTCTGGGTGGTATGTATGATTCTCCTCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468158.1 ENST00000477542.5 |
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| CDS CAA 90 bp | TGCCAATGCCAACCGAAGCTCCTTCCTTCTTTGATGCAGGAAAAATaGCTTCCATGTGTGTGTGCCCAGGTGTTGATTGGTGAAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: CQCQPKLLPSLMQEK*LPCVCAQVLIGEVA Trigger: AGCAACTTCACCAATCAACACCTGGGCACACACACATGGAAGCAATTTTTCCTGCATCAAAGAAGGAAGGAGCTTCGGTTGGCATTGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000296438.9 ENST00000415155.5 ENST00000445170.5 ENST00000477542.5 |
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| CDS TCA 72 bp | GGCCATAGTGTGGAATTTATCAGAAGCAGCTACCAATaGGGGTGTCTGGAGCTCTATAAATTGCAAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GHSVEFIRSSYQ*GCLELYKLQAW Trigger: CCAGGCTTGCAATTTATAGAGCTCCAGACACCCTCATTGGTAGCTGCTTCTGATAAATTCCACACTATGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS CCA 72 bp | TTTGCCAGTTGTCCAGGTGGCCATGAAGAGAACCTCTaGAGGTCTAGGAATGTGAAGCTCAGATTTTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: FASCPGGHEENL*RSRNVKLRFWK Trigger: TTTCCAAAATCTGAGCTTCACATTCCTAGACCTCCAGAGGTTCTCTTCATGGCCACCTGGACAACTGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS CAA 72 bp | CAACCGAAGCTCCTTCCTTCTTTGATGCAGGAAAAATaGCTTCCATGTGTGTGTGCCCAGGTGTTGATTGGT | + |
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Preference number: 6 (lower is better) Translates to: QPKLLPSLMQEK*LPCVCAQVLIG Trigger: ACCAATCAACACCTGGGCACACACACATGGAAGCAATTTTTCCTGCATCAAAGAAGGAAGGAGCTTCGGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000296438.9 ENST00000415155.5 ENST00000445170.5 ENST00000477542.5 |
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| CDS GCA 72 bp | TCGCCAACCTCTTGCACATCCCAGGCACAAAGCTCTTaGTTTGGAGATACACTACAAATGATTGATTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPTSCTSQAQSS*FGDTLQMIDFS Trigger: GGAGAAATCAATCATTTGTAGTGTATCTCCAAAGCAAGAGCTTTGTGCCTGGGATGTGCAAGAGGTTGGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415155.5 |
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| CDS CCA 72 bp | CCCGGATCTTGTAGATTTCTGATCTCACCACCAATTTaGTGGAGGCCTGTATTTCATCATGTAGCCTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: PGSCRFLISPPI*WRPVFHHVAFG Trigger: TCCAAAGGCTACATGATGAAATACAGGCCTCCACCAAATTGGTGGTGAGATCAGAAATCTACAAGATCCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS CCA 72 bp | TGGAATTTATCAGAAGCAGCTACCAATGAGGGTGTCTaGAGCTCTATAAATTGCAAGCCTGGGCAAGATAGC | + |
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Preference number: 6 (lower is better) Translates to: WNLSEAATNEGV*SSINCKPGQDS Trigger: GCTATCTTGCCCAGGCTTGCAATTTATAGAGCTCCAGACACCCTCATTGGTAGCTGCTTCTGATAAATTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS CCA 72 bp | TATCTGGATGATATGTGCACGTGTAAGGAAACAGAATaGTTTGCCAGTTGTCCAGGTGGCCATGAAGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: YLDDMCTCKETE*FASCPGGHEEN Trigger: GTTCTCTTCATGGCCACCTGGACAACTGGCAAACCATTCTGTTTCCTTACACGTGCACATATCATCCAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS TCA 72 bp | ATTACTTTTCTGAGGGTCCCGGATCTTGTAGATTTCTaGTCTCACCACCAATTTGGTGGAGGCCTGTATTTC | + |
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Preference number: 6 (lower is better) Translates to: ITFLRVPDLVDF*SHHQFGGGLYF Trigger: GAAATACAGGCCTCCACCAAATTGGTGGTGAGATCAGAAATCTACAAGATCCGGGACCCTCAGAAAAGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS GCA 72 bp | AGTTACTTTGTAGATAAAGTTATGCGGCTGTGCCAATaGCAACCGAAGCTCCTTCCTTCTTTGATGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SYFVDKVMRLCQ*QPKLLPSLMQE Trigger: TTCCTGCATCAAAGAAGGAAGGAGCTTCGGTTGGCATTGGCACAGCCGCATAACTTTATCTACAAAGTAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000296438.9 ENST00000415155.5 ENST00000445170.5 ENST00000477542.5 |
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| CDS GCA 72 bp | ATGGTACCCTCTTGCACATCCCAGGCACAAAGCTCTTaGTTTGGAGATACACTACAAATGATTGATTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: MVPSCTSQAQSS*FGDTLQMIDFS Trigger: GGAGAAATCAATCATTTGTAGTGTATCTCCAAAGCAAGAGCTTTGTGCCTGGGATGTGCAAGAGGGTACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296438.9 ENST00000445170.5 ENST00000477542.5 |
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| CDS GCA 72 bp | GTTCTTAGTTACTTTGTAGATAAAGTTATGCGGCTGTaGCAATGCCAACCGAAGCTCCTTCCTTCTTTGATG | + |
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Preference number: 6 (lower is better) Translates to: VLSYFVDKVMRL*QCQPKLLPSLM Trigger: CATCAAAGAAGGAAGGAGCTTCGGTTGGCATTGGCACAGCCGCATAACTTTATCTACAAAGTAACTAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000296438.9 ENST00000415155.5 ENST00000445170.5 ENST00000477542.5 |
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| CDS GCA 72 bp | AGATGCATCTCTTGCACATCCCAGGCACAAAGCTCTTaGTTTGGAGATACACTACAAATGATTGATTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RCISCTSQAQSS*FGDTLQMIDFS Trigger: GGAGAAATCAATCATTTGTAGTGTATCTCCAAAGCAAGAGCTTTGTGCCTGGGATGTGCAAGAGATGCATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436231.5 |
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| CDS CCA 72 bp | GGATCTTGTAGATTTCTGATCTCACCACCAATTTGGTaGAGGCCTGTATTTCATCATGTAGCCTTTGGAATT | + |
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Preference number: 6 (lower is better) Translates to: GSCRFLISPPIW*RPVFHHVAFGI Trigger: AATTCCAAAGGCTACATGATGAAATACAGGCCTCCACCAAATTGGTGGTGAGATCAGAAATCTACAAGATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS CCA 72 bp | GATGTTGGGGTTTTATTGATAAGAGTTTCAGTTATCTaGATGATATGTGCACGTGTAAGGAAACAGAATGGT | + |
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Preference number: 6 (lower is better) Translates to: DVGVLLIRVSVI*MICARVRKQNG Trigger: ACCATTCTGTTTCCTTACACGTGCACATATCATCCAGATAACTGAAACTCTTATCAATAAAACCCCAACATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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| CDS TCA 72 bp | TTGTCAGGAGAGCAGTGTAGAAGTACAATACCATATTaGAATGCAGTAACTTTAGAAACATCTCTTAACCCA | + |
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Preference number: 6 (lower is better) Translates to: LSGEQCRSTIPY*NAVTLETSLNP Trigger: TGGGTTAAGAGATGTTTCTAAAGTTACTGCATTTCAATATGGTATTGTACTTCTACACTGCTCTCCTGACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000296438.9 ENST00000415155.5 ENST00000436231.5 ENST00000445170.5 ENST00000477542.5 |
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| CDS CAA 72 bp | TTAATTTGTATGTGTCATCTTTATCATCCTGGGACCTaGACTGATATAAACCCCAAATGTGACTTTGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: LICMCHLYHPGT*TDINPKCDFGY Trigger: ATAACCAAAGTCACATTTGGGGTTTATATCAGTCAAGGTCCCAGGATGATAAAGATGACACATACAAATTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468158.1 |
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