Pregenerated sensors for FBXO43 (Homo sapiens)
Ensembl gene IDs: ENSG00000156509Ensembl transcript IDs: ENST00000428847.3, ENST00000517806.5, ENST00000520987.1
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAGAGTCAGGGTGGACAATCTGCTTTTCCTCTTCTGTCTCTGACTaGGAGCTTTGTTCCCGAAGGGTGGACAGTCTTCTCGACCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: SESGWTICFSSSVSD*ELCSRRVDSLLDLP Trigger: TGGAAGGTCGAGAAGACTGTCCACCCTTCGGGAACAAAGCTCGCAGTCAGAGACAGAAGAGGAAAAGCAGATTGTCCACCCTGACTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR CCA 90 bp | CTAGCCTGTGCCTGCACAGATCTTAAAGCTGAGCGATTTAAAAGCTaGAGCCGAGTGGCAGCATCCTCGACATTTAATACAGCCCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: LACACTDLKAERFKS*SRVAASSTFNTAPS Trigger: TGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCACTCGGCTCCAGCTTTTAAATCGCTCAGCTTTAAGATCTGTGCAGGCACAGGCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR TCA 90 bp | TTTTTCAGAGTCAGGGTGGACAATCTGCTTTTCCTCTTCTGTCTCTaGCTGCGAGCTTTGTTCCCGAAGGGTGGACAGTCTTCTCGACCT | + |
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Preference number: 1 (lower is better) Translates to: FFRVRVDNLLFLFCL*LRALFPKGGQSSRP Trigger: AGGTCGAGAAGACTGTCCACCCTTCGGGAACAAAGCTCGCAGTCAGAGACAGAAGAGGAAAAGCAGATTGTCCACCCTGACTCTGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR CCA 90 bp | GCTTTTCCTCTTCTGTCTCTGACTGCGAGCTTTGTTCCCGAAGGGTaGACAGTCTTCTCGACCTTCCAAGATGTCTTGTCTTTCTTATGG | + |
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Preference number: 1 (lower is better) Translates to: AFPLLSLTASFVPEG*TVFSTFQDVLSFLW Trigger: CCATAAGAAAGACAAGACATCTTGGAAGGTCGAGAAGACTGTCCACCCTTCGGGAACAAAGCTCGCAGTCAGAGACAGAAGAGGAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR TCA 90 bp | GTGTCCCCAACTTTGGGAGTCCCCTTATGTTTCTGCAGTAGTTCTTaGAAAGAACCCTCCTGGTCAGACAGGGAATCTTCTGATTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: VSPTLGVPLCFCSSS*KEPSWSDRESSDFS Trigger: GGAGAAATCAGAAGATTCCCTGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGAAACATAAGGGGACTCCCAAAGTTGGGGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR CCA 90 bp | GGGTGGACAGTCTTCTCGACCTTCCAAGATGTCTTGTCTTTCTTATaGTGTCCCCAACTTTGGGAGTCCCCTTATGTTTCTGCAGTAGTT | + |
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Preference number: 1 (lower is better) Translates to: GWTVFSTFQDVLSFL*CPQLWESPYVSAVV Trigger: AACTACTGCAGAAACATAAGGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGAAGGTCGAGAAGACTGTCCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR CCA 90 bp | CCTGCACAGATCTTAAAGCTGAGCGATTTAAAAGCTGGAGCCGAGTaGCAGCATCCTCGACATTTAATACAGCCCCCTCAGAATCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: PAQILKLSDLKAGAE*QHPRHLIQPPQNLF Trigger: AAACAGATTCTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCACTCGGCTCCAGCTTTTAAATCGCTCAGCTTTAAGATCTGTGCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR GCA 90 bp | CTGGGCACTTCCTGGGAGAGCATCTTTTCTATTTCTTGGCTTTGCTaGTCCTCTACTACATTCTTCAGACCCATGATAAGCACACAGACA | + |
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Preference number: 1 (lower is better) Translates to: LGTSWESIFSISWLC*SSTTFFRPMISTQT Trigger: TGTCTGTGTGCTTATCATGGGTCTGAAGAATGTAGTAGAGGAGCAGCAAAGCCAAGAAATAGAAAAGATGCTCTCCCAGGAAGTGCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR GCA 90 bp | ACTCTGGGCACTTCCTGGGAGAGCATCTTTTCTATTTCTTGGCTTTaGTGCTCCTCTACTACATTCTTCAGACCCATGATAAGCACACAG | + |
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Preference number: 1 (lower is better) Translates to: TLGTSWESIFSISWL*CSSTTFFRPMISTQ Trigger: CTGTGTGCTTATCATGGGTCTGAAGAATGTAGTAGAGGAGCAGCAAAGCCAAGAAATAGAAAAGATGCTCTCCCAGGAAGTGCCCAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR GCA 90 bp | GACCTTCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGAGTCCCCCATTTCCTGCTTCAGTaGCAGCTTGACCTGAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: DLPRCLVFLMVSPTLGVPHFLLQ*QLDLSA Trigger: GGCACTCAGGTCAAGCTGGCACTGAAGCAGGAAATG...GGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGAAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGAGTCCCCTTATGGTCCGCCCCATTTCCTaGTTCAGTGCCAGCTTGACC | + |
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Preference number: 2 (lower is better) Translates to: SKMSCLSYGVPNFGSPLMVRPIS*FSASLT Trigger: GGTCAAGCTGGCACTGAAGCAGGAAATGGGGCGGAC...CATAAGGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAGCATCCTCGACATTTAATACAGCCCCCTCAGAATCTGTTTTCAGTTGTAGTGCCAGCTTGACCTaGGTGCCTTTGCGACATCTT | + |
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Preference number: 2 (lower is better) Translates to: VAASSTFNTAPSESVFSCSASLT*VPLRHL Trigger: AAGATGTCGCAAAGGCACTCAGGTCAAGCTGGCACT...ACAACTGAAAACAGATTCTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR CAA 90 bp | TTTGTTCCCGAAGGGTGGACAGTCTTCTCGACCTTCCAAGATGTCTaGTCTTTCTTATGGTGTCCCCAACTTTGGGAGTCCCCTTATGTT | + |
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Preference number: 2 (lower is better) Translates to: FVPEGWTVFSTFQDV*SFLWCPQLWESPYV Trigger: AACATAAGGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGAAGGTCGAGAAGACTGTCCACCCTTCGGGAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR TCA 90 bp | GACCTTCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGAGTCCCCTTCTGCAGTAGTTCTTaGAAAGAACCCTCCTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: DLPRCLVFLMVSPTLGVPFCSSS*KEPSWS Trigger: TGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGAA...GGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGAAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGCATCCTCGACATTTAATACAGCCCCCTCAGAATCTGTTTTCAGTTGTCTTGGAGTTGACAATTaGAGGAGAGTCCGCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: VAASSTFNTAPSESVFSCLGVDN*RRVRPI Trigger: AATGGGGCGGACTCTCCTCCAATTGTCAACTCCAAG...ACAACTGAAAACAGATTCTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGAGTCCCCTTATGCAGGCGTTGAAATACTaGCTCTCACTTCAGGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SKMSCLSYGVPNFGSPLMQALKY*LSLQVK Trigger: CTTCACCTGAAGTGAGAGGCAGTATTTCAACGCCTG...CATAAGGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR CAA 90 bp | TACTCTGGGCACTTCCTGGGAGAGCATCTTTTCTATTTCTTGGCTTaGCTGCTCCTCTACTACATTCTTCAGACCCATGATAAGCACACA | + |
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Preference number: 2 (lower is better) Translates to: YSGHFLGEHLFYFLA*LLLYYILQTHDKHT Trigger: TGTGTGCTTATCATGGGTCTGAAGAATGTAGTAGAGGAGCAGCAAAGCCAAGAAATAGAAAAGATGCTCTCCCAGGAAGTGCCCAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR TCA 90 bp | TCAAAACTTCTCCCCAGGGAGATAATGTTGACCCTTGCTCTCTCTGAGAACCAGTGGAACAAAAATCTCTaGAGGTGGAGTACTTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SKLLPREIMLTLALSENQWNKNL*RWSTWS Trigger: ACTCCAAGTACTCCACCTTCAGAGATTTTTGTTCCA...CTGGTTCTCAGAGAGAGCAAGGGTCAACATTATCTCCCTGGGGAGAAGTTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR TCA 90 bp | GAGTCCCCTTATGTTTCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACATGCCCTGGAAAAACCTaGAGCACTGCTTGGAATATT | + |
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Preference number: 2 (lower is better) Translates to: ESPYVSAVVLEKNPPGQTCPGKT*STAWNI Trigger: AATATTCCAAGCAGTGCTTCAGGTTTTTCCAGGGCA...TGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGAAACATAAGGGGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAGCATCCTCGACATTTAATACAGCCCCCTCAGAATCTGTTTTCAGTTGTCAGGAGCTCTGGACATaGATTCTCATCATTAATGCA | + |
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Preference number: 2 (lower is better) Translates to: VAASSTFNTAPSESVFSCQELWT*ILIINA Trigger: TGCATTAATGATGAGAATGCATGTCCAGAGCTCCTG...ACAACTGAAAACAGATTCTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAGCATCCTCGACATTTAATACAGCCCCCTCAGAATCTGTTTTCAGTTGTTTTCTCCAAGCTAAGTaGGTTAAAACCACTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VAASSTFNTAPSESVFSCFLQAK*VKTTVF Trigger: GAAGACAGTGGTTTTAACTCACTTAGCTTGGAGAAA...ACAACTGAAAACAGATTCTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR GCA 90 bp | GTCCAGTTTTTCTATACCCATTTTCTTGCCGATCAGTCCTGCAAGTATACACTGTTCTCCCCATCCCCTTaGTCTAAGAATTCATGTCCA | + |
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Preference number: 2 (lower is better) Translates to: VQFFYTHFLADQSCKYTLFSPSP*SKNSCP Trigger: TGGACATGAATTCTTAGAGCAAGGGGATGGGGAGAA...CAGTGTATACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGAAAAACTGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCGATTTGCATTTTTATCTTGAACAACAATTTCACGCCAATTTCTGCTTATTTGTTCCCGAAGGGTaGACAGTCTTCTCGACCTTC | + |
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Preference number: 2 (lower is better) Translates to: SSDLHFYLEQQFHANFCLFVPEG*TVFSTF Trigger: GAAGGTCGAGAAGACTGTCCACCCTTCGGGAACAAA...TAAGCAGAAATTGGCGTGAAATTGTTGTTCAAGATAAAAATGCAAATCGGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCGATTTGCATTTTTATCTTGAACAACAATTTCACGCCAATTTCTGCTTACTATACCCATTTTCTTaGCGATCAGTCCTGCAAGTA | + |
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Preference number: 2 (lower is better) Translates to: SSDLHFYLEQQFHANFCLLYPFS*RSVLQV Trigger: TACTTGCAGGACTGATCGGCAAGAAAATGGGTATAG...TAAGCAGAAATTGGCGTGAAATTGTTGTTCAAGATAAAAATGCAAATCGGAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR CCA 90 bp | AGTTTTTCTATACCCATTTTCTTGCCGATCAGTCCTGCAAGTATACACTGCAGTTGGAATCATCAATTGTaGAAGTCTTTTGCTGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SFSIPIFLPISPASIHCSWNHQL*KSFAEK Trigger: TTTCTCAGCAAAAGACTTCCACAATTGATGATTCCA...ACTGCAGTGTATACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGAAAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCGATTTGCATTTTTATCTTGAACAACAATTTCACGCCAATTTCTGCTTAGTGGAAGTCTTTTGCTaGGAAAAATTAAGCCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: SSDLHFYLEQQFHANFCLVEVFC*EKLSLN Trigger: ATTGAGGCTTAATTTTTCTCAGCAAAAGACTTCCAC...TAAGCAGAAATTGGCGTGAAATTGTTGTTCAAGATAAAAATGCAAATCGGAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR TCA 72 bp | CTAAAGGTCAAATCCCCACTCTCATCACTACTCAGCTaGCCCTCTGAGATGGCAGAAGCAGCTGCTGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: LKVKSPLSSLLS*PSEMAEAAAAL Trigger: AAGAGCAGCAGCTGCTTCTGCCATCTCAGAGGGTCAGCTGAGTAGTGATGAGAGTGGGGATTTGACCTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR CCA 72 bp | CTTCTGTCTCTGACTGCGAGCTTTGTTCCCGAAGGGTaGACAGTCTTCTCGACCTTCCAAGATGTCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: LLSLTASFVPEG*TVFSTFQDVLS Trigger: AGACAAGACATCTTGGAAGGTCGAGAAGACTGTCCACCCTTCGGGAACAAAGCTCGCAGTCAGAGACAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR TCA 72 bp | GTCCGCCCCATTTCCTGCTTCAGTGCCAGCTTGACCTaGGTGCCTTTGCGACATCTTCAAAATCTCTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: VRPISCFSASLT*VPLRHLQNLCL Trigger: TAAACAGAGATTTTGAAGATGTCGCAAAGGCACTCAGGTCAAGCTGGCACTGAAGCAGGAAATGGGGCGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR CCA 72 bp | ATCTTAAAGCTGAGCGATTTAAAAGCTGGAGCCGAGTaGCAGCATCCTCGACATTTAATACAGCCCCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: ILKLSDLKAGAE*QHPRHLIQPPQ Trigger: CTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCACTCGGCTCCAGCTTTTAAATCGCTCAGCTTTAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR CAA 90 bp | GAGTCCCCTTATGTTTCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACACTGAAGGTGGAGTACTaGGAGTTGACAATTGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: ESPYVSAVVLEKNPPGQTLKVEY*ELTIGG Trigger: TCCTCCAATTGTCAACTCCAAGTACTCCACCTTCAG...TGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGAAACATAAGGGGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR CCA 72 bp | GCCTGCACAGATCTTAAAGCTGAGCGATTTAAAAGCTaGAGCCGAGTGGCAGCATCCTCGACATTTAATACA | + |
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Preference number: 3 (lower is better) Translates to: ACTDLKAERFKS*SRVAASSTFNT Trigger: TGTATTAAATGTCGAGGATGCTGCCACTCGGCTCCAGCTTTTAAATCGCTCAGCTTTAAGATCTGTGCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR CCA 72 bp | GTCTTCTCGACCTTCCAAGATGTCTTGTCTTTCTTATaGTGTCCCCAACTTTGGGAGTCCCCTTATGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: VFSTFQDVLSFL*CPQLWESPYVS Trigger: AGAAACATAAGGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGAAGGTCGAGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR GCA 72 bp | TCCTGGGAGAGCATCTTTTCTATTTCTTGGCTTTGCTaGTCCTCTACTACATTCTTCAGACCCATGATAAGC | + |
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Preference number: 3 (lower is better) Translates to: SWESIFSISWLC*SSTTFFRPMIS Trigger: GCTTATCATGGGTCTGAAGAATGTAGTAGAGGAGCAGCAAAGCCAAGAAATAGAAAAGATGCTCTCCCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR CAA 90 bp | GAGTCCCCTTATGTTTCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACACTTTGGAATCATCAATaGTGGAAGTCTTTTGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: ESPYVSAVVLEKNPPGQTLWNHQ*WKSFAE Trigger: CTCAGCAAAAGACTTCCACAATTGATGATTCCAAAG...TGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGAAACATAAGGGGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR GCA 72 bp | ACTTCCTGGGAGAGCATCTTTTCTATTTCTTGGCTTTaGTGCTCCTCTACTACATTCTTCAGACCCATGATA | + |
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Preference number: 3 (lower is better) Translates to: TSWESIFSISWL*CSSTTFFRPMI Trigger: TATCATGGGTCTGAAGAATGTAGTAGAGGAGCAGCAAAGCCAAGAAATAGAAAAGATGCTCTCCCAGGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR CCA 72 bp | CAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTaGGAGTCCCCTTATGTTTCTGCAGTAGTTCTTGAA | + |
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Preference number: 3 (lower is better) Translates to: QDVLSFLWCPQL*ESPYVSAVVLE Trigger: TTCAAGAACTACTGCAGAAACATAAGGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR GCA 72 bp | CTGTTAAGATGTCCAGTTTTTCTATACCCATTTTCTTaGCGATCAGTCCTGCAAGTATACACTGCAGTACAG | + |
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Preference number: 3 (lower is better) Translates to: LLRCPVFLYPFS*RSVLQVYTAVQ Trigger: CTGTACTGCAGTGTATACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGAAAAACTGGACATCTTAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACAGGGAATCTTCTGATTAGGCTACAATCATCTTaGGAATCATCAATTGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: SAVVLEKNPPGQTGNLLIRLQSS*ESSIVE Trigger: TTCCACAATTGATGATTCCAAAGATGATTGTAGCCT...AATCAGAAGATTCCCTGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR TCA 72 bp | ATACTGCCTCTCACTTCAGGTGAAGGAGAAAGTATTTaGCTTGCGTTAAATCTAATGTTTGCCACAAGATTA | + |
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Preference number: 3 (lower is better) Translates to: ILPLTSGEGESI*LALNLMFATRL Trigger: TAATCTTGTGGCAAACATTAGATTTAACGCAAGTCAAATACTTTCTCCTTCACCTGAAGTGAGAGGCAGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR TCA 72 bp | GCAACCTTAACATATTCTTCCTGTTTACTACTTAAGTaGGTAACAGAAGAGCTTGCTAGAGGTGTCAAAACT | + |
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Preference number: 3 (lower is better) Translates to: ATLTYSSCLLLK*VTEELARGVKT Trigger: AGTTTTGACACCTCTAGCAAGCTCTTCTGTTACTCACTTAAGTAGTAAACAGGAAGAATATGTTAAGGTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CCA 90 bp | TCAAAACTTCTCCCCAGGGAGATAATGTTGACCCTTGCTCTCTCTGAGAACCAGGCAGCAGCCGCTGGATaGGCCGGGGAGAAGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SKLLPREIMLTLALSENQAAAAG*AGEKPR Trigger: CCGAGGCTTCTCCCCGGCCCATCCAGCGGCTGCTGC...CTGGTTCTCAGAGAGAGCAAGGGTCAACATTATCTCCCTGGGGAGAAGTTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CCA 90 bp | TCTTCTCGACCTTCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGCCGGGCAGCAGCCGCTaGATGGGCCGGGGAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SSRPSKMSCLSYGVPNFGPGSSR*MGRGEA Trigger: GGCTTCTCCCCGGCCCATCCAGCGGCTGCTGCCCGG...CCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGAAGGTCGAGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR TCA 90 bp | GATTCAAAGTCCCCTTTTAGAAGAGCGAAAGATACATTCAACCTTCTGCGAGGTCCAGGAGCGGAGGAGTaGGGGCTGCCGCGCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: DSKSPFRRAKDTFNLLRGPGAEE*GLPRAS Trigger: GGAGGCGCGCGGCAGCCCTCACTCCTCCGCTCCTGG...ACCTCGCAGAAGGTTGAATGTATCTTTCGCTCTTCTAAAAGGGGACTTTGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR TCA 90 bp | GACCTTCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGAGTCCCCGCTGCAGCCTGGCACTaGCTCCCCCGAGGAGCTATG | + |
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Preference number: 4 (lower is better) Translates to: DLPRCLVFLMVSPTLGVPAAAWH*LPRGAM Trigger: CATAGCTCCTCGGGGGAGTCAGTGCCAGGCTGCAGC...GGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGAAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CCA 90 bp | TCAAAACTTCTCCCCAGGGAGATAATGTTGACCCTTGCTCTCTCTGAGAACCAGGCCGAAGCGGACAGGTaGGAGAGGAGCCGGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SKLLPREIMLTLALSENQAEADR*ERSRAA Trigger: TGCTGCCCGGCTCCTCTCCCACCTGTCCGCTTCGGC...CTGGTTCTCAGAGAGAGCAAGGGTCAACATTATCTCCCTGGGGAGAAGTTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CCA 90 bp | GAGTCCCCTTATGTTTCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACACTCGGCCTCGCCCCCTaGGATGCGGGCTATGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: ESPYVSAVVLEKNPPGQTLGLAP*DAGYGN Trigger: GTTGCCATAGCCCGCATCCCAGGGGGCGAGGCCGAG...TGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGAAACATAAGGGGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CCA 90 bp | TCTTCTCGACCTTCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGCCTAGGCCCAGCACCTaGAAGACACAGGGCGACGCG | + |
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Preference number: 4 (lower is better) Translates to: SSRPSKMSCLSYGVPNFGPRPST*KTQGDA Trigger: CGCGTCGCCCTGTGTCTTCCAGGTGCTGGGCCTAGG...CCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGAAGGTCGAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR TCA 90 bp | TCTGTTCCACAAGTTGTTCCACTAACAGAGGAGCCCAGGAGCTCTGGACATGCACCAAATTCGGGTTCCTaGAAAGGCAGCGTGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVPQVVPLTEEPRSSGHAPNSGS*KGSVCC Trigger: GCAGCACACGCTGCCTTTTCAGGAACCCGAATTTGG...TGCATGTCCAGAGCTCCTGGGCTCCTCTGTTAGTGGAACAACTTGTGGAACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | TCCTCATCTGTTCCACAAGTTGTTCCACTAACAGAGGAGCCCAGGAGCTCTGGATTCCTCTTCTGTCTCTaGCTGCGAGCTTTGTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSSVPQVVPLTEEPRSSGFLFCL*LRALFP Trigger: CGGGAACAAAGCTCGCAGTCAGAGACAGAAGAGGAA...TCCAGAGCTCCTGGGCTCCTCTGTTAGTGGAACAACTTGTGGAACAGATGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGCATCCTCGACATTTAATACAGCCCCCTCAGAATCTGTTTTCAGTTGTAAAGGCAGCGTGTGCTaGAGCCTGGCACTGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VAASSTFNTAPSESVFSCKGSVC*SLALTP Trigger: GGGAGTCAGTGCCAGGCTGCAGCACACGCTGCCTTT...ACAACTGAAAACAGATTCTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACAGGGAATCTTCTGATTCTGGGATGCGGGCTATaGCAACCCCCACGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SAVVLEKNPPGQTGNLLILGCGL*QPPRQL Trigger: AAGCTGGCGTGGGGGTTGCCATAGCCCGCATCCCAG...AATCAGAAGATTCCCTGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | GATTCAAAGTCCCCTTTTAGAAGAGCGAAAGATACATTCAACCTTCTGCGAGGTGCTATGGCGGGCGGGTaGGTAACGGTCTCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSKSPFRRAKDTFNLLRGAMAGG*VTVSPG Trigger: CCCTGGTGAGACCGTTACCCACCCGCCCGCCATAGC...ACCTCGCAGAAGGTTGAATGTATCTTTCGCTCTTCTAAAAGGGGACTTTGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGCATCCTCGACATTTAATACAGCCCCCTCAGAATCTGTTTTCAGTTGTACTCAGCTGACCCTCTaGGATGGCAGAAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VAASSTFNTAPSESVFSCTQLTL*DGRSSC Trigger: GCAGCTGCTTCTGCCATCTCAGAGGGTCAGCTGAGT...ACAACTGAAAACAGATTCTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCAGTGCCAGCTTGACCTGAGTGCCTTTGCGACATCTTCAAAATCTCTGGAAGGGTACACAGGGTaGATGCCGCAGGGATTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLQCQLDLSAFATSSKSLEGYTG*MPQGLF Trigger: GAATAATCCCTGCGGCATGCACCCTGTGTACCCTTC...CAGAGATTTTGAAGATGTCGCAAAGGCACTCAGGTCAAGCTGGCACTGAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGCATCCTCGACATTTAATACAGCCCCCTCAGAATCTGTTTTCAGTTGTGTCCGCCCCATTTCCTaGTTCAGTGCCAGCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VAASSTFNTAPSESVFSCVRPIS*FSASLT Trigger: GGTCAAGCTGGCACTGAAGCAGGAAATGGGGCGGAC...ACAACTGAAAACAGATTCTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCATCTGTTCCACAAGTTGTTCCACTAACAGAGGAGCCCAGGAGCTCTGGAGGAGCCCAGGAGCTCTaGACATGCATTCTCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSSVPQVVPLTEEPRSSGGAQEL*TCILII Trigger: AATGATGAGAATGCATGTCCAGAGCTCCTGGGCTCC...TCCAGAGCTCCTGGGCTCCTCTGTTAGTGGAACAACTTGTGGAACAGATGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | TCCTCATCTGTTCCACAAGTTGTTCCACTAACAGAGGAGCCCAGGAGCTCTGGACAGGCGTTGAAATACTaGCTCTCACTTCAGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSVPQVVPLTEEPRSSGQALKY*LSLQVK Trigger: CTTCACCTGAAGTGAGAGGCAGTATTTCAACGCCTG...TCCAGAGCTCCTGGGCTCCTCTGTTAGTGGAACAACTTGTGGAACAGATGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCAGTGCCAGCTTGACCTGAGTGCCTTTGCGACATCTTCAAAATCTCTGTACTTAGCAGGGGACTaGCACCTTGGGCAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLQCQLDLSAFATSSKSLYLAGD*HLGQGF Trigger: AAAACCTTGCCCAAGGTGCCAGTCCCCTGCTAAGTA...CAGAGATTTTGAAGATGTCGCAAAGGCACTCAGGTCAAGCTGGCACTGAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| 3UTR CAA 72 bp | GAAGGGTGGACAGTCTTCTCGACCTTCCAAGATGTCTaGTCTTTCTTATGGTGTCCCCAACTTTGGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGWTVFSTFQDV*SFLWCPQLWES Trigger: GGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGAAGGTCGAGAAGACTGTCCACCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | TCTGTTCCACAAGTTGTTCCACTAACAGAGGAGCCCAGGAGCTCTGGACATGCATTCTGCAGTAGTTCTTaGAAAGAACCCTCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVPQVVPLTEEPRSSGHAFCSSS*KEPSWS Trigger: TGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGAA...TGCATGTCCAGAGCTCCTGGGCTCCTCTGTTAGTGGAACAACTTGTGGAACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | TCTGTTCCACAAGTTGTTCCACTAACAGAGGAGCCCAGGAGCTCTGGACATGCACAGCAGCATCATGATTaGTCAAAGTCGAAGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SVPQVVPLTEEPRSSGHAQQHHD*SKSKGT Trigger: TGTACCCTTCGACTTTGAGCAATCATGATGCTGCTG...TGCATGTCCAGAGCTCCTGGGCTCCTCTGTTAGTGGAACAACTTGTGGAACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGCATCCTCGACATTTAATACAGCCCCCTCAGAATCTGTTTTCAGTTGTCATTTCCTGCTTCAGTaGCAGCTTGACCTGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VAASSTFNTAPSESVFSCHFLLQ*QLDLSA Trigger: GGCACTCAGGTCAAGCTGGCACTGAAGCAGGAAATG...ACAACTGAAAACAGATTCTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCCGATTTGCATTTTTATCTTGAACAACAATTTCACGCCAATTTCTGCTTACAGCAGGGGATGGGCTaGCGTCACCAGGAGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSDLHFYLEQQFHANFCLQQGMG*RHQERR Trigger: CCTCCGCTCCTGGTGACGCCAGCCCATCCCCTGCTG...TAAGCAGAAATTGGCGTGAAATTGTTGTTCAAGATAAAAATGCAAATCGGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| 3UTR CAA 72 bp | GTGGAACAAAAATCTCTGAAGGTGGAGTACTTGGAGTaGACAATTGGAGGAGAGTCCGCCCCATTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VEQKSLKVEYLE*TIGGESAPFPA Trigger: AGCAGGAAATGGGGCGGACTCTCCTCCAATTGTCAACTCCAAGTACTCCACCTTCAGAGATTTTTGTTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | GACCTTCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGAGTCCCCGCCTCTCACTTCAGGTaGAGGAGAAAGTATTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: DLPRCLVFLMVSPTLGVPASHFR*RRKYLT Trigger: AGTCAAATACTTTCTCCTTCACCTGAAGTGAGAGGC...GGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGAAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | GAGTCCCCTTATGTTTCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACATTTGTTCCCGAAGGGTaGACAGTCTTCTCGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESPYVSAVVLEKNPPGQTFVPEG*TVFSTF Trigger: GAAGGTCGAGAAGACTGTCCACCCTTCGGGAACAAA...TGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGAAACATAAGGGGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGCATCCTCGACATTTAATACAGCCCCCTCAGAATCTGTTTTCAGTTGTAAAGCTGGAGCCGAGTaGCAGCATCCTCGACATTTA | + |
|
Preference number: 4 (lower is better) Translates to: VAASSTFNTAPSESVFSCKAGAE*QHPRHL Trigger: TAAATGTCGAGGATGCTGCCACTCGGCTCCAGCTTT...ACAACTGAAAACAGATTCTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCAGTGCCAGCTTGACCTGAGTGCCTTTGCGACATCTTCAAAATCTCTGACTCTGGGCACTTCCTaGGAGAGCATCTTTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: LLQCQLDLSAFATSSKSLTLGTS*ESIFSI Trigger: AATAGAAAAGATGCTCTCCCAGGAAGTGCCCAGAGT...CAGAGATTTTGAAGATGTCGCAAAGGCACTCAGGTCAAGCTGGCACTGAAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | GATTCAAAGTCCCCTTTTAGAAGAGCGAAAGATACATTCAACCTTCTGCGAGGTGGTGCAGCAGCATCATaGTTGCTCAAAGTCGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSKSPFRRAKDTFNLLRGGAAAS*LLKVEG Trigger: CCCTTCGACTTTGAGCAATCATGATGCTGCTGCACC...ACCTCGCAGAAGGTTGAATGTATCTTTCGCTCTTCTAAAAGGGGACTTTGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | TCAAAACTTCTCCCCAGGGAGATAATGTTGACCCTTGCTCTCTCTGAGAACCAGTGCCCTGGAAAAACCTaGAGCACTGCTTGGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: SKLLPREIMLTLALSENQCPGKT*STAWNI Trigger: AATATTCCAAGCAGTGCTTCAGGTTTTTCCAGGGCA...CTGGTTCTCAGAGAGAGCAAGGGTCAACATTATCTCCCTGGGGAGAAGTTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | TCAAAACTTCTCCCCAGGGAGATAATGTTGACCCTTGCTCTCTCTGAGAACCAGTCAGGGTGGACAATCTaGTTTTCCTCTTCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKLLPREIMLTLALSENQSGWTI*FSSSVS Trigger: AGAGACAGAAGAGGAAAAGCAGATTGTCCACCCTGA...CTGGTTCTCAGAGAGAGCAAGGGTCAACATTATCTCCCTGGGGAGAAGTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGCATCCTCGACATTTAATACAGCCCCCTCAGAATCTGTTTTCAGTTGTCTTGCCGATCAGTCCTaGAAGTATACACTGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VAASSTFNTAPSESVFSCLADQS*KYTLQY Trigger: GTACTGCAGTGTATACTTGCAGGACTGATCGGCAAG...ACAACTGAAAACAGATTCTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | AGTTTTTCTATACCCATTTTCTTGCCGATCAGTCCTGCAAGTATACACTGCAGTAGTGCCAGCTTGACCTaGGTGCCTTTGCGACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFSIPIFLPISPASIHCSSASLT*VPLRHL Trigger: AAGATGTCGCAAAGGCACTCAGGTCAAGCTGGCACT...ACTGCAGTGTATACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGAAAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCAGTGCCAGCTTGACCTGAGTGCCTTTGCGACATCTTCAAAATCTCTGTTTCACGCCAATTTCTaGTTACTTTCCAAACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLQCQLDLSAFATSSKSLFHANF*LLSKHC Trigger: GCAGTGTTTGGAAAGTAAGCAGAAATTGGCGTGAAA...CAGAGATTTTGAAGATGTCGCAAAGGCACTCAGGTCAAGCTGGCACTGAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTTTTTCTATACCCATTTTCTTGCCGATCAGTCCTGCAAGTATACACTGCTTGGAGTTGACAATTaGAGGAGAGTCCGCCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VQFFYTHFLADQSCKYTLLGVDN*RRVRPI Trigger: AATGGGGCGGACTCTCCTCCAATTGTCAACTCCAAG...CAGTGTATACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGAAAAACTGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGCATCCTCGACATTTAATACAGCCCCCTCAGAATCTGTTTTCAGTTGTGTCTTGTCTTTCTTATaGTGTCCCCAACTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAASSTFNTAPSESVFSCVLSFL*CPQLWE Trigger: CTCCCAAAGTTGGGGACACCATAAGAAAGACAAGAC...ACAACTGAAAACAGATTCTGAGGGGGCTGTATTAAATGTCGAGGATGCTGCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | AGTTTTTCTATACCCATTTTCTTGCCGATCAGTCCTGCAAGTATACACTGCAGTGAGCGATTTAAAAGCTaGAGCCGAGTGGCAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SFSIPIFLPISPASIHCSERFKS*SRVAAS Trigger: GGATGCTGCCACTCGGCTCCAGCTTTTAAATCGCTC...ACTGCAGTGTATACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGAAAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTTTTTCTATACCCATTTTCTTGCCGATCAGTCCTGCAAGTATACACTGAAATTCCGCTTACTCTaGGCACTTCCTGGGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQFFYTHFLADQSCKYTLKFRLL*ALPGRA Trigger: TGCTCTCCCAGGAAGTGCCCAGAGTAAGCGGAATTT...CAGTGTATACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGAAAAACTGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| 3UTR CAA 72 bp | GAAGATGTGGAACAAAAATCTCTGAAGGTGGAGTACTaGGAGTTGACAATTGGAGGAGAGTCCGCCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EDVEQKSLKVEY*ELTIGGESAPF Trigger: AAATGGGGCGGACTCTCCTCCAATTGTCAACTCCAAGTACTCCACCTTCAGAGATTTTTGTTCCACATCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | TCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGAGTCCCCTTATGTGGAACAAAAATCTCTaGAGGTGGAGTACTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKMSCLSYGVPNFGSPLMWNKNL*RWSTWS Trigger: ACTCCAAGTACTCCACCTTCAGAGATTTTTGTTCCA...CATAAGGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | AGTTTTTCTATACCCATTTTCTTGCCGATCAGTCCTGCAAGTATACACTGCAGTTCATCACTACTCAGCTaGCCCTCTGAGATGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFSIPIFLPISPASIHCSSSLLS*PSEMAE Trigger: TTCTGCCATCTCAGAGGGTCAGCTGAGTAGTGATGA...ACTGCAGTGTATACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGAAAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | GACCTTCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGAGTCCCCTGTTTACTACTTAAGTaGGTAACAGAAGAGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLPRCLVFLMVSPTLGVPCLLLK*VTEELA Trigger: AGCAAGCTCTTCTGTTACTCACTTAAGTAGTAAACA...GGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGAAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | TCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGAGTCCCCTTATGCCTGCAAGTATACACTaGAGTACAGCTATTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKMSCLSYGVPNFGSPLMPASIH*STAIFS Trigger: GGAGAAAATAGCTGTACTGCAGTGTATACTTGCAGG...CATAAGGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | GAGTCCCCTTATGTTTCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACACTATACCCATTTTCTTaGCGATCAGTCCTGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ESPYVSAVVLEKNPPGQTLYPFS*RSVLQV Trigger: TACTTGCAGGACTGATCGGCAAGAAAATGGGTATAG...TGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGAAACATAAGGGGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| 3UTR CAA 72 bp | CACTTCCTGGGAGAGCATCTTTTCTATTTCTTGGCTTaGCTGCTCCTCTACTACATTCTTCAGACCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: HFLGEHLFYFLA*LLLYYILQTHD Trigger: ATCATGGGTCTGAAGAATGTAGTAGAGGAGCAGCAAAGCCAAGAAATAGAAAAGATGCTCTCCCAGGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | GAGTCCCCTTATGTTTCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACAGTTTGCACAATTAATTaGAAGGTGCAGCAGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: ESPYVSAVVLEKNPPGQTVCTIN*KVQQHH Trigger: ATGATGCTGCTGCACCTTTCAATTAATTGTGCAAAC...TGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGAAACATAAGGGGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | TCAAAACTTCTCCCCAGGGAGATAATGTTGACCCTTGCTCTCTCTGAGAACCAGGTGGAAGTCTTTTGCTaGGAAAAATTAAGCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKLLPREIMLTLALSENQVEVFC*EKLSLN Trigger: ATTGAGGCTTAATTTTTCTCAGCAAAAGACTTCCAC...CTGGTTCTCAGAGAGAGCAAGGGTCAACATTATCTCCCTGGGGAGAAGTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | TCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACAGGGAATCTTCTGATTTTTCTCCAAGCTAAGTaGGTTAAAACCACTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAVVLEKNPPGQTGNLLIFLQAK*VKTTVF Trigger: GAAGACAGTGGTTTTAACTCACTTAGCTTGGAGAAA...AATCAGAAGATTCCCTGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCGACCTTCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGCTGTTTTCAGTTGTGTaGTATAAAATTTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSRPSKMSCLSYGVPNFGLFSVV*YKISSS Trigger: GGAGGAGGAAATTTTATATCACACAACTGAAAACAG...CCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGAAGGTCGAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | TCCAAGATGTCTTGTCTTTCTTATGGTGTCCCCAACTTTGGGAGTCCCCTTATGCAATTAATTGAAAGGTaGAGCAGCATCATGATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKMSCLSYGVPNFGSPLMQLIER*SSIMIA Trigger: AGCAATCATGATGCTGCTGCACCTTTCAATTAATTG...CATAAGGGGACTCCCAAAGTTGGGGACACCATAAGAAAGACAAGACATCTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | GATTCAAAGTCCCCTTTTAGAAGAGCGAAAGATACATTCAACCTTCTGCGAGGTCAGGAGCTCTGGACATaGATTCTCATCATTAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSKSPFRRAKDTFNLLRGQELWT*ILIINA Trigger: TGCATTAATGATGAGAATGCATGTCCAGAGCTCCTG...ACCTCGCAGAAGGTTGAATGTATCTTTCGCTCTTCTAAAAGGGGACTTTGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR GCA 90 bp | AGTTTTTCTATACCCATTTTCTTGCCGATCAGTCCTGCAAGTATACACTGCAGTTTCTCCCCATCCCCTTaGTCTAAGAATTCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFSIPIFLPISPASIHCSFSPSP*SKNSCP Trigger: TGGACATGAATTCTTAGAGCAAGGGGATGGGGAGAA...ACTGCAGTGTATACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGAAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR CCA 90 bp | GAGTCCCCTTATGTTTCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACATGGAATCATCAATTGTaGAAGTCTTTTGCTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ESPYVSAVVLEKNPPGQTWNHQL*KSFAEK Trigger: TTTCTCAGCAAAAGACTTCCACAATTGATGATTCCA...TGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGAAACATAAGGGGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517806.5 |
||
| CDS-3UTR TCA 90 bp | TTGCCACAAGATTACTTATCGGAGTCACAAATATGTCCTCATCTGTTCCACAAGTCCTCTTGCTTTTCATaGACAGCTCATGTACCAATT | + |
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Preference number: 4 (lower is better) Translates to: LPQDYLSESQICPHLFHKSSCFS*TAHVPI Trigger: AATTGGTACATGAGCTGTTCATGAAAAGCAAGAGGA...CTTGTGGAACAGATGAGGACATATTTGTGACTCCGATAAGTAATCTTGTGGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR GCA 90 bp | TCCTCCGATTTGCATTTTTATCTTGAACAACAATTTCACGCCAATTTCTGCTTAATCCTAGCCTGTGCCTaGACAGATCTTAAAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SSDLHFYLEQQFHANFCLILACA*TDLKAE Trigger: CTCAGCTTTAAGATCTGTGCAGGCACAGGCTAGGAT...TAAGCAGAAATTGGCGTGAAATTGTTGTTCAAGATAAAAATGCAAATCGGAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR GCA 90 bp | AGTTTTTCTATACCCATTTTCTTGCCGATCAGTCCTGCAAGTATACACTGCAGTTCTATTTCTTGGCTTTaGTGCTCCTCTACTACATTC | + |
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Preference number: 4 (lower is better) Translates to: SFSIPIFLPISPASIHCSSISWL*CSSTTF Trigger: GAATGTAGTAGAGGAGCAGCAAAGCCAAGAAATAGA...ACTGCAGTGTATACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGAAAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CCA 90 bp | TCCTCCGATTTGCATTTTTATCTTGAACAACAATTTCACGCCAATTTCTGCTTATGGTGTCCCCAACTTTaGGAGTCCCCTTATGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SSDLHFYLEQQFHANFCLWCPQL*ESPYVS Trigger: AGAAACATAAGGGGACTCCCAAAGTTGGGGACACCA...TAAGCAGAAATTGGCGTGAAATTGTTGTTCAAGATAAAAATGCAAATCGGAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| 3UTR CAA 72 bp | TCTGTTAAGATGTCCAGTTTTTCTATACCCATTTTCTaGCCGATCAGTCCTGCAAGTATACACTGCAGTACA | + |
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Preference number: 4 (lower is better) Translates to: SVKMSSFSIPIF*PISPASIHCST Trigger: TGTACTGCAGTGTATACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGAAAAACTGGACATCTTAACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR GCA 90 bp | TCCTCCGATTTGCATTTTTATCTTGAACAACAATTTCACGCCAATTTCTGCTTAATTTCTTGGCTTTGCTaGTCCTCTACTACATTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SSDLHFYLEQQFHANFCLISWLC*SSTTFF Trigger: GAAGAATGTAGTAGAGGAGCAGCAAAGCCAAGAAAT...TAAGCAGAAATTGGCGTGAAATTGTTGTTCAAGATAAAAATGCAAATCGGAGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS CCA 90 bp | AGCGGAGGAGTGAGGGCTGCCGCGCGCCTCCCTAGGCCCAGCACCTaGAAGACACAGGGCGACGCGGGGCCGGGCCGCCGGGAGACCCGC | + |
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Preference number: 5 (lower is better) Translates to: SGGVRAAARLPRPST*KTQGDAGPGRRETR Trigger: GCGGGTCTCCCGGCGGCCCGGCCCCGCGTCGCCCTGTGTCTTCCAGGTGCTGGGCCTAGGGAGGCGCGCGGCAGCCCTCACTCCTCCGCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000428847.3 ENST00000517806.5 |
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| CDS TCA 90 bp | CCAAGGGCAGCAGGGGATGGGCTGGCGTCACCAGGAGCGGAGGAGTaGGGGCTGCCGCGCGCCTCCCTAGGCCCAGCACCTGGAAGACAC | + |
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Preference number: 5 (lower is better) Translates to: PRAAGDGLASPGAEE*GLPRASLGPAPGRH Trigger: GTGTCTTCCAGGTGCTGGGCCTAGGGAGGCGCGCGGCAGCCCTCACTCCTCCGCTCCTGGTGACGCCAGCCCATCCCCTGCTGCCCTTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000428847.3 ENST00000517806.5 |
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| CDS TCA 90 bp | CAAATTCGGGTTCCTGAAAAGGCAGCGTGTGCTGCAGCCTGGCACTaGCTCCCCCGAGGAGCTATGGCGGGCGGGTGGGTAACGGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: QIRVPEKAACAAAWH*LPRGAMAGGWVTVS Trigger: TGAGACCGTTACCCACCCGCCCGCCATAGCTCCTCGGGGGAGTCAGTGCCAGGCTGCAGCACACGCTGCCTTTTCAGGAACCCGAATTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000428847.3 ENST00000517806.5 |
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| CDS-3UTR CAA 90 bp | TCTGTTCCACAAGTTGTTCCACTAACAGAGGAGCCCAGGAGCTCTGGACATGCAACCTTCCAAGATGTCTaGTCTTTCTTATGGTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SVPQVVPLTEEPRSSGHATFQDV*SFLWCP Trigger: GGGACACCATAAGAAAGACAAGACATCTTGGAAGGT...TGCATGTCCAGAGCTCCTGGGCTCCTCTGTTAGTGGAACAACTTGTGGAACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CAA 90 bp | GAGTCCCCTTATGTTTCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACAATGGTGTCCCCAACTTaGGGAGTCCCCTTATGTTTC | + |
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Preference number: 5 (lower is better) Translates to: ESPYVSAVVLEKNPPGQTMVSPT*GVPLCF Trigger: GAAACATAAGGGGACTCCCAAAGTTGGGGACACCAT...TGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGAAACATAAGGGGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CAA 90 bp | TCTGTTCCACAAGTTGTTCCACTAACAGAGGAGCCCAGGAGCTCTGGACATGCACTTTGGAATCATCAATaGTGGAAGTCTTTTGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SVPQVVPLTEEPRSSGHALWNHQ*WKSFAE Trigger: CTCAGCAAAAGACTTCCACAATTGATGATTCCAAAG...TGCATGTCCAGAGCTCCTGGGCTCCTCTGTTAGTGGAACAACTTGTGGAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CAA 90 bp | GTCCAGTTTTTCTATACCCATTTTCTTGCCGATCAGTCCTGCAAGTATACACTGCCCAGGGAGATAATGTaGACCCTTGCTCTCTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: VQFFYTHFLADQSCKYTLPREIM*TLALSE Trigger: CTCAGAGAGAGCAAGGGTCAACATTATCTCCCTGGG...CAGTGTATACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGAAAAACTGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CAA 90 bp | GATTCAAAGTCCCCTTTTAGAAGAGCGAAAGATACATTCAACCTTCTGCGAGGTCAGGGGACTGGCACCTaGGGCAAGGTTTTAATGCTT | + |
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Preference number: 5 (lower is better) Translates to: DSKSPFRRAKDTFNLLRGQGTGT*GKVLML Trigger: AAGCATTAAAACCTTGCCCAAGGTGCCAGTCCCCTG...ACCTCGCAGAAGGTTGAATGTATCTTTCGCTCTTCTAAAAGGGGACTTTGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS TCA 90 bp | CGAAGGGTACACAGGGTGCATGCCGCAGGGATTATTCCTAACACTTaGGAAGGTCTAAATCATTTTGAATTTCCTTCAGCCCTCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: RRVHRVHAAGIIPNT*EGLNHFEFPSALQK Trigger: TTTCTGGAGGGCTGAAGGAAATTCAAAATGATTTAGACCTTCTCAAGTGTTAGGAATAATCCCTGCGGCATGCACCCTGTGTACCCTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000428847.3 ENST00000517806.5 ENST00000520987.1 |
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| CDS-3UTR CAA 90 bp | TCTGCAGTAGTTCTTGAAAAGAACCCTCCTGGTCAGACAGGGAATCTTCTGATTCTGAAGGTGGAGTACTaGGAGTTGACAATTGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: SAVVLEKNPPGQTGNLLILKVEY*ELTIGG Trigger: TCCTCCAATTGTCAACTCCAAGTACTCCACCTTCAG...AATCAGAAGATTCCCTGTCTGACCAGGAGGGTTCTTTTCAAGAACTACTGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CAA 90 bp | TCTGTTCCACAAGTTGTTCCACTAACAGAGGAGCCCAGGAGCTCTGGACATGCAAGGCTACAATCATCTTaGGAATCATCAATTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: SVPQVVPLTEEPRSSGHARLQSS*ESSIVE Trigger: TTCCACAATTGATGATTCCAAAGATGATTGTAGCCT...TGCATGTCCAGAGCTCCTGGGCTCCTCTGTTAGTGGAACAACTTGTGGAACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CAA 90 bp | TCAAAACTTCTCCCCAGGGAGATAATGTTGACCCTTGCTCTCTCTGAGAACCAGGTTATCTTAATATCCTaGTTTTCTCCAGCTGGACTT | + |
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Preference number: 5 (lower is better) Translates to: SKLLPREIMLTLALSENQVILIS*FSPAGL Trigger: AAGTCCAGCTGGAGAAAACAAGGATATTAAGATAAC...CTGGTTCTCAGAGAGAGCAAGGGTCAACATTATCTCCCTGGGGAGAAGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS-3UTR CAA 90 bp | TCCTCCGATTTGCATTTTTATCTTGAACAACAATTTCACGCCAATTTCTGCTTATCTATACCCATTTTCTaGCCGATCAGTCCTGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: SSDLHFYLEQQFHANFCLSIPIF*PISPAS Trigger: ACTTGCAGGACTGATCGGCAAGAAAATGGGTATAGA...TAAGCAGAAATTGGCGTGAAATTGTTGTTCAAGATAAAAATGCAAATCGGAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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| CDS CCA 72 bp | GACAGGTGGGAGAGGAGCCGGGCAGCAGCCGCTGGATaGGCCGGGGAGAAGCCTCGGCCTCGCCCCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: DRWERSRAAAAG*AGEKPRPRPLG Trigger: TCCCAGGGGGCGAGGCCGAGGCTTCTCCCCGGCCCATCCAGCGGCTGCTGCCCGGCTCCTCTCCCACCTGTC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000428847.3 ENST00000517806.5 |
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| CDS CCA 72 bp | CTAGGCCCAGAAAGCCAAGGGCAGCAGGGGATGGGCTaGCGTCACCAGGAGCGGAGGAGTGAGGGCTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LGPESQGQQGMG*RHQERRSEGCR Trigger: GCGGCAGCCCTCACTCCTCCGCTCCTGGTGACGCCAGCCCATCCCCTGCTGCCCTTGGCTTTCTGGGCCTAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000428847.3 ENST00000517806.5 |
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| CDS TCA 72 bp | GTCCGCCCCATTTCCTGCTTCAGTGCCAGCTTGACCTaGGTGCCTTTGCGACATCTTCAAAATCTCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VRPISCFSASLT*VPLRHLQNLCF Trigger: GAAACAGAGATTTTGAAGATGTCGCAAAGGCACTCAGGTCAAGCTGGCACTGAAGCAGGAAATGGGGCGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000428847.3 ENST00000520987.1 |
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| CDS TCA 72 bp | TTTGTTAAAGTGGAAACTCTTACCATCAGTAAATCTTaGGCTCTTAGATGTCAAAGTTACGTAGGCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: FVKVETLTISKS*ALRCQSYVGFQ Trigger: TTGGAAGCCTACGTAACTTTGACATCTAAGAGCTCAAGATTTACTGATGGTAAGAGTTTCCACTTTAACAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517806.5 |
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