RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO32 (Homo sapiens)

Ensembl gene IDs: ENSG00000156804

Ensembl transcript IDs: ENST00000287396.2, ENST00000443022.2, ENST00000517956.5, ENST00000520511.1, ENST00000521719.5, ENST00000524000.5

Found 374 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGCTGACAGTCCACAGCAGGCAATGTTTCTGCGACTGCAAACCTaGAGGCGACGAGGAGTTTCTACTTTCTTGATCAGCATGAAGGGG +
Preference number: 1 (lower is better)
Translates to: CADSPQQAMFLRLQT*RRRGVSTFLISMKG
Trigger: CCCCTTCATGCTGATCAAGAAAGTAGAAACTCCTCGTCGCCTTCAGGTTTGCAGTCGCAGAAACATTGCCTGCTGTGGACTGTCAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 90 bp CGTAACCCTTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATaGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGT +
Preference number: 1 (lower is better)
Translates to: RNPSLGAEVILHRCT*LPGVYRTIMCTADS
Trigger: ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAAGGGTTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 90 bp TGCACTGCTGACAGTCTAAATGACACCAGTGTCCCAGTTTTGTGCTaGCAGTCCACAGCAGGCAATGTTTCTGCGACTGCAAACCTGAAG +
Preference number: 1 (lower is better)
Translates to: CTADSLNDTSVPVLC*QSTAGNVSATANLK
Trigger: CTTCAGGTTTGCAGTCGCAGAAACATTGCCTGCTGTGGACTGTCAGCACAAAACTGGGACACTGGTGTCATTTAGACTGTCAGCAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR GCA 90 bp TTAGACCGTAACCCTTCTCTTGGGGCAGAGGTCATCTTGCACAGATaGACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCT +
Preference number: 1 (lower is better)
Translates to: LDRNPSLGAEVILHR*TWLPGVYRTIMCTA
Trigger: AGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAAGGGTTACGGTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 90 bp TGGTATCTCTGTAGGGTAAGGCTCTGTGCCCATGCAGGTTTAGGATaGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGATCAAA +
Preference number: 1 (lower is better)
Translates to: WYLCRVRLCAHAGLG*VALPSPSQNKHQIK
Trigger: TTTGATCTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATGGGCACAGAGCCTTACCCTACAGAGATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR GCA 90 bp TTGCACAGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTaGACTGCTGACAGTCTAAATGACACCAGTGTCCCAGTTTTGTGC +
Preference number: 1 (lower is better)
Translates to: LHRCTWLPGVYRTIM*TADSLNDTSVPVLC
Trigger: GCACAAAACTGGGACACTGGTGTCATTTAGACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 90 bp GAACTTGTGGTACCTCTCCTCCCTATTTGGCTGGAACTCCAGCCTTaGTTTTTAATCACCTTTGCAAAAAGCCCTAGCTCAGATGGACTC +
Preference number: 1 (lower is better)
Translates to: ELVVPLLPIWLELQP*FLITFAKSPSSDGL
Trigger: GAGTCCATCTGAGCTAGGGCTTTTTGCAAAGGTGATTAAAAATCAAGGCTGGAGTTCCAGCCAAATAGGGAGGAGAGGTACCACAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 90 bp CCTGTTTTAACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTTGTaGTACCTCTCCTCCCTATTTGGCTGGAACTCCAGCCTTGATTTT +
Preference number: 1 (lower is better)
Translates to: PVLTTQPGSKFKMNL*YLSSLFGWNSSLDF
Trigger: AAAATCAAGGCTGGAGTTCCAGCCAAATAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGTTAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 90 bp TTTCTTCCACAGTTACCTGCTGATATTTGCCTCGTAAGATCCCCTTaGGATCTTCCTGTTTTAACTACCCAGCCCGGAAGCAAGTTTAAG +
Preference number: 1 (lower is better)
Translates to: FLPQLPADICLVRSP*DLPVLTTQPGSKFK
Trigger: CTTAAACTTGCTTCCGGGCTGGGTAGTTAAAACAGGAAGATCCCAAGGGGATCTTACGAGGCAAATATCAGCAGGTAACTGTGGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 90 bp AGGGTTTACTCTCAAGAGACTCTAGGCTCACTGCCCATAAACCTTTaGGTTGGACCAAATCTTAACATCCCTGTGGATTTGCTCATACTG +
Preference number: 1 (lower is better)
Translates to: RVYSQETLGSLPINL*VGPNLNIPVDLLIL
Trigger: CAGTATGAGCAAATCCACAGGGATGTTAAGATTTGGTCCAACTCAAAGGTTTATGGGCAGTGAGCCTAGAGTCTCTTGAGAGTAAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 90 bp AAACAGGAGGCTGTTAGTAGCAAGCTCCTCATGGGAAAGGGTATGTaGATCCACAAAGACGAGAACTATGGCAATAGCATAATACACACC +
Preference number: 1 (lower is better)
Translates to: KQEAVSSKLLMGKGM*IHKDENYGNSIIHT
Trigger: GGTGTGTATTATGCTATTGCCATAGTTCTCGTCTTTGTGGATTCACATACCCTTTCCCATGAGGAGCTTGCTACTAACAGCCTCCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 90 bp ACCTGCTCTAGTGTTCAGAGTTTTGCAGTACAAACCCAGTCCCTCTaGAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCAT +
Preference number: 1 (lower is better)
Translates to: TCSSVQSFAVQTQSL*NTSSKPLQCKPDHH
Trigger: ATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACTGGGTTTGTACTGCAAAACTCTGAACACTAGAGCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR GCA 90 bp AGATACACTGTTCCTCAACTTGAATGTGGACTGTGTTCCTATTTCTaGTTCACTTATTTGCCAAGGGCATGCAGGGTGACAAGTTTATTT +
Preference number: 1 (lower is better)
Translates to: RYTVPQLECGLCSYF*FTYLPRACRVTSLF
Trigger: AAATAAACTTGTCACCCTGCATGCCCTTGGCAAATAAGTGAAGCAGAAATAGGAACACAGTCCACATTCAAGTTGAGGAACAGTGTATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 90 bp TATAAAAACAACAGAAACAGGAGGCTGTTAGTAGCAAGCTCCTCATaGGAAAGGGTATGTGAATCCACAAAGACGAGAACTATGGCAATA +
Preference number: 1 (lower is better)
Translates to: YKNNRNRRLLVASSS*ERVCESTKTRTMAI
Trigger: TATTGCCATAGTTCTCGTCTTTGTGGATTCACATACCCTTTCCCATGAGGAGCTTGCTACTAACAGCCTCCTGTTTCTGTTGTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTATGGGTTGTGTGCTATTaGGGGCAGGGGCTGAAGCGG +
Preference number: 2 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLWVVCY*GQGLKR
Trigger: CCGCTTCAGCCCCTGCCCTCAATAGCACACAACCCA...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATCCAGAGCTCTCTCAGTaGTGGCACACCCAACTCCAC +
Preference number: 2 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHPELSQ*WHTQLH
Trigger: GTGGAGTTGGGTGTGCCATCACTGAGAGAGCTCTGG...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CCA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGACACCAAAAGGTGCTTaGGGTGGAGGGCTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: ESRGEETPASESQFLGSKTPKGA*GGGLGA
Trigger: TGCCCCCAGCCCTCCACCCCAAGCACCTTTTGGTGT...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATGGGCAGAGGTCATCTTaGACAGATGCACATGGTTGC +
Preference number: 2 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHGQRSS*TDAHGC
Trigger: GCAACCATGTGCATCTGTGCAAGATGACCTCTGCCC...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATCAAGCAATCCTCCCCTaGGACTGTTTTAAGTTGGCC +
Preference number: 2 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHQAILP*DCFKLA
Trigger: GGCCAACTTAAAACAGTCCCAGGGGAGGATTGCTTG...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTGCAGGGGGACCCTTCTaGAGTGTTGTCATGTGCTGG +
Preference number: 2 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVAGGPF*SVVMCW
Trigger: CCAGCACATGACAACACTTCAGAAGGGTCCCCCTGC...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
3UTR CAA 90 bp AACCCTTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTaGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTCTA +
Preference number: 2 (lower is better)
Translates to: NPSLGAEVILHRCTW*PGVYRTIMCTADSL
Trigger: TAGACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CAA 90 bp ATGCCCAATGCTGGGCAGTCTCCCATGCCTTCCACAGTGAAGGGCTaGAGAAAAATCACATCCAATGTCATGTGTTTCCAGCCACACCAA +
Preference number: 2 (lower is better)
Translates to: MPNAGQSPMPSTVKG*RKITSNVMCFQPHQ
Trigger: TTGGTGTGGCTGGAAACACATGACATTGGATGTGATTTTTCTCAAGCCCTTCACTGTGGAAGGCATGGGAGACTGCCCAGCATTGGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATAAGTTTAGTGGAGAATaGACATCCGCTGGGCTAGAA +
Preference number: 2 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHKFSGE*TSAGLE
Trigger: TTCTAGCCCAGCGGATGTTCATTCTCCACTAAACTT...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATTTAGACCAGCAGTTCTaGGACAGGGATTATTTGCTT +
Preference number: 2 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHLDQQF*DRDYLL
Trigger: AAGCAAATAATCCCTGTCTCAGAACTGCTGGTCTAA...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp ACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTTGTGGTACCTCTCCTCCCTATTCCCAGTCAGCAACTaGATTTCTCCCCTCCAATGT +
Preference number: 2 (lower is better)
Translates to: TTQPGSKFKMNLWYLSSLFPVSN*ISPLQC
Trigger: ACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAA...TAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTAGAGAAAAACAGACACTaGCTACTGGATCACATGCGT +
Preference number: 2 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLEKNRH*LLDHMR
Trigger: ACGCATGTGATCCAGTAGGCAGTGTCTGTTTTTCTC...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CAA 90 bp CTTCCTGTTTTAACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTaGTGGTACCTCTCCTCCCTATTTGGCTGGAACTCCAGCCTTGAT +
Preference number: 2 (lower is better)
Translates to: LPVLTTQPGSKFKMN*WYLSSLFGWNSSLD
Trigger: ATCAAGGCTGGAGTTCCAGCCAAATAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGTTAAAACAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CAA 90 bp CTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTCAGAGTTTaGCAGTACAAACCCAGTCCCTCTGAAATACGTCTTCCAAGCCAC +
Preference number: 2 (lower is better)
Translates to: LTAQVLVEPALVFRV*QYKPSPSEIRLPSH
Trigger: GTGGCTTGGAAGACGTATTTCAGAGGGACTGGGTTTGTACTGCAAAACTCTGAACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACGCAGGGGGACCCTTCTaGAGTGTTGTCATGTGCTGG +
Preference number: 2 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYAGGPF*SVVMCW
Trigger: CCAGCACATGACAACACTTCAGAAGGGTCCCCCTGC...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTACAATCATAGCTCACTaGAAACCTCAGACTCCTGGG +
Preference number: 2 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVTIIAH*KPQTPG
Trigger: CCCAGGAGTCTGAGGTTTGCAGTGAGCTATGATTGT...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTCACTGTTCCTCAACTTaGATGTGGACTGTGTTCCTA +
Preference number: 2 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVHCSST*MWTVFL
Trigger: TAGGAACACAGTCCACATTCAAGTTGAGGAACAGTG...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTAACACAGATATGTTGTaGCTGCTGTGCTCTTCCCAT +
Preference number: 2 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVNTDML*LLCSSH
Trigger: ATGGGAAGAGCACAGCAGGCACAACATATCTGTGTT...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATTCACAACTGATACATTaGGGATGCTTTCACCTAATA +
Preference number: 2 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHSQLIH*GCFHLI
Trigger: TATTAGGTGAAAGCATCCCCAATGTATCAGTTGTGA...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CAA 90 bp AAACACTTACGAGAAAAACAGACACTGCCTACTGGATCACATGCGTaGTCAGAGAGGGCACTCTACGCTTTTAGAGGTAGACCATTGTGT +
Preference number: 2 (lower is better)
Translates to: KHLREKQTLPTGSHA*SERALYAFRGRPLC
Trigger: ACACAATGGTCTACCTCTAAAAGCGTAGAGTGCCCTCTCTGACAACGCATGTGATCCAGTAGGCAGTGTCTGTTTTTCTCGTAAGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTCTGGAACTCCAGCCTTaGTTTTTAATCACCTTTGCA +
Preference number: 2 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVLELQP*FLITFA
Trigger: TGCAAAGGTGATTAAAAATCAAGGCTGGAGTTCCAG...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTGCCTACTGGATCACATaGGTTGTCAGAGAGGGCACT +
Preference number: 2 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIIAYWIT*VVREGT
Trigger: AGTGCCCTCTCTGACAACGCATGTGATCCAGTAGGC...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTTCTCCTTGTCCCAAATaGAAGGGTTTACTCTCAAGA +
Preference number: 2 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVSPCPK*KGLLSR
Trigger: TCTTGAGAGTAAACCCTTGCATTTGGGACAAGGAGA...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CCA 90 bp GACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCATTCCCACTCAGCTCATCCCCTTaGCAAGGGGTACAGCAACTG +
Preference number: 2 (lower is better)
Translates to: DNYRRSSFLFSSLGPAFPLSSSP*QGVQQL
Trigger: CAGTTGCTGTACCCCTTGCCAAGGGGATGAGCTGAG...TGGGAATGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTATAAGAGAGTTTCTGTaGCCATTAAGAGGACTCCAT +
Preference number: 2 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSIREFL*PLRGLH
Trigger: ATGGAGTCCTCTTAATGGTCACAGAAACTCTCTTAT...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACAGGGCCCTGTTTGCCTaGAAAGGAAGTGTGAAACCA +
Preference number: 2 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYRALFA*KGSVKP
Trigger: TGGTTTCACACTTCCTTTTCAGGCAAACAGGGCCCT...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp CACTCTGTCCACAGACACAGGCTTATCCATGAAGATATCCAAGGAAGGAAGTTCTTTGGGTTGTTCTGGTaGACAGATAACTCTAAGGAG +
Preference number: 2 (lower is better)
Translates to: HSVHRHRLIHEDIQGRKFFGLFW*TDNSKE
Trigger: CTCCTTAGAGTTATCTGTTCACCAGAACAACCCAAA...GAACTTCCTTCCTTGGATATCTTCATGGATAAGCCTGTGTCTGTGGACAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTACATGTGGAAGGCCATaGACCCCTAAATCTAAAAAT +
Preference number: 2 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVTCGRP*TPKSKN
Trigger: ATTTTTAGATTTAGGGGTTCATGGCCTTCCACATGT...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACCAATGTTTCTGCGACTaGAAACCTGAAGGCGACGAG +
Preference number: 2 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYQCFCD*KPEGDE
Trigger: CTCGTCGCCTTCAGGTTTGCAGTCGCAGAAACATTG...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTCAGCTATTGATTGGGTaGCCAATTCTATCATCTTTT +
Preference number: 2 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSQLLIG*PILSSF
Trigger: AAAAGATGATAGAATTGGTCACCCAATCAATAGCTG...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTGATCTTGCTCTAGTGTaGGCACTCCTGAACTTCACA +
Preference number: 2 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIIDLALV*ALLNFT
Trigger: TGTGAAGTTCAGGAGTGCTCACACTAGAGCAAGATC...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTCTGATACATTGGGGATaGTTTCACCTAATAGCTTTT +
Preference number: 2 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVLIHWG*FHLIAF
Trigger: AAAAGCTATTAGGTGAAAGCATCCCCAATGTATCAG...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTAGGAAGCTGAGAAATTaGAGAGAACCTGACAATTAT +
Preference number: 2 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVRKLRN*REPDNY
Trigger: ATAATTGTCAGGTTCTCTCCAATTTCTCAGCTTCCT...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp GAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCATTACCTGCTGATATTTaGCTCGTAAGATCCCCTTGG +
Preference number: 2 (lower is better)
Translates to: EPDNYRRSSFLFSSLGPALPADI*LVRSPW
Trigger: CCAAGGGGATCTTACGAGGCAAATATCAGCAGGTAA...TGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp CTGAGAAATTGGAGAGAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAAGGAGGGCCCTGTTTaGCTGAAAAGGAAGTGTGAA +
Preference number: 2 (lower is better)
Translates to: LRNWREPDNYRRSSFLFSKEGPV*LKRKCE
Trigger: TTCACACTTCCTTTTCAGGCAAACAGGGCCCTCCTT...GCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTCTCTCCAATTTCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CCA 90 bp GAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCAAGGAACATGTGCTTTTaGGTTGTTCTGGTGAACAGA +
Preference number: 2 (lower is better)
Translates to: EPDNYRRSSFLFSSLGPARNMCF*VVLVNR
Trigger: TCTGTTCACCAGAACAACCCAAAAGCACATGTTCCT...TGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CCA 90 bp GACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCATTCCCACTCGTAAGATCCCCTTaGGATCTTCCTGTTTTAACT +
Preference number: 2 (lower is better)
Translates to: DNYRRSSFLFSSLGPAFPLVRSP*DLPVLT
Trigger: AGTTAAAACAGGAAGATCCCAAGGGGATCTTACGAG...TGGGAATGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp GACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCATTCCCATCCATGACTTATCTCTaGAGTTTCGAGCCAATGTTT +
Preference number: 2 (lower is better)
Translates to: DNYRRSSFLFSSLGPAFPSMTYL*SFEPMF
Trigger: AAACATTGGCTCGAAACTTCAGAGATAAGTCATGGA...TGGGAATGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp CTGAGAAATTGGAGAGAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCCCAATGTCCTCTCCATaGCTTATCTCTGAAGTTTCG +
Preference number: 2 (lower is better)
Translates to: LRNWREPDNYRRSSFLFSPMSSP*LISEVS
Trigger: CGAAACTTCAGAGATAAGTCATGGAGAGGACATTGG...GCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTCTCTCCAATTTCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp CTGAGAAATTGGAGAGAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCGTGAAACCAGAGGATTaGCTCCAATATCCCTTTCCA +
Preference number: 2 (lower is better)
Translates to: LRNWREPDNYRRSSFLFSVKPED*LQYPFP
Trigger: TGGAAAGGGATATTGGAGGCAATCCTCTGGTTTCAC...GCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTCTCTCCAATTTCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTAGAAGCAAGTTTAAGATaGACTTGTGGTACCTCTCCT +
Preference number: 2 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLEASLR*TCGTSP
Trigger: AGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTC...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR TCA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTAGAACTCATTAGGTCCTaGGATTTCCTTTCTTCCACA +
Preference number: 2 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLELIRS*DFLSST
Trigger: TGTGGAAGAAAGGAAATCTCAGGACCTAATGAGTTC...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR GCA 90 bp CTGAGAAATTGGAGAGAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCCTGTGTTCCTATTTCTaGTTCACTTATTTGCCAAGG +
Preference number: 2 (lower is better)
Translates to: LRNWREPDNYRRSSFLFSLCSYF*FTYLPR
Trigger: CCTTGGCAAATAAGTGAAGCAGAAATAGGAACACAG...GCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTCTCTCCAATTTCTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR GCA 72 bp CCACGTGGCACTAACACAGATATGTTGTGCCTGCTGTaGTCTTCCCATTGTCCCCACACAAGCCACAGCATC +
Preference number: 3 (lower is better)
Translates to: PRGTNTDMLCLL*SSHCPHTSHSI
Trigger: GATGCTGTGGCTTGTGTGGGGACAATGGGAAGAGCACAGCAGGCACAACATATCTGTGTTAGTGCCACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 72 bp TGTAGGGTAAGGCTCTGTGCCCATGCAGGTTTAGGATaGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACAC +
Preference number: 3 (lower is better)
Translates to: CRVRLCAHAGLG*VALPSPSQNKH
Trigger: GTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATGGGCACAGAGCCTTACCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 72 bp GCTGATTGTAAAACCTGTCTTTCGAGCCTCAGCACTTaGGCCCCACTCTGTCCACAGACACAGGCTTATCCA +
Preference number: 3 (lower is better)
Translates to: ADCKTCLSSLST*APLCPQTQAYP
Trigger: TGGATAAGCCTGTGTCTGTGGACAGAGTGGGGCCCAAGTGCTGAGGCTCGAAAGACAGGTTTTACAATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CAA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATCACAGATGCACATGGTaGCCTGGAGTCTATCGTACA +
Preference number: 3 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHHRCTW*PGVYRT
Trigger: TGTACGATAGACTCCAGGCAACCATGTGCATCTGTG...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CAA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGGGGGCTGAAGCGGTGTaGTATCATAGCTTGTCTCTT +
Preference number: 3 (lower is better)
Translates to: ESRGEETPASESQFLGSKGAEAV*YHSLSL
Trigger: AAGAGACAAGCTATGATACAACACCGCTTCAGCCCC...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CAA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTAAAGCTGATATGTGGGTaGTGTGCTATTGAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLKLICG*CAIEGR
Trigger: CCTGCCCTCAATAGCACACAACCCACATATCAGCTT...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR GCA 72 bp GTGCTGACAGTCCACAGCAGGCAATGTTTCTGCGACTaGAAACCTGAAGGCGACGAGGAGTTTCTACTTTCT +
Preference number: 3 (lower is better)
Translates to: VLTVHSRQCFCD*KPEGDEEFLLS
Trigger: AGAAAGTAGAAACTCCTCGTCGCCTTCAGGTTTGCAGTCGCAGAAACATTGCCTGCTGTGGACTGTCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR GCA 72 bp TTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTaGCTGGAGTCTATCGTACAATCATGTGCACTGCTG +
Preference number: 3 (lower is better)
Translates to: LGQRSSCTDAHG*LESIVQSCALL
Trigger: CAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR GCA 72 bp AATCAGGGACTTGAAATGGAAACGTTAACAGCCACATaGCCAATGCTGGGCAGTCTCCCATGCCTTCCACAG +
Preference number: 3 (lower is better)
Translates to: NQGLEMETLTAT*PMLGSLPCLPQ
Trigger: CTGTGGAAGGCATGGGAGACTGCCCAGCATTGGGCATGTGGCTGTTAACGTTTCCATTTCAAGTCCCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 72 bp ACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTTGTaGTACCTCTCCTCCCTATTTGGCTGGAACTCCAGC +
Preference number: 3 (lower is better)
Translates to: TTQPGSKFKMNL*YLSSLFGWNSS
Trigger: GCTGGAGTTCCAGCCAAATAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 72 bp AGTCCACAGCAGGCAATGTTTCTGCGACTGCAAACCTaGAGGCGACGAGGAGTTTCTACTTTCTTGATCAGC +
Preference number: 3 (lower is better)
Translates to: SPQQAMFLRLQT*RRRGVSTFLIS
Trigger: GCTGATCAAGAAAGTAGAAACTCCTCGTCGCCTTCAGGTTTGCAGTCGCAGAAACATTGCCTGCTGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 72 bp GACAGTCTAAATGACACCAGTGTCCCAGTTTTGTGCTaGCAGTCCACAGCAGGCAATGTTTCTGCGACTGCA +
Preference number: 3 (lower is better)
Translates to: DSLNDTSVPVLC*QSTAGNVSATA
Trigger: TGCAGTCGCAGAAACATTGCCTGCTGTGGACTGTCAGCACAAAACTGGGACACTGGTGTCATTTAGACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR GCA 72 bp AGTTTTGTGCTGACAGTCCACAGCAGGCAATGTTTCTaGGACTGCAAACCTGAAGGCGACGAGGAGTTTCTA +
Preference number: 3 (lower is better)
Translates to: SFVLTVHSRQCF*DCKPEGDEEFL
Trigger: TAGAAACTCCTCGTCGCCTTCAGGTTTGCAGTCGCAGAAACATTGCCTGCTGTGGACTGTCAGCACAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR GCA 72 bp AACCCTTCTCTTGGGGCAGAGGTCATCTTGCACAGATaGACATGGTTGCCTGGAGTCTATCGTACAATCATG +
Preference number: 3 (lower is better)
Translates to: NPSLGAEVILHR*TWLPGVYRTIM
Trigger: CATGATTGTACGATAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 72 bp CAGTTACCTGCTGATATTTGCCTCGTAAGATCCCCTTaGGATCTTCCTGTTTTAACTACCCAGCCCGGAAGC +
Preference number: 3 (lower is better)
Translates to: QLPADICLVRSP*DLPVLTTQPGS
Trigger: GCTTCCGGGCTGGGTAGTTAAAACAGGAAGATCCCAAGGGGATCTTACGAGGCAAATATCAGCAGGTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 72 bp TCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATaGTTGCCTGGAGTCTATCGTACAATCATGTGCACT +
Preference number: 3 (lower is better)
Translates to: SLGAEVILHRCT*LPGVYRTIMCT
Trigger: AGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CAA 90 bp CACTCTGTCCACAGACACAGGCTTATCCATGAAGATATCCAAGGAAGGAAGTTCACTGGATCACATGCGTaGTCAGAGAGGGCACTCTAC +
Preference number: 3 (lower is better)
Translates to: HSVHRHRLIHEDIQGRKFTGSHA*SERALY
Trigger: GTAGAGTGCCCTCTCTGACAACGCATGTGATCCAGT...GAACTTCCTTCCTTGGATATCTTCATGGATAAGCCTGTGTCTGTGGACAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CAA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTTTCTGCTTCACTTATTaGCCAAGGGCATGCAGGGTG +
Preference number: 3 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVFCFTY*PRACRV
Trigger: CACCCTGCATGCCCTTGGCAAATAAGTGAAGCAGAA...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CAA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATCTTCACATATTCTCCTaGTCCCAAATGCAAGGGTTT +
Preference number: 3 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHLHIFS*SQMQGF
Trigger: AAACCCTTGCATTTGGGACAAGGAGAATATGTGAAG...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 72 bp TCTCTTCAGAAAGCTGATATGTGGGTTGTGTGCTATTaGGGGCAGGGGCTGAAGCGGTGTTGTATCATAGCT +
Preference number: 3 (lower is better)
Translates to: SLQKADMWVVCY*GQGLKRCCIIA
Trigger: AGCTATGATACAACACCGCTTCAGCCCCTGCCCTCAATAGCACACAACCCACATATCAGCTTTCTGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR GCA 72 bp TGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTaGACTGCTGACAGTCTAAATGACACCAGTGTCCCA +
Preference number: 3 (lower is better)
Translates to: CTWLPGVYRTIM*TADSLNDTSVP
Trigger: TGGGACACTGGTGTCATTTAGACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 72 bp TTTCTTGATCAGCATGAAGGGGCAGAGATCACCAGTTaGTGGCAACATGTGGAAGGCCATGAACCCCTAAAT +
Preference number: 3 (lower is better)
Translates to: FLDQHEGAEITS*WQHVEGHEPLN
Trigger: ATTTAGGGGTTCATGGCCTTCCACATGTTGCCACCAACTGGTGATCTCTGCCCCTTCATGCTGATCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 72 bp GCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTaGCTGCCTCATGGAATAATCCCCCTTTGCTTAGTA +
Preference number: 3 (lower is better)
Translates to: ADKVMNIMAPCS*LPHGIIPLCLV
Trigger: TACTAAGCAAAGGGGGATTATTCCATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CAA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACCCTCAGCTCATCCCCTaGGCAAGGGGTACAGCAACT +
Preference number: 3 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYPQLIP*ARGTAT
Trigger: AGTTGCTGTACCCCTTGCCAAGGGGATGAGCTGAGG...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 72 bp AACAGAAACAGGAGGCTGTTAGTAGCAAGCTCCTCATaGGAAAGGGTATGTGAATCCACAAAGACGAGAACT +
Preference number: 3 (lower is better)
Translates to: NRNRRLLVASSS*ERVCESTKTRT
Trigger: AGTTCTCGTCTTTGTGGATTCACATACCCTTTCCCATGAGGAGCTTGCTACTAACAGCCTCCTGTTTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CAA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACCTCCACCCCATGTCTTaGAGGAAGCTGAGAAATTGG +
Preference number: 3 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYLHPMS*RKLRNW
Trigger: CCAATTTCTCAGCTTCCTCAAAGACATGGGGTGGAG...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 72 bp TCTCAAGAGACTCTAGGCTCACTGCCCATAAACCTTTaGGTTGGACCAAATCTTAACATCCCTGTGGATTTG +
Preference number: 3 (lower is better)
Translates to: SQETLGSLPINL*VGPNLNIPVDL
Trigger: CAAATCCACAGGGATGTTAAGATTTGGTCCAACTCAAAGGTTTATGGGCAGTGAGCCTAGAGTCTCTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 72 bp GCTGTTAGTAGCAAGCTCCTCATGGGAAAGGGTATGTaGATCCACAAAGACGAGAACTATGGCAATAGCATA +
Preference number: 3 (lower is better)
Translates to: AVSSKLLMGKGM*IHKDENYGNSI
Trigger: TATGCTATTGCCATAGTTCTCGTCTTTGTGGATTCACATACCCTTTCCCATGAGGAGCTTGCTACTAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR GCA 72 bp TATAGTGATGAAAACACTTACGAGAAAAACAGACACTaGCTACTGGATCACATGCGTTGTCAGAGAGGGCAC +
Preference number: 3 (lower is better)
Translates to: YSDENTYEKNRH*LLDHMRCQRGH
Trigger: GTGCCCTCTCTGACAACGCATGTGATCCAGTAGGCAGTGTCTGTTTTTCTCGTAAGTGTTTTCATCACTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CCA 72 bp TTGGCAAGGGGTACAGCAACTGGTAAGATGTTTAATTaGCTGATTGTAAAACCTGTCTTTCGAGCCTCAGCA +
Preference number: 3 (lower is better)
Translates to: LARGTATGKMFN*LIVKPVFRASA
Trigger: TGCTGAGGCTCGAAAGACAGGTTTTACAATCAGCCAATTAAACATCTTACCAGTTGCTGTACCCCTTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CAA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTAACCTCTCCTCCCTATTaGGCTGGAACTCCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLTSPPY*AGTPAL
Trigger: CAAGGCTGGAGTTCCAGCCAAATAGGGAGGAGAGGT...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 72 bp AGAGATCACCAGTTGGTGGCAACATGTGGAAGGCCATaGACCCCTAAATCTAAAAATGTCACTAAGAGTCAA +
Preference number: 3 (lower is better)
Translates to: RDHQLVATCGRP*TPKSKNVTKSQ
Trigger: TTGACTCTTAGTGACATTTTTAGATTTAGGGGTTCATGGCCTTCCACATGTTGCCACCAACTGGTGATCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 72 bp AGTGTTCAGAGTTTTGCAGTACAAACCCAGTCCCTCTaGAATACGTCTTCCAAGCCACTTCAATGTAAACCT +
Preference number: 3 (lower is better)
Translates to: SVQSFAVQTQSL*NTSSKPLQCKP
Trigger: AGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACTGGGTTTGTACTGCAAAACTCTGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CAA 90 bp GACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCATTCCCACCTCGTAAGATCCCCTaGGGATCTTCCTGTTTTAAC +
Preference number: 3 (lower is better)
Translates to: DNYRRSSFLFSSLGPAFPPRKIP*GSSCFN
Trigger: GTTAAAACAGGAAGATCCCAAGGGGATCTTACGAGG...TGGGAATGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR-3UTR CAA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTATGTGAAACCAGAGGATaGCCTCCAATATCCCTTTCC +
Preference number: 3 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLCETRG*PPISLS
Trigger: GGAAAGGGATATTGGAGGCAATCCTCTGGTTTCACA...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR TCA 72 bp TTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTaGAGTTTCGAGCCAATGTTTAAAATGTACACTATT +
Preference number: 3 (lower is better)
Translates to: FLPSNVLSMTYL*SFEPMFKMYTI
Trigger: AATAGTGTACATTTTAAACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
3UTR TCA 72 bp TTGAATGCTAAGAATGATACACTGTTGAACATCTCCTaGATGGTTTGCCTTCTTGTAAATCATACCAATTGT +
Preference number: 3 (lower is better)
Translates to: LNAKNDTLLNIS*MVCLLVNHTNC
Trigger: ACAATTGGTATGATTTACAAGAAGGCAAACCATTCAGGAGATGTTCAACAGTGTATCATTCTTAGCATTCAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATCAGCCTGGCCCAGGCTaGCCAGGTCCCGCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANQPGPG*PGPARR
Trigger: GCGACGGGCGGGACCTGGTCAGCCTGGGCCAGGCTG...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATGCCCGAGGAATGGCATaGCACCGCGAGCGGACTAGA +
Preference number: 4 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHARGMA*HRERTR
Trigger: TCTAGTCCGCTCGCGGTGCCATGCCATTCCTCGGGC...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCGTGGGCTCGGGGACGTaGCACCCGGGGCGGATGCTC +
Preference number: 4 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLVGSGT*HPGRML
Trigger: GAGCATCCGCCCCGGGTGGCACGTCCCCGAGCCCAC...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGGGCACCCTGCGGGGTaGCGGGCGCGGAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANGHPAG*RARRGS
Trigger: AGATCCTCTCCGCGCCCGCCACCCCGCAGGGTGCCC...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp CATGCAGGTTTAGGATGGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGCTTGGGGTGGAGGGCTaGGGGCATAGAAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: HAGLGWVALPSPSQNKHQLGVEG*GHRRSG
Trigger: GCCTGACCTTCTATGCCCCCAGCCCTCCACCCCAAG...CTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCGCAGCCGGTCTTCGCTaGGCACGTGCAGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLAAGLR*ARAGRG
Trigger: CCCCCGACCTGCACGTGCTCAGCGAAGACCGGCTGC...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTGTCTTCACCCAGTTCTaGCCGGGGGACCGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSVFTQF*PGDRQS
Trigger: GGACTGGCGGTCCCCCGGGCAGAACTGGGTGAAGAC...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATGCAGGCCTGGTGATCTaGATGTTGTTCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHAGLVI*MLFSCC
Trigger: GCAGCAGCTGAACAACATTCAGATCACCAGGCCTGC...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATCTGCGACTGCAAACCTaGAGGCGACGAGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHLRLQT*RRRGVS
Trigger: AGAAACTCCTCGTCGCCTTCAGGTTTGCAGTCGCAG...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTTCTTCGCTGAGCACGTaGAGGTCGGGGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVSSLST*RSGAAW
Trigger: CCAGGCTGCCCCCGACCTGCACGTGCTCAGCGAAGA...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACGTGGGCTCGGGGACGTaGCACCCGGGGCGGATGCTC +
Preference number: 4 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYVGSGT*HPGRML
Trigger: GAGCATCCGCCCCGGGTGGCACGTCCCCGAGCCCAC...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTGTCTTCACCCAGTTCTaGCCGGGGGACCGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVVFTQF*PGDRQS
Trigger: GGACTGGCGGTCCCCCGGGCAGAACTGGGTGAAGAC...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp ACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTTGTGGTACCTCTCCTCCCTAAGCCACACCAAAAGGTaGTTGGGGTGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TTQPGSKFKMNLWYLSSLSHTKR*LGWRAG
Trigger: CCCAGCCCTCCACCCCAAGCACCTTTTGGTGTGGCT...TAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATAGCGGACTAGACGGATaGGGAGACGGGGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANSGLDG*GDGAGL
Trigger: CAGGCCGGCCCCGTCTCCCCATCCGTCTAGTCCGCT...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATCATGCAGGTTTAGGATaGGTGGCGCTTCCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHHAGLG*VALPSP
Trigger: AGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTTGGGTTGTGTGCTATTaGGGGCAGGGGCTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVWVVCY*GQGLKR
Trigger: CCGCTTCAGCCCCTGCCCTCAATAGCACACAACCCA...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTAGGTCGCTCACGAAACTaGCGCTCTTCTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLGRSRN*RSSHPG
Trigger: TCCTGGATGAGAAGAGCGGCAGTTTCGTGAGCGACC...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp CATGCAGGTTTAGGATGGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGAAGGCTCTGTGCCCATaGAGGTTTAGGATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HAGLGWVALPSPSQNKHQKALCP*RFRMGG
Trigger: GCCACCCATCCTAAACCTGCATGGGCACAGAGCCTT...CTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTAAGCTGCTGCTGCCAGTaGAGAATCGTCTCCATCCGA +
Preference number: 4 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLSCCCQ*RIVSIR
Trigger: TCGGATGGAGACGATTCTCCACTGGCAGCAGCAGCT...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp GACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCATTCCCAGGGCACCCTGCGGGGTaGCGGGCGCGGAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: DNYRRSSFLFSSLGPAFPGHPAG*RARRGS
Trigger: AGATCCTCTCCGCGCCCGCCACCCCGCAGGGTGCCC...TGGGAATGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTGCCCGAGGAATGGCATaGCACCGCGAGCGGACTAGA +
Preference number: 4 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVARGMA*HRERTR
Trigger: TCTAGTCCGCTCGCGGTGCCATGCCATTCCTCGGGC...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCGTCCTGCCCGAGGAATaGCATGGCACCGCGAGCGGA +
Preference number: 4 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLVLPEE*HGTASG
Trigger: TCCGCTCGCGGTGCCATGCCATTCCTCGGGCAGGAC...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATAGCAGGCAATGTTTCTaGGACTGCAAACCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHSRQCF*DCKPEG
Trigger: GCCTTCAGGTTTGCAGTCGCAGAAACATTGCCTGCT...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTAATGTTGTGCCTGCTGTaGTCTTCCCATTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLMLCLL*SSHCPH
Trigger: GTGGGGACAATGGGAAGAGCACAGCAGGCACAACAT...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACAGCGGACTAGACGGATaGGGAGACGGGGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYSGLDG*GDGAGL
Trigger: CAGGCCGGCCCCGTCTCCCCATCCGTCTAGTCCGCT...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATACGGGGAGAGCCCACTaGTACCATCTTGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHTGRAH*YHLGKH
Trigger: ATGTTTACCAAGATGGTACCAGTGGGCTCTCCCCGT...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTCCACATGCCCAATGCTaGGCAGTCTCCCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVPHAQC*AVSHAF
Trigger: GAAGGCATGGGAGACTGCCCAGCATTGGGCATGTGG...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCGCAGCCGGTCTTCGCTaGGCACGTGCAGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLAAGLR*ARAGRG
Trigger: CCCCCGACCTGCACGTGCTCAGCGAAGACCGGCTGC...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTCTGGGTTATTGGCAGTaGACGGATGGTCAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSLGYWQ*TDGQCP
Trigger: AGGGCACTGACCATCCGTGCACTGCCAATAACCCAG...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATCAGCCACATGCCCAATaGTGGGCAGTCTCCCATGCC +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANQPHAQ*WAVSHA
Trigger: GGCATGGGAGACTGCCCAGCATTGGGCATGTGGCTG...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTAACGGAGCAGCTCTCTaGGTTATTGGCAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVNGAAL*VIGSAR
Trigger: CCGTGCACTGCCAATAACCCAGAGAGCTGCTCCGTT...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACGTCCTGCCCGAGGAATaGCATGGCACCGCGAGCGGA +
Preference number: 4 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYVLPEE*HGTASG
Trigger: TCCGCTCGCGGTGCCATGCCATTCCTCGGGCAGGAC...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGCAAGCAATCCTCCCCTaGGACTGTTTTAAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ESRGEETPASESQFLGSKQAILP*DCFKLA
Trigger: GGCCAACTTAAAACAGTCCCAGGGGAGGATTGCTTG...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTCTCAGCTCATCCCCTTaGCAAGGGGTACAGCAACTG +
Preference number: 4 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSLSSSP*QGVQQL
Trigger: CAGTTGCTGTACCCCTTGCCAAGGGGATGAGCTGAG...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTACTCCTGGCTGCCTCATaGAATAATCCCCCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLLLAAS*NNPPLL
Trigger: AAGCAAAGGGGGATTATTCCATGAGGCAGCCAGGAG...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp ACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTTGTGGTACCTCTCCTCCCTAATGGCCCCTTGCTCCTaGCTGCCTCATGGAATAATC +
Preference number: 4 (lower is better)
Translates to: TTQPGSKFKMNLWYLSSLMAPCS*LPHGII
Trigger: GATTATTCCATGAGGCAGCCAGGAGCAAGGGGCCAT...TAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CAA 72 bp CTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTaGCCTGGAGTCTATCGTACAATCATGTGCACTGCT +
Preference number: 4 (lower is better)
Translates to: LGAEVILHRCTW*PGVYRTIMCTA
Trigger: AGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CAA 72 bp TTAGACCGTAACCCTTCTCTTGGGGCAGAGGTCATCTaGCACAGATGCACATGGTTGCCTGGAGTCTATCGT +
Preference number: 4 (lower is better)
Translates to: LDRNPSLGAEVI*HRCTWLPGVYR
Trigger: ACGATAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAAGGGTTACGGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTAGAAGTCCAGTCTGTTaGAAGCTTCCCCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVRSPVC*KLPPGC
Trigger: GCACCCTGGGGGAAGCTTTCAACAGACTGGACTTCT...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR TCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGCAGGGGGACCCTTCTaGAGTGTTGTCATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANAGGPF*SVVMCW
Trigger: CCAGCACATGACAACACTTCAGAAGGGTCCCCCTGC...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR TCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTAGATCTTGCTCTAGTGTaGGCACTCCTGAACTTCACA +
Preference number: 4 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLDLALV*ALLNFT
Trigger: TGTGAAGTTCAGGAGTGCTCACACTAGAGCAAGATC...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp ACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTTGTGGTACCTCTCCTCCCTACAAACCCAGTCCCTCTaGAATACGTCTTCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: TTQPGSKFKMNLWYLSSLQTQSL*NTSSKP
Trigger: TGGCTTGGAAGACGTATTTCAGAGGGACTGGGTTTG...TAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp CATGCAGGTTTAGGATGGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGGCAGGGCCTAAGTTTTaGGAGATTCTCCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: HAGLGWVALPSPSQNKHQAGPKF*EILQKA
Trigger: AGCTTTCTGGAGAATCTCTCAAAACTTAGGCCCTGC...CTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATGTGAAACCAGAGGATTaGCTCCAATATCCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHVKPED*LQYPFP
Trigger: TGGAAAGGGATATTGGAGGCAATCCTCTGGTTTCAC...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp CATGCAGGTTTAGGATGGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGACAATCATAGCTCACTaGAAACCTCAGACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HAGLGWVALPSPSQNKHQTIIAH*KPQTPG
Trigger: CCCAGGAGTCTGAGGTTTGCAGTGAGCTATGATTGT...CTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTACAGATATGTTGTGCCTaGTGTGCTCTTCCCATTGTC +
Preference number: 4 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLQICCA*CALPIV
Trigger: GACAATGGGAAGAGCACAGCAGGCACAACATATCTG...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGTGGATTTGCTCATACTaGCCTGGGCAGAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: ESRGEETPASESQFLGSKWICSY*PGQNSF
Trigger: GAAAGAGTTCTGCCCAGGGCAGTATGAGCAAATCCA...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTAGCTCTCTGGGTTATTaGCAGTGCACGGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVSSLGY*QCTDGQ
Trigger: CTGACCATCCGTGCACTGCCAATAACCCAGAGAGCT...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp CATGCAGGTTTAGGATGGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGTTGCACAGATGCACATaGTTGCCTGGAGTCTATCGT +
Preference number: 4 (lower is better)
Translates to: HAGLGWVALPSPSQNKHQLHRCT*LPGVYR
Trigger: ACGATAGACTCCAGGCAACCATGTGCATCTGTGCAA...CTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp CATGCAGGTTTAGGATGGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGGTAGCAAGCTCCTCATaGGAAAGGGTATGTGAATCC +
Preference number: 4 (lower is better)
Translates to: HAGLGWVALPSPSQNKHQVASSS*ERVCES
Trigger: GGATTCACATACCCTTTCCCATGAGGAGCTTGCTAC...CTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp CACTCTGTCCACAGACACAGGCTTATCCATGAAGATATCCAAGGAAGGAAGTTCCGCTCAGCCTCTGCATaGTGTTCAGTTGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: HSVHRHRLIHEDIQGRKFRSASA*CSVVGT
Trigger: TGTGCCTACAACTGAACATCATGCAGAGGCTGAGCG...GAACTTCCTTCCTTGGATATCTTCATGGATAAGCCTGTGTCTGTGGACAGAGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGCCAATGTCCTCTCCATaGCTTATCTCTGAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: ESRGEETPASESQFLGSKPMSSP*LISEVS
Trigger: CGAAACTTCAGAGATAAGTCATGGAGAGGACATTGG...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTCCTGAAAAGGAAGTGTaGAACCAGAGGATTGCCTCC +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVPEKEV*NQRIAS
Trigger: GGAGGCAATCCTCTGGTTTCACACTTCCTTTTCAGG...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTAGGGCCCTGTTTGCCTaGAAAGGAAGTGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSRALFA*KGSVKP
Trigger: TGGTTTCACACTTCCTTTTCAGGCAAACAGGGCCCT...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGTATGACCTTGTTTGTTaGAGCCATCAAGGACCCAAG +
Preference number: 4 (lower is better)
Translates to: ESRGEETPASESQFLGSKYDLVC*SHQGPK
Trigger: CTTGGGTCCTTGATGGCTTCAACAAACAAGGTCATA...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATCTGGGTTATTGGCAGTaGACGGATGGTCAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANLGYWQ*TDGQCP
Trigger: AGGGCACTGACCATCCGTGCACTGCCAATAACCCAG...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGGTCGCTCACGAAACTaGCGCTCTTCTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANGRSRN*RSSHPG
Trigger: TCCTGGATGAGAAGAGCGGCAGTTTCGTGAGCGACC...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp CATGCAGGTTTAGGATGGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGACAGATGCACATGGTTaGCTGGAGTCTATCGTACAA +
Preference number: 4 (lower is better)
Translates to: HAGLGWVALPSPSQNKHQTDAHG*LESIVQ
Trigger: TTGTACGATAGACTCCAGGCAACCATGTGCATCTGT...CTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTGTCATCTTGCACAGATaGACATGGTTGCCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVVILHR*TWLPGV
Trigger: GACTCCAGGCAACCATGTGCATCTGTGCAAGATGAC...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTACATCCCTGTGGATTTaGTCATACTGCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVTSLWI*SYCPGQ
Trigger: CTGCCCAGGGCAGTATGAGCAAATCCACAGGGATGT...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTTCGGAGAAGTGGTACTaGCAGAGTTTCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVSEKWY*QSFFHS
Trigger: GCTGTGGAAGAAACTCTGCCAGTACCACTTCTCCGA...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp CACTCTGTCCACAGACACAGGCTTATCCATGAAGATATCCAAGGAAGGAAGTTCTGCCGCTCGGAGAAGTaGTACTGGCAGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: HSVHRHRLIHEDIQGRKFCRSEK*YWQSFF
Trigger: GAAGAAACTCTGCCAGTACCACTTCTCCGAGCGGCA...GAACTTCCTTCCTTGGATATCTTCATGGATAAGCCTGTGTCTGTGGACAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATTTGGCAGTGCACGGATaGTCAGTGCCCTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANLAVHG*SVPFQE
Trigger: TTCCTGGAAGGGCACTGACCATCCGTGCACTGCCAA...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTAGCTCTCTGGGTTATTaGCAGTGCACGGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVSSLGY*QCTDGQ
Trigger: CTGACCATCCGTGCACTGCCAATAACCCAGAGAGCT...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATAACGGAGCAGCTCTCTaGGTTATTGGCAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANNGAAL*VIGSAR
Trigger: CCGTGCACTGCCAATAACCCAGAGAGCTGCTCCGTT...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp CATGCAGGTTTAGGATGGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGAGGGTGCAATATCCATaGCGCTCTTTAGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: HAGLGWVALPSPSQNKHQRVQYP*RSLVLP
Trigger: AGGAAGTACTAAAGAGCGCCATGGATATTGCACCCT...CTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTAGCAGCCATCATTTTTaGCCAAATGGAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVSSHHF*PNGAGP
Trigger: AGGCCCTGCTCCATTTGGCCAAAAATGATGGCTGCT...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CAA 72 bp CGAGAAAAACAGACACTGCCTACTGGATCACATGCGTaGTCAGAGAGGGCACTCTACGCTTTTAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: REKQTLPTGSHA*SERALYAFRGR
Trigger: TCTACCTCTAAAAGCGTAGAGTGCCCTCTCTGACAACGCATGTGATCCAGTAGGCAGTGTCTGTTTTTCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CAA 72 bp TTAACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTaGTGGTACCTCTCCTCCCTATTTGGCTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: LTTQPGSKFKMN*WYLSSLFGWNS
Trigger: GGAGTTCCAGCCAAATAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp ACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTTGTGGTACCTCTCCTCCCTAATCCAGAATGGCAGTTaGGAAGTCCAGTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: TTQPGSKFKMNLWYLSSLIQNGS*EVQSVE
Trigger: TTCAACAGACTGGACTTCTCAACTGCCATTCTGGAT...TAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATTGTTGCAGTAACTGCTaGGGTCGCTCACGAAACTGC +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANCCSNC*GRSRNC
Trigger: GCAGTTTCGTGAGCGACCTCAGCAGTTACTGCAACA...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR TCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTACTGGAACTCCAGCCTTaGTTTTTAATCACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLLELQP*FLITFA
Trigger: TGCAAAGGTGATTAAAAATCAAGGCTGGAGTTCCAG...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACCCAGAGCTCTCTCAGTaGTGGCACACCCAACTCCAC +
Preference number: 4 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYPELSQ*WHTQLH
Trigger: GTGGAGTTGGGTGTGCCATCACTGAGAGAGCTCTGG...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGTTAGACCAGCAGTTCTaGGACAGGGATTATTTGCTT +
Preference number: 4 (lower is better)
Translates to: ESRGEETPASESQFLGSKLDQQF*DRDYLL
Trigger: AAGCAAATAATCCCTGTCTCAGAACTGCTGGTCTAA...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTCAGCAGACAAAGTCATaGATATCATGGCCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSQQTKS*ISWPLA
Trigger: AGCAAGGGGCCATGATATTCATGACTTTGTCTGCTG...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCCCGTCGCTCAGCCTCTaGATGATGTTCAGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLPSLSL*MMFSCR
Trigger: CCTACAACTGAACATCATGCAGAGGCTGAGCGACGG...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTTTCCCAGTCAGCAACTaGATTTCTCCCCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSFPVSN*ISPLQC
Trigger: ACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAA...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTATCTCCTTGTCCCAAATaGAAGGGTTTACTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLSPCPK*KGLLSR
Trigger: TCTTGAGAGTAAACCCTTGCATTTGGGACAAGGAGA...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATTGCCGCTCGGAGAAGTaGTACTGGCAGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANCRSEK*YWQSFF
Trigger: GAAGAAACTCTGCCAGTACCACTTCTCCGAGCGGCA...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTAAAGTTGATAAAGTCCTaGGGTGAAAGTGAAACGGAG +
Preference number: 4 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLKLIKS*GESETE
Trigger: CTCCGTTTCACTTTCACCCCAGGACTTTATCAACTT...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTACAGACACTGCCTACTaGATCACATGCGTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVTDTAY*ITCVVR
Trigger: TCTGACAACGCATGTGATCCAGTAGGCAGTGTCTGT...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp CATGCAGGTTTAGGATGGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGAGGAACATGTGCTTTTaGGTTGTTCTGGTGAACAGA +
Preference number: 4 (lower is better)
Translates to: HAGLGWVALPSPSQNKHQRNMCF*VVLVNR
Trigger: TCTGTTCACCAGAACAACCCAAAAGCACATGTTCCT...CTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTAAGAATGAACATCCGCTaGGCTAGAAATGCACTGAAT +
Preference number: 4 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLRMNIR*ARNALN
Trigger: ATTCAGTGCATTTCTAGCCCAGCGGATGTTCATTCT...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATCAGTGTTTGCAGAGCTaGAGGGTATCTCCATACTGC +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANQCLQS*RVSPYC
Trigger: GCAGTATGGAGATACCCTTCAGCTCTGCAAACACTG...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR TCA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGTCCATGACTTATCTCTaGAGTTTCGAGCCAATGTTT +
Preference number: 4 (lower is better)
Translates to: ESRGEETPASESQFLGSKSMTYL*SFEPMF
Trigger: AAACATTGGCTCGAAACTTCAGAGATAAGTCATGGA...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTTCCACAGTTACCTGCTaGTATTTGCCTCGTAAGATC +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVSTVTC*YLPRKI
Trigger: GATCTTACGAGGCAAATATCAGCAGGTAACTGTGGA...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCATGTTGTTCAGCTGCTaGTGCCAGTGGAGAATCGTC +
Preference number: 4 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLMLFSC*CQWRIV
Trigger: GACGATTCTCCACTGGCAGCAGCAGCTGAACAACAT...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTACAGAATTAATCGTTTaGGGATCTGCCGCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVTELIV*GSAARR
Trigger: TCTCCGAGCGGCAGATCCGCAAACGATTAATTCTGT...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGTTCATTTCTGCCATTTaGCCTCCCATTCAACTGATT +
Preference number: 4 (lower is better)
Translates to: ESRGEETPASESQFLGSKFISAI*PPIQLI
Trigger: AATCAGTTGAATGGGAGGGCAAATGGCAGAAATGAA...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTGACTTGCCGACTCTTTaGACCAGTGTACATAAGGAT +
Preference number: 4 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSDLPTL*TSVHKD
Trigger: ATCCTTATGTACACTGGTCCAAAGAGTCGGCAAGTC...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp ACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTTGTGGTACCTCTCCTCCCTAACAACATCTCTGTATTaGCCTACAGGTTCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: TTQPGSKFKMNLWYLSSLTTSLY*PTGSEC
Trigger: ACACTCTGAACCTGTAGGCCAATACAGAGATGTTGT...TAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATGGAGTTTCCATTCTTTaGAAAACCAAAGATGGTTAC +
Preference number: 4 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHGVSIL*KTKDGY
Trigger: GTAACCATCTTTGGTTTTCCAAAGAATGGAAACTCC...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCGCAGGGGGACCCTTCTaGAGTGTTGTCATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLAGGPF*SVVMCW
Trigger: CCAGCACATGACAACACTTCAGAAGGGTCCCCCTGC...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR TCA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTCCAATGTCCTCTCCATaGCTTATCTCTGAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVPMSSP*LISEVS
Trigger: CGAAACTTCAGAGATAAGTCATGGAGAGGACATTGG...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR TCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTTTTGGGTTGTTCTGGTaGACAGATAACTCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVFGLFW*TDNSKE
Trigger: CTCCTTAGAGTTATCTGTTCACCAGAACAACCCAAA...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTAATTCTCCTCTTCCAATaGAAGAGAACCATAAAGGTT +
Preference number: 4 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLILLFQ*KRTIKV
Trigger: AACCTTTATGGTTCTCTTTCATTGGAAGAGGAGAAT...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCACAGAATTAATCGTTTaGGGATCTGCCGCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLTELIV*GSAARR
Trigger: TCTCCGAGCGGCAGATCCGCAAACGATTAATTCTGT...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTTTCTTCCAATCCAGCTaGCCTTTGTCTGACAGAATT +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVFFQSS*PLSDRI
Trigger: AATTCTGTCAGACAAAGGGCAGCTGGATTGGAAGAA...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGGATGTGACAGTGTTTaGAGAGCTGAAGGGTATCTC +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANGCDSV*RAEGYL
Trigger: GAGATACCCTTCAGCTCTGCAAACACTGTCACATCC...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCTTCCCAGTCAGCAACTaGATTTCTCCCCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLFPVSN*ISPLQC
Trigger: ACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAA...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACAAGCTTCCCCCAGGGTaGAATATCCATGGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYKLPPG*NIHGAL
Trigger: AAGAGCGCCATGGATATTGCACCCTGGGGGAAGCTT...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACGCCTACTGGATCACATaGGTTGTCAGAGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYAYWIT*VVREGT
Trigger: AGTGCCCTCTCTGACAACGCATGTGATCCAGTAGGC...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTGGGCAGAGGTCATCTTaGACAGATGCACATGGTTGC +
Preference number: 4 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIIGQRSS*TDAHGC
Trigger: GCAACCATGTGCATCTGTGCAAGATGACCTCTGCCC...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTACGTTAACAGCCACATaGCCAATGCTGGGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIITLTAT*PMLGSL
Trigger: GAGACTGCCCAGCATTGGGCATGTGGCTGTTAACGT...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp CACTCTGTCCACAGACACAGGCTTATCCATGAAGATATCCAAGGAAGGAAGTTCTTCTGGAATCCAGAATaGCAGTTGAGAAGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: HSVHRHRLIHEDIQGRKFFWNPE*QLRSPV
Trigger: GACTGGACTTCTCAACTGCCATTCTGGATTCCAGAA...GAACTTCCTTCCTTGGATATCTTCATGGATAAGCCTGTGTCTGTGGACAGAGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp GACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCATTCCCATTGGCAGTGCACGGATaGTCAGTGCCCTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DNYRRSSFLFSSLGPAFPLAVHG*SVPFQE
Trigger: TTCCTGGAAGGGCACTGACCATCCGTGCACTGCCAA...TGGGAATGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACGCAGAGATCACCAGTTaGTGGCAACATGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYAEITS*WQHVEG
Trigger: GCCTTCCACATGTTGCCACCAACTGGTGATCTCTGC...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTATGCACATGGTTGCCTaGAGTCTATCGTACAATCAT +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVMHMVA*SLSYNH
Trigger: ATGATTGTACGATAGACTCCAGGCAACCATGTGCAT...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp CTGAGAAATTGGAGAGAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCACACCAAAAGGTGCTTaGGGTGGAGGGCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LRNWREPDNYRRSSFLFSTPKGA*GGGLGA
Trigger: TGCCCCCAGCCCTCCACCCCAAGCACCTTTTGGTGT...GCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTCTCTCCAATTTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGTGTGAAAACATTAAGTaGCTCCTTAACTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ESRGEETPASESQFLGSKCENIK*LLNFSS
Trigger: ACTGGAGAAGTTAAGGAGCCACTTAATGTTTTCACA...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATATCCAGAATGGCAGTTaGGAAGTCCAGTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANIQNGS*EVQSVE
Trigger: TTCAACAGACTGGACTTCTCAACTGCCATTCTGGAT...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR TCA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTTGCCACTCAGGGATGTaGGCTGTGACTTTGCTATCA +
Preference number: 4 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIICHSGM*AVTLLS
Trigger: TGATAGCAAAGTCACAGCTCACATCCCTGAGTGGCA...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTCTCCATTTTCACCGCTaGAATAGAATTATTGCCCTT +
Preference number: 4 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSLHFHR*NRIIAL
Trigger: AAGGGCAATAATTCTATTTCAGCGGTGAAAATGGAG...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTATAAGAGAGTTTCTGTaGCCATTAAGAGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVIREFL*PLRGLH
Trigger: ATGGAGTCCTCTTAATGGTCACAGAAACTCTCTTAT...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp ACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTTGTGGTACCTCTCCTCCCTACAGCTATTGATTGGGTaGCCAATTCTATCATCTTTT +
Preference number: 4 (lower is better)
Translates to: TTQPGSKFKMNLWYLSSLQLLIG*PILSSF
Trigger: AAAAGATGATAGAATTGGTCACCCAATCAATAGCTG...TAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp CACTCTGTCCACAGACACAGGCTTATCCATGAAGATATCCAAGGAAGGAAGTTCTTCTCTTCAGAAAGCTaGTATGTGGGTTGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: HSVHRHRLIHEDIQGRKFFSSES*YVGCVL
Trigger: TAGCACACAACCCACATATCAGCTTTCTGAAGAGAA...GAACTTCCTTCCTTGGATATCTTCATGGATAAGCCTGTGTCTGTGGACAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp CACTCTGTCCACAGACACAGGCTTATCCATGAAGATATCCAAGGAAGGAAGTTCCTGCCCATAAACCTTTaGGTTGGACCAAATCTTAAC +
Preference number: 4 (lower is better)
Translates to: HSVHRHRLIHEDIQGRKFLPINL*VGPNLN
Trigger: GTTAAGATTTGGTCCAACTCAAAGGTTTATGGGCAG...GAACTTCCTTCCTTGGATATCTTCATGGATAAGCCTGTGTCTGTGGACAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTGAAAGCTTTGTTTGCTaGGTGAATTCAAGGACACTT +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVESFVC*VNSRTL
Trigger: AAGTGTCCTTGAATTCACTCAGCAAACAAAGCTTTC...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCGACCAGCACAGACTTaGCGACTCTTTGGACCAGTG +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLRPAQT*RLFGPV
Trigger: CACTGGTCCAAAGAGTCGGCAAGTCTGTGCTGGTCG...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp GACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCATTCCCATTGTTCAGCTGCTGCTaGCAGTGGAGAATCGTCTCC +
Preference number: 4 (lower is better)
Translates to: DNYRRSSFLFSSLGPAFPLFSCC*QWRIVS
Trigger: GGAGACGATTCTCCACTGGCAGCAGCAGCTGAACAA...TGGGAATGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp GAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCAAATCGTTTGCGGATCTaGCGCTCGGAGAAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: EPDNYRRSSFLFSSLGPANRLRI*RSEKWY
Trigger: GTACCACTTCTCCGAGCGGCAGATCCGCAAACGATT...TGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATTTACCTGCTGATATTTaGCTCGTAAGATCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANLPADI*LVRSPW
Trigger: CCAAGGGGATCTTACGAGGCAAATATCAGCAGGTAA...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp ACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTTGTGGTACCTCTCCTCCCTACTGATACATTGGGGATaGTTTCACCTAATAGCTTTT +
Preference number: 4 (lower is better)
Translates to: TTQPGSKFKMNLWYLSSLLIHWG*FHLIAF
Trigger: AAAAGCTATTAGGTGAAAGCATCCCCAATGTATCAG...TAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTTTGTACTCACTGGAATaGCACATTCACAACAGAATC +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVLYSLE*HIHNRI
Trigger: GATTCTGTTGTGAATGTGGCATTCCAGTGAGTACAA...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp CATGCAGGTTTAGGATGGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGGGAATAATCCCCCTTTaGTTAGTAAAAGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: HAGLGWVALPSPSQNKHQGIIPL*LVKDEV
Trigger: AACTTCATCTTTTACTAAGCAAAGGGGGATTATTCC...CTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCTTCTGGAATCCAGAATaGCAGTTGAGAAGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLFWNPE*QLRSPV
Trigger: GACTGGACTTCTCAACTGCCATTCTGGATTCCAGAA...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCAGGGTGCAATATCCATaGCGCTCTTTAGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLRVQYP*RSLVLP
Trigger: AGGAAGTACTAAAGAGCGCCATGGATATTGCACCCT...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATTCCTCCCTATTTGGCTaGAACTCCAGCCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANSSLFG*NSSLDF
Trigger: AAAATCAAGGCTGGAGTTCCAGCCAAATAGGGAGGA...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTAAACTGGAGAAATTCTaGCGTAGCACAAACATTGCA +
Preference number: 4 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVKLEKF*RSTNIA
Trigger: TGCAATGTTTGTGCTACGCCAGAATTTCTCCAGTTT...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTAGAAGTTCAGAGTTTTaGAGCAGCCATCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSRSSEF*SSHHFW
Trigger: CCAAAAATGATGGCTGCTCCAAAACTCTGAACTTCT...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CAA 72 bp TCTAGTGTGAGCACTCCTGAACTTCACATATTCTCCTaGTCCCAAATGCAAGGGTTTACTCTCAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: SSVSTPELHIFS*SQMQGFTLKRL
Trigger: GAGTCTCTTGAGAGTAAACCCTTGCATTTGGGACAAGGAGAATATGTGAAGTTCAGGAGTGCTCACACTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CAA 72 bp CAAGTGCTAGTAGAACCTGCTCTAGTGTTCAGAGTTTaGCAGTACAAACCCAGTCCCTCTGAAATACGTCTT +
Preference number: 4 (lower is better)
Translates to: QVLVEPALVFRV*QYKPSPSEIRL
Trigger: AAGACGTATTTCAGAGGGACTGGGTTTGTACTGCAAAACTCTGAACACTAGAGCAGGTTCTACTAGCACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTAAGAAGTCCAGTCTGTTaGAAGCTTCCCCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLRSPVC*KLPPGC
Trigger: GCACCCTGGGGGAAGCTTTCAACAGACTGGACTTCT...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCGCTCAGCCTCTGCATaGTGTTCAGTTGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLRSASA*CSVVGT
Trigger: TGTGCCTACAACTGAACATCATGCAGAGGCTGAGCG...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR TCA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTTCTTGGTGGAAATACTaGGTTTTGGTTTTGCTATTC +
Preference number: 4 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSSWWKY*VLVLLF
Trigger: GAATAGCAAAACCAAAACTCAGTATTTCCACCAAGA...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp GACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCATTCCCACCTGCATTCCCAATGTaGAATTGGTTCAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: DNYRRSSFLFSSLGPAFPPAFPM*NWFRGR
Trigger: TCTCCCCCTGAACCAATTTCACATTGGGAATGCAGG...TGGGAATGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCAATCGTTTGCGGATCTaGCGCTCGGAGAAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLNRLRI*RSEKWY
Trigger: GTACCACTTCTCCGAGCGGCAGATCCGCAAACGATT...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCAAGCTTCCCCCAGGGTaGAATATCCATGGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLKLPPG*NIHGAL
Trigger: AAGAGCGCCATGGATATTGCACCCTGGGGGAAGCTT...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp GAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCACAATGTTTCTGCGACTaGAAACCTGAAGGCGACGAG +
Preference number: 4 (lower is better)
Translates to: EPDNYRRSSFLFSSLGPAQCFCD*KPEGDE
Trigger: CTCGTCGCCTTCAGGTTTGCAGTCGCAGAAACATTG...TGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTAGTGCTAGTAGAACCTaGTCTAGTGTTCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVSASRT*SSVQSF
Trigger: AAAACTCTGAACACTAGAGCAGGTTCTACTAGCACT...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp CACTCTGTCCACAGACACAGGCTTATCCATGAAGATATCCAAGGAAGGAAGTTCATACTGCTCTTTCCTTaGGTAACATCGGACAAGTTT +
Preference number: 4 (lower is better)
Translates to: HSVHRHRLIHEDIQGRKFILLFP*VTSDKF
Trigger: AAACTTGTCCGATGTTACCCAAGGAAAGAGCAGTAT...GAACTTCCTTCCTTGGATATCTTCATGGATAAGCCTGTGTCTGTGGACAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATAAGTTGATAAAGTCCTaGGGTGAAAGTGAAACGGAG +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANKLIKS*GESETE
Trigger: CTCCGTTTCACTTTCACCCCAGGACTTTATCAACTT...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
3UTR CAA 72 bp ACCTTTGCAAAAAGCCCTAGCTCAGATGGACTCATTTaGATGTTGGACCTAAAGAAAAGAAGCTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TFAKSPSSDGLI*MLDLKKRSSSA
Trigger: AGCTGAGGAGCTTCTTTTCTTTAGGTCCAACATCAAAATGAGTCCATCTGAGCTAGGGCTTTTTGCAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCAGTGTTTGCAGAGCTaGAGGGTATCTCCATACTGC +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLQCLQS*RVSPYC
Trigger: GCAGTATGGAGATACCCTTCAGCTCTGCAAACACTG...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR TCA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTCATAGTTCAGGCTGTTaGAAAGATTCTCCTTATTGT +
Preference number: 4 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVHSSGC*KDSPYC
Trigger: ACAATAAGGAGAATCTTTTCAACAGCCTGAACTATG...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR TCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATACATGTGGAAGGCCATaGACCCCTAAATCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANTCGRP*TPKSKN
Trigger: ATTTTTAGATTTAGGGGTTCATGGCCTTCCACATGT...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTAGTCCCAGTTTTGTGCTaGCAGTCCACAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLVPVLC*QSTAGN
Trigger: ATTGCCTGCTGTGGACTGTCAGCACAAAACTGGGAC...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTATGGGAAAGGGTATGTaGATCCACAAAGACGAGAAC +
Preference number: 4 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIIMGKGM*IHKDEN
Trigger: GTTCTCGTCTTTGTGGATTCACATACCCTTTCCCAT...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTGAGAAAAACAGACACTaGCTACTGGATCACATGCGT +
Preference number: 4 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIIEKNRH*LLDHMR
Trigger: ACGCATGTGATCCAGTAGGCAGTGTCTGTTTTTCTC...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp GAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCAAAGGAGGGCCCTGTTTaGCTGAAAAGGAAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: EPDNYRRSSFLFSSLGPAKEGPV*LKRKCE
Trigger: TTCACACTTCCTTTTCAGGCAAACAGGGCCCTCCTT...TGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTAACACAGATATGTTGTaGCTGCTGTGCTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIINTDML*LLCSSH
Trigger: ATGGGAAGAGCACAGCAGGCACAACATATCTGTGTT...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp CTGAGAAATTGGAGAGAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCCACCCGCTACCTTACTaGCCAAGTGCTAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: LRNWREPDNYRRSSFLFSHPLPY*PSASRT
Trigger: GGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTG...GCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTCTCTCCAATTTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACTTCATGAAGTTCTTTTaGGCGATGCCACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYFMKFF*AMPLRD
Trigger: ATCCCTGAGTGGCATCGCCCAAAAGAACTTCATGAA...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCTCGGAGAAGTGGTACTaGCAGAGTTTCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLSEKWY*QSFFHS
Trigger: GCTGTGGAAGAAACTCTGCCAGTACCACTTCTCCGA...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCATACTGCTCTTTCCTTaGGTAACATCGGACAAGTTT +
Preference number: 4 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLILLFP*VTSDKF
Trigger: AAACTTGTCCGATGTTACCCAAGGAAAGAGCAGTAT...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCAGTGTTGTCATGTGCTaGGATTCAGAACTTGAACAA +
Preference number: 4 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLSVVMC*DSELEQ
Trigger: TTGTTCAAGTTCTGAATCCCAGCACATGACAACACT...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATCCTTCTTTCTCTTCTTaGCTGCAACATCATAGTTCA +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANPSFSS*LQHHSS
Trigger: TGAACTATGATGTTGCAGCCAAGAAGAGAAAGAAGG...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTTTCACAGCTATTGATTaGGTGACCAATTCTATCATC +
Preference number: 4 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVFTAID*VTNSII
Trigger: GATGATAGAATTGGTCACCCAATCAATAGCTGTGAA...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTGCAGGTTGTACTCACTaGAATGCCACATTCACAACA +
Preference number: 4 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIIAGCTH*NATFTT
Trigger: TGTTGTGAATGTGGCATTCCAGTGAGTACAACCTGC...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATCATAGTTCAGGCTGTTaGAAAGATTCTCCTTATTGT +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANHSSGC*KDSPYC
Trigger: ACAATAAGGAGAATCTTTTCAACAGCCTGAACTATG...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR TCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATTCTTGGTGGAAATACTaGGTTTTGGTTTTGCTATTC +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANSWWKY*VLVLLF
Trigger: GAATAGCAAAACCAAAACTCAGTATTTCCACCAAGA...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCGGATGTGACAGTGTTTaGAGAGCTGAAGGGTATCTC +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLGCDSV*RAEGYL
Trigger: GAGATACCCTTCAGCTCTGCAAACACTGTCACATCC...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR GCA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTACCTCGTTTCTCTCCATaGTTAGCCATCTTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLPRFSP*LAIFPP
Trigger: AGGGGGAAAGATGGCTAAGCATGGAGAGAAACGAGG...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACGGACACTTTGAAAAATaGCCAGCAGACAAAGTCATG +
Preference number: 4 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYGHFEK*PADKVM
Trigger: CATGACTTTGTCTGCTGGGCATTTTTCAAAGTGTCC...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATAGTCTAATGTTTTGCTaGTCTTCAAGGACTTTCAGT +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANSLMFC*SSRTFS
Trigger: ACTGAAAGTCCTTGAAGACCAGCAAAACATTAGACT...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACCTCGTAAGATCCCCTTaGGATCTTCCTGTTTTAACT +
Preference number: 4 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYLVRSP*DLPVLT
Trigger: AGTTAAAACAGGAAGATCCCAAGGGGATCTTACGAG...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATAGGAAGCTGAGAAATTaGAGAGAACCTGACAATTAT +
Preference number: 4 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANRKLRN*REPDNY
Trigger: ATAATTGTCAGGTTCTCTCCAATTTCTCAGCTTCCT...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp CTGAGAAATTGGAGAGAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCGAGATCACCAGTTGGTaGCAACATGTGGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LRNWREPDNYRRSSFLFSEITSW*QHVEGH
Trigger: ATGGCCTTCCACATGTTGCCACCAACTGGTGATCTC...GCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTCTCTCCAATTTCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp GAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCAGAAGCAAGTTTAAGATaGACTTGTGGTACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EPDNYRRSSFLFSSLGPAEASLR*TCGTSP
Trigger: AGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTC...TGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCACTGTTCCTCAACTTaGATGTGGACTGTGTTCCTA +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLHCSST*MWTVFL
Trigger: TAGGAACACAGTCCACATTCAAGTTGAGGAACAGTG...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCATTAGTCTAATGTTTTaGTGGTCTTCAAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLISLMF*WSSRTF
Trigger: GAAAGTCCTTGAAGACCAGCAAAACATTAGACTAAT...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACCTGTGTTCCTATTTCTaGTTCACTTATTTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYLCSYF*FTYLPR
Trigger: CCTTGGCAAATAAGTGAAGCAGAAATAGGAACACAG...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCAGCAGTCTAGGTCCTaGATTCCCAATGTGAAATTG +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLQQSRS*IPNVKL
Trigger: CAATTTCACATTGGGAATGCAGGACCTAGACTGCTG...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp CTGAGAAATTGGAGAGAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCGGGAGAGGAAACACCTaGTTCGGAATCTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LRNWREPDNYRRSSFLFSGRGNT*FGISVS
Trigger: AGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCC...GCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTCTCTCCAATTTCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTAGTGTTGTCATGTGCTaGGATTCAGAACTTGAACAA +
Preference number: 4 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIISVVMC*DSELEQ
Trigger: TTGTTCAAGTTCTGAATCCCAGCACATGACAACACT...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACCCTTCTTTCTCTTCTTaGCTGCAACATCATAGTTCA +
Preference number: 4 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYPSFSS*LQHHSS
Trigger: TGAACTATGATGTTGCAGCCAAGAAGAGAAAGAAGG...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTACAGCAGGACTTCCTCTaGGACGGCTTTTGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLQQDFL*DGFCFV
Trigger: AACAAAACAAAAGCCGTCCCAGAGGAAGTCCTGCTG...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CAA 72 bp CCTGTTTGCCTGAAAAGGAAGTGTGAAACCAGAGGATaGCCTCCAATATCCCTTTCCATTTTAAATCACTTT +
Preference number: 4 (lower is better)
Translates to: PVCLKRKCETRG*PPISLSILNHF
Trigger: AAAGTGATTTAAAATGGAAAGGGATATTGGAGGCAATCCTCTGGTTTCACACTTCCTTTTCAGGCAAACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCAAGGGCATGCAGGGTaGCAAGTTTATTTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLQGHAG*QVYLEK
Trigger: TTTTTCCAAATAAACTTGTCACCCTGCATGCCCTTG...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCTGTTGAACATCTCCTaGATGGTTTGCCTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLLLNIS*MVCLLV
Trigger: TACAAGAAGGCAAACCATTCAGGAGATGTTCAACAG...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTAGAATGATACACTGTTaGACATCTCCTGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIIRMIHC*TSPEWF
Trigger: AAACCATTCAGGAGATGTTCAACAGTGTATCATTCT...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp GAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCAGCTTTGTTTGCTGAGTaGATTCAAGGACACTTTGAA +
Preference number: 4 (lower is better)
Translates to: EPDNYRRSSFLFSSLGPAALFAE*IQGHFE
Trigger: TTCAAAGTGTCCTTGAATTCACTCAGCAAACAAAGC...TGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCTTCTTCCAATCCAGCTaGCCTTTGTCTGACAGAATT +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLFFQSS*PLSDRI
Trigger: AATTCTGTCAGACAAAGGGCAGCTGGATTGGAAGAA...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp GACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCATTCCCATCAGGTTGTCTGGGATaGTTTGCCAATAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: DNYRRSSFLFSSLGPAFPSGCLG*FANRNS
Trigger: AGAATTTCTATTGGCAAACCATCCCAGACAACCTGA...TGGGAATGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
3UTR CAA 72 bp TTGTCAAAATATGCTGCTTTCTTTATAGCAAGCAGGTaGTACTCACTGGAATGCCACATTCACAACAGAATC +
Preference number: 4 (lower is better)
Translates to: LSKYAAFFIASR*YSLECHIHNRI
Trigger: GATTCTGTTGTGAATGTGGCATTCCAGTGAGTACAACCTGCTTGCTATAAAGAAAGCAGCATATTTTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCTCCATGACTTATCTCTaGAGTTTCGAGCCAATGTTT +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLSMTYL*SFEPMF
Trigger: AAACATTGGCTCGAAACTTCAGAGATAAGTCATGGA...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR TCA 90 bp CTGAGAAATTGGAGAGAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCGAACTCATTAGGTCCTaGGATTTCCTTTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: LRNWREPDNYRRSSFLFSELIRS*DFLSST
Trigger: TGTGGAAGAAAGGAAATCTCAGGACCTAATGAGTTC...GCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTCTCTCCAATTTCTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp GAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCAACTGAGTTTTGGTTTTaGTATTCAGCATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EPDNYRRSSFLFSSLGPATEFWF*YSACPS
Trigger: AGAAGGACATGCTGAATAGCAAAACCAAAACTCAGT...TGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp GAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCATATCGTACAATCATGTaGACTGCTGACAGTCTAAAT +
Preference number: 4 (lower is better)
Translates to: EPDNYRRSSFLFSSLGPAYRTIM*TADSLN
Trigger: ATTTAGACTGTCAGCAGTGCACATGATTGTACGATA...TGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTAATAGCAAGACATTATTaGCCTTCAGCCTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLIARHY*PSAWQK
Trigger: TTTCTGCCAGGCTGAAGGGCAATAATGTCTTGCTAT...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCTTATATGTGAGGCTCTaGCCATACTTAACAGATACC +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLLYVRL*PYLTDT
Trigger: GGTATCTGTTAAGTATGGCCAGAGCCTCACATATAA...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR TCA 90 bp CTGAGAAATTGGAGAGAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAAATCATCTCACAACTaGTACATTGGGGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: LRNWREPDNYRRSSFLFSKSSHN*YIGDAF
Trigger: GAAAGCATCCCCAATGTATCAGTTGTGAGATGATTT...GCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTCTCTCCAATTTCTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR GCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCACTGAGTTTTGGTTTTaGTATTCAGCATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLTEFWF*YSACPS
Trigger: AGAAGGACATGCTGAATAGCAAAACCAAAACTCAGT...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CCA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCTCACAACTGATACATTaGGGATGCTTTCACCTAATA +
Preference number: 4 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLSQLIH*GCFHLI
Trigger: TATTAGGTGAAAGCATCCCCAATGTATCAGTTGTGA...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CCA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTATATTGCCCTTCAGCCTaGCAGAAAAACATAAACTCA +
Preference number: 4 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLYCPSA*QKNINS
Trigger: TGAGTTTATGTTTTTCTGCCAGGCTGAAGGGCAATA...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS GCA 90 bp GCAGCCTGGCCCAGGCTGACCAGGTCCCGCCCGTCGCTCAGCCTCTaGATGATGTTCAGTTGTAGGCACAAAGGCAGGTCAGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: AAWPRLTRSRPSLSL*MMFSCRHKGRSVKV
Trigger: CACCTTCACTGACCTGCCTTTGTGCCTACAACTGAACATCATGCAGAGGCTGAGCGACGGGCGGGACCTGGTCAGCCTGGGCCAGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS-3UTR CAA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGGAGAAGTCCAGTCTGTaGAAAGCTTCCCCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ESRGEETPASESQFLGSKEKSSL*KASPRV
Trigger: CACCCTGGGGGAAGCTTTCAACAGACTGGACTTCTC...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATACTGGATCACATGCGTaGTCAGAGAGGGCACTCTAC +
Preference number: 5 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHTGSHA*SERALY
Trigger: GTAGAGTGCCCTCTCTGACAACGCATGTGATCCAGT...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp CATGCAGGTTTAGGATGGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGACCTCTCCTCCCTATTaGGCTGGAACTCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: HAGLGWVALPSPSQNKHQTSPPY*AGTPAL
Trigger: CAAGGCTGGAGTTCCAGCCAAATAGGGAGGAGAGGT...CTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGAGTTCGCATTCAGCTTaGCCACTGTACCAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: ESRGEETPASESQFLGSKSSHSA*PLYQVG
Trigger: GCCCACCTGGTACAGTGGCAAAGCTGAATGCGAACT...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp AATACACACCCGCTACCTTACTGCCCAAGTGCTAGTAGAACCTGCTCTAGTGTTCCGACCAGCACAGACTaGCCGACTCTTTGGACCAGT +
Preference number: 5 (lower is better)
Translates to: NTHPLPYCPSASRTCSSVPTSTD*PTLWTS
Trigger: ACTGGTCCAAAGAGTCGGCAAGTCTGTGCTGGTCGG...AACACTAGAGCAGGTTCTACTAGCACTTGGGCAGTAAGGTAGCGGGTGTGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTGAATATCATGGCCCCTaGCTCCTGGCTGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSEYHGP*LLAASW
Trigger: CCATGAGGCAGCCAGGAGCAAGGGGCCATGATATTC...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS TCA 90 bp GGCCCGGACCACGTAGTTAAATCTTCTGGAATCCAGAATGGCAGTTaGGAAGTCCAGTCTGTTGAAAGCTTCCCCCAGGGTGCAATATCC +
Preference number: 5 (lower is better)
Translates to: GPDHVVKSSGIQNGS*EVQSVESFPQGAIS
Trigger: GGATATTGCACCCTGGGGGAAGCTTTCAACAGACTGGACTTCTCAACTGCCATTCTGGATTCCAGAAGATTTAACTACGTGGTCCGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520511.1
CDS-3UTR CAA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTAGACCCTTCTGAAGTGTaGTCATGTGCTGGGATTCAG +
Preference number: 5 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLDPSEV*SCAGIQ
Trigger: CTGAATCCCAGCACATGACAACACTTCAGAAGGGTC...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGCTCCACCCCATGTCTTaGAGGAAGCTGAGAAATTGG +
Preference number: 5 (lower is better)
Translates to: ESRGEETPASESQFLGSKLHPMS*RKLRNW
Trigger: CCAATTTCTCAGCTTCCTCAAAGACATGGGGTGGAG...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATGGAGTTTCTACTTTCTaGATCAGCATGAAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHGVSTF*ISMKGQ
Trigger: CTGCCCCTTCATGCTGATCAAGAAAGTAGAAACTCC...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS TCA 90 bp CAGCCGGACCACGTAGTTAAATCTTCTGGAATCCAGAATGGCAGTTaGGAAGTCCAGTCTGTTGAAAGCTTCCCCCAGGGTGCAATATCC +
Preference number: 5 (lower is better)
Translates to: QPDHVVKSSGIQNGS*EVQSVESFPQGAIS
Trigger: GGATATTGCACCCTGGGGGAAGCTTTCAACAGACTGGACTTCTCAACTGCCATTCTGGATTCCAGAAGATTTAACTACGTGGTCCGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287396.2
ENST00000517956.5
ENST00000521719.5
CDS TCA 90 bp AGGCCGGACCACGTAGTTAAATCTTCTGGAATCCAGAATGGCAGTTaGGAAGTCCAGTCTGTTGAAAGCTTCCCCCAGGGTGCAATATCC +
Preference number: 5 (lower is better)
Translates to: RPDHVVKSSGIQNGS*EVQSVESFPQGAIS
Trigger: GGATATTGCACCCTGGGGGAAGCTTTCAACAGACTGGACTTCTCAACTGCCATTCTGGATTCCAGAAGATTTAACTACGTGGTCCGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443022.2
CDS-3UTR CAA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTATGTGAAACCAGAGGATaGCCTCCAATATCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLCETRG*PPISLS
Trigger: GGAAAGGGATATTGGAGGCAATCCTCTGGTTTCACA...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTAACATCCCTGTGGATTaGCTCATACTGCCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSNIPVD*LILPWA
Trigger: TGCCCAGGGCAGTATGAGCAAATCCACAGGGATGTT...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTACTAGTGTTCAGAGTTTaGCAGTACAAACCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLLVFRV*QYKPSP
Trigger: GGGACTGGGTTTGTACTGCAAAACTCTGAACACTAG...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS TCA 90 bp CCAAATGCCATATTCCCAGCTCTCCAGTCAGCAGGGGGACCCTTCTaGAGTGTTGTCATGTGCTGGGATTCAGAACTTGAACAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: PNAIFPALQSAGGPF*SVVMCWDSELEQVD
Trigger: ATCAACTTGTTCAAGTTCTGAATCCCAGCACATGACAACACTTCAGAAGGGTCCCCCTGCTGACTGGAGAGCTGGGAATATGGCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS-3UTR CAA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCGAGAAGTCCAGTCTGTaGAAAGCTTCCCCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLEKSSL*KASPRV
Trigger: CACCCTGGGGGAAGCTTTCAACAGACTGGACTTCTC...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CAA 90 bp CATGCAGGTTTAGGATGGGTGGCGCTTCCTTCGCCTTCTCAAAACAAACACCAGCATACTGCTCTTTCCTaGGGTAACATCGGACAAGTT +
Preference number: 5 (lower is better)
Translates to: HAGLGWVALPSPSQNKHQHTALS*GNIGQV
Trigger: AACTTGTCCGATGTTACCCAAGGAAAGAGCAGTATG...CTGGTGTTTGTTTTGAGAAGGCGAAGGAAGCGCCACCCATCCTAAACCTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp ATTTCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGGCAGAGATCACCAGTaGGTGGCAACATGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: ISPLQCPLHDLSLKFRANGRDHQ*VATCGR
Trigger: CCTTCCACATGTTGCCACCAACTGGTGATCTCTGCC...ATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATTCCCATTCAACTGATTaGTCTGCTCAAAGTAACAGC +
Preference number: 5 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHSHSTD*SAQSNS
Trigger: GCTGTTACTTTGAGCAGACAAATCAGTTGAATGGGA...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp ACTACCCAGCCCGGAAGCAAGTTTAAGATGAACTTGTGGTACCTCTCCTCCCTACATAGCAAGACATTATaGCCCTTCAGCCTGGCAGAA +
Preference number: 5 (lower is better)
Translates to: TTQPGSKFKMNLWYLSSLHSKTL*PFSLAE
Trigger: TTCTGCCAGGCTGAAGGGCAATAATGTCTTGCTATG...TAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTTGCTTCCGGGCTGGGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS TCA 90 bp ATTCATGAAGTTCTTTTGGGCGATGCCACTCAGGGATGTGAGCTGTaGCTTTGCTATCAGCTCCAACAGCCGGACCACGTAGTTAAATCT +
Preference number: 5 (lower is better)
Translates to: IHEVLLGDATQGCEL*LCYQLQQPDHVVKS
Trigger: AGATTTAACTACGTGGTCCGGCTGTTGGAGCTGATAGCAAAGTCACAGCTCACATCCCTGAGTGGCATCGCCCAAAAGAACTTCATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287396.2
ENST00000517956.5
ENST00000521719.5
CDS-3UTR CAA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTGACCCTTCTGAAGTGTaGTCATGTGCTGGGATTCAG +
Preference number: 5 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVDPSEV*SCAGIQ
Trigger: CTGAATCCCAGCACATGACAACACTTCAGAAGGGTC...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CAA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTCCTCAGCTCATCCCCTaGGCAAGGGGTACAGCAACT +
Preference number: 5 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIIPQLIP*ARGTAT
Trigger: AGTTGCTGTACCCCTTGCCAAGGGGATGAGCTGAGG...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp TTCTCTTGGGGCAGAGGTCATCTTGCACAGATGCACATGGTTGCCTGGAGTCTAAAGTTTAAGATGAACTaGTGGTACCTCTCCTCCCTA +
Preference number: 5 (lower is better)
Translates to: FSWGRGHLAQMHMVAWSLKFKMN*WYLSSL
Trigger: TAGGGAGGAGAGGTACCACAAGTTCATCTTAAACTT...TAGACTCCAGGCAACCATGTGCATCTGTGCAAGATGACCTCTGCCCCAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp GAGTCTAGGGGAGAGGAAACACCTGCTTCGGAATCTCAGTTTCTAGGGAGCAAGCTCACAACTGATACATaGGGGATGCTTTCACCTAAT +
Preference number: 5 (lower is better)
Translates to: ESRGEETPASESQFLGSKLTTDT*GMLSPN
Trigger: ATTAGGTGAAAGCATCCCCAATGTATCAGTTGTGAG...CTTGCTCCCTAGAAACTGAGATTCCGAAGCAGGTGTTTCCTCTCCCCTAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATAAGAAGTTCAGAGTTTaGGAGCAGCCATCATTTTTG +
Preference number: 5 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHKKFRV*EQPSFL
Trigger: CAAAAATGATGGCTGCTCCAAAACTCTGAACTTCTT...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS GCA 90 bp ATGGCGCTGAACATGAAAACAAAGGCACAGAAGTTACTCCTGCCATaGAGAGGTCACCCAAGTAAGAATGAGCCAGTTAGAACAACCCAA +
Preference number: 5 (lower is better)
Translates to: MALNMKTKAQKLLLP*RGHPSKNEPVRTTQ
Trigger: TTGGGTTGTTCTAACTGGCTCATTCTTACTTGGGTGACCTCTGCATGGCAGGAGTAACTTCTGTGCCTTTGTTTTCATGTTCAGCGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287396.2
CDS CCA 90 bp TTGTCATGTGCTGGGATTCAGAACTTGAACAAGTTGATAAAGTCCTaGGGTGAAAGTGAAACGGAGCAGCTCTCTGGGTTATTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: LSCAGIQNLNKLIKS*GESETEQLSGLLAV
Trigger: CACTGCCAATAACCCAGAGAGCTGCTCCGTTTCACTTTCACCCCAGGACTTTATCAACTTGTTCAAGTTCTGAATCCCAGCACATGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS-3UTR CAA 90 bp TGCCCAGCAGACAAAGTCATGAATATCATGGCCCCTTGCTCCTGGCTGCCTCATAAAAGATTCTCCTTATaGTATACCTCCTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: CPADKVMNIMAPCSWLPHKRFSL*YTSLLQ
Trigger: CTGCAACAAGGAGGTATACAATAAGGAGAATCTTTT...ATGAGGCAGCCAGGAGCAAGGGGCCATGATATTCATGACTTTGTCTGCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTCAATCCAGCTGCCCTTaGTCTGACAGAATTAATCGT +
Preference number: 5 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVQSSCP*SDRINR
Trigger: ACGATTAATTCTGTCAGACAAAGGGCAGCTGGATTG...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CAA 90 bp AGATGCACATGGTTGCCTGGAGTCTATCGTACAATCATGTGCACTGCTGACAGTCTTCACATATTCTCCTaGTCCCAAATGCAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: RCTWLPGVYRTIMCTADSLHIFS*SQMQGF
Trigger: AAACCCTTGCATTTGGGACAAGGAGAATATGTGAAG...ACTGTCAGCAGTGCACATGATTGTACGATAGACTCCAGGCAACCATGTGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS TCA 90 bp GGGTATCTCCATACTGCTCTTTCCTTGGGTAACATCGGACAAGTTTaGAATACATCTTCTTCCAATCCAGCTGCCCTTTGTCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: GYLHTALSLGNIGQV*NTSSSNPAALCLTE
Trigger: TTCTGTCAGACAAAGGGCAGCTGGATTGGAAGAAGATGTATTTCAAACTTGTCCGATGTTACCCAAGGAAAGAGCAGTATGGAGATACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS-3UTR CAA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCCATACTGCTCTTTCCTaGGGTAACATCGGACAAGTT +
Preference number: 5 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLHTALS*GNIGQV
Trigger: AACTTGTCCGATGTTACCCAAGGAAAGAGCAGTATG...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CAA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTCAGAACTTGAACAAGTaGATAAAGTCCTGGGGTGAA +
Preference number: 5 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVQNLNK*IKSWGE
Trigger: TTCACCCCAGGACTTTATCAACTTGTTCAAGTTCTG...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CAA 90 bp TCTCCCCTCCAATGTCCTCTCCATGACTTATCTCTGAAGTTTCGAGCCAATGTTGCTGGGATTCAGAACTaGAACAAGTTGATAAAGTCC +
Preference number: 5 (lower is better)
Translates to: SPLQCPLHDLSLKFRANVAGIQN*NKLIKS
Trigger: GGACTTTATCAACTTGTTCAAGTTCTGAATCCCAGC...AACATTGGCTCGAAACTTCAGAGATAAGTCATGGAGAGGACATTGGAGGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CAA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTAAGCTGATATGTGGGTaGTGTGCTATTGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIIKLICG*CAIEGR
Trigger: CCTGCCCTCAATAGCACACAACCCACATATCAGCTT...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACCACAGATGCACATGGTaGCCTGGAGTCTATCGTACA +
Preference number: 5 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYHRCTW*PGVYRT
Trigger: TGTACGATAGACTCCAGGCAACCATGTGCATCTGTG...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS CCA 90 bp ACAGTGTTTGCAGAGCTGAAGGGTATCTCCATACTGCTCTTTCCTTaGGTAACATCGGACAAGTTTGAAATACATCTTCTTCCAATCCAG +
Preference number: 5 (lower is better)
Translates to: TVFAELKGISILLFP*VTSDKFEIHLLPIQ
Trigger: CTGGATTGGAAGAAGATGTATTTCAAACTTGTCCGATGTTACCCAAGGAAAGAGCAGTATGGAGATACCCTTCAGCTCTGCAAACACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS-3UTR CAA 90 bp AGTCCCTCTGAAATACGTCTTCCAAGCCACTTCAATGTAAACCTGATCATCATTATTCATGAAGTTCTTTaGGGCGATGCCACTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SPSEIRLPSHFNVNLIIIIHEVL*GDATQG
Trigger: TCCCTGAGTGGCATCGCCCAAAAGAACTTCATGAAT...AATGATGATCAGGTTTACATTGAAGTGGCTTGGAAGACGTATTTCAGAGGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCGACAGAATTAATCGTTaGCGGATCTGCCGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLDRINR*RICRSE
Trigger: CTCCGAGCGGCAGATCCGCAAACGATTAATTCTGTC...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CAA 90 bp AAGAGCAAGAATTGTCTTAACTCTCTTCACTTATATGTGAGGCTCTGGCCATACCCTCGTAAGATCCCCTaGGGATCTTCCTGTTTTAAC +
Preference number: 5 (lower is better)
Translates to: KSKNCLNSLHLYVRLWPYPRKIP*GSSCFN
Trigger: GTTAAAACAGGAAGATCCCAAGGGGATCTTACGAGG...GTATGGCCAGAGCCTCACATATAAGTGAAGAGAGTTAAGACAATTCTTGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp GAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCAGGGGCTGAAGCGGTGTaGTATCATAGCTTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: EPDNYRRSSFLFSSLGPAGAEAV*YHSLSL
Trigger: AAGAGACAAGCTATGATACAACACCGCTTCAGCCCC...TGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTAGAGCAGCCATCATTTTaGGCCAAATGGAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLEQPSF*AKWSRA
Trigger: GGCCCTGCTCCATTTGGCCAAAAATGATGGCTGCTC...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp GAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCAACTAACACAGATATGTaGTGCCTGCTGTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: EPDNYRRSSFLFSSLGPATNTDM*CLLCSS
Trigger: GGAAGAGCACAGCAGGCACAACATATCTGTGTTAGT...TGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS TCA 90 bp TGTCCTTCTTTCTCTTCTTGGCTGCAACATCATAGTTCAGGCTGTTaGAAAGATTCTCCTTATTGTATACCTCCTTGTTGCAGTAACTGC +
Preference number: 5 (lower is better)
Translates to: CPSFSSWLQHHSSGC*KDSPYCIPPCCSNC
Trigger: GCAGTTACTGCAACAAGGAGGTATACAATAAGGAGAATCTTTTCAACAGCCTGAACTATGATGTTGCAGCCAAGAAGAGAAAGAAGGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443022.2
ENST00000517956.5
ENST00000520511.1
ENST00000521719.5
CDS CCA 90 bp TTCAAGGACCTTTGCCATGAGGATGAGTTGTACCCCTTTCCGAACTaGAATTTAGTGTCTCTAAAATGTAGCTGGAGTTATTCATTTCCA +
Preference number: 5 (lower is better)
Translates to: FKDLCHEDELYPFPN*NLVSLKCSWSYSFP
Trigger: TGGAAATGAATAACTCCAGCTACATTTTAGAGACACTAAATTCCAGTTCGGAAAGGGGTACAACTCATCCTCATGGCAAAGGTCCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521719.5
CDS-3UTR CAA 90 bp TTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCCCTCCAATGTCCTCAAAAGATTCTCCTTATaGTATACCTCCTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: FTFLNSQSATAFLPSNVLKRFSL*YTSLLQ
Trigger: CTGCAACAAGGAGGTATACAATAAGGAGAATCTTTT...GAGGACATTGGAGGGGAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CAA 90 bp CTGAGAAATTGGAGAGAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCTTCTGCTTCACTTATTaGCCAAGGGCATGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LRNWREPDNYRRSSFLFSFCFTY*PRACRV
Trigger: CACCCTGCATGCCCTTGGCAAATAAGTGAAGCAGAA...GCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTCTCTCCAATTTCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCAATCCAGCTGCCCTTaGTCTGACAGAATTAATCGT +
Preference number: 5 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLQSSCP*SDRINR
Trigger: ACGATTAATTCTGTCAGACAAAGGGCAGCTGGATTG...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CAA 90 bp AATTCTAGTGAGAAGTTCACATTCTTAAATTCCCAGTCAGCAACTGCATTTCTCCAGAACTTGAACAAGTaGATAAAGTCCTGGGGTGAA +
Preference number: 5 (lower is better)
Translates to: NSSEKFTFLNSQSATAFLQNLNK*IKSWGE
Trigger: TTCACCCCAGGACTTTATCAACTTGTTCAAGTTCTG...GAGAAATGCAGTTGCTGACTGGGAATTTAAGAATGTGAACTTCTCACTAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443022.2
ENST00000517956.5
CDS-3UTR CAA 90 bp CTGAGAAATTGGAGAGAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAACAACATCTCTGTATaGGCCTACAGGTTCAGAGTG +
Preference number: 5 (lower is better)
Translates to: LRNWREPDNYRRSSFLFSNNISV*AYRFRV
Trigger: CACTCTGAACCTGTAGGCCAATACAGAGATGTTGTT...GCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTCTCTCCAATTTCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTATTTATAGCAAGCAGGTaGTACTCACTGGAATGCCAC +
Preference number: 5 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLFIASR*YSLECH
Trigger: GTGGCATTCCAGTGAGTACAACCTGCTTGCTATAAA...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTAGCTGGGATTCAGAACTaGAACAAGTTGATAAAGTCC +
Preference number: 5 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLAGIQN*NKLIKS
Trigger: GGACTTTATCAACTTGTTCAAGTTCTGAATCCCAGC...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp GAACCTGACAATTATAGAAGAAGTAGCTTTTTATTCAGCAGTCTAGGTCCTGCAAGGAGTTTCCATTCTTaGGAAAACCAAAGATGGTTA +
Preference number: 5 (lower is better)
Translates to: EPDNYRRSSFLFSSLGPARSFHS*ENQRWL
Trigger: TAACCATCTTTGGTTTTCCAAAGAATGGAAACTCCT...TGCAGGACCTAGACTGCTGAATAAAAAGCTACTTCTTCTATAATTGTCAGGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS-3UTR CAA 90 bp CGTGACCTTCCAAAGCTCAATCTTACCCAACAAAATCCTATTCTTTCATATTTATCCACAGTGAAGGGCTaGAGAAAAATCACATCCAAT +
Preference number: 5 (lower is better)
Translates to: RDLPKLNLTQQNPILSYLSTVKG*RKITSN
Trigger: ATTGGATGTGATTTTTCTCAAGCCCTTCACTGTGGA...TAAATATGAAAGAATAGGATTTTGTTGGGTAAGATTGAGCTTTGGAAGGTCACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517956.5
CDS CCA 90 bp TTGTACCCCTTTCCGAACTGGAATTTAGTGTCTCTAAAATGTAGCTaGAGTTATTCATTTCCATCCATTCACATGTCTTTAAGTCTAATG +
Preference number: 5 (lower is better)
Translates to: LYPFPNWNLVSLKCS*SYSFPSIHMSLSLM
Trigger: CATTAGACTTAAAGACATGTGAATGGATGGAAATGAATAACTCCAGCTACATTTTAGAGACACTAAATTCCAGTTCGGAAAGGGGTACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521719.5
CDS CCA 72 bp GCCCGGGGGACCGCCAGTCCTGCCCGAGGAATGGCATaGCACCGCGAGCGGACTAGACGGATGGGGAGACGG +
Preference number: 6 (lower is better)
Translates to: ARGTASPARGMA*HRERTRRMGRR
Trigger: CCGTCTCCCCATCCGTCTAGTCCGCTCGCGGTGCCATGCCATTCCTCGGGCAGGACTGGCGGTCCCCCGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443022.2
ENST00000517956.5
ENST00000520511.1
ENST00000521719.5
CDS CCA 72 bp GTTCTGCCCGGGGGACCGCCAGTCCTGCCCGAGGAATaGCATGGCACCGCGAGCGGACTAGACGGATGGGGA +
Preference number: 6 (lower is better)
Translates to: VLPGGPPVLPEE*HGTASGLDGWG
Trigger: TCCCCATCCGTCTAGTCCGCTCGCGGTGCCATGCCATTCCTCGGGCAGGACTGGCGGTCCCCCGGGCAGAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443022.2
ENST00000517956.5
ENST00000520511.1
ENST00000521719.5
CDS GCA 72 bp CCCAGGCTGACCAGGTCCCGCCCGTCGCTCAGCCTCTaGATGATGTTCAGTTGTAGGCACAAAGGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: PRLTRSRPSLSL*MMFSCRHKGRS
Trigger: TGACCTGCCTTTGTGCCTACAACTGAACATCATGCAGAGGCTGAGCGACGGGCGGGACCTGGTCAGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS CCA 72 bp GGGGTGAAAGTGAAACGGAGCAGCTCTCTGGGTTATTaGCAGTGCACGGATGGTCAGTGCCCTTCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: GVKVKRSSSLGY*QCTDGQCPSRK
Trigger: TTTCCTGGAAGGGCACTGACCATCCGTGCACTGCCAATAACCCAGAGAGCTGCTCCGTTTCACTTTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS CAA 72 bp TGGGGTGAAAGTGAAACGGAGCAGCTCTCTGGGTTATaGGCAGTGCACGGATGGTCAGTGCCCTTCCAGGAA +
Preference number: 6 (lower is better)
Translates to: WGESETEQLSGL*AVHGWSVPFQE
Trigger: TTCCTGGAAGGGCACTGACCATCCGTGCACTGCCAATAACCCAGAGAGCTGCTCCGTTTCACTTTCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS CAA 72 bp AACAGGCGGCAGGCTATTGACCTGAGGGCTAGAAGTTaGCTGACCCCTGCTGCAGACCTTCAAGGTAGAGTC +
Preference number: 6 (lower is better)
Translates to: NRRQAIDLRARS*LTPAADLQGRV
Trigger: GACTCTACCTTGAAGGTCTGCAGCAGGGGTCAGCAAACTTCTAGCCCTCAGGTCAATAGCCTGCCGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520511.1
CDS TCA 72 bp GTTCTTTTGGGCGATGCCACTCAGGGATGTGAGCTGTaGCTTTGCTATCAGCTCCAACAGCCGGACCACGTA +
Preference number: 6 (lower is better)
Translates to: VLLGDATQGCEL*LCYQLQQPDHV
Trigger: TACGTGGTCCGGCTGTTGGAGCTGATAGCAAAGTCACAGCTCACATCCCTGAGTGGCATCGCCCAAAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287396.2
ENST00000517956.5
ENST00000521719.5
CDS GCA 72 bp AAAGTGAAACGGAGCAGCTCTCTGGGTTATTGGCAGTaGACGGATGGTCAGTGCCCTTCCAGGAAAGGATGT +
Preference number: 6 (lower is better)
Translates to: KVKRSSSLGYWQ*TDGQCPSRKGC
Trigger: ACATCCTTTCCTGGAAGGGCACTGACCATCCGTGCACTGCCAATAACCCAGAGAGCTGCTCCGTTTCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS CCA 72 bp AGAATTAATCGTTTGCGGATCTGCCGCTCGGAGAAGTaGTACTGGCAGAGTTTCTTCCACAGCAGCCGGTCT +
Preference number: 6 (lower is better)
Translates to: RINRLRICRSEK*YWQSFFHSSRS
Trigger: AGACCGGCTGCTGTGGAAGAAACTCTGCCAGTACCACTTCTCCGAGCGGCAGATCCGCAAACGATTAATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS TCA 72 bp TGGAATCCAGAATGGCAGTTGAGAAGTCCAGTCTGTTaGAAGCTTCCCCCAGGGTGCAATATCCATGGCGCT +
Preference number: 6 (lower is better)
Translates to: WNPEWQLRSPVC*KLPPGCNIHGA
Trigger: AGCGCCATGGATATTGCACCCTGGGGGAAGCTTTCAACAGACTGGACTTCTCAACTGCCATTCTGGATTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000520511.1
ENST00000521719.5
CDS CAA 90 bp CCATACAAAAACAGGCGGCAGGCTATTGACCTGAGGGCTAGAAGTTaGCTGACCCCTGCTGCAGACCTTCAAGGTAGAGTCAGATCTATT +
Preference number: 6 (lower is better)
Translates to: PYKNRRQAIDLRARS*LTPAADLQGRVRSI
Trigger: AATAGATCTGACTCTACCTTGAAGGTCTGCAGCAGGGGTCAGCAAACTTCTAGCCCTCAGGTCAATAGCCTGCCGCCTGTTTTTGTATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520511.1
CDS TCA 72 bp ATATTCCCAGCTCTCCAGTCAGCAGGGGGACCCTTCTaGAGTGTTGTCATGTGCTGGGATTCAGAACTTGAA +
Preference number: 6 (lower is better)
Translates to: IFPALQSAGGPF*SVVMCWDSELE
Trigger: TTCAAGTTCTGAATCCCAGCACATGACAACACTTCAGAAGGGTCCCCCTGCTGACTGGAGAGCTGGGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS CAA 90 bp CAGGGGGACCCTTCTGAAGTGTTGTCATGTGCTGGGATTCAGAACTaGAACAAGTTGATAAAGTCCTGGGGTGAAAGTGAAACGGAGCAG +
Preference number: 6 (lower is better)
Translates to: QGDPSEVLSCAGIQN*NKLIKSWGESETEQ
Trigger: CTGCTCCGTTTCACTTTCACCCCAGGACTTTATCAACTTGTTCAAGTTCTGAATCCCAGCACATGACAACACTTCAGAAGGGTCCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS CAA 72 bp TACACCCACATGTTAATGTTCCCGACCAGCACAGACTaGCCGACTCTTTGGACCAGTGTACATAAGGATGTG +
Preference number: 6 (lower is better)
Translates to: YTHMLMFPTSTD*PTLWTSVHKDV
Trigger: CACATCCTTATGTACACTGGTCCAAAGAGTCGGCAAGTCTGTGCTGGTCGGGAACATTAACATGTGGGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287396.2
ENST00000517956.5
CDS CAA 90 bp CCTTCTGAAGTGTTGTCATGTGCTGGGATTCAGAACTTGAACAAGTaGATAAAGTCCTGGGGTGAAAGTGAAACGGAGCAGCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: PSEVLSCAGIQNLNK*IKSWGESETEQLSG
Trigger: CCCAGAGAGCTGCTCCGTTTCACTTTCACCCCAGGACTTTATCAACTTGTTCAAGTTCTGAATCCCAGCACATGACAACACTTCAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS CAA 90 bp CATCGGACAAGTTTGAAATACATCTTCTTCCAATCCAGCTGCCCTTaGTCTGACAGAATTAATCGTTTGCGGATCTGCCGCTCGGAGAAG +
Preference number: 6 (lower is better)
Translates to: HRTSLKYIFFQSSCP*SDRINRLRICRSEK
Trigger: CTTCTCCGAGCGGCAGATCCGCAAACGATTAATTCTGTCAGACAAAGGGCAGCTGGATTGGAAGAAGATGTATTTCAAACTTGTCCGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS CCA 72 bp ACCCAAGTAAGAATGAGCCAGTTAGAACAACCCAACTaGATTTTGCCGAATGAGCTTGATGCCTGTCTTAGG +
Preference number: 6 (lower is better)
Translates to: TQVRMSQLEQPN*ILPNELDACLR
Trigger: CCTAAGACAGGCATCAAGCTCATTCGGCAAAATCCAGTTGGGTTGTTCTAACTGGCTCATTCTTACTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287396.2
CDS CAA 72 bp GTGTTGTCATGTGCTGGGATTCAGAACTTGAACAAGTaGATAAAGTCCTGGGGTGAAAGTGAAACGGAGCAG +
Preference number: 6 (lower is better)
Translates to: VLSCAGIQNLNK*IKSWGESETEQ
Trigger: CTGCTCCGTTTCACTTTCACCCCAGGACTTTATCAACTTGTTCAAGTTCTGAATCCCAGCACATGACAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS CAA 72 bp TTGCTGGTCTTCAAGGACCTTTGCCATGAGGATGAGTaGTACCCCTTTCCGAACTGGAATTTAGTGTCTCTA +
Preference number: 6 (lower is better)
Translates to: LLVFKDLCHEDE*YPFPNWNLVSL
Trigger: TAGAGACACTAAATTCCAGTTCGGAAAGGGGTACAACTCATCCTCATGGCAAAGGTCCTTGAAGACCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521719.5
CDS GCA 72 bp AACATGAAAACAAAGGCACAGAAGTTACTCCTGCCATaGAGAGGTCACCCAAGTAAGAATGAGCCAGTTAGA +
Preference number: 6 (lower is better)
Translates to: NMKTKAQKLLLP*RGHPSKNEPVR
Trigger: TCTAACTGGCTCATTCTTACTTGGGTGACCTCTGCATGGCAGGAGTAACTTCTGTGCCTTTGTTTTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287396.2
CDS CAA 72 bp AGTTTGAAATACATCTTCTTCCAATCCAGCTGCCCTTaGTCTGACAGAATTAATCGTTTGCGGATCTGCCGC +
Preference number: 6 (lower is better)
Translates to: SLKYIFFQSSCP*SDRINRLRICR
Trigger: GCGGCAGATCCGCAAACGATTAATTCTGTCAGACAAAGGGCAGCTGGATTGGAAGAAGATGTATTTCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS TCA 72 bp CATACTGCTCTTTCCTTGGGTAACATCGGACAAGTTTaGAATACATCTTCTTCCAATCCAGCTGCCCTTTGT +
Preference number: 6 (lower is better)
Translates to: HTALSLGNIGQV*NTSSSNPAALC
Trigger: ACAAAGGGCAGCTGGATTGGAAGAAGATGTATTTCAAACTTGTCCGATGTTACCCAAGGAAAGAGCAGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS GCA 72 bp CGGACAAGTTTGAAATACATCTTCTTCCAATCCAGCTaGCCTTTGTCTGACAGAATTAATCGTTTGCGGATC +
Preference number: 6 (lower is better)
Translates to: RTSLKYIFFQSS*PLSDRINRLRI
Trigger: GATCCGCAAACGATTAATTCTGTCAGACAAAGGGCAGCTGGATTGGAAGAAGATGTATTTCAAACTTGTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS CCA 72 bp GTCTGGAGTAGTTCCCTTATTAGTCTAATGTTTTGCTaGTCTTCAAGGACCTTTGCCATGAGGATGAGTTGT +
Preference number: 6 (lower is better)
Translates to: VWSSSLISLMFC*SSRTFAMRMSC
Trigger: ACAACTCATCCTCATGGCAAAGGTCCTTGAAGACCAGCAAAACATTAGACTAATAAGGGAACTACTCCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521719.5
CDS CAA 72 bp CCTTCTGAAGTGTTGTCATGTGCTGGGATTCAGAACTaGAACAAGTTGATAAAGTCCTGGGGTGAAAGTGAA +
Preference number: 6 (lower is better)
Translates to: PSEVLSCAGIQN*NKLIKSWGESE
Trigger: TTCACTTTCACCCCAGGACTTTATCAACTTGTTCAAGTTCTGAATCCCAGCACATGACAACACTTCAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287396.2
ENST00000443022.2
ENST00000517956.5
ENST00000524000.5
CDS CCA 72 bp CTTTGCCATGAGGATGAGTTGTACCCCTTTCCGAACTaGAATTTAGTGTCTCTAAAATGTAGCTGGAGTTAT +
Preference number: 6 (lower is better)
Translates to: LCHEDELYPFPN*NLVSLKCSWSY
Trigger: ATAACTCCAGCTACATTTTAGAGACACTAAATTCCAGTTCGGAAAGGGGTACAACTCATCCTCATGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521719.5
CDS CCA 72 bp TTTCCGAACTGGAATTTAGTGTCTCTAAAATGTAGCTaGAGTTATTCATTTCCATCCATTCACATGTCTTTA +
Preference number: 6 (lower is better)
Translates to: FPNWNLVSLKCS*SYSFPSIHMSL
Trigger: TAAAGACATGTGAATGGATGGAAATGAATAACTCCAGCTACATTTTAGAGACACTAAATTCCAGTTCGGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521719.5