Pregenerated sensors for FAR1-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000254791Ensembl transcript IDs: ENST00000525233.1
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS GCA 90 bp | ACACCTCACATAAAACCTTCTCAGCCACCTTCCGGTTTCAGTAGGTaGCTCTTACTCCAGATCCACGTGTCCCCAGTTCTCCAGAGACCT | + |
Preference number: 5 (lower is better) Translates to: TPHIKPSQPPSGFSR*LLLQIHVSPVLQRP Trigger: AGGTCTCTGGAGAACTGGGGACACGTGGATCTGGAGTAAGAGGCACCTACTGAAACCGGAAGGTGGCTGAGAAGGTTTTATGTGAGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525233.1 |
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CDS GCA 72 bp | ATAAAACCTTCTCAGCCACCTTCCGGTTTCAGTAGGTaGCTCTTACTCCAGATCCACGTGTCCCCAGTTCTC | + |
Preference number: 6 (lower is better) Translates to: IKPSQPPSGFSR*LLLQIHVSPVL Trigger: GAGAACTGGGGACACGTGGATCTGGAGTAAGAGGCACCTACTGAAACCGGAAGGTGGCTGAGAAGGTTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525233.1 |
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CDS CAA 72 bp | CACAGCCTTCACCTACCACACATAAATCTACCGCGTTaGCTGCTTGTATACTTTGTCCTAACAGACCAACTA | + |
Preference number: 6 (lower is better) Translates to: HSLHLPHINLPR*LLVYFVLTDQL Trigger: TAGTTGGTCTGTTAGGACAAAGTATACAAGCAGCAAACGCGGTAGATTTATGTGTGGTAGGTGAAGGCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525233.1 |