Pregenerated sensors for FAM9B (Homo sapiens)
Ensembl gene IDs: ENSG00000177138Ensembl transcript IDs: ENST00000327220.10, ENST00000362066.7, ENST00000428477.1, ENST00000461107.5, ENST00000472522.6, ENST00000494744.1, ENST00000651278.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGTTGGGAGGTACATTCATCTCCACGGTACCAAGAGGTCAAGGTTaGTTGGCCATTGCATGTTGGAGCCGGACCAAGAACTCCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: RLGGTFISTVPRGQG*LAIACWSRTKNSQS Trigger: ACTCTGGGAGTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACCGTGGAGATGAATGTACCTCCCAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CCA 90 bp | TGGGAGGTACATTCATCTCCACGGTACCAAGAGGTCAAGGTTGCTTaGCCATTGCATGTTGGAGCCGGACCAAGAACTCCCAGAGTTCTA | + |
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Preference number: 5 (lower is better) Translates to: WEVHSSPRYQEVKVA*PLHVGAGPRTPRVL Trigger: TAGAACTCTGGGAGTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACCGTGGAGATGAATGTACCTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS GCA 90 bp | TACATTCATCTCCACGGTACCAAGAGGTCAAGGTTGCTTGGCCATTaGATGTTGGAGCCGGACCAAGAACTCCCAGAGTTCTATCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: YIHLHGTKRSRLLGH*MLEPDQELPEFYLL Trigger: TAGAAGATAGAACTCTGGGAGTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACCGTGGAGATGAATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS GCA 90 bp | CAACTGGTAATTTATAAGAAAAGAGGTTCAGCTGGCTCACAGTTCTaGAGGCTGTACAGGAAACATAGCTCCAGCATCTGCTTCTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: QLVIYKKRGSAGSQF*RLYRKHSSSICFWG Trigger: TCCCCAGAAGCAGATGCTGGAGCTATGTTTCCTGTACAGCCTGCAGAACTGTGAGCCAGCTGAACCTCTTTTCTTATAAATTACCAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472522.6 |
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| CDS GCA 90 bp | ATGCTTGTGACTGAGACAGTCGTACGAGCTGACTTGCCAAGGCTTTaGATTTATGTTGAGGAGGGTGTAGCAACTGGACAAACTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: MLVTETVVRADLPRL*IYVEEGVATGQTSL Trigger: CAAAGAAGTTTGTCCAGTTGCTACACCCTCCTCAACATAAATGCAAAGCCTTGGCAAGTCAGCTCGTACGACTGTCTCAGTCACAAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS TCA 90 bp | TACATAGATACAACAATGAATGCCATGGGGGCATTGACATTGGGATaGTTGATTGTTGGCTATCAAGGCTGGGACTCGGGTTCCAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: YIDTTMNAMGALTLG*LIVGYQGWDSGSKN Trigger: ATTCTTGGAACCCGAGTCCCAGCCTTGATAGCCAACAATCAATCATCCCAATGTCAATGCCCCCATGGCATTCATTGTTGTATCTATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CCA 90 bp | TGCCTATTATTTTATAGGACATTAACAACAGTCTGTGGGCTAGGTTaGGAGGTACATTCATCTCCACGGTACCAAGAGGTCAAGGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: CLLFYRTLTTVCGLG*EVHSSPRYQEVKVA Trigger: AGCAACCTTGACCTCTTGGTACCGTGGAGATGAATGTACCTCCCAACCTAGCCCACAGACTGTTGTTAATGTCCTATAAAATAATAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS TCA 90 bp | GTGTGCTTTCTTGGCTTTCATTTGAAGACACAGAGACTTCTCATTTaGTGGGAAGAGAGAGCTGGTTTCACTAAGCCTCCAGGATATGTT | + |
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Preference number: 5 (lower is better) Translates to: VCFLGFHLKTQRLLI*WEERAGFTKPPGYV Trigger: AACATATCCTGGAGGCTTAGTGAAACCAGCTCTCTCTTCCCATCAAATGAGAAGTCTCTGTGTCTTCAAATGAAAGCCAAGAAAGCACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000461107.5 ENST00000472522.6 ENST00000651278.1 |
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| CDS TCA 90 bp | GTTTTGTTGTATTCGACTCTGGGGTGTGCTTTCTTGGCTTTCATTTaGAGACACAGAGACTTCTCATTTGATGGGAAGAGAGAGCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: VLLYSTLGCAFLAFI*RHRDFSFDGKRELV Trigger: AACCAGCTCTCTCTTCCCATCAAATGAGAAGTCTCTGTGTCTTCAAATGAAAGCCAAGAAAGCACACCCCAGAGTCGAATACAACAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000461107.5 ENST00000472522.6 ENST00000651278.1 |
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| CDS CCA 90 bp | ACTGCTCTTCAAAGGCATTGCCTGATGTTTTGTTGTATTCGACTCTaGGGTGTGCTTTCTTGGCTTTCATTTGAAGACACAGAGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: TALQRHCLMFCCIRL*GVLSWLSFEDTETS Trigger: AGAAGTCTCTGTGTCTTCAAATGAAAGCCAAGAAAGCACACCCCAGAGTCGAATACAACAAAACATCAGGCAATGCCTTTGAAGAGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461107.5 ENST00000472522.6 ENST00000651278.1 |
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| CDS CCA 90 bp | TCCAGGATATGTTCCTTGAACTTTAATGAGCGGCGATTTCCCCTCTaGTTTCTGAAATTAGGTGTGTCACATGCTTTAACACAATCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SRICSLNFNERRFPL*FLKLGVSHALTQSA Trigger: AGCTGATTGTGTTAAAGCATGTGACACACCTAATTTCAGAAACCAGAGGGGAAATCGCCGCTCATTAAAGTTCAAGGAACATATCCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461107.5 ENST00000472522.6 ENST00000651278.1 |
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| CDS CCA 90 bp | CATTGCCTGATGTTTTGTTGTATTCGACTCTGGGGTGTGCTTTCTTaGCTTTCATTTGAAGACACAGAGACTTCTCATTTGATGGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: HCLMFCCIRLWGVLS*LSFEDTETSHLMGR Trigger: TCTTCCCATCAAATGAGAAGTCTCTGTGTCTTCAAATGAAAGCCAAGAAAGCACACCCCAGAGTCGAATACAACAAAACATCAGGCAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000461107.5 ENST00000472522.6 ENST00000651278.1 |
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| CDS CCA 90 bp | ATAATCTTCAAATCCTTGAACTTTAATGAGCGGCGATTTCCCCTCTaGTTTCTGAAATTAGGTGTGTCACATGCTTTAACACAATCAGCT | + |
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Preference number: 5 (lower is better) Translates to: IIFKSLNFNERRFPL*FLKLGVSHALTQSA Trigger: AGCTGATTGTGTTAAAGCATGTGACACACCTAATTTCAGAAACCAGAGGGGAAATCGCCGCTCATTAAAGTTCAAGGATTTGAAGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS TCA 90 bp | TCTCTCCTAACACTTCTATATTGTTGCCACTTCTTCTGTTGTTCTTaGAATATTCTAATTAGTTCTTCCTCTTCTCCCTCTTCTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SLLTLLYCCHFFCCS*NILISSSSSPSSSS Trigger: AGAAGAAGAAGAGGGAGAAGAGGAAGAACTAATTAGAATATTTCAAGAACAACAGAAGAAGTGGCAACAATATAGAAGTGTTAGGAGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000327220.10 ENST00000362066.7 ENST00000428477.1 ENST00000461107.5 ENST00000472522.6 ENST00000651278.1 |
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| CDS CCA 72 bp | GTACAGACGGACAGGAAGAGAGGAACAACAGACAACTaGGCCTACTTGAGGGTGGAGGGTAGGAGGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VQTDRKRGTTDN*AYLRVEGRRRV Trigger: CACCCTCCTCCTACCCTCCACCCTCAAGTAGGCCCAGTTGTCTGTTGTTCCTCTCTTCCTGTCCGTCTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461107.5 |
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| CDS GCA 72 bp | CTCCACGGTACCAAGAGGTCAAGGTTGCTTGGCCATTaGATGTTGGAGCCGGACCAAGAACTCCCAGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LHGTKRSRLLGH*MLEPDQELPEF Trigger: GAACTCTGGGAGTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACCGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CCA 72 bp | CATTCATCTCCACGGTACCAAGAGGTCAAGGTTGCTTaGCCATTGCATGTTGGAGCCGGACCAAGAACTCCC | + |
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Preference number: 6 (lower is better) Translates to: HSSPRYQEVKVA*PLHVGAGPRTP Trigger: GGGAGTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACCGTGGAGATGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CAA 72 bp | TCTCCACGGTACCAAGAGGTCAAGGTTGCTTGGCCATaGCATGTTGGAGCCGGACCAAGAACTCCCAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: SPRYQEVKVAWP*HVGAGPRTPRV Trigger: AACTCTGGGAGTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACCGTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS GCA 72 bp | GGTACATTCATCTCCACGGTACCAAGAGGTCAAGGTTaGTTGGCCATTGCATGTTGGAGCCGGACCAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: GTFISTVPRGQG*LAIACWSRTKN Trigger: GTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACCGTGGAGATGAATGTACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CAA 72 bp | ACATTCATCTCCACGGTACCAAGAGGTCAAGGTTGCTaGGCCATTGCATGTTGGAGCCGGACCAAGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: TFISTVPRGQGC*AIACWSRTKNS Trigger: GGAGTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACCGTGGAGATGAATGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CAA 90 bp | TTGGGAGGTACATTCATCTCCACGGTACCAAGAGGTCAAGGTTGCTaGGCCATTGCATGTTGGAGCCGGACCAAGAACTCCCAGAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LGGTFISTVPRGQGC*AIACWSRTKNSQSS Trigger: AGAACTCTGGGAGTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACCGTGGAGATGAATGTACCTCCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CAA 90 bp | CATCTCCACGGTACCAAGAGGTCAAGGTTGCTTGGCCATTGCATGTaGGAGCCGGACCAAGAACTCCCAGAGTTCTATCTTCTAGGATTG | + |
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Preference number: 6 (lower is better) Translates to: HLHGTKRSRLLGHCM*EPDQELPEFYLLGL Trigger: CAATCCTAGAAGATAGAACTCTGGGAGTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACCGTGGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CCA 72 bp | GTACCAAGAGGTCAAGGTTGCTTGGCCATTGCATGTTaGAGCCGGACCAAGAACTCCCAGAGTTCTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: VPRGQGCLAIAC*SRTKNSQSSIF Trigger: GAAGATAGAACTCTGGGAGTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CAA 72 bp | GGTACCAAGAGGTCAAGGTTGCTTGGCCATTGCATGTaGGAGCCGGACCAAGAACTCCCAGAGTTCTATCTT | + |
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Preference number: 6 (lower is better) Translates to: GTKRSRLLGHCM*EPDQELPEFYL Trigger: AAGATAGAACTCTGGGAGTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CAA 72 bp | AGGTACATTCATCTCCACGGTACCAAGAGGTCAAGGTaGCTTGGCCATTGCATGTTGGAGCCGGACCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: RYIHLHGTKRSR*LGHCMLEPDQE Trigger: TTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACCGTGGAGATGAATGTACCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CAA 90 bp | GTACATTCATCTCCACGGTACCAAGAGGTCAAGGTTGCTTGGCCATaGCATGTTGGAGCCGGACCAAGAACTCCCAGAGTTCTATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VHSSPRYQEVKVAWP*HVGAGPRTPRVLSS Trigger: AGAAGATAGAACTCTGGGAGTTCTTGGTCCGGCTCCAACATGCAATGGCCAAGCAACCTTGACCTCTTGGTACCGTGGAGATGAATGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS TCA 72 bp | ACAACAATGAATGCCATGGGGGCATTGACATTGGGATaGTTGATTGTTGGCTATCAAGGCTGGGACTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: TTMNAMGALTLG*LIVGYQGWDSG Trigger: ACCCGAGTCCCAGCCTTGATAGCCAACAATCAATCATCCCAATGTCAATGCCCCCATGGCATTCATTGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS GCA 72 bp | ACTGAGACAGTCGTACGAGCTGACTTGCCAAGGCTTTaGATTTATGTTGAGGAGGGTGTAGCAACTGGACAA | + |
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Preference number: 6 (lower is better) Translates to: TETVVRADLPRL*IYVEEGVATGQ Trigger: TTGTCCAGTTGCTACACCCTCCTCAACATAAATGCAAAGCCTTGGCAAGTCAGCTCGTACGACTGTCTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CAA 90 bp | ATGTTGGAGCCGGACCAAGAACTCCCAGAGTTCTATCTTCTAGGATaGCTTTCATCCCAATGTGCCACACTTTTTCCCTCTAAACTGTGC | + |
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Preference number: 6 (lower is better) Translates to: MLEPDQELPEFYLLG*LSSQCATLFPSKLC Trigger: GCACAGTTTAGAGGGAAAAAGTGTGGCACATTGGGATGAAAGCAATCCTAGAAGATAGAACTCTGGGAGTTCTTGGTCCGGCTCCAACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CAA 72 bp | CCGGACCAAGAACTCCCAGAGTTCTATCTTCTAGGATaGCTTTCATCCCAATGTGCCACACTTTTTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PDQELPEFYLLG*LSSQCATLFPS Trigger: AGAGGGAAAAAGTGTGGCACATTGGGATGAAAGCAATCCTAGAAGATAGAACTCTGGGAGTTCTTGGTCCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CAA 72 bp | ATGATGCTTGTGACTGAGACAGTCGTACGAGCTGACTaGCCAAGGCTTTGCATTTATGTTGAGGAGGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: MMLVTETVVRAD*PRLCIYVEEGV Trigger: TACACCCTCCTCAACATAAATGCAAAGCCTTGGCAAGTCAGCTCGTACGACTGTCTCAGTCACAAGCATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS GCA 72 bp | ATTTATAAGAAAAGAGGTTCAGCTGGCTCACAGTTCTaGAGGCTGTACAGGAAACATAGCTCCAGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: IYKKRGSAGSQF*RLYRKHSSSIC Trigger: GCAGATGCTGGAGCTATGTTTCCTGTACAGCCTGCAGAACTGTGAGCCAGCTGAACCTCTTTTCTTATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472522.6 |
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| CDS CCA 72 bp | TTTTATAGGACATTAACAACAGTCTGTGGGCTAGGTTaGGAGGTACATTCATCTCCACGGTACCAAGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: FYRTLTTVCGLG*EVHSSPRYQEV Trigger: GACCTCTTGGTACCGTGGAGATGAATGTACCTCCCAACCTAGCCCACAGACTGTTGTTAATGTCCTATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS TCA 72 bp | CTTGGCTTTCATTTGAAGACACAGAGACTTCTCATTTaGTGGGAAGAGAGAGCTGGTTTCACTAAGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LGFHLKTQRLLI*WEERAGFTKPP Trigger: TGGAGGCTTAGTGAAACCAGCTCTCTCTTCCCATCAAATGAGAAGTCTCTGTGTCTTCAAATGAAAGCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000461107.5 ENST00000472522.6 ENST00000651278.1 |
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| CDS TCA 72 bp | TATTCGACTCTGGGGTGTGCTTTCTTGGCTTTCATTTaGAGACACAGAGACTTCTCATTTGATGGGAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: YSTLGCAFLAFI*RHRDFSFDGKR Trigger: TCTCTTCCCATCAAATGAGAAGTCTCTGTGTCTTCAAATGAAAGCCAAGAAAGCACACCCCAGAGTCGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461107.5 ENST00000472522.6 ENST00000651278.1 |
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| CDS CAA 72 bp | AAAGAAAACTGCTCTTCAAAGGCATTGCCTGATGTTTaGTTGTATTCGACTCTGGGGTGTGCTTTCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: KENCSSKALPDV*LYSTLGCAFLA Trigger: AGCCAAGAAAGCACACCCCAGAGTCGAATACAACAAAACATCAGGCAATGCCTTTGAAGAGCAGTTTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000461107.5 ENST00000472522.6 ENST00000651278.1 |
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| CDS CAA 72 bp | ATGACAAAAATTGAAGACCGACAATACCAAATGACGTaGAGGAATTGGGGCAACTCGAATCTCAGGCATGCA | + |
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Preference number: 6 (lower is better) Translates to: MTKIEDRQYQMT*RNWGNSNLRHA Trigger: TGCATGCCTGAGATTCGAGTTGCCCCAATTCCTCAACGTCATTTGGTATTGTCGGTCTTCAATTTTTGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000472522.6 |
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| CDS CCA 72 bp | TGTTCCTTGAACTTTAATGAGCGGCGATTTCCCCTCTaGTTTCTGAAATTAGGTGTGTCACATGCTTTAACA | + |
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Preference number: 6 (lower is better) Translates to: CSLNFNERRFPL*FLKLGVSHALT Trigger: TGTTAAAGCATGTGACACACCTAATTTCAGAAACCAGAGGGGAAATCGCCGCTCATTAAAGTTCAAGGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461107.5 ENST00000472522.6 ENST00000651278.1 |
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| CDS CCA 72 bp | AAATCCTTGAACTTTAATGAGCGGCGATTTCCCCTCTaGTTTCTGAAATTAGGTGTGTCACATGCTTTAACA | + |
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Preference number: 6 (lower is better) Translates to: KSLNFNERRFPL*FLKLGVSHALT Trigger: TGTTAAAGCATGTGACACACCTAATTTCAGAAACCAGAGGGGAAATCGCCGCTCATTAAAGTTCAAGGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS CAA 72 bp | TTCAGAGTCAAAACCAGAATCAGTGAGGTGCCATACTaGGGCATGGAAATAAAGGTAGAACTTAGACCAATA | + |
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Preference number: 6 (lower is better) Translates to: FRVKTRISEVPY*GMEIKVELRPI Trigger: TATTGGTCTAAGTTCTACCTTTATTTCCATGCCCAAGTATGGCACCTCACTGATTCTGGTTTTGACTCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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| CDS TCA 72 bp | GTCCTTCAAAAGTCTAGAATAGTAACTATGATTCAGTaGTTCAGATGGTGGAGTTGGGGGAATATTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VLQKSRIVTMIQ*FRWWSWGNISS Trigger: TGAAGAAATATTCCCCCAACTCCACCATCTGAATCACTGAATCATAGTTACTATTCTAGACTTTTGAAGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494744.1 |
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