Pregenerated sensors for FAM9A (Homo sapiens)
Ensembl gene IDs: ENSG00000183304Ensembl transcript IDs: ENST00000381003.7, ENST00000543214.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TACTACTATTACTTCTGCTGCTGCTGCTGCGGCTTCTGCTGCTGCTaGGGCTTCTGCTGCTGCTGCTGCGGCTTCTGCTTCTTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YYYYFCCCCCGFCCC*GFCCCCCGFCFFCF Trigger: GAAGCAGAAGAAGCAGAAGCCGCAGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGCAGAAGTAATAGTAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381003.7 ENST00000543214.1 |
||
| CDS GCA 90 bp | TTCTACTACTATTACTTCTGCTGCTGCTGCTGCGGCTTCTGCTGCTaGTGCGGCTTCTGCTGCTGCTGCTGCGGCTTCTGCTTCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FYYYYFCCCCCGFCC*CGFCCCCCGFCFFC Trigger: GCAGAAGAAGCAGAAGCCGCAGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGCAGAAGTAATAGTAGTAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381003.7 ENST00000543214.1 |
||
| CDS GCA 90 bp | GTCTTCTACTACTATTACTTCTGCTGCTGCTGCTGCGGCTTCTGCTaGTGCTGCGGCTTCTGCTGCTGCTGCTGCGGCTTCTGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFYYYYFCCCCCGFC*CCGFCCCCCGFCFF Trigger: GAAGAAGCAGAAGCCGCAGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGCAGAAGTAATAGTAGTAGAAGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381003.7 ENST00000543214.1 |
||
| CDS GCA 90 bp | TTCGTCTTCTACTACTATTACTTCTGCTGCTGCTGCTGCGGCTTCTaGTGCTGCTGCGGCTTCTGCTGCTGCTGCTGCGGCTTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FVFYYYYFCCCCCGF*CCCGFCCCCCGFCF Trigger: GAAGCAGAAGCCGCAGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGCAGAAGTAATAGTAGTAGAAGACGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381003.7 ENST00000543214.1 |
||
| CDS GCA 90 bp | CTCTTCCTCCTCTTCGTCTTCTACTACTATTACTTCTGCTGCTGCTaGTGCGGCTTCTGCTGCTGCTGCGGCTTCTGCTGCTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFLLFVFYYYYFCCC*CGFCCCCGFCCCCC Trigger: GCAGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGCAGAAGTAATAGTAGTAGAAGACGAAGAGGAGGAAGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381003.7 ENST00000543214.1 |
||
| CDS GCA 72 bp | TACTATTACTTCTGCTGCTGCTGCTGCGGCTTCTGCTaGTGCTGCGGCTTCTGCTGCTGCTGCTGCGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: YYYFCCCCCGFC*CCGFCCCCCGF Trigger: GAAGCCGCAGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGCAGAAGTAATAGTA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381003.7 ENST00000543214.1 |
||
| CDS GCA 72 bp | TACTACTATTACTTCTGCTGCTGCTGCTGCGGCTTCTaGTGCTGCTGCGGCTTCTGCTGCTGCTGCTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: YYYYFCCCCCGF*CCCGFCCCCCG Trigger: GCCGCAGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGCAGAAGTAATAGTAGTA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381003.7 ENST00000543214.1 |
||
| CDS GCA 72 bp | CTCTTCGTCTTCTACTACTATTACTTCTGCTGCTGCTaGTGCGGCTTCTGCTGCTGCTGCGGCTTCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LFVFYYYYFCCC*CGFCCCCGFCC Trigger: GCAGCAGAAGCCGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGCAGAAGTAATAGTAGTAGAAGACGAAGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381003.7 ENST00000543214.1 |
||
| CDS GCA 72 bp | CTCCTCTTCGTCTTCTACTACTATTACTTCTGCTGCTaGTGCTGCGGCTTCTGCTGCTGCTGCGGCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLFVFYYYYFCC*CCGFCCCCGFC Trigger: GCAGAAGCCGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGCAGAAGTAATAGTAGTAGAAGACGAAGAGGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381003.7 ENST00000543214.1 |
||
| CDS GCA 72 bp | TTCCTCCTCTTCGTCTTCTACTACTATTACTTCTGCTaGTGCTGCTGCGGCTTCTGCTGCTGCTGCGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLLFVFYYYYFC*CCCGFCCCCGF Trigger: GAAGCCGCAGCAGCAGCAGAAGCCGCAGCAGCAGCAGCAGAAGTAATAGTAGTAGAAGACGAAGAGGAGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381003.7 ENST00000543214.1 |
||