RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM83G (Homo sapiens)

Ensembl gene IDs: ENSG00000188522

Ensembl transcript IDs: ENST00000345041.4, ENST00000388995.11, ENST00000399096.2, ENST00000580115.1

Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTaGCCTCCGCGTCATGAGTCTGGGCTGGGGCCTCAGAAGGTGTGG +
Preference number: 1 (lower is better)
Translates to: LPAVPVGSGRPRRPV*PPRHESGLGPQKVW
Trigger: CCACACCTTCTGAGGCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
3UTR GCA 90 bp GGCCCCTCAGGGACTGCCCTGGCTGGTAGAGGCTACCCACCCTGCTaGCCCGCTGTTACCAGCTCTGGCCCTGGCAAGGAGCTGACTCAG +
Preference number: 1 (lower is better)
Translates to: GPSGTALAGRGYPPC*PAVTSSGPGKELTQ
Trigger: CTGAGTCAGCTCCTTGCCAGGGCCAGAGCTGGTAACAGCGGGGCAGCAGGGTGGGTAGCCTCTACCAGCCAGGGCAGTCCCTGAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR GCA 90 bp GCTGGCCCCTCAGGGACTGCCCTGGCTGGTAGAGGCTACCCACCCTaGTGCCCCGCTGTTACCAGCTCTGGCCCTGGCAAGGAGCTGACT +
Preference number: 1 (lower is better)
Translates to: AGPSGTALAGRGYPP*CPAVTSSGPGKELT
Trigger: AGTCAGCTCCTTGCCAGGGCCAGAGCTGGTAACAGCGGGGCAGCAGGGTGGGTAGCCTCTACCAGCCAGGGCAGTCCCTGAGGGGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR GCA 90 bp GTCTCCCCTCCTTATCCACAGGCCACCGAGGCCCAGAGAGGGCCTTaGCCGAGGTCACCCAGGGAGTGGCTTGCTGGAGCCCTGGGAATA +
Preference number: 1 (lower is better)
Translates to: VSPPYPQATEAQRGP*PRSPREWLAGALGI
Trigger: TATTCCCAGGGCTCCAGCAAGCCACTCCCTGGGTGACCTCGGGCAAGGCCCTCTCTGGGCCTCGGTGGCCTGTGGATAAGGAGGGGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR GCA 90 bp CCTCCGCAGCTGGACCTGTACGCGGGGGCTCTGTTTGTGCACATCTaGCTGGGCTGGAACTTCTACCTCTCCACCATCCTCACGCTCGGC +
Preference number: 1 (lower is better)
Translates to: PPQLDLYAGALFVHI*LGWNFYLSTILTLG
Trigger: GCCGAGCGTGAGGATGGTGGAGAGGTAGAAGTTCCAGCCCAGGCAGATGTGCACAAACAGAGCCCCCGCGTACAGGTCCAGCTGCGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 90 bp CCATCCTCACGCTCGGCATCACAGCCCTGTACACCATCGCAGGTATaGTGCCTGCAGCAGGGAGGTCCACCCAGGGGACGTGTAAAGGGG +
Preference number: 1 (lower is better)
Translates to: PSSRSASQPCTPSQV*CLQQGGPPRGRVKG
Trigger: CCCCTTTACACGTCCCCTGGGTGGACCTCCCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGTGATGCCGAGCGTGAGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR TCA 90 bp CGGACGCCCTGCAGACGCTCATCATGGTGGTGGGGGCTGTCATCCTaGCAATCAAAGGTGAGGACAGAGTCTGTGGCCATGGCGGGGCTG +
Preference number: 1 (lower is better)
Translates to: RTPCRRSSWWWGLSS*QSKVRTESVAMAGL
Trigger: CAGCCCCGCCATGGCCACAGACTCTGTCCTCACCTTTGATTGTCAGGATGACAGCCCCCACCACCATGATGAGCGTCTGCAGGGCGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR GCA 90 bp ACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTaGACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTT +
Preference number: 1 (lower is better)
Translates to: TGMTFGLTIMATWYW*TDQVSANVSRPSHL
Trigger: AAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
3UTR GCA 90 bp TGTCCCCACAGCGAGCCCTTTGGAGTCTGGCACTGCCCGGCACTGTaGAGGATTCATGCCGTTGGGGTTCTGGGTAGCATCGCTGGGAGT +
Preference number: 1 (lower is better)
Translates to: CPHSEPFGVWHCPAL*RIHAVGVLGSIAGS
Trigger: ACTCCCAGCGATGCTACCCAGAACCCCAACGGCATGAATCCTGCACAGTGCCGGGCAGTGCCAGACTCCAAAGGGCTCGCTGTGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR GCA 90 bp TCCTCACGCTCGGCATCACAGCCCTGTACACCATCGCAGGTATGGTaGCTGCAGCAGGGAGGTCCACCCAGGGGACGTGTAAAGGGGTCA +
Preference number: 1 (lower is better)
Translates to: SSRSASQPCTPSQVW*LQQGGPPRGRVKGS
Trigger: TGACCCCTTTACACGTCCCCTGGGTGGACCTCCCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGTGATGCCGAGCGTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 90 bp TCTGGCACTGCCCGGCACTGTGCAGGATTCATGCCGTTGGGGTTCTaGGTAGCATCGCTGGGAGTGGGTGGGTTCAGGAGGTTGAGCCAC +
Preference number: 1 (lower is better)
Translates to: SGTARHCAGFMPLGF*VASLGVGGFRRLSH
Trigger: GTGGCTCAACCTCCTGAACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCATGAATCCTGCACAGTGCCGGGCAGTGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR TCA 90 bp GCAACCACCAAACTGTCCCTGTTCCACCCTGACCCCTCCAGCTTTTaGCCAGATCGGTGGTTACGGGCAGCTGGAGGCAGCCTACGCCCA +
Preference number: 1 (lower is better)
Translates to: ATTKLSLFHPDPSSF*PDRWLRAAGGSLRP
Trigger: TGGGCGTAGGCTGCCTCCAGCTGCCCGTAACCACCGATCTGGTCAAAAGCTGGAGGGGTCAGGGTGGAACAGGGACAGTTTGGTGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 90 bp CTGGACCTGTACGCGGGGGCTCTGTTTGTGCACATCTGCCTGGGCTaGAACTTCTACCTCTCCACCATCCTCACGCTCGGCATCACAGCC +
Preference number: 1 (lower is better)
Translates to: LDLYAGALFVHICLG*NFYLSTILTLGITA
Trigger: GGCTGTGATGCCGAGCGTGAGGATGGTGGAGAGGTAGAAGTTCCAGCCCAGGCAGATGTGCACAAACAGAGCCCCCGCGTACAGGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 90 bp CGCAGCTGGACCTGTACGCGGGGGCTCTGTTTGTGCACATCTGCCTaGGCTGGAACTTCTACCTCTCCACCATCCTCACGCTCGGCATCA +
Preference number: 1 (lower is better)
Translates to: RSWTCTRGLCLCTSA*AGTSTSPPSSRSAS
Trigger: TGATGCCGAGCGTGAGGATGGTGGAGAGGTAGAAGTTCCAGCCCAGGCAGATGTGCACAAACAGAGCCCCCGCGTACAGGTCCAGCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 90 bp TTGCCCAAGGCCGATGAGTGTCCAGAGGCCAACAGTGACTCCTGCTaGGCCAGCGGGACACTGGGGTGCCCATGTGCAAAATGCTTACTT +
Preference number: 1 (lower is better)
Translates to: LPKADECPEANSDSC*ASGTLGCPCAKCLL
Trigger: AAGTAAGCATTTTGCACATGGGCACCCCAGTGTCCCGCTGGCCCAGCAGGAGTCACTGTTGGCCTCTGGACACTCATCGGCCTTGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 90 bp CTGCCTCTTCCATGTCCCACTTGGAAAAGGCTAGGGAGTAGGGCCTaGGGTGGAAACGGGTTTTCCTACATCCAGGCTTCTCCCTCTCAG +
Preference number: 1 (lower is better)
Translates to: LPLPCPTWKRLGSRA*GGNGFSYIQASPSQ
Trigger: CTGAGAGGGAGAAGCCTGGATGTAGGAAAACCCGTTTCCACCCCAGGCCCTACTCCCTAGCCTTTTCCAAGTGGGACATGGAAGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR TCA 90 bp ATTTGCTCTGAGCCTCACACAAACCCTCGGTCTGAATACAGAGCCTaGCCTGAGCTCCATGGGAACAGTGATGCTGGGGAGACCAGCATC +
Preference number: 1 (lower is better)
Translates to: ICSEPHTNPRSEYRA*PELHGNSDAGETSI
Trigger: GATGCTGGTCTCCCCAGCATCACTGTTCCCATGGAGCTCAGGTCAGGCTCTGTATTCAGACCGAGGGTTTGTGTGAGGCTCAGAGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR TCA 90 bp AAGGCATTGGCCACTTTGGACTTTATTAGCAACAGTAATGTCCCCTaGCATCCGCACAAGCTTGTAGCTCCACGGCCAGGTCTTCCCCCA +
Preference number: 1 (lower is better)
Translates to: KALATLDFISNSNVP*HPHKLVAPRPGLPP
Trigger: TGGGGGAAGACCTGGCCGTGGAGCTACAAGCTTGTGCGGATGTCAGGGGACATTACTGTTGCTAATAAAGTCCAAAGTGGCCAATGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 90 bp CTCAGACACTGGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAATaGCACTTGTTCATTTGCTCTGAGCCTCACACAAACCCTCGGTCT +
Preference number: 1 (lower is better)
Translates to: LRHWDPVAEQFLTLE*HLFICSEPHTNPRS
Trigger: AGACCGAGGGTTTGTGTGAGGCTCAGAGCAAATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCAGTGTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 90 bp TCAAGAAAAATTACTTTTGCTTCCTTGAATCGACAATCGGAAACCTaGCTGAGAACCACTTGCCCAAGGCCGATGAGTGTCCAGAGGCCA +
Preference number: 1 (lower is better)
Translates to: SRKITFASLNRQSET*LRTTCPRPMSVQRP
Trigger: TGGCCTCTGGACACTCATCGGCCTTGGGCAAGTGGTTCTCAGCCAGGTTTCCGATTGTCGATTCAAGGAAGCAAAAGTAATTTTTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 90 bp TCAGAGAGTGAACAAATCTCTAAAGACTCTTCCAGACTCAGACACTaGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAATGGCACTTG +
Preference number: 1 (lower is better)
Translates to: SESEQISKDSSRLRH*DPVAEQFLTLEWHL
Trigger: CAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCAGTGTCTGAGTCTGGAAGAGTCTTTAGAGATTTGTTCACTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR TCA 90 bp GGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCCTGCCCTCCGCGTCATaGGTCTGGGCTGGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: GECQRLPPIPPSCRPSGLLPSAS*VWAGAS
Trigger: TGAGGCCCCAGCCCAGACTCATGACGCGGAGGGCAG...GAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
3UTR-3UTR TCA 90 bp TGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCTGCCCTCCGCGTCATaGGTCTGGGCTGGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: CTDQVSANVSRPSHLPAVLPSAS*VWAGAS
Trigger: TGAGGCCCCAGCCCAGACTCATGACGCGGAGGGCAG...GACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
3UTR-3UTR TCA 90 bp GGGCCTTGCCCGAGGTCACCCAGGGAGTGGCTTGCTGGAGCCCTGGGAATAACAGGTGCACCGACCAGGTaGGTGCCAACGTCTCCCGCC +
Preference number: 2 (lower is better)
Translates to: GPCPRSPREWLAGALGITGAPTR*VPTSPA
Trigger: GGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACC...TGTTATTCCCAGGGCTCCAGCAAGCCACTCCCTGGGTGACCTCGGGCAAGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR TCA 90 bp GGCCAGGTCTTCCCCCAACCTCACAATGGCCCCGTGATGCAGGCAGGCAGGCGACTGGGACCCACCGCATaGGAGGGATCCCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: GQVFPQPHNGPVMQAGRRLGPTA*EGSQQP
Trigger: TGGCTGCTGGGATCCCTCTCATGCGGTGGGTCCCAG...TCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAGGTTGGGGGAAGACCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR GCA 90 bp TGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCCAGGCGGCCTGTCTaGCCTCCGCGTCATGAGTCT +
Preference number: 2 (lower is better)
Translates to: CTDQVSANVSRPSHLPAVPRRPV*PPRHES
Trigger: AGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGG...GACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
3UTR-3UTR GCA 90 bp ATGCCGTTGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTGGGTTCAGGAGGTTGGCCAGGGCTTGGCCATaGCGGGCCCTGACCCCGAGG +
Preference number: 2 (lower is better)
Translates to: MPLGFWVASLGVGGFRRLARAWP*RALTPR
Trigger: CCTCGGGGTCAGGGCCCGGCATGGCCAAGCCCTGGC...CAACCTCCTGAACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR TCA 90 bp CCAGGTCTTCCCCCAACCTCACAATGGCCCCGTGATGCAGGCAGGCAGGCGAGTTCCAGAGGCCAACAGTaGCTCCTGCTGGGCCAGCGG +
Preference number: 2 (lower is better)
Translates to: PGLPPTSQWPRDAGRQASSRGQQ*LLLGQR
Trigger: CCGCTGGCCCAGCAGGAGTCACTGTTGGCCTCTGGA...ACTCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAGGTTGGGGGAAGACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR TCA 90 bp GGAGCCCTGGGAATAACAGTCCCACACAAGGCTCTCTCCCTCCGCAGCTGGACCGGCCATGCCGGGCCCTaGCCCCGAGGTAGACAGGAA +
Preference number: 2 (lower is better)
Translates to: GALGITVPHKALSLRSWTGHAGP*PRGRQE
Trigger: TTCCTGTCTACCTCGGGGTCAGGGCCCGGCATGGCC...GGTCCAGCTGCGGAGGGAGAGAGCCTTGTGTGGGACTGTTATTCCCAGGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR GCA 90 bp CAGCAGGGAGGTCCACCCAGGGGACGTGTAAAGGGGTCAGAAGGCCACCTCCCCGGCTACCCACCCTGCTaGCCCGCTGTTACCAGCTCT +
Preference number: 2 (lower is better)
Translates to: QQGGPPRGRVKGSEGHLPGYPPC*PAVTSS
Trigger: AGAGCTGGTAACAGCGGGGCAGCAGGGTGGGTAGCC...GGGGAGGTGGCCTTCTGACCCCTTTACACGTCCCCTGGGTGGACCTCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR GCA 90 bp GGAGCCCTGGGAATAACAGTCCCACACAAGGCTCTCTCCCTCCGCAGCTGGACCCCCAGGCGGCCTGTCTaGCCTCCGCGTCATGAGTCT +
Preference number: 2 (lower is better)
Translates to: GALGITVPHKALSLRSWTPRRPV*PPRHES
Trigger: AGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGG...GGTCCAGCTGCGGAGGGAGAGAGCCTTGTGTGGGACTGTTATTCCCAGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CCA 90 bp GCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATGGGGCCTCAGAAGGTGTaGCTCCAGGCTGGGACATGC +
Preference number: 2 (lower is better)
Translates to: AMHMFRDPHTGDLPWTGMGPQKV*LQAGTC
Trigger: GCATGTCCCAGCCTGGAGCCACACCTTCTGAGGCCC...CATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
3UTR-3UTR CCA 90 bp GGGCCTTGCCCGAGGTCACCCAGGGAGTGGCTTGCTGGAGCCCTGGGAATAACAGGGCCTCAGAAGGTGTaGCTCCAGGCTGGGACATGC +
Preference number: 2 (lower is better)
Translates to: GPCPRSPREWLAGALGITGPQKV*LQAGTC
Trigger: GCATGTCCCAGCCTGGAGCCACACCTTCTGAGGCCC...TGTTATTCCCAGGGCTCCAGCAAGCCACTCCCTGGGTGACCTCGGGCAAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCTTCCTGCCGTCCCAGTaGGCTCTGGTAGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCFLPSQ*ALVGPG
Trigger: GCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAA...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
3UTR-3UTR TCA 90 bp CCAGGTCTTCCCCCAACCTCACAATGGCCCCGTGATGCAGGCAGGCAGGCGAGTGTGGGTTCAGGAGGTTaGGCCACTAGGCAGTCAGCC +
Preference number: 2 (lower is better)
Translates to: PGLPPTSQWPRDAGRQASVGSGG*ATRQSA
Trigger: GGCTGACTGCCTAGTGGCTCAACCTCCTGAACCCAC...ACTCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAGGTTGGGGGAAGACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR GCA 90 bp GGAGCCCTGGGAATAACAGTCCCACACAAGGCTCTCTCCCTCCGCAGCTGGACCGCCACCTGGTACTGGTaGACCGACCAGGTGAGTGCC +
Preference number: 2 (lower is better)
Translates to: GALGITVPHKALSLRSWTATWYW*TDQVSA
Trigger: GGCACTCACCTGGTCGGTGCACCAGTACCAGGTGGC...GGTCCAGCTGCGGAGGGAGAGAGCCTTGTGTGGGACTGTTATTCCCAGGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR GCA 90 bp CCAGGTCTTCCCCCAACCTCACAATGGCCCCGTGATGCAGGCAGGCAGGCGAGTCACTGCCCGGCACTGTaGAGGATTCATGCCGTTGGG +
Preference number: 2 (lower is better)
Translates to: PGLPPTSQWPRDAGRQASHCPAL*RIHAVG
Trigger: CCCAACGGCATGAATCCTGCACAGTGCCGGGCAGTG...ACTCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAGGTTGGGGGAAGACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CCA 90 bp GGAGCCCTGGGAATAACAGTCCCACACAAGGCTCTCTCCCTCCGCAGCTGGACCCCTCAGGGACTGCCCTaGCTGGTAGAGGCTACCCAC +
Preference number: 2 (lower is better)
Translates to: GALGITVPHKALSLRSWTPQGLP*LVEATH
Trigger: GTGGGTAGCCTCTACCAGCCAGGGCAGTCCCTGAGG...GGTCCAGCTGCGGAGGGAGAGAGCCTTGTGTGGGACTGTTATTCCCAGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CAA 90 bp CCTTTGGAGTCTGGCACTGCCCGGCACTGTGCAGGATTCATGCCGTaGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTGGGTTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: PLESGTARHCAGFMP*GFWVASLGVGGFRR
Trigger: CCTCCTGAACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCATGAATCCTGCACAGTGCCGGGCAGTGCCAGACTCCAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR GCA 90 bp ACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCCACCGACCAGGTGAGTaGCAACGTCTCCCGCCCATC +
Preference number: 2 (lower is better)
Translates to: TCHVQTPCTCFETPTQGTHRPGE*QRLPPI
Trigger: GATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTG...GGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
3UTR-3UTR GCA 90 bp ACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCGCCACCTGGTACTGGTaGACCGACCAGGTGAGTGCC +
Preference number: 2 (lower is better)
Translates to: TCHVQTPCTCFETPTQGTATWYW*TDQVSA
Trigger: GGCACTCACCTGGTCGGTGCACCAGTACCAGGTGGC...GGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
3UTR-3UTR GCA 90 bp CTGGGCTGGAACTTCTACCTCTCCACCATCCTCACGCTCGGCATCACAGCCCTGAGAGGCTACCCACCCTaGTGCCCCGCTGTTACCAGC +
Preference number: 2 (lower is better)
Translates to: LGWNFYLSTILTLGITALRGYPP*CPAVTS
Trigger: GCTGGTAACAGCGGGGCAGCAGGGTGGGTAGCCTCT...CAGGGCTGTGATGCCGAGCGTGAGGATGGTGGAGAGGTAGAAGTTCCAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR GCA 90 bp GGGCCTTGCCCGAGGTCACCCAGGGAGTGGCTTGCTGGAGCCCTGGGAATAACATCTACACGGACGCCCTaGAGACGCTCATCATGGTGG +
Preference number: 2 (lower is better)
Translates to: GPCPRSPREWLAGALGITSTRTP*RRSSWW
Trigger: CCACCATGATGAGCGTCTGCAGGGCGTCCGTGTAGA...TGTTATTCCCAGGGCTCCAGCAAGCCACTCCCTGGGTGACCTCGGGCAAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CCA 90 bp GGAGCCCTGGGAATAACAGTCCCACACAAGGCTCTCTCCCTCCGCAGCTGGACCCGCTGTTACCAGCTCTaGCCCTGGCAAGGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: GALGITVPHKALSLRSWTRCYQL*PWQGAD
Trigger: GTCAGCTCCTTGCCAGGGCCAGAGCTGGTAACAGCG...GGTCCAGCTGCGGAGGGAGAGAGCCTTGTGTGGGACTGTTATTCCCAGGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR GCA 90 bp CCAGGTCTTCCCCCAACCTCACAATGGCCCCGTGATGCAGGCAGGCAGGCGAGTATCCAGGCAGCAGGCTaGCTCTTCCATGTCCCACTT +
Preference number: 2 (lower is better)
Translates to: PGLPPTSQWPRDAGRQASIQAAG*LFHVPL
Trigger: AAGTGGGACATGGAAGAGGCAGCCTGCTGCCTGGAT...ACTCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAGGTTGGGGGAAGACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR TCA 90 bp CAGCAGGGAGGTCCACCCAGGGGACGTGTAAAGGGGTCAGAAGGCCACCTCCCCGGTAGACAGGAACAGTaGGGTGTTTTGGACTGGAGA +
Preference number: 2 (lower is better)
Translates to: QQGGPPRGRVKGSEGHLPGRQEQ*GVLDWR
Trigger: TCTCCAGTCCAAAACACCTCACTGTTCCTGTCTACC...GGGGAGGTGGCCTTCTGACCCCTTTACACGTCCCCTGGGTGGACCTCCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR GCA 90 bp ACAGCCCTGTACACCATCGCAGGTATGGTGCCTGCAGCAGGGAGGTCCACCCAGCACGTACAGACGCCATaGACATGTTTCGAGACCCCC +
Preference number: 2 (lower is better)
Translates to: TALYTIAGMVPAAGRSTQHVQTP*TCFETP
Trigger: GGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTG...CTGGGTGGACCTCCCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR GCA 90 bp CCAGGTCTTCCCCCAACCTCACAATGGCCCCGTGATGCAGGCAGGCAGGCGAGTAGCGGGACACTGGGGTaGCCATGTGCAAAATGCTTA +
Preference number: 2 (lower is better)
Translates to: PGLPPTSQWPRDAGRQASSGTLG*PCAKCL
Trigger: TAAGCATTTTGCACATGGGCACCCCAGTGTCCCGCT...ACTCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAGGTTGGGGGAAGACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR GCA 90 bp ATGCCGTTGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTGGGTTCAGGAGGTTGGGTGATGCTACCTCCTaGAGGACAAAGGCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: MPLGFWVASLGVGGFRRLGDATS*RTKARE
Trigger: CTCCCTGGCCTTTGTCCTGCAGGAGGTAGCATCACC...CAACCTCCTGAACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CCA 90 bp AGGTCACCCAGGGAGTGGCTTGCTGGAGCCCTGGGAATAACAGTCCCACACAAGTACCAGCTCTGGCCCTaGCAAGGAGCTGACTCAGGA +
Preference number: 2 (lower is better)
Translates to: RSPREWLAGALGITVPHKYQLWP*QGADSG
Trigger: TCCTGAGTCAGCTCCTTGCCAGGGCCAGAGCTGGTA...CTTGTGTGGGACTGTTATTCCCAGGGCTCCAGCAAGCCACTCCCTGGGTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CCA 90 bp GGGCCTTGCCCGAGGTCACCCAGGGAGTGGCTTGCTGGAGCCCTGGGAATAACATTGTGCACATCTGCCTaGGCTGGAACTTCTACCTCT +
Preference number: 2 (lower is better)
Translates to: GPCPRSPREWLAGALGITLCTSA*AGTSTS
Trigger: AGAGGTAGAAGTTCCAGCCCAGGCAGATGTGCACAA...TGTTATTCCCAGGGCTCCAGCAAGCCACTCCCTGGGTGACCTCGGGCAAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR TCA 90 bp CACTGGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAATGGCACTTGTTCATTCTTGCCCAAGGCCGATaGGTGTCCAGAGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: HWDPVAEQFLTLEWHLFILAQGR*VSRGQQ
Trigger: CTGTTGGCCTCTGGACACTCATCGGCCTTGGGCAAG...AATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CCA 90 bp TGCCTGGGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGGTGGTTACGGGCAGCTaGAGGCAGCCTACGCCCAGG +
Preference number: 2 (lower is better)
Translates to: CLGSSSNCLKACTKCQEVVVTGS*RQPTPR
Trigger: CCTGGGCGTAGGCTGCCTCCAGCTGCCCGTAACCAC...CACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CCA 90 bp CAGCAGGGAGGTCCACCCAGGGGACGTGTAAAGGGGTCAGAAGGCCACCTCCCCTTTCTAACCCTTGAATaGCACTTGTTCATTTGCTCT +
Preference number: 2 (lower is better)
Translates to: QQGGPPRGRVKGSEGHLPFLTLE*HLFICS
Trigger: AGAGCAAATGAACAAGTGCCATTCAAGGGTTAGAAA...GGGGAGGTGGCCTTCTGACCCCTTTACACGTCCCCTGGGTGGACCTCCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CAA 90 bp TTTTGCTTCCTTGAATCGACAATCGGAAACCTGGCTGAGAACCACTaGCCCAAGGCCGATGAGTGTCCAGAGGCCAACAGTGACTCCTGC +
Preference number: 2 (lower is better)
Translates to: FCFLESTIGNLAENH*PKADECPEANSDSC
Trigger: GCAGGAGTCACTGTTGGCCTCTGGACACTCATCGGCCTTGGGCAAGTGGTTCTCAGCCAGGTTTCCGATTGTCGATTCAAGGAAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CCA 90 bp CACTGGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAATGGCACTTGTTCATTACCATCATGGCCACCTaGTACTGGTGCACCGACCAG +
Preference number: 2 (lower is better)
Translates to: HWDPVAEQFLTLEWHLFITIMAT*YWCTDQ
Trigger: CTGGTCGGTGCACCAGTACCAGGTGGCCATGATGGT...AATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR TCA 90 bp TGTACAAAATGCCAAGAGGTGATGCTACCTCCTGCAGGACAAAGGCCAGGGAGGCTTGTTCATTTGCTCTaGGCCTCACACAAACCCTCG +
Preference number: 2 (lower is better)
Translates to: CTKCQEVMLPPAGQRPGRLVHLL*ASHKPS
Trigger: CGAGGGTTTGTGTGAGGCTCAGAGCAAATGAACAAG...CCTCCCTGGCCTTTGTCCTGCAGGAGGTAGCATCACCTCTTGGCATTTTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CCA 90 bp GGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGATGCTACTGTGCCTCAGGGGGTaGGGCCACATCACCACCAGC +
Preference number: 2 (lower is better)
Translates to: GSSSNCLKACTKCQEVMLLCLRG*GHITTS
Trigger: GCTGGTGGTGATGTGGCCCCACCCCCTGAGGCACAG...TAGCATCACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CAA 90 bp CACTGGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAATGGCACTaGTTCATTTGCTCTGAGCCTCACACAAACCCTCGGTCTGAATAC +
Preference number: 2 (lower is better)
Translates to: HWDPVAEQFLTLEWH*FICSEPHTNPRSEY
Trigger: GTATTCAGACCGAGGGTTTGTGTGAGGCTCAGAGCAAATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR TCA 90 bp CACTGGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAATGGCACTTGTTCATTTCTGAATACAGAGCCTaGCCTGAGCTCCATGGGAAC +
Preference number: 2 (lower is better)
Translates to: HWDPVAEQFLTLEWHLFISEYRA*PELHGN
Trigger: GTTCCCATGGAGCTCAGGTCAGGCTCTGTATTCAGA...AATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CCA 90 bp CACTGGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAATGGCACTTGTTCATTTGGTCTATATGGTCTTaGTGGAGGCCCCATCCCTCT +
Preference number: 2 (lower is better)
Translates to: HWDPVAEQFLTLEWHLFIWSIWS*WRPHPS
Trigger: AGAGGGATGGGGCCTCCACCAAGACCATATAGACCA...AATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR TCA 90 bp GGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGATGCTAGACCCCTCCAGCTTTTaGCCAGATCGGTGGTTACGG +
Preference number: 2 (lower is better)
Translates to: GSSSNCLKACTKCQEVMLDPSSF*PDRWLR
Trigger: CCGTAACCACCGATCTGGTCAAAAGCTGGAGGGGTC...TAGCATCACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CCA 90 bp GGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGATGCTACGACAATCGGAAACCTaGCTGAGAACCACTTGCCCA +
Preference number: 2 (lower is better)
Translates to: GSSSNCLKACTKCQEVMLRQSET*LRTTCP
Trigger: TGGGCAAGTGGTTCTCAGCCAGGTTTCCGATTGTCG...TAGCATCACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CAA 90 bp CCTCAGGAAGGTCCTCAAATGTCAAGAAAAATTACTTTTGCTTCCTaGAATCGACAATCGGAAACCTGGCTGAGAACCACTTGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: PQEGPQMSRKITFAS*NRQSETWLRTTCPR
Trigger: CCTTGGGCAAGTGGTTCTCAGCCAGGTTTCCGATTGTCGATTCAAGGAAGCAAAAGTAATTTTTCTTGACATTTGAGGACCTTCCTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR GCA 72 bp GTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTaGCCTCCGCGTCATGAGTCTGGGCTGGGGCCTCAG +
Preference number: 3 (lower is better)
Translates to: VPVGSGRPRRPV*PPRHESGLGPQ
Trigger: CTGAGGCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
3UTR CCA 72 bp ACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTaGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTC +
Preference number: 3 (lower is better)
Translates to: TSPAHPTFLPSQ*ALVGPGGLSAL
Trigger: GAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
3UTR GCA 72 bp GGGACTGCCCTGGCTGGTAGAGGCTACCCACCCTGCTaGCCCGCTGTTACCAGCTCTGGCCCTGGCAAGGAG +
Preference number: 3 (lower is better)
Translates to: GTALAGRGYPPC*PAVTSSGPGKE
Trigger: CTCCTTGCCAGGGCCAGAGCTGGTAACAGCGGGGCAGCAGGGTGGGTAGCCTCTACCAGCCAGGGCAGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR GCA 72 bp CCTTATCCACAGGCCACCGAGGCCCAGAGAGGGCCTTaGCCGAGGTCACCCAGGGAGTGGCTTGCTGGAGCC +
Preference number: 3 (lower is better)
Translates to: PYPQATEAQRGP*PRSPREWLAGA
Trigger: GGCTCCAGCAAGCCACTCCCTGGGTGACCTCGGGCAAGGCCCTCTCTGGGCCTCGGTGGCCTGTGGATAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR GCA 72 bp TCAGGGACTGCCCTGGCTGGTAGAGGCTACCCACCCTaGTGCCCCGCTGTTACCAGCTCTGGCCCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: SGTALAGRGYPP*CPAVTSSGPGK
Trigger: CTTGCCAGGGCCAGAGCTGGTAACAGCGGGGCAGCAGGGTGGGTAGCCTCTACCAGCCAGGGCAGTCCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 72 bp GTGGCCATGGCGGGGCTGTCCCCACAGCGAGCCCTTTaGAGTCTGGCACTGCCCGGCACTGTGCAGGATTCA +
Preference number: 3 (lower is better)
Translates to: VAMAGLSPQRAL*SLALPGTVQDS
Trigger: TGAATCCTGCACAGTGCCGGGCAGTGCCAGACTCCAAAGGGCTCGCTGTGGGGACAGCCCCGCCATGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR TCA 72 bp GCCCCGCTGTTACCAGCTCTGGCCCTGGCAAGGAGCTaGCTCAGGAACTCAGGGCCAGCCACACCCGCATTG +
Preference number: 3 (lower is better)
Translates to: APLLPALALARS*LRNSGPATPAL
Trigger: CAATGCGGGTGTGGCTGGCCCTGAGTTCCTGAGTCAGCTCCTTGCCAGGGCCAGAGCTGGTAACAGCGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 72 bp CGCTCGGCATCACAGCCCTGTACACCATCGCAGGTATaGTGCCTGCAGCAGGGAGGTCCACCCAGGGGACGT +
Preference number: 3 (lower is better)
Translates to: RSASQPCTPSQV*CLQQGGPPRGR
Trigger: ACGTCCCCTGGGTGGACCTCCCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGTGATGCCGAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 72 bp GCCGTTGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTaGGTTCAGGAGGTTGAGCCACTAGGCAGTCAGCCC +
Preference number: 3 (lower is better)
Translates to: AVGVLGSIAGSG*VQEVEPLGSQP
Trigger: GGGCTGACTGCCTAGTGGCTCAACCTCCTGAACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 72 bp GCCCGGCACTGTGCAGGATTCATGCCGTTGGGGTTCTaGGTAGCATCGCTGGGAGTGGGTGGGTTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: ARHCAGFMPLGF*VASLGVGGFRR
Trigger: CCTCCTGAACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCATGAATCCTGCACAGTGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR GCA 72 bp TCGGCATCACAGCCCTGTACACCATCGCAGGTATGGTaGCTGCAGCAGGGAGGTCCACCCAGGGGACGTGTA +
Preference number: 3 (lower is better)
Translates to: SASQPCTPSQVW*LQQGGPPRGRV
Trigger: TACACGTCCCCTGGGTGGACCTCCCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGTGATGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 72 bp CTCCAGCTTTTGACCAGATCGGTGGTTACGGGCAGCTaGAGGCAGCCTACGCCCAGGCCATTCCCTCCAGGA +
Preference number: 3 (lower is better)
Translates to: LQLLTRSVVTGS*RQPTPRPFPPG
Trigger: TCCTGGAGGGAATGGCCTGGGCGTAGGCTGCCTCCAGCTGCCCGTAACCACCGATCTGGTCAAAAGCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CAA 90 bp GAGCCTGACCTGAGCTCCATGGGAACAGTGATGCTGGGGAGACCAGCATCCAGGGGAAAAAGCCCCGGCTaGAGCCCGCCAGATGGTCTA +
Preference number: 3 (lower is better)
Translates to: EPDLSSMGTVMLGRPASRGKSPG*SPPDGL
Trigger: TAGACCATCTGGCGGGCTCAAGCCGGGGCTTTTTCC...CCTGGATGCTGGTCTCCCCAGCATCACTGTTCCCATGGAGCTCAGGTCAGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CAA 90 bp GGCCAGGTCTTCCCCCAACCTCACAATGGCCCCGTGATGCAGGCAGGCAGGCGAGAGAGCTGGGAGAGATaGGCGATACTAGTCTGGAAC +
Preference number: 3 (lower is better)
Translates to: GQVFPQPHNGPVMQAGRRESWER*AILVWN
Trigger: GTTCCAGACTAGTATCGCCAATCTCTCCCAGCTCTC...TCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAGGTTGGGGGAAGACCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR-3UTR CAA 90 bp CTGGACCTGTACGCGGGGGCTCTGTTTGTGCACATCTGCCTGGGCTGGAACTTCGCATTGGCTCAGCGCTaGATGGTGAGGTGGGGCTGT +
Preference number: 3 (lower is better)
Translates to: LDLYAGALFVHICLGWNFALAQR*MVRWGC
Trigger: ACAGCCCCACCTCACCATCAAGCGCTGAGCCAATGC...GAAGTTCCAGCCCAGGCAGATGTGCACAAACAGAGCCCCCGCGTACAGGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR GCA 72 bp AGCGAGCCCTTTGGAGTCTGGCACTGCCCGGCACTGTaGAGGATTCATGCCGTTGGGGTTCTGGGTAGCATC +
Preference number: 3 (lower is better)
Translates to: SEPFGVWHCPAL*RIHAVGVLGSI
Trigger: GATGCTACCCAGAACCCCAACGGCATGAATCCTGCACAGTGCCGGGCAGTGCCAGACTCCAAAGGGCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 72 bp ACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTaGTACTGGTGCACCGACCAGGTGAGTGCCAACGTC +
Preference number: 3 (lower is better)
Translates to: TGMTFGLTIMAT*YWCTDQVSANV
Trigger: GACGTTGGCACTCACCTGGTCGGTGCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
3UTR TCA 72 bp AAACTGTCCCTGTTCCACCCTGACCCCTCCAGCTTTTaGCCAGATCGGTGGTTACGGGCAGCTGGAGGCAGC +
Preference number: 3 (lower is better)
Translates to: KLSLFHPDPSSF*PDRWLRAAGGS
Trigger: GCTGCCTCCAGCTGCCCGTAACCACCGATCTGGTCAAAAGCTGGAGGGGTCAGGGTGGAACAGGGACAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR GCA 72 bp CTGGACCTGTACGCGGGGGCTCTGTTTGTGCACATCTaGCTGGGCTGGAACTTCTACCTCTCCACCATCCTC +
Preference number: 3 (lower is better)
Translates to: LDLYAGALFVHI*LGWNFYLSTIL
Trigger: GAGGATGGTGGAGAGGTAGAAGTTCCAGCCCAGGCAGATGTGCACAAACAGAGCCCCCGCGTACAGGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR TCA 72 bp CAGATAGGAAACTCACAGGGCTGCCCGGAGAGAGCGTaGGCTCACCGTCCCTGGAAGTATGTAAGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: QIGNSQGCPERA*AHRPWKYVSRA
Trigger: GGCTCTGCTTACATACTTCCAGGGACGGTGAGCTCACGCTCTCTCCGGGCAGCCCTGTGAGTTTCCTATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 72 bp ATAACAGTCCCACACAAGGCTCTCTCCCTCCGCAGCTaGACCTGTACGCGGGGGCTCTGTTTGTGCACATCT +
Preference number: 3 (lower is better)
Translates to: ITVPHKALSLRS*TCTRGLCLCTS
Trigger: AGATGTGCACAAACAGAGCCCCCGCGTACAGGTCCAGCTGCGGAGGGAGAGAGCCTTGTGTGGGACTGTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR TCA 72 bp GAGCCTCACACAAACCCTCGGTCTGAATACAGAGCCTaGCCTGAGCTCCATGGGAACAGTGATGCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: EPHTNPRSEYRA*PELHGNSDAGE
Trigger: CTCCCCAGCATCACTGTTCCCATGGAGCTCAGGTCAGGCTCTGTATTCAGACCGAGGGTTTGTGTGAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR TCA 72 bp TGCAGACGCTCATCATGGTGGTGGGGGCTGTCATCCTaGCAATCAAAGGTGAGGACAGAGTCTGTGGCCATG +
Preference number: 3 (lower is better)
Translates to: CRRSSWWWGLSS*QSKVRTESVAM
Trigger: CATGGCCACAGACTCTGTCCTCACCTTTGATTGTCAGGATGACAGCCCCCACCACCATGATGAGCGTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 72 bp CCATGTCCCACTTGGAAAAGGCTAGGGAGTAGGGCCTaGGGTGGAAACGGGTTTTCCTACATCCAGGCTTCT +
Preference number: 3 (lower is better)
Translates to: PCPTWKRLGSRA*GGNGFSYIQAS
Trigger: AGAAGCCTGGATGTAGGAAAACCCGTTTCCACCCCAGGCCCTACTCCCTAGCCTTTTCCAAGTGGGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 72 bp TGGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAATaGCACTTGTTCATTTGCTCTGAGCCTCACACAAAC +
Preference number: 3 (lower is better)
Translates to: WDPVAEQFLTLE*HLFICSEPHTN
Trigger: GTTTGTGTGAGGCTCAGAGCAAATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 72 bp ATTACTTTTGCTTCCTTGAATCGACAATCGGAAACCTaGCTGAGAACCACTTGCCCAAGGCCGATGAGTGTC +
Preference number: 3 (lower is better)
Translates to: ITFASLNRQSET*LRTTCPRPMSV
Trigger: GACACTCATCGGCCTTGGGCAAGTGGTTCTCAGCCAGGTTTCCGATTGTCGATTCAAGGAAGCAAAAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR GCA 72 bp GAGCAGTTTCTAACCCTTGAATGGCACTTGTTCATTTaGTCTGAGCCTCACACAAACCCTCGGTCTGAATAC +
Preference number: 3 (lower is better)
Translates to: EQFLTLEWHLFI*SEPHTNPRSEY
Trigger: GTATTCAGACCGAGGGTTTGTGTGAGGCTCAGAGCAAATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CCA 72 bp GAACAAATCTCTAAAGACTCTTCCAGACTCAGACACTaGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAA +
Preference number: 3 (lower is better)
Translates to: EQISKDSSRLRH*DPVAEQFLTLE
Trigger: TTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCAGTGTCTGAGTCTGGAAGAGTCTTTAGAGATTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCCCCATCCGCCCCGCTaGCTTCCTCGCCGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: PAVPVGSGRPRRPVCPPRPHPPR*LPRRRR
Trigger: TCGGCGACGGCGAGGAAGCCAGCGGGGCGGATGGGG...ACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCACAGAGGAAGCCACTaGGGGCCGTCGGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PTFLPSQWALVGPGGLSAHRGSH*GPSGAR
Trigger: CCTGGCCCCCGACGGCCCTCAGTGGCTTCCTCTGTG...GGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp TCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGAGAGAAGGCCATaGCGCCGCCTGCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SRPSHLPAVPVGSGRPRRPERRP*RRLPGH
Trigger: GTGCCCGGGCAGGCGGCGCCATGGCCTTCTCTCAGG...CCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp TCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGGGGCCAGGGCACCCTTaGACTTGGTTGCCGACCGCG +
Preference number: 4 (lower is better)
Translates to: SRPSHLPAVPVGSGRPRRGPGHP*TWLPTA
Trigger: CGCGGTCGGCAACCAAGTTCAAGGGTGCCCTGGCCC...CCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp GGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCCTCTGCCCTCCGCGTCATaGGTCTGGGCTGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GRPRRPVCPPRHESGLGPLPSAS*VWAGAS
Trigger: TGAGGCCCCAGCCCAGACTCATGACGCGGAGGGCAG...AGGCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp GCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGGTGCACCGACCAGGTaGGTGCCAACGTCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: AVPVGSGRPRRPVCPPRHGAPTR*VPTSPA
Trigger: GGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACC...ATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGGCTTCTTGGCCACAGTaGCCGCGGGCACCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: PSQWALVGPGGLSALRVMASWPQ*PRAPGG
Trigger: TCCCCCTGGTGCCCGCGGGCACTGTGGCCAAGAAGC...CATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCGGCCACGGCCGGAGCTaGCTGAGTGGCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LVGPGGLSALRVMSLGWGGHGRS*LSGCPG
Trigger: ACCAGGACAGCCACTCAGGCAGCTCCGGCCGTGGCC...GCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCGGCCCGTTGGCCACTTaGTCTGAGTGGCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PTFLPSQWALVGPGGLSAGPLAT*SEWRLR
Trigger: CCGGAGGCGCCACTCAGAGCAAGTGGCCAACGGGCC...GGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp GCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGGGCCAGTCTTGGGCTaGCGGGATCCGGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AVPVGSGRPRRPVCPPRHGPVLG*RDPEAG
Trigger: GCCTGCTTCCGGATCCCGGCAGCCCAAGACTGGCCC...ATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCCTCGGGGAGTTCCCCTaGATGCTCAGCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LPSQWALVGPGGLSALRVLGEFP*MLSQRW
Trigger: CCAGCGCTGGCTGAGCATCCAGGGGAACTCCCCGAG...GACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCGCGCGGTGGTGGGGTTaGCCCGTTGGCCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: LVGPGGLSALRVMSLGWGARWWG*PVGHLL
Trigger: GAGCAAGTGGCCAACGGGCCAACCCCACCACCGCGC...GCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTCGTGTCCCTCCTCCCTaGGGCCAGGGCCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HPTFLPSQWALVGPGGLSRVPPP*GQGPLQ
Trigger: CTGGAGGGGGCCCTGGCCCCAGGGAGGAGGGACACG...AGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp GGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCCTCTGCTTCTCTGCCCATaGGCAATCGGGGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GRPRRPVCPPRHESGLGPLLLCP*AIGEGG
Trigger: CCCGCCCTCCCCGATTGCTCATGGGCAGAGAAGCAG...AGGCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345041.4
CDS-3UTR TCA 90 bp CCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTTCCAGACACTGCACCTaGGAGAAGGCCATGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PAVPVGSGRPRRPVCPPRSRHCT*EKAMAP
Trigger: CGGCGCCATGGCCTTCTCTCAGGTGCAGTGTCTGGA...ACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGACGGCCGGAGCTGCCTaGGTGGCTGTCCTGGTCACT +
Preference number: 4 (lower is better)
Translates to: PSQWALVGPGGLSALRVMTAGAA*VAVLVT
Trigger: AGTGACCAGGACAGCCACTCAGGCAGCTCCGGCCGT...CATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp GGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCCTGTTGGCCACTTGCTCTaGGTGGCGCCTCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GRPRRPVCPPRHESGLGPVGHLL*VAPPER
Trigger: CCTCTCCGGAGGCGCCACTCAGAGCAAGTGGCCAAC...AGGCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp TCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCAGCAGGCGGGGTACCTaGCCTCCCTTGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SHLPAVPVGSGRPRRPVCSRRGT*PPLACQ
Trigger: CTGGCAGGCCAAGGGAGGTCAGGTACCCCGCCTGCT...GCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCTGCCCGGAGAGAGCGTaGGCTCACCGTCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LVGPGGLSALRVMSLGWGCPERA*AHRPWK
Trigger: CTTCCAGGGACGGTGAGCTCACGCTCTCTCCGGGCA...GCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp GGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCCTGGGAGTTCCCCTGGATaGTCAGCCAGCGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GRPRRPVCPPRHESGLGPGSSPG*SASAGP
Trigger: AGGCCCAGCGCTGGCTGAGCATCCAGGGGAACTCCC...AGGCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp GGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCCTAGCCCAGGATGTCGCTaGCAGGCTCCGGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GRPRRPVCPPRHESGLGPSPGCR*QAPGLA
Trigger: AGCCAGACCCGGAGCCTGGCAGCGACATCCTGGGCT...AGGCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTGCCACCTGGTACTGGTaGACCGACCAGGTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: PAVPVGSGRPRRPVCPPRATWYW*TDQVSA
Trigger: GGCACTCACCTGGTCGGTGCACCAGTACCAGGTGGC...ACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCCATCCGCCCCGCTaGCTTCCTCGCCGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: VHRPGECQRLPPIPPSCRPHPPR*LPRRRR
Trigger: TCGGCGACGGCGAGGAAGCCAGCGGGGCGGATGGGG...ACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGGGCCTGCCCGTCTATaGGGGGCTGCATGTAGACGC +
Preference number: 4 (lower is better)
Translates to: AVPVGSGRPRRPVCPPRHGPARL*GAACRR
Trigger: GCGTCTACATGCAGCCCCCCATAGACGGGCAGGCCC...ATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTGCCCCAGGGGCTTCTTaGCCTCCTGCTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PAVPVGSGRPRRPVCPPRAPGAS*PPASQR
Trigger: CCTCTGAGAAGCAGGAGGCCAAGAAGCCCCTGGGGC...ACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCTCCTGGGTGGATGGGTaGCAGCAGCTCGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LPSQWALVGPGGLSALRVSWVDG*QQLGEF
Trigger: GAACTCCCCGAGCTGCTGCCACCCATCCACCCAGGA...GACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCCTGGGACCCACCGCATGAGAGGGATCCCAGCAGCCAGGCCCAGTCTGGAAGGGCCAGGCTCCGGGTCTaGCTCCACCCACGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PWDPPHERDPSSQAQSGRARLRV*LHPRGQ
Trigger: CTGCCCACGTGGGTGGAGCCAGACCCGGAGCCTGGC...CCTTCCAGACTGGGCCTGGCTGCTGGGATCCCTCTCATGCGGTGGGTCCCAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTGTGGGGTTGGCCCGTTaGCCACTTGCTCTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: PAVPVGSGRPRRPVCPPRVGLAR*PLALSG
Trigger: GCCACTCAGAGCAAGTGGCCAACGGGCCAACCCCAC...ACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp AGTGTCCCTGGGACCCACCGCATGAGAGGGATCCCAGCAGCCAGGCCCAGTCTGCTGCCGGCGCGGTGGTaGGGTTGGCCCGTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SVPGTHRMRGIPAARPSLLPARW*GWPVGH
Trigger: GTGGCCAACGGGCCAACCCCACCACCGCGCCGGCAG...CAGACTGGGCCTGGCTGCTGGGATCCCTCTCATGCGGTGGGTCCCAGGGACACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GGCCAGGTCTTCCCCCAACCTCACAATGGCCCCGTGATGCAGGCAGGCAGGCGACAGCTGCCGGCGCGGTaGTGGGGTTGGCCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: GQVFPQPHNGPVMQAGRRQLPAR*WGWPVG
Trigger: GCCAACGGGCCAACCCCACCACCGCGCCGGCAGCTG...TCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAGGTTGGGGGAAGACCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp CCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCCTCCGGAGAGGGACTaGGTGCTCTCTCACCTCGAA +
Preference number: 4 (lower is better)
Translates to: PAVPVGSGRPRRPVCPPRPPERD*VLSHLE
Trigger: TTCGAGGTGAGAGAGCACTCAGTCCCTCTCCGGAGG...ACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTGTCCCTGTTCCACCCTaGCCCCTCCAGCTTTTGACC +
Preference number: 4 (lower is better)
Translates to: PAVPVGSGRPRRPVCPPRVPVPP*PLQLLT
Trigger: GGTCAAAAGCTGGAGGGGTCAGGGTGGAACAGGGAC...ACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp GGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCGGCCATGCCGGGCCCTaGCCCCGAGGTAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: GECQRLPPIPPSCRPSGLGHAGP*PRGRQE
Trigger: TTCCTGTCTACCTCGGGGTCAGGGCCCGGCATGGCC...GAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp CCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGGCCCTGGCAAGGAGCTaGCTCAGGAACTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PSQWALVGPGGLSALRVMALARS*LRNSGP
Trigger: TGGCCCTGAGTTCCTGAGTCAGCTCCTTGCCAGGGC...CATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp TCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCTCACAATGGCCCCGTaGTGCAGGCAGGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: SHLPAVPVGSGRPRRPVCLTMAP*CRQAGE
Trigger: CTCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAG...GCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp CTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCACACCACCTGCCACCTaGCACGTACAGACGCCATGC +
Preference number: 4 (lower is better)
Translates to: LPSQWALVGPGGLSALRVTPPAT*HVQTPC
Trigger: GCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTGT...GACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCGAGCGGTCCGACTTCTaGGGCCAGTACTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PTFLPSQWALVGPGGLSAERSDF*GQYSRE
Trigger: CTCCCTGGAGTACTGGCCCCAGAAGTCGGACCGCTC...GGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp TGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCGGTCCAGCTGCGGGATaGAGCGGTCCGACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: WALVGPGGLSALRVMSLGGPAAG*SGPTSG
Trigger: CCCAGAAGTCGGACCGCTCCATCCCGCAGCTGGACC...GCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGGCTGGGACACCGTCCTaGGGGGCACTGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: DAMHMFRDPHTGDLPWTGAGTPS*GALGSG
Trigger: CCCAGAGCCCAGTGCCCCCCAGGACGGTGTCCCAGC...CCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTGCTGGGACACCGTCCTaGGGGGCACTGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VHRPGECQRLPPIPPSCRAGTPS*GALGSG
Trigger: CCCAGAGCCCAGTGCCCCCCAGGACGGTGTCCCAGC...ACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCCTGGGCCTGCCATCCTaGGTAGCCTATGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LPSQWALVGPGGLSALRVLGLPS*VAYGLS
Trigger: GGACAGACCATAGGCTACCCAGGATGGCAGGCCCAG...GACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATGCTGCCGGCGCGGTGGTaGGGTTGGCCCGTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AMHMFRDPHTGDLPWTGMLPARW*GWPVGH
Trigger: GTGGCCAACGGGCCAACCCCACCACCGCGCCGGCAG...CATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CAGCAGGGAGGTCCACCCAGGGGACGTGTAAAGGGGTCAGAAGGCCACCTCCCCCCGACTCTGGGCCCATaGGGAGCCACCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QQGGPPRGRVKGSEGHLPPTLGP*GATLGS
Trigger: GGACCCCAGGGTGGCTCCCCATGGGCCCAGAGTCGG...GGGGAGGTGGCCTTCTGACCCCTTTACACGTCCCCTGGGTGGACCTCCCTGCTG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGTTGGCCTGCCAGTGGTaGGGGCCAGCCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ANVSRPSHLPAVPVGSGRLACQW*GPAMAG
Trigger: CCCAGCCATGGCTGGCCCCCACCACTGGCAGGCCAA...CCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp GTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTGGTTGCCGACCGCGTaGAGAACTCAGTTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: VPVGSGRPRRPVCPPRHEWLPTA*RTQFPR
Trigger: GCGGGGGAACTGAGTTCTTCACGCGGTCGGCAACCA...CTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCCTGCCCGGGCACTGCTaGCGGGGGTGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCLPGHC*RGWVGK
Trigger: CTTGCCCACCCACCCCCGGCAGCAGTGCCCGGGCAG...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CACGCTCGGCATCACAGCCCTGTACACCATCGCAGGTATGGTGCCTGCAGCAGGCTGCCCGGGCACTGCTaGCGGGGGTGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: HARHHSPVHHRRYGACSRLPGHC*RGWVGK
Trigger: CTTGCCCACCCACCCCCGGCAGCAGTGCCCGGGCAG...CCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGTGATGCCGAGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp CGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATGCTCCTCGGTGGCCCTaGCATCGGTCATGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RHAHVSRPPHRGPAVDRDAPRWP*HRSWGG
Trigger: CCCGCCCCATGACCGATGGCAGGGCCACCGAGGAGC...ATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCACACCACCTGCCACCTaGCACGTACAGACGCCATGC +
Preference number: 4 (lower is better)
Translates to: PTFLPSQWALVGPGGLSATPPAT*HVQTPC
Trigger: GCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTGT...GGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp GGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCCCCCTCCAGCAACCTTaGTTCCACTGGCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GECQRLPPIPPSCRPSGLPLQQP*FHWQGA
Trigger: GGCCCCCTGCCAGTGGAAGCAAGGTTGCTGGAGGGG...GAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp TGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTCCTGGGTGGATGGGTaGCAGCAGCTCGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: WALVGPGGLSALRVMSLGSWVDG*QQLGEF
Trigger: GAACTCCCCGAGCTGCTGCCACCCATCCACCCAGGA...GCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCAGGTGAAGCAGTCCTaGGTGGATGGGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PTFLPSQWALVGPGGLSAQVKQS*VDGWQQ
Trigger: CTGCTGCCACCCATCCACCCAGGACTGCTTCACCTG...GGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCTTCATCTGGCTGGGCTaGGGGTTCCAGATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LPSQWALVGPGGLSALRVFIWLG*GFQMLG
Trigger: CCCCAACATCTGGAACCCCCAGCCCAGCCAGATGAA...GACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp TCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCTCTCGGGGTCATCCTaGGTCACAGATAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SRPSHLPAVPVGSGRPRRLSGSS*VTDSCR
Trigger: GCGGCAGCTATCTGTGACCCAGGATGACCCCGAGAG...CCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp TGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCGCCACTTGCTCTGAGTaGCGCCTCCGGAGAGGGACT +
Preference number: 4 (lower is better)
Translates to: WALVGPGGLSALRVMSLGATCSE*RLRRGT
Trigger: AGTCCCTCTCCGGAGGCGCCACTCAGAGCAAGTGGC...GCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGCATGGGGAGCCACCCTaGGGTCCAACAAAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PSQWALVGPGGLSALRVMHGEPP*GPTKVP
Trigger: AGGGACCTTTGTTGGACCCCAGGGTGGCTCCCCATG...CATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTTCTCTTCCCCGACTCTaGGCCCATGGGGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: HPTFLPSQWALVGPGGLSSLPRL*AHGEPP
Trigger: GGGTGGCTCCCCATGGGCCCAGAGTCGGGGAAGAGA...AGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCTCCGATGAGGCCCACTaGCTACCGCCCGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LVHRPGECQRLPPIPPSCSDEAH*LPPVLA
Trigger: GGCCAGGACGGGCGGTAGCCAGTGGGCCTCATCGGA...GCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCGGTGTGGCTCCAGGCTaGGACATGCTGCTAGGGGTC +
Preference number: 4 (lower is better)
Translates to: TFLPSQWALVGPGGLSALGVAPG*DMLLGV
Trigger: GACCCCTAGCAGCATGTCCCAGCCTGGAGCCACACC...GAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GTGACACAGACACAGATGGGCCAGGGCTTGGCCATGCCGGGCCCTGACCCCGAGTTCCTGCCGTCCCAGTaGGCTCTGGTAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VTQTQMGQGLAMPGPDPEFLPSQ*ALVGPG
Trigger: GCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAA...CTCGGGGTCAGGGCCCGGCATGGCCAAGCCCTGGCCCATCTGTGTCTGTGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCACCATCATGGCCACCTaGTACTGGTGCACCGACCAG +
Preference number: 4 (lower is better)
Translates to: LPSQWALVGPGGLSALRVTIMAT*YWCTDQ
Trigger: CTGGTCGGTGCACCAGTACCAGGTGGCCATGATGGT...GACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCCTCCATCCACAAACATaGACTTCTGGGCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LPSQWALVGPGGLSALRVLHPQT*TSGPGH
Trigger: GTGCCCTGGCCCAGAAGTTCATGTTTGTGGATGGAG...GACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGGTGCGTACTTGGGGTTaGCGAGCTTCTTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: PSQWALVGPGGLSALRVMVRTWG*RASWPQ
Trigger: CTGTGGCCAAGAAGCTCGTCAACCCCAAGTACGCAC...CATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp ACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCTTGGCCCTCTCCAGGTaGAGCAGTCCTGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: TFLPSQWALVGPGGLSALLALSR*SSPGWM
Trigger: CATCCACCCAGGACTGCTTCACCTGGAGAGGGCCAA...GAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTAGGTGTCACGGATCTTaGTGCGGTTCATCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PAVPVGSGRPRRPVCPPRRCHGS*CGSSGW
Trigger: CCAGCCAGATGAACCGCATCAAGATCCGTGACACCT...ACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp GTACTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCAGCAGGCGGGGTACCTaGCCTCCCTTGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VLVHRPGECQRLPPIPPSSRRGT*PPLACQ
Trigger: CTGGCAGGCCAAGGGAGGTCAGGTACCCCGCCTGCT...GGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp TCCCTCCGCAGCTGGACCTGTACGCGGGGGCTCTGTTTGTGCACATCTGCCTGGGCTTCTTGGCCACAGTaGCCGCGGGCACCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SLRSWTCTRGLCLCTSAWASWPQ*PRAPGG
Trigger: TCCCCCTGGTGCCCGCGGGCACTGTGGCCAAGAAGC...CCAGGCAGATGTGCACAAACAGAGCCCCCGCGTACAGGTCCAGCTGCGGAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp CCAGGTCTTCCCCCAACCTCACAATGGCCCCGTGATGCAGGCAGGCAGGCGAGTGGCCCGTTGGCCACTTaGTCTGAGTGGCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PGLPPTSQWPRDAGRQASGPLAT*SEWRLR
Trigger: CCGGAGGCGCCACTCAGAGCAAGTGGCCAACGGGCC...ACTCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAGGTTGGGGGAAGACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp GACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGCCCAGGCGGCCTGTCTaGCCTCCGCGTCATGAGTCT +
Preference number: 4 (lower is better)
Translates to: DAMHMFRDPHTGDLPWTGPRRPV*PPRHES
Trigger: AGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGG...CCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTCGCAGGTATGGTGCCTaGAGCAGGGAGGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: HPTFLPSQWALVGPGGLSRRYGA*SREVHP
Trigger: TGGGTGGACCTCCCTGCTGCAGGCACCATACCTGCG...AGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCCCTGAGAGAAGGCCATaGCGCCGCCTGCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: ATYRRHAHVSRPPHRGPAPERRP*RRLPGH
Trigger: GTGCCCGGGCAGGCGGCGCCATGGCCTTCTCTCAGG...GGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCGAGCGGTCCGACTTCTaGGGCCAGTACTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GECQRLPPIPPSCRPSGLERSDF*GQYSRE
Trigger: CTCCCTGGAGTACTGGCCCCAGAAGTCGGACCGCTC...GAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp AGTGTCCCTGGGACCCACCGCATGAGAGGGATCCCAGCAGCCAGGCCCAGTCTGGGTCCAGCTGCGGGATaGAGCGGTCCGACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SVPGTHRMRGIPAARPSLGPAAG*SGPTSG
Trigger: CCCAGAAGTCGGACCGCTCCATCCCGCAGCTGGACC...CAGACTGGGCCTGGCTGCTGGGATCCCTCTCATGCGGTGGGTCCCAGGGACACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTGGGCCTGCCCGTCTATaGGGGGCTGCATGTAGACGC +
Preference number: 4 (lower is better)
Translates to: VHRPGECQRLPPIPPSCRGPARL*GAACRR
Trigger: GCGTCTACATGCAGCCCCCCATAGACGGGCAGGCCC...ACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGGCCCCAGGGGCTTCTTaGCCTCCTGCTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: ANVSRPSHLPAVPVGSGRAPGAS*PPASQR
Trigger: CCTCTGAGAAGCAGGAGGCCAAGAAGCCCCTGGGGC...CCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCTTGATGCGGTTCATCTaGCTGGGCTGGGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PTFLPSQWALVGPGGLSALMRFI*LGWGFQ
Trigger: CTGGAACCCCCAGCCCAGCCAGATGAACCGCATCAA...GGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCCGCTGGAGTGGGGCGTaGCCTGGGCCTGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: ATYRRHAHVSRPPHRGPARWSGA*PGPAIL
Trigger: CAGGATGGCAGGCCCAGGCCACGCCCCACTCCAGCG...GGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACAGCCCTGTACACCATCGCAGGTATGGTGCCTGCAGCAGGGAGGTCCACCCAGCGCTGGAGTGGGGCGTaGCCTGGGCCTGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: TALYTIAGMVPAAGRSTQRWSGA*PGPAIL
Trigger: CAGGATGGCAGGCCCAGGCCACGCCCCACTCCAGCG...CTGGGTGGACCTCCCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACAGCTGCCGGCGCGGTaGTGGGGTTGGCCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: PPATYRRHAHVSRPPHRGQLPAR*WGWPVG
Trigger: GCCAACGGGCCAACCCCACCACCGCGCCGGCAGCTG...TCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCCCGACTCTGGGCCCATaGGGAGCCACCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCPTLGP*GATLGS
Trigger: GGACCCCAGGGTGGCTCCCCATGGGCCCAGAGTCGG...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCCTGGGACCCACCGCATGAGAGGGATCCCAGCAGCCAGGCCCAGTCTGGAAGGAACAGTGACTCCTGCTaGGCCAGCGGGACACTGGGG +
Preference number: 4 (lower is better)
Translates to: PWDPPHERDPSSQAQSGRNSDSC*ASGTLG
Trigger: CCCCAGTGTCCCGCTGGCCCAGCAGGAGTCACTGTT...CCTTCCAGACTGGGCCTGGCTGCTGGGATCCCTCTCATGCGGTGGGTCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CCCTGGGACCCACCGCATGAGAGGGATCCCAGCAGCCAGGCCCAGTCTGGAAGGCCTCAGGGACTGCCCTaGCTGGTAGAGGCTACCCAC +
Preference number: 4 (lower is better)
Translates to: PWDPPHERDPSSQAQSGRPQGLP*LVEATH
Trigger: GTGGGTAGCCTCTACCAGCCAGGGCAGTCCCTGAGG...CCTTCCAGACTGGGCCTGGCTGCTGGGATCCCTCTCATGCGGTGGGTCCCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCAGGCAGGCAGGCGAGTaGGGGTCTCCCCTCCTTATC +
Preference number: 4 (lower is better)
Translates to: GECQRLPPIPPSCRPSGLRQAGE*GSPLLI
Trigger: GATAAGGAGGGGAGACCCCCACTCGCCTGCCTGCCT...GAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CAA 72 bp TGTGGCCATGGCGGGGCTGTCCCCACAGCGAGCCCTTaGGAGTCTGGCACTGCCCGGCACTGTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: CGHGGAVPTASP*ESGTARHCAGF
Trigger: GAATCCTGCACAGTGCCGGGCAGTGCCAGACTCCAAAGGGCTCGCTGTGGGGACAGCCCCGCCATGGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp ACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCCACAGAGGAAGCCACTaGGGGCCGTCGGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TCHVQTPCTCFETPTQGTHRGSH*GPSGAR
Trigger: CCTGGCCCCCGACGGCCCTCAGTGGCTTCCTCTGTG...GGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp GGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCCTTTTATCCCTAGTCCCTaGGGCAGGGACCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GRPRRPVCPPRHESGLGPFIPSP*GRDPVM
Trigger: CATCACAGGGTCCCTGCCTCAGGGACTAGGGATAAA...AGGCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCTTTATCCCTAGTCCCTaGGGCAGGGACCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: LVGPGGLSALRVMSLGWGFIPSP*GRDPVM
Trigger: CATCACAGGGTCCCTGCCTCAGGGACTAGGGATAAA...GCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTCCGTTTAGAATCCGATaGGGCCCACTGGCTACCGCC +
Preference number: 4 (lower is better)
Translates to: HPTFLPSQWALVGPGGLSPFRIR*GPLATA
Trigger: GGCGGTAGCCAGTGGGCCTCATCGGATTCTAAACGG...AGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp GTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGGACCCCTCCAGCTTTTaGCCAGATCGGTGGTTACGG +
Preference number: 4 (lower is better)
Translates to: VPVGSGRPRRPVCPPRHEDPSSF*PDRWLR
Trigger: CCGTAACCACCGATCTGGTCAAAAGCTGGAGGGGTC...CTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp CCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACCTGAGAGGGGCCCGTaGCCCGAGGGTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PPATCHVQTPCTCFETPTPERGP*PEGPQS
Trigger: GCTCTGAGGACCCTCGGGGCACGGGCCCCTCTCAGG...TGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp ATGCCGTTGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTGGGTTCAGGAGGTTGCCTGAGAGGGGCCCGTaGCCCGAGGGTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: MPLGFWVASLGVGGFRRLPERGP*PEGPQS
Trigger: GCTCTGAGGACCCTCGGGGCACGGGCCCCTCTCAGG...CAACCTCCTGAACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCCAGCCCAGGTCCAGCTaGGGGATGGAGCGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCQPRSS*GMERSD
Trigger: GTCGGACCGCTCCATCCCGCAGCTGGACCTGGGCTG...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp ACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGAAGCCCAGGATGTCGCTaGCAGGCTCCGGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TPCTCFETPTQGTCRGPGSPGCR*QAPGLA
Trigger: AGCCAGACCCGGAGCCTGGCAGCGACATCCTGGGCT...TCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp GTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTTGGGTCACAGATAGCTaGCGCTGGAGTGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: VHRPGECQRLPPIPPSCRWVTDS*RWSGAW
Trigger: CCACGCCCCACTCCAGCGGCAGCTATCTGTGACCCA...ACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp TCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCGTGGAGCGCTGGGCCTaGATCCTCTTCAACGCATCT +
Preference number: 4 (lower is better)
Translates to: SHLPAVPVGSGRPRRPVCVERWA*ILFNAS
Trigger: AGATGCGTTGAAGAGGATGCAGGCCCAGCGCTCCAC...GCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp GTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGAAACTGCTGGCCCTGTaGCTCCTTGTCTGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: VPVGSGRPRRPVCPPRHEKLLAL*LLVCGA
Trigger: CGCTCCACAGACAAGGAGGCACAGGGCCAGCAGTTT...CTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CACGCTCGGCATCACAGCCCTGTACACCATCGCAGGTATGGTGCCTGCAGCAGGGGGCCAGTCTTGGGCTaGCGGGATCCGGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HARHHSPVHHRRYGACSRGPVLG*RDPEAG
Trigger: GCCTGCTTCCGGATCCCGGCAGCCCAAGACTGGCCC...CCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGTGATGCCGAGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp GCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATGCCGAAGGGACTCGGATaGTCCTCGGTGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: AMHMFRDPHTGDLPWTGMPKGLG*SSVALP
Trigger: TGGCAGGGCCACCGAGGAGCATCCGAGTCCCTTCGG...CATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp GACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGCACCGACCAGGTGAGTaGCAACGTCTCCCGCCCATC +
Preference number: 4 (lower is better)
Translates to: DAMHMFRDPHTGDLPWTGHRPGE*QRLPPI
Trigger: GATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTG...CCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp GCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATCACGTACAGACGCCATaGACATGTTTCGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: AVPVGSGRPRRPVCPPRHHVQTP*TCFETP
Trigger: GGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTG...ATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCAGAGGCTACCCACCCTaGTGCCCCGCTGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: LVHRPGECQRLPPIPPSCRGYPP*CPAVTS
Trigger: GCTGGTAACAGCGGGGCAGCAGGGTGGGTAGCCTCT...GCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp TGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCCAGGCTTGGACTCGCTaGAGCGCCAGTTCACATGGT +
Preference number: 4 (lower is better)
Translates to: WALVGPGGLSALRVMSLGQAWTR*SASSHG
Trigger: ACCATGTGAACTGGCGCTCCAGCGAGTCCAAGCCTG...GCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACGCCGCGGTAGGCGATaGTGTCGGGCCAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HHLPPATYRRHAHVSRPPRRGRR*CRASPG
Trigger: ACCTGGGCTGGCCCGACACCATCGCCTACCGCGGCG...TGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATCTCGGGGAGTTCCCCTaGATGCTCAGCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RHAHVSRPPHRGPAVDRDLGEFP*MLSQRW
Trigger: CCAGCGCTGGCTGAGCATCCAGGGGAACTCCCCGAG...ATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGAGCCAGGCTCCGGGTCTaGCTCCACCCACGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPATYRRHAHVSRPPHRGARLRV*LHPRGQ
Trigger: CTGCCCACGTGGGTGGAGCCAGACCCGGAGCCTGGC...TCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CACACAAGGCTCTCTCCCTCCGCAGCTGGACCTGTACGCGGGGGCTCTGTTTGTGGGAGGGCAAGGCTCTaGACGGGGCCTGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HTRLSPSAAGPVRGGSVCGRARL*TGPAVL
Trigger: CAGGACAGCAGGCCCCGTCCAGAGCCTTGCCCTCCC...ACAAACAGAGCCCCCGCGTACAGGTCCAGCTGCGGAGGGAGAGAGCCTTGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp AGCCCCGGCTTGAGCCCGCCAGATGGTCTATATGGTCTTGGTGGAGGCCCCATCGGCTCAGGGTCCCCCTaGGGGAGGCCGTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SPGLSPPDGLYGLGGGPIGSGSP*GRPFSA
Trigger: AGCTGAGAACGGCCTCCCCCAGGGGGACCCTGAGCC...GATGGGGCCTCCACCAAGACCATATAGACCATCTGGCGGGCTCAAGCCGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTATCCTGGGTAGCCTATaGTCTGTCCCATTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PAVPVGSGRPRRPVCPPRILGSL*SVPFWG
Trigger: TCCCCAGAATGGGACAGACCATAGGCTACCCAGGAT...ACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATACAGATAGCTGCCGCTaGAGTGGGGCGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RHAHVSRPPHRGPAVDRDTDSCR*SGAWPG
Trigger: CCCAGGCCACGCCCCACTCCAGCGGCAGCTATCTGT...ATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCTGCCATCGGTCATaGGGCGGGCATTTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VHRPGECQRLPPIPPSCRPCHRS*GGHFGP
Trigger: TGGCCCAAAATGCCCGCCCCATGACCGATGGCAGGG...ACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATCTGTGCCTCAGGGGGTaGGGCCACATCACCACCAGC +
Preference number: 4 (lower is better)
Translates to: RHAHVSRPPHRGPAVDRDLCLRG*GHITTS
Trigger: GCTGGTGGTGATGTGGCCCCACCCCCTGAGGCACAG...ATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp TCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCTGCAGACGCTCATCATaGTGGTGGGGGCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: SHLPAVPVGSGRPRRPVCCRRSS*WWGLSS
Trigger: GGATGACAGCCCCCACCACCATGATGAGCGTCTGCA...GCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp CATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGGATGTTCTCCCGCTTaGGCACCTCGTAGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: HPTFLPSQWALVGPGGLSGCSPA*APRRRR
Trigger: ACGCCTTCTACGAGGTGCTCAAGCGGGAGAACATCC...AGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp GGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCCCTTCTGTGCCTGGCTaGTCATCTTCCGCACCACCT +
Preference number: 4 (lower is better)
Translates to: GECQRLPPIPPSCRPSGLPSVPG*SSSAPP
Trigger: AGGTGGTGCGGAAGATGATCAGCCAGGCACAGAAGG...GAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp AGTGTCCCTGGGACCCACCGCATGAGAGGGATCCCAGCAGCCAGGCCCAGTCTGCCTCCGGAGAGGGACTaGGTGCTCTCTCACCTCGAA +
Preference number: 4 (lower is better)
Translates to: SVPGTHRMRGIPAARPSLPPERD*VLSHLE
Trigger: TTCGAGGTGAGAGAGCACTCAGTCCCTCTCCGGAGG...CAGACTGGGCCTGGCTGCTGGGATCCCTCTCATGCGGTGGGTCCCAGGGACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp CCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACTGCCCTCCGCGTCATaGGTCTGGGCTGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PPATYRRHAHVSRPPHRGLPSAS*VWAGAS
Trigger: TGAGGCCCCAGCCCAGACTCATGACGCGGAGGGCAG...TCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp ATGCCGTTGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTGGGTTCAGGAGGTTGGGTGCACCGACCAGGTaGGTGCCAACGTCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: MPLGFWVASLGVGGFRRLGAPTR*VPTSPA
Trigger: GGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACC...CAACCTCCTGAACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp GACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGCTTGCCCAAGGCCGATaGGTGTCCAGAGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: DAMHMFRDPHTGDLPWTGLAQGR*VSRGQQ
Trigger: CTGTTGGCCTCTGGACACTCATCGGCCTTGGGCAAG...CCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp CTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCACCCTTGAACTTGGTTaGCGACCGCGTGAAGAACTC +
Preference number: 4 (lower is better)
Translates to: LVGPGGLSALRVMSLGWGTLELG*RPREEL
Trigger: GAGTTCTTCACGCGGTCGGCAACCAAGTTCAAGGGT...GCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp TCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGTACAGCTCCTGGAACTaGCGGTCAAACATCTCCACC +
Preference number: 4 (lower is better)
Translates to: SRPSHLPAVPVGSGRPRRYSSWN*RSNIST
Trigger: GGTGGAGATGTTTGACCGGCAGTTCCAGGAGCTGTA...CCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCGGGAGTTCCCCTGGATaGTCAGCCAGCGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCGSSPG*SASAGP
Trigger: AGGCCCAGCGCTGGCTGAGCATCCAGGGGAACTCCC...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGAGGCCACGGCCGGAGCTaGCTGAGTGGCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PPATYRRHAHVSRPPHRGGHGRS*LSGCPG
Trigger: ACCAGGACAGCCACTCAGGCAGCTCCGGCCGTGGCC...TCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CCCTGGGACCCACCGCATGAGAGGGATCCCAGCAGCCAGGCCCAGTCTGGAAGGGTGGAGCGCTGGGCCTaGATCCTCTTCAACGCATCT +
Preference number: 4 (lower is better)
Translates to: PWDPPHERDPSSQAQSGRVERWA*ILFNAS
Trigger: AGATGCGTTGAAGAGGATGCAGGCCCAGCGCTCCAC...CCTTCCAGACTGGGCCTGGCTGCTGGGATCCCTCTCATGCGGTGGGTCCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp GGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCAAACTGCTGGCCCTGTaGCTCCTTGTCTGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: GECQRLPPIPPSCRPSGLKLLAL*LLVCGA
Trigger: CGCTCCACAGACAAGGAGGCACAGGGCCAGCAGTTT...GAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp GGCCAGGTCTTCCCCCAACCTCACAATGGCCCCGTGATGCAGGCAGGCAGGCGACCATCGCAGGTATGGTaGCTGCAGCAGGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GQVFPQPHNGPVMQAGRRPSQVW*LQQGGP
Trigger: TGGACCTCCCTGCTGCAGGCACCATACCTGCGATGG...TCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAGGTTGGGGGAAGACCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp ACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACACGCCGCGGTAGGCGATaGTGTCGGGCCAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TCHLPRTDAMHMFRDPHTRRGRR*CRASPG
Trigger: ACCTGGGCTGGCCCGACACCATCGCCTACCGCGGCG...TGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCAACATCTCCACCACCTaGCCAGACAGCACAGAGATC +
Preference number: 4 (lower is better)
Translates to: LVGPGGLSALRVMSLGWGNISTT*PDSTEI
Trigger: GATCTCTGTGCTGTCTGGCCAGGTGGTGGAGATGTT...GCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCTCTCAGAGGAGATCTTaGCAATCTCGTCGACGCTCT +
Preference number: 4 (lower is better)
Translates to: LPSQWALVGPGGLSALRVSQRRS*QSRRRS
Trigger: AGAGCGTCGACGAGATTGCCAAGATCTCCTCTGAGA...GACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGTTGATGCGGTTCATCTaGCTGGGCTGGGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QWALVGPGGLSALRVMSLLMRFI*LGWGFQ
Trigger: CTGGAACCCCCAGCCCAGCCAGATGAACCGCATCAA...CAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCGGGAGGGCAAGGCTCTaGACGGGGCCTGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TCHVQTPCTCFETPTQGTGRARL*TGPAVL
Trigger: CAGGACAGCAGGCCCCGTCCAGAGCCTTGCCCTCCC...GGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACGGCTCAGGGTCCCCCTaGGGGAGGCCGTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HLPPATYRRHAHVSRPPHGSGSP*GRPFSA
Trigger: AGCTGAGAACGGCCTCCCCCAGGGGGACCCTGAGCC...GTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGCTGGGCCTGCCATCCTaGGTAGCCTATGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: DAMHMFRDPHTGDLPWTGLGLPS*VAYGLS
Trigger: GGACAGACCATAGGCTACCCAGGATGGCAGGCCCAG...CCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CAGCAGGGAGGTCCACCCAGGGGACGTGTAAAGGGGTCAGAAGGCCACCTCCCCCTCTCGGGGTCATCCTaGGTCACAGATAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QQGGPPRGRVKGSEGHLPLSGSS*VTDSCR
Trigger: GCGGCAGCTATCTGTGACCCAGGATGACCCCGAGAG...GGGGAGGTGGCCTTCTGACCCCTTTACACGTCCCCTGGGTGGACCTCCCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp TGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTTGTCTGTGGAGCGCTaGGCCTGCATCCTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: WALVGPGGLSALRVMSLGLSVER*ACILFN
Trigger: GTTGAAGAGGATGCAGGCCCAGCGCTCCACAGACAA...GCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCTTTCTGGTAGAGCTCTaGACGCTGTCAGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LVGPGGLSALRVMSLGWGFLVEL*TLSAAE
Trigger: CTCTGCTGCTGACAGCGTCCAGAGCTCTACCAGAAA...GCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACGGTGGGGGCCAGCCATaGCTGGGCCAGCGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TTCHLPRTDAMHMFRDPHGGGQP*LGQRFW
Trigger: CCAGAAACGCTGGCCCAGCCATGGCTGGCCCCCACC...GTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GAGCCTGACCTGAGCTCCATGGGAACAGTGATGCTGGGGAGACCAGCATCCAGGGGTGGGGGCCAGCCATaGCTGGGCCAGCGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: EPDLSSMGTVMLGRPASRGGGQP*LGQRFW
Trigger: CCAGAAACGCTGGCCCAGCCATGGCTGGCCCCCACC...CCTGGATGCTGGTCTCCCCAGCATCACTGTTCCCATGGAGCTCAGGTCAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCGTACCTGACCTCCCTTaGCCTGCCAGTGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCVPDLP*PASGGG
Trigger: GCCCCCACCACTGGCAGGCCAAGGGAGGTCAGGTAC...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATTCGGATGCTCCTCGGTaGCCCTGCCATCGGTCATGG +
Preference number: 4 (lower is better)
Translates to: RHAHVSRPPHRGPAVDRDSDAPR*PCHRSW
Trigger: CCATGACCGATGGCAGGGCCACCGAGGAGCATCCGA...ATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTAGACAGTTTGGAGTATaGGATTCCGAAGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: PAVPVGSGRPRRPVCPPRRQFGV*DSEGTR
Trigger: CCGAGTCCCTTCGGAATCCCATACTCCAAACTGTCT...ACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACTCCGATGAGGCCCACTaGCTACCGCCCGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TTCHLPRTDAMHMFRDPHSDEAH*LPPVLA
Trigger: GGCCAGGACGGGCGGTAGCCAGTGGGCCTCATCGGA...GTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGAGGGCCTCAGAAGGTGTaGCTCCAGGCTGGGACATGC +
Preference number: 4 (lower is better)
Translates to: TPCTCFETPTQGTCRGPGGPQKV*LQAGTC
Trigger: GCATGTCCCAGCCTGGAGCCACACCTTCTGAGGCCC...TCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACAGCCCTGTACACCATCGCAGGTATGGTGCCTGCAGCAGGGAGGTCCACCCAGGTGGTTACGGGCAGCTaGAGGCAGCCTACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TALYTIAGMVPAAGRSTQVVTGS*RQPTPR
Trigger: CCTGGGCGTAGGCTGCCTCCAGCTGCCCGTAACCAC...CTGGGTGGACCTCCCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGATCGCTGGGAGTGGGTaGGTTCAGGAGGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QWALVGPGGLSALRVMSLIAGSG*VQEVEP
Trigger: TGGCTCAACCTCCTGAACCCACCCACTCCCAGCGAT...CAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp ACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGAGAGCCCTTTGGAGTCTaGCACTGCCCGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: TPCTCFETPTQGTCRGPGEPFGV*HCPALC
Trigger: GCACAGTGCCGGGCAGTGCCAGACTCCAAAGGGCTC...TCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGACACCATCGCAGGTATaGTGCCTGCAGCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ANVSRPSHLPAVPVGSGRTPSQV*CLQQGG
Trigger: ACCTCCCTGCTGCAGGCACCATACCTGCGATGGTGT...CCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CAA 72 bp TCTGGCACTGCCCGGCACTGTGCAGGATTCATGCCGTaGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SGTARHCAGFMP*GFWVASLGVGG
Trigger: CCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCATGAATCCTGCACAGTGCCGGGCAGTGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp GGCCAGGTCTTCCCCCAACCTCACAATGGCCCCGTGATGCAGGCAGGCAGGCGAGGATGTTCTCCCGCTTaGGCACCTCGTAGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: GQVFPQPHNGPVMQAGRRGCSPA*APRRRR
Trigger: ACGCCTTCTACGAGGTGCTCAAGCGGGAGAACATCC...TCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAGGTTGGGGGAAGACCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCTGGTTGCCGACCGCGTaGAGAACTCAGTTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCWLPTA*RTQFPR
Trigger: GCGGGGGAACTGAGTTCTTCACGCGGTCGGCAACCA...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGAGGTGTCACGGATCTTaGTGCGGTTCATCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QWALVGPGGLSALRVMSLRCHGS*CGSSGW
Trigger: CCAGCCAGATGAACCGCATCAAGATCCGTGACACCT...CAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGATCCAGAGGCCAACAGTaGCTCCTGCTGGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PPATYRRHAHVSRPPHRGSRGQQ*LLLGQR
Trigger: CCGCTGGCCCAGCAGGAGTCACTGTTGGCCTCTGGA...TCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp CCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACTGGGACCCACCGCATaGGAGGGATCCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PPATCHVQTPCTCFETPTLGPTA*EGSQQP
Trigger: TGGCTGCTGGGATCCCTCTCATGCGGTGGGTCCCAG...TGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp GGCCAGGTCTTCCCCCAACCTCACAATGGCCCCGTGATGCAGGCAGGCAGGCGAGCTCCATGGGAACAGTaGTGCTGGGGAGACCAGCAT +
Preference number: 4 (lower is better)
Translates to: GQVFPQPHNGPVMQAGRRAPWEQ*CWGDQH
Trigger: ATGCTGGTCTCCCCAGCATCACTGTTCCCATGGAGC...TCGCCTGCCTGCCTGCATCACGGGGCCATTGTGAGGTTGGGGGAAGACCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp TGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGGCTGTCATCCTaGCAATCAAAGGTGAGGACA +
Preference number: 4 (lower is better)
Translates to: WALVGPGGLSALRVMSLGWGLSS*QSKVRT
Trigger: TGTCCTCACCTTTGATTGTCAGGATGACAGCCCCCA...GCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp GACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGCTGAGATTCTTGAGGTaGCCCAGGTGCATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: DAMHMFRDPHTGDLPWTGLRFLR*PRCMQA
Trigger: GGCCTGCATGCACCTGGGGCACCTCAAGAATCTCAG...CCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp AGCCCCGGCTTGAGCCCGCCAGATGGTCTATATGGTCTTGGTGGAGGCCCCATCCACCGACCAGGTGAGTaGCAACGTCTCCCGCCCATC +
Preference number: 4 (lower is better)
Translates to: SPGLSPPDGLYGLGGGPIHRPGE*QRLPPI
Trigger: GATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTG...GATGGGGCCTCCACCAAGACCATATAGACCATCTGGCGGGCTCAAGCCGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp GCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGATTGCCAACACCACCTaGCACCTGCCACGTACAGAC +
Preference number: 4 (lower is better)
Translates to: ANVSRPSHLPAVPVGSGRIANTT*HLPRTD
Trigger: GTCTGTACGTGGCAGGTGGCAGGTGGTGTTGGCAAT...CCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACACACTGCTGCCGGGGGTaGGTGGGCAAGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TCHLPRTDAMHMFRDPHTHCCRG*VGKVQL
Trigger: GAGCTGGACCTTGCCCACCCACCCCCGGCAGCAGTG...TGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCGAGCGCCAGTTCACATaGTTGTCGTCCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: GECQRLPPIPPSCRPSGLERQFT*LSSRHC
Trigger: GCAGTGTCTGGACGACAACCATGTGAACTGGCGCTC...GAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTAGAAGAACTCAGGCTTaGACTCGCTGGAGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: HPTFLPSQWALVGPGGLSRRTQA*TRWSAS
Trigger: ACTGGCGCTCCAGCGAGTCCAAGCCTGAGTTCTTCT...AGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGACAGGTGAAGCAGTCCTaGGTGGATGGGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TPCTCFETPTQGTCRGPGQVKQS*VDGWQQ
Trigger: CTGCTGCCACCCATCCACCCAGGACTGCTTCACCTG...TCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCGGTACTCAAACATGTTaGCCCTCTCCAGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PTFLPSQWALVGPGGLSAGTQTC*PSPGEA
Trigger: TGCTTCACCTGGAGAGGGCCAACATGTTTGAGTACC...GGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGTGGTCTGTCCCATTCTaGGGAGCTTCCTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QWALVGPGGLSALRVMSLWSVPF*GASSLG
Trigger: CCCCAAAGAGGAAGCTCCCCAGAATGGGACAGACCA...CAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACAACAGATAGCTGCCGCTaGAGTGGGGCGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPATCHVQTPCTCFETPTTDSCR*SGAWPG
Trigger: CCCAGGCCACGCCCCACTCCAGCGGCAGCTATCTGT...TGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCCCGGAGCTGCCTGAGTaGCTGTCCTGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCPELPE*LSWSLR
Trigger: CCTCAGTGACCAGGACAGCCACTCAGGCAGCTCCGG...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACAGCCCTGTACACCATCGCAGGTATGGTGCCTGCAGCAGGGAGGTCCACCCAGCCGGAGCTGCCTGAGTaGCTGTCCTGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: TALYTIAGMVPAAGRSTQPELPE*LSWSLR
Trigger: CCTCAGTGACCAGGACAGCCACTCAGGCAGCTCCGG...CTGGGTGGACCTCCCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CACGCTCGGCATCACAGCCCTGTACACCATCGCAGGTATGGTGCCTGCAGCAGGGCCACTTGCTCTGAGTaGCGCCTCCGGAGAGGGACT +
Preference number: 4 (lower is better)
Translates to: HARHHSPVHHRRYGACSRATCSE*RLRRGT
Trigger: AGTCCCTCTCCGGAGGCGCCACTCAGAGCAAGTGGC...CCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGTGATGCCGAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTTTCTGGTAGAGCTCTaGACGCTGTCAGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VPVGSGRPRRPVCPPRHEFLVEL*TLSAAE
Trigger: CTCTGCTGCTGACAGCGTCCAGAGCTCTACCAGAAA...CTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp AGCAGGCTGCCTCTTCCATGTCCCACTTGGAAAAGGCTAGGGAGTAGGGCCTGGTTGGCCTGCCAGTGGTaGGGGCCAGCCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRLPLPCPTWKRLGSRAWLACQW*GPAMAG
Trigger: CCCAGCCATGGCTGGCCCCCACCACTGGCAGGCCAA...CCAGGCCCTACTCCCTAGCCTTTTCCAAGTGGGACATGGAAGAGGCAGCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CTGGACCTGTACGCGGGGGCTCTGTTTGTGCACATCTGCCTGGGCTGGAACTTCGTACCTGACCTCCCTTaGCCTGCCAGTGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LDLYAGALFVHICLGWNFVPDLP*PASGGG
Trigger: GCCCCCACCACTGGCAGGCCAAGGGAGGTCAGGTAC...GAAGTTCCAGCCCAGGCAGATGTGCACAAACAGAGCCCCCGCGTACAGGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp ACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGAGGCTACCGCCCGTCCTaGCCTTTAGGTGCTTCGACT +
Preference number: 4 (lower is better)
Translates to: TPCTCFETPTQGTCRGPGGYRPS*PLGAST
Trigger: AGTCGAAGCACCTAAAGGCCAGGACGGGCGGTAGCC...TCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGATTCCTGCCGTCCCAGTaGGCTCTGGTAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PPATYRRHAHVSRPPHRGFLPSQ*ALVGPG
Trigger: GCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAA...TCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp TCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCGACAATCGGAAACCTaGCTGAGAACCACTTGCCCA +
Preference number: 4 (lower is better)
Translates to: SHLPAVPVGSGRPRRPVCRQSET*LRTTCP
Trigger: TGGGCAAGTGGTTCTCAGCCAGGTTTCCGATTGTCG...GCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTGGTCTATATGGTCTTaGTGGAGGCCCCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: VPVGSGRPRRPVCPPRHEWSIWS*WRPHPS
Trigger: AGAGGGATGGGGCCTCCACCAAGACCATATAGACCA...CTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CAGCAGGGAGGTCCACCCAGGGGACGTGTAAAGGGGTCAGAAGGCCACCTCCCCTCCAGACTCAGACACTaGGACCCTGTGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QQGGPPRGRVKGSEGHLPSRLRH*DPVAEQ
Trigger: CTGCTCAGCCACAGGGTCCCAGTGTCTGAGTCTGGA...GGGGAGGTGGCCTTCTGACCCCTTTACACGTCCCCTGGGTGGACCTCCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGGCCATAAAACTGCCTaGGCAGCTCCTCCAATTGTT +
Preference number: 4 (lower is better)
Translates to: AVPVGSGRPRRPVCPPRHGHKTA*AAPPIV
Trigger: AACAATTGGAGGAGCTGCCCAGGCAGTTTTATGGCC...ATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCAGGGAGTGGCTTGCTaGAGCCCTGGGAATAACAGT +
Preference number: 4 (lower is better)
Translates to: ANVSRPSHLPAVPVGSGRQGVAC*SPGNNS
Trigger: ACTGTTATTCCCAGGGCTCCAGCAAGCCACTCCCTG...CCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp CACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCATCCAGACACTGCACCTaGGAGAAGGCCATGGCGCCG +
Preference number: 4 (lower is better)
Translates to: HHLPPATYRRHAHVSRPPSRHCT*EKAMAP
Trigger: CGGCGCCATGGCCTTCTCTCAGGTGCAGTGTCTGGA...TGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCTCCGCACCACCTCTTTaGTGTGGGCCTGCCCGTCTA +
Preference number: 4 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCSAPPL*CGPARL
Trigger: TAGACGGGCAGGCCCACATCAAAGAGGTGGTGCGGA...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp GCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATGCCTTCTGTGCCTGGCTaGTCATCTTCCGCACCACCT +
Preference number: 4 (lower is better)
Translates to: AMHMFRDPHTGDLPWTGMPSVPG*SSSAPP
Trigger: AGGTGGTGCGGAAGATGATCAGCCAGGCACAGAAGG...CATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp ACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCTACTCTCATCCACGATaGTGTACACGGCCACTTTCC +
Preference number: 4 (lower is better)
Translates to: TFLPSQWALVGPGGLSALYSHPR*CTRPLS
Trigger: GGAAAGTGGCCGTGTACATCATCGTGGATGAGAGTA...GAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCTGTGCAGGAAGTACTTaGCGTTACTCTCATCCACGA +
Preference number: 4 (lower is better)
Translates to: PTFLPSQWALVGPGGLSACAGST*RYSHPR
Trigger: TCGTGGATGAGAGTAACGTCAAGTACTTCCTGCACA...GGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp GCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATTGTGCAGGAAGTACTTaGCGTTACTCTCATCCACGA +
Preference number: 4 (lower is better)
Translates to: AVPVGSGRPRRPVCPPRHCAGST*RYSHPR
Trigger: TCGTGGATGAGAGTAACGTCAAGTACTTCCTGCACA...ATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp GTACTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCCGACGCTCTTGGCCTTaGCAAGTGCGTACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VLVHRPGECQRLPPIPPSRRSWP*QVRTWG
Trigger: ACCCCAAGTACGCACTTGTCAAGGCCAAGAGCGTCG...GGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp AGCCCCGGCTTGAGCCCGCCAGATGGTCTATATGGTCTTGGTGGAGGCCCCATCTTGGCCCTCTCCAGGTaGAGCAGTCCTGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SPGLSPPDGLYGLGGGPILALSR*SSPGWM
Trigger: CATCCACCCAGGACTGCTTCACCTGGAGAGGGCCAA...GATGGGGCCTCCACCAAGACCATATAGACCATCTGGCGGGCTCAAGCCGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp AGGTCACCCAGGGAGTGGCTTGCTGGAGCCCTGGGAATAACAGTCCCACACAAGGTTGGCCACTTGCTCTaGGTGGCGCCTCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RSPREWLAGALGITVPHKVGHLL*VAPPER
Trigger: CCTCTCCGGAGGCGCCACTCAGAGCAAGTGGCCAAC...CTTGTGTGGGACTGTTATTCCCAGGGCTCCAGCAAGCCACTCCCTGGGTGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp GGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCCTTTTAGGTGCTTCGACTaGGACAGTTTGGAGTATGGG +
Preference number: 4 (lower is better)
Translates to: GRPRRPVCPPRHESGLGPFRCFD*DSLEYG
Trigger: CCCATACTCCAAACTGTCTCAGTCGAAGCACCTAAA...AGGCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp AGTGTCCCTGGGACCCACCGCATGAGAGGGATCCCAGCAGCCAGGCCCAGTCTGAATCGGAAACCTGGCTaGGAACCACTTGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SVPGTHRMRGIPAARPSLNRKPG*EPLAQG
Trigger: GCCTTGGGCAAGTGGTTCTCAGCCAGGTTTCCGATT...CAGACTGGGCCTGGCTGCTGGGATCCCTCTCATGCGGTGGGTCCCAGGGACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp GTACTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCGAAAAAGCCCCGGCTTaGGCCCGCCAGATGGTCTAT +
Preference number: 4 (lower is better)
Translates to: VLVHRPGECQRLPPIPPSEKAPA*ARQMVY
Trigger: ATAGACCATCTGGCGGGCTCAAGCCGGGGCTTTTTC...GGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp ACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCGGCTGTAGGCGGGTGTaGAGGCACACAACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TCHVQTPCTCFETPTQGTGCRRV*RHTTRR
Trigger: CCTCCTGGTTGTGTGCCTTCACACCCGCCTACAGCC...GGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp TGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCAGCTATCACCTTCTGTaGCTGGCTGATCATCTTCCG +
Preference number: 4 (lower is better)
Translates to: WALVGPGGLSALRVMSLGSYHLL*LADHLP
Trigger: CGGAAGATGATCAGCCAGGCACAGAAGGTGATAGCT...GCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp GTACTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCCTGAGATTCTTGAGGTaGCCCAGGTGCATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: VLVHRPGECQRLPPIPPSLRFLR*PRCMQA
Trigger: GGCCTGCATGCACCTGGGGCACCTCAAGAATCTCAG...GGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp GTGACACAGACACAGATGGGCCAGGGCTTGGCCATGCCGGGCCCTGACCCCGAGTACAGCTCCTGGAACTaGCGGTCAAACATCTCCACC +
Preference number: 4 (lower is better)
Translates to: VTQTQMGQGLAMPGPDPEYSSWN*RSNIST
Trigger: GGTGGAGATGTTTGACCGGCAGTTCCAGGAGCTGTA...CTCGGGGTCAGGGCCCGGCATGGCCAAGCCCTGGCCCATCTGTGTCTGTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp GCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGGGCTTCTTGGCCTCCTaGTTCTCAGAGGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: ANVSRPSHLPAVPVGSGRGFLAS*FSEEIL
Trigger: CAAGATCTCCTCTGAGAAGCAGGAGGCCAAGAAGCC...CCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTCCCAGCCAATATCACTaGTGTCCCGGGCTAGTACAT +
Preference number: 4 (lower is better)
Translates to: HPTFLPSQWALVGPGGLSPSQYH*CPGLVH
Trigger: ATGTACTAGCCCGGGACAGCAGTGATATTGGCTGGG...AGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCATGGGTCACAGATAGCTaGCGCTGGAGTGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: HHLPPATYRRHAHVSRPPWVTDS*RWSGAW
Trigger: CCACGCCCCACTCCAGCGGCAGCTATCTGTGACCCA...TGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCAGCCACCTGGTACTGGTaGACCGACCAGGTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: HHLPPATYRRHAHVSRPPATWYW*TDQVSA
Trigger: GGCACTCACCTGGTCGGTGCACCAGTACCAGGTGGC...TGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATTCCCTCCAGGACCATTaGCAACACCACCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: RHAHVSRPPHRGPAVDRDSLQDH*QHHLPP
Trigger: AGGTGGCAGGTGGTGTTGGCAATGGTCCTGGAGGGA...ATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGAGGCTACCCACCCTGCTaGCCCGCTGTTACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PPATYRRHAHVSRPPHRGGYPPC*PAVTSS
Trigger: AGAGCTGGTAACAGCGGGGCAGCAGGGTGGGTAGCC...TCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp CACACAAGGCTCTCTCCCTCCGCAGCTGGACCTGTACGCGGGGGCTCTGTTTGTCACTGCCCGGCACTGTaGAGGATTCATGCCGTTGGG +
Preference number: 4 (lower is better)
Translates to: HTRLSPSAAGPVRGGSVCHCPAL*RIHAVG
Trigger: CCCAACGGCATGAATCCTGCACAGTGCCGGGCAGTG...ACAAACAGAGCCCCCGCGTACAGGTCCAGCTGCGGAGGGAGAGAGCCTTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATGCAGGCTTGGACTCGCTaGAGCGCCAGTTCACATGGT +
Preference number: 4 (lower is better)
Translates to: AMHMFRDPHTGDLPWTGMQAWTR*SASSHG
Trigger: ACCATGTGAACTGGCGCTCCAGCGAGTCCAAGCCTG...CATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTAGAAGAACTCAGGCTTaGACTCGCTGGAGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: VHRPGECQRLPPIPPSCRRRTQA*TRWSAS
Trigger: ACTGGCGCTCCAGCGAGTCCAAGCCTGAGTTCTTCT...ACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp TGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCATGAGGTACAGCTCCTaGAACTGCCGGTCAAACATC +
Preference number: 4 (lower is better)
Translates to: WALVGPGGLSALRVMSLGMRYSS*NCRSNI
Trigger: GATGTTTGACCGGCAGTTCCAGGAGCTGTACCTCAT...GCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATGTGCGGTTCATCTGGCTaGGCTGGGGGTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: AMHMFRDPHTGDLPWTGMCGSSG*AGGSRC
Trigger: ACATCTGGAACCCCCAGCCCAGCCAGATGAACCGCA...CATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCGTGGGGTTGGCCCGTTaGCCACTTGCTCTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: TPPATCHVQTPCTCFETPVGLAR*PLALSG
Trigger: GCCACTCAGAGCAAGTGGCCAACGGGCCAACCCCAC...GGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp AGCCCCGGCTTGAGCCCGCCAGATGGTCTATATGGTCTTGGTGGAGGCCCCATCCATGGGGAGCCACCCTaGGGTCCAACAAAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SPGLSPPDGLYGLGGGPIHGEPP*GPTKVP
Trigger: AGGGACCTTTGTTGGACCCCAGGGTGGCTCCCCATG...GATGGGGCCTCCACCAAGACCATATAGACCATCTGGCGGGCTCAAGCCGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp ACACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCATGGGGCGGGCATTTTaGGCCAGTCTTGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TPPATCHVQTPCTCFETPMGRAF*ASLGLP
Trigger: CGGCAGCCCAAGACTGGCCCAAAATGCCCGCCCCAT...GGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCAATGGGGCGGGCATTTTaGGCCAGTCTTGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: HHLPPATYRRHAHVSRPPMGRAF*ASLGLP
Trigger: CGGCAGCCCAAGACTGGCCCAAAATGCCCGCCCCAT...TGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCTCGGATGCTCCTCGGTaGCCCTGCCATCGGTCATGG +
Preference number: 4 (lower is better)
Translates to: TPPATCHVQTPCTCFETPSDAPR*PCHRSW
Trigger: CCATGACCGATGGCAGGGCCACCGAGGAGCATCCGA...GGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GAGCCTGACCTGAGCTCCATGGGAACAGTGATGCTGGGGAGACCAGCATCCAGGGGGCCTCAGAAGGTGTaGCTCCAGGCTGGGACATGC +
Preference number: 4 (lower is better)
Translates to: EPDLSSMGTVMLGRPASRGPQKV*LQAGTC
Trigger: GCATGTCCCAGCCTGGAGCCACACCTTCTGAGGCCC...CCTGGATGCTGGTCTCCCCAGCATCACTGTTCCCATGGAGCTCAGGTCAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATACCATCATGGCCACCTaGTACTGGTGCACCGACCAG +
Preference number: 4 (lower is better)
Translates to: RHAHVSRPPHRGPAVDRDTIMAT*YWCTDQ
Trigger: CTGGTCGGTGCACCAGTACCAGGTGGCCATGATGGT...ATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp TCCCTCCGCAGCTGGACCTGTACGCGGGGGCTCTGTTTGTGCACATCTGCCTGGTACCAGCTCTGGCCCTaGCAAGGAGCTGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: SLRSWTCTRGLCLCTSAWYQLWP*QGADSG
Trigger: TCCTGAGTCAGCTCCTTGCCAGGGCCAGAGCTGGTA...CCAGGCAGATGTGCACAAACAGAGCCCCCGCGTACAGGTCCAGCTGCGGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp AGGTCACCCAGGGAGTGGCTTGCTGGAGCCCTGGGAATAACAGTCCCACACAAGCCACAGCGAGCCCTTTaGAGTCTGGCACTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RSPREWLAGALGITVPHKPQRAL*SLALPG
Trigger: GCCGGGCAGTGCCAGACTCCAAAGGGCTCGCTGTGG...CTTGTGTGGGACTGTTATTCCCAGGGCTCCAGCAAGCCACTCCCTGGGTGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp ACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACCAACCTTGCTTCCACTaGCAGGGGGCCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TTCHLPRTDAMHMFRDPHQPCFH*QGAWLL
Trigger: CAGCAGCCAGGCCCCCTGCCAGTGGAAGCAAGGTTG...GTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp CCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACATCTCCAGGATGCGCTTaGGCTCCAGCTCCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PPATCHVQTPCTCFETPTSPGCA*APAPRG
Trigger: TCCTCTCGGAGCTGGAGCTCAAGCGCATCCTGGAGA...TGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTTACTCTCATCCACGATaGTGTACACGGCCACTTTCC +
Preference number: 4 (lower is better)
Translates to: HPTFLPSQWALVGPGGLSYSHPR*CTRPLS
Trigger: GGAAAGTGGCCGTGTACATCATCGTGGATGAGAGTA...AGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp GTACTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCCTCCATCCACAAACATaGACTTCTGGGCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VLVHRPGECQRLPPIPPSLHPQT*TSGPGH
Trigger: GTGCCCTGGCCCAGAAGTTCATGTTTGTGGATGGAG...GGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp CATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTTCACACTGTGTGACATaGGGTACAGCTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: HPTFLPSQWALVGPGGLSSHCVT*GTAPGT
Trigger: AGTTCCAGGAGCTGTACCTCATGTCACACAGTGTGA...AGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp TCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCTTTAGGTGCTTCGACTaGGACAGTTTGGAGTATGGG +
Preference number: 4 (lower is better)
Translates to: SHLPAVPVGSGRPRRPVCFRCFD*DSLEYG
Trigger: CCCATACTCCAAACTGTCTCAGTCGAAGCACCTAAA...GCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp ACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCCCGTTTAGAATCCGATaGGGCCCACTGGCTACCGCC +
Preference number: 4 (lower is better)
Translates to: TCHVQTPCTCFETPTQGTPFRIR*GPLATA
Trigger: GGCGGTAGCCAGTGGGCCTCATCGGATTCTAAACGG...GGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp GTACTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCCGGAGAGGGACTGAGTaGTCTCTCACCTCGAAGTAC +
Preference number: 4 (lower is better)
Translates to: VLVHRPGECQRLPPIPPSRRGTE*SLTSKY
Trigger: GTACTTCGAGGTGAGAGAGCACTCAGTCCCTCTCCG...GGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTCCTCTTCAACGCATCTaGTTCTTCTCTTCCCCGACT +
Preference number: 4 (lower is better)
Translates to: HPTFLPSQWALVGPGGLSPLQRI*FFSSPT
Trigger: AGTCGGGGAAGAGAAGAAGCAGATGCGTTGAAGAGG...AGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CAGCAGGGAGGTCCACCCAGGGGACGTGTAAAGGGGTCAGAAGGCCACCTCCCCAGCGGGACACTGGGGTaGCCATGTGCAAAATGCTTA +
Preference number: 4 (lower is better)
Translates to: QQGGPPRGRVKGSEGHLPSGTLG*PCAKCL
Trigger: TAAGCATTTTGCACATGGGCACCCCAGTGTCCCGCT...GGGGAGGTGGCCTTCTGACCCCTTTACACGTCCCCTGGGTGGACCTCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp GCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATTGGCACTTGTTCATTTaGTCTGAGCCTCACACAAAC +
Preference number: 4 (lower is better)
Translates to: AVPVGSGRPRRPVCPPRHWHLFI*SEPHTN
Trigger: GTTTGTGTGAGGCTCAGAGCAAATGAACAAGTGCCA...ATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp CCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACGGGGGCTCTGTTTGTaGACATCTGCCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PPATYRRHAHVSRPPHRGRGLCL*TSAWAG
Trigger: TCCAGCCCAGGCAGATGTGCACAAACAGAGCCCCCG...TCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGGGTACTCAAACATGTTaGCCCTCTCCAGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: ANVSRPSHLPAVPVGSGRGTQTC*PSPGEA
Trigger: TGCTTCACCTGGAGAGGGCCAACATGTTTGAGTACC...CCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp TTGGACTGGAGAGGAAAAAGCCCCGGCTTGAGCCCGCCAGATGGTCTATATGGTGCGCGGTGGTGGGGTTaGCCCGTTGGCCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: LDWRGKSPGLSPPDGLYGARWWG*PVGHLL
Trigger: GAGCAAGTGGCCAACGGGCCAACCCCACCACCGCGC...ACCATATAGACCATCTGGCGGGCTCAAGCCGGGGCTTTTTCCTCTCCAGTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp ACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGTCCCTCGGGTTATATaGGGGGCACTCAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: TCHLPRTDAMHMFRDPHTVPRVI*GALSCR
Trigger: CCGGCAGCTGAGTGCCCCCCATATAACCCGAGGGAC...TGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATGTACCTAGGGGGTCCTaGGAAGCCGTCTTTATCCCT +
Preference number: 4 (lower is better)
Translates to: RHAHVSRPPHRGPAVDRDVPRGS*EAVFIP
Trigger: AGGGATAAAGACGGCTTCCCAGGACCCCCTAGGTAC...ATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGATTTTGGGCCAGTCTTaGGCTGCCGGGATCCGGAAG +
Preference number: 4 (lower is better)
Translates to: PRTDAMHMFRDPHTGDLPILGQS*AAGIRK
Trigger: CTTCCGGATCCCGGCAGCCCAAGACTGGCCCAAAAT...CGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp AAGGCCGATGAGTGTCCAGAGGCCAACAGTGACTCCTGCTGGGCCAGCGGGACAATTTTGGGCCAGTCTTaGGCTGCCGGGATCCGGAAG +
Preference number: 4 (lower is better)
Translates to: KADECPEANSDSCWASGTILGQS*AAGIRK
Trigger: CTTCCGGATCCCGGCAGCCCAAGACTGGCCCAAAAT...TGTCCCGCTGGCCCAGCAGGAGTCACTGTTGGCCTCTGGACACTCATCGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp ACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCTCGACTGAGACAGTTTaGAGTATGGGATTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: TFLPSQWALVGPGGLSALSTETV*SMGFRR
Trigger: CCTTCGGAATCCCATACTCCAAACTGTCTCAGTCGA...GAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp TGCAGGATTCATGCCGTTGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTGGGTTGGTGTGGCTCCAGGCTaGGACATGCTGCTAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CRIHAVGVLGSIAGSGWVGVAPG*DMLLGV
Trigger: GACCCCTAGCAGCATGTCCCAGCCTGGAGCCACACC...AACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCATGAATCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTCTTCCATGTCCCACTTaGAAAAGGCTAGGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: HPTFLPSQWALVGPGGLSLPCPT*KRLGSR
Trigger: CCTACTCCCTAGCCTTTTCCAAGTGGGACATGGAAG...AGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCGGCTGTCCTGGTCACTaGGGGTTACGTAGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCGCPGH*GLRSRH
Trigger: ATGACGACTACGTAACCCTCAGTGACCAGGACAGCC...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp ACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATCTGAATACAGAGCCTaGCCTGAGCTCCATGGGAAC +
Preference number: 4 (lower is better)
Translates to: TPCTCFETPTQGTCRGPGSEYRA*PELHGN
Trigger: GTTCCCATGGAGCTCAGGTCAGGCTCTGTATTCAGA...TCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp GTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCTTGTTCATTTGCTCTaGGCCTCACACAAACCCTCG +
Preference number: 4 (lower is better)
Translates to: VHRPGECQRLPPIPPSCRLVHLL*ASHKPS
Trigger: CGAGGGTTTGTGTGAGGCTCAGAGCAAATGAACAAG...ACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp TGCAGGATTCATGCCGTTGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTGGGTTGTGGGTTCAGGAGGTTaGGCCACTAGGCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: CRIHAVGVLGSIAGSGWVVGSGG*ATRQSA
Trigger: GGCTGACTGCCTAGTGGCTCAACCTCCTGAACCCAC...AACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCATGAATCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp GAGCCTGACCTGAGCTCCATGGGAACAGTGATGCTGGGGAGACCAGCATCCAGGTCCCTCCAGGACCATTaGCAACACCACCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: EPDLSSMGTVMLGRPASRSLQDH*QHHLPP
Trigger: AGGTGGCAGGTGGTGTTGGCAATGGTCCTGGAGGGA...CCTGGATGCTGGTCTCCCCAGCATCACTGTTCCCATGGAGCTCAGGTCAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACAACCACCTCTTTGATGTaGGCCTGCCCGTCTATGGGG +
Preference number: 4 (lower is better)
Translates to: PPATCHVQTPCTCFETPTTTSLM*ACPSMG
Trigger: CCCCATAGACGGGCAGGCCCACATCAAAGAGGTGGT...TGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACCACCTCTTTGATGTaGGCCTGCCCGTCTATGGGG +
Preference number: 4 (lower is better)
Translates to: TTCHLPRTDAMHMFRDPHTTSLM*ACPSMG
Trigger: CCCCATAGACGGGCAGGCCCACATCAAAGAGGTGGT...GTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp ACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGAAACATCTCCACCACCTaGCCAGACAGCACAGAGATC +
Preference number: 4 (lower is better)
Translates to: TPCTCFETPTQGTCRGPGNISTT*PDSTEI
Trigger: GATCTCTGTGCTGTCTGGCCAGGTGGTGGAGATGTT...TCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp CTGGGCTGGAACTTCTACCTCTCCACCATCCTCACGCTCGGCATCACAGCCCTGTTCATCTGGCTGGGCTaGGGGTTCCAGATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LGWNFYLSTILTLGITALFIWLG*GFQMLG
Trigger: CCCCAACATCTGGAACCCCCAGCCCAGCCAGATGAA...CAGGGCTGTGATGCCGAGCGTGAGGATGGTGGAGAGGTAGAAGTTCCAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCATGCGGTTCATCTGGCTaGGCTGGGGGTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: HHLPPATYRRHAHVSRPPCGSSG*AGGSRC
Trigger: ACATCTGGAACCCCCAGCCCAGCCAGATGAACCGCA...TGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCTGGTCTGTCCCATTCTaGGGAGCTTCCTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ATYRRHAHVSRPPHRGPAWSVPF*GASSLG
Trigger: CCCCAAAGAGGAAGCTCCCCAGAATGGGACAGACCA...GGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTCGACTGAGACAGTTTaGAGTATGGGATTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GECQRLPPIPPSCRPSGLSTETV*SMGFRR
Trigger: CCTTCGGAATCCCATACTCCAAACTGTCTCAGTCGA...GAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR TCA 90 bp AGCAGGCTGCCTCTTCCATGTCCCACTTGGAAAAGGCTAGGGAGTAGGGCCTGGCGACGCTCTTGGCCTTaGCAAGTGCGTACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SRLPLPCPTWKRLGSRAWRRSWP*QVRTWG
Trigger: ACCCCAAGTACGCACTTGTCAAGGCCAAGAGCGTCG...CCAGGCCCTACTCCCTAGCCTTTTCCAAGTGGGACATGGAAGAGGCAGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp ACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCGGCTGTCCTGGTCACTaGGGGTTACGTAGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: TCHVQTPCTCFETPTQGTGCPGH*GLRSRH
Trigger: ATGACGACTACGTAACCCTCAGTGACCAGGACAGCC...GGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCCTTGGCCTTGACAAGTaGGTACTTGGGGTTGACGAG +
Preference number: 4 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCLGLDK*VLGVDE
Trigger: CTCGTCAACCCCAAGTACGCACTTGTCAAGGCCAAG...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCGGCTTCTTGGCCTCCTaGTTCTCAGAGGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCGFLAS*FSEEIL
Trigger: CAAGATCTCCTCTGAGAAGCAGGAGGCCAAGAAGCC...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp AAGGCCGATGAGTGTCCAGAGGCCAACAGTGACTCCTGCTGGGCCAGCGGGACACCCAGCCAATATCACTaGTGTCCCGGGCTAGTACAT +
Preference number: 4 (lower is better)
Translates to: KADECPEANSDSCWASGTPSQYH*CPGLVH
Trigger: ATGTACTAGCCCGGGACAGCAGTGATATTGGCTGGG...TGTCCCGCTGGCCCAGCAGGAGTCACTGTTGGCCTCTGGACACTCATCGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp ACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCCGGAGAGGGACTGAGTaGTCTCTCACCTCGAAGTAC +
Preference number: 4 (lower is better)
Translates to: TCHVQTPCTCFETPTQGTRRGTE*SLTSKY
Trigger: GTACTTCGAGGTGAGAGAGCACTCAGTCCCTCTCCG...GGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp TGTACAAAATGCCAAGAGGTGATGCTACCTCCTGCAGGACAAAGGCCAGGGAGGCCCAGGCGGCCTGTCTaGCCTCCGCGTCATGAGTCT +
Preference number: 4 (lower is better)
Translates to: CTKCQEVMLPPAGQRPGRPRRPV*PPRHES
Trigger: AGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGG...CCTCCCTGGCCTTTGTCCTGCAGGAGGTAGCATCACCTCTTGGCATTTTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp CCTGCAGCAGGGAGGTCCACCCAGGGGACGTGTAAAGGGGTCAGAAGGCCACCTCTGTTTGTGCACATCTaGCTGGGCTGGAACTTCTAC +
Preference number: 4 (lower is better)
Translates to: PAAGRSTQGTCKGVRRPPLFVHI*LGWNFY
Trigger: GTAGAAGTTCCAGCCCAGGCAGATGTGCACAAACAG...AGGTGGCCTTCTGACCCCTTTACACGTCCCCTGGGTGGACCTCCCTGCTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp ACACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCCTGGCTCCACCCACGTaGGCAGGTACTCAAACATGT +
Preference number: 4 (lower is better)
Translates to: TPPATCHVQTPCTCFETPLAPPT*AGTQTC
Trigger: ACATGTTTGAGTACCTGCCCACGTGGGTGGAGCCAG...GGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp TGTACAAAATGCCAAGAGGTGATGCTACCTCCTGCAGGACAAAGGCCAGGGAGGTCTCTTCCCCGACTCTaGGCCCATGGGGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: CTKCQEVMLPPAGQRPGRSLPRL*AHGEPP
Trigger: GGGTGGCTCCCCATGGGCCCAGAGTCGGGGAAGAGA...CCTCCCTGGCCTTTGTCCTGCAGGAGGTAGCATCACCTCTTGGCATTTTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp ACACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCGTACCTAGGGGGTCCTaGGAAGCCGTCTTTATCCCT +
Preference number: 4 (lower is better)
Translates to: TPPATCHVQTPCTCFETPVPRGS*EAVFIP
Trigger: AGGGATAAAGACGGCTTCCCAGGACCCCCTAGGTAC...GGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp GGAGCCCTGGGAATAACAGTCCCACACAAGGCTCTCTCCCTCCGCAGCTGGACCGCCAGATGGTCTATATaGTCTTGGTGGAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GALGITVPHKALSLRSWTARWSI*SWWRPH
Trigger: ATGGGGCCTCCACCAAGACCATATAGACCATCTGGC...GGTCCAGCTGCGGAGGGAGAGAGCCTTGTGTGGGACTGTTATTCCCAGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp ACAGCCCTGTACACCATCGCAGGTATGGTGCCTGCAGCAGGGAGGTCCACCCAGGGTAGACAGGAACAGTaGGGTGTTTTGGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: TALYTIAGMVPAAGRSTQGRQEQ*GVLDWR
Trigger: TCTCCAGTCCAAAACACCTCACTGTTCCTGTCTACC...CTGGGTGGACCTCCCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCAGCTATCACCTTCTGTaGCTGGCTGATCATCTTCCG +
Preference number: 4 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCSYHLL*LADHLP
Trigger: CGGAAGATGATCAGCCAGGCACAGAAGGTGATAGCT...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp ACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAATTGCCAACACCACCTaGCACCTGCCACGTACAGAC +
Preference number: 4 (lower is better)
Translates to: TCHLPRTDAMHMFRDPHTIANTT*HLPRTD
Trigger: GTCTGTACGTGGCAGGTGGCAGGTGGTGTTGGCAAT...TGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp TGCCTGGGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGGCCAGGGCTTGGCCATaGCGGGCCCTGACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: CLGSSSNCLKACTKCQEVARAWP*RALTPR
Trigger: CCTCGGGGTCAGGGCCCGGCATGGCCAAGCCCTGGC...CACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp TGCAGGATTCATGCCGTTGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTGGGTTCTGGCTCCACCCACGTaGGCAGGTACTCAAACATGT +
Preference number: 4 (lower is better)
Translates to: CRIHAVGVLGSIAGSGWVLAPPT*AGTQTC
Trigger: ACATGTTTGAGTACCTGCCCACGTGGGTGGAGCCAG...AACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCATGAATCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp AGGTCACCCAGGGAGTGGCTTGCTGGAGCCCTGGGAATAACAGTCCCACACAAGTTGTCTGTGGAGCGCTaGGCCTGCATCCTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: RSPREWLAGALGITVPHKLSVER*ACILFN
Trigger: GTTGAAGAGGATGCAGGCCCAGCGCTCCACAGACAA...CTTGTGTGGGACTGTTATTCCCAGGGCTCCAGCAAGCCACTCCCTGGGTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp TGTACAAAATGCCAAGAGGTGATGCTACCTCCTGCAGGACAAAGGCCAGGGAGGCCCTGCCATCGGTCATaGGGCGGGCATTTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CTKCQEVMLPPAGQRPGRPCHRS*GGHFGP
Trigger: TGGCCCAAAATGCCCGCCCCATGACCGATGGCAGGG...CCTCCCTGGCCTTTGTCCTGCAGGAGGTAGCATCACCTCTTGGCATTTTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CACACAAGGCTCTCTCCCTCCGCAGCTGGACCTGTACGCGGGGGCTCTGTTTGTAGACAGTTTGGAGTATaGGATTCCGAAGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: HTRLSPSAAGPVRGGSVCRQFGV*DSEGTR
Trigger: CCGAGTCCCTTCGGAATCCCATACTCCAAACTGTCT...ACAAACAGAGCCCCCGCGTACAGGTCCAGCTGCGGAGGGAGAGAGCCTTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGTTTCTAACCCTTGAATaGCACTTGTTCATTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PSQWALVGPGGLSALRVMFLTLE*HLFICS
Trigger: AGAGCAAATGAACAAGTGCCATTCAAGGGTTAGAAA...CATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp TTGGACTGGAGAGGAAAAAGCCCCGGCTTGAGCCCGCCAGATGGTCTATATGGTGTGCGTACTTGGGGTTaGCGAGCTTCTTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: LDWRGKSPGLSPPDGLYGVRTWG*RASWPQ
Trigger: CTGTGGCCAAGAAGCTCGTCAACCCCAAGTACGCAC...ACCATATAGACCATCTGGCGGGCTCAAGCCGGGGCTTTTTCCTCTCCAGTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp CACTGGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAATGGCACTTGTTCATTACGGCCGGAGCTGCCTaGGTGGCTGTCCTGGTCACT +
Preference number: 4 (lower is better)
Translates to: HWDPVAEQFLTLEWHLFITAGAA*VAVLVT
Trigger: AGTGACCAGGACAGCCACTCAGGCAGCTCCGGCCGT...AATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp ACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCCCTCTTCAACGCATCTaGTTCTTCTCTTCCCCGACT +
Preference number: 4 (lower is better)
Translates to: TCHVQTPCTCFETPTQGTPLQRI*FFSSPT
Trigger: AGTCGGGGAAGAGAAGAAGCAGATGCGTTGAAGAGG...GGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR GCA 90 bp AATGGCACTTGTTCATTTGCTCTGAGCCTCACACAAACCCTCGGTCTGAATACAGCTCCTCGGTGGCCCTaGCATCGGTCATGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: NGTCSFALSLTQTLGLNTAPRWP*HRSWGG
Trigger: CCCGCCCCATGACCGATGGCAGGGCCACCGAGGAGC...TGTATTCAGACCGAGGGTTTGTGTGAGGCTCAGAGCAAATGAACAAGTGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp TTGGACTGGAGAGGAAAAAGCCCCGGCTTGAGCCCGCCAGATGGTCTATATGGTGGTGATGCTACCTCCTaGAGGACAAAGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LDWRGKSPGLSPPDGLYGGDATS*RTKARE
Trigger: CTCCCTGGCCTTTGTCCTGCAGGAGGTAGCATCACC...ACCATATAGACCATCTGGCGGGCTCAAGCCGGGGCTTTTTCCTCTCCAGTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACAACAAACATGAACTTCTaGGCCAGGGCACCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: PPATCHVQTPCTCFETPTTNMNF*ARAPLN
Trigger: GTTCAAGGGTGCCCTGGCCCAGAAGTTCATGTTTGT...TGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CCA 90 bp TGCAGGATTCATGCCGTTGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTGGGTTATCCTGGGTAGCCTATaGTCTGTCCCATTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CRIHAVGVLGSIAGSGWVILGSL*SVPFWG
Trigger: TCCCCAGAATGGGACAGACCATAGGCTACCCAGGAT...AACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCATGAATCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp TGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTTTTGGGAAAGGCATTaGCCACTTTGGACTTTATTA +
Preference number: 4 (lower is better)
Translates to: WALVGPGGLSALRVMSLGFWERH*PLWTLL
Trigger: TAATAAAGTCCAAAGTGGCCAATGCCTTTCCCAAAA...GCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp TGCCTGGGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGGGGCCAGGGCACCCTTaGACTTGGTTGCCGACCGCG +
Preference number: 4 (lower is better)
Translates to: CLGSSSNCLKACTKCQEVGPGHP*TWLPTA
Trigger: CGCGGTCGGCAACCAAGTTCAAGGGTGCCCTGGCCC...CACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp TCCCTCCGCAGCTGGACCTGTACGCGGGGGCTCTGTTTGTGCACATCTGCCTGGGCAGTTTCTAACCCTTaGATGGCACTTGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: SLRSWTCTRGLCLCTSAWAVSNP*MALVHL
Trigger: CAAATGAACAAGTGCCATTCAAGGGTTAGAAACTGC...CCAGGCAGATGTGCACAAACAGAGCCCCCGCGTACAGGTCCAGCTGCGGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp TGCCTGGGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGCACTGCTGCCGGGGGTaGGTGGGCAAGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CLGSSSNCLKACTKCQEVHCCRG*VGKVQL
Trigger: GAGCTGGACCTTGCCCACCCACCCCCGGCAGCAGTG...CACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCCCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGAGGAAAGAAGAGAGCTaGGAGAGATTGGCGATACTA +
Preference number: 4 (lower is better)
Translates to: PRTDAMHMFRDPHTGDLPRKEES*ERLAIL
Trigger: TAGTATCGCCAATCTCTCCCAGCTCTCTTCTTTCCT...CGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp TGCCTGGGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGCTCTCCCTCCGCAGCTaGACCTGTACGCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: CLGSSSNCLKACTKCQEVLSLRS*TCTRGL
Trigger: GAGCCCCCGCGTACAGGTCCAGCTGCGGAGGGAGAG...CACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCCCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp CACTGGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAATGGCACTTGTTCATTTCTCCAGGATGCGCTTaGGCTCCAGCTCCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HWDPVAEQFLTLEWHLFISPGCA*APAPRG
Trigger: TCCTCTCGGAGCTGGAGCTCAAGCGCATCCTGGAGA...AATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp CACTGGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAATGGCACTTGTTCATTTCCGCACCACCTCTTTaGTGTGGGCCTGCCCGTCTA +
Preference number: 4 (lower is better)
Translates to: HWDPVAEQFLTLEWHLFISAPPL*CGPARL
Trigger: TAGACGGGCAGGCCCACATCAAAGAGGTGGTGCGGA...AATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp CACTGGGACCCTGTGGCTGAGCAGTTTCTAACCCTTGAATGGCACTTGTTCATTATCCAGGCAGCAGGCTaGCTCTTCCATGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: HWDPVAEQFLTLEWHLFIIQAAG*LFHVPL
Trigger: AAGTGGGACATGGAAGAGGCAGCCTGCTGCCTGGAT...AATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGGGTCCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp TGTACAAAATGCCAAGAGGTGATGCTACCTCCTGCAGGACAAAGGCCAGGGAGGACAAACATGAACTTCTaGGCCAGGGCACCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: CTKCQEVMLPPAGQRPGRTNMNF*ARAPLN
Trigger: GTTCAAGGGTGCCCTGGCCCAGAAGTTCATGTTTGT...CCTCCCTGGCCTTTGTCCTGCAGGAGGTAGCATCACCTCTTGGCATTTTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp CACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGCATTGGCCACTTTaGACTTTATTAGCAACAGTA +
Preference number: 4 (lower is better)
Translates to: HLPPATYRRHAHVSRPPHRHWPL*TLLATV
Trigger: TACTGTTGCTAATAAAGTCCAAAGTGGCCAATGCCT...GTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp GGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGATGCTACTGCTTCTCTGCCCATaGGCAATCGAGCGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GSSSNCLKACTKCQEVMLLLLCP*AIERAL
Trigger: CAGCGCCCGCTCGATTGCTCATGGGCAGAGAAGCAG...TAGCATCACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGATGCTAGTCCCTCGGGTTATATaGGGGGCACTCAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GSSSNCLKACTKCQEVMLVPRVI*GALSCR
Trigger: CCGGCAGCTGAGTGCCCCCCATATAACCCGAGGGAC...TAGCATCACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp TGCCTGGGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGATGCCGTTGGGGTTCTaGGTAGCATCGCTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: CLGSSSNCLKACTKCQEVMPLGF*VASLGV
Trigger: CACTCCCAGCGATGCTACCCAGAACCCCAACGGCAT...CACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCCCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388995.11
3UTR CAA 72 bp CCTGTGGCTGAGCAGTTTCTAACCCTTGAATGGCACTaGTTCATTTGCTCTGAGCCTCACACAAACCCTCGG +
Preference number: 4 (lower is better)
Translates to: PVAEQFLTLEWH*FICSEPHTNPR
Trigger: CCGAGGGTTTGTGTGAGGCTCAGAGCAAATGAACAAGTGCCATTCAAGGGTTAGAAACTGCTCAGCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp TTGGACTGGAGAGGAAAAAGCCCCGGCTTGAGCCCGCCAGATGGTCTATATGGTTTACTTTTGCTTCCTTaGATCGACAATCGGAAACCT +
Preference number: 4 (lower is better)
Translates to: LDWRGKSPGLSPPDGLYGLLLLP*IDNRKP
Trigger: AGGTTTCCGATTGTCGATTCAAGGAAGCAAAAGTAA...ACCATATAGACCATCTGGCGGGCTCAAGCCGGGGCTTTTTCCTCTCCAGTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp TGCCTGGGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGACCCTTGAACTTGGTTaGCGACCGCGTGAAGAACTC +
Preference number: 4 (lower is better)
Translates to: CLGSSSNCLKACTKCQEVTLELG*RPREEL
Trigger: GAGTTCTTCACGCGGTCGGCAACCAAGTTCAAGGGT...CACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCCCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp AATGGCACTTGTTCATTTGCTCTGAGCCTCACACAAACCCTCGGTCTGAATACACTTGGCCTTGACAAGTaGGTACTTGGGGTTGACGAG +
Preference number: 4 (lower is better)
Translates to: NGTCSFALSLTQTLGLNTLGLDK*VLGVDE
Trigger: CTCGTCAACCCCAAGTACGCACTTGTCAAGGCCAAG...TGTATTCAGACCGAGGGTTTGTGTGAGGCTCAGAGCAAATGAACAAGTGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR TCA 90 bp TGCCTGGGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGTCACACTGTGTGACATaGGGTACAGCTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: CLGSSSNCLKACTKCQEVSHCVT*GTAPGT
Trigger: AGTTCCAGGAGCTGTACCTCATGTCACACAGTGTGA...CACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCCCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp ATGAACACTTTAGAAGCCTCAGGAAGGTCCTCAAATGTCAAGAAAAATTACTTTCCGAAGGGACTCGGATaGTCCTCGGTGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: MNTLEASGRSSNVKKNYFPKGLG*SSVALP
Trigger: TGGCAGGGCCACCGAGGAGCATCCGAGTCCCTTCGG...AAAGTAATTTTTCTTGACATTTGAGGACCTTCCTGAGGCTTCTAAAGTGTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp AATGGCACTTGTTCATTTGCTCTGAGCCTCACACAAACCCTCGGTCTGAATACAATGAGGTACAGCTCCTaGAACTGCCGGTCAAACATC +
Preference number: 4 (lower is better)
Translates to: NGTCSFALSLTQTLGLNTMRYSS*NCRSNI
Trigger: GATGTTTGACCGGCAGTTCCAGGAGCTGTACCTCAT...TGTATTCAGACCGAGGGTTTGTGTGAGGCTCAGAGCAAATGAACAAGTGCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp AATGGCACTTGTTCATTTGCTCTGAGCCTCACACAAACCCTCGGTCTGAATACATCTCAGAGGAGATCTTaGCAATCTCGTCGACGCTCT +
Preference number: 4 (lower is better)
Translates to: NGTCSFALSLTQTLGLNTSQRRS*QSRRRS
Trigger: AGAGCGTCGACGAGATTGCCAAGATCTCCTCTGAGA...TGTATTCAGACCGAGGGTTTGTGTGAGGCTCAGAGCAAATGAACAAGTGCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGATGCTACTTGAGCCCGCCAGATaGTCTATATGGTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GSSSNCLKACTKCQEVMLLEPAR*SIWSWW
Trigger: CCACCAAGACCATATAGACCATCTGGCGGGCTCAAG...TAGCATCACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGATGCTATTGTGCACATCTGCCTaGGCTGGAACTTCTACCTCT +
Preference number: 4 (lower is better)
Translates to: GSSSNCLKACTKCQEVMLLCTSA*AGTSTS
Trigger: AGAGGTAGAAGTTCCAGCCCAGGCAGATGTGCACAA...TAGCATCACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp ATGAACACTTTAGAAGCCTCAGGAAGGTCCTCAAATGTCAAGAAAAATTACTTTACCCAGGGAGTGGCTTaGTGGAGCCCTGGGAATAAC +
Preference number: 4 (lower is better)
Translates to: MNTLEASGRSSNVKKNYFTQGVA*WSPGNN
Trigger: GTTATTCCCAGGGCTCCAGCAAGCCACTCCCTGGGT...AAAGTAATTTTTCTTGACATTTGAGGACCTTCCTGAGGCTTCTAAAGTGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR GCA 90 bp ATGAACACTTTAGAAGCCTCAGGAAGGTCCTCAAATGTCAAGAAAAATTACTTTCACGTACAGACGCCATaGACATGTTTCGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: MNTLEASGRSSNVKKNYFHVQTP*TCFETP
Trigger: GGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTG...AAAGTAATTTTTCTTGACATTTGAGGACCTTCCTGAGGCTTCTAAAGTGTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp GGCAGCTCCTCCAATTGTTTAAAAGCATGTACAAAATGCCAAGAGGTGATGCTAAACAGTGAGGTGTTTTaGACTGGAGAGGAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: GSSSNCLKACTKCQEVMLNSEVF*TGEEKA
Trigger: GGCTTTTTCCTCTCCAGTCCAAAACACCTCACTGTT...TAGCATCACCTCTTGGCATTTTGTACATGCTTTTAAACAATTGGAGGAGCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CCA 90 bp ATGAACACTTTAGAAGCCTCAGGAAGGTCCTCAAATGTCAAGAAAAATTACTTTTCTATATGGTCTTGGTaGAGGCCCCATCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: MNTLEASGRSSNVKKNYFSIWSW*RPHPSL
Trigger: CAGAGAGGGATGGGGCCTCCACCAAGACCATATAGA...AAAGTAATTTTTCTTGACATTTGAGGACCTTCCTGAGGCTTCTAAAGTGTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS CCA 90 bp CTCCGCGGCCTCTGCTTCTCTGCCCATGAGCAATCGAGCGGGCGCTaGCGGAGCGGGGCGCACACGCGGCGGCTGCGGCGGCGGCGCGAG +
Preference number: 5 (lower is better)
Translates to: LRGLCFSAHEQSSGR*RSGAHTRRLRRRRE
Trigger: CTCGCGCCGCCGCCGCAGCCGCCGCGTGTGCGCCCCGCTCCGCCAGCGCCCGCTCGATTGCTCATGGGCAGAGAAGCAGAGGCCGCGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS TCA 90 bp ACCGCGCGCTCGGGGGCCTCTCCGCGGCCTCTGCTTCTCTGCCCATaGGCAATCGAGCGGGCGCTGGCGGAGCGGGGCGCACACGCGGCG +
Preference number: 5 (lower is better)
Translates to: TARSGASPRPLLLCP*AIERALAERGAHAA
Trigger: CGCCGCGTGTGCGCCCCGCTCCGCCAGCGCCCGCTCGATTGCTCATGGGCAGAGAAGCAGAGGCCGCGGAGAGGCCCCCGAGCGCGCGGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS CCA 90 bp GAGAGAAGGCCATGGCGCCGCCTGCCCGGGCACTGCTGCCGGGGGTaGGTGGGCAAGGTCCAGCTCCTAGCTCCGGCCCAGCTGGGGCAC +
Preference number: 5 (lower is better)
Translates to: ERRPWRRLPGHCCRG*VGKVQLLAPAQLGH
Trigger: GTGCCCCAGCTGGGCCGGAGCTAGGAGCTGGACCTTGCCCACCCACCCCCGGCAGCAGTGCCCGGGCAGGCGGCGCCATGGCCTTCTCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 90 bp CTGGGCTCTGGGGGAGGGCAAGGCTCTGGACGGGGCCTGCTGTCCTaGCTCTGCTTCCACAGCTGGTGCTGGGCGCTGGCCTGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: LGSGGGQGSGRGLLS*LCFHSWCWALAWEV
Trigger: CACCTCCCAGGCCAGCGCCCAGCACCAGCTGTGGAAGCAGAGCCAGGACAGCAGGCCCCGTCCAGAGCCTTGCCCTCCCCCAGAGCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS-3UTR CAA 90 bp CCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTGGTGGGGTTGGCCCGTaGGCCACTTGCTCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: PAVPVGSGRPRRPVCPPRGGVGP*ATCSEW
Trigger: CCACTCAGAGCAAGTGGCCAACGGGCCAACCCCACC...ACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp GTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGGGCCCAGAGAGGGCCTaGCCCGAGGTCACCCAGGGA +
Preference number: 5 (lower is better)
Translates to: VPVGSGRPRRPVCPPRHEGPERA*PEVTQG
Trigger: TCCCTGGGTGACCTCGGGCAAGGCCCTCTCTGGGCC...CTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp CCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTTGGGGAGCTTCCTCTTaGGGGAGCTCCAGGACCCAG +
Preference number: 5 (lower is better)
Translates to: PAVPVGSGRPRRPVCPPRWGASS*GSSRTQ
Trigger: CTGGGTCCTGGAGCTCCCCAAAGAGGAAGCTCCCCA...ACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp GCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGGGCGCGGTGGTGGGGTaGGCCCGTTGGCCACTTGCT +
Preference number: 5 (lower is better)
Translates to: ANVSRPSHLPAVPVGSGRGAVVG*ARWPLA
Trigger: AGCAAGTGGCCAACGGGCCAACCCCACCACCGCGCC...CCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS GCA 90 bp GCACTCAGCTGCCGGCGCGGTGGTGGGGTTGGCCCGTTGGCCACTTaGTCTGAGTGGCGCCTCCGGAGAGGGACTGAGTGCTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: ALSCRRGGGVGPLAT*SEWRLRRGTECSLT
Trigger: GGTGAGAGAGCACTCAGTCCCTCTCCGGAGGCGCCACTCAGAGCAAGTGGCCAACGGGCCAACCCCACCACCGCGCCGGCAGCTGAGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
ENST00000580115.1
CDS-3UTR CAA 90 bp TCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCTGGGCCAGGGCACCCTaGAACTTGGTTGCCGACCGC +
Preference number: 5 (lower is better)
Translates to: SHLPAVPVGSGRPRRPVCWARAP*NLVADR
Trigger: GCGGTCGGCAACCAAGTTCAAGGGTGCCCTGGCCCA...GCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp GCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGTGGCCCTGTGCCTCCTaGTCTGTGGAGCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: ANVSRPSHLPAVPVGSGRWPCAS*SVERWA
Trigger: GGCCCAGCGCTCCACAGACAAGGAGGCACAGGGCCA...CCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp TGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCCATGGGGCGGGCATTTaGGGCCAGTCTTGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: WALVGPGGLSALRVMSLGHGAGI*GQSWAA
Trigger: GGCAGCCCAAGACTGGCCCAAAATGCCCGCCCCATG...GCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS TCA 90 bp TCGCTGGAGCGCCAGTTCACATGGTTGTCGTCCAGACACTGCACCTaGGAGAAGGCCATGGCGCCGCCTGCCCGGGCACTGCTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: SLERQFTWLSSRHCT*EKAMAPPARALLPG
Trigger: CCCCGGCAGCAGTGCCCGGGCAGGCGGCGCCATGGCCTTCTCTCAGGTGCAGTGTCTGGACGACAACCATGTGAACTGGCGCTCCAGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp CTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCCGCCAGTTCACATGGTaGTCGTCCAGACACTGCACC +
Preference number: 5 (lower is better)
Translates to: LPSQWALVGPGGLSALRVRQFTW*SSRHCT
Trigger: GGTGCAGTGTCTGGACGACAACCATGTGAACTGGCG...GACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp CCTGCAGCAGGGAGGTCCACCCAGGGGACGTGTAAAGGGGTCAGAAGGCCACCTGGCGCGGTGGTGGGGTaGGCCCGTTGGCCACTTGCT +
Preference number: 5 (lower is better)
Translates to: PAAGRSTQGTCKGVRRPPGAVVG*ARWPLA
Trigger: AGCAAGTGGCCAACGGGCCAACCCCACCACCGCGCC...AGGTGGCCTTCTGACCCCTTTACACGTCCCCTGGGTGGACCTCCCTGCTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp CCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCTTCCCTCCAGGACCATaGCCAACACCACCTGCCACC +
Preference number: 5 (lower is better)
Translates to: PTFLPSQWALVGPGGLSAFPPGP*PTPPAT
Trigger: GGTGGCAGGTGGTGTTGGCAATGGTCCTGGAGGGAA...GGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS CCA 90 bp AGTTCACATGGTTGTCGTCCAGACACTGCACCTGAGAGAAGGCCATaGCGCCGCCTGCCCGGGCACTGCTGCCGGGGGTGGGTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: SSHGCRPDTAPERRP*RRLPGHCCRGWVGK
Trigger: CTTGCCCACCCACCCCCGGCAGCAGTGCCCGGGCAGGCGGCGCCATGGCCTTCTCTCAGGTGCAGTGTCTGGACGACAACCATGTGAACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 90 bp CAAGGCTCTGGACGGGGCCTGCTGTCCTGGCTCTGCTTCCACAGCTaGTGCTGGGCGCTGGCCTGGGAGGTGTCACGGATCTTGATGCGG +
Preference number: 5 (lower is better)
Translates to: QGSGRGLLSWLCFHS*CWALAWEVSRILMR
Trigger: CCGCATCAAGATCCGTGACACCTCCCAGGCCAGCGCCCAGCACCAGCTGTGGAAGCAGAGCCAGGACAGCAGGCCCCGTCCAGAGCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 90 bp TGCCGGCGCGGTGGTGGGGTTGGCCCGTTGGCCACTTGCTCTGAGTaGCGCCTCCGGAGAGGGACTGAGTGCTCTCTCACCTCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: CRRGGGVGPLATCSE*RLRRGTECSLTSKY
Trigger: GTACTTCGAGGTGAGAGAGCACTCAGTCCCTCTCCGGAGGCGCCACTCAGAGCAAGTGGCCAACGGGCCAACCCCACCACCGCGCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
ENST00000580115.1
CDS-3UTR CAA 90 bp CGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATGGGTTGACGAGCTTCTaGGCCACAGTGCCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: RHAHVSRPPHRGPAVDRDGLTSF*ATVPAG
Trigger: GCCCGCGGGCACTGTGGCCAAGAAGCTCGTCAACCC...ATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 90 bp TGGTGGGGGCCAGCCATGGCTGGGCCAGCGTTTCTGGTAGAGCTCTaGACGCTGTCAGCAGCAGAGCGGTACCTAGGGGGTCCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: WWGPAMAGPAFLVEL*TLSAAERYLGGPGK
Trigger: CTTCCCAGGACCCCCTAGGTACCGCTCTGCTGCTGACAGCGTCCAGAGCTCTACCAGAAACGCTGGCCCAGCCATGGCTGGCCCCCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 90 bp TTCCGAAGGGACTCGGATGCTCCTCGGTGGCCCTGCCATCGGTCATaGGGCGGGCATTTTGGGCCAGTCTTGGGCTGCCGGGATCCGGAA +
Preference number: 5 (lower is better)
Translates to: FRRDSDAPRWPCHRS*GGHFGPVLGCRDPE
Trigger: TTCCGGATCCCGGCAGCCCAAGACTGGCCCAAAATGCCCGCCCCATGACCGATGGCAGGGCCACCGAGGAGCATCCGAGTCCCTTCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 90 bp CATGACCCTGCTTCCTCCGCCCAGCCCCCGTGCACCCATAGCCGCTaGGCCTCAGACTGTGGCCACAGGGCCCTGGGATCAAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: HDPASSAQPPCTHSR*ASDCGHRALGSRSE
Trigger: TTCACTTCTTGATCCCAGGGCCCTGTGGCCACAGTCTGAGGCCCAGCGGCTATGGGTGCACGGGGGCTGGGCGGAGGAAGCAGGGTCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS-3UTR CAA 90 bp GCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGAGGGCACCCTTGAACTaGGTTGCCGACCGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: ANVSRPSHLPAVPVGSGRRAPLN*VADRVK
Trigger: CTTCACGCGGTCGGCAACCAAGTTCAAGGGTGCCCT...CCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp CACACAAGGCTCTCTCCCTCCGCAGCTGGACCTGTACGCGGGGGCTCTGTTTGTCCCACAGCGAGCCCTTaGGAGTCTGGCACTGCCCGG +
Preference number: 5 (lower is better)
Translates to: HTRLSPSAAGPVRGGSVCPTASP*ESGTAR
Trigger: CCGGGCAGTGCCAGACTCCAAAGGGCTCGCTGTGGG...ACAAACAGAGCCCCCGCGTACAGGTCCAGCTGCGGAGGGAGAGAGCCTTGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS CCA 90 bp CTGCTGTCCTGGCTCTGCTTCCACAGCTGGTGCTGGGCGCTGGCCTaGGAGGTGTCACGGATCTTGATGCGGTTCATCTGGCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LLSWLCFHSWCWALA*EVSRILMRFIWLGW
Trigger: CCAGCCCAGCCAGATGAACCGCATCAAGATCCGTGACACCTCCCAGGCCAGCGCCCAGCACCAGCTGTGGAAGCAGAGCCAGGACAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 90 bp TACCTGACCTCCCTTGGCCTGCCAGTGGTGGGGGCCAGCCATGGCTaGGCCAGCGTTTCTGGTAGAGCTCTGGACGCTGTCAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: YLTSLGLPVVGASHG*ASVSGRALDAVSSR
Trigger: TCTGCTGCTGACAGCGTCCAGAGCTCTACCAGAAACGCTGGCCCAGCCATGGCTGGCCCCCACCACTGGCAGGCCAAGGGAGGTCAGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp GCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATGGTCTCCAGGATGCGCTaGAGCTCCAGCTCCGAGAGG +
Preference number: 5 (lower is better)
Translates to: AMHMFRDPHTGDLPWTGMVSRMR*SSSSER
Trigger: CCTCTCGGAGCTGGAGCTCAAGCGCATCCTGGAGAC...CATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp CATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTCGCACTCTGAGATTCTaGAGGTGCCCCAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: HPTFLPSQWALVGPGGLSRTLRF*RCPRCM
Trigger: CATGCACCTGGGGCACCTCAAGAATCTCAGAGTGCG...AGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp GTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGGAGGTGTCACGGATCTaGATGCGGTTCATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VPVGSGRPRRPVCPPRHEEVSRI*MRFIWL
Trigger: CAGCCAGATGAACCGCATCAAGATCCGTGACACCTC...CTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp GTACTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGGGGAGCTTCCTCTTaGGGGAGCTCCAGGACCCAG +
Preference number: 5 (lower is better)
Translates to: VLVHRPGECQRLPPIPPSWGASS*GSSRTQ
Trigger: CTGGGTCCTGGAGCTCCCCAAAGAGGAAGCTCCCCA...GGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp CTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCATTTTGGGCCAGTCTaGGGCTGCCGGGATCCGGAA +
Preference number: 5 (lower is better)
Translates to: LVHRPGECQRLPPIPPSCHFGPV*GCRDPE
Trigger: TTCCGGATCCCGGCAGCCCAAGACTGGCCCAAAATG...GCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp GCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATGCCAGCCACACCCGCATaGGCTCAGCGCTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: AMHMFRDPHTGDLPWTGMPATPA*AQRLMV
Trigger: CACCATCAAGCGCTGAGCCAATGCGGGTGTGGCTGG...CATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp ACACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCCCCCCTCCAGCAACCTaGCTTCCACTGGCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: TPPATCHVQTPCTCFETPPPPAT*LPLAGG
Trigger: GCCCCCTGCCAGTGGAAGCAAGGTTGCTGGAGGGGG...GGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTGT
64% GC, longest homopolymer 10 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS GCA 90 bp TGGAGTATGGGATTCCGAAGGGACTCGGATGCTCCTCGGTGGCCCTaGCATCGGTCATGGGGCGGGCATTTTGGGCCAGTCTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: WSMGFRRDSDAPRWP*HRSWGGHFGPVLGC
Trigger: GCAGCCCAAGACTGGCCCAAAATGCCCGCCCCATGACCGATGGCAGGGCCACCGAGGAGCATCCGAGTCCCTTCGGAATCCCATACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 90 bp GCTCCGGGTCTGGCTCCACCCACGTGGGCAGGTACTCAAACATGTTaGCCCTCTCCAGGTGAAGCAGTCCTGGGTGGATGGGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: APGLAPPTWAGTQTC*PSPGEAVLGGWVAA
Trigger: TGCTGCCACCCATCCACCCAGGACTGCTTCACCTGGAGAGGGCCAACATGTTTGAGTACCTGCCCACGTGGGTGGAGCCAGACCCGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 90 bp AGCCCAGGATGTCGCTGCCAGGCTCCGGGTCTGGCTCCACCCACGTaGGCAGGTACTCAAACATGTTGGCCCTCTCCAGGTGAAGCAGTC +
Preference number: 5 (lower is better)
Translates to: SPGCRCQAPGLAPPT*AGTQTCWPSPGEAV
Trigger: GACTGCTTCACCTGGAGAGGGCCAACATGTTTGAGTACCTGCCCACGTGGGTGGAGCCAGACCCGGAGCCTGGCAGCGACATCCTGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 90 bp ACGGCCTGGCCACACCCCACCTCCAGGCCGGTGACATCTCCAAGCTaGAACAACAGCGTCCTCAGACAAAGCCCTTCTCTGCCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: TAWPHPTSRPVTSPS*NNSVLRQSPSLPAS
Trigger: GGAGGCAGGCAGAGAAGGGCTTTGTCTGAGGACGCTGTTGTTCCAGCTTGGAGATGTCACCGGCCTGGAGGTGGGGTGTGGCCAGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS-3UTR CAA 90 bp GCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTCTCCAGGATGCGCTaGAGCTCCAGCTCCGAGAGG +
Preference number: 5 (lower is better)
Translates to: ATYRRHAHVSRPPHRGPAVSRMR*SSSSER
Trigger: CCTCTCGGAGCTGGAGCTCAAGCGCATCCTGGAGAC...GGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp CTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGCACTCTGAGATTCTaGAGGTGCCCCAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: LVHRPGECQRLPPIPPSCRTLRF*RCPRCM
Trigger: CATGCACCTGGGGCACCTCAAGAATCTCAGAGTGCG...GCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp ACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGTTGACGAGCTTCTaGGCCACAGTGCCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: TCHLPRTDAMHMFRDPHTGLTSF*ATVPAG
Trigger: GCCCGCGGGCACTGTGGCCAAGAAGCTCGTCAACCC...TGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp GGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCGAGGTGTCACGGATCTaGATGCGGTTCATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GECQRLPPIPPSCRPSGLEVSRI*MRFIWL
Trigger: CAGCCAGATGAACCGCATCAAGATCCGTGACACCTC...GAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp CACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACATGGGGCGGGCATTTaGGGCCAGTCTTGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HHLPPATYRRHAHVSRPPHGAGI*GQSWAA
Trigger: GGCAGCCCAAGACTGGCCCAAAATGCCCGCCCCATG...TGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS GCA 90 bp CTCCTTGTCTGTGGAGCGCTGGGCCTGCATCCTCTTCAACGCATCTaGTTCTTCTCTTCCCCGACTCTGGGCCCATGGGGAGCCACCCTG +
Preference number: 5 (lower is better)
Translates to: LLVCGALGLHPLQRI*FFSSPTLGPWGATL
Trigger: CAGGGTGGCTCCCCATGGGCCCAGAGTCGGGGAAGAGAAGAAGCAGATGCGTTGAAGAGGATGCAGGCCCAGCGCTCCACAGACAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
ENST00000580115.1
CDS CCA 90 bp GGGCAGGTACTCAAACATGTTGGCCCTCTCCAGGTGAAGCAGTCCTaGGTGGATGGGTGGCAGCAGCTCGGGGAGTTCCCCTGGATGCTC +
Preference number: 5 (lower is better)
Translates to: GQVLKHVGPLQVKQS*VDGWQQLGEFPWML
Trigger: GAGCATCCAGGGGAACTCCCCGAGCTGCTGCCACCCATCCACCCAGGACTGCTTCACCTGGAGAGGGCCAACATGTTTGAGTACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 90 bp CGTGCACCCATAGCCGCTGGGCCTCAGACTGTGGCCACAGGGCCCTaGGATCAAGAAGTGAATGGGGGCAGAGAGCAGGTGCATACTGTG +
Preference number: 5 (lower is better)
Translates to: RAPIAAGPQTVATGP*DQEVNGGREQVHTV
Trigger: CACAGTATGCACCTGCTCTCTGCCCCCATTCACTTCTTGATCCCAGGGCCCTGTGGCCACAGTCTGAGGCCCAGCGGCTATGGGTGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 90 bp CCCCTGGTGTGCAGGGACCCTGACCCACCTGTGCCTCCTTGTCTGTaGAGCGCTGGGCCTGCATCCTCTTCAACGCATCTGCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: PLVCRDPDPPVPPCL*SAGPASSSTHLLLL
Trigger: GAGAAGAAGCAGATGCGTTGAAGAGGATGCAGGCCCAGCGCTCCACAGACAAGGAGGCACAGGTGGGTCAGGGTCCCTGCACACCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS-3UTR CAA 90 bp CGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATCGCCAGTTCACATGGTaGTCGTCCAGACACTGCACC +
Preference number: 5 (lower is better)
Translates to: RHAHVSRPPHRGPAVDRDRQFTW*SSRHCT
Trigger: GGTGCAGTGTCTGGACGACAACCATGTGAACTGGCG...ATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp ACAGCCCTGTACACCATCGCAGGTATGGTGCCTGCAGCAGGGAGGTCCACCCAGAGGGCACCCTTGAACTaGGTTGCCGACCGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: TALYTIAGMVPAAGRSTQRAPLN*VADRVK
Trigger: CTTCACGCGGTCGGCAACCAAGTTCAAGGGTGCCCT...CTGGGTGGACCTCCCTGCTGCAGGCACCATACCTGCGATGGTGTACAGGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp CTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTGCAGTGCGTACTTGGGGTaGACGAGCTTCTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: LVHRPGECQRLPPIPPSCSAYLG*TSFLAT
Trigger: TGTGGCCAAGAAGCTCGTCAACCCCAAGTACGCACT...GCAGGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp GTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTTGACAAGTGCGTACTaGGGGTTGACGAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VPVGSGRPRRPVCPPRHELTSAY*GLTSFL
Trigger: CAAGAAGCTCGTCAACCCCAAGTACGCACTTGTCAA...CTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp ACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGCCCAGGCGGCCTGTCTGCCCTCTTGACAAGTGCGTACTaGGGGTTGACGAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TFLPSQWALVGPGGLSALLTSAY*GLTSFL
Trigger: CAAGAAGCTCGTCAACCCCAAGTACGCACTTGTCAA...GAGGGCAGACAGGCCGCCTGGGCCTACCAGAGCCCACTGGGACGGCAGGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp ACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATCGACGCTCTTGGCCTaGACAAGTGCGTACTTGGGG +
Preference number: 5 (lower is better)
Translates to: TPCTCFETPTQGTCRGPGSTLLA*TSAYLG
Trigger: CCCCAAGTACGCACTTGTCAAGGCCAAGAGCGTCGA...TCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp CCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGCATTTTGGGCCAGTCTaGGGCTGCCGGGATCCGGAA +
Preference number: 5 (lower is better)
Translates to: PRTDAMHMFRDPHTGDLPHFGPV*GCRDPE
Trigger: TTCCGGATCCCGGCAGCCCAAGACTGGCCCAAAATG...CGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp CCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGGGAAAAAGCCCCGGCTaGAGCCCGCCAGATGGTCTA +
Preference number: 5 (lower is better)
Translates to: PRTDAMHMFRDPHTGDLPGKSPG*SPPDGL
Trigger: TAGACCATCTGGCGGGCTCAAGCCGGGGCTTTTTCC...CGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp GGTAGGCCCAGGCGGCCTGTCTGCCCTCCGCGTCATGAGTCTGGGCTGGGGCCTACCCTTGAATGGCACTaGTTCATTTGCTCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: GRPRRPVCPPRHESGLGPTLEWH*FICSEP
Trigger: AGGCTCAGAGCAAATGAACAAGTGCCATTCAAGGGT...AGGCCCCAGCCCAGACTCATGACGCGGAGGGCAGACAGGCCGCCTGGGCCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCGCATTGGCTCAGCGCTaGATGGTGAGGTGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCALAQR*MVRWGC
Trigger: ACAGCCCCACCTCACCATCAAGCGCTGAGCCAATGC...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS TCA 90 bp GGCCAGGGCCACGGCCGGAGCTGCCTGAGTGGCTGTCCTGGTCACTaGGGGTTACGTAGTCGTCATCATCTTCTTCTTCCACCCCATCCA +
Preference number: 5 (lower is better)
Translates to: GQGHGRSCLSGCPGH*GLRSRHHLLLPPHP
Trigger: TGGATGGGGTGGAAGAAGAAGATGATGACGACTACGTAACCCTCAGTGACCAGGACAGCCACTCAGGCAGCTCCGGCCGTGGCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS TCA 90 bp GCGGTACCTAGGGGGTCCTGGGAAGCCGTCTTTATCCCTAGTCCCTaGGGCAGGGACCCTGTGATGATGAAACTGCTGGCCCTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: AVPRGSWEAVFIPSP*GRDPVMMKLLALCL
Trigger: GAGGCACAGGGCCAGCAGTTTCATCATCACAGGGTCCCTGCCTCAGGGACTAGGGATAAAGACGGCTTCCCAGGACCCCCTAGGTACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 90 bp CCTCCAGCGCCAGCCGCTGCTCCTCGCTGTAGAAGAACTCAGGCTTaGACTCGCTGGAGCGCCAGTTCACATGGTTGTCGTCCAGACACT +
Preference number: 5 (lower is better)
Translates to: PPAPAAAPRCRRTQA*TRWSASSHGCRPDT
Trigger: AGTGTCTGGACGACAACCATGTGAACTGGCGCTCCAGCGAGTCCAAGCCTGAGTTCTTCTACAGCGAGGAGCAGCGGCTGGCGCTGGAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 90 bp ATGAGGTACAGCTCCTGGAACTGCCGGTCAAACATCTCCACCACCTaGCCAGACAGCACAGAGATCACATTCCGGTCCGTCCGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: MRYSSWNCRSNISTT*PDSTEITFRSVRAA
Trigger: GGCCGCGCGGACGGACCGGAATGTGATCTCTGTGCTGTCTGGCCAGGTGGTGGAGATGTTTGACCGGCAGTTCCAGGAGCTGTACCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 90 bp GGCTACCGCCCGTCCTGGCCTTTAGGTGCTTCGACTGAGACAGTTTaGAGTATGGGATTCCGAAGGGACTCGGATGCTCCTCGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GYRPSWPLGASTETV*SMGFRRDSDAPRWP
Trigger: GGGCCACCGAGGAGCATCCGAGTCCCTTCGGAATCCCATACTCCAAACTGTCTCAGTCGAAGCACCTAAAGGCCAGGACGGGCGGTAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp ACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACTTCCGCACCACCTCTTaGATGTGGGCCTGCCCGTCT +
Preference number: 5 (lower is better)
Translates to: TTCHLPRTDAMHMFRDPHFRTTS*MWACPS
Trigger: AGACGGGCAGGCCCACATCAAAGAGGTGGTGCGGAA...GTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp ACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATCCATAGGGATGCCCTaGAGGCTCACACTGTGTGAC +
Preference number: 5 (lower is better)
Translates to: TPCTCFETPTQGTCRGPGSIGMP*RLTLCD
Trigger: GTCACACAGTGTGAGCCTCAAGGGCATCCCTATGGA...TCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp ACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGAATCTCGTCGACGCTCTaGGCCTTGACAAGTGCGTAC +
Preference number: 5 (lower is better)
Translates to: TPCTCFETPTQGTCRGPGISSTL*ALTSAY
Trigger: GTACGCACTTGTCAAGGCCAAGAGCGTCGACGAGAT...TCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp GCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGCAGGATTCATGCCGTaGGGGTTCTGGGTAGCATCG +
Preference number: 5 (lower is better)
Translates to: ATYRRHAHVSRPPHRGPAAGFMP*GFWVAS
Trigger: CGATGCTACCCAGAACCCCAACGGCATGAATCCTGC...GGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS TCA 90 bp GAGGCCCACTGGCTACCGCCCGTCCTGGCCTTTAGGTGCTTCGACTaGGACAGTTTGGAGTATGGGATTCCGAAGGGACTCGGATGCTCC +
Preference number: 5 (lower is better)
Translates to: EAHWLPPVLAFRCFD*DSLEYGIPKGLGCS
Trigger: GGAGCATCCGAGTCCCTTCGGAATCCCATACTCCAAACTGTCTCAGTCGAAGCACCTAAAGGCCAGGACGGGCGGTAGCCAGTGGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS GCA 90 bp CCGTTGGCCACTTGCTCTGAGTGGCGCCTCCGGAGAGGGACTGAGTaGTCTCTCACCTCGAAGTACTCCTCTGACACAGAGGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: PLATCSEWRLRRGTE*SLTSKYSSDTEEAT
Trigger: AGTGGCTTCCTCTGTGTCAGAGGAGTACTTCGAGGTGAGAGAGCACTCAGTCCCTCTCCGGAGGCGCCACTCAGAGCAAGTGGCCAACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
ENST00000580115.1
CDS CCA 90 bp CCAGCCGCTGCTCCTCGCTGTAGAAGAACTCAGGCTTGGACTCGCTaGAGCGCCAGTTCACATGGTTGTCGTCCAGACACTGCACCTGAG +
Preference number: 5 (lower is better)
Translates to: PAAAPRCRRTQAWTR*SASSHGCRPDTAPE
Trigger: CTCAGGTGCAGTGTCTGGACGACAACCATGTGAACTGGCGCTCCAGCGAGTCCAAGCCTGAGTTCTTCTACAGCGAGGAGCAGCGGCTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 90 bp ACAGTTTGGAGTATGGGATTCCGAAGGGACTCGGATGCTCCTCGGTaGCCCTGCCATCGGTCATGGGGCGGGCATTTTGGGCCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: TVWSMGFRRDSDAPR*PCHRSWGGHFGPVL
Trigger: CAAGACTGGCCCAAAATGCCCGCCCCATGACCGATGGCAGGGCCACCGAGGAGCATCCGAGTCCCTTCGGAATCCCATACTCCAAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 90 bp CCAGTTGGGAGCCAGAGGTACCTCTCGCACAACTTCCCTGAAAGCTaGAGAGTCACCTGTAGGAGCCGCACACAGCCCGGTCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: PVGSQRYLSHNFPES*RVTCRSRTQPGLHP
Trigger: TGGATGGAGACCGGGCTGTGTGCGGCTCCTACAGGTGACTCTCCAGCTTTCAGGGAAGTTGTGCGAGAGGTACCTCTGGCTCCCAACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 90 bp CTGGTACAGGATTCACTAAGCAGCTCAGGAAGGCCCTGGACACTGTaGGGGGTTCTGCATGTGGTGGCCGCTGCTGCCATGCGTCTATGC +
Preference number: 5 (lower is better)
Translates to: LVQDSLSSSGRPWTL*GVLHVVAAAAMRLC
Trigger: GCATAGACGCATGGCAGCAGCGGCCACCACATGCAGAACCCCCCACAGTGTCCAGGGCCTTCCTGAGCTGCTTAGTGAATCCTGTACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS-3UTR CAA 90 bp GTACTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCTTCTCAGAGGAGATCTaGGCAATCTCGTCGACGCTC +
Preference number: 5 (lower is better)
Translates to: VLVHRPGECQRLPPIPPSFSEEI*AISSTL
Trigger: GAGCGTCGACGAGATTGCCAAGATCTCCTCTGAGAA...GGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp TGTACAAAATGCCAAGAGGTGATGCTACCTCCTGCAGGACAAAGGCCAGGGAGGTGGCCCTGTGCCTCCTaGTCTGTGGAGCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: CTKCQEVMLPPAGQRPGRWPCAS*SVERWA
Trigger: GGCCCAGCGCTCCACAGACAAGGAGGCACAGGGCCA...CCTCCCTGGCCTTTGTCCTGCAGGAGGTAGCATCACCTCTTGGCATTTTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp CTGGGCTGGAACTTCTACCTCTCCACCATCCTCACGCTCGGCATCACAGCCCTGCTGGCTGAGAACCACTaGCCCAAGGCCGATGAGTGT +
Preference number: 5 (lower is better)
Translates to: LGWNFYLSTILTLGITALLAENH*PKADEC
Trigger: ACACTCATCGGCCTTGGGCAAGTGGTTCTCAGCCAG...CAGGGCTGTGATGCCGAGCGTGAGGATGGTGGAGAGGTAGAAGTTCCAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS GCA 90 bp AGAGGAGATCTTGGCAATCTCGTCGACGCTCTTGGCCTTGACAAGTaGGTACTTGGGGTTGACGAGCTTCTTGGCCACAGTGCCCGCGGG +
Preference number: 5 (lower is better)
Translates to: RGDLGNLVDALGLDK*VLGVDELLGHSARG
Trigger: CCCGCGGGCACTGTGGCCAAGAAGCTCGTCAACCCCAAGTACGCACTTGTCAAGGCCAAGAGCGTCGACGAGATTGCCAAGATCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 90 bp GATGATATTGATGTAGCCCAGGATGTCGCTGCCAGGCTCCGGGTCTaGCTCCACCCACGTGGGCAGGTACTCAAACATGTTGGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: DDIDVAQDVAARLRV*LHPRGQVLKHVGPL
Trigger: GAGAGGGCCAACATGTTTGAGTACCTGCCCACGTGGGTGGAGCCAGACCCGGAGCCTGGCAGCGACATCCTGGGCTACATCAATATCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 90 bp TGGGCGCTGGCCTGGGAGGTGTCACGGATCTTGATGCGGTTCATCTaGCTGGGCTGGGGGTTCCAGATGTTGGGGTCGATGATATTGATG +
Preference number: 5 (lower is better)
Translates to: WALAWEVSRILMRFI*LGWGFQMLGSMILM
Trigger: CATCAATATCATCGACCCCAACATCTGGAACCCCCAGCCCAGCCAGATGAACCGCATCAAGATCCGTGACACCTCCCAGGCCAGCGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 90 bp CCTCTTCAACGCATCTGCTTCTTCTCTTCCCCGACTCTGGGCCCATaGGGAGCCACCCTGGGGTCCAACAAAGGTCCCTCGGGTTATATG +
Preference number: 5 (lower is better)
Translates to: PLQRICFFSSPTLGP*GATLGSNKGPSGYM
Trigger: CATATAACCCGAGGGACCTTTGTTGGACCCCAGGGTGGCTCCCCATGGGCCCAGAGTCGGGGAAGAGAAGAAGCAGATGCGTTGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
ENST00000580115.1
CDS CCA 90 bp CAGGGTTCTGGGACCTTGTCCTGTGCCTCCTTGTCTGTGGAGCGCTaGGCCTGCATCCTCTTCAACGCATCTGCTTCTTCTCTTCCCCGA +
Preference number: 5 (lower is better)
Translates to: QGSGTLSCASLSVER*ACILFNASASSLPR
Trigger: TCGGGGAAGAGAAGAAGCAGATGCGTTGAAGAGGATGCAGGCCCAGCGCTCCACAGACAAGGAGGCACAGGACAAGGTCCCAGAACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580115.1
CDS-3UTR CAA 90 bp ACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACTCCATAGGGATGCCCTaGAGGCTCACACTGTGTGAC +
Preference number: 5 (lower is better)
Translates to: TTCHLPRTDAMHMFRDPHSIGMP*RLTLCD
Trigger: GTCACACAGTGTGAGCCTCAAGGGCATCCCTATGGA...GTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp TGCAGGATTCATGCCGTTGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTGGGTTTCGACGCTCTTGGCCTaGACAAGTGCGTACTTGGGG +
Preference number: 5 (lower is better)
Translates to: CRIHAVGVLGSIAGSGWVSTLLA*TSAYLG
Trigger: CCCCAAGTACGCACTTGTCAAGGCCAAGAGCGTCGA...AACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCATGAATCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp CGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTGGACCGGGATTGGGGGTTCCAGATGTaGGGGTCGATGATATTGATG +
Preference number: 5 (lower is better)
Translates to: RHAHVSRPPHRGPAVDRDWGFQM*GSMILM
Trigger: CATCAATATCATCGACCCCAACATCTGGAACCCCCA...ATCCCGGTCCACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTGCATGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 90 bp GGGATGCCCTTGAGGCTCACACTGTGTGACATGAGGTACAGCTCCTaGAACTGCCGGTCAAACATCTCCACCACCTGGCCAGACAGCACA +
Preference number: 5 (lower is better)
Translates to: GMPLRLTLCDMRYSS*NCRSNISTTWPDST
Trigger: TGTGCTGTCTGGCCAGGTGGTGGAGATGTTTGACCGGCAGTTCCAGGAGCTGTACCTCATGTCACACAGTGTGAGCCTCAAGGGCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS-3UTR CAA 90 bp GTACTGGTGCACCGACCAGGTGAGTGCCAACGTCTCCCGCCCATCCCACCTTCCATGTGCAGGAAGTACTaGACGTTACTCTCATCCACG +
Preference number: 5 (lower is better)
Translates to: VLVHRPGECQRLPPIPPSMCRKY*TLLSST
Trigger: CGTGGATGAGAGTAACGTCAAGTACTTCCTGCACAT...GGAAGGTGGGATGGGCGGGAGACGTTGGCACTCACCTGGTCGGTGCACCAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp TGCAGGATTCATGCCGTTGGGGTTCTGGGTAGCATCGCTGGGAGTGGGTGGGTTATCTCGTCGACGCTCTaGGCCTTGACAAGTGCGTAC +
Preference number: 5 (lower is better)
Translates to: CRIHAVGVLGSIAGSGWVISSTL*ALTSAY
Trigger: GTACGCACTTGTCAAGGCCAAGAGCGTCGACGAGAT...AACCCACCCACTCCCAGCGATGCTACCCAGAACCCCAACGGCATGAATCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCTGGGGGTTCCAGATGTaGGGGTCGATGATATTGATG +
Preference number: 5 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCWGFQM*GSMILM
Trigger: CATCAATATCATCGACCCCAACATCTGGAACCCCCA...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS-3UTR CAA 90 bp AGCAGGCTGCCTCTTCCATGTCCCACTTGGAAAAGGCTAGGGAGTAGGGCCTGGATGGTCTATATGGTCTaGGTGGAGGCCCCATCCCTC +
Preference number: 5 (lower is better)
Translates to: SRLPLPCPTWKRLGSRAWMVYMV*VEAPSL
Trigger: GAGGGATGGGGCCTCCACCAAGACCATATAGACCAT...CCAGGCCCTACTCCCTAGCCTTTTCCAAGTGGGACATGGAAGAGGCAGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp ACACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCGAGAGCTGGGAGAGATaGGCGATACTAGTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: TPPATCHVQTPCTCFETPESWER*AILVWN
Trigger: GTTCCAGACTAGTATCGCCAATCTCTCCCAGCTCTC...GGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp GCCAACGTCTCCCGCCCATCCCACCTTCCTGCCGTCCCAGTGGGCTCTGGTAGGAAGGCATTGGCCACTTaGGACTTTATTAGCAACAGT +
Preference number: 5 (lower is better)
Translates to: ANVSRPSHLPAVPVGSGRKALAT*DFISNS
Trigger: ACTGTTGCTAATAAAGTCCAAAGTGGCCAATGCCTT...CCTACCAGAGCCCACTGGGACGGCAGGAAGGTGGGATGGGCGGGAGACGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS GCA 90 bp ACAGTTGGCGCCAGTGTCTGCTCCTGGCACTATAAATGTGCCAGCTaGTGTCATGAGGGTCCAGGAGATGAGGGTAGGGGTGTATGTCCC +
Preference number: 5 (lower is better)
Translates to: TVGASVCSWHYKCAS*CHEGPGDEGRGVCP
Trigger: GGGACATACACCCCTACCCTCATCTCCTGGACCCTCATGACAGCAGCTGGCACATTTATAGTGCCAGGAGCAGACACTGGCGCCAACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS-3UTR CAA 90 bp CCGTGGACCGGGATGACCTTTGGCCTGACCATCATGGCCACCTGGTACTGGTGCATGTGCAGGAAGTACTaGACGTTACTCTCATCCACG +
Preference number: 5 (lower is better)
Translates to: PWTGMTFGLTIMATWYWCMCRKY*TLLSST
Trigger: CGTGGATGAGAGTAACGTCAAGTACTTCCTGCACAT...GCACCAGTACCAGGTGGCCATGATGGTCAGGCCAAAGGTCATCCCGGTCCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS TCA 90 bp AGATGTGCTCCAGCCCTGCGCACACCTCAGCAGCCTTGGGACCAATaGACCGGAATAACCAGGGTTAGGATTAAGGGCAGAAGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: RCAPALRTPQQPWDQ*TGITRVRIKGRSQL
Trigger: CAACTGGCTTCTGCCCTTAATCCTAACCCTGGTTATTCCGGTTCATTGGTCCCAAGGCTGCTGAGGTGTGCGCAGGGCTGGAGCACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 90 bp CCCCGCCTTTTCCTCATCTGCAAACTAGGGACTGTGCCACCCATCTaGCAGGTGCCATCAAGATCCTCTAACCACAGGCTTTGGAGACCT +
Preference number: 5 (lower is better)
Translates to: PRLFLICKLGTVPPI*QVPSRSSNHRLWRP
Trigger: AGGTCTCCAAAGCCTGTGGTTAGAGGATCTTGATGGCACCTGCCAGATGGGTGGCACAGTCCCTAGTTTGCAGATGAGGAAAAGGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS TCA 90 bp GCTGAAGTGAGCTCTCCTGGTGGGACCCTGACAGTATTGGGGCTTTaGGTGTGGCTGTTTTGGGCAGGTCAGAGGCTAATGGGACATCAT +
Preference number: 5 (lower is better)
Translates to: AEVSSPGGTLTVLGL*VWLFWAGQRLMGHH
Trigger: ATGATGTCCCATTAGCCTCTGACCTGCCCAAAACAGCCACACTCAAAGCCCCAATACTGTCAGGGTCCCACCAGGAGAGCTCACTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS GCA 90 bp TGCATACTGTGGGGTCAGACTGAGTCGGATGTCAAGCAAGTTGGTTaGACCAAGCCCATTCCCACCTCTGCAAATGACAGGGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: CILWGQTESDVKQVG*TKPIPTSANDRALC
Trigger: GCACAGTGCCCTGTCATTTGCAGAGGTGGGAATGGGCTTGGTGCAACCAACTTGCTTGACATCCGACTCAGTCTGACCCCACAGTATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 90 bp AACTCTGCCAGCCATGCAAACACAGTTGGCGCCAGTGTCTGCTCCTaGCACTATAAATGTGCCAGCTGCTGTCATGAGGGTCCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: NSASHANTVGASVCS*HYKCASCCHEGPGD
Trigger: ATCTCCTGGACCCTCATGACAGCAGCTGGCACATTTATAGTGCCAGGAGCAGACACTGGCGCCAACTGTGTTTGCATGGCTGGCAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS-3UTR CAA 90 bp AATGGCACTTGTTCATTTGCTCTGAGCCTCACACAAACCCTCGGTCTGAATACATGGGCCAGGGCACCCTaGAACTTGGTTGCCGACCGC +
Preference number: 5 (lower is better)
Translates to: NGTCSFALSLTQTLGLNTWARAP*NLVADR
Trigger: GCGGTCGGCAACCAAGTTCAAGGGTGCCCTGGCCCA...TGTATTCAGACCGAGGGTTTGTGTGAGGCTCAGAGCAAATGAACAAGTGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp TTGGACTGGAGAGGAAAAAGCCCCGGCTTGAGCCCGCCAGATGGTCTATATGGTTTCTCAGAGGAGATCTaGGCAATCTCGTCGACGCTC +
Preference number: 5 (lower is better)
Translates to: LDWRGKSPGLSPPDGLYGFSEEI*AISSTL
Trigger: GAGCGTCGACGAGATTGCCAAGATCTCCTCTGAGAA...ACCATATAGACCATCTGGCGGGCTCAAGCCGGGGCTTTTTCCTCTCCAGTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS CCA 90 bp CCACCCATCTGGCAGGTGCCATCAAGATCCTCTAACCACAGGCTTTaGAGACCTCTAGGTGGGGAAACGTGCATTTTCTTAGGTTGCCTT +
Preference number: 5 (lower is better)
Translates to: PPIWQVPSRSSNHRL*RPLGGETCIFLGCL
Trigger: AAGGCAACCTAAGAAAATGCACGTTTCCCCACCTAGAGGTCTCCAAAGCCTGTGGTTAGAGGATCTTGATGGCACCTGCCAGATGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS-3UTR CAA 90 bp ACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGCAGCTCCTCCAATaGTTTAAAAGCATGTACAAA +
Preference number: 5 (lower is better)
Translates to: TCHLPRTDAMHMFRDPHTGQLLQ*FKSMYK
Trigger: TTTGTACATGCTTTTAAACAATTGGAGGAGCTGCCC...TGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS CCA 90 bp GTGGTCCTCAGGGCCACAATCAAAGGGATTAACATGGATGTGGCTTaGCACAAGGTCTGGACAGGTATCACTTACTGCTGTGTGACCTCA +
Preference number: 5 (lower is better)
Translates to: VVLRATIKGINMDVA*HKVWTGITYCCVTS
Trigger: TGAGGTCACACAGCAGTAAGTGATACCTGTCCAGACCTTGTGCCAAGCCACATCCATGTTAATCCCTTTGATTGTGGCCCTGAGGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS-3UTR CAA 90 bp ACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAATTACTTTTGCTTCCTaGAATCGACAATCGGAAACC +
Preference number: 5 (lower is better)
Translates to: TCHLPRTDAMHMFRDPHTITFAS*NRQSET
Trigger: GGTTTCCGATTGTCGATTCAAGGAAGCAAAAGTAAT...TGTGTGGGGGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS-3UTR CAA 90 bp ATGAACACTTTAGAAGCCTCAGGAAGGTCCTCAAATGTCAAGAAAAATTACTTTAGTGCGTACTTGGGGTaGACGAGCTTCTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: MNTLEASGRSSNVKKNYFSAYLG*TSFLAT
Trigger: TGTGGCCAAGAAGCTCGTCAACCCCAAGTACGCACT...AAAGTAATTTTTCTTGACATTTGAGGACCTTCCTGAGGCTTCTAAAGTGTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388995.11
CDS CCA 72 bp CCATGGCGCCGCCTGCCCGGGCACTGCTGCCGGGGGTaGGTGGGCAAGGTCCAGCTCCTAGCTCCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: PWRRLPGHCCRG*VGKVQLLAPAQ
Trigger: CTGGGCCGGAGCTAGGAGCTGGACCTTGCCCACCCACCCCCGGCAGCAGTGCCCGGGCAGGCGGCGCCATGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 72 bp GCCAGTACTCCAGGGAGGGCAGCGGCTCGGCCTCGATaGGGACCCCATCCGCCCCGCTGGCTTCCTCGCCGT +
Preference number: 6 (lower is better)
Translates to: ASTPGRAAARPR*GPHPPRWLPRR
Trigger: ACGGCGAGGAAGCCAGCGGGGCGGATGGGGTCCCCATCGAGGCCGAGCCGCTGCCCTCCCTGGAGTACTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS GCA 72 bp CAGACACTGCACCTGAGAGAAGGCCATGGCGCCGCCTaGCCGGGCACTGCTGCCGGGGGTGGGTGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: QTLHLREGHGAA*PGTAAGGGWAR
Trigger: CCTTGCCCACCCACCCCCGGCAGCAGTGCCCGGGCAGGCGGCGCCATGGCCTTCTCTCAGGTGCAGTGTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CAA 72 bp GCACTCAGCTGCCGGCGCGGTGGTGGGGTTGGCCCGTaGGCCACTTGCTCTGAGTGGCGCCTCCGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: ALSCRRGGGVGP*ATCSEWRLRRG
Trigger: CCCTCTCCGGAGGCGCCACTCAGAGCAAGTGGCCAACGGGCCAACCCCACCACCGCGCCGGCAGCTGAGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
ENST00000580115.1
CDS GCA 72 bp TGCCGGCGCGGTGGTGGGGTTGGCCCGTTGGCCACTTaGTCTGAGTGGCGCCTCCGGAGAGGGACTGAGTGC +
Preference number: 6 (lower is better)
Translates to: CRRGGGVGPLAT*SEWRLRRGTEC
Trigger: GCACTCAGTCCCTCTCCGGAGGCGCCACTCAGAGCAAGTGGCCAACGGGCCAACCCCACCACCGCGCCGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
ENST00000580115.1
CDS CCA 72 bp GGTTGTCGTCCAGACACTGCACCTGAGAGAAGGCCATaGCGCCGCCTGCCCGGGCACTGCTGCCGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: GCRPDTAPERRP*RRLPGHCCRGW
Trigger: CCACCCCCGGCAGCAGTGCCCGGGCAGGCGGCGCCATGGCCTTCTCTCAGGTGCAGTGTCTGGACGACAACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 72 bp CACTCAGCTGCCGGCGCGGTGGTGGGGTTGGCCCGTTaGCCACTTGCTCTGAGTGGCGCCTCCGGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: HSAAGAVVGLAR*PLALSGASGEG
Trigger: TCCCTCTCCGGAGGCGCCACTCAGAGCAAGTGGCCAACGGGCCAACCCCACCACCGCGCCGGCAGCTGAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
ENST00000580115.1
CDS CCA 72 bp GCTTCCTCCGCCCAGCCCCCGTGCACCCATAGCCGCTaGGCCTCAGACTGTGGCCACAGGGCCCTGGGATCA +
Preference number: 6 (lower is better)
Translates to: ASSAQPPCTHSR*ASDCGHRALGS
Trigger: TGATCCCAGGGCCCTGTGGCCACAGTCTGAGGCCCAGCGGCTATGGGTGCACGGGGGCTGGGCGGAGGAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CAA 90 bp CGGATGCTCCTCGGTGGCCCTGCCATCGGTCATGGGGCGGGCATTTaGGGCCAGTCTTGGGCTGCCGGGATCCGGAAGCAGGCGGGGTAC +
Preference number: 6 (lower is better)
Translates to: RMLLGGPAIGHGAGI*GQSWAAGIRKQAGY
Trigger: GTACCCCGCCTGCTTCCGGATCCCGGCAGCCCAAGACTGGCCCAAAATGCCCGCCCCATGACCGATGGCAGGGCCACCGAGGAGCATCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 72 bp CGATGGTGTCGGGCCAGCCCAGGTCCAGCTGCGGGATaGAGCGGTCCGACTTCTGGGGCCAGTACTCCAGGG +
Preference number: 6 (lower is better)
Translates to: RWCRASPGPAAG*SGPTSGASTPG
Trigger: CCCTGGAGTACTGGCCCCAGAAGTCGGACCGCTCCATCCCGCAGCTGGACCTGGGCTGGCCCGACACCATCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp CTCTCGGGGTCATCCTGGGTCACAGATAGCTGCCGCTaGAGTGGGGCGTGGCCTGGGCCTGCCATCCTGGGT +
Preference number: 6 (lower is better)
Translates to: LSGSSWVTDSCR*SGAWPGPAILG
Trigger: ACCCAGGATGGCAGGCCCAGGCCACGCCCCACTCCAGCGGCAGCTATCTGTGACCCAGGATGACCCCGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp TCGGTGGCCCTGCCATCGGTCATGGGGCGGGCATTTTaGGCCAGTCTTGGGCTGCCGGGATCCGGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: SVALPSVMGRAF*ASLGLPGSGSR
Trigger: CCTGCTTCCGGATCCCGGCAGCCCAAGACTGGCCCAAAATGCCCGCCCCATGACCGATGGCAGGGCCACCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 72 bp GACTCGGATGCTCCTCGGTGGCCCTGCCATCGGTCATaGGGCGGGCATTTTGGGCCAGTCTTGGGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: DSDAPRWPCHRS*GGHFGPVLGCR
Trigger: CCGGCAGCCCAAGACTGGCCCAAAATGCCCGCCCCATGACCGATGGCAGGGCCACCGAGGAGCATCCGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CAA 72 bp CTCGGTGGCCCTGCCATCGGTCATGGGGCGGGCATTTaGGGCCAGTCTTGGGCTGCCGGGATCCGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: LGGPAIGHGAGI*GQSWAAGIRKQ
Trigger: CTGCTTCCGGATCCCGGCAGCCCAAGACTGGCCCAAAATGCCCGCCCCATGACCGATGGCAGGGCCACCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS TCA 72 bp CCAGCTCCGAGAGGAAGTCTCGGATGTTCTCCCGCTTaGGCACCTCGTAGAAGGCGTCCCGGCCGCGGGCCA +
Preference number: 6 (lower is better)
Translates to: PAPRGSLGCSPA*APRRRRPGRGP
Trigger: TGGCCCGCGGCCGGGACGCCTTCTACGAGGTGCTCAAGCGGGAGAACATCCGAGACTTCCTCTCGGAGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 72 bp GGTGGTGGGGTTGGCCCGTTGGCCACTTGCTCTGAGTaGCGCCTCCGGAGAGGGACTGAGTGCTCTCTCACC +
Preference number: 6 (lower is better)
Translates to: GGGVGPLATCSE*RLRRGTECSLT
Trigger: GGTGAGAGAGCACTCAGTCCCTCTCCGGAGGCGCCACTCAGAGCAAGTGGCCAACGGGCCAACCCCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
ENST00000580115.1
CDS CCA 72 bp TCCCTTGGCCTGCCAGTGGTGGGGGCCAGCCATGGCTaGGCCAGCGTTTCTGGTAGAGCTCTGGACGCTGTC +
Preference number: 6 (lower is better)
Translates to: SLGLPVVGASHG*ASVSGRALDAV
Trigger: GACAGCGTCCAGAGCTCTACCAGAAACGCTGGCCCAGCCATGGCTGGCCCCCACCACTGGCAGGCCAAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS TCA 72 bp CGCCAGTTCACATGGTTGTCGTCCAGACACTGCACCTaGGAGAAGGCCATGGCGCCGCCTGCCCGGGCACTG +
Preference number: 6 (lower is better)
Translates to: RQFTWLSSRHCT*EKAMAPPARAL
Trigger: CAGTGCCCGGGCAGGCGGCGCCATGGCCTTCTCTCAGGTGCAGTGTCTGGACGACAACCATGTGAACTGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS GCA 72 bp GGATTCCGAAGGGACTCGGATGCTCCTCGGTGGCCCTaGCATCGGTCATGGGGCGGGCATTTTGGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: GFRRDSDAPRWP*HRSWGGHFGPV
Trigger: GACTGGCCCAAAATGCCCGCCCCATGACCGATGGCAGGGCCACCGAGGAGCATCCGAGTCCCTTCGGAATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS GCA 72 bp CCAGAGACAGACAGGCGGGCAGATGTGCTCCAGCCCTaGGCACACCTCAGCAGCCTTGGGACCAATGAACCG +
Preference number: 6 (lower is better)
Translates to: PETDRRADVLQP*AHLSSLGTNEP
Trigger: CGGTTCATTGGTCCCAAGGCTGCTGAGGTGTGCGCAGGGCTGGAGCACATCTGCCCGCCTGTCTGTCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS GCA 72 bp CTGCATGTGGTGGCCGCTGCTGCCATGCGTCTATGCTaGCACCAACCCCCATGTAACCATGGGCAGCGCCCA +
Preference number: 6 (lower is better)
Translates to: LHVVAAAAMRLC*HQPPCNHGQRP
Trigger: TGGGCGCTGCCCATGGTTACATGGGGGTTGGTGGCAGCATAGACGCATGGCAGCAGCGGCCACCACATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 72 bp TGTTGGCCCTCTCCAGGTGAAGCAGTCCTGGGTGGATaGGTGGCAGCAGCTCGGGGAGTTCCCCTGGATGCT +
Preference number: 6 (lower is better)
Translates to: CWPSPGEAVLGG*VAAARGVPLDA
Trigger: AGCATCCAGGGGAACTCCCCGAGCTGCTGCCACCCATCCACCCAGGACTGCTTCACCTGGAGAGGGCCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp TGTCGCTGCCAGGCTCCGGGTCTGGCTCCACCCACGTaGGCAGGTACTCAAACATGTTGGCCCTCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: CRCQAPGLAPPT*AGTQTCWPSPG
Trigger: ACCTGGAGAGGGCCAACATGTTTGAGTACCTGCCCACGTGGGTGGAGCCAGACCCGGAGCCTGGCAGCGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp TCTCTTCCCCGACTCTGGGCCCATGGGGAGCCACCCTaGGGTCCAACAAAGGTCCCTCGGGTTATATGGGGG +
Preference number: 6 (lower is better)
Translates to: SLPRLWAHGEPP*GPTKVPRVIWG
Trigger: CCCCCATATAACCCGAGGGACCTTTGTTGGACCCCAGGGTGGCTCCCCATGGGCCCAGAGTCGGGGAAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
ENST00000580115.1
CDS CCA 72 bp CCAGCCATGGCTGGGCCAGCGTTTCTGGTAGAGCTCTaGACGCTGTCAGCAGCAGAGCGGTACCTAGGGGGT +
Preference number: 6 (lower is better)
Translates to: PAMAGPAFLVEL*TLSAAERYLGG
Trigger: ACCCCCTAGGTACCGCTCTGCTGCTGACAGCGTCCAGAGCTCTACCAGAAACGCTGGCCCAGCCATGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CAA 90 bp GCAATCTCGTCGACGCTCTTGGCCTTGACAAGTGCGTACTTGGGGTaGACGAGCTTCTTGGCCACAGTGCCCGCGGGCACCAGGGGGACC +
Preference number: 6 (lower is better)
Translates to: AISSTLLALTSAYLG*TSFLATVPAGTRGT
Trigger: GGTCCCCCTGGTGCCCGCGGGCACTGTGGCCAAGAAGCTCGTCAACCCCAAGTACGCACTTGTCAAGGCCAAGAGCGTCGACGAGATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS GCA 72 bp GTTCTGCATGTGGTGGCCGCTGCTGCCATGCGTCTATaGTGCCACCAACCCCCATGTAACCATGGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: VLHVVAAAAMRL*CHQPPCNHGQR
Trigger: GCGCTGCCCATGGTTACATGGGGGTTGGTGGCAGCATAGACGCATGGCAGCAGCGGCCACCACATGCAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 72 bp CTCAAACATGTTGGCCCTCTCCAGGTGAAGCAGTCCTaGGTGGATGGGTGGCAGCAGCTCGGGGAGTTCCCC +
Preference number: 6 (lower is better)
Translates to: LKHVGPLQVKQS*VDGWQQLGEFP
Trigger: GGGGAACTCCCCGAGCTGCTGCCACCCATCCACCCAGGACTGCTTCACCTGGAGAGGGCCAACATGTTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp AGTATGGGATTCCGAAGGGACTCGGATGCTCCTCGGTaGCCCTGCCATCGGTCATGGGGCGGGCATTTTGGG +
Preference number: 6 (lower is better)
Translates to: SMGFRRDSDAPR*PCHRSWGGHFG
Trigger: CCCAAAATGCCCGCCCCATGACCGATGGCAGGGCCACCGAGGAGCATCCGAGTCCCTTCGGAATCCCATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CAA 90 bp TCCTCAGAGCCCGGGTCGTACACCTCGATGGTCTCCAGGATGCGCTaGAGCTCCAGCTCCGAGAGGAAGTCTCGGATGTTCTCCCGCTTG +
Preference number: 6 (lower is better)
Translates to: SSEPGSYTSMVSRMR*SSSSERKSRMFSRL
Trigger: CAAGCGGGAGAACATCCGAGACTTCCTCTCGGAGCTGGAGCTCAAGCGCATCCTGGAGACCATCGAGGTGTACGACCCGGGCTCTGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS GCA 72 bp TGTGGAGCGCTGGGCCTGCATCCTCTTCAACGCATCTaGTTCTTCTCTTCCCCGACTCTGGGCCCATGGGGA +
Preference number: 6 (lower is better)
Translates to: CGALGLHPLQRI*FFSSPTLGPWG
Trigger: TCCCCATGGGCCCAGAGTCGGGGAAGAGAAGAAGCAGATGCGTTGAAGAGGATGCAGGCCCAGCGCTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
ENST00000580115.1
CDS CCA 72 bp CAGCCAGCGCTGGGCCTTTCAGCCCCAGGGGCTTCTTaGCCTCCTGCTTCTCAGAGGAGATCTTGGCAATCT +
Preference number: 6 (lower is better)
Translates to: QPALGLSAPGAS*PPASQRRSWQS
Trigger: AGATTGCCAAGATCTCCTCTGAGAAGCAGGAGGCCAAGAAGCCCCTGGGGCTGAAAGGCCCAGCGCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp CTGGCTCCACCCACGTGGGCAGGTACTCAAACATGTTaGCCCTCTCCAGGTGAAGCAGTCCTGGGTGGATGG +
Preference number: 6 (lower is better)
Translates to: LAPPTWAGTQTC*PSPGEAVLGGW
Trigger: CCATCCACCCAGGACTGCTTCACCTGGAGAGGGCCAACATGTTTGAGTACCTGCCCACGTGGGTGGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp GATGTAGCCCAGGATGTCGCTGCCAGGCTCCGGGTCTaGCTCCACCCACGTGGGCAGGTACTCAAACATGTT +
Preference number: 6 (lower is better)
Translates to: DVAQDVAARLRV*LHPRGQVLKHV
Trigger: AACATGTTTGAGTACCTGCCCACGTGGGTGGAGCCAGACCCGGAGCCTGGCAGCGACATCCTGGGCTACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp GCCTGGGAGGTGTCACGGATCTTGATGCGGTTCATCTaGCTGGGCTGGGGGTTCCAGATGTTGGGGTCGATG +
Preference number: 6 (lower is better)
Translates to: AWEVSRILMRFI*LGWGFQMLGSM
Trigger: CATCGACCCCAACATCTGGAACCCCCAGCCCAGCCAGATGAACCGCATCAAGATCCGTGACACCTCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp GATTCACTAAGCAGCTCAGGAAGGCCCTGGACACTGTaGGGGGTTCTGCATGTGGTGGCCGCTGCTGCCATG +
Preference number: 6 (lower is better)
Translates to: DSLSSSGRPWTL*GVLHVVAAAAM
Trigger: CATGGCAGCAGCGGCCACCACATGCAGAACCCCCCACAGTGTCCAGGGCCTTCCTGAGCTGCTTAGTGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 72 bp CCAAGGACCAATCCTGACACAAGTGTCCCTCAGGCTTaGACTCACCCCGTCTCGCACTCCACCCCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: PRTNPDTSVPQA*THPVSHSTPRS
Trigger: TGACCTGGGGGTGGAGTGCGAGACGGGGTGAGTCCAAGCCTGAGGGACACTTGTGTCAGGATTGGTCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CAA 72 bp CCCGGGTCGTACACCTCGATGGTCTCCAGGATGCGCTaGAGCTCCAGCTCCGAGAGGAAGTCTCGGATGTTC +
Preference number: 6 (lower is better)
Translates to: PGSYTSMVSRMR*SSSSERKSRMF
Trigger: GAACATCCGAGACTTCCTCTCGGAGCTGGAGCTCAAGCGCATCCTGGAGACCATCGAGGTGTACGACCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CAA 90 bp GCCCGGTCTCCATCCACAAACATGAACTTCTGGGCCAGGGCACCCTaGAACTTGGTTGCCGACCGCGTGAAGAACTCAGTTCCCCCGCTG +
Preference number: 6 (lower is better)
Translates to: ARSPSTNMNFWARAP*NLVADRVKNSVPPL
Trigger: CAGCGGGGGAACTGAGTTCTTCACGCGGTCGGCAACCAAGTTCAAGGGTGCCCTGGCCCAGAAGTTCATGTTTGTGGATGGAGACCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CAA 90 bp ATCTTGGCAATCTCGTCGACGCTCTTGGCCTTGACAAGTGCGTACTaGGGGTTGACGAGCTTCTTGGCCACAGTGCCCGCGGGCACCAGG +
Preference number: 6 (lower is better)
Translates to: ILAISSTLLALTSAY*GLTSFLATVPAGTR
Trigger: CCTGGTGCCCGCGGGCACTGTGGCCAAGAAGCTCGTCAACCCCAAGTACGCACTTGTCAAGGCCAAGAGCGTCGACGAGATTGCCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS TCA 72 bp AGGGGGTCCTGGGAAGCCGTCTTTATCCCTAGTCCCTaGGGCAGGGACCCTGTGATGATGAAACTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: RGSWEAVFIPSP*GRDPVMMKLLA
Trigger: GGCCAGCAGTTTCATCATCACAGGGTCCCTGCCTCAGGGACTAGGGATAAAGACGGCTTCCCAGGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS GCA 72 bp CCTCTTTGGGGAGCTCCAGGACCCAGCCAATATCACTaGTGTCCCGGGCTAGTACATCTGCCACAGGGACTG +
Preference number: 6 (lower is better)
Translates to: PLWGAPGPSQYH*CPGLVHLPQGL
Trigger: CAGTCCCTGTGGCAGATGTACTAGCCCGGGACAGCAGTGATATTGGCTGGGTCCTGGAGCTCCCCAAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp CCAGCCGCTGCTCCTCGCTGTAGAAGAACTCAGGCTTaGACTCGCTGGAGCGCCAGTTCACATGGTTGTCGT +
Preference number: 6 (lower is better)
Translates to: PAAAPRCRRTQA*TRWSASSHGCR
Trigger: ACGACAACCATGTGAACTGGCGCTCCAGCGAGTCCAAGCCTGAGTTCTTCTACAGCGAGGAGCAGCGGCTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CCA 72 bp CACACAGCCCGGTCTCCATCCACAAACATGAACTTCTaGGCCAGGGCACCCTTGAACTTGGTTGCCGACCGC +
Preference number: 6 (lower is better)
Translates to: HTARSPSTNMNF*ARAPLNLVADR
Trigger: GCGGTCGGCAACCAAGTTCAAGGGTGCCCTGGCCCAGAAGTTCATGTTTGTGGATGGAGACCGGGCTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp AGCCAGAGGTACCTCTCGCACAACTTCCCTGAAAGCTaGAGAGTCACCTGTAGGAGCCGCACACAGCCCGGT +
Preference number: 6 (lower is better)
Translates to: SQRYLSHNFPES*RVTCRSRTQPG
Trigger: ACCGGGCTGTGTGCGGCTCCTACAGGTGACTCTCCAGCTTTCAGGGAAGTTGTGCGAGAGGTACCTCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 72 bp AGGGTTCTGGGACCTTGTCCTGTGCCTCCTTGTCTGTaGAGCGCTGGGCCTGCATCCTCTTCAACGCATCTG +
Preference number: 6 (lower is better)
Translates to: RVLGPCPVPPCL*SAGPASSSTHL
Trigger: CAGATGCGTTGAAGAGGATGCAGGCCCAGCGCTCCACAGACAAGGAGGCACAGGACAAGGTCCCAGAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580115.1
CDS CAA 72 bp GGCTCCGGCTCCGGTTCCTTCTCCATAGGGATGCCCTaGAGGCTCACACTGTGTGACATGAGGTACAGCTCC +
Preference number: 6 (lower is better)
Translates to: GSGSGSFSIGMP*RLTLCDMRYSS
Trigger: GGAGCTGTACCTCATGTCACACAGTGTGAGCCTCAAGGGCATCCCTATGGAGAAGGAACCGGAGCCGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CAA 72 bp ATCTCGTCGACGCTCTTGGCCTTGACAAGTGCGTACTaGGGGTTGACGAGCTTCTTGGCCACAGTGCCCGCG +
Preference number: 6 (lower is better)
Translates to: ISSTLLALTSAY*GLTSFLATVPA
Trigger: CGCGGGCACTGTGGCCAAGAAGCTCGTCAACCCCAAGTACGCACTTGTCAAGGCCAAGAGCGTCGACGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CAA 90 bp ATCCTGGGTAGCCTATGGTCTGTCCCATTCTGGGGAGCTTCCTCTTaGGGGAGCTCCAGGACCCAGCCAATATCACTGCTGTCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: ILGSLWSVPFWGASS*GSSRTQPISLLSRA
Trigger: AGCCCGGGACAGCAGTGATATTGGCTGGGTCCTGGAGCTCCCCAAAGAGGAAGCTCCCCAGAATGGGACAGACCATAGGCTACCCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS TCA 72 bp AGGATCCACACCTCCCCTATTGACAGGTCAGGGGACTaGGTCCCTGGGAATGAGTGTACCTCGGCTCTCGCT +
Preference number: 6 (lower is better)
Translates to: RIHTSPIDRSGD*VPGNECTSALA
Trigger: AGCGAGAGCCGAGGTACACTCATTCCCAGGGACTCAGTCCCCTGACCTGTCAATAGGGGAGGTGTGGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS GCA 72 bp ACTTGCTCTGAGTGGCGCCTCCGGAGAGGGACTGAGTaGTCTCTCACCTCGAAGTACTCCTCTGACACAGAG +
Preference number: 6 (lower is better)
Translates to: TCSEWRLRRGTE*SLTSKYSSDTE
Trigger: CTCTGTGTCAGAGGAGTACTTCGAGGTGAGAGAGCACTCAGTCCCTCTCCGGAGGCGCCACTCAGAGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
ENST00000580115.1
CDS CCA 72 bp GATGATGAAACTGCTGGCCCTGTGCCTCCTTGTCTGTaGAGCGCTGGGCCTGCATCCTCTTCAACGCATCTG +
Preference number: 6 (lower is better)
Translates to: DDETAGPVPPCL*SAGPASSSTHL
Trigger: CAGATGCGTTGAAGAGGATGCAGGCCCAGCGCTCCACAGACAAGGAGGCACAGGGCCAGCAGTTTCATCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CAA 90 bp AGCACAATAGGCTCCGGCTCCGGTTCCTTCTCCATAGGGATGCCCTaGAGGCTCACACTGTGTGACATGAGGTACAGCTCCTGGAACTGC +
Preference number: 6 (lower is better)
Translates to: STIGSGSGSFSIGMP*RLTLCDMRYSSWNC
Trigger: GCAGTTCCAGGAGCTGTACCTCATGTCACACAGTGTGAGCCTCAAGGGCATCCCTATGGAGAAGGAACCGGAGCCGGAGCCTATTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CAA 90 bp GCCTCCTGCTTCTCAGAGGAGATCTTGGCAATCTCGTCGACGCTCTaGGCCTTGACAAGTGCGTACTTGGGGTTGACGAGCTTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: ASCFSEEILAISSTL*ALTSAYLGLTSFLA
Trigger: GGCCAAGAAGCTCGTCAACCCCAAGTACGCACTTGTCAAGGCCAAGAGCGTCGACGAGATTGCCAAGATCTCCTCTGAGAAGCAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CAA 90 bp TTCAGCCCCAGGGGCTTCTTGGCCTCCTGCTTCTCAGAGGAGATCTaGGCAATCTCGTCGACGCTCTTGGCCTTGACAAGTGCGTACTTG +
Preference number: 6 (lower is better)
Translates to: FSPRGFLASCFSEEI*AISSTLLALTSAYL
Trigger: CAAGTACGCACTTGTCAAGGCCAAGAGCGTCGACGAGATTGCCAAGATCTCCTCTGAGAAGCAGGAGGCCAAGAAGCCCCTGGGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CAA 90 bp TCCTGGTGGGACCCTGACAGTATTGGGGCTTTGAGTGTGGCTGTTTaGGGCAGGTCAGAGGCTAATGGGACATCATCGTGCCTCATGCCC +
Preference number: 6 (lower is better)
Translates to: SWWDPDSIGALSVAV*GRSEANGTSSCLMP
Trigger: GGGCATGAGGCACGATGATGTCCCATTAGCCTCTGACCTGCCCAAAACAGCCACACTCAAAGCCCCAATACTGTCAGGGTCCCACCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS TCA 72 bp CACGGCCGGAGCTGCCTGAGTGGCTGTCCTGGTCACTaGGGGTTACGTAGTCGTCATCATCTTCTTCTTCCA +
Preference number: 6 (lower is better)
Translates to: HGRSCLSGCPGH*GLRSRHHLLLP
Trigger: TGGAAGAAGAAGATGATGACGACTACGTAACCCTCAGTGACCAGGACAGCCACTCAGGCAGCTCCGGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS TCA 72 bp TGGCTACCGCCCGTCCTGGCCTTTAGGTGCTTCGACTaGGACAGTTTGGAGTATGGGATTCCGAAGGGACTC +
Preference number: 6 (lower is better)
Translates to: WLPPVLAFRCFD*DSLEYGIPKGL
Trigger: GAGTCCCTTCGGAATCCCATACTCCAAACTGTCTCAGTCGAAGCACCTAAAGGCCAGGACGGGCGGTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS TCA 72 bp CCAGCCCTGCGCACACCTCAGCAGCCTTGGGACCAATaGACCGGAATAACCAGGGTTAGGATTAAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: PALRTPQQPWDQ*TGITRVRIKGR
Trigger: TCTGCCCTTAATCCTAACCCTGGTTATTCCGGTTCATTGGTCCCAAGGCTGCTGAGGTGTGCGCAGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS GCA 72 bp GCCAGTGTCTGCTCCTGGCACTATAAATGTGCCAGCTaGTGTCATGAGGGTCCAGGAGATGAGGGTAGGGGT +
Preference number: 6 (lower is better)
Translates to: ASVCSWHYKCAS*CHEGPGDEGRG
Trigger: ACCCCTACCCTCATCTCCTGGACCCTCATGACAGCAGCTGGCACATTTATAGTGCCAGGAGCAGACACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 72 bp GCTCCTCGCTGTAGAAGAACTCAGGCTTGGACTCGCTaGAGCGCCAGTTCACATGGTTGTCGTCCAGACACT +
Preference number: 6 (lower is better)
Translates to: APRCRRTQAWTR*SASSHGCRPDT
Trigger: AGTGTCTGGACGACAACCATGTGAACTGGCGCTCCAGCGAGTCCAAGCCTGAGTTCTTCTACAGCGAGGAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS CAA 72 bp AGCCTATGGTCTGTCCCATTCTGGGGAGCTTCCTCTTaGGGGAGCTCCAGGACCCAGCCAATATCACTGCTG +
Preference number: 6 (lower is better)
Translates to: SLWSVPFWGASS*GSSRTQPISLL
Trigger: CAGCAGTGATATTGGCTGGGTCCTGGAGCTCCCCAAAGAGGAAGCTCCCCAGAATGGGACAGACCATAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CAA 90 bp GCAGGTGCATACTGTGGGGTCAGACTGAGTCGGATGTCAAGCAAGTaGGTTGCACCAAGCCCATTCCCACCTCTGCAAATGACAGGGCAC +
Preference number: 6 (lower is better)
Translates to: AGAYCGVRLSRMSSK*VAPSPFPPLQMTGH
Trigger: GTGCCCTGTCATTTGCAGAGGTGGGAATGGGCTTGGTGCAACCAACTTGCTTGACATCCGACTCAGTCTGACCCCACAGTATGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS GCA 72 bp CTTGGCAATCTCGTCGACGCTCTTGGCCTTGACAAGTaGGTACTTGGGGTTGACGAGCTTCTTGGCCACAGT +
Preference number: 6 (lower is better)
Translates to: LGNLVDALGLDK*VLGVDELLGHS
Trigger: ACTGTGGCCAAGAAGCTCGTCAACCCCAAGTACGCACTTGTCAAGGCCAAGAGCGTCGACGAGATTGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp TTGAGGCTCACACTGTGTGACATGAGGTACAGCTCCTaGAACTGCCGGTCAAACATCTCCACCACCTGGCCA +
Preference number: 6 (lower is better)
Translates to: LRLTLCDMRYSS*NCRSNISTTWP
Trigger: TGGCCAGGTGGTGGAGATGTTTGACCGGCAGTTCCAGGAGCTGTACCTCATGTCACACAGTGTGAGCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CCA 72 bp CCGTCCTGGCCTTTAGGTGCTTCGACTGAGACAGTTTaGAGTATGGGATTCCGAAGGGACTCGGATGCTCCT +
Preference number: 6 (lower is better)
Translates to: PSWPLGASTETV*SMGFRRDSDAP
Trigger: AGGAGCATCCGAGTCCCTTCGGAATCCCATACTCCAAACTGTCTCAGTCGAAGCACCTAAAGGCCAGGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345041.4
ENST00000388995.11
CDS GCA 72 bp TGGGGTCAGACTGAGTCGGATGTCAAGCAAGTTGGTTaGACCAAGCCCATTCCCACCTCTGCAAATGACAGG +
Preference number: 6 (lower is better)
Translates to: WGQTESDVKQVG*TKPIPTSANDR
Trigger: CCTGTCATTTGCAGAGGTGGGAATGGGCTTGGTGCAACCAACTTGCTTGACATCCGACTCAGTCTGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 72 bp GTGTCACGGATCTTGATGCGGTTCATCTGGCTGGGCTaGGGGTTCCAGATGTTGGGGTCGATGATATTGATG +
Preference number: 6 (lower is better)
Translates to: VSRILMRFIWLG*GFQMLGSMILM
Trigger: CATCAATATCATCGACCCCAACATCTGGAACCCCCAGCCCAGCCAGATGAACCGCATCAAGATCCGTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CAA 72 bp CCATCCACAAACATGAACTTCTGGGCCAGGGCACCCTaGAACTTGGTTGCCGACCGCGTGAAGAACTCAGTT +
Preference number: 6 (lower is better)
Translates to: PSTNMNFWARAP*NLVADRVKNSV
Trigger: AACTGAGTTCTTCACGCGGTCGGCAACCAAGTTCAAGGGTGCCCTGGCCCAGAAGTTCATGTTTGTGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CAA 72 bp GAGGAGATCTTGGCAATCTCGTCGACGCTCTTGGCCTaGACAAGTGCGTACTTGGGGTTGACGAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: EEILAISSTLLA*TSAYLGLTSFL
Trigger: CAAGAAGCTCGTCAACCCCAAGTACGCACTTGTCAAGGCCAAGAGCGTCGACGAGATTGCCAAGATCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CAA 72 bp TTCTCAGAGGAGATCTTGGCAATCTCGTCGACGCTCTaGGCCTTGACAAGTGCGTACTTGGGGTTGACGAGC +
Preference number: 6 (lower is better)
Translates to: FSEEILAISSTL*ALTSAYLGLTS
Trigger: GCTCGTCAACCCCAAGTACGCACTTGTCAAGGCCAAGAGCGTCGACGAGATTGCCAAGATCTCCTCTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345041.4
ENST00000388995.11
ENST00000399096.2
CDS CAA 72 bp GGAATAACCAGGGTTAGGATTAAGGGCAGAAGCCAGTaGGGAGCCAGAGGTACCTCTCGCACAACTTCCCTG +
Preference number: 6 (lower is better)
Translates to: GITRVRIKGRSQ*GARGTSRTTSL
Trigger: CAGGGAAGTTGTGCGAGAGGTACCTCTGGCTCCCAACTGGCTTCTGCCCTTAATCCTAACCCTGGTTATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CAA 72 bp GACCCTGACAGTATTGGGGCTTTGAGTGTGGCTGTTTaGGGCAGGTCAGAGGCTAATGGGACATCATCGTGC +
Preference number: 6 (lower is better)
Translates to: DPDSIGALSVAV*GRSEANGTSSC
Trigger: GCACGATGATGTCCCATTAGCCTCTGACCTGCCCAAAACAGCCACACTCAAAGCCCCAATACTGTCAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CAA 72 bp TACTGTGGGGTCAGACTGAGTCGGATGTCAAGCAAGTaGGTTGCACCAAGCCCATTCCCACCTCTGCAAATG +
Preference number: 6 (lower is better)
Translates to: YCGVRLSRMSSK*VAPSPFPPLQM
Trigger: CATTTGCAGAGGTGGGAATGGGCTTGGTGCAACCAACTTGCTTGACATCCGACTCAGTCTGACCCCACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 72 bp GAGTGGTCCTCAGGGCCACAATCAAAGGGATTAACATaGATGTGGCTTGGCACAAGGTCTGGACAGGTATCA +
Preference number: 6 (lower is better)
Translates to: EWSSGPQSKGLT*MWLGTRSGQVS
Trigger: TGATACCTGTCCAGACCTTGTGCCAAGCCACATCCATGTTAATCCCTTTGATTGTGGCCCTGAGGACCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 72 bp TGGCAGGTGCCATCAAGATCCTCTAACCACAGGCTTTaGAGACCTCTAGGTGGGGAAACGTGCATTTTCTTA +
Preference number: 6 (lower is better)
Translates to: WQVPSRSSNHRL*RPLGGETCIFL
Trigger: TAAGAAAATGCACGTTTCCCCACCTAGAGGTCTCCAAAGCCTGTGGTTAGAGGATCTTGATGGCACCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 72 bp AGGGCCACAATCAAAGGGATTAACATGGATGTGGCTTaGCACAAGGTCTGGACAGGTATCACTTACTGCTGT +
Preference number: 6 (lower is better)
Translates to: RATIKGINMDVA*HKVWTGITYCC
Trigger: ACAGCAGTAAGTGATACCTGTCCAGACCTTGTGCCAAGCCACATCCATGTTAATCCCTTTGATTGTGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS CCA 72 bp TCCTCAGGGCCACAATCAAAGGGATTAACATGGATGTaGCTTGGCACAAGGTCTGGACAGGTATCACTTACT +
Preference number: 6 (lower is better)
Translates to: SSGPQSKGLTWM*LGTRSGQVSLT
Trigger: AGTAAGTGATACCTGTCCAGACCTTGTGCCAAGCCACATCCATGTTAATCCCTTTGATTGTGGCCCTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399096.2
CDS TCA 72 bp CGTACTAAAAACCATGGGAACAGTGTACACTTTGGGTaGATTATATGGTCTGTGAATATCTCAATAAAGCTG +
Preference number: 6 (lower is better)
Translates to: RTKNHGNSVHFG*IIWSVNISIKL
Trigger: CAGCTTTATTGAGATATTCACAGACCATATAATTCACCCAAAGTGTACACTGTTCCCATGGTTTTTAGTACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399096.2