RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM83A (Homo sapiens)

Ensembl gene IDs: ENSG00000147689

Ensembl transcript IDs: ENST00000276699.10, ENST00000518448.5, ENST00000520541.5, ENST00000521468.1, ENST00000522648.5, ENST00000523412.1, ENST00000523819.5, ENST00000536633.2

Found 652 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACAGGCCGTCAGGGGTCAGAGGCCACCAGGAGGAAGAGCTCTGTaGTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAA +
Preference number: 1 (lower is better)
Translates to: PQAVRGQRPPGGRAL*SRPSTAKAELPRQK
Trigger: TTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTCCTGGTGGCCTCTGACCCCTGACGGCCTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR CCA 90 bp CCCTGCTGCTCAAGACTGGCCTGGGCACTGCAGTGGGGCCAGTCCTaGCCCCTGACAACTCAAGCTCCTAGGTCCAGTCTAGACTCCAGG +
Preference number: 1 (lower is better)
Translates to: PCCSRLAWALQWGQS*PLTTQAPRSSLDSR
Trigger: CCTGGAGTCTAGACTGGACCTAGGAGCTTGAGTTGTCAGGGGCCAGGACTGGCCCCACTGCAGTGCCCAGGCCAGTCTTGAGCAGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR GCA 90 bp GGAGGAGAGGGCCTAGAAACAGGAGAAGGATGTGGAGTTGGCACCTaGTCCCCTCTGGCTCCCCAGCCTGGATCACATACCACTGACCCC +
Preference number: 1 (lower is better)
Translates to: GGEGLETGEGCGVGT*SPLAPQPGSHTTDP
Trigger: GGGGTCAGTGGTATGTGATCCAGGCTGGGGAGCCAGAGGGGAGCAGGTGCCAACTCCACATCCTTCTCCTGTTTCTAGGCCCTCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR TCA 90 bp GGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTaGGGCCTTTGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCA +
Preference number: 1 (lower is better)
Translates to: GSPLSPRTELDTGTG*GLWKAGLGSFCDLA
Trigger: TGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCAAAGGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
3UTR TCA 90 bp ACCAGGAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTaGGCTTCCCCGCCAAAAACCGACAAGGGAGGAGAGGGCCTAGAA +
Preference number: 1 (lower is better)
Translates to: TRRKSSVLSSLHSEG*ASPPKTDKGGEGLE
Trigger: TTCTAGGCCCTCTCCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR GCA 90 bp GCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTaGACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGAT +
Preference number: 1 (lower is better)
Translates to: AGSASHVTGAQERRN*TFVNKDDHGGETAD
Trigger: ATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR GCA 90 bp CTAACCTGCCTTGTCCAACCCAACACCCCAAACTCCTCAGCTAGCTaGATCCCTGGTGGCTACAGCTTCAGATGGCTCCCCCATACAACT +
Preference number: 1 (lower is better)
Translates to: LTCLVQPNTPNSSAS*IPGGYSFRWLPHTT
Trigger: AGTTGTATGGGGGAGCCATCTGAAGCTGTAGCCACCAGGGATGCAGCTAGCTGAGGAGTTTGGGGTGTTGGGTTGGACAAGGCAGGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR CCA 90 bp ACCCCACTATCACACCTGAGGTGCAGGGTTAACTCTTACTTTATCTaGGAAGTGTCTCTGACATCCCACCCACCACAGGGCTGGCCAACC +
Preference number: 1 (lower is better)
Translates to: TPLSHLRCRVNSYFI*EVSLTSHPPQGWPT
Trigger: GGTTGGCCAGCCCTGTGGTGGGTGGGATGTCAGAGACACTTCCCAGATAAAGTAAGAGTTAACCCTGCACCTCAGGTGTGATAGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR GCA 90 bp CCCAGCCTGGATCACATACCACTGACCCCACTATCACACCTGAGGTaGAGGGTTAACTCTTACTTTATCTGGGAAGTGTCTCTGACATCC +
Preference number: 1 (lower is better)
Translates to: PSLDHIPLTPLSHLR*RVNSYFIWEVSLTS
Trigger: GGATGTCAGAGACACTTCCCAGATAAAGTAAGAGTTAACCCTGCACCTCAGGTGTGATAGTGGGGTCAGTGGTATGTGATCCAGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR CCA 90 bp AACAAAGGTTTATTTCTTGCTCACTACATATCCATTGTGGGTTGGTaGGGTGGGAGTGGGGGATTCTGCTCATCGCTTAGGACCCCAGGC +
Preference number: 1 (lower is better)
Translates to: NKGLFLAHYISIVGW*GGSGGFCSSLRTPG
Trigger: GCCTGGGGTCCTAAGCGATGAGCAGAATCCCCCACTCCCACCCCACCAACCCACAATGGATATGTAGTGAGCAAGAAATAAACCTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR TCA 90 bp CGGGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGGACACAGGCACAGGCTaGGGCCTTTGGAAAGCTGGG +
Preference number: 2 (lower is better)
Translates to: RGSPDLTSQQAAHHMLQVDTGTG*GLWKAG
Trigger: CCCAGCTTTCCAAAGGCCTCAGCCTGTGCCTGTGTC...CACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR TCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCCTATCTCCCAGGACTaGGCTCGACACAGGCACAGG +
Preference number: 2 (lower is better)
Translates to: GQPRPNLPAGSASHVTGAPISQD*ARHRHR
Trigger: CCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGG...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR TCA 90 bp AGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGGACACAGGCACAGGCTaGGGCCTTTGGAAAGCTGGG +
Preference number: 2 (lower is better)
Translates to: SPDLTSQQAAHHMLQVPRDTGTG*GLWKAG
Trigger: CCCAGCTTTCCAAAGGCCTCAGCCTGTGCCTGTGTC...CCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR CCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCGGCAAGTGGATGGCCTaGGGCCTGGGAACATTGAAC +
Preference number: 2 (lower is better)
Translates to: EEELCALVPPQRRLSFPAGKWMA*GLGTLN
Trigger: GTTCAATGTTCCCAGGCCCCAGGCCATCCACTTGCC...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR TCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCGCTTGGGAGCTTCTGTaGCCTGGCAAGCTTTGCCTT +
Preference number: 2 (lower is better)
Translates to: EEELCALVPPQRRLSFPAAWELL*PGKLCL
Trigger: AAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGC...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR TCA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGAACGCCACTCGTCGTTaGGGTGGGTCTTTGGGTCTC +
Preference number: 2 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGRNATRR*GGSLGL
Trigger: GAGACCCAAAGACCCACCTCAACGACGAGTGGCGTT...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR TCA 90 bp CCTAGGTCCAGTCTAGACTCCAGGGACCTCCAGGCCAGCCCAAGGCTCTTTGAACCTATCTCCCAGGACTaGGCTCGACACAGGCACAGG +
Preference number: 2 (lower is better)
Translates to: PRSSLDSRDLQASPRLFEPISQD*ARHRHR
Trigger: CCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGG...TTCAAAGAGCCTTGGGCTGGCCTGGAGGTCCCTGGAGTCTAGACTGGACCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR TCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCGGGGCCTGGGAACATTaGACCATGGCAGTGATTTTG +
Preference number: 2 (lower is better)
Translates to: EEELCALVPPQRRLSFPAGAWEH*TMAVIL
Trigger: CAAAATCACTGCCATGGTTCAATGTTCCCAGGCCCC...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR TCA 90 bp GGAGTGGGGGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCTCAGCCGTCAGCTGTaGAACAACAAGGTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GVGDSAHRLGPQAGRGGFLSRQL*NNKVRA
Trigger: AGCCCTGACCTTGTTGTTTCACAGCTGACGGCTGAG...AAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCCCCCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
3UTR-3UTR TCA 90 bp TGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGCCTATCTCCCAGGACTaGGCTCGACACAGGCACAGG +
Preference number: 2 (lower is better)
Translates to: CTFVNKDDHGGETADGGWPISQD*ARHRHR
Trigger: CCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGG...CCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR CCA 90 bp ACTCCTCAGCTAGCTGCATCCCTGGTGGCTACAGCTTCAGATGGCTCCCCCATAGAACCCAAGAACTGGTaGGGGCCGGCAAGTGGATGG +
Preference number: 2 (lower is better)
Translates to: TPQLAASLVATASDGSPIEPKNW*GPASGW
Trigger: CCATCCACTTGCCGGCCCCCACCAGTTCTTGGGTTC...TATGGGGGAGCCATCTGAAGCTGTAGCCACCAGGGATGCAGCTAGCTGAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR GCA 90 bp AGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAAAACTCCTCAGCTAGCTaGATCCCTGGTGGCTACAGC +
Preference number: 2 (lower is better)
Translates to: RALCSRPSTAKAELPRQKNSSAS*IPGGYS
Trigger: GCTGTAGCCACCAGGGATGCAGCTAGCTGAGGAGTT...TTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR GCA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGGCAATCTCAGCTCATTaGAACCTCTGCTTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGAISAH*NLCFLG
Trigger: ACCCAGGAAGCAGAGGTTGCAATGAGCTGAGATTGC...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR CCA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGGGCTACAGCTTCAGATaGCTCCCCCATACAACTCAT +
Preference number: 2 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGGYSFR*LPHTTH
Trigger: ATGAGTTGTATGGGGGAGCCATCTGAAGCTGTAGCC...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR TCA 90 bp CAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTGCTTGGGAGCTTCTGTaGCCTGGCAAGCTTTGCCTT +
Preference number: 2 (lower is better)
Translates to: QQAAHHMLQVPRRGETAPAWELL*PGKLCL
Trigger: AAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGC...AGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR GCA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGTTGGGCTGCATTTCCTaGTTCTTACGGAGTTTTGGG +
Preference number: 2 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGRLGCIS*FLRSFG
Trigger: CCCAAAACTCCGTAAGAAGCAGGAAATGCAGCCCAA...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR CAA 90 bp GCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTaGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGT +
Preference number: 2 (lower is better)
Translates to: AHHMLQVPRRGETAP*STKTTTEGRLLMEG
Trigger: ACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR TCA 90 bp CAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGGCTTGGGAGCTTCTGTaGCCTGGCAAGCTTTGCCTT +
Preference number: 2 (lower is better)
Translates to: QAAHHMLQVPRRGETAPLAWELL*PGKLCL
Trigger: AAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGC...CAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR TCA 90 bp AGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGACACAGGCACAGGCTaGGGCCTTTGGAAAGCTGGG +
Preference number: 2 (lower is better)
Translates to: RRNCTFVNKDDHGGETADDTGTG*GLWKAG
Trigger: CCCAGCTTTCCAAAGGCCTCAGCCTGTGCCTGTGTC...ATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR TCA 90 bp GCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACACCTATCTCCCAGGACTaGGCTCGACACAGGCACAGG +
Preference number: 2 (lower is better)
Translates to: AHHMLQVPRRGETAPLSTPISQD*ARHRHR
Trigger: CCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGG...TGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR GCA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGCATCCTATATTTCTTTaGACTCAGCTAGGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGHPIFL*TQLGCA
Trigger: GGCACAGCCTAGCTGAGTGCAAAGAAATATAGGATG...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR TCA 90 bp GATCACATACCACTGACCCCACTATCACACCTGAGGTGCAGGGTTAACTCTTACGACACAGGCACAGGCTaGGGCCTTTGGAAAGCTGGG +
Preference number: 2 (lower is better)
Translates to: DHIPLTPLSHLRCRVNSYDTGTG*GLWKAG
Trigger: CCCAGCTTTCCAAAGGCCTCAGCCTGTGCCTGTGTC...GTAAGAGTTAACCCTGCACCTCAGGTGTGATAGTGGGGTCAGTGGTATGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR GCA 90 bp GTCAGAGGCCACCAGGAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTATCACACCTGAGGTaGAGGGTTAACTCTTACTTT +
Preference number: 2 (lower is better)
Translates to: VRGHQEEELCALVPPQRRLSHLR*RVNSYF
Trigger: AAAGTAAGAGTTAACCCTGCACCTCAGGTGTGATAG...CCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTCCTGGTGGCCTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR CCA 90 bp ACTCCTCAGCTAGCTGCATCCCTGGTGGCTACAGCTTCAGATGGCTCCCCCATATCACCCCTAATTCATTaGGCCCAAGGATACCCTAGT +
Preference number: 2 (lower is better)
Translates to: TPQLAASLVATASDGSPISPLIH*AQGYPS
Trigger: ACTAGGGTATCCTTGGGCCCAATGAATTAGGGGTGA...TATGGGGGAGCCATCTGAAGCTGTAGCCACCAGGGATGCAGCTAGCTGAGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR TCA 90 bp GATCACATACCACTGACCCCACTATCACACCTGAGGTGCAGGGTTAACTCTTACCTCAGCCGTCAGCTGTaGAACAACAAGGTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: DHIPLTPLSHLRCRVNSYLSRQL*NNKVRA
Trigger: AGCCCTGACCTTGTTGTTTCACAGCTGACGGCTGAG...GTAAGAGTTAACCCTGCACCTCAGGTGTGATAGTGGGGTCAGTGGTATGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR GCA 90 bp GATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGCAGGAGAGGAGAAACTaGACCTTTGTCAACAAAGAC +
Preference number: 2 (lower is better)
Translates to: DSAHRLGPQAGRGGFQLEQERRN*TFVNKD
Trigger: GTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTG...CTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR GCA 90 bp AGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCATCTATCTCTCAGTaGCTCTGTTTACCCATTTGT +
Preference number: 2 (lower is better)
Translates to: RALCSRPSTAKAELPRQKPSISQ*LCLPIC
Trigger: ACAAATGGGTAAACAGAGGCACTGAGAGATAGATGG...TTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR GCA 90 bp CCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCTCAGTCTTTCCCTTCTGGAATGTGCTaGACAGGTCAAACTAGAGCG +
Preference number: 2 (lower is better)
Translates to: PQLSRNIQNVPTPSPQSFPSGMC*TGQTRA
Trigger: CGCTCTAGTTTGACCTGTGCAGCACATTCCAGAAGG...GAAAGACTGAGGAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR GCA 90 bp GGGCCCAAGGATACCCTAGTATTAGCCTTTCCTAAGAGGAGGAGTTTCCCCAACATTTTGTCCTCTAGCTaGCCCACAACCTCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: GPKDTLVLAFPKRRSFPNILSSS*PTTSLE
Trigger: TTCCAGGGAGGTTGTGGGGCAGCTAGAGGACAAAAT...GTTGGGGAAACTCCTCCTCTTAGGAAAGGCTAATACTAGGGTATCCTTGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR GCA 90 bp GATCACATACCACTGACCCCACTATCACACCTGAGGTGCAGGGTTAACTCTTACCTGGCCCCTCCTGTATaGTTTCTAAGCATCCTATAT +
Preference number: 2 (lower is better)
Translates to: DHIPLTPLSHLRCRVNSYLAPPV*FLSILY
Trigger: ATATAGGATGCTTAGAAAGCATACAGGAGGGGCCAG...GTAAGAGTTAACCCTGCACCTCAGGTGTGATAGTGGGGTCAGTGGTATGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR CAA 90 bp AGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTaGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCC +
Preference number: 2 (lower is better)
Translates to: SFAFLKLSQQMVKSN*ECSAGPSHSNLISA
Trigger: GGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
3UTR CCA 72 bp AGTGGCTCAACGCCACTCGTCGTTGAGGTGGGTCTTTaGGTCTCAGGGAGTGCCCAGCCCTGGGCCTGCGGA +
Preference number: 3 (lower is better)
Translates to: SGSTPLVVEVGL*VSGSAQPWACG
Trigger: TCCGCAGGCCCAGGGCTGGGCACTCCCTGAGACCCAAAGACCCACCTCAACGACGAGTGGCGTTGAGCCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR GCA 72 bp TCAAAGCTTCTGCCCAGAAGTGACCCTCGGCGGTTCTaGTCATGCTCCACTCGCCGGGGCAGCCCCGACCTA +
Preference number: 3 (lower is better)
Translates to: SKLLPRSDPRRF*SCSTRRGSPDL
Trigger: TAGGTCGGGGCTGCCCCGGCGAGTGGAGCATGAGCAGAACCGCCGAGGGTCACTTCTGGGCAGAAGCTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR CAA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGGAGAAGGATGTGGAGTaGGCACCTGCTCCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGEKDVE*APAPLW
Trigger: CCAGAGGGGAGCAGGTGCCAACTCCACATCCTTCTC...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR CCA 72 bp TCAAGACTGGCCTGGGCACTGCAGTGGGGCCAGTCCTaGCCCCTGACAACTCAAGCTCCTAGGTCCAGTCTA +
Preference number: 3 (lower is better)
Translates to: SRLAWALQWGQS*PLTTQAPRSSL
Trigger: TAGACTGGACCTAGGAGCTTGAGTTGTCAGGGGCCAGGACTGGCCCCACTGCAGTGCCCAGGCCAGTCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR TCA 72 bp AAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTaGGCTTCCCCGCCAAAAACCGACAAGGGAGGAGAG +
Preference number: 3 (lower is better)
Translates to: KSSVLSSLHSEG*ASPPKTDKGGE
Trigger: CTCTCCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR CAA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGATGGTGAAATCCAATTaGGAATGTTCAGCCGGGCCC +
Preference number: 3 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGRMVKSN*ECSAGP
Trigger: GGGCCCGGCTGAACATTCCAAATTGGATTTCACCAT...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR CAA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGCCAGCCCAAGGCTCTTaGAAGCAAGAATCTGAGTCT +
Preference number: 3 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGRPAQGS*KQESES
Trigger: AGACTCAGATTCTTGCTTCAAAGAGCCTTGGGCTGG...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR TCA 72 bp CTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTaGGGCCTTTGGAAAGCTGGGCTTGGGAGCTTCTGT +
Preference number: 3 (lower is better)
Translates to: LSPRTELDTGTG*GLWKAGLGSFC
Trigger: ACAGAAGCTCCCAAGCCCAGCTTTCCAAAGGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
3UTR TCA 72 bp CTTTTCAAAGGGAAGTGGCTCAACGCCACTCGTCGTTaGGGTGGGTCTTTGGGTCTCAGGGAGTGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: LFKGKWLNATRR*GGSLGLRECPA
Trigger: GGCTGGGCACTCCCTGAGACCCAAAGACCCACCTCAACGACGAGTGGCGTTGAGCCACTTCCCTTTGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR TCA 72 bp GGGGCTTGTGAGGTTCAGCATTTATTCCTCAGGAGGTaGCCAGGCTGGTCAGAGGCACCTGGATCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: GACEVQHLFLRR*PGWSEAPGSGD
Trigger: GTCCCCAGATCCAGGTGCCTCTGACCAGCCTGGTCACCTCCTGAGGAATAAATGCTGAACCTCACAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR GCA 72 bp CCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCTaGTTCTATGTGGCAACCTGGACCCAGGCTCTCAAA +
Preference number: 3 (lower is better)
Translates to: PQAGRGGFQLES*FYVATWTQALK
Trigger: TTTGAGAGCCTGGGTCCAGGTTGCCACATAGAAGCAGCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR GCA 72 bp CTTGTCCAACCCAACACCCCAAACTCCTCAGCTAGCTaGATCCCTGGTGGCTACAGCTTCAGATGGCTCCCC +
Preference number: 3 (lower is better)
Translates to: LVQPNTPNSSAS*IPGGYSFRWLP
Trigger: GGGGAGCCATCTGAAGCTGTAGCCACCAGGGATGCAGCTAGCTGAGGAGTTTGGGGTGTTGGGTTGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR CCA 72 bp ACCCAAGAACTGGTGGGGGCCGGCAAGTGGATGGCCTaGGGCCTGGGAACATTGAACCATGGCAGTGATTTT +
Preference number: 3 (lower is better)
Translates to: TQELVGAGKWMA*GLGTLNHGSDF
Trigger: AAAATCACTGCCATGGTTCAATGTTCCCAGGCCCCAGGCCATCCACTTGCCGGCCCCCACCAGTTCTTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR CAA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCGTGACCTGGCAAGCTTaGCCTTCCTTAAACTTTCTC +
Preference number: 3 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEAVTWQA*PSLNFL
Trigger: GAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCAC...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR CAA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGTCTTTCCTGAATTTCTaGGGAGTGGACCATTCCTGG +
Preference number: 3 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGRSFLNF*GVDHSW
Trigger: CCAGGAATGGTCCACTCCCAAGAAATTCAGGAAAGA...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR CAA 90 bp ATGTGCTGCACAGGTCAAACTAGAGCGGGGAACCCAAGAACTGGTGGGGGCCGGGTGACCTGGCAAGCTTaGCCTTCCTTAAACTTTCTC +
Preference number: 3 (lower is better)
Translates to: MCCTGQTRAGNPRTGGGRVTWQA*PSLNFL
Trigger: GAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCAC...CCGGCCCCCACCAGTTCTTGGGTTCCCCGCTCTAGTTTGACCTGTGCAGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR TCA 72 bp GCAGGGTTAACTCTTACTTTATCTGGGAAGTGTCTCTaGCATCCCACCCACCACAGGGCTGGCCAACCCTCC +
Preference number: 3 (lower is better)
Translates to: AGLTLTLSGKCL*HPTHHRAGQPS
Trigger: GGAGGGTTGGCCAGCCCTGTGGTGGGTGGGATGTCAGAGACACTTCCCAGATAAAGTAAGAGTTAACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR CAA 90 bp CCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTCAGATGGTGAAATCCAATTaGGAATGTTCAGCCGGGCCC +
Preference number: 3 (lower is better)
Translates to: PLSTKTTTEGRLLMEGGQMVKSN*ECSAGP
Trigger: GGGCCCGGCTGAACATTCCAAATTGGATTTCACCAT...CTGACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR CAA 90 bp TTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGATGGTGAAATCCAATTaGGAATGTTCAGCCGGGCCC +
Preference number: 3 (lower is better)
Translates to: FCSSLRTPGWQRRVSTGEMVKSN*ECSAGP
Trigger: GGGCCCGGCTGAACATTCCAAATTGGATTTCACCAT...CTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR GCA 72 bp GCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTaGACCTTTGTCAACAAAGACGACCACGGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: ASHVTGAQERRN*TFVNKDDHGGE
Trigger: CTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR CCA 72 bp GCCTTTGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTaGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGA +
Preference number: 3 (lower is better)
Translates to: AFGKLGLGASVT*QALPSLNFLSR
Trigger: TCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
3UTR-3UTR CAA 90 bp TTCCTAAGAGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACTGGGGCCTGGGAACATaGAACCATGGCAGTGATTTT +
Preference number: 3 (lower is better)
Translates to: FLRGGVSPTLPKHPECSHWGLGT*NHGSDF
Trigger: AAAATCACTGCCATGGTTCAATGTTCCCAGGCCCCA...GTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCTCTTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR CCA 72 bp TTATTTCTTGCTCACTACATATCCATTGTGGGTTGGTaGGGTGGGAGTGGGGGATTCTGCTCATCGCTTAGG +
Preference number: 3 (lower is better)
Translates to: LFLAHYISIVGW*GGSGGFCSSLR
Trigger: CCTAAGCGATGAGCAGAATCCCCCACTCCCACCCCACCAACCCACAATGGATATGTAGTGAGCAAGAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
3UTR CCA 72 bp AAAAGAAACCAGAAGCCAAGATGCCCCAGATCATGCTaGGAGCAGTGGAGAATTGGAACAGAGGGATGGATG +
Preference number: 3 (lower is better)
Translates to: KRNQKPRCPRSC*EQWRIGTEGWM
Trigger: CATCCATCCCTCTGTTCCAATTCTCCACTGCTCCCAGCATGATCTGGGGCATCTTGGCTTCTGGTTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR GCA 72 bp GATCACATACCACTGACCCCACTATCACACCTGAGGTaGAGGGTTAACTCTTACTTTATCTGGGAAGTGTCT +
Preference number: 3 (lower is better)
Translates to: DHIPLTPLSHLR*RVNSYFIWEVS
Trigger: AGACACTTCCCAGATAAAGTAAGAGTTAACCCTGCACCTCAGGTGTGATAGTGGGGTCAGTGGTATGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR-3UTR CAA 90 bp TTCCTAAGAGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACGCTTCTTACGGAGTTTaGGGGGCCATTAATATTAAA +
Preference number: 3 (lower is better)
Translates to: FLRGGVSPTLPKHPECSHASYGV*GAINIK
Trigger: TTTAATATTAATGGCCCCCAAAACTCCGTAAGAAGC...GTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCTCTTAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp TGCTCCACTCGCCGGGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACGGGGGCTCCCTGGCCTaGGCCTGGATGTACTGGGCC +
Preference number: 4 (lower is better)
Translates to: CSTRRGSPDLTSQQAAHHGGSLA*AWMYWA
Trigger: GGCCCAGTACATCCAGGCCCAGGCCAGGGAGCCCCC...GTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCCCGGCGAGTGGAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TGCTCCACTCGCCGGGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACCATGCCTCCCGTCCCTaGGTGGTGCTGGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CSTRRGSPDLTSQQAAHHHASRP*VVLGEA
Trigger: AGCCTCCCCCAGCACCACCCAGGGACGGGAGGCATG...GTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCCCGGCGAGTGGAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TGCTCCACTCGCCGGGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACCTTTCAGGAACGGGGTaGCTGCCTGCCGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: CSTRRGSPDLTSQQAAHHLSGTG*LPAERP
Trigger: CGGCCGCTCGGCAGGCAGCCACCCCGTTCCTGAAAG...GTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCCCGGCGAGTGGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR CCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCCTTCGGGTACCGGGGTaGCTGCCTGCCGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPALRVPG*LPAERP
Trigger: CGGCCGCTCGGCAGGCAGCCACCCCGGTACCCGAAG...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCGGGGGCTCCCTGGCCTaGGCCTGGATGTACTGGGCC +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPAGGSLA*AWMYWA
Trigger: GGCCCAGTACATCCAGGCCCAGGCCAGGGAGCCCCC...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCCCTCCCAGGGTGTCTaGGGGACACGGGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GQPRPNLPAGSASHVTGAPSQGV*GTRGLP
Trigger: AGGGAGCCCCCGTGTCCCCCAGACACCCTGGGAGGG...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCGTAGGGCCGGCTCGCTaGCCTCTGAGGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: GQPRPNLPAGSASHVTGAVGPAR*PLRPQG
Trigger: TCCCTGTGGCCTCAGAGGGCAGCGAGCCGGCCCTAC...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCTCTCTCAGGGCCACCTaGCCTGCCCTCGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEASLRAT*PALGPG
Trigger: TCCCGGCCCGAGGGCAGGGCAGGTGGCCCTGAGAGA...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCGTCCCTGGGTGGTGCTaGGGGAGGCTGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: GQPRPNLPAGSASHVTGAVPGWC*GRLARQ
Trigger: CTGACGTGCCAGCCTCCCCCAGCACCACCCAGGGAC...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCTTTCAGGAACGGGGTaGCTGCCTGCCGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GQPRPNLPAGSASHVTGALSGTG*LPAERP
Trigger: CGGCCGCTCGGCAGGCAGCCACCCCGTTCCTGAAAG...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR CCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCTCGGGCCGGGAGGGCTaGCTCAGACACCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GQPRPNLPAGSASHVTGASGREG*LRHLLG
Trigger: GCCAAGGAGGTGTCTGAGCCAGCCCTCCCGGCCCGA...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp GGAGTGGGGGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTGTTCGGGTACCGGGGTaGCTGCCTGCCGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GVGDSAHRLGPQAGRGGFVRVPG*LPAERP
Trigger: CGGCCGCTCGGCAGGCAGCCACCCCGGTACCCGAAC...AAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCCCCCACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522648.5
CDS-3UTR TCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCCGGCTCGCTGCCCTCTaGGGCCACAGGGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPARLAAL*GHREVG
Trigger: ACCTACTTCCCTGTGGCCTCAGAGGGCAGCGAGCCG...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCCAGTCCCTTAGGGCCTaGTTCCGCCCCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPAQSLRA*FRPSQG
Trigger: ACCCTGGGAGGGGCGGAAGCAGGCCCTAAGGGACTG...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCGTAGGGCCGGCTCGCTaGCCTCTGAGGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEAVGPAR*PLRPQG
Trigger: TCCCTGTGGCCTCAGAGGGCAGCGAGCCGGCCCTAC...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGGTCCCTGGGTGGTGCTaGGGGAGGCTGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: SPDLTSQQAAHHMLQVPRVPGWC*GRLARQ
Trigger: CTGACGTGCCAGCCTCCCCCAGCACCACCCAGGGAC...CCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GTCAGAGGCCACCAGGAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCATGCCTCCCGTCCCTaGGTGGTGCTGGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VRGHQEEELCALVPPQRRHASRP*VVLGEA
Trigger: AGCCTCCCCCAGCACCACCCAGGGACGGGAGGCATG...CCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTCCTGGTGGCCTCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GTCAGAGGCCACCAGGAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCCAAGAGGGCGTCCGTaGCCAGCCGGGCACTCTCGT +
Preference number: 4 (lower is better)
Translates to: VRGHQEEELCALVPPQRRPRGRP*PAGHSR
Trigger: ACGAGAGTGCCCGGCTGGCCACGGACGCCCTCTTGG...CCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTCCTGGTGGCCTCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCTCCCTGGCCTGGGCCTaGATGTACTGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPASLAWA*MYWAST
Trigger: GGTGGAGGCCCAGTACATCCAGGCCCAGGCCAGGGA...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCGCTTCTGCCCAGAAGTaGCCCTCGGCGGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GQPRPNLPAGSASHVTGAASAQK*PSAVLL
Trigger: GAGCAGAACCGCCGAGGGTCACTTCTGGGCAGAAGC...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCCTCCCAGGACCGGCGTaGAGGGCACCTCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPALPGPA*RAPPRS
Trigger: ACTTCTTGGAGGTGCCCTGCACGCCGGTCCTGGGAG...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp TCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCCCCTCCCAGGGTGTCTaGGGGACACGGGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SAHRLGPQAGRGGFQLESPSQGV*GTRGLP
Trigger: AGGGAGCCCCCGTGTCCCCCAGACACCCTGGGAGGG...GCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TGCTCCACTCGCCGGGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACCTTAGGACCCCAGGCTaGCAGAGGAGGGTTTCAACT +
Preference number: 4 (lower is better)
Translates to: CSTRRGSPDLTSQQAAHHLRTPG*QRRVST
Trigger: AGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAG...GTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCCCGGCGAGTGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp CTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCGTAGGGCCGGCTCGCTaGCCTCTGAGGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: LPAGSASHVTGAQERRNCVGPAR*PLRPQG
Trigger: TCCCTGTGGCCTCAGAGGGCAGCGAGCCGGCCCTAC...GCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp TCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCGCTGAGGCCCAGCTGTaGAGTAGGGCCGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: SAHRLGPQAGRGGFQLESAEAQL*SRAGSL
Trigger: CAGCGAGCCGGCCCTACTGCACAGCTGGGCCTCAGC...GCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCGAGAGGATGTTCCGGTaGACGTGTCCGCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GQPRPNLPAGSASHVTGAERMFR*TCPQSQ
Trigger: CTGGCTCTGCGGACACGTGCACCGGAACATCCTCTC...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTCCTCCCGTCCCTGGGTaGTGCTGGGGGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: APLSTKTTTEGRLLMEGGPPVPG*CWGRLA
Trigger: TGCCAGCCTCCCCCAGCACCACCCAGGGACGGGAGG...ACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp ACTCCTCAGCTAGCTGCATCCCTGGTGGCTACAGCTTCAGATGGCTCCCCCATACCTCCCGTCCCTGGGTaGTGCTGGGGGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TPQLAASLVATASDGSPIPPVPG*CWGRLA
Trigger: TGCCAGCCTCCCCCAGCACCACCCAGGGACGGGAGG...TATGGGGGAGCCATCTGAAGCTGTAGCCACCAGGGATGCAGCTAGCTGAGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp TGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGCCTCCCGTCCCTGGGTaGTGCTGGGGGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CTFVNKDDHGGETADGGWPPVPG*CWGRLA
Trigger: TGCCAGCCTCCCCCAGCACCACCCAGGGACGGGAGG...CCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGGGGGGCTCCCTGGCCTaGGCCTGGATGTACTGGGCC +
Preference number: 4 (lower is better)
Translates to: DSAHRLGPQAGRGGFQLEGGSLA*AWMYWA
Trigger: GGCCCAGTACATCCAGGCCCAGGCCAGGGAGCCCCC...CTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp CAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTCCCTCCCAGGGTGTCTaGGGGACACGGGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QQAAHHMLQVPRRGETAPPSQGV*GTRGLP
Trigger: AGGGAGCCCCCGTGTCCCCCAGACACCCTGGGAGGG...AGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp ATGTGCTGCACAGGTCAAACTAGAGCGGGGAACCCAAGAACTGGTGGGGGCCGGAGGACGTGCGGTCACTaGCGGAGCCACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MCCTGQTRAGNPRTGGGRRTCGH*RSHCCC
Trigger: GCAGCAGCAGTGGCTCCGCCAGTGACCGCACGTCCT...CCGGCCCCCACCAGTTCTTGGGTTCCCCGCTCTAGTTTGACCTGTGCAGCACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGTGCTCAAGACTGGCCTaGGCACTGCAGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGCSRLA*ALQWGQ
Trigger: CTGGCCCCACTGCAGTGCCCAGGCCAGTCTTGAGCA...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp TGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGGCCAGGGAGAGCTGTTaGCCAGGCGCGCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: CTFVNKDDHGGETADGGWARESC*PGAPPL
Trigger: GAGAGGAGGCGCGCCTGGTCAACAGCTCTCCCTGGC...CCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCAAAGTCAGCCCTGGCTaGCCGGACCCACTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEAKVSPG*PDPLAL
Trigger: AAGAGCCAGTGGGTCCGGCCAGCCAGGGCTGACTTT...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTCCAAGAGGGCGTCCGTaGCCAGCCGGGCACTCTCGT +
Preference number: 4 (lower is better)
Translates to: APLSTKTTTEGRLLMEGGPRGRP*PAGHSR
Trigger: ACGAGAGTGCCCGGCTGGCCACGGACGCCCTCTTGG...ACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCTGTCCCTGGCCTGGGCCTaGATGTACTGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: CSSLRTPGWQRRVSTGELSLAWA*MYWAST
Trigger: GGTGGAGGCCCAGTACATCCAGGCCCAGGCCAGGGA...CAGCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTGGGGGCTCCCTGGCCTaGGCCTGGATGTACTGGGCC +
Preference number: 4 (lower is better)
Translates to: SRQRITCYRCPGEEKLHLGGSLA*AWMYWA
Trigger: GGCCCAGTACATCCAGGCCCAGGCCAGGGAGCCCCC...AAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGATGACCAGGACCTaGCTAGTCCGGGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: GSPDLTSQQAAHHMLQVPRMTRT*LVRVMQ
Trigger: CTGCATCACCCGGACTAGCCAGGTCCTGGTCATCCT...GGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR CCA 90 bp TGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCTGAGGACGTGCGGTCACTaGCGGAGCCACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CSSLRTPGWQRRVSTGELRTCGH*RSHCCC
Trigger: GCAGCAGCAGTGGCTCCGCCAGTGACCGCACGTCCT...CAGCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGGAACCCAAGAACTGGTaGGGGCCGGCAAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGREPKNW*GPASGW
Trigger: CCATCCACTTGCCGGCCCCCACCAGTTCTTGGGTTC...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp ATGTGCTGCACAGGTCAAACTAGAGCGGGGAACCCAAGAACTGGTGGGGGCCGGCCTGCTGCTCAAGACTaGCCTGGGCACTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: MCCTGQTRAGNPRTGGGRPAAQD*PGHCSG
Trigger: CCCACTGCAGTGCCCAGGCCAGTCTTGAGCAGCAGG...CCGGCCCCCACCAGTTCTTGGGTTCCCCGCTCTAGTTTGACCTGTGCAGCACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp GGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCGGCACCTCCAAGAAGTaGTTTACCGCTGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GSPDLTSQQAAHHMLQVPGTSKK*FTAVLS
Trigger: GCTCAGGACAGCGGTAAATCACTTCTTGGAGGTGCC...GGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GCCTTTGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCCCTCGCCTTCCTGGCTaGGCACCCGCCAGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: AFGKLGLGASVTWQALPSPRLPG*APASRL
Trigger: AAGCCTACTGGCGGGTGCTCAGCCAGGAAGGCGAGG...GGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTCCTCGCCTTCCTGGCTaGGCACCCGCCAGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: APLSTKTTTEGRLLMEGGPRLPG*APASRL
Trigger: AAGCCTACTGGCGGGTGCTCAGCCAGGAAGGCGAGG...ACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGTCTGGGAAGTGTCTCTaGCATCCCACCCACCACAGG +
Preference number: 4 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGRSGKCL*HPTHHR
Trigger: CCTGTGGTGGGTGGGATGTCAGAGACACTTCCCAGA...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp GCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTCAGTCCCTTAGGGCCTaGTTCCGCCCCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: APLSTKTTTEGRLLMEGGQSLRA*FRPSQG
Trigger: ACCCTGGGAGGGGCGGAAGCAGGCCCTAAGGGACTG...ACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp CCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTCAGAGGGGTTGGAGGACGTaGGGTCACTGGCGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PLSTKTTTEGRLLMEGGQRGWRT*GHWRSH
Trigger: GTGGCTCCGCCAGTGACCGCACGTCCTCCAACCCCT...CTGACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp TGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGAGGGGTTGGAGGACGTaGGGTCACTGGCGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: CTFVNKDDHGGETADGGWRGWRT*GHWRSH
Trigger: GTGGCTCCGCCAGTGACCGCACGTCCTCCAACCCCT...CCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GTCAGAGGCCACCAGGAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGGTGAGCCGGCTTTCCTaGTGGGTTTCGCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: VRGHQEEELCALVPPQRRVSRLS*WVSQLS
Trigger: GGAGAGTTGCGAAACCCAGCAGGAAAGCCGGCTCAC...CCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTCCTGGTGGCCTCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp CCTAGGTCCAGTCTAGACTCCAGGGACCTCCAGGCCAGCCCAAGGCTCTTTGAACTGAGCCCTCCCTGCTaGTCAAGACTGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PRSSLDSRDLQASPRLFELSPPC*SRLAWA
Trigger: TGCCCAGGCCAGTCTTGAGCAGCAGGGAGGGCTCAG...TTCAAAGAGCCTTGGGCTGGCCTGGAGGTCCCTGGAGTCTAGACTGGACCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTGGTGCTGGGGGAGGCTaGCACGTCAGCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: APLSTKTTTEGRLLMEGGGAGGG*HVSSSR
Trigger: TCTGGAGGAGCTGACGTGCCAGCCTCCCCCAGCACC...ACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTCATGCCTCCCGTCCCTaGGTGGTGCTGGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SRQRITCYRCPGEEKLHLHASRP*VVLGEA
Trigger: AGCCTCCCCCAGCACCACCCAGGGACGGGAGGCATG...AAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp CAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTCCCTGGCCTGGGCCTaGATGTACTGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: QQAAHHMLQVPRRGETAPSLAWA*MYWAST
Trigger: GGTGGAGGCCCAGTACATCCAGGCCCAGGCCAGGGA...AGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAACCCTCCCAGGGTGTCTaGGGGACACGGGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: ECSAGPSHSNLISAVSCEPSQGV*GTRGLP
Trigger: AGGGAGCCCCCGTGTCCCCCAGACACCCTGGGAGGG...TTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCAACAGCTCCACCGCCTaGCCTGTGAACTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEANSSTA*PVNLER
Trigger: CCTCTCCAAGTTCACAGGCCAGGCGGTGGAGCTGTT...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCCTTAGGACCCCAGGCTaGCAGAGGAGGGTTTCAACT +
Preference number: 4 (lower is better)
Translates to: GSPDLTSQQAAHHMLQVPLRTPG*QRRVST
Trigger: AGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAG...GGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCGGCTTCTCCCATACTTaGCCATCGCTGAGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPAGFSHT*PSLSAH
Trigger: GTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCC...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GTCAGAGGCCACCAGGAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGAGCCGGCTTTCCTGCTaGGTTTCGCAACTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VRGHQEEELCALVPPQRRSRLSC*VSQLSL
Trigger: GAGGGAGAGTTGCGAAACCCAGCAGGAAAGCCGGCT...CCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTCCTGGTGGCCTCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGCTCAGCCGTCAGCTGTaGAACAACAAGGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGLSRQL*NNKVRA
Trigger: AGCCCTGACCTTGTTGTTTCACAGCTGACGGCTGAG...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGGCTTGGGAGCTTCTGTaGCCTGGCAAGCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGAWELL*PGKLCL
Trigger: AAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGC...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp TGCTCCACTCGCCGGGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACAATCCTGTAGAACAGTaGGCAAACACACCGTACATG +
Preference number: 4 (lower is better)
Translates to: CSTRRGSPDLTSQQAAHHNPVEQ*ANTPYM
Trigger: CATGTACGGTGTGTTTGCTCACTGTTCTACAGGATT...GTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCCCGGCGAGTGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR GCA 90 bp GATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGCTCCCAGGACCGGCGTaGAGGGCACCTCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: DSAHRLGPQAGRGGFQLELPGPA*RAPPRS
Trigger: ACTTCTTGGAGGTGCCCTGCACGCCGGTCCTGGGAG...CTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTCAGTCCCTTAGGGCCTaGTTCCGCCCCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SRQRITCYRCPGEEKLHLQSLRA*FRPSQG
Trigger: ACCCTGGGAGGGGCGGAAGCAGGCCCTAAGGGACTG...AAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp TGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCTGCCACAGGGAAGTAGGTaGCGGACTGTAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CSSLRTPGWQRRVSTGELPQGSR*RTVGSW
Trigger: CCAGCTCCCTACAGTCCGGCACCTACTTCCCTGTGG...CAGCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp CCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCTCAGTCTTTCAGAACGAGCCGAGGCTaGCGGCGGCCCACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PQLSRNIQNVPTPSPQSFRTSRG*RRPTSP
Trigger: TGGGCTCGTGGGCCGCCGGCAGCCTCGGCTCGTTCT...GAAAGACTGAGGAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp GGGGGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGTGCCCACCCCTCCCTaGCCTATGAAGGAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GGFCSSLRTPGWQRRVSTVPTPP*PMKELL
Trigger: AAGGAGCTCCTTCATAGGGCAGGGAGGGGTGGGCAC...AGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR GCA 90 bp AATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAAGGCACCAGGCCCAGCTaGTCCAGCTGCAGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: NVQPGPVILTSSQPSAVKGTRPS*SSCSRV
Trigger: CACGCGGCTGCAGCTGGAGCAGCTGGGCCTGGTGCC...TTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGCACTCAGCTAGGCTGTaGCCTCAGGACCTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGRHSARL*PQDLVP
Trigger: TGGAACTAGGTCCTGAGGGCACAGCCTAGCTGAGTG...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp CCTAGGTCCAGTCTAGACTCCAGGGACCTCCAGGCCAGCCCAAGGCTCTTTGAAGGAGGAAGAGCTCTGTaGTCTCGTCCCTCCACAGCG +
Preference number: 4 (lower is better)
Translates to: PRSSLDSRDLQASPRLFEGGRAL*SRPSTA
Trigger: CGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTCC...TTCAAAGAGCCTTGGGCTGGCCTGGAGGTCCCTGGAGTCTAGACTGGACCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp ATGTGCTGCACAGGTCAAACTAGAGCGGGGAACCCAAGAACTGGTGGGGGCCGGGCTGGCCGGACCCACTaGCTCTTGACATCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: MCCTGQTRAGNPRTGGGRAGRTH*LLTSSR
Trigger: TCTGGAAGATGTCAAGAGCCAGTGGGTCCGGCCAGC...CCGGCCCCCACCAGTTCTTGGGTTCCCCGCTCTAGTTTGACCTGTGCAGCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GGGGGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTAAAGTCAGCCCTGGCTaGCCGGACCCACTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: GGFCSSLRTPGWQRRVSTKVSPG*PDPLAL
Trigger: AAGAGCCAGTGGGTCCGGCCAGCCAGGGCTGACTTT...AGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp CAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTGGCCCATCACAGGCTTaGAGGAGGCGTAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QQAAHHMLQVPRRGETAPGPSQA*RRRRGG
Trigger: GCCACCTCTACGCCTCCTCCAAGCCTGTGATGGGCC...AGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCCTTTGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCGGCCCATCACAGGCTTaGAGGAGGCGTAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: AFGKLGLGASVTWQALPSGPSQA*RRRRGG
Trigger: GCCACCTCTACGCCTCCTCCAAGCCTGTGATGGGCC...GGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCCAACAAGGTCAGGGCTaGGTTCAGAAAGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPAQQGQG*VQKAIR
Trigger: CCTGATGGCTTTCTGAACCCAGCCCTGACCTTGTTG...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGCTGCTTCTATGTaGCAACCTGGACCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SPDLTSQQAAHHMLQVPRRAASM*QPGPRL
Trigger: GAGCCTGGGTCCAGGTTGCCACATAGAAGCAGCTCT...CCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGAGTGGGGGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTTTGGTGGGGTGGGAGTaGGGGATTCTGCTCATCGCT +
Preference number: 4 (lower is better)
Translates to: GVGDSAHRLGPQAGRGGFLVGWE*GILLIA
Trigger: AGCGATGAGCAGAATCCCCCACTCCCACCCCACCAA...AAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCCCCCACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCGTGCTCACTGCATGCTaGCTGTCTGTACTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEAVLTAC*LSVLRE
Trigger: CTCCCTCAGTACAGACAGCCAGCATGCAGTGAGCAC...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGGGCTTCTCCCATACTTaGCCATCGCTGAGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: SPDLTSQQAAHHMLQVPRGFSHT*PSLSAH
Trigger: GTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCC...CCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp GGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGACGCGCCTCCTCTCCTTaGTCACACCCAAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GFCSSLRTPGWQRRVSTGRASSP*SHPSAH
Trigger: GTGGGCACTTGGGTGTGACCAAGGAGAGGAGGCGCG...TCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp GGAGTGGGGGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCTGCAGCTGCGGGATTaGCTTATCTCTCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GVGDSAHRLGPQAGRGGFLQLRD*LISQGH
Trigger: GTGGCCCTGAGAGATAAGCCAATCCCGCAGCTGCAG...AAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCCCCCACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp GATCACATACCACTGACCCCACTATCACACCTGAGGTGCAGGGTTAACTCTTACGGGCCTTGGTGGGGCTaGAACCGGGGCGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: DHIPLTPLSHLRCRVNSYGPWWG*NRGGGG
Trigger: GCCTCCACCGCCCCGGTTCCAGCCCCACCAAGGCCC...GTAAGAGTTAACCCTGCACCTCAGGTGTGATAGTGGGGTCAGTGGTATGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp CCTAGGTCCAGTCTAGACTCCAGGGACCTCCAGGCCAGCCCAAGGCTCTTTGAACACCCACCACAGGGCTaGCCAACCCTCCTCTATGCT +
Preference number: 4 (lower is better)
Translates to: PRSSLDSRDLQASPRLFEHPPQG*PTLLYA
Trigger: AGCATAGAGGAGGGTTGGCCAGCCCTGTGGTGGGTG...TTCAAAGAGCCTTGGGCTGGCCTGGAGGTCCCTGGAGTCTAGACTGGACCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp CTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCGGACCCACTGGCTCTTaGCATCTTCCAGACGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPAGSASHVTGAQERRNCGPTGS*HLPDAS
Trigger: GGAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCC...GCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp CAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACAACAACCTCGCCTTCCTGGCTaGGCACCCGCCAGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: QPGPVILTSSQPSAVKQQPRLPG*APASRL
Trigger: AAGCCTACTGGCGGGTGCTCAGCCAGGAAGGCGAGG...TTGTTGTTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp TACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGCGGCTCGCTGCCCTCTaGGGCCACAGGGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: YRCPGEEKLHLCQQRRPRRLAAL*GHREVG
Trigger: ACCTACTTCCCTGTGGCCTCAGAGGGCAGCGAGCCG...CCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGACCACCGCCTGGCCTGTaGACTTGGAGAGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: GFCSSLRTPGWQRRVSTGPPPGL*TWRGCS
Trigger: GGAACATCCTCTCCAAGTTCACAGGCCAGGCGGTGG...TCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GGAGTGGGGGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTGCTTGGGAGCTTCTGTaGCCTGGCAAGCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GVGDSAHRLGPQAGRGGFAWELL*PGKLCL
Trigger: AAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGC...AAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCCCCCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGACACAGGCACAGGCTaGGGCCTTTGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GFCSSLRTPGWQRRVSTGDTGTG*GLWKAG
Trigger: CCCAGCTTTCCAAAGGCCTCAGCCTGTGCCTGTGTC...TCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp TTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGGACACAGGCACAGGCTaGGGCCTTTGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FCSSLRTPGWQRRVSTGEDTGTG*GLWKAG
Trigger: CCCAGCTTTCCAAAGGCCTCAGCCTGTGCCTGTGTC...CTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp AATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAAGCCAGGGAGAGCTGTTaGCCAGGCGCGCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: NVQPGPVILTSSQPSAVKARESC*PGAPPL
Trigger: GAGAGGAGGCGCGCCTGGTCAACAGCTCTCCCTGGC...TTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCTCAGTCAGGGGGAGGCGAAGGTaGGCCGGCTTTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSPTLPKHPECSHTFSSVRGRRR*AGFPAG
Trigger: CCCAGCAGGAAAGCCGGCTCACCTTCGCCTCCCCCT...GACTGAGGAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp ATGTGCTGCACAGGTCAAACTAGAGCGGGGAACCCAAGAACTGGTGGGGGCCGGTTATTCCTCAGGAGGTaGCCAGGCTGGTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: MCCTGQTRAGNPRTGGGRLFLRR*PGWSEA
Trigger: TGCCTCTGACCAGCCTGGTCACCTCCTGAGGAATAA...CCGGCCCCCACCAGTTCTTGGGTTCCCCGCTCTAGTTTGACCTGTGCAGCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp TGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAAGTAGGGCCGGCTCGCTaGCCTCTGAGGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: WKAGLGSFCDLASFAFLKVGPAR*PLRPQG
Trigger: TCCCTGTGGCCTCAGAGGGCAGCGAGCCGGCCCTAC...TTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GCCTTTGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCGAGAGGATGTTCCGGTaGACGTGTCCGCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AFGKLGLGASVTWQALPSERMFR*TCPQSQ
Trigger: CTGGCTCTGCGGACACGTGCACCGGAACATCCTCTC...GGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCAAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGTCGCTGAGTGCTCACTaGATGCTGGCTGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGSLSAH*MLAVCT
Trigger: AGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGA...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp AGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCGGCCTGAAGGAGGCCTaGCTGCCTCTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RRSFPNSPETSRMFPHLLGLKEA*LPLLPS
Trigger: GGAGGGGAGCAGAGGCAGGCAGGCCTCCTTCAGGCC...GAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp TGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAAGGCCTGAAGGAGGCCTaGCTGCCTCTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: WKAGLGSFCDLASFAFLKGLKEA*LPLLPS
Trigger: GGAGGGGAGCAGAGGCAGGCAGGCCTCCTTCAGGCC...TTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCGATGTGGGAAGCAAATaGAACACACCACGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GQPRPNLPAGSASHVTGADVGSK*NTPRRS
Trigger: ACTCCTCCGTGGTGTGTTCCATTTGCTTCCCACATC...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp CGGGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGGATGTGGGAAGCAAATaGAACACACCACGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RGSPDLTSQQAAHHMLQVDVGSK*NTPRRS
Trigger: ACTCCTCCGTGGTGTGTTCCATTTGCTTCCCACATC...CACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGGCCCAAGGATACCCTAGTATTAGCCTTTCCTAAGAGGAGGAGTTTCCCCAACGTCCCTGGGTGGTGCTaGGGGAGGCTGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: GPKDTLVLAFPKRRSFPNVPGWC*GRLARQ
Trigger: CTGACGTGCCAGCCTCCCCCAGCACCACCCAGGGAC...GTTGGGGAAACTCCTCCTCTTAGGAAAGGCTAATACTAGGGTATCCTTGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCCTCCCGTCCCTGGGTaGTGCTGGGGGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KLGLGASVTWQALPSLNFPPVPG*CWGRLA
Trigger: TGCCAGCCTCCCCCAGCACCACCCAGGGACGGGAGG...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AATTTGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCCATGCCTCCCGTCCCTaGGTGGTGCTGGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: NLECSAGPSHSNLISAVSHASRP*VVLGEA
Trigger: AGCCTCCCCCAGCACCACCCAGGGACGGGAGGCATG...GCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACCAAGAGGGCGTCCGTaGCCAGCCGGGCACTCTCGT +
Preference number: 4 (lower is better)
Translates to: WKAGLGSFCDLASFAFLKPRGRP*PAGHSR
Trigger: ACGAGAGTGCCCGGCTGGCCACGGACGCCCTCTTGG...TTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCTGAACAGCTCCACCGCCTaGCCTGTGAACTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CSSLRTPGWQRRVSTGELNSSTA*PVNLER
Trigger: CCTCTCCAAGTTCACAGGCCAGGCGGTGGAGCTGTT...CAGCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTGGCCCATCACAGGCTTaGAGGAGGCGTAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SRQRITCYRCPGEEKLHLGPSQA*RRRRGG
Trigger: GCCACCTCTACGCCTCCTCCAAGCCTGTGATGGGCC...AAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCTTCTATGTGGCAACCTaGACCCAGGCTCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GQPRPNLPAGSASHVTGAFYVAT*TQALKA
Trigger: AGCTTTGAGAGCCTGGGTCCAGGTTGCCACATAGAA...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp ACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTCACCTCTGCTCCCCTCCTaGGTGCCTCGATTCCCATGC +
Preference number: 4 (lower is better)
Translates to: TFVNKDDHGGETADGGWSPLLPS*VPRFPC
Trigger: GCATGGGAATCGAGGCACCCAGGAGGGGAGCAGAGG...TGACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp CCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCTCAGTCTTTCTCGGGCCGGGAGGGCTaGCTCAGACACCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PQLSRNIQNVPTPSPQSFSGREG*LRHLLG
Trigger: GCCAAGGAGGTGTCTGAGCCAGCCCTCCCGGCCCGA...GAAAGACTGAGGAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp GATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGGGACCCACTGGCTCTTaGCATCTTCCAGACGCTTCC +
Preference number: 4 (lower is better)
Translates to: DSAHRLGPQAGRGGFQLEGPTGS*HLPDAS
Trigger: GGAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCC...CTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCAGCGAATTTCCTGCCTaGCTTGGCACAGTATATCTC +
Preference number: 4 (lower is better)
Translates to: GQPRPNLPAGSASHVTGASEFPA*LGTVYL
Trigger: GAGATATACTGTGCCAAGTCAGGCAGGAAATTCGCT...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp ACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTCACCACCGCCTGGCCTGTaGACTTGGAGAGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: TFVNKDDHGGETADGGWSPPPGL*TWRGCS
Trigger: GGAACATCCTCTCCAAGTTCACAGGCCAGGCGGTGG...TGACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTAGGGGGAGGCGAAGGTaGGCCGGCTTTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KLGLGASVTWQALPSLNFRGRRR*AGFPAG
Trigger: CCCAGCAGGAAAGCCGGCTCACCTTCGCCTCCCCCT...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCGATTTACCGCTGTCCTaGGCAATGCTTCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: GSPDLTSQQAAHHMLQVPDLPLS*AMLLRT
Trigger: AGTTCTGAGAAGCATTGCTCAGGACAGCGGTAAATC...GGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR TCA 90 bp TGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAAGGGGCTACAGGGCCCTaGAGACGCGGACACACTTCG +
Preference number: 4 (lower is better)
Translates to: WKAGLGSFCDLASFAFLKGATGP*RRGHTS
Trigger: CGAAGTGTGTCCGCGTCTTCAGGGCCCTGTAGCCCC...TTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp CAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACAACAACTCCCAGGACCGGCGTaGAGGGCACCTCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: QPGPVILTSSQPSAVKQQLPGPA*RAPPRS
Trigger: ACTTCTTGGAGGTGCCCTGCACGCCGGTCCTGGGAG...TTGTTGTTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AATTTGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCCAGTCCCTTAGGGCCTaGTTCCGCCCCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: NLECSAGPSHSNLISAVSQSLRA*FRPSQG
Trigger: ACCCTGGGAGGGGCGGAAGCAGGCCCTAAGGGACTG...GCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp TTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGAGGGGTTGGAGGACGTaGGGTCACTGGCGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LQVPRRGETAPLSTKTTTRGWRT*GHWRSH
Trigger: GTGGCTCCGCCAGTGACCGCACGTCCTCCAACCCCT...CGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCACCTCCCAACACTTTTaGACTGGGGATCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEATSQHF*TGDQAS
Trigger: GGAAGCTTGATCCCCAGTGCAAAAGTGTTGGGAGGT...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAGAACGAGCCGAGGCTaGCGGCGGCCCACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVRTSRG*RRPTSP
Trigger: TGGGCTCGTGGGCCGCCGGCAGCCTCGGCTCGTTCT...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGTGTCATTGTCGTGTTTaGAGAGACCGCAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SPDLTSQQAAHHMLQVPRCHCRV*RDRRGS
Trigger: GGAACCTCTGCGGTCTCTGCAAACACGACAATGACA...CCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR GCA 90 bp ACTCCTCAGCTAGCTGCATCCCTGGTGGCTACAGCTTCAGATGGCTCCCCCATATGCTCCCCTCCTGGGTaGCTCGATTCCCATGCTGTT +
Preference number: 4 (lower is better)
Translates to: TPQLAASLVATASDGSPICSPPG*LDSHAV
Trigger: AACAGCATGGGAATCGAGGCACCCAGGAGGGGAGCA...TATGGGGGAGCCATCTGAAGCTGTAGCCACCAGGGATGCAGCTAGCTGAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp TTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGTGCTCCCCTCCTGGGTaGCTCGATTCCCATGCTGTT +
Preference number: 4 (lower is better)
Translates to: FCSSLRTPGWQRRVSTGECSPPG*LDSHAV
Trigger: AACAGCATGGGAATCGAGGCACCCAGGAGGGGAGCA...CTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR GCA 90 bp CCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTCAGGTGAGCCGGCTTTCCTaGTGGGTTTCGCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: PLSTKTTTEGRLLMEGGQVSRLS*WVSQLS
Trigger: GGAGAGTTGCGAAACCCAGCAGGAAAGCCGGCTCAC...CTGACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR GCA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCATCTCTCAGGGCCACCTaGCCTGCCCTCGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSSLRAT*PALGPG
Trigger: TCCCGGCCCGAGGGCAGGGCAGGTGGCCCTGAGAGA...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AATTTGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTAGGCCCCCAGGTTaGTGTAGACAGCGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: NLECSAGPSHSNLISAVSCRPPG*CRQRRA
Trigger: CGCCCGCCGCTGTCTACAGCAACCTGGGGGCCTACA...GCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCCTGAGTCTACTAACCTaGCTTGTCCAACCCAACACC +
Preference number: 4 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEALSLLT*LVQPNT
Trigger: GGTGTTGGGTTGGACAAGGCAGGTTAGTAGACTCAG...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGGATGTGGGAAGCAAATaGAACACACCACGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGRDVGSK*NTPRRS
Trigger: ACTCCTCCGTGGTGTGTTCCATTTGCTTCCCACATC...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp CCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCTCAGTCTTTCGGTGCTGGGGGAGGCTaGCACGTCAGCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PQLSRNIQNVPTPSPQSFGAGGG*HVSSSR
Trigger: TCTGGAGGAGCTGACGTGCCAGCCTCCCCCAGCACC...GAAAGACTGAGGAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAGGTGCTGGGGGAGGCTaGCACGTCAGCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AHHMLQVPRRGETAPLSTGAGGG*HVSSSR
Trigger: TCTGGAGGAGCTGACGTGCCAGCCTCCCCCAGCACC...TGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTGTCCCTGGGTGGTGCTaGGGGAGGCTGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: KLGLGASVTWQALPSLNFVPGWC*GRLARQ
Trigger: CTGACGTGCCAGCCTCCCCCAGCACCACCCAGGGAC...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTCCAAGAGGGCGTCCGTaGCCAGCCGGGCACTCTCGT +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLPRGRP*PAGHSR
Trigger: ACGAGAGTGCCCGGCTGGCCACGGACGCCCTCTTGG...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGACACGGGGGCTCCCTaGCCTGGGCCTGGATGTACT +
Preference number: 4 (lower is better)
Translates to: RRNCTFVNKDDHGGETADDTGAP*PGPGCT
Trigger: AGTACATCCAGGCCCAGGCCAGGGAGCCCCCGTGTC...ATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTAACAGCTCCACCGCCTaGCCTGTGAACTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: APLSTKTTTEGRLLMEGGNSSTA*PVNLER
Trigger: CCTCTCCAAGTTCACAGGCCAGGCGGTGGAGCTGTT...ACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTTTGGTGGGGTGGGAGTaGGGGATTCTGCTCATCGCT +
Preference number: 4 (lower is better)
Translates to: APLSTKTTTEGRLLMEGGLVGWE*GILLIA
Trigger: AGCGATGAGCAGAATCCCCCACTCCCACCCCACCAA...ACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGTCTGTTCCCAGCTCTTaGTCTTCACACAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGSVPSS*SSHRPR
Trigger: TCTGGGTCTGTGTGAAGACCAAGAGCTGGGAACAGA...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCACCCCAAGGGCCTTGGTaGGGCTGGAACCGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSPQGPW*GWNRGG
Trigger: ACCGCCCCGGTTCCAGCCCCACCAAGGCCCTTGGGG...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GCCTTTGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCGTTGAGGTGGGTCTTTaGGTCTCAGGGAGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: AFGKLGLGASVTWQALPSVEVGL*VSGSAQ
Trigger: CTGGGCACTCCCTGAGACCCAAAGACCCACCTCAAC...GGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCCTTTTCAAAGGGAAGTaGCTCAACGCCACTCGTCGT +
Preference number: 4 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEALFKGK*LNATRR
Trigger: ACGACGAGTGGCGTTGAGCCACTTCCCTTTGAAAAG...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp AGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATTTTGCCCAGGTGCCTTaGCCGGCTCATGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: RRNCTFVNKDDHGGETADFAQVP*PAHASR
Trigger: ACGGGAGGCATGAGCCGGTCAAGGCACCTGGGCAAA...ATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTCGGCTCGCTGCCCTCTaGGGCCACAGGGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLRLAAL*GHREVG
Trigger: ACCTACTTCCCTGTGGCCTCAGAGGGCAGCGAGCCG...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGCCACCGCCTGGCCTGTaGACTTGGAGAGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: GETAPLSTKTTTEGRLLMPPPGL*TWRGCS
Trigger: GGAACATCCTCTCCAAGTTCACAGGCCAGGCGGTGG...CATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp CAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACAACAACCACCGCCTGGCCTGTaGACTTGGAGAGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: QPGPVILTSSQPSAVKQQPPPGL*TWRGCS
Trigger: GGAACATCCTCTCCAAGTTCACAGGCCAGGCGGTGG...TTGTTGTTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGACTCAGCCGTCAGCTGTaGAACAACAAGGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GFCSSLRTPGWQRRVSTGLSRQL*NNKVRA
Trigger: AGCCCTGACCTTGTTGTTTCACAGCTGACGGCTGAG...TCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR TCA 90 bp GAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAGACACAGGCACAGGCTaGGGCCTTTGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ECSAGPSHSNLISAVSCEDTGTG*GLWKAG
Trigger: CCCAGCTTTCCAAAGGCCTCAGCCTGTGCCTGTGTC...TTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp TTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGCTTCTGCCCAGAAGTaGCCCTCGGCGGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LQVPRRGETAPLSTKTTTASAQK*PSAVLL
Trigger: GAGCAGAACCGCCGAGGGTCACTTCTGGGCAGAAGC...CGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGATAGGATTCTGCCAGTaGGCTGGGAACTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGRIGFCQ*AGNCSV
Trigger: AACAGAACAGTTCCCAGCTCACTGGCAGAATCCTAT...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCAGTCAGTGTTGGCGCTaGGAAACTGCACAAAATGGT +
Preference number: 4 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEASQCWR*ETAQNG
Trigger: ACCATTTTGTGCAGTTTCTCAGCGCCAACACTGACT...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAACTCCACAGCGAAGGCTaGGCTTCCCCGCCAAAAACC +
Preference number: 4 (lower is better)
Translates to: ECSAGPSHSNLISAVSCELHSEG*ASPPKT
Trigger: GGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAG...TTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp GCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCTCCCAGGACCGGCGTaGAGGGCACCTCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: AGLGSFCDLASFAFLKLSLPGPA*RAPPRS
Trigger: ACTTCTTGGAGGTGCCCTGCACGCCGGTCCTGGGAG...AGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp ATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCGCCTTGACCGGCTCATaGCTCCCGTCCCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: MLQVPRRGETAPLSTKTTALTGS*LPSLGG
Trigger: ACCACCCAGGGACGGGAGGCATGAGCCGGTCAAGGC...GGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGGCTGAGGCCCAGCTGTaGAGTAGGGCCGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVAEAQL*SRAGSL
Trigger: CAGCGAGCCGGCCCTACTGCACAGCTGGGCCTCAGC...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCTCTCTGATGTTGTTGTaGTTGACGGTCTGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: GQPRPNLPAGSASHVTGASLMLL*LTVWKY
Trigger: GTACTTCCAGACCGTCAAGCACAACAACATCAGAGA...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCCAGGAGAGGAGAAACTaGACCTTTGTCAACAAAGAC +
Preference number: 4 (lower is better)
Translates to: GSPDLTSQQAAHHMLQVPQERRN*TFVNKD
Trigger: GTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTG...GGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp TTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGTTGGCCATCGCTGAGTaGTCACTGCATGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FCSSLRTPGWQRRVSTGELAIAE*SLHAGC
Trigger: ACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAA...CTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR GCA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCTTGGCGCTGAGAAACTaGACAAAATGGTCCCACATG +
Preference number: 4 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEALALRN*TKWSHM
Trigger: CATGTGGGACCATTTTGTGCAGTTTCTCAGCGCCAA...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGAGCTCCTTTCTCCCATaGCCTCTCAAGTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGRSSFLP*PLKCLS
Trigger: TGACAAACACTTGAGAGGGCATGGGAGAAAGGAGCT...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGGACTGGCCTGGGCACTaGAGTGGGGCCAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVDWPGH*SGASPG
Trigger: GCCAGGACTGGCCCCACTGCAGTGCCCAGGCCAGTC...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp AGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCAGCTGAGCCCTCCCTaGTGCTCAAGACTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RRSFPNSPETSRMFPHLLQLSPP*CSRLAW
Trigger: CCAGGCCAGTCTTGAGCAGCAGGGAGGGCTCAGCTG...GAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GGAGTGGGGGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTGATGTGGGAAGCAAATaGAACACACCACGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GVGDSAHRLGPQAGRGGFDVGSK*NTPRRS
Trigger: ACTCCTCCGTGGTGTGTTCCATTTGCTTCCCACATC...AAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCCCCCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGTGGGCCTGGATGTACTaGGCCTCCACCGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: GETAPLSTKTTTEGRLLMWAWMY*ASTEDK
Trigger: CTTGTCCTCGGTGGAGGCCCAGTACATCCAGGCCCA...CATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp ATGTGCTGCACAGGTCAAACTAGAGCGGGGAACCCAAGAACTGGTGGGGGCCGGAACTTCTCCCGGATTTaGCCAGCGAATTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: MCCTGQTRAGNPRTGGGRNFSRI*PANFLP
Trigger: AGGCAGGAAATTCGCTGGCCAAATCCGGGAGAAGTT...CCGGCCCCCACCAGTTCTTGGGTTCCCCGCTCTAGTTTGACCTGTGCAGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GGGCCCAAGGATACCCTAGTATTAGCCTTTCCTAAGAGGAGGAGTTTCCCCAACGGCCCATCACAGGCTTaGAGGAGGCGTAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GPKDTLVLAFPKRRSFPNGPSQA*RRRRGG
Trigger: GCCACCTCTACGCCTCCTCCAAGCCTGTGATGGGCC...GTTGGGGAAACTCCTCCTCTTAGGAAAGGCTAATACTAGGGTATCCTTGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTAGGACGTGCGGTCACTaGCGGAGCCACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KLGLGASVTWQALPSLNFRTCGH*RSHCCC
Trigger: GCAGCAGCAGTGGCTCCGCCAGTGACCGCACGTCCT...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCCTCATCCTCCTTCCCTaGCAGACATTACTAGTTGAT +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPALILLP*QTLLVD
Trigger: ATCAACTAGTAATGTCTGCCAGGGAAGGAGGATGAG...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp TGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGGTGCTCACTGCATGCTaGCTGTCTGTACTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CTFVNKDDHGGETADGGWVLTAC*LSVLRE
Trigger: CTCCCTCAGTACAGACAGCCAGCATGCAGTGAGCAC...CCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp ACTCCTCAGCTAGCTGCATCCCTGGTGGCTACAGCTTCAGATGGCTCCCCCATATCTTGGAACACTGTCTaGAGAACGAGCCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TPQLAASLVATASDGSPISWNTV*RTSRGC
Trigger: GCAGCCTCGGCTCGTTCTCCAGACAGTGTTCCAAGA...TATGGGGGAGCCATCTGAAGCTGTAGCCACCAGGGATGCAGCTAGCTGAGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCCTCTGCTCCCCTCCTaGGTGCCTCGATTCCCATGC +
Preference number: 4 (lower is better)
Translates to: RRSFPNSPETSRMFPHLLPLLPS*VPRFPC
Trigger: GCATGGGAATCGAGGCACCCAGGAGGGGAGCAGAGG...GAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR CAA 72 bp TCTTTTCAAAGGGAAGTGGCTCAACGCCACTCGTCGTaGAGGTGGGTCTTTGGGTCTCAGGGAGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SFQREVAQRHSS*RWVFGSQGVPS
Trigger: GCTGGGCACTCCCTGAGACCCAAAGACCCACCTCAACGACGAGTGGCGTTGAGCCACTTCCCTTTGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp GCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAACGGCTCGCTGCCCTCTaGGGCCACAGGGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: ASHVTGAQERRNCTFVNKRLAAL*GHREVG
Trigger: ACCTACTTCCCTGTGGCCTCAGAGGGCAGCGAGCCG...TTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAGACACAGGCACAGGCTaGGGCCTTTGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AHHMLQVPRRGETAPLSTDTGTG*GLWKAG
Trigger: CCCAGCTTTCCAAAGGCCTCAGCCTGTGCCTGTGTC...TGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp ATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCGCTTCTGCCCAGAAGTaGCCCTCGGCGGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: MLQVPRRGETAPLSTKTTASAQK*PSAVLL
Trigger: GAGCAGAACCGCCGAGGGTCACTTCTGGGCAGAAGC...GGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCCCTCTGATTGGTTCCTaGATATGCATAGGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEAPLIGS*ICIGEN
Trigger: ATTCTCCCCTATGCATATTCAGGAACCAATCAGAGG...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AATTTGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCCCACAGGGAAGTAGGTaGCGGACTGTAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NLECSAGPSHSNLISAVSPQGSR*RTVGSW
Trigger: CCAGCTCCCTACAGTCCGGCACCTACTTCCCTGTGG...GCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp CTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCGGCCAGCGAATTTCCTaGCTGACTTGGCACAGTATA +
Preference number: 4 (lower is better)
Translates to: LPAGSASHVTGAQERRNCGQRIS*LTWHSI
Trigger: TATACTGTGCCAAGTCAGGCAGGAAATTCGCTGGCC...GCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp TGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCTGGGCCAGCGAATTTCCTaGCTGACTTGGCACAGTATA +
Preference number: 4 (lower is better)
Translates to: CSSLRTPGWQRRVSTGELGQRIS*LTWHSI
Trigger: TATACTGTGCCAAGTCAGGCAGGAAATTCGCTGGCC...CAGCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp TGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAAGAGAGGATGTTCCGGTaGACGTGTCCGCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: WKAGLGSFCDLASFAFLKERMFR*TCPQSQ
Trigger: CTGGCTCTGCGGACACGTGCACCGGAACATCCTCTC...TTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp CTTTCTAAGCATCCTATATTTCTTTGCACTCAGCTAGGCTGTGCCCTCAGGACCAGGGGTTGGAGGACGTaGGGTCACTGGCGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LSKHPIFLCTQLGCALRTRGWRT*GHWRSH
Trigger: GTGGCTCCGCCAGTGACCGCACGTCCTCCAACCCCT...GGTCCTGAGGGCACAGCCTAGCTGAGTGCAAAGAAATATAGGATGCTTAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAGGTCAAGTTACTTaGCCAAGATCACTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPAKGQVT*PRSLSW
Trigger: CCAGCTAAGTGATCTTGGGCAAGTAACTTGACCTTT...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGGAACCTTCTGGAATGTaGTGCACAGGTCAAACTAGA +
Preference number: 4 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGEPSGM*CTGQTR
Trigger: TCTAGTTTGACCTGTGCAGCACATTCCAGAAGGTTC...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCCCATCTATCTCTCAGTaGCTCTGTTTACCCATTTGT +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPAPSISQ*LCLPIC
Trigger: ACAAATGGGTAAACAGAGGCACTGAGAGATAGATGG...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp CCTAGGTCCAGTCTAGACTCCAGGGACCTCCAGGCCAGCCCAAGGCTCTTTGAAGCAATCTCAGCTCATTaGAACCTCTGCTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PRSSLDSRDLQASPRLFEAISAH*NLCFLG
Trigger: ACCCAGGAAGCAGAGGTTGCAATGAGCTGAGATTGC...TTCAAAGAGCCTTGGGCTGGCCTGGAGGTCCCTGGAGTCTAGACTGGACCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGGTGCTGGGGGAGGCTaGCACGTCAGCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ASHVTGAQERRNCTFVNKGAGGG*HVSSSR
Trigger: TCTGGAGGAGCTGACGTGCCAGCCTCCCCCAGCACC...TTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGGCTGGCCGGACCCACTaGCTCTTGACATCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: YRCPGEEKLHLCQQRRPRAGRTH*LLTSSR
Trigger: TCTGGAAGATGTCAAGAGCCAGTGGGTCCGGCCAGC...CCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTAAAGTCAGCCCTGGCTaGCCGGACCCACTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: AGLGSFCDLASFAFLKLSKVSPG*PDPLAL
Trigger: AAGAGCCAGTGGGTCCGGCCAGCCAGGGCTGACTTT...AGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAATCCCTGGCCTGGGCCTaGATGTACTGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ASHVTGAQERRNCTFVNKSLAWA*MYWAST
Trigger: GGTGGAGGCCCAGTACATCCAGGCCCAGGCCAGGGA...TTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAACACCCCACGCTTGTTaGCTGCCTCTAGAATGTCAC +
Preference number: 4 (lower is better)
Translates to: GFCSSLRTPGWQRRVSTGTPHAC*LPLECH
Trigger: GTGACATTCTAGAGGCAGCCAACAAGCGTGGGGTGT...TCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR CCA 90 bp GCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAAGGACGTGCGGTCACTaGCGGAGCCACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ASHVTGAQERRNCTFVNKRTCGH*RSHCCC
Trigger: GCAGCAGCAGTGGCTCCGCCAGTGACCGCACGTCCT...TTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGGGGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTACTACATATCCATTGTaGGTTGGTGGGGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GGFCSSLRTPGWQRRVSTTTYPL*VGGVGV
Trigger: CACTCCCACCCCACCAACCCACAATGGATATGTAGT...AGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCGCATCCCATACTGTATaGCAGAAGAAAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPAASHTV*QKKERE
Trigger: TTCTCTCTCTTTCTTCTGCCATACAGTATGGGATGC...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTCGCGCCTCCTCTCCTTaGTCACACCCAAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLRASSP*SHPSAH
Trigger: GTGGGCACTTGGGTGTGACCAAGGAGAGGAGGCGCG...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp CAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACAACAAAGCCGGCTTTCCTGCTaGGTTTCGCAACTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QPGPVILTSSQPSAVKQQSRLSC*VSQLSL
Trigger: GAGGGAGAGTTGCGAAACCCAGCAGGAAAGCCGGCT...TTGTTGTTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAGGCAAGTGGATGGCCTaGGGCCTGGGAACATTGAAC +
Preference number: 4 (lower is better)
Translates to: ECSAGPSHSNLISAVSCEGKWMA*GLGTLN
Trigger: GTTCAATGTTCCCAGGCCCCAGGCCATCCACTTGCC...TTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp TTCCTAAGAGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACGGGGAACCCAAGAACTaGTGGGGGCCGGCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: FLRGGVSPTLPKHPECSHGEPKN*WGPASG
Trigger: TCCACTTGCCGGCCCCCACCAGTTCTTGGGTTCCCC...GTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCTCTTAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACAGTGGGGCCAGTCCTaGCCCCTGACAACTCAAGCT +
Preference number: 4 (lower is better)
Translates to: NVQPGPVILTSSQPSAVKQWGQS*PLTTQA
Trigger: AGCTTGAGTTGTCAGGGGCCAGGACTGGCCCCACTG...TTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACTGGTCAGAGGCACCTaGATCTGGGGACAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NVQPGPVILTSSQPSAVKLVRGT*IWGQLS
Trigger: GCTCAGCTGTCCCCAGATCCAGGTGCCTCTGACCAG...TTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp TGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAAGGACCCACTGGCTCTTaGCATCTTCCAGACGCTTCC +
Preference number: 4 (lower is better)
Translates to: WKAGLGSFCDLASFAFLKGPTGS*HLPDAS
Trigger: GGAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCC...TTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp TGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCTGAGCGAATTTCCTGCCTaGCTTGGCACAGTATATCTC +
Preference number: 4 (lower is better)
Translates to: CSSLRTPGWQRRVSTGELSEFPA*LGTVYL
Trigger: GAGATATACTGTGCCAAGTCAGGCAGGAAATTCGCT...CAGCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp ATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCCCTATCTCCCAGGACTaGGCTCGACACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: MLQVPRRGETAPLSTKTTPISQD*ARHRHR
Trigger: CCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGG...GGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GATCACATACCACTGACCCCACTATCACACCTGAGGTGCAGGGTTAACTCTTACCCTATCTCCCAGGACTaGGCTCGACACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: DHIPLTPLSHLRCRVNSYPISQD*ARHRHR
Trigger: CCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGG...GTAAGAGTTAACCCTGCACCTCAGGTGTGATAGTGGGGTCAGTGGTATGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTCCTATCTCCCAGGACTaGGCTCGACACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLPISQD*ARHRHR
Trigger: CCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGG...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp CTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCCACCTGAAGGAATGTTaGAGGTACTGCAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LPAGSASHVTGAQERRNCHLKEC*RYCKLF
Trigger: GAAGAGCTTGCAGTACCTTCAACATTCCTTCAGGTG...GCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR TCA 90 bp GTCAGAGGCCACCAGGAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGAATCTCATGAATACATaGGGGCAGAATACTCATGGC +
Preference number: 4 (lower is better)
Translates to: VRGHQEEELCALVPPQRRNLMNT*GQNTHG
Trigger: GCCATGAGTATTCTGCCCTCATGTATTCATGAGATT...CCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTCCTGGTGGCCTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp TTCCTAAGAGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACCCACAGGGAAGTAGGTaGCGGACTGTAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FLRGGVSPTLPKHPECSHPQGSR*RTVGSW
Trigger: CCAGCTCCCTACAGTCCGGCACCTACTTCCCTGTGG...GTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCTCTTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTCCACAGGGAAGTAGGTaGCGGACTGTAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLPQGSR*RTVGSW
Trigger: CCAGCTCCCTACAGTCCGGCACCTACTTCCCTGTGG...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GCCTTTGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCACCTCCCAACACTTTTaGACTGGGGATCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: AFGKLGLGASVTWQALPSTSQHF*TGDQAS
Trigger: GGAAGCTTGATCCCCAGTGCAAAAGTGTTGGGAGGT...GGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GCCTTTGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCCCTTCTGGAATGTGCTaGACAGGTCAAACTAGAGCG +
Preference number: 4 (lower is better)
Translates to: AFGKLGLGASVTWQALPSPSGMC*TGQTRA
Trigger: CGCTCTAGTTTGACCTGTGCAGCACATTCCAGAAGG...GGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp ACTCCTCAGCTAGCTGCATCCCTGGTGGCTACAGCTTCAGATGGCTCCCCCATATCTGTGACGGAGTCTTaGTTTGTTGCCCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: TPQLAASLVATASDGSPISVTES*FVAHAG
Trigger: TCCAGCATGGGCAACAAAGCAAGACTCCGTCACAGA...TATGGGGGAGCCATCTGAAGCTGTAGCCACCAGGGATGCAGCTAGCTGAGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGCTGGCCGGACCCACTaGCTCTTGACATCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RRNCTFVNKDDHGGETADAGRTH*LLTSSR
Trigger: TCTGGAAGATGTCAAGAGCCAGTGGGTCCGGCCAGC...ATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTAAAGTCAGCCCTGGCTaGCCGGACCCACTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: KLGLGASVTWQALPSLNFKVSPG*PDPLAL
Trigger: AAGAGCCAGTGGGTCCGGCCAGCCAGGGCTGACTTT...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTGGGCCTGGATGTACTaGGCCTCCACCGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLWAWMY*ASTEDK
Trigger: CTTGTCCTCGGTGGAGGCCCAGTACATCCAGGCCCA...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp CCTAGGTCCAGTCTAGACTCCAGGGACCTCCAGGCCAGCCCAAGGCTCTTTGAAAGTACACAGTGGCGCTaGATTTTTCCTTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: PRSSLDSRDLQASPRLFESTQWR*IFPSGR
Trigger: CCTACCTGAAGGAAAAATCCAGCGCCACTGTGTACT...TTCAAAGAGCCTTGGGCTGGCCTGGAGGTCCCTGGAGTCTAGACTGGACCTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCTCAGTCAGGATGACCAGGACCTaGCTAGTCCGGGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: VSPTLPKHPECSHTFSSVRMTRT*LVRVMQ
Trigger: CTGCATCACCCGGACTAGCCAGGTCCTGGTCATCCT...GACTGAGGAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp TGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGAACTTCTCCCGGATTTaGCCAGCGAATTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: CTFVNKDDHGGETADGGWNFSRI*PANFLP
Trigger: AGGCAGGAAATTCGCTGGCCAAATCCGGGAGAAGTT...CCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGTTCTATGTGGCAACCTaGACCCAGGCTCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: DSAHRLGPQAGRGGFQLEFYVAT*TQALKA
Trigger: AGCTTTGAGAGCCTGGGTCCAGGTTGCCACATAGAA...CTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGAGCTGCTTCTATGTaGCAACCTGGACCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: YRCPGEEKLHLCQQRRPRRAASM*QPGPRL
Trigger: GAGCCTGGGTCCAGGTTGCCACATAGAAGCAGCTCT...CCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTATTCTGCCAGTGAGCTaGGAACTGTTCTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: APLSTKTTTEGRLLMEGGILPVS*ELFCCH
Trigger: GTGGCAACAGAACAGTTCCCAGCTCACTGGCAGAAT...ACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp GATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGTCTGTTCCCAGCTCTTaGTCTTCACACAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: DSAHRLGPQAGRGGFQLESVPSS*SSHRPR
Trigger: TCTGGGTCTGTGTGAAGACCAAGAGCTGGGAACAGA...CTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp CCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCTCAGTCTTTCCTGCAGCTGCGGGATTaGCTTATCTCTCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PQLSRNIQNVPTPSPQSFLQLRD*LISQGH
Trigger: GTGGCCCTGAGAGATAAGCCAATCCCGCAGCTGCAG...GAAAGACTGAGGAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGGAAGGGCCTCCAGGTTaGAGTCAGCCTCGGCACCAG +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVEGPPG*SQPRHQ
Trigger: CTGGTGCCGAGGCTGACTCCAACCTGGAGGCCCTTC...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
3UTR CAA 72 bp ATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTaGTCAACAAAGACGACCACGGAGGGGAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: MLQVPRRGETAP*STKTTTEGRLL
Trigger: CAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GGGCCCAAGGATACCCTAGTATTAGCCTTTCCTAAGAGGAGGAGTTTCCCCAACGGCACCTCCAAGAAGTaGTTTACCGCTGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GPKDTLVLAFPKRRSFPNGTSKK*FTAVLS
Trigger: GCTCAGGACAGCGGTAAATCACTTCTTGGAGGTGCC...GTTGGGGAAACTCCTCCTCTTAGGAAAGGCTAATACTAGGGTATCCTTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp GCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAGGCACCTCCAAGAAGTaGTTTACCGCTGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: AHHMLQVPRRGETAPLSTGTSKK*FTAVLS
Trigger: GCTCAGGACAGCGGTAAATCACTTCTTGGAGGTGCC...TGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTGGACCCACTGGCTCTTaGCATCTTCCAGACGCTTCC +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLGPTGS*HLPDAS
Trigger: GGAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCC...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp TGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCTGCCTCTGATTGGTTCCTaGATATGCATAGGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: CSSLRTPGWQRRVSTGELPLIGS*ICIGEN
Trigger: ATTCTCCCCTATGCATATTCAGGAACCAATCAGAGG...CAGCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR TCA 90 bp AGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCATACTTGGCCATCGCTaGGTGCTCACTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: RRSFPNSPETSRMFPHLLILGHR*VLTACW
Trigger: CCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTAT...GAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTAACGCCACTCGTCGTTaGGGTGGGTCTTTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLNATRR*GGSLGL
Trigger: GAGACCCAAAGACCCACCTCAACGACGAGTGGCGTT...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp TGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCTGTCTCTGATGTTGTTGTaGTTGACGGTCTGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: CSSLRTPGWQRRVSTGELSLMLL*LTVWKY
Trigger: GTACTTCCAGACCGTCAAGCACAACAACATCAGAGA...CAGCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGTCTTGGTTGAATAAATaGTTGAGTGTCTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGSWLNK*LSVSLR
Trigger: TCTCAGGGAGACACTCAAGCATTTATTCAACCAAGA...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCAGTGCCCACCCCTCCCTaGCCTATGAAGGAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSVPTPP*PMKELL
Trigger: AAGGAGCTCCTTCATAGGGCAGGGAGGGGTGGGCAC...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCATGGGCCTGGATGTACTaGGCCTCCACCGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSWAWMY*ASTEDK
Trigger: CTTGTCCTCGGTGGAGGCCCAGTACATCCAGGCCCA...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp CACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGAGGATGACCAGGACCTaGCTAGTCCGGGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: HMLQVPRRGETAPLSTKTRMTRT*LVRVMQ
Trigger: CTGCATCACCCGGACTAGCCAGGTCCTGGTCATCCT...CGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR CCA 90 bp CAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTTGTCACACATCTCCTaGAAGAGCTTCACACCTCCC +
Preference number: 4 (lower is better)
Translates to: QAAHHMLQVPRRGETAPLLSHIS*KSFTPP
Trigger: GGGAGGTGTGAAGCTCTTCCAGGAGATGTGTGACAA...CAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR CCA 90 bp AGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTAACTTCTCCCGGATTTaGCCAGCGAATTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SRQRITCYRCPGEEKLHLNFSRI*PANFLP
Trigger: AGGCAGGAAATTCGCTGGCCAAATCCGGGAGAAGTT...AAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTAACAGCTCCACCGCCTaGCCTGTGAACTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLNSSTA*PVNLER
Trigger: CCTCTCCAAGTTCACAGGCCAGGCGGTGGAGCTGTT...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGCAACAAGGTCAGGGCTaGGTTCAGAAAGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: RGETAPLSTKTTTEGRLLQQGQG*VQKAIR
Trigger: CCTGATGGCTTTCTGAACCCAGCCCTGACCTTGTTG...CAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR CCA 90 bp AATTTGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCAGAGCTGCTTCTATGTaGCAACCTGGACCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: NLECSAGPSHSNLISAVSRAASM*QPGPRL
Trigger: GAGCCTGGGTCCAGGTTGCCACATAGAAGCAGCTCT...GCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR CCA 90 bp ATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCTTGGTGGGGTGGGAGTaGGGGATTCTGCTCATCGCT +
Preference number: 4 (lower is better)
Translates to: MLQVPRRGETAPLSTKTTLVGWE*GILLIA
Trigger: AGCGATGAGCAGAATCCCCCACTCCCACCCCACCAA...GGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAGGGCAGAATACTCATaGCCTAATTACTTCTCATTA +
Preference number: 4 (lower is better)
Translates to: EEELCALVPPQRRLSFPARAEYS*PNYFSL
Trigger: TAATGAGAAGTAATTAGGCCATGAGTATTCTGCCCT...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCAGGGCAGAATACTCATaGCCTAATTACTTCTCATTA +
Preference number: 4 (lower is better)
Translates to: GQPRPNLPAGSASHVTGARAEYS*PNYFSL
Trigger: TAATGAGAAGTAATTAGGCCATGAGTATTCTGCCCT...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp CCTAGGTCCAGTCTAGACTCCAGGGACCTCCAGGCCAGCCCAAGGCTCTTTGAACACTTAGCTGGTAAATaGCAGAGCCCATGTACTTTC +
Preference number: 4 (lower is better)
Translates to: PRSSLDSRDLQASPRLFEHLAGK*QSPCTF
Trigger: GAAAGTACATGGGCTCTGCCATTTACCAGCTAAGTG...TTCAAAGAGCCTTGGGCTGGCCTGGAGGTCCCTGGAGTCTAGACTGGACCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GCCTTTGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTCACCCCTAATTCATTaGGCCCAAGGATACCCTAGT +
Preference number: 4 (lower is better)
Translates to: AFGKLGLGASVTWQALPSSPLIH*AQGYPS
Trigger: ACTAGGGTATCCTTGGGCCCAATGAATTAGGGGTGA...GGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp ACTCCTCAGCTAGCTGCATCCCTGGTGGCTACAGCTTCAGATGGCTCCCCCATAATAGATAACGGGTTCTaGGGCCTCACCCCTAATTCA +
Preference number: 4 (lower is better)
Translates to: TPQLAASLVATASDGSPIIDNGF*GLTPNS
Trigger: TGAATTAGGGGTGAGGCCCCAGAACCCGTTATCTAT...TATGGGGGAGCCATCTGAAGCTGTAGCCACCAGGGATGCAGCTAGCTGAGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTGGCACCTCCAAGAAGTaGTTTACCGCTGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLGTSKK*FTAVLS
Trigger: GCTCAGGACAGCGGTAAATCACTTCTTGGAGGTGCC...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp ATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCCTCAGCCGTCAGCTGTaGAACAACAAGGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: MLQVPRRGETAPLSTKTTLSRQL*NNKVRA
Trigger: AGCCCTGACCTTGTTGTTTCACAGCTGACGGCTGAG...GGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR TCA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTGCTTGGGAGCTTCTGTaGCCTGGCAAGCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: KLGLGASVTWQALPSLNFAWELL*PGKLCL
Trigger: AAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGC...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp TTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGAGAGAAGTCCTCACCTaGAGGAATGTTGAAGGTACT +
Preference number: 4 (lower is better)
Translates to: FCSSLRTPGWQRRVSTGEREVLT*RNVEGT
Trigger: AGTACCTTCAACATTCCTTCAGGTGAGGACTTCTCT...CTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR TCA 90 bp CTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCCAAGCTTCCAACACATaGACTTTAGGAGACACATTC +
Preference number: 4 (lower is better)
Translates to: LPAGSASHVTGAQERRNCQASNT*TLGDTF
Trigger: GAATGTGTCTCCTAAAGTTCATGTGTTGGAAGCTTG...GCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR TCA 90 bp AGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAAGCATTACAGATCCTCTaGTTGGTTCCTGAATATGCA +
Preference number: 4 (lower is better)
Translates to: RALCSRPSTAKAELPRQKALQIL*LVPEYA
Trigger: TGCATATTCAGGAACCAATCAGAGGATCTGTAATGC...TTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTATACTTGGCCATCGCTaGGTGCTCACTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLILGHR*VLTACW
Trigger: CCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTAT...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGTCTCTGATGTTGTTGTaGTTGACGGTCTGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: DSAHRLGPQAGRGGFQLESLMLL*LTVWKY
Trigger: GTACTTCCAGACCGTCAAGCACAACAACATCAGAGA...CTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACATCGCTGAGTGCTCACTaGATGCTGGCTGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: AHHMLQVPRRGETAPLSTSLSAH*MLAVCT
Trigger: AGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGA...TGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR GCA 90 bp GCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCTCCTCATCTGCAGCTaGGGGATTGGCTTATCTCTC +
Preference number: 4 (lower is better)
Translates to: AGLGSFCDLASFAFLKLSLLICS*GIGLSL
Trigger: GAGAGATAAGCCAATCCCGCAGCTGCAGATGAGGAG...AGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp TTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGCTCCTCATCTGCAGCTaGGGGATTGGCTTATCTCTC +
Preference number: 4 (lower is better)
Translates to: LQVPRRGETAPLSTKTTTLLICS*GIGLSL
Trigger: GAGAGATAAGCCAATCCCGCAGCTGCAGATGAGGAG...CGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR GCA 90 bp GGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGTCAGAACTCCTCATCTaGAGCTGCGGGATTGGCTTA +
Preference number: 4 (lower is better)
Translates to: GETAPLSTKTTTEGRLLMSELLI*SCGIGL
Trigger: TAAGCCAATCCCGCAGCTGCAGATGAGGAGTTCTGA...CATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR GCA 90 bp CCTAGGTCCAGTCTAGACTCCAGGGACCTCCAGGCCAGCCCAAGGCTCTTTGAACTATCACACCTGAGGTaGAGGGTTAACTCTTACTTT +
Preference number: 4 (lower is better)
Translates to: PRSSLDSRDLQASPRLFELSHLR*RVNSYF
Trigger: AAAGTAAGAGTTAACCCTGCACCTCAGGTGTGATAG...TTCAAAGAGCCTTGGGCTGGCCTGGAGGTCCCTGGAGTCTAGACTGGACCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp TTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGGACACGGGGGCTCCCTaGCCTGGGCCTGGATGTACT +
Preference number: 4 (lower is better)
Translates to: FLKLSQQMVKSNLECSAGDTGAP*PGPGCT
Trigger: AGTACATCCAGGCCCAGGCCAGGGAGCCCCCGTGTC...CCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp CAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTCTGGAAGTACACAGTaGCGCTGGATTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QQAAHHMLQVPRRGETAPSGSTQ*RWIFPS
Trigger: TGAAGGAAAAATCCAGCGCCACTGTGTACTTCCAGA...AGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGTTGTCACACATCTCCTaGAAGAGCTTCACACCTCCC +
Preference number: 4 (lower is better)
Translates to: YRCPGEEKLHLCQQRRPRLSHIS*KSFTPP
Trigger: GGGAGGTGTGAAGCTCTTCCAGGAGATGTGTGACAA...CCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR CCA 90 bp CAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACAACAATTGTCACACATCTCCTaGAAGAGCTTCACACCTCCC +
Preference number: 4 (lower is better)
Translates to: QPGPVILTSSQPSAVKQQLSHIS*KSFTPP
Trigger: GGGAGGTGTGAAGCTCTTCCAGGAGATGTGTGACAA...TTGTTGTTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACAACAAGGTCAGGGCTaGGTTCAGAAAGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: WKAGLGSFCDLASFAFLKQQGQG*VQKAIR
Trigger: CCTGATGGCTTTCTGAACCCAGCCCTGACCTTGTTG...TTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAAGAACAGAAATTTATTTaGCTCATGGTTCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RALCSRPSTAKAELPRQKEQKFI*LMVLGA
Trigger: AGCCCCCAGAACCATGAGCCAAATAAATTTCTGTTC...TTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp TGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGCACTTAGCTGGTAAATaGCAGAGCCCATGTACTTTC +
Preference number: 4 (lower is better)
Translates to: CTFVNKDDHGGETADGGWHLAGK*QSPCTF
Trigger: GAAAGTACATGGGCTCTGCCATTTACCAGCTAAGTG...CCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp GTCAGAGGCCACCAGGAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGGTACTGAGGGAGAAATaGATTATTAGTCCTCATTTC +
Preference number: 4 (lower is better)
Translates to: VRGHQEEELCALVPPQRRVLREK*IISPHF
Trigger: GAAATGAGGACTAATAATCCATTTCTCCCTCAGTAC...CCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTCCTGGTGGCCTCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTTCTTGGAACACTGTCTaGAGAACGAGCCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KLGLGASVTWQALPSLNFSWNTV*RTSRGC
Trigger: GCAGCCTCGGCTCGTTCTCCAGACAGTGTTCCAAGA...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGCTGGAAGTGGCTTCTTaGAACACTGTCTGGAGAACG +
Preference number: 4 (lower is better)
Translates to: YRCPGEEKLHLCQQRRPRLEVAS*NTVWRT
Trigger: CGTTCTCCAGACAGTGTTCCAAGAAGCCACTTCCAG...CCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp AATTTGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCCCAACGCTTCCTCGCTaGAAGTGGCTTCTTGGAACA +
Preference number: 4 (lower is better)
Translates to: NLECSAGPSHSNLISAVSPTLPR*KWLLGT
Trigger: TGTTCCAAGAAGCCACTTCCAGCGAGGAAGCGTTGG...GCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACCAACGCTTCCTCGCTaGAAGTGGCTTCTTGGAACA +
Preference number: 4 (lower is better)
Translates to: NVQPGPVILTSSQPSAVKPTLPR*KWLLGT
Trigger: TGTTCCAAGAAGCCACTTCCAGCGAGGAAGCGTTGG...TTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGGCCCAAGGATACCCTAGTATTAGCCTTTCCTAAGAGGAGGAGTTTCCCCAACCTCCCTGGAACCTTCTaGAATGTGCTGCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: GPKDTLVLAFPKRRSFPNLPGTF*NVLHRS
Trigger: TGACCTGTGCAGCACATTCCAGAAGGTTCCAGGGAG...GTTGGGGAAACTCCTCCTCTTAGGAAAGGCTAATACTAGGGTATCCTTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTAACAGGAGAAGGATGTaGAGTTGGCACCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: KLGLGASVTWQALPSLNFNRRRM*SWHLLP
Trigger: GGGGAGCAGGTGCCAACTCCACATCCTTCTCCTGTT...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp GCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACACGGATGGAAATGTTCTaGCTAGTCCGGGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: AHHMLQVPRRGETAPLSTRMEMF*LVRVMQ
Trigger: CTGCATCACCCGGACTAGCCAGAACATTTCCATCCG...TGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522648.5
CDS-3UTR TCA 90 bp GAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAACACCTGAAGGAATGTTaGAGGTACTGCAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ECSAGPSHSNLISAVSCEHLKEC*RYCKLF
Trigger: GAAGAGCTTGCAGTACCTTCAACATTCCTTCAGGTG...TTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGGCATTACAGATCCTCTaGTTGGTTCCTGAATATGCA +
Preference number: 4 (lower is better)
Translates to: DSAHRLGPQAGRGGFQLEALQIL*LVPEYA
Trigger: TGCATATTCAGGAACCAATCAGAGGATCTGTAATGC...CTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR TCA 90 bp AGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGAGTCAGTGTTGGCGCTaGGAAACTGCACAAAATGGT +
Preference number: 4 (lower is better)
Translates to: RGETAPLSTKTTTEGRLLSQCWR*ETAQNG
Trigger: ACCATTTTGTGCAGTTTCTCAGCGCCAACACTGACT...CAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR TCA 90 bp TTCCTAAGAGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACCCCCACTATCACACCTaGGGTGCAGGGTTAACTCTT +
Preference number: 4 (lower is better)
Translates to: FLRGGVSPTLPKHPECSHPHYHT*GAGLTL
Trigger: AAGAGTTAACCCTGCACCTCAGGTGTGATAGTGGGG...GTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCTCTTAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp TGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAAGGCCAGCGAATTTCCTaGCTGACTTGGCACAGTATA +
Preference number: 4 (lower is better)
Translates to: WKAGLGSFCDLASFAFLKGQRIS*LTWHSI
Trigger: TATACTGTGCCAAGTCAGGCAGGAAATTCGCTGGCC...TTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAGCTGCTCTAACAGGATaGCACAGACTGGGTGATTTA +
Preference number: 4 (lower is better)
Translates to: ECSAGPSHSNLISAVSCEAALTG*HRLGDL
Trigger: TAAATCACCCAGTCTGTGGCATCCTGTTAGAGCAGC...TTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGGCTGCTCTAACAGGATaGCACAGACTGGGTGATTTA +
Preference number: 4 (lower is better)
Translates to: RGETAPLSTKTTTEGRLLAALTG*HRLGDL
Trigger: TAAATCACCCAGTCTGTGGCATCCTGTTAGAGCAGC...CAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR GCA 90 bp GAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAATTGGGCTGCATTTCCTaGTTCTTACGGAGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: ECSAGPSHSNLISAVSCELGCIS*FLRSFG
Trigger: CCCAAAACTCCGTAAGAAGCAGGAAATGCAGCCCAA...TTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCAAACTCCTCAGCTAGCTaGATCCCTGGTGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSNSSAS*IPGGYS
Trigger: GCTGTAGCCACCAGGGATGCAGCTAGCTGAGGAGTT...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp TTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGCAGCTCCTCCAGATGTaGGAAGCAAATGGAACACAC +
Preference number: 4 (lower is better)
Translates to: LQVPRRGETAPLSTKTTTQLLQM*EANGTH
Trigger: GTGTGTTCCATTTGCTTCCCACATCTGGAGGAGCTG...CGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGAGTACACAGTGGCGCTaGATTTTTCCTTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: RGETAPLSTKTTTEGRLLSTQWR*IFPSGR
Trigger: CCTACCTGAAGGAAAAATCCAGCGCCACTGTGTACT...CAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTACACCCCACGCTTGTTaGCTGCCTCTAGAATGTCAC +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLTPHAC*LPLECH
Trigger: GTGACATTCTAGAGGCAGCCAACAAGCGTGGGGTGT...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAATTTCCTGCCTGACTTaGCACAGTATATCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GFCSSLRTPGWQRRVSTGISCLT*HSISLL
Trigger: AAGGAGAGATATACTGTGCCAAGTCAGGCAGGAAAT...TCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAAAACTTCTCCCGGATTTaGCCAGCGAATTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: WKAGLGSFCDLASFAFLKNFSRI*PANFLP
Trigger: AGGCAGGAAATTCGCTGGCCAAATCCGGGAGAAGTT...TTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGCTTAGGACCCCAGGCTaGCAGAGGAGGGTTTCAACT +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVLRTPG*QRRVST
Trigger: AGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAG...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAACTACATATCCATTGTaGGTTGGTGGGGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: AHHMLQVPRRGETAPLSTTTYPL*VGGVGV
Trigger: CACTCCCACCCCACCAACCCACAATGGATATGTAGT...TGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCTGGAAGTGGCTTCTTaGAACACTGTCTGGAGAACG +
Preference number: 4 (lower is better)
Translates to: AGLGSFCDLASFAFLKLSLEVAS*NTVWRT
Trigger: CGTTCTCCAGACAGTGTTCCAAGAAGCCACTTCCAG...AGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AATTTGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCCTTCCTCGCTGGAAGTaGCTTCTTGGAACACTGTCT +
Preference number: 4 (lower is better)
Translates to: NLECSAGPSHSNLISAVSLPRWK*LLGTLS
Trigger: AGACAGTGTTCCAAGAAGCCACTTCCAGCGAGGAAG...GCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TTCCTAAGAGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACGCCCCGGATGATCTCTaGAAGACAGGGACTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FLRGGVSPTLPKHPECSHAPDDL*KTGTLF
Trigger: AAACAGAGTCCCTGTCTTCCAGAGATCATCCGGGGC...GTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCTCTTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAAGGCTACAGCTTCAGATaGCTCCCCCATACAACTCAT +
Preference number: 4 (lower is better)
Translates to: NVQPGPVILTSSQPSAVKGYSFR*LPHTTH
Trigger: ATGAGTTGTATGGGGGAGCCATCTGAAGCTGTAGCC...TTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AATTTGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCCCATATTGGTCAGGCTaGTCTCGAGACCAGGTAATC +
Preference number: 4 (lower is better)
Translates to: NLECSAGPSHSNLISAVSPYWSG*SRDQVI
Trigger: GATTACCTGGTCTCGAGACCAGCCTGACCAATATGG...GCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTTGCCCCAGATCATGCTaGGAGCAGTGGAGAATTGGA +
Preference number: 4 (lower is better)
Translates to: KLGLGASVTWQALPSLNFCPRSC*EQWRIG
Trigger: TCCAATTCTCCACTGCTCCCAGCATGATCTGGGGCA...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp CAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACAACAAGGATGGAAATGTTCTTaGGGTGACTGTCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: QPGPVILTSSQPSAVKQQGWKCS*GDCQRS
Trigger: AGATCTCTGACAGTCACCTCAAGAACATTTCCATCC...TTGTTGTTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp TACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGGGATGGAAATGTTCTTaGGGTGACTGTCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: YRCPGEEKLHLCQQRRPRGWKCS*GDCQRS
Trigger: AGATCTCTGACAGTCACCTCAAGAACATTTCCATCC...CCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR TCA 90 bp CCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCTCAGTCTTTCAGCGAATTTCCTGCCTaGCTTGGCACAGTATATCTC +
Preference number: 4 (lower is better)
Translates to: PQLSRNIQNVPTPSPQSFSEFPA*LGTVYL
Trigger: GAGATATACTGTGCCAAGTCAGGCAGGAAATTCGCT...GAAAGACTGAGGAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp TTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGAGCGAATTTCCTGCCTaGCTTGGCACAGTATATCTC +
Preference number: 4 (lower is better)
Translates to: LQVPRRGETAPLSTKTTTSEFPA*LGTVYL
Trigger: GAGATATACTGTGCCAAGTCAGGCAGGAAATTCGCT...CGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAAGAGAAGTCCTCACCTaGAGGAATGTTGAAGGTACT +
Preference number: 4 (lower is better)
Translates to: ECSAGPSHSNLISAVSCEREVLT*RNVEGT
Trigger: AGTACCTTCAACATTCCTTCAGGTGAGGACTTCTCT...TTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp GCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAATCCCTGAGACAGAGGTaGGTATCCTGTAGGGACCAT +
Preference number: 4 (lower is better)
Translates to: ASHVTGAQERRNCTFVNKSLRQR*VSCRDH
Trigger: ATGGTCCCTACAGGATACTCACCTCTGTCTCAGGGA...TTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR TCA 90 bp AGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCGATTTACCGCTGTCCTaGGCAATGCTTCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: RRSFPNSPETSRMFPHLLDLPLS*AMLLRT
Trigger: AGTTCTGAGAAGCATTGCTCAGGACAGCGGTAAATC...GAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp TTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCTGAGGCCCAGCTGTaGAGTAGGGCCGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: FAFLKLSQQMVKSNLECSAEAQL*SRAGSL
Trigger: CAGCGAGCCGGCCCTACTGCACAGCTGGGCCTCAGC...TGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAAGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTGGCCAGCGAATTTCCTaGCTGACTTGGCACAGTATA +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLGQRIS*LTWHSI
Trigger: TATACTGTGCCAAGTCAGGCAGGAAATTCGCTGGCC...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp CAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACAACAACAGGAGAGGAGAAACTaGACCTTTGTCAACAAAGAC +
Preference number: 4 (lower is better)
Translates to: QPGPVILTSSQPSAVKQQQERRN*TFVNKD
Trigger: GTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTG...TTGTTGTTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR GCA 90 bp ACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTCAAAAGGTCAAGTTACTTaGCCAAGATCACTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: TFVNKDDHGGETADGGWSKGQVT*PRSLSW
Trigger: CCAGCTAAGTGATCTTGGGCAAGTAACTTGACCTTT...TGACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR GCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTGTCATTGTCGTGTTTaGAGAGACCGCAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLCHCRV*RDRRGS
Trigger: GGAACCTCTGCGGTCTCTGCAAACACGACAATGACA...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATAGCTCCTTTCTCCCATaGCCTCTCAAGTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: RRNCTFVNKDDHGGETADSSFLP*PLKCLS
Trigger: TGACAAACACTTGAGAGGGCATGGGAGAAAGGAGCT...ATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR GCA 90 bp GGGCCCAAGGATACCCTAGTATTAGCCTTTCCTAAGAGGAGGAGTTTCCCCAACTTGCTTTGTTGCCCATaGTGGAGTGCAGTGATGCAA +
Preference number: 4 (lower is better)
Translates to: GPKDTLVLAFPKRRSFPNLLCCP*WSAVMQ
Trigger: TTGCATCACTGCACTCCAGCATGGGCAACAAAGCAA...GTTGGGGAAACTCCTCCTCTTAGGAAAGGCTAATACTAGGGTATCCTTGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTAGATGCCCCAGATCATaGTGGGAGCAGTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLRCPRS*WEQWRI
Trigger: AATTCTCCACTGCTCCCAGCATGATCTGGGGCATCT...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCAAACCAGAAGCCAAGATaGCCCAGATCATGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSNQKPR*PRSCWE
Trigger: CTCCCAGCATGATCTGGGGCATCTTGGCTTCTGGTT...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGACACCCCACGCTTGTTaGCTGCCTCTAGAATGTCAC +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVTPHAC*LPLECH
Trigger: GTGACATTCTAGAGGCAGCCAACAAGCGTGGGGTGT...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTATTTCCTGCCTGACTTaGCACAGTATATCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SRQRITCYRCPGEEKLHLISCLT*HSISLL
Trigger: AAGGAGAGATATACTGTGCCAAGTCAGGCAGGAAAT...AAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGGCCCAAGGATACCCTAGTATTAGCCTTTCCTAAGAGGAGGAGTTTCCCCAACATGTTCATTCCAGCATaGCTTCTCCCATACTTGGCC +
Preference number: 4 (lower is better)
Translates to: GPKDTLVLAFPKRRSFPNMFIPA*LLPYLA
Trigger: GGCCAAGTATGGGAGAAGCCATGCTGGAATGAACAT...GTTGGGGAAACTCCTCCTCTTAGGAAAGGCTAATACTAGGGTATCCTTGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp TGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAAATGTTCATTCCAGCATaGCTTCTCCCATACTTGGCC +
Preference number: 4 (lower is better)
Translates to: WKAGLGSFCDLASFAFLKMFIPA*LLPYLA
Trigger: GGCCAAGTATGGGAGAAGCCATGCTGGAATGAACAT...TTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCTCAGTCGTAATCCAACCACCTTaGCATCCCAAAGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VSPTLPKHPECSHTFSSVVIQPP*HPKVLG
Trigger: TCCCAGAACTTTGGGATGCCAAGGTGGTTGGATTAC...GACTGAGGAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR TCA 90 bp GCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTGAAATGTTCTTGAGGTaGCTGTCAGAGATCTGGACT +
Preference number: 4 (lower is better)
Translates to: AGLGSFCDLASFAFLKLSEMFLR*LSEIWT
Trigger: AGTCCAGATCTCTGACAGTCACCTCAAGAACATTTC...AGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACACAGGAGAGGAGAAACTaGACCTTTGTCAACAAAGAC +
Preference number: 4 (lower is better)
Translates to: AHHMLQVPRRGETAPLSTQERRN*TFVNKD
Trigger: GTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTG...TGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GATCACATACCACTGACCCCACTATCACACCTGAGGTGCAGGGTTAACTCTTACAGACCTTCTGCACTGTaGATCCCATACTGTATGGCA +
Preference number: 4 (lower is better)
Translates to: DHIPLTPLSHLRCRVNSYRPSAL*IPYCMA
Trigger: TGCCATACAGTATGGGATGCACAGTGCAGAAGGTCT...GTAAGAGTTAACCCTGCACCTCAGGTGTGATAGTGGGGTCAGTGGTATGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTAGACCTTCTGCACTGTaGATCCCATACTGTATGGCA +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLRPSAL*IPYCMA
Trigger: TGCCATACAGTATGGGATGCACAGTGCAGAAGGTCT...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTTTGGCGCTGAGAAACTaGACAAAATGGTCCCACATG +
Preference number: 4 (lower is better)
Translates to: KLGLGASVTWQALPSLNFLALRN*TKWSHM
Trigger: CATGTGGGACCATTTTGTGCAGTTTCTCAGCGCCAA...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp CTTTCTAAGCATCCTATATTTCTTTGCACTCAGCTAGGCTGTGCCCTCAGGACCCGCTGTCCTGAGCAATaGTTCTCAGAACTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LSKHPIFLCTQLGCALRTRCPEQ*FSELLI
Trigger: GATGAGGAGTTCTGAGAAGCATTGCTCAGGACAGCG...GGTCCTGAGGGCACAGCCTAGCTGAGTGCAAAGAAATATAGGATGCTTAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGCGCTGTCCTGAGCAATaGTTCTCAGAACTCCTCATC +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVRCPEQ*FSELLI
Trigger: GATGAGGAGTTCTGAGAAGCATTGCTCAGGACAGCG...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGATTTTGTCCTCTAGCTaGCCCACAACCTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVILSSS*PTTSLE
Trigger: TTCCAGGGAGGTTGTGGGGCAGCTAGAGGACAAAAT...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp CCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCTCAGTCTTTCCTGGCCCCTCCTGTATaGTTTCTAAGCATCCTATAT +
Preference number: 4 (lower is better)
Translates to: PQLSRNIQNVPTPSPQSFLAPPV*FLSILY
Trigger: ATATAGGATGCTTAGAAAGCATACAGGAGGGGCCAG...GAAAGACTGAGGAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp TTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGACACGGGGGCTCCCTaGCCTGGGCCTGGATGTACT +
Preference number: 4 (lower is better)
Translates to: FAFLKLSQQMVKSNLECSDTGAP*PGPGCT
Trigger: AGTACATCCAGGCCCAGGCCAGGGAGCCCCCGTGTC...TGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAAGGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp ATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCAGTACACAGTGGCGCTaGATTTTTCCTTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: MLQVPRRGETAPLSTKTTSTQWR*IFPSGR
Trigger: CCTACCTGAAGGAAAAATCCAGCGCCACTGTGTACT...GGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCTCTGGAAGTACACAGTaGCGCTGGATTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RRSFPNSPETSRMFPHLLSGSTQ*RWIFPS
Trigger: TGAAGGAAAAATCCAGCGCCACTGTGTACTTCCAGA...GAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAATCTGGAAGTACACAGTaGCGCTGGATTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: NVQPGPVILTSSQPSAVKSGSTQ*RWIFPS
Trigger: TGAAGGAAAAATCCAGCGCCACTGTGTACTTCCAGA...TTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATTTCCTGCCTGACTTaGCACAGTATATCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RGETAPLSTKTTTEGRLLISCLT*HSISLL
Trigger: AAGGAGAGATATACTGTGCCAAGTCAGGCAGGAAAT...CAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGTTCTATGTGGCAACCTaGACCCAGGCTCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVFYVAT*TQALKA
Trigger: AGCTTTGAGAGCCTGGGTCCAGGTTGCCACATAGAA...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAACAGAAATTTATTTaGCTCATGGTTCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GETAPLSTKTTTEGRLLMEQKFI*LMVLGA
Trigger: AGCCCCCAGAACCATGAGCCAAATAAATTTCTGTTC...CATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp GCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAAGTAGGTGGGTATTCTaGGGTTCTCCTTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: ASHVTGAQERRNCTFVNKSRWVF*GSPFTW
Trigger: CCAGGTGAAAGGAGAACCCCAGAATACCCACCTACT...TTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGCTTCCTCGCTGGAAGTaGCTTCTTGGAACACTGTCT +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVLPRWK*LLGTLS
Trigger: AGACAGTGTTCCAAGAAGCCACTTCCAGCGAGGAAG...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCAATAGGATTCTGCCAGTaGGCTGGGAACTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSIGFCQ*AGNCSV
Trigger: AACAGAACAGTTCCCAGCTCACTGGCAGAATCCTAT...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp CAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACAACAATCTTGGTTGAATAAATaGTTGAGTGTCTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: QPGPVILTSSQPSAVKQQSWLNK*LSVSLR
Trigger: TCTCAGGGAGACACTCAAGCATTTATTCAACCAAGA...TTGTTGTTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp TTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGTTGGCCATCGCTGAGTaGTCACTGCATGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FLKLSQQMVKSNLECSAGLAIAE*SLHAGC
Trigger: ACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAA...CCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp GATCACATACCACTGACCCCACTATCACACCTGAGGTGCAGGGTTAACTCTTACCATCCTATATTTCTTTaGACTCAGCTAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: DHIPLTPLSHLRCRVNSYHPIFL*TQLGCA
Trigger: GGCACAGCCTAGCTGAGTGCAAAGAAATATAGGATG...GTAAGAGTTAACCCTGCACCTCAGGTGTGATAGTGGGGTCAGTGGTATGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAGTACACAGTGGCGCTaGATTTTTCCTTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVSTQWR*IFPSGR
Trigger: CCTACCTGAAGGAAAAATCCAGCGCCACTGTGTACT...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AATTTGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCATTTCCTGCCTGACTTaGCACAGTATATCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: NLECSAGPSHSNLISAVSISCLT*HSISLL
Trigger: AAGGAGAGATATACTGTGCCAAGTCAGGCAGGAAAT...GCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAGCATCCCATACTGTATaGCAGAAGAAAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: AHHMLQVPRRGETAPLSTASHTV*QKKERE
Trigger: TTCTCTCTCTTTCTTCTGCCATACAGTATGGGATGC...TGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp AGGAGGAGTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCAATTTATTTGGCTCATaGTTCTGGGGGCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: RRSFPNSPETSRMFPHLLNLFGS*FWGLRS
Trigger: ACTTCTCAGCCCCCAGAACCATGAGCCAAATAAATT...GAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAACTCCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CCA 90 bp ATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCCTCATCCTCCTTCCCTaGCAGACATTACTAGTTGAT +
Preference number: 4 (lower is better)
Translates to: MLQVPRRGETAPLSTKTTLILLP*QTLLVD
Trigger: ATCAACTAGTAATGTCTGCCAGGGAAGGAGGATGAG...GGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR TCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGGAAATGTTCTTGAGGTaGCTGTCAGAGATCTGGACT +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVEMFLR*LSEIWT
Trigger: AGTCCAGATCTCTGACAGTCACCTCAAGAACATTTC...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCAGGATGGAAATGTTCTTaGGGTGACTGTCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSGWKCS*GDCQRS
Trigger: AGATCTCTGACAGTCACCTCAAGAACATTTCCATCC...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTCAAGCTTCCAACACATaGACTTTAGGAGACACATTC +
Preference number: 4 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLQASNT*TLGDTF
Trigger: GAATGTGTCTCCTAAAGTTCATGTGTTGGAAGCTTG...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp CTTTCTAAGCATCCTATATTTCTTTGCACTCAGCTAGGCTGTGCCCTCAGGACCAATCCTGTAGAACAGTaGGCAAACACACCGTACATG +
Preference number: 4 (lower is better)
Translates to: LSKHPIFLCTQLGCALRTNPVEQ*ANTPYM
Trigger: CATGTACGGTGTGTTTGCTCACTGTTCTACAGGATT...GGTCCTGAGGGCACAGCCTAGCTGAGTGCAAAGAAATATAGGATGCTTAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp ATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCTTAGTCCATTTATGCTaGTCTAACAGGATGCCACAG +
Preference number: 4 (lower is better)
Translates to: MLQVPRRGETAPLSTKTTLVHLC*SNRMPQ
Trigger: CTGTGGCATCCTGTTAGAGCAGCATAAATGGACTAA...GGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CCA 90 bp TTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCATGGGCCTGGATGTACTaGGCCTCCACCGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: FAFLKLSQQMVKSNLECSWAWMY*ASTEDK
Trigger: CTTGTCCTCGGTGGAGGCCCAGTACATCCAGGCCCA...TGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAAGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp GCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAATCTGGAAGTACACAGTaGCGCTGGATTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ASHVTGAQERRNCTFVNKSGSTQ*RWIFPS
Trigger: TGAAGGAAAAATCCAGCGCCACTGTGTACTTCCAGA...TTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAATCTCATGAATACATaGGGGCAGAATACTCATGGC +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVNLMNT*GQNTHG
Trigger: GCCATGAGTATTCTGCCCTCATGTATTCATGAGATT...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCATTAGTCCATTTATGCTaGTCTAACAGGATGCCACAG +
Preference number: 4 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSLVHLC*SNRMPQ
Trigger: CTGTGGCATCCTGTTAGAGCAGCATAAATGGACTAA...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTGTGCCTCGATTCCCATaGTGTTTCAAAGATAAGAAT +
Preference number: 4 (lower is better)
Translates to: KLGLGASVTWQALPSLNFVPRFP*CFKDKN
Trigger: ATTCTTATCTTTGAAACAGCATGGGAATCGAGGCAC...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGATTCTGCCAGTGAGCTaGGAACTGTTCTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: FLKLSQQMVKSNLECSAGILPVS*ELFCCH
Trigger: GTGGCAACAGAACAGTTCCCAGCTCACTGGCAGAAT...CCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGAGTAGGTGGGTATTCTaGGGTTCTCCTTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: FLKLSQQMVKSNLECSAGSRWVF*GSPFTW
Trigger: CCAGGTGAAAGGAGAACCCCAGAATACCCACCTACT...CCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAAGTACTGAGGGAGAAATaGATTATTAGTCCTCATTTC +
Preference number: 4 (lower is better)
Translates to: WKAGLGSFCDLASFAFLKVLREK*IISPHF
Trigger: GAAATGAGGACTAATAATCCATTTCTCCCTCAGTAC...TTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CCA 90 bp AATTTGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCCTTCTTACGGAGTTTTaGGGGCCATTAATATTAAAG +
Preference number: 4 (lower is better)
Translates to: NLECSAGPSHSNLISAVSLLTEF*GPLILK
Trigger: CTTTAATATTAATGGCCCCCAAAACTCCGTAAGAAG...GCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGGTGCCTCGATTCCCATaGTGTTTCAAAGATAAGAAT +
Preference number: 4 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVVPRFP*CFKDKN
Trigger: ATTCTTATCTTTGAAACAGCATGGGAATCGAGGCAC...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
3UTR CAA 72 bp TTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTaGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTC +
Preference number: 4 (lower is better)
Translates to: FLKLSQQMVKSN*ECSAGPSHSNL
Trigger: GAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR TCA 90 bp TTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCATCCCTGAGACAGAGGTaGGTATCCTGTAGGGACCAT +
Preference number: 4 (lower is better)
Translates to: FAFLKLSQQMVKSNLECSSLRQR*VSCRDH
Trigger: ATGGTCCCTACAGGATACTCACCTCTGTCTCAGGGA...TGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAAGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR TCA 90 bp TTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGGGGCCTGGGAACATTaGACCATGGCAGTGATTTTG +
Preference number: 4 (lower is better)
Translates to: FAFLKLSQQMVKSNLECSGAWEH*TMAVIL
Trigger: CAAAATCACTGCCATGGTTCAATGTTCCCAGGCCCC...TGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR GCA 90 bp TTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCATCAGAACTCCTCATCTaGAGCTGCGGGATTGGCTTA +
Preference number: 4 (lower is better)
Translates to: FAFLKLSQQMVKSNLECSSELLI*SCGIGL
Trigger: TAAGCCAATCCCGCAGCTGCAGATGAGGAGTTCTGA...TGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAAGGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR GCA 90 bp TTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCATCTCTGATGTTGTTGTaGTTGACGGTCTGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: FAFLKLSQQMVKSNLECSSLMLL*LTVWKY
Trigger: GTACTTCCAGACCGTCAAGCACAACAACATCAGAGA...TGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAAGGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CCA 90 bp TTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAAATTTATTTGGCTCATaGTTCTGGGGGCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FAFLKLSQQMVKSNLECSNLFGS*FWGLRS
Trigger: ACTTCTCAGCCCCCAGAACCATGAGCCAAATAAATT...TGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAAGGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CCA 90 bp GGGCTACAGGGCCCTGAAGACGCGGACACACTTCGGGTACCGGGGTaGCTGCCTGCCGAGCGGCCGCTGAAGGGGTTGGAGGACGTGCGG +
Preference number: 5 (lower is better)
Translates to: GLQGPEDADTLRVPG*LPAERPLKGLEDVR
Trigger: CCGCACGTCCTCCAACCCCTTCAGCGGCCGCTCGGCAGGCAGCCACCCCGGTACCCGAAGTGTGTCCGCGTCTTCAGGGCCCTGTAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS GCA 90 bp ACACACCACGGAGGAGTGGGGCTCCCGCACCCCCGGGAGGCCGCCTaGTCCCAGGACCGGCGTGCAGGGCACCTCCAAGAAGTGATTTAC +
Preference number: 5 (lower is better)
Translates to: THHGGVGLPHPREAA*SQDRRAGHLQEVIY
Trigger: GTAAATCACTTCTTGGAGGTGCCCTGCACGCCGGTCCTGGGAGCAGGCGGCCTCCCGGGGGTGCGGGAGCCCCACTCCTCCGTGGTGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp CGGGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCTGCTAAGGCGGCCATaGGCCGGGGCTGCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: RGSPDLTSQQAAHHMLQVLLRRP*AGAAPG
Trigger: GCCCGGAGCAGCCCCGGCCAATGGCCGCCTTAGCAG...CACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS GCA 90 bp TTGCCCAGGTGCCTTGACCGGCTCATGCCTCCCGTCCCTGGGTGGTaGTGGGGGAGGCTGGCACGTCAGCTCCTCCAGATGTGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: LPRCLDRLMPPVPGW*WGRLARQLLQMWEA
Trigger: TGCTTCCCACATCTGGAGGAGCTGACGTGCCAGCCTCCCCCAGCACCACCCAGGGACGGGAGGCATGAGCCGGTCAAGGCACCTGGGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS GCA 90 bp CATCTGCAGCTGCGGGATTGGCTTATCTCTCAGGGCCACCTGCCCTaGCCTCGGGCCGGGAGGGCTGGCTCAGACACCTCCTTGGCACAG +
Preference number: 5 (lower is better)
Translates to: HLQLRDWLISQGHLP*PRAGRAGSDTSLAQ
Trigger: CTGTGCCAAGGAGGTGTCTGAGCCAGCCCTCCCGGCCCGAGGGCAGGGCAGGTGGCCCTGAGAGATAAGCCAATCCCGCAGCTGCAGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS GCA 90 bp CTCCTCATCTGCAGCTGCGGGATTGGCTTATCTCTCAGGGCCACCTaGCCTGCCCTCGGGCCGGGAGGGCTGGCTCAGACACCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LLICSCGIGLSLRAT*PALGPGGLAQTPPW
Trigger: CCAAGGAGGTGTCTGAGCCAGCCCTCCCGGCCCGAGGGCAGGGCAGGTGGCCCTGAGAGATAAGCCAATCCCGCAGCTGCAGATGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CCA 90 bp GGACGGGGGCGACCAGCCGCGGGGACTTCAGGCCCATCACAGGCTTaGAGGAGGCGTAGAGGTGGCGGAACTCCTCGTCAAACAGCTCCA +
Preference number: 5 (lower is better)
Translates to: GRGRPAAGTSGPSQA*RRRRGGGTPRQTAP
Trigger: TGGAGCTGTTTGACGAGGAGTTCCGCCACCTCTACGCCTCCTCCAAGCCTGTGATGGGCCTGAAGTCCCCGCGGCTGGTCGCCCCCGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp ATGTGCTGCACAGGTCAAACTAGAGCGGGGAACCCAAGAACTGGTGGGGGCCGGCTGCTAAGGCGGCCATaGGCCGGGGCTGCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: MCCTGQTRAGNPRTGGGRLLRRP*AGAAPG
Trigger: GCCCGGAGCAGCCCCGGCCAATGGCCGCCTTAGCAG...CCGGCCCCCACCAGTTCTTGGGTTCCCCGCTCTAGTTTGACCTGTGCAGCACAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS CCA 90 bp CCCAGGTGCCTTGACCGGCTCATGCCTCCCGTCCCTGGGTGGTGCTaGGGGAGGCTGGCACGTCAGCTCCTCCAGATGTGGGAAGCAAAT +
Preference number: 5 (lower is better)
Translates to: PRCLDRLMPPVPGWC*GRLARQLLQMWEAN
Trigger: ATTTGCTTCCCACATCTGGAGGAGCTGACGTGCCAGCCTCCCCCAGCACCACCCAGGGACGGGAGGCATGAGCCGGTCAAGGCACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CCA 90 bp GACACGGGCCAGGGAGAGCTGTTGACCAGGCGCGCCTCCTCTCCTTaGTCACACCCAAGTGCCCACCCCTCCCTGCCCTATGAAGGAGCT +
Preference number: 5 (lower is better)
Translates to: DTGQGELLTRRASSP*SHPSAHPSLPYEGA
Trigger: AGCTCCTTCATAGGGCAGGGAGGGGTGGGCACTTGGGTGTGACCAAGGAGAGGAGGCGCGCCTGGTCAACAGCTCTCCCTGGCCCGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS TCA 90 bp TTTGTTTACTTTCAGGAACGGGGTGGCTGCCTGCCGAGCGGCCGCTaGAGGGGTTGGAGGACGTGCGGTCACTGGCGGAGCCACTGCTGC +
Preference number: 5 (lower is better)
Translates to: FVYFQERGGCLPSGR*RGWRTCGHWRSHCC
Trigger: GCAGCAGTGGCTCCGCCAGTGACCGCACGTCCTCCAACCCCTTCAGCGGCCGCTCGGCAGGCAGCCACCCCGTTCCTGAAAGTAAACAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS CCA 90 bp ATTTTGCCCAGGTGCCTTGACCGGCTCATGCCTCCCGTCCCTGGGTaGTGCTGGGGGAGGCTGGCACGTCAGCTCCTCCAGATGTGGGAA +
Preference number: 5 (lower is better)
Translates to: ILPRCLDRLMPPVPG*CWGRLARQLLQMWE
Trigger: TTCCCACATCTGGAGGAGCTGACGTGCCAGCCTCCCCCAGCACCACCCAGGGACGGGAGGCATGAGCCGGTCAAGGCACCTGGGCAAAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCTTTTGCCCAGGTGCCTaGACCGGCTCATGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: GQPRPNLPAGSASHVTGAFCPGA*TGSCLP
Trigger: CGGGAGGCATGAGCCGGTCAAGGCACCTGGGCAAAA...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS TCA 90 bp ACTGGGCCTCCACCGAGGACAAGAAGTCCACCTCGCCTTCCTGGCTaGGCACCCGCCAGTAGGCTTCAGAACCCCCATCCAAGAGGGCGT +
Preference number: 5 (lower is better)
Translates to: TGPPPRTRSPPRLPG*APASRLQNPHPRGR
Trigger: ACGCCCTCTTGGATGGGGGTTCTGAAGCCTACTGGCGGGTGCTCAGCCAGGAAGGCGAGGTGGACTTCTTGTCCTCGGTGGAGGCCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS GCA 90 bp CACTGGCTCTTGACATCTTCCAGACGCTTCCGGATTTTGCCCAGGTaGCTTGACCGGCTCATGCCTCCCGTCCCTGGGTGGTGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: HWLLTSSRRFRILPR*LDRLMPPVPGWCWG
Trigger: CCCCCAGCACCACCCAGGGACGGGAGGCATGAGCCGGTCAAGGCACCTGGGCAAAATCCGGAAGCGTCTGGAAGATGTCAAGAGCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS GCA 90 bp CTCTCCTCCCAGCCGCAGGGGGAGGCGAAGGTGAGCCGGCTTTCCTaGTGGGTTTCGCAACTCTCCCTCAGGCCTTTGTTACCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: LSSQPQGEAKVSRLS*WVSQLSLRPLLPSR
Trigger: CCTGCTTGGTAACAAAGGCCTGAGGGAGAGTTGCGAAACCCAGCAGGAAAGCCGGCTCACCTTCGCCTCCCCCTGCGGCTGGGAGGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518448.5
ENST00000520541.5
ENST00000536633.2
CDS CCA 90 bp GGTTCCAGTTCTCAGGCCAACGCTTCCTCGCTGGAAGTGGCTTCTTaGAACACTGTCTGGAGAACGAGCCGAGGCTGCCGGCGGCCCACG +
Preference number: 5 (lower is better)
Translates to: GSSSQANASSLEVAS*NTVWRTSRGCRRPT
Trigger: CGTGGGCCGCCGGCAGCCTCGGCTCGTTCTCCAGACAGTGTTCCAAGAAGCCACTTCCAGCGAGGAAGCGTTGGCCTGAGAACTGGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CCA 90 bp TCCTCCCAGCCGCAGGGGGAGGCGAAGGTGAGCCGGCTTTCCTGCTaGGTTTCGCAACTCTCCCTCAGGCCTTTGTTACCAAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SSQPQGEAKVSRLSC*VSQLSLRPLLPSRE
Trigger: CTCCCTGCTTGGTAACAAAGGCCTGAGGGAGAGTTGCGAAACCCAGCAGGAAAGCCGGCTCACCTTCGCCTCCCCCTGCGGCTGGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518448.5
ENST00000520541.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTCTGCTAAGGCGGCCATaGGCCGGGGCTGCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: SRQRITCYRCPGEEKLHLLLRRP*AGAAPG
Trigger: GCCCGGAGCAGCCCCGGCCAATGGCCGCCTTAGCAG...AAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCGGCTCAGACACCTCCTaGGCACAGTCAGCCATGGGA +
Preference number: 5 (lower is better)
Translates to: EEELCALVPPQRRLSFPAGSDTS*AQSAMG
Trigger: TCCCATGGCTGACTGTGCCAAGGAGGTGTCTGAGCC...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp GGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCGGCTCAGACACCTCCTaGGCACAGTCAGCCATGGGA +
Preference number: 5 (lower is better)
Translates to: GQPRPNLPAGSASHVTGAGSDTS*AQSAMG
Trigger: TCCCATGGCTGACTGTGCCAAGGAGGTGTCTGAGCC...GGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS TCA 90 bp AGAGGTGGCGGAACTCCTCGTCAAACAGCTCCACCGCCTGGCCTGTaGACTTGGAGAGGATGTTCCGGTGCACGTGTCCGCAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: RGGGTPRQTAPPPGL*TWRGCSGARVRRAR
Trigger: CCTGGCTCTGCGGACACGTGCACCGGAACATCCTCTCCAAGTTCACAGGCCAGGCGGTGGAGCTGTTTGACGAGGAGTTCCGCCACCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS TCA 90 bp CCATGGGATATTTCCTCTCCTCCCAGCCGCAGGGGGAGGCGAAGGTaGGCCGGCTTTCCTGCTGGGTTTCGCAACTCTCCCTCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: PWDISSPPSRRGRRR*AGFPAGFRNSPSGL
Trigger: AAGGCCTGAGGGAGAGTTGCGAAACCCAGCAGGAAAGCCGGCTCACCTTCGCCTCCCCCTGCGGCTGGGAGGAGAGGAAATATCCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518448.5
ENST00000520541.5
ENST00000536633.2
CDS CCA 90 bp CGTGGCCAGCCGGGCACTCTCGTTGTCACTAAAGTCAGCCCTGGCTaGCCGGACCCACTGGCTCTTGACATCTTCCAGACGCTTCCGGAT +
Preference number: 5 (lower is better)
Translates to: RGQPGTLVVTKVSPG*PDPLALDIFQTLPD
Trigger: ATCCGGAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCCGGCCAGCCAGGGCTGACTTTAGTGACAACGAGAGTGCCCGGCTGGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp CGGGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCGGACCCACTGGCTCTaGACATCTTCCAGACGCTTC +
Preference number: 5 (lower is better)
Translates to: RGSPDLTSQQAAHHMLQVRTHWL*TSSRRF
Trigger: GAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCCG...CACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GCCTTTGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCCGGCCGCTGAAGGGGTaGGAGGACGTGCGGTCACTG +
Preference number: 5 (lower is better)
Translates to: AFGKLGLGASVTWQALPSRPLKG*EDVRSL
Trigger: CAGTGACCGCACGTCCTCCAACCCCTTCAGCGGCCG...GGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp TTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCGGCCGCTGAAGGGGTaGGAGGACGTGCGGTCACTG +
Preference number: 5 (lower is better)
Translates to: FCSSLRTPGWQRRVSTGERPLKG*EDVRSL
Trigger: CAGTGACCGCACGTCCTCCAACCCCTTCAGCGGCCG...CTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCCTCTCCCTCAGGCCTTaGTTACCAAGCAGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: EEELCALVPPQRRLSFPALSLRP*LPSREP
Trigger: AGGCTCCCTGCTTGGTAACAAAGGCCTGAGGGAGAG...GGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGGAGAAGGATGTGGAGTaGGCACCTGCTCCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGREKDVE*APAPLW
Trigger: CCAGAGGGGAGCAGGTGCCAACTCCACATCCTTCTC...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp TCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCTTTTGCCCAGGTGCCTaGACCGGCTCATGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: SAHRLGPQAGRGGFQLESFCPGA*TGSCLP
Trigger: CGGGAGGCATGAGCCGGTCAAGGCACCTGGGCAAAA...GCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCGAACTTCTCCCGGATTaGGCCAGCGAATTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: GSPDLTSQQAAHHMLQVPELLPD*ASEFPA
Trigger: GGCAGGAAATTCGCTGGCCAAATCCGGGAGAAGTTC...GGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGCGGCCGCTGAAGGGGTaGGAGGACGTGCGGTCACTG +
Preference number: 5 (lower is better)
Translates to: RGETAPLSTKTTTEGRLLRPLKG*EDVRSL
Trigger: CAGTGACCGCACGTCCTCCAACCCCTTCAGCGGCCG...CAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS TCA 90 bp AGGCCGCCTGCTCCCAGGACCGGCGTGCAGGGCACCTCCAAGAAGTaGTTTACCGCTGTCCTGAGCAATGCTTCTCAGAACTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: RPPAPRTGVQGTSKK*FTAVLSNASQNSSS
Trigger: AGATGAGGAGTTCTGAGAAGCATTGCTCAGGACAGCGGTAAATCACTTCTTGGAGGTGCCCTGCACGCCGGTCCTGGGAGCAGGCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CCA 90 bp GCACTCTCGTTGTCACTAAAGTCAGCCCTGGCTGGCCGGACCCACTaGCTCTTGACATCTTCCAGACGCTTCCGGATTTTGCCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: ALSLSLKSALAGRTH*LLTSSRRFRILPRC
Trigger: GCACCTGGGCAAAATCCGGAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCCGGCCAGCCAGGGCTGACTTTAGTGACAACGAGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACGGACCCACTGGCTCTaGACATCTTCCAGACGCTTC +
Preference number: 5 (lower is better)
Translates to: RALCSRPSTAKAELPRQKRTHWL*TSSRRF
Trigger: GAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCCG...TTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGACGAGGTCTCTGATGTaGTTGTGCTTGACGGTCTGG +
Preference number: 5 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGTRSLM*LCLTVW
Trigger: CCAGACCGTCAAGCACAACAACATCAGAGACCTCGT...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp CAGGTTCTCCCCTATCTCCCAGGACTGAGCTCGACACAGGCACAGGCTGAGGCCAACACCCCACGCTTGTaGGCTGCCTCTAGAATGTCA +
Preference number: 5 (lower is better)
Translates to: QVLPYLPGLSSTQAQAEANTPRL*AASRMS
Trigger: TGACATTCTAGAGGCAGCCAACAAGCGTGGGGTGTT...GGCCTCAGCCTGTGCCTGTGTCGAGCTCAGTCCTGGGAGATAGGGGAGAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp CAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTGCCTGGCCTGTGAACTaGGAGAGGATGTTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: QQAAHHMLQVPRRGETAPAWPVN*ERMFRC
Trigger: GCACCGGAACATCCTCTCCAAGTTCACAGGCCAGGC...AGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCAGGCTCCCCAAGGGCCTaGGTGGGGCTGGAACCGGGG +
Preference number: 5 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSGSPRA*VGLEPG
Trigger: CCCCGGTTCCAGCCCCACCAAGGCCCTTGGGGAGCC...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS TCA 90 bp GGACCGGCGTGCAGGGCACCTCCAAGAAGTGATTTACCGCTGTCCTaGGCAATGCTTCTCAGAACTCCTCATCTGCAGCTGCGGGATTGG +
Preference number: 5 (lower is better)
Translates to: GPACRAPPRSDLPLS*AMLLRTPHLQLRDW
Trigger: CCAATCCCGCAGCTGCAGATGAGGAGTTCTGAGAAGCATTGCTCAGGACAGCGGTAAATCACTTCTTGGAGGTGCCCTGCACGCCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAATTTTGCCCAGGTGCCTaGACCGGCTCATGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: ECSAGPSHSNLISAVSCEFCPGA*TGSCLP
Trigger: CGGGAGGCATGAGCCGGTCAAGGCACCTGGGCAAAA...TTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp TTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGAGCCGGGCACTCTCGTaGTCACTAAAGTCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: FCSSLRTPGWQRRVSTGESRALS*SLKSAL
Trigger: CAGGGCTGACTTTAGTGACAACGAGAGTGCCCGGCT...CTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCCGGGCACTCTCGTaGTCACTAAAGTCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: DSAHRLGPQAGRGGFQLESRALS*SLKSAL
Trigger: CAGGGCTGACTTTAGTGACAACGAGAGTGCCCGGCT...CTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GTCAGAGGCCACCAGGAGGAAGAGCTCTGTGCTCTCGTCCCTCCACAGCGAAGGAGGTCTCTGATGTTGTaGTGCTTGACGGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: VRGHQEEELCALVPPQRRRSLML*CLTVWK
Trigger: CTTCCAGACCGTCAAGCACAACAACATCAGAGACCT...CCTTCGCTGTGGAGGGACGAGAGCACAGAGCTCTTCCTCCTGGTGGCCTCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp CACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGCGGCCGCTGAAGGGGTaGGAGGACGTGCGGTCACTG +
Preference number: 5 (lower is better)
Translates to: HMLQVPRRGETAPLSTKTRPLKG*EDVRSL
Trigger: CAGTGACCGCACGTCCTCCAACCCCTTCAGCGGCCG...CGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGCTCTCCCTCAGGCCTTaGTTACCAAGCAGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: DSAHRLGPQAGRGGFQLELSLRP*LPSREP
Trigger: AGGCTCCCTGCTTGGTAACAAAGGCCTGAGGGAGAG...CTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS GCA 90 bp GTGATTTACCGCTGTCCTGAGCAATGCTTCTCAGAACTCCTCATCTaGAGCTGCGGGATTGGCTTATCTCTCAGGGCCACCTGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: VIYRCPEQCFSELLI*SCGIGLSLRATCPA
Trigger: GGCAGGGCAGGTGGCCCTGAGAGATAAGCCAATCCCGCAGCTGCAGATGAGGAGTTCTGAGAAGCATTGCTCAGGACAGCGGTAAATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTCGGACCCACTGGCTCTaGACATCTTCCAGACGCTTC +
Preference number: 5 (lower is better)
Translates to: SRQRITCYRCPGEEKLHLRTHWL*TSSRRF
Trigger: GAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCCG...AAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGCTGATGTTGTTGTGCTaGACGGTCTGGAAGTACACA +
Preference number: 5 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGLMLLC*TVWKYT
Trigger: TGTGTACTTCCAGACCGTCAAGCACAACAACATCAG...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp CGGGGCAGCCCCGACCTAACCTCCCAGCAGGCAGCGCATCACATGTTACAGGTGAATTTCCTGCCTGACTaGGCACAGTATATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: RGSPDLTSQQAAHHMLQVNFLPD*AQYISP
Trigger: AGGAGAGATATACTGTGCCAAGTCAGGCAGGAAATT...CACCTGTAACATGTGATGCGCTGCCTGCTGGGAGGTTAGGTCGGGGCTGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GCCTTTGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTGGCTTCTCCCATACTaGGCCATCGCTGAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: AFGKLGLGASVTWQALPSWLLPY*AIAECS
Trigger: TGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCA...GGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGATGGCTTCTCCCATACTaGGCCATCGCTGAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: GFCSSLRTPGWQRRVSTGWLLPY*AIAECS
Trigger: TGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCA...TCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CAA 90 bp CTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCGCTGGAAGTGGCTTCTaGGAACACTGTCTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: LPAGSASHVTGAQERRNCAGSGF*EHCLEN
Trigger: GTTCTCCAGACAGTGTTCCAAGAAGCCACTTCCAGC...GCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS GCA 90 bp CTAGTCCGGGTGATGCAGCGGCGGACGAGGTCTCTGATGTTGTTGTaGTTGACGGTCTGGAAGTACACAGTGGCGCTGGATTTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LVRVMQRRTRSLMLL*LTVWKYTVALDFSF
Trigger: GAAGGAAAAATCCAGCGCCACTGTGTACTTCCAGACCGTCAAGCACAACAACATCAGAGACCTCGTCCGCCGCTGCATCACCCGGACTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS CCA 90 bp ATCTGGACTTTGTCACACATCTCCTGGAAGAGCTTCACACCTCCCTaGTCCAGGAGCACACAAACGAACACCCCACGCTTGTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: IWTLSHISWKSFTPP*SRSTQTNTPRLLAA
Trigger: GGCAGCCAACAAGCGTGGGGTGTTCGTTTGTGTGCTCCTGGACCAGGGAGGTGTGAAGCTCTTCCAGGAGATGTGTGACAAAGTCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000536633.2
CDS-3UTR CAA 90 bp GATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGACGAGGTCTCTGATGTaGTTGTGCTTGACGGTCTGG +
Preference number: 5 (lower is better)
Translates to: DSAHRLGPQAGRGGFQLETRSLM*LCLTVW
Trigger: CCAGACCGTCAAGCACAACAACATCAGAGACCTCGT...CTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp CTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGAGGAATTTCCTGCCTGACTaGGCACAGTATATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LVPPQRRLSFPAKNRQGRNFLPD*AQYISP
Trigger: AGGAGAGATATACTGTGCCAAGTCAGGCAGGAAATT...CCTCCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp AGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGCCTGGCCTGTGAACTaGGAGAGGATGTTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: RRNCTFVNKDDHGGETADAWPVN*ERMFRC
Trigger: GCACCGGAACATCCTCTCCAAGTTCACAGGCCAGGC...ATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp TTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCTGCTAAGGCGGCCATaGGCCGGGGCTGCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: FLKLSQQMVKSNLECSAGLLRRP*AGAAPG
Trigger: GCCCGGAGCAGCCCCGGCCAATGGCCGCCTTAGCAG...CCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GCTCTCGTCCCTCCACAGCGAAGGCTGAGCTTCCCCGCCAAAAACCGACAAGGGTGGTTGAATAAATGCTaGAGTGTCTCCCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: ALVPPQRRLSFPAKNRQGWLNKC*SVSLRQ
Trigger: CTGTCTCAGGGAGACACTCAAGCATTTATTCAACCA...CCCTTGTCGGTTTTTGGCGGGGAAGCTCAGCCTTCGCTGTGGAGGGACGAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS GCA 90 bp GCTCCTTTCTCCCATGCCCTCTCAAGTGTTTGTCATTGTCGTGTTTaGAGAGACCGCAGAGGTTCCAGTTCTCAGGCCAACGCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: APFSHALSSVCHCRV*RDRRGSSSQANASS
Trigger: CGAGGAAGCGTTGGCCTGAGAACTGGAACCTCTGCGGTCTCTGCAAACACGACAATGACAAACACTTGAGAGGGCATGGGAGAAAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACGGACCCACTGGCTCTaGACATCTTCCAGACGCTTC +
Preference number: 5 (lower is better)
Translates to: NVQPGPVILTSSQPSAVKRTHWL*TSSRRF
Trigger: GAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCCG...TTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp TGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGAGAGCTGCTGATGTTGTTGTGCTaGACGGTCTGGAAGTACACA +
Preference number: 5 (lower is better)
Translates to: CSSLRTPGWQRRVSTGELLMLLC*TVWKYT
Trigger: TGTGTACTTCCAGACCGTCAAGCACAACAACATCAG...CAGCTCTCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp ATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCGCCTGGCCTGTGAACTaGGAGAGGATGTTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: MLQVPRRGETAPLSTKTTAWPVN*ERMFRC
Trigger: GCACCGGAACATCCTCTCCAAGTTCACAGGCCAGGC...GGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTATGGTGAAATCCAATTaGGAATGTTCAGCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: APLSTKTTTEGRLLMEGGMVKSN*ECSAGP
Trigger: GGGCCCGGCTGAACATTCCAAATTGGATTTCACCAT...ACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp ACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTCACTCACTACATATCCATaGTGGGTTGGTGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: TFVNKDDHGGETADGGWSLTTYP*WVGGVG
Trigger: TCCCACCCCACCAACCCACAATGGATATGTAGTGAG...TGACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTTCTGTTCCCAGCTCTaGGTCTTCACACAGACCCAG +
Preference number: 5 (lower is better)
Translates to: SRQRITCYRCPGEEKLHLFCSQL*VFTQTQ
Trigger: CTGGGTCTGTGTGAAGACCAAGAGCTGGGAACAGAA...AAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CAA 90 bp GGGCCCAAGGATACCCTAGTATTAGCCTTTCCTAAGAGGAGGAGTTTCCCCAACGGGGACCAGTCAGTGTaGGCGCTGAGAAACTGCACA +
Preference number: 5 (lower is better)
Translates to: GPKDTLVLAFPKRRSFPNGDQSV*ALRNCT
Trigger: TGTGCAGTTTCTCAGCGCCAACACTGACTGGTCCCC...GTTGGGGAAACTCCTCCTCTTAGGAAAGGCTAATACTAGGGTATCCTTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp AGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGGGACCAGTCAGTGTaGGCGCTGAGAAACTGCACA +
Preference number: 5 (lower is better)
Translates to: RRNCTFVNKDDHGGETADGDQSV*ALRNCT
Trigger: TGTGCAGTTTCTCAGCGCCAACACTGACTGGTCCCC...ATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CAA 90 bp CAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCATTGTCGTGTTaGCAGAGACCGCAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: QQAAHHMLQVPRRGETAPLSLSC*QRPQRF
Trigger: GAACCTCTGCGGTCTCTGCAAACACGACAATGACAA...AGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CAA 90 bp GCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAACGCCACTCGTCGTaGAGGTGGGTCTTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: AGLGSFCDLASFAFLKLSQRHSS*RWVFGS
Trigger: AGACCCAAAGACCCACCTCAACGACGAGTGGCGTTG...AGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS TCA 90 bp CCACATGTTCATTCCAGCATGGCTTCTCCCATACTTGGCCATCGCTaGGTGCTCACTGCATGCTGGCTGTCTGTACTGAGGGAGAAATGG +
Preference number: 5 (lower is better)
Translates to: PHVHSSMASPILGHR*VLTACWLSVLREKW
Trigger: CCATTTCTCCCTCAGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS GCA 90 bp CGTGCAGGGCACCTCCAAGAAGTGATTTACCGCTGTCCTGAGCAATaGTTCTCAGAACTCCTCATCTGCAGCTGCGGGATTGGCTTATCT +
Preference number: 5 (lower is better)
Translates to: RAGHLQEVIYRCPEQ*FSELLICSCGIGLS
Trigger: AGATAAGCCAATCCCGCAGCTGCAGATGAGGAGTTCTGAGAAGCATTGCTCAGGACAGCGGTAAATCACTTCTTGGAGGTGCCCTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCAAGACGCTTCCGGATTTaGCCCAGGTGCCTTGACCGG +
Preference number: 5 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSRRFRI*PRCLDR
Trigger: CCGGTCAAGGCACCTGGGCAAAATCCGGAAGCGTCT...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp ATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCAGCCGGGCACTCTCGTaGTCACTAAAGTCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: MLQVPRRGETAPLSTKTTSRALS*SLKSAL
Trigger: CAGGGCTGACTTTAGTGACAACGAGAGTGCCCGGCT...GGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTAGGTCTCTGATGTTGTaGTGCTTGACGGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SRQRITCYRCPGEEKLHLRSLML*CLTVWK
Trigger: CTTCCAGACCGTCAAGCACAACAACATCAGAGACCT...AAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp CAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGAGGTCTCTGATGTTGTaGTGCTTGACGGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: QAAHHMLQVPRRGETAPLRSLML*CLTVWK
Trigger: CTTCCAGACCGTCAAGCACAACAACATCAGAGACCT...CAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp TACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGACGAGGTCTCTGATGTaGTTGTGCTTGACGGTCTGG +
Preference number: 5 (lower is better)
Translates to: YRCPGEEKLHLCQQRRPRTRSLM*LCLTVW
Trigger: CCAGACCGTCAAGCACAACAACATCAGAGACCTCGT...CCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AATTTGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCACGAACACCCCACGCTaGTTGGCTGCCTCTAGAATG +
Preference number: 5 (lower is better)
Translates to: NLECSAGPSHSNLISAVSTNTPR*LAASRM
Trigger: CATTCTAGAGGCAGCCAACAAGCGTGGGGTGTTCGT...GCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GGATTCTGCTCATCGCTTAGGACCCCAGGCTGGCAGAGGAGGGTTTCAACTGGATCAGAGATCTGGACTTaGTCACACATCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GFCSSLRTPGWQRRVSTGSEIWT*SHISWK
Trigger: CTTCCAGGAGATGTGTGACAAAGTCCAGATCTCTGA...TCCAGTTGAAACCCTCCTCTGCCAGCCTGGGGTCCTAAGCGATGAGCAGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR CAA 90 bp CCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTCAGTCAGAGATCTGGACTTaGTCACACATCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PLSTKTTTEGRLLMEGGQSEIWT*SHISWK
Trigger: CTTCCAGGAGATGTGTGACAAAGTCCAGATCTCTGA...CTGACCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS-3UTR CAA 90 bp CTCCCAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCTCACCTGAAGGAATGTaGAAGGTACTGCAAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LPAGSASHVTGAQERRNCSPEGM*KVLQAL
Trigger: AAGAGCTTGCAGTACCTTCAACATTCCTTCAGGTGA...GCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS CCA 90 bp CAAAATGGTCCCACATGTTCATTCCAGCATGGCTTCTCCCATACTTaGCCATCGCTGAGTGCTCACTGCATGCTGGCTGTCTGTACTGAG +
Preference number: 5 (lower is better)
Translates to: QNGPTCSFQHGFSHT*PSLSAHCMLAVCTE
Trigger: CTCAGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGGGACCATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CCA 90 bp GCGCTGAGAAACTGCACAAAATGGTCCCACATGTTCATTCCAGCATaGCTTCTCCCATACTTGGCCATCGCTGAGTGCTCACTGCATGCT +
Preference number: 5 (lower is better)
Translates to: ALRNCTKWSHMFIPA*LLPYLAIAECSLHA
Trigger: AGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGGGACCATTTTGTGCAGTTTCTCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CCA 90 bp CAAAATGGTCCCACATGTTCATTCCAGCATGGCTTCTCCCATACTTaGCCATCGCTGAGTGCTCACTGCATGCTGGCTGTCTGTACTGGA +
Preference number: 5 (lower is better)
Translates to: QNGPTCSFQHGFSHT*PSLSAHCMLAVCTG
Trigger: TCCAGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGGGACCATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520541.5
ENST00000523819.5
CDS-3UTR CAA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAGCCGGGCACTCTCGTaGTCACTAAAGTCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVSRALS*SLKSAL
Trigger: CAGGGCTGACTTTAGTGACAACGAGAGTGCCCGGCT...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGAGGTCTCTGATGTTGTaGTGCTTGACGGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: RGETAPLSTKTTTEGRLLRSLML*CLTVWK
Trigger: CTTCCAGACCGTCAAGCACAACAACATCAGAGACCT...CAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTAACACCCCACGCTTGTaGGCTGCCTCTAGAATGTCA +
Preference number: 5 (lower is better)
Translates to: AGLGSFCDLASFAFLKLSNTPRL*AASRMS
Trigger: TGACATTCTAGAGGCAGCCAACAAGCGTGGGGTGTT...AGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAAAACACCCCACGCTTGTaGGCTGCCTCTAGAATGTCA +
Preference number: 5 (lower is better)
Translates to: NVQPGPVILTSSQPSAVKNTPRL*AASRMS
Trigger: TGACATTCTAGAGGCAGCCAACAAGCGTGGGGTGTT...TTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTACGAACACCCCACGCTaGTTGGCTGCCTCTAGAATG +
Preference number: 5 (lower is better)
Translates to: KLGLGASVTWQALPSLNFTNTPR*LAASRM
Trigger: CATTCTAGAGGCAGCCAACAAGCGTGGGGTGTTCGT...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp CAGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTAATTTCCTGCCTGACTaGGCACAGTATATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: QQAAHHMLQVPRRGETAPNFLPD*AQYISP
Trigger: AGGAGAGATATACTGTGCCAAGTCAGGCAGGAAATT...AGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp CACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGGAACTTCTCCCGGATTaGGCCAGCGAATTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: HMLQVPRRGETAPLSTKTELLPD*ASEFPA
Trigger: GGCAGGAAATTCGCTGGCCAAATCCGGGAGAAGTTC...CGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AGCAGGCAGCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTGTGACCTGGCAAGCTTaGCCTTCCTTAAACTTTCTC +
Preference number: 5 (lower is better)
Translates to: SRQRITCYRCPGEEKLHLVTWQA*PSLNFL
Trigger: GAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCAC...AAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGCTGCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp TTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGCTCACTACATATCCATaGTGGGTTGGTGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: LQVPRRGETAPLSTKTTTLTTYP*WVGGVG
Trigger: TCCCACCCCACCAACCCACAATGGATATGTAGTGAG...CGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp TGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGATGGAGGGTGGTGGTTGAATAAATGCTaGAGTGTCTCCCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: CTFVNKDDHGGETADGGWWLNKC*SVSLRQ
Trigger: CTGTCTCAGGGAGACACTCAAGCATTTATTCAACCA...CCACCCTCCATCAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536633.2
CDS-3UTR CAA 90 bp TTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGGGAAGGGCCTCCAGGTaGGAGTCAGCCTCGGCACCA +
Preference number: 5 (lower is better)
Translates to: FLKLSQQMVKSNLECSAGGRASR*ESASAP
Trigger: TGGTGCCGAGGCTGACTCCAACCTGGAGGCCCTTCC...CCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp AATTTGGAATGTTCAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCGGTAATCCAACCACCTaGGCATCCCAAAGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: NLECSAGPSHSNLISAVSGNPTT*ASQSSG
Trigger: CCCAGAACTTTGGGATGCCAAGGTGGTTGGATTACC...GCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTGAACATTCCAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS TCA 90 bp CCACATGTTCATTCCAGCATGGCTTCTCCCATACTTGGCCATCGCTaGGTGCTCACTGCATGCTGGCTGTCTGTACTGGAACTAATTCTC +
Preference number: 5 (lower is better)
Translates to: PHVHSSMASPILGHR*VLTACWLSVLELIL
Trigger: GAGAATTAGTTCCAGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520541.5
ENST00000523819.5
CDS CCA 90 bp TCCCTGAGAAACTGCACAAAATGGTCCCACATGTTCATTCCAGCATaGCTTCTCCCATACTTGGCCATCGCTGAGTGCTCACTGCATGCT +
Preference number: 5 (lower is better)
Translates to: SLRNCTKWSHMFIPA*LLPYLAIAECSLHA
Trigger: AGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGGGACCATTTTGTGCAGTTTCTCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520541.5
CDS CCA 90 bp CCTCTGAGAAACTGCACAAAATGGTCCCACATGTTCATTCCAGCATaGCTTCTCCCATACTTGGCCATCGCTGAGTGCTCACTGCATGCT +
Preference number: 5 (lower is better)
Translates to: PLRNCTKWSHMFIPA*LLPYLAIAECSLHA
Trigger: AGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGGGACCATTTTGTGCAGTTTCTCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523412.1
ENST00000523819.5
CDS CCA 90 bp CAAAATGGTCCCACATGTTCATTCCAGCATGGCTTCTCCCATACTTaGCCATCGCTGAGTGCTCACTGCATGCTGGCTGTCTGTACTGAA +
Preference number: 5 (lower is better)
Translates to: QNGPTCSFQHGFSHT*PSLSAHCMLAVCTE
Trigger: TTCAGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGGGACCATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523412.1
CDS-3UTR CAA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTACGAGGTCTCTGATGTaGTTGTGCTTGACGGTCTGG +
Preference number: 5 (lower is better)
Translates to: KLGLGASVTWQALPSLNFTRSLM*LCLTVW
Trigger: CCAGACCGTCAAGCACAACAACATCAGAGACCTCGT...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCAGAACTTCTCCCGGATTaGGCCAGCGAATTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSELLPD*ASEFPA
Trigger: GGCAGGAAATTCGCTGGCCAAATCCGGGAGAAGTTC...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGGAACTTCTCCCGGATTaGGCCAGCGAATTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVELLPD*ASEFPA
Trigger: GGCAGGAAATTCGCTGGCCAAATCCGGGAGAAGTTC...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTATGGTGAAATCCAATTaGGAATGTTCAGCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: AGLGSFCDLASFAFLKLSMVKSN*ECSAGP
Trigger: GGGCCCGGCTGAACATTCCAAATTGGATTTCACCAT...AGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGGTGACCTGGCAAGCTTaGCCTTCCTTAAACTTTCTC +
Preference number: 5 (lower is better)
Translates to: RGETAPLSTKTTTEGRLLVTWQA*PSLNFL
Trigger: GAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCAC...CAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp ATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCCTCACTACATATCCATaGTGGGTTGGTGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: MLQVPRRGETAPLSTKTTLTTYP*WVGGVG
Trigger: TCCCACCCCACCAACCCACAATGGATATGTAGTGAG...GGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTGCTGGAAGTGGCTTCTaGGAACACTGTCTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLAGSGF*EHCLEN
Trigger: GTTCTCCAGACAGTGTTCCAAGAAGCCACTTCCAGC...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCCAGCCCAAGGCTCTTaGAAGCAAGAATCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: AGLGSFCDLASFAFLKLSPAQGS*KQESES
Trigger: AGACTCAGATTCTTGCTTCAAAGAGCCTTGGGCTGG...AGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS TCA 90 bp CGAGATGATGAACTTCTCCCGGATTTGGCCAGCGAATTTCCTGCCTaGCTTGGCACAGTATATCTCTCCTTCCACACTCCGGATGGAAAT +
Preference number: 5 (lower is better)
Translates to: RDDELLPDLASEFPA*LGTVYLSFHTPDGN
Trigger: ATTTCCATCCGGAGTGTGGAAGGAGAGATATACTGTGCCAAGTCAGGCAGGAAATTCGCTGGCCAAATCCGGGAGAAGTTCATCATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS CCA 90 bp GACAGGACAAATCTCCAGTCCGAGATGATGAACTTCTCCCGGATTTaGCCAGCGAATTTCCTGCCTGACTTGGCACAGTATATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: DRTNLQSEMMNFSRI*PANFLPDLAQYISP
Trigger: AGGAGAGATATACTGTGCCAAGTCAGGCAGGAAATTCGCTGGCCAAATCCGGGAGAAGTTCATCATCTCGGACTGGAGATTTGTCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp TTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGAGACGCTTCCGGATTTaGCCCAGGTGCCTTGACCGG +
Preference number: 5 (lower is better)
Translates to: FLKLSQQMVKSNLECSAGRRFRI*PRCLDR
Trigger: CCGGTCAAGGCACCTGGGCAAAATCCGGAAGCGTCT...CCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GCGCATCACATGTTACAGGTGCCCAGGAGAGGAGAAACTGCACCTTTGTCAACACTGATGTTGTTGTGCTaGACGGTCTGGAAGTACACA +
Preference number: 5 (lower is better)
Translates to: AHHMLQVPRRGETAPLSTLMLLC*TVWKYT
Trigger: TGTGTACTTCCAGACCGTCAAGCACAACAACATCAG...TGTTGACAAAGGTGCAGTTTCTCCTCTCCTGGGCACCTGTAACATGTGATGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AGAGGAGAAACTGCACCTTTGTCAACAAAGACGACCACGGAGGGGAGACTGCTGAATTTCCTGCCTGACTaGGCACAGTATATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: RGETAPLSTKTTTEGRLLNFLPD*AQYISP
Trigger: AGGAGAGATATACTGTGCCAAGTCAGGCAGGAAATT...CAGCAGTCTCCCCTCCGTGGTCGTCTTTGTTGACAAAGGTGCAGTTTCTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTGTGACCTGGCAAGCTTaGCCTTCCTTAAACTTTCTC +
Preference number: 5 (lower is better)
Translates to: AGLGSFCDLASFAFLKLSVTWQA*PSLNFL
Trigger: GAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCAC...AGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp CCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCTCAGTCTTTCGTGACCTGGCAAGCTTaGCCTTCCTTAAACTTTCTC +
Preference number: 5 (lower is better)
Translates to: PQLSRNIQNVPTPSPQSFVTWQA*PSLNFL
Trigger: GAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCAC...GAAAGACTGAGGAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp CAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACAACAATCACCTGAAGGAATGTaGAAGGTACTGCAAGCTCTT +
Preference number: 5 (lower is better)
Translates to: QPGPVILTSSQPSAVKQQSPEGM*KVLQAL
Trigger: AAGAGCTTGCAGTACCTTCAACATTCCTTCAGGTGA...TTGTTGTTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp CAGCCGGGCCCAGTCATTCTAACCTCATCTCAGCCGTCAGCTGTGAAACAACAACTGGGAACTGTTCTGTaGCCACTCTTTATAGGGATT +
Preference number: 5 (lower is better)
Translates to: QPGPVILTSSQPSAVKQQLGTVL*PLFIGI
Trigger: AATCCCTATAAAGAGTGGCAACAGAACAGTTCCCAG...TTGTTGTTTCACAGCTGACGGCTGAGATGAGGTTAGAATGACTGGGCCCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCATTCTGTTCCCAGCTCTaGGTCTTCACACAGACCCAG +
Preference number: 5 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSFCSQL*VFTQTQ
Trigger: CTGGGTCTGTGTGAAGACCAAGAGCTGGGAACAGAA...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTTGTCATTGTCGTGTTaGCAGAGACCGCAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLLSLSC*QRPQRF
Trigger: GAACCTCTGCGGTCTCTGCAAACACGACAATGACAA...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp TGGAAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAAGCATCCTATATTTCTTaGCACTCAGCTAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: WKAGLGSFCDLASFAFLKASYIS*HSARLC
Trigger: GCACAGCCTAGCTGAGTGCAAAGAAATATAGGATGC...TTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp AAAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCAGAGATCTGGACTTaGTCACACATCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KAGLGSFCDLASFAFLKLSEIWT*SHISWK
Trigger: CTTCCAGGAGATGTGTGACAAAGTCCAGATCTCTGA...AAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGATGGTGAAATCCAATTaGGAATGTTCAGCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: SFCDLASFAFLKLSQQMVMVKSN*ECSAGP
Trigger: GGGCCCGGCTGAACATTCCAAATTGGATTTCACCAT...CACCATCTGCTGAGAAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCAATGGTGAAATCCAATTaGGAATGTTCAGCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSMVKSN*ECSAGP
Trigger: GGGCCCGGCTGAACATTCCAAATTGGATTTCACCAT...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp ACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCCCAGTCATGGGGCCTGGGAACATaGAACCATGGCAGTGATTTT +
Preference number: 5 (lower is better)
Translates to: TFSADGEIQFGMFSRAQSWGLGT*NHGSDF
Trigger: AAAATCACTGCCATGGTTCAATGTTCCCAGGCCCCA...TGACTGGGCCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS-3UTR CAA 90 bp TTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGACGAACACCCCACGCTaGTTGGCTGCCTCTAGAATG +
Preference number: 5 (lower is better)
Translates to: FLKLSQQMVKSNLECSAGTNTPR*LAASRM
Trigger: CATTCTAGAGGCAGCCAACAAGCGTGGGGTGTTCGT...CCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp AAGCTGGGCTTGGGAGCTTCTGTGACCTGGCAAGCTTTGCCTTCCTTAAACTTTCTGGGAACTGTTCTGTaGCCACTCTTTATAGGGATT +
Preference number: 5 (lower is better)
Translates to: KLGLGASVTWQALPSLNFLGTVL*PLFIGI
Trigger: AATCCCTATAAAGAGTGGCAACAGAACAGTTCCCAG...AAAGTTTAAGGAAGGCAAAGCTTGCCAGGTCACAGAAGCTCCCAAGCCCAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS TCA 90 bp TACTTGGCCATCGCTGAGTGCTCACTGCATGCTGGCTGTCTGTACTaGGGGAGAAATGGATTATTAGTCCTCATTTCACCAAAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: YLAIAECSLHAGCLY*GRNGLLVLISPKRK
Trigger: TTTCCTCTTTGGTGAAATGAGGACTAATAATCCATTTCTCCCTCAGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CCA 90 bp GCCATTGAAGATGGTTGTTATCTTCCTCTGAGAAACTGCACAAAATaGTCCCACATGTTCATTCCAGCATGGCTTCTCCCATACTTGGCC +
Preference number: 5 (lower is better)
Translates to: AIEDGCYLPLRNCTK*SHMFIPAWLLPYLA
Trigger: GGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGGGACCATTTTGTGCAGTTTCTCAGAGGAAGATAACAACCATCTTCAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523412.1
ENST00000523819.5
CDS-3UTR CAA 90 bp TTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCTGGCCTGTGAACTaGGAGAGGATGTTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: FAFLKLSQQMVKSNLECSAWPVN*ERMFRC
Trigger: GCACCGGAACATCCTCTCCAAGTTCACAGGCCAGGC...TGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAAGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS-3UTR CAA 90 bp GTTTCCCCAACTCTCCCGAAACATCCAGAATGTTCCCACACCTTCTCCTCAGTCGCTTCTTACGGAGTTTaGGGGGCCATTAATATTAAA +
Preference number: 5 (lower is better)
Translates to: VSPTLPKHPECSHTFSSVASYGV*GAINIK
Trigger: TTTAATATTAATGGCCCCCAAAACTCCGTAAGAAGC...GACTGAGGAGAAGGTGTGGGAACATTCTGGATGTTTCGGGAGAGTTGGGGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS TCA 90 bp TTTGGCAACTGCCATGTGCCATTGAAGATGGTTGTTATCTTCCTCTaGGAAACTGCACAAAATGGTCCCACATGTTCATTCCAGCATGGC +
Preference number: 5 (lower is better)
Translates to: FGNCHVPLKMVVIFL*ETAQNGPTCSFQHG
Trigger: GCCATGCTGGAATGAACATGTGGGACCATTTTGTGCAGTTTCTCAGAGGAAGATAACAACCATCTTCAATGGCACATGGCAGTTGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523412.1
ENST00000523819.5
CDS CCA 90 bp CAGGATGCCACAGACTGGGTGATTTATAATGAACAGAAATTTATTTaGCTCATGGTTCTGGGGGCTGAGAAGTCCAAAAGCATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: QDATDWVIYNEQKFI*LMVLGAEKSKSMVP
Trigger: TGGCACCATGCTTTTGGACTTCTCAGCCCCCAGAACCATGAGCCAAATAAATTTCTGTTCATTATAAATCACCCAGTCTGTGGCATCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp TTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCAGCCGGGCTGATGTTGTTGTGCTaGACGGTCTGGAAGTACACA +
Preference number: 5 (lower is better)
Translates to: FLKLSQQMVKSNLECSAGLMLLC*TVWKYT
Trigger: TGTGTACTTCCAGACCGTCAAGCACAACAACATCAG...CCCGGCTGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS TCA 90 bp ATCTTAGTCCATTTATGCTGCTCTAACAGGATGCCACAGACTGGGTaGTTTATAATGAACAGAAATTTATTTGGCTCATGGTTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: ILVHLCCSNRMPQTG*FIMNRNLFGSWFWG
Trigger: CCCCCAGAACCATGAGCCAAATAAATTTCTGTTCATTATAAATCACCCAGTCTGTGGCATCCTGTTAGAGCAGCATAAATGGACTAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS-3UTR CAA 90 bp TTTGCCTTCCTTAAACTTTCTCAGCAGATGGTGAAATCCAATTTGGAATGTTCATCTTTCCTGAATTTCTaGGGAGTGGACCATTCCTGG +
Preference number: 5 (lower is better)
Translates to: FAFLKLSQQMVKSNLECSSFLNF*GVDHSW
Trigger: CCAGGAATGGTCCACTCCCAAGAAATTCAGGAAAGA...TGAACATTCCAAATTGGATTTCACCATCTGCTGAGAAAGTTTAAGGAAGGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS CAA 90 bp GACGTGCGGTCACTGGCGGAGCCACTGCTGCTGCTAAGGCGGCCATaGGCCGGGGCTGCTCCGGGCGGGACGGGGGCGACCAGCCGCGGG +
Preference number: 6 (lower is better)
Translates to: DVRSLAEPLLLLRRP*AGAAPGGTGATSRG
Trigger: CCCGCGGCTGGTCGCCCCCGTCCCGCCCGGAGCAGCCCCGGCCAATGGCCGCCTTAGCAGCAGCAGTGGCTCCGCCAGTGACCGCACGTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS GCA 72 bp CCAGCTGCAGCCGCGTGGGCCTGTAGGCCCCCAGGTTaGTGTAGACAGCGGCGGGCGGGCCGTCGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: PAAAAWACRPPG*CRQRRAGRRGA
Trigger: GGCCCCACGACGGCCCGCCCGCCGCTGTCTACAGCAACCTGGGGGCCTACAGGCCCACGCGGCTGCAGCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS GCA 72 bp GGAGGAGTGGGGCTCCCGCACCCCCGGGAGGCCGCCTaGTCCCAGGACCGGCGTGCAGGGCACCTCCAAGAA +
Preference number: 6 (lower is better)
Translates to: GGVGLPHPREAA*SQDRRAGHLQE
Trigger: TTCTTGGAGGTGCCCTGCACGCCGGTCCTGGGAGCAGGCGGCCTCCCGGGGGTGCGGGAGCCCCACTCCTCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CAA 72 bp TCACTGGCGGAGCCACTGCTGCTGCTAAGGCGGCCATaGGCCGGGGCTGCTCCGGGCGGGACGGGGGCGACC +
Preference number: 6 (lower is better)
Translates to: SLAEPLLLLRRP*AGAAPGGTGAT
Trigger: GGTCGCCCCCGTCCCGCCCGGAGCAGCCCCGGCCAATGGCCGCCTTAGCAGCAGCAGTGGCTCCGCCAGTGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CAA 72 bp CCGGGGTGGCTGCCTGCCGAGCGGCCGCTGAAGGGGTaGGAGGACGTGCGGTCACTGGCGGAGCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: PGWLPAERPLKG*EDVRSLAEPLL
Trigger: CAGCAGTGGCTCCGCCAGTGACCGCACGTCCTCCAACCCCTTCAGCGGCCGCTCGGCAGGCAGCCACCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000522648.5
CDS CAA 72 bp ACGGGGTGGCTGCCTGCCGAGCGGCCGCTGAAGGGGTaGGAGGACGTGCGGTCACTGGCGGAGCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: TGWLPAERPLKG*EDVRSLAEPLL
Trigger: CAGCAGTGGCTCCGCCAGTGACCGCACGTCCTCCAACCCCTTCAGCGGCCGCTCGGCAGGCAGCCACCCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS CCA 72 bp GGCCCTGAAGACGCGGACACACTTCGGGTACCGGGGTaGCTGCCTGCCGAGCGGCCGCTGAAGGGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: GPEDADTLRVPG*LPAERPLKGLE
Trigger: CTCCAACCCCTTCAGCGGCCGCTCGGCAGGCAGCCACCCCGGTACCCGAAGTGTGTCCGCGTCTTCAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS CAA 90 bp CTTCGGGTACCGGGGTGGCTGCCTGCCGAGCGGCCGCTGAAGGGGTaGGAGGACGTGCGGTCACTGGCGGAGCCACTGCTGCTGCTAAGG +
Preference number: 6 (lower is better)
Translates to: LRVPGWLPAERPLKG*EDVRSLAEPLLLLR
Trigger: CCTTAGCAGCAGCAGTGGCTCCGCCAGTGACCGCACGTCCTCCAACCCCTTCAGCGGCCGCTCGGCAGGCAGCCACCCCGGTACCCGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518448.5
CDS CAA 90 bp GTTCGGGTACCGGGGTGGCTGCCTGCCGAGCGGCCGCTGAAGGGGTaGGAGGACGTGCGGTCACTGGCGGAGCCACTGCTGCTGCTAAGG +
Preference number: 6 (lower is better)
Translates to: VRVPGWLPAERPLKG*EDVRSLAEPLLLLR
Trigger: CCTTAGCAGCAGCAGTGGCTCCGCCAGTGACCGCACGTCCTCCAACCCCTTCAGCGGCCGCTCGGCAGGCAGCCACCCCGGTACCCGAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522648.5
CDS GCA 72 bp CTGCGGGATTGGCTTATCTCTCAGGGCCACCTGCCCTaGCCTCGGGCCGGGAGGGCTGGCTCAGACACCTCC +
Preference number: 6 (lower is better)
Translates to: LRDWLISQGHLP*PRAGRAGSDTS
Trigger: GGAGGTGTCTGAGCCAGCCCTCCCGGCCCGAGGGCAGGGCAGGTGGCCCTGAGAGATAAGCCAATCCCGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CCA 72 bp AGGTGCCTTGACCGGCTCATGCCTCCCGTCCCTGGGTaGTGCTGGGGGAGGCTGGCACGTCAGCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: RCLDRLMPPVPG*CWGRLARQLLQ
Trigger: CTGGAGGAGCTGACGTGCCAGCCTCCCCCAGCACCACCCAGGGACGGGAGGCATGAGCCGGTCAAGGCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CAA 90 bp CTTTCAGGAACGGGGTGGCTGCCTGCCGAGCGGCCGCTGAAGGGGTaGGAGGACGTGCGGTCACTGGCGGAGCCACTGCTGCTGCTAAGG +
Preference number: 6 (lower is better)
Translates to: LSGTGWLPAERPLKG*EDVRSLAEPLLLLR
Trigger: CCTTAGCAGCAGCAGTGGCTCCGCCAGTGACCGCACGTCCTCCAACCCCTTCAGCGGCCGCTCGGCAGGCAGCCACCCCGTTCCTGAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276699.10
ENST00000536633.2
CDS GCA 72 bp TGCCTTGACCGGCTCATGCCTCCCGTCCCTGGGTGGTaGTGGGGGAGGCTGGCACGTCAGCTCCTCCAGATG +
Preference number: 6 (lower is better)
Translates to: CLDRLMPPVPGW*WGRLARQLLQM
Trigger: CATCTGGAGGAGCTGACGTGCCAGCCTCCCCCAGCACCACCCAGGGACGGGAGGCATGAGCCGGTCAAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CCA 72 bp CTAACCTCATCTCAGCCGTCAGTTCGGGTACCGGGGTaGCTGCCTGCCGAGCGGCCGCTGAAGGGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: LTSSQPSVRVPG*LPAERPLKGLE
Trigger: CTCCAACCCCTTCAGCGGCCGCTCGGCAGGCAGCCACCCCGGTACCCGAACTGACGGCTGAGATGAGGTTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522648.5
CDS CAA 72 bp TCCAAGAGGGCGTCCGTGGCCAGCCGGGCACTCTCGTaGTCACTAAAGTCAGCCCTGGCTGGCCGGACCCAC +
Preference number: 6 (lower is better)
Translates to: SKRASVASRALS*SLKSALAGRTH
Trigger: GTGGGTCCGGCCAGCCAGGGCTGACTTTAGTGACAACGAGAGTGCCCGGCTGGCCACGGACGCCCTCTTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CAA 90 bp GAACCCCCATCCAAGAGGGCGTCCGTGGCCAGCCGGGCACTCTCGTaGTCACTAAAGTCAGCCCTGGCTGGCCGGACCCACTGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: EPPSKRASVASRALS*SLKSALAGRTHWLL
Trigger: CAAGAGCCAGTGGGTCCGGCCAGCCAGGGCTGACTTTAGTGACAACGAGAGTGCCCGGCTGGCCACGGACGCCCTCTTGGATGGGGGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CCA 72 bp CGACCAGCCGCGGGGACTTCAGGCCCATCACAGGCTTaGAGGAGGCGTAGAGGTGGCGGAACTCCTCGTCAA +
Preference number: 6 (lower is better)
Translates to: RPAAGTSGPSQA*RRRRGGGTPRQ
Trigger: TTGACGAGGAGTTCCGCCACCTCTACGCCTCCTCCAAGCCTGTGATGGGCCTGAAGTCCCCGCGGCTGGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CAA 90 bp GGCCGGACCCACTGGCTCTTGACATCTTCCAGACGCTTCCGGATTTaGCCCAGGTGCCTTGACCGGCTCATGCCTCCCGTCCCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: GRTHWLLTSSRRFRI*PRCLDRLMPPVPGW
Trigger: CCACCCAGGGACGGGAGGCATGAGCCGGTCAAGGCACCTGGGCAAAATCCGGAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS TCA 72 bp ATTTCCTCTCCTCCCAGCCGCAGGGGGAGGCGAAGGTaGGCCGGCTTTCCTGCTGGGTTTCGCAACTCTCCC +
Preference number: 6 (lower is better)
Translates to: ISSPPSRRGRRR*AGFPAGFRNSP
Trigger: GGGAGAGTTGCGAAACCCAGCAGGAAAGCCGGCTCACCTTCGCCTCCCCCTGCGGCTGGGAGGAGAGGAAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518448.5
ENST00000520541.5
ENST00000536633.2
CDS CCA 72 bp GCTGGCACGTCAGCTCCTCCAGATGTGGGAAGCAAATaGAACACACCACGGAGGAGTGGGGCTCCCGCACCC +
Preference number: 6 (lower is better)
Translates to: AGTSAPPDVGSK*NTPRRSGAPAP
Trigger: GGGTGCGGGAGCCCCACTCCTCCGTGGTGTGTTCCATTTGCTTCCCACATCTGGAGGAGCTGACGTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CAA 90 bp AGGTTCCAGTTCTCAGGCCAACGCTTCCTCGCTGGAAGTGGCTTCTaGGAACACTGTCTGGAGAACGAGCCGAGGCTGCCGGCGGCCCAC +
Preference number: 6 (lower is better)
Translates to: RFQFSGQRFLAGSGF*EHCLENEPRLPAAH
Trigger: GTGGGCCGCCGGCAGCCTCGGCTCGTTCTCCAGACAGTGTTCCAAGAAGCCACTTCCAGCGAGGAAGCGTTGGCCTGAGAACTGGAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS TCA 72 bp CCACCGAGGACAAGAAGTCCACCTCGCCTTCCTGGCTaGGCACCCGCCAGTAGGCTTCAGAACCCCCATCCA +
Preference number: 6 (lower is better)
Translates to: PPRTRSPPRLPG*APASRLQNPHP
Trigger: TGGATGGGGGTTCTGAAGCCTACTGGCGGGTGCTCAGCCAGGAAGGCGAGGTGGACTTCTTGTCCTCGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS GCA 72 bp CAGCCGCAGGGGGAGGCGAAGGTGAGCCGGCTTTCCTaGTGGGTTTCGCAACTCTCCCTCAGGCCTTTGTTA +
Preference number: 6 (lower is better)
Translates to: QPQGEAKVSRLS*WVSQLSLRPLL
Trigger: TAACAAAGGCCTGAGGGAGAGTTGCGAAACCCAGCAGGAAAGCCGGCTCACCTTCGCCTCCCCCTGCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518448.5
ENST00000520541.5
ENST00000536633.2
CDS CCA 72 bp CCGCAGGGGGAGGCGAAGGTGAGCCGGCTTTCCTGCTaGGTTTCGCAACTCTCCCTCAGGCCTTTGTTACCA +
Preference number: 6 (lower is better)
Translates to: PQGEAKVSRLSC*VSQLSLRPLLP
Trigger: TGGTAACAAAGGCCTGAGGGAGAGTTGCGAAACCCAGCAGGAAAGCCGGCTCACCTTCGCCTCCCCCTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518448.5
ENST00000520541.5
ENST00000536633.2
CDS CAA 72 bp CATCTTCCAGACGCTTCCGGATTTTGCCCAGGTGCCTaGACCGGCTCATGCCTCCCGTCCCTGGGTGGTGCT +
Preference number: 6 (lower is better)
Translates to: HLPDASGFCPGA*TGSCLPSLGGA
Trigger: AGCACCACCCAGGGACGGGAGGCATGAGCCGGTCAAGGCACCTGGGCAAAATCCGGAAGCGTCTGGAAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CAA 90 bp TGGCGGAACTCCTCGTCAAACAGCTCCACCGCCTGGCCTGTGAACTaGGAGAGGATGTTCCGGTGCACGTGTCCGCAGAGCCAGGTGAAG +
Preference number: 6 (lower is better)
Translates to: WRNSSSNSSTAWPVN*ERMFRCTCPQSQVK
Trigger: CTTCACCTGGCTCTGCGGACACGTGCACCGGAACATCCTCTCCAAGTTCACAGGCCAGGCGGTGGAGCTGTTTGACGAGGAGTTCCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS TCA 72 bp GGAACTCCTCGTCAAACAGCTCCACCGCCTGGCCTGTaGACTTGGAGAGGATGTTCCGGTGCACGTGTCCGC +
Preference number: 6 (lower is better)
Translates to: GTPRQTAPPPGL*TWRGCSGARVR
Trigger: GCGGACACGTGCACCGGAACATCCTCTCCAAGTTCACAGGCCAGGCGGTGGAGCTGTTTGACGAGGAGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS GCA 72 bp TTGACATCTTCCAGACGCTTCCGGATTTTGCCCAGGTaGCTTGACCGGCTCATGCCTCCCGTCCCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: LTSSRRFRILPR*LDRLMPPVPGW
Trigger: CCACCCAGGGACGGGAGGCATGAGCCGGTCAAGGCACCTGGGCAAAATCCGGAAGCGTCTGGAAGATGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CCA 72 bp CCGGGCACTCTCGTTGTCACTAAAGTCAGCCCTGGCTaGCCGGACCCACTGGCTCTTGACATCTTCCAGACG +
Preference number: 6 (lower is better)
Translates to: PGTLVVTKVSPG*PDPLALDIFQT
Trigger: CGTCTGGAAGATGTCAAGAGCCAGTGGGTCCGGCCAGCCAGGGCTGACTTTAGTGACAACGAGAGTGCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CCA 72 bp TCTCAGGCCAACGCTTCCTCGCTGGAAGTGGCTTCTTaGAACACTGTCTGGAGAACGAGCCGAGGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: SQANASSLEVAS*NTVWRTSRGCR
Trigger: CCGGCAGCCTCGGCTCGTTCTCCAGACAGTGTTCCAAGAAGCCACTTCCAGCGAGGAAGCGTTGGCCTGAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CAA 72 bp TCCTCGTCAAACAGCTCCACCGCCTGGCCTGTGAACTaGGAGAGGATGTTCCGGTGCACGTGTCCGCAGAGC +
Preference number: 6 (lower is better)
Translates to: SSSNSSTAWPVN*ERMFRCTCPQS
Trigger: GCTCTGCGGACACGTGCACCGGAACATCCTCTCCAAGTTCACAGGCCAGGCGGTGGAGCTGTTTGACGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CAA 72 bp CGAGATAGACCGGGGGCAGGGCAGTGGTCCATGGATTaGCTCGGCTTCACTCCATGGCTCCGAAGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: RDRPGAGQWSMD*LGFTPWLRSCP
Trigger: TGGACAGCTTCGGAGCCATGGAGTGAAGCCGAGCAAATCCATGGACCACTGCCCTGCCCCCGGTCTATCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523412.1
ENST00000523819.5
CDS GCA 72 bp GAGATAGACCGGGGGCAGGGCAGTGGTCCATGGATTTaGTCGGCTTCACTCCATGGCTCCGAAGCTGTCCAT +
Preference number: 6 (lower is better)
Translates to: EIDRGQGSGPWI*SASLHGSEAVH
Trigger: ATGGACAGCTTCGGAGCCATGGAGTGAAGCCGAGCAAATCCATGGACCACTGCCCTGCCCCCGGTCTATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523412.1
ENST00000523819.5
CDS CCA 72 bp TCTAGCGAGATAGACCGGGGGCAGGGCAGTGGTCCATaGATTTGCTCGGCTTCACTCCATGGCTCCGAAGCT +
Preference number: 6 (lower is better)
Translates to: SSEIDRGQGSGP*ICSASLHGSEA
Trigger: AGCTTCGGAGCCATGGAGTGAAGCCGAGCAAATCCATGGACCACTGCCCTGCCCCCGGTCTATCTCGCTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523412.1
ENST00000523819.5
CDS CAA 72 bp CACTGGCTCTTGACATCTTCCAGACGCTTCCGGATTTaGCCCAGGTGCCTTGACCGGCTCATGCCTCCCGTC +
Preference number: 6 (lower is better)
Translates to: HWLLTSSRRFRI*PRCLDRLMPPV
Trigger: GACGGGAGGCATGAGCCGGTCAAGGCACCTGGGCAAAATCCGGAAGCGTCTGGAAGATGTCAAGAGCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CAA 72 bp CTAAAGTCAGCCCTGGCTGGCCGGACCCACTGGCTCTaGACATCTTCCAGACGCTTCCGGATTTTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: LKSALAGRTHWL*TSSRRFRILPR
Trigger: CCTGGGCAAAATCCGGAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCCGGCCAGCCAGGGCTGACTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CAA 72 bp CGGGTGATGCAGCGGCGGACGAGGTCTCTGATGTTGTaGTGCTTGACGGTCTGGAAGTACACAGTGGCGCTG +
Preference number: 6 (lower is better)
Translates to: RVMQRRTRSLML*CLTVWKYTVAL
Trigger: CAGCGCCACTGTGTACTTCCAGACCGTCAAGCACAACAACATCAGAGACCTCGTCCGCCGCTGCATCACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS CAA 72 bp GTCCGGGTGATGCAGCGGCGGACGAGGTCTCTGATGTaGTTGTGCTTGACGGTCTGGAAGTACACAGTGGCG +
Preference number: 6 (lower is better)
Translates to: VRVMQRRTRSLM*LCLTVWKYTVA
Trigger: CGCCACTGTGTACTTCCAGACCGTCAAGCACAACAACATCAGAGACCTCGTCCGCCGCTGCATCACCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS CAA 72 bp TTCTCAGGCCAACGCTTCCTCGCTGGAAGTGGCTTCTaGGAACACTGTCTGGAGAACGAGCCGAGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: FSGQRFLAGSGF*EHCLENEPRLP
Trigger: CGGCAGCCTCGGCTCGTTCTCCAGACAGTGTTCCAAGAAGCCACTTCCAGCGAGGAAGCGTTGGCCTGAGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CAA 72 bp CTTTCCTGCTGGGTTTCGCAACTCTCCCTCAGGCCTTaGTTACCAAGCAGGGAGCCTCCCTGGCACCACCAG +
Preference number: 6 (lower is better)
Translates to: LSCWVSQLSLRP*LPSREPPWHHQ
Trigger: CTGGTGGTGCCAGGGAGGCTCCCTGCTTGGTAACAAAGGCCTGAGGGAGAGTTGCGAAACCCAGCAGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518448.5
ENST00000520541.5
ENST00000536633.2
CDS CAA 90 bp TCGTTGTCACTAAAGTCAGCCCTGGCTGGCCGGACCCACTGGCTCTaGACATCTTCCAGACGCTTCCGGATTTTGCCCAGGTGCCTTGAC +
Preference number: 6 (lower is better)
Translates to: SLSLKSALAGRTHWL*TSSRRFRILPRCLD
Trigger: GTCAAGGCACCTGGGCAAAATCCGGAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCCGGCCAGCCAGGGCTGACTTTAGTGACAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS TCA 72 bp GCTCCCAGGACCGGCGTGCAGGGCACCTCCAAGAAGTaGTTTACCGCTGTCCTGAGCAATGCTTCTCAGAAC +
Preference number: 6 (lower is better)
Translates to: APRTGVQGTSKK*FTAVLSNASQN
Trigger: GTTCTGAGAAGCATTGCTCAGGACAGCGGTAAATCACTTCTTGGAGGTGCCCTGCACGCCGGTCCTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CAA 90 bp GTCCGGGTGATGCAGCGGCGGACGAGGTCTCTGATGTTGTTGTGCTaGACGGTCTGGAAGTACACAGTGGCGCTGGATTTTTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: VRVMQRRTRSLMLLC*TVWKYTVALDFSFR
Trigger: CCTGAAGGAAAAATCCAGCGCCACTGTGTACTTCCAGACCGTCAAGCACAACAACATCAGAGACCTCGTCCGCCGCTGCATCACCCGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS CAA 90 bp TGGCTAGTCCGGGTGATGCAGCGGCGGACGAGGTCTCTGATGTTGTaGTGCTTGACGGTCTGGAAGTACACAGTGGCGCTGGATTTTTCC +
Preference number: 6 (lower is better)
Translates to: WLVRVMQRRTRSLML*CLTVWKYTVALDFS
Trigger: GGAAAAATCCAGCGCCACTGTGTACTTCCAGACCGTCAAGCACAACAACATCAGAGACCTCGTCCGCCGCTGCATCACCCGGACTAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS CAA 90 bp ACCTGGCTAGTCCGGGTGATGCAGCGGCGGACGAGGTCTCTGATGTaGTTGTGCTTGACGGTCTGGAAGTACACAGTGGCGCTGGATTTT +
Preference number: 6 (lower is better)
Translates to: TWLVRVMQRRTRSLM*LCLTVWKYTVALDF
Trigger: AAAATCCAGCGCCACTGTGTACTTCCAGACCGTCAAGCACAACAACATCAGAGACCTCGTCCGCCGCTGCATCACCCGGACTAGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000536633.2
CDS GCA 72 bp GTGATGCAGCGGCGGACGAGGTCTCTGATGTTGTTGTaGTTGACGGTCTGGAAGTACACAGTGGCGCTGGAT +
Preference number: 6 (lower is better)
Translates to: VMQRRTRSLMLL*LTVWKYTVALD
Trigger: ATCCAGCGCCACTGTGTACTTCCAGACCGTCAAGCACAACAACATCAGAGACCTCGTCCGCCGCTGCATCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS GCA 72 bp CGCTGTCCTGAGCAATGCTTCTCAGAACTCCTCATCTaGAGCTGCGGGATTGGCTTATCTCTCAGGGCCACC +
Preference number: 6 (lower is better)
Translates to: RCPEQCFSELLI*SCGIGLSLRAT
Trigger: GGTGGCCCTGAGAGATAAGCCAATCCCGCAGCTGCAGATGAGGAGTTCTGAGAAGCATTGCTCAGGACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CAA 90 bp TTCTGGCTAGTCCGGGTGATGCAGCGGCGGACGAGGTCTCTGATGTaGTTGTGCTTGACGGTCTGGAAGTACACAGTGGCGCTGGATTTT +
Preference number: 6 (lower is better)
Translates to: FWLVRVMQRRTRSLM*LCLTVWKYTVALDF
Trigger: AAAATCCAGCGCCACTGTGTACTTCCAGACCGTCAAGCACAACAACATCAGAGACCTCGTCCGCCGCTGCATCACCCGGACTAGCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522648.5
CDS TCA 72 bp CATTCCAGCATGGCTTCTCCCATACTTGGCCATCGCTaGGTGCTCACTGCATGCTGGCTGTCTGTACTGAGG +
Preference number: 6 (lower is better)
Translates to: HSSMASPILGHR*VLTACWLSVLR
Trigger: CCTCAGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS CCA 72 bp TTGTCACTAAAGTCAGCCCTGGCTGGCCGGACCCACTaGCTCTTGACATCTTCCAGACGCTTCCGGATTTTG +
Preference number: 6 (lower is better)
Translates to: LSLKSALAGRTH*LLTSSRRFRIL
Trigger: CAAAATCCGGAAGCGTCTGGAAGATGTCAAGAGCCAGTGGGTCCGGCCAGCCAGGGCTGACTTTAGTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000522648.5
ENST00000536633.2
CDS CCA 72 bp TTGTCACACATCTCCTGGAAGAGCTTCACACCTCCCTaGTCCAGGAGCACACAAACGAACACCCCACGCTTG +
Preference number: 6 (lower is better)
Translates to: LSHISWKSFTPP*SRSTQTNTPRL
Trigger: CAAGCGTGGGGTGTTCGTTTGTGTGCTCCTGGACCAGGGAGGTGTGAAGCTCTTCCAGGAGATGTGTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000536633.2
CDS CCA 72 bp CCCACATGTTCATTCCAGCATGGCTTCTCCCATACTTaGCCATCGCTGAGTGCTCACTGCATGCTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: PTCSFQHGFSHT*PSLSAHCMLAV
Trigger: GACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518448.5
ENST00000520541.5
ENST00000523412.1
ENST00000523819.5
ENST00000536633.2
CDS CAA 72 bp CCCTGGTCCAGGAGCACACAAACGAACACCCCACGCTaGTTGGCTGCCTCTAGAATGTCACAGAAGATCTCC +
Preference number: 6 (lower is better)
Translates to: PWSRSTQTNTPR*LAASRMSQKIS
Trigger: GGAGATCTTCTGTGACATTCTAGAGGCAGCCAACAAGCGTGGGGTGTTCGTTTGTGTGCTCCTGGACCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000536633.2
CDS CAA 90 bp ACACCTCCCTGGTCCAGGAGCACACAAACGAACACCCCACGCTTGTaGGCTGCCTCTAGAATGTCACAGAAGATCTCCACATCCGTGAAC +
Preference number: 6 (lower is better)
Translates to: TPPWSRSTQTNTPRL*AASRMSQKISTSVN
Trigger: GTTCACGGATGTGGAGATCTTCTGTGACATTCTAGAGGCAGCCAACAAGCGTGGGGTGTTCGTTTGTGTGCTCCTGGACCAGGGAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000536633.2
CDS CAA 90 bp TTCACACCTCCCTGGTCCAGGAGCACACAAACGAACACCCCACGCTaGTTGGCTGCCTCTAGAATGTCACAGAAGATCTCCACATCCGTG +
Preference number: 6 (lower is better)
Translates to: FTPPWSRSTQTNTPR*LAASRMSQKISTSV
Trigger: CACGGATGTGGAGATCTTCTGTGACATTCTAGAGGCAGCCAACAAGCGTGGGGTGTTCGTTTGTGTGCTCCTGGACCAGGGAGGTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000536633.2
CDS TCA 72 bp CATTCCAGCATGGCTTCTCCCATACTTGGCCATCGCTaGGTGCTCACTGCATGCTGGCTGTCTGTACTGGAA +
Preference number: 6 (lower is better)
Translates to: HSSMASPILGHR*VLTACWLSVLE
Trigger: TTCCAGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520541.5
ENST00000523819.5
CDS TCA 72 bp CATTCCAGCATGGCTTCTCCCATACTTGGCCATCGCTaGGTGCTCACTGCATGCTGGCTGTCTGTACTGAAG +
Preference number: 6 (lower is better)
Translates to: HSSMASPILGHR*VLTACWLSVLK
Trigger: CTTCAGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523412.1
CDS CCA 72 bp TCTCCCGGATTTGGCCAGCGAATTTCCTGCCTGACTTaGCACAGTATATCTCTCCTTCCACACTCCGGATGG +
Preference number: 6 (lower is better)
Translates to: SPGFGQRISCLT*HSISLLPHSGW
Trigger: CCATCCGGAGTGTGGAAGGAGAGATATACTGTGCCAAGTCAGGCAGGAAATTCGCTGGCCAAATCCGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS CAA 72 bp ATGCAGCGGCGGACGAGGTCTCTGATGTTGTTGTGCTaGACGGTCTGGAAGTACACAGTGGCGCTGGATTTT +
Preference number: 6 (lower is better)
Translates to: MQRRTRSLMLLC*TVWKYTVALDF
Trigger: AAAATCCAGCGCCACTGTGTACTTCCAGACCGTCAAGCACAACAACATCAGAGACCTCGTCCGCCGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS CAA 72 bp TCCCACATGTTCATTCCAGCATGGCTTCTCCCATACTaGGCCATCGCTGAGTGCTCACTGCATGCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: SHMFIPAWLLPY*AIAECSLHAGC
Trigger: ACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518448.5
ENST00000520541.5
ENST00000523412.1
ENST00000523819.5
ENST00000536633.2
CDS CAA 90 bp AGCTCCTTTCTCCCATGCCCTCTCAAGTGTTTGTCATTGTCGTGTTaGCAGAGACCGCAGAGGTTCCAGTTCTCAGGCCAACGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: SSFLPCPLKCLSLSC*QRPQRFQFSGQRFL
Trigger: GAGGAAGCGTTGGCCTGAGAACTGGAACCTCTGCGGTCTCTGCAAACACGACAATGACAAACACTTGAGAGGGCATGGGAGAAAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS TCA 72 bp TGCAGGGCACCTCCAAGAAGTGATTTACCGCTGTCCTaGGCAATGCTTCTCAGAACTCCTCATCTGCAGCTG +
Preference number: 6 (lower is better)
Translates to: CRAPPRSDLPLS*AMLLRTPHLQL
Trigger: CAGCTGCAGATGAGGAGTTCTGAGAAGCATTGCTCAGGACAGCGGTAAATCACTTCTTGGAGGTGCCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS TCA 72 bp GACCAGTTCCTGAGTTCATTACTAGAGAAGTTTCTCTaGACGTGTAGAGCACGGGGAGCCAGGAGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: DQFLSSLLEKFL*TCRARGARRGR
Trigger: CCTTCCCCTCCTGGCTCCCCGTGCTCTACACGTTCAGAGAAACTTCTCTAGTAATGAACTCAGGAACTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523412.1
ENST00000523819.5
CDS GCA 72 bp TCCCATGCCCTCTCAAGTGTTTGTCATTGTCGTGTTTaGAGAGACCGCAGAGGTTCCAGTTCTCAGGCCAAC +
Preference number: 6 (lower is better)
Translates to: SHALSSVCHCRV*RDRRGSSSQAN
Trigger: GTTGGCCTGAGAACTGGAACCTCTGCGGTCTCTGCAAACACGACAATGACAAACACTTGAGAGGGCATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS GCA 72 bp GGCTTCTCCCATACTTGGCCATCGCTGAGTGCTCACTaGATGCTGGCTGTCTGTACTGAAGGAATGTTGAAG +
Preference number: 6 (lower is better)
Translates to: GFSHTWPSLSAH*MLAVCTEGMLK
Trigger: CTTCAACATTCCTTCAGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523412.1
CDS CCA 72 bp GGTCCAGGAGCACACAAACGAACACCCCACGCTTGTTaGCTGCCTCTAGAATGTCACAGAAGATCTCCACAT +
Preference number: 6 (lower is better)
Translates to: GPGAHKRTPHAC*LPLECHRRSPH
Trigger: ATGTGGAGATCTTCTGTGACATTCTAGAGGCAGCCAACAAGCGTGGGGTGTTCGTTTGTGTGCTCCTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000536633.2
CDS CAA 72 bp TGGTCCAGGAGCACACAAACGAACACCCCACGCTTGTaGGCTGCCTCTAGAATGTCACAGAAGATCTCCACA +
Preference number: 6 (lower is better)
Translates to: WSRSTQTNTPRL*AASRMSQKIST
Trigger: TGTGGAGATCTTCTGTGACATTCTAGAGGCAGCCAACAAGCGTGGGGTGTTCGTTTGTGTGCTCCTGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000536633.2
CDS CAA 72 bp TTCTCCCGGATTTGGCCAGCGAATTTCCTGCCTGACTaGGCACAGTATATCTCTCCTTCCACACTCCGGATG +
Preference number: 6 (lower is better)
Translates to: FSRIWPANFLPD*AQYISPSTLRM
Trigger: CATCCGGAGTGTGGAAGGAGAGATATACTGTGCCAAGTCAGGCAGGAAATTCGCTGGCCAAATCCGGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS CAA 90 bp ACAAAATGGTCCCACATGTTCATTCCAGCATGGCTTCTCCCATACTaGGCCATCGCTGAGTGCTCACTGCATGCTGGCTGTCTGTACTGG +
Preference number: 6 (lower is better)
Translates to: TKWSHMFIPAWLLPY*AIAECSLHAGCLYW
Trigger: CCAGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGGGACCATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520541.5
ENST00000523819.5
CDS GCA 72 bp TCATGGTTCTGGGGGCTGAGAAGTCCAAAAGCATGGTaGCAGTATCTGGTAAGACCTTCTGCACTGTGCATC +
Preference number: 6 (lower is better)
Translates to: SWFWGLRSPKAW*QYLVRPSALCI
Trigger: GATGCACAGTGCAGAAGGTCTTACCAGATACTGGCACCATGCTTTTGGACTTCTCAGCCCCCAGAACCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS GCA 72 bp CACCTCCAAGAAGTGATTTACCGCTGTCCTGAGCAATaGTTCTCAGAACTCCTCATCTGCAGCTGCGGGATT +
Preference number: 6 (lower is better)
Translates to: HLQEVIYRCPEQ*FSELLICSCGI
Trigger: AATCCCGCAGCTGCAGATGAGGAGTTCTGAGAAGCATTGCTCAGGACAGCGGTAAATCACTTCTTGGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS GCA 72 bp CTGCCTCTGCTCCCCTCCTGGGTGCCTCGATTCCCATaGTGTTTCAAAGATAAGAATTTCCCTGAGAAACTG +
Preference number: 6 (lower is better)
Translates to: LPLLPSWVPRFP*CFKDKNFPEKL
Trigger: CAGTTTCTCAGGGAAATTCTTATCTTTGAAACAGCATGGGAATCGAGGCACCCAGGAGGGGAGCAGAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520541.5
CDS CCA 72 bp AATCTCCAGTCCGAGATGATGAACTTCTCCCGGATTTaGCCAGCGAATTTCCTGCCTGACTTGGCACAGTAT +
Preference number: 6 (lower is better)
Translates to: NLQSEMMNFSRI*PANFLPDLAQY
Trigger: ATACTGTGCCAAGTCAGGCAGGAAATTCGCTGGCCAAATCCGGGAGAAGTTCATCATCTCGGACTGGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS CCA 72 bp AACTGCACAAAATGGTCCCACATGTTCATTCCAGCATaGCTTCTCCCATACTTGGCCATCGCTGAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: NCTKWSHMFIPA*LLPYLAIAECS
Trigger: TGAGCACTCAGCGATGGCCAAGTATGGGAGAAGCCATGCTGGAATGAACATGTGGGACCATTTTGTGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000518448.5
ENST00000520541.5
ENST00000523412.1
ENST00000523819.5
ENST00000536633.2
CDS CAA 90 bp ATGATGAACTTCTCCCGGATTTGGCCAGCGAATTTCCTGCCTGACTaGGCACAGTATATCTCTCCTTCCACACTCCGGATGGAAATGTTC +
Preference number: 6 (lower is better)
Translates to: MMNFSRIWPANFLPD*AQYISPSTLRMEMF
Trigger: GAACATTTCCATCCGGAGTGTGGAAGGAGAGATATACTGTGCCAAGTCAGGCAGGAAATTCGCTGGCCAAATCCGGGAGAAGTTCATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276699.10
ENST00000518448.5
ENST00000521468.1
ENST00000522648.5
ENST00000536633.2
CDS GCA 72 bp GCATGGTGCCAGTATCTGGTAAGACCTTCTGCACTGTaGATCCCATACTGTATGGCAGAAGAAAGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: AWCQYLVRPSAL*IPYCMAEERER
Trigger: TCTCTCTCTTTCTTCTGCCATACAGTATGGGATGCACAGTGCAGAAGGTCTTACCAGATACTGGCACCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS TCA 72 bp ATCGCTGAGTGCTCACTGCATGCTGGCTGTCTGTACTaGGGGAGAAATGGATTATTAGTCCTCATTTCACCA +
Preference number: 6 (lower is better)
Translates to: IAECSLHAGCLY*GRNGLLVLISP
Trigger: TGGTGAAATGAGGACTAATAATCCATTTCTCCCTCAGTACAGACAGCCAGCATGCAGTGAGCACTCAGCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS GCA 72 bp TCCAAAAGCATGGTGCCAGTATCTGGTAAGACCTTCTaGACTGTGCATCCCATACTGTATGGCAGAAGAAAG +
Preference number: 6 (lower is better)
Translates to: SKSMVPVSGKTF*TVHPILYGRRK
Trigger: CTTTCTTCTGCCATACAGTATGGGATGCACAGTGCAGAAGGTCTTACCAGATACTGGCACCATGCTTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS TCA 72 bp GGACCATTTTCTCCTTGTCTTCTCACAGAGCAGCTCTaGAGGAATGTTGAAGGTACTGCAAGCTCTTCAGTT +
Preference number: 6 (lower is better)
Translates to: GPFSPCLLTEQL*RNVEGTASSSV
Trigger: AACTGAAGAGCTTGCAGTACCTTCAACATTCCTTCAGAGCTGCTCTGTGAGAAGACAAGGAGAAAATGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523819.5
CDS CCA 72 bp TCTCCTGAGCATGAGGTGGCTTTAGATATTGCTTCATaGCAATTTGGCAACTGCCATGTGCCATTGAAGATG +
Preference number: 6 (lower is better)
Translates to: SPEHEVALDIAS*QFGNCHVPLKM
Trigger: CATCTTCAATGGCACATGGCAGTTGCCAAATTGCCATGAAGCAATATCTAAAGCCACCTCATGCTCAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523412.1
ENST00000523819.5
CDS CAA 72 bp CTCCTTGTCTTCTCACAGAGCAGCTCTGAAGGAATGTaGAAGGTACTGCAAGCTCTTCAGTTACTGATGAGA +
Preference number: 6 (lower is better)
Translates to: LLVFSQSSSEGM*KVLQALQLLMR
Trigger: TCTCATCAGTAACTGAAGAGCTTGCAGTACCTTCAACATTCCTTCAGAGCTGCTCTGTGAGAAGACAAGGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523819.5
CDS TCA 72 bp GGTCTTCACACAGACCCAGAGATTCTAGTTGAATCCTaGAGGAATGTTGAAGGTACTGCAAGCTCTTCAGTT +
Preference number: 6 (lower is better)
Translates to: GLHTDPEILVES*RNVEGTASSSV
Trigger: AACTGAAGAGCTTGCAGTACCTTCAACATTCCTTCAGGATTCAACTAGAATCTCTGGGTCTGTGTGAAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520541.5
CDS CAA 72 bp GCAGTGATCAAAGAGAAGTCCTCACCTGAAGGAATGTaGAAGGTACTGCAAGCTCTTCAGTTACTGATGAGA +
Preference number: 6 (lower is better)
Translates to: AVIKEKSSPEGM*KVLQALQLLMR
Trigger: TCTCATCAGTAACTGAAGAGCTTGCAGTACCTTCAACATTCCTTCAGGTGAGGACTTCTCTTTGATCACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS TCA 72 bp TCAAACCATAGCAGTGATCAAAGAGAAGTCCTCACCTaGAGGAATGTTGAAGGTACTGCAAGCTCTTCAGTT +
Preference number: 6 (lower is better)
Translates to: SNHSSDQREVLT*RNVEGTASSSV
Trigger: AACTGAAGAGCTTGCAGTACCTTCAACATTCCTTCAGGTGAGGACTTCTCTTTGATCACTGCTATGGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2
CDS TCA 72 bp TGCCATGTGCCATTGAAGATGGTTGTTATCTTCCTCTaGGAAACTGCACAAAATGGTCCCACATGTTCATTC +
Preference number: 6 (lower is better)
Translates to: CHVPLKMVVIFL*ETAQNGPTCSF
Trigger: GAATGAACATGTGGGACCATTTTGTGCAGTTTCTCAGAGGAAGATAACAACCATCTTCAATGGCACATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523412.1
ENST00000523819.5
CDS GCA 72 bp GTGGCTTTAGATATTGCTTCATGGCAATTTGGCAACTaGCATGTGCCATTGAAGATGGTTGTTATCTTCCTC +
Preference number: 6 (lower is better)
Translates to: VALDIASWQFGN*HVPLKMVVIFL
Trigger: GAGGAAGATAACAACCATCTTCAATGGCACATGGCAGTTGCCAAATTGCCATGAAGCAATATCTAAAGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523412.1
ENST00000523819.5
CDS CCA 72 bp TTTATAATGAACAGAAATTTATTTGGCTCATGGTTCTaGGGGCTGAGAAGTCCAAAAGCATGGTGCCAGTAT +
Preference number: 6 (lower is better)
Translates to: FIMNRNLFGSWF*GLRSPKAWCQY
Trigger: ATACTGGCACCATGCTTTTGGACTTCTCAGCCCCCAGAACCATGAGCCAAATAAATTTCTGTTCATTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518448.5
ENST00000536633.2