RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM71F1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135248

Ensembl transcript IDs: ENST00000315184.9, ENST00000466842.1, ENST00000469348.5, ENST00000471558.5, ENST00000483459.1, ENST00000484425.6, ENST00000485070.5, ENST00000493738.5, ENST00000621392.4

Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGAGAGCACATCTTGCTAGGCCAGCTCTGGCAGTGGCATGGAGGTaGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGC +
Preference number: 1 (lower is better)
Translates to: LRAHLARPALAVAWR*HMPRCSGEDVVMYS
Trigger: GCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTGGCCTAGCAAGATGTGCTCTCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR CCA 90 bp GCCATTCTGAGAGCACATCTTGCTAGGCCAGCTCTGGCAGTGGCATaGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATG +
Preference number: 1 (lower is better)
Translates to: AILRAHLARPALAVA*RWHMPRCSGEDVVM
Trigger: CATAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTGGCCTAGCAAGATGTGCTCTCAGAATGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR TCA 90 bp ACTTCCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTaGGAGCACATCTTGCTAGGCCAGCTCTGGCAGTGGCATGGAGGT +
Preference number: 1 (lower is better)
Translates to: TSLSLLSFISWARPF*EHILLGQLWQWHGG
Trigger: ACCTCCATGCCACTGCCAGAGCTGGCCTAGCAAGATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR TCA 90 bp CTGAGCCCCCAGGTTTCGATATGCTCAAGGGTGCAGTCAGAGCAATaGCTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGC +
Preference number: 1 (lower is better)
Translates to: LSPQVSICSRVQSEQ*LGPMSLRALRCYKR
Trigger: GCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACTGCACCCTTGAGCATATCGAAACCTGGGGGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
3UTR TCA 90 bp TCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCAAAGTGGTGTTaGCGAGGCTTGCATAGATTCTCCCCAGTGCGGAAGGGTGGCTCA +
Preference number: 1 (lower is better)
Translates to: SIPIIPQQLNAAKWC*RGLHRFSPVRKGGS
Trigger: TGAGCCACCCTTCCGCACTGGGGAGAATCTATGCAAGCCTCGTCAACACCACTTTGCAGCATTCAGCTGCTGAGGGATTATCGGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
3UTR GCA 90 bp TATGCTCAAGGGTGCAGTCAGAGCAATGACTTGGGCCCATGTCTTTaGGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTA +
Preference number: 1 (lower is better)
Translates to: YAQGCSQSNDLGPCL*ELFVAISACLLQAV
Trigger: TACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACTGCACCCTTGAGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
3UTR TCA 90 bp GCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGTaGGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTACTCTC +
Preference number: 1 (lower is better)
Translates to: ARTWLCTAGKALLSP*DDSILPWLQFSPTL
Trigger: GAGAGTAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR TCA 90 bp GACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGTGAGATaGCTCTATTCTTCCTTGGTTGCAGTTTTCTCCTACTCTCCATCC +
Preference number: 1 (lower is better)
Translates to: DVVMYSWKGSAVTVR*LYSSLVAVFSYSPS
Trigger: GGATGGAGAGTAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR CCA 90 bp CATTCTAAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTaGATGGCGTTGGCACTATTTTCATTTCCATTTTACAGATCTGAA +
Preference number: 1 (lower is better)
Translates to: HSKCLVHMSSLDPDI*MALALFSFPFYRSE
Trigger: TTCAGATCTGTAAAATGGAAATGAAAATAGTGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTTAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
3UTR-3UTR TCA 90 bp CTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTGCTGCAAAGTGGTGTTaGCGAGGCTTGCATAGATTC +
Preference number: 2 (lower is better)
Translates to: LAVAWRWHMPRCSGEDVVAAKWC*RGLHRF
Trigger: GAATCTATGCAAGCCTCGTCAACACCACTTTGCAGC...AACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR TCA 90 bp CTGCAAAGTGGTGTTGACGAGGCTTGCATAGATTCTCCCCAGTGCGGAAGGGTGTGGGCCCGGCCATTCTaGGAGCACATCTTGCTAGGC +
Preference number: 2 (lower is better)
Translates to: LQSGVDEACIDSPQCGRVWARPF*EHILLG
Trigger: GCCTAGCAAGATGTGCTCTCAGAATGGCCGGGCCCA...CACCCTTCCGCACTGGGGAGAATCTATGCAAGCCTCGTCAACACCACTTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR TCA 90 bp CTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTGCTGTCACCGTGAGATaGCTCTATTCTTCCTTGGTT +
Preference number: 2 (lower is better)
Translates to: LAVAWRWHMPRCSGEDVVAVTVR*LYSSLV
Trigger: AACCAAGGAAGAATAGAGTCATCTCACGGTGACAGC...AACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR GCA 90 bp GGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGGGTGTTGACGAGGCTTaGATAGATTCTCCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: GAVARTWLCTAGKALLSPGVDEA*IDSPQC
Trigger: GCACTGGGGAGAATCTATGCAAGCCTCGTCAACACC...CGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR GCA 90 bp TGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGTCAGCAGCTGAATGCTaGAAAGTGGTGTTGACGAGG +
Preference number: 2 (lower is better)
Translates to: WRWHMPRCSGEDVVMYSWSAAEC*KVVLTR
Trigger: CCTCGTCAACACCACTTTGCAGCATTCAGCTGCTGA...CCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR CCA 90 bp CTCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTGCTCTGGCAGTGGCATaGAGGTGGCATATGCCGAGG +
Preference number: 2 (lower is better)
Translates to: LSGVCPFSCPPYLVYQVSALAVA*RWHMPR
Trigger: CCTCGGCATATGCCACCTCCATGCCACTGCCAGAGC...AGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR CAA 90 bp GCCCCCAGGTTTCGATATGCTCAAGGGTGCAGTCAGAGCAATGACTaGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGC +
Preference number: 2 (lower is better)
Translates to: APRFRYAQGCSQSND*GPCLCELFVAISAC
Trigger: GCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACTGCACCCTTGAGCATATCGAAACCTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
3UTR-3UTR TCA 90 bp CATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGCTCTGCTGTCACCGTaGGATGACTCTATTCTTCCT +
Preference number: 2 (lower is better)
Translates to: HGGGICRGAVARTWLCTAALLSP*DDSILP
Trigger: AGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGC...AGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR TCA 90 bp GTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATGGGCCCGGCCATTCTaGGAGCACATCTTGCTAGGC +
Preference number: 2 (lower is better)
Translates to: VSLLLSSLSRLPSLFRFLWARPF*EHILLG
Trigger: GCCTAGCAAGATGTGCTCTCAGAATGGCCGGGCCCA...TAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR TCA 90 bp TGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTTGGGCCCGGCCATTCTaGGAGCACATCTTGCTAGGC +
Preference number: 2 (lower is better)
Translates to: CVPSLVLLISSTKSLPFPWARPF*EHILLG
Trigger: GCCTAGCAAGATGTGCTCTCAGAATGGCCGGGCCCA...AGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR TCA 90 bp GGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTTCCATTTTACAGATCTaGAGACTGAGCCCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: GICRGAVARTWLCTAGKASILQI*RLSPQV
Trigger: AACCTGGGGGCTCAGTCTTCAGATCTGTAAAATGGA...AGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484425.6
3UTR-3UTR GCA 90 bp CTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCCCTCAGCAGCTGAATaGTGCAAAGTGGTGTTGACG +
Preference number: 2 (lower is better)
Translates to: LRGVSLLLSSLSRLPSLFPSAAE*CKVVLT
Trigger: CGTCAACACCACTTTGCAGCATTCAGCTGCTGAGGG...GAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR GCA 90 bp TTCCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCAGCTGGAAAGGCTCTaGTGTCACCGTGAGATGACT +
Preference number: 2 (lower is better)
Translates to: FPFTPFLHLLGPAILRAHQLERL*CHREMT
Trigger: AGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTG...ATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR CCA 90 bp CTCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTGCAGTGGCGAGGACGTaGTTATGTACAGCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: LSGVCPFSCPPYLVYQVSAVART*LCTAGK
Trigger: CTTTCCAGCTGTACATAACCACGTCCTCGCCACTGC...AGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR CCA 90 bp CTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTAGCTCTGGCAGTGGCATaGAGGTGGCATATGCCGAGG +
Preference number: 2 (lower is better)
Translates to: LCCHREMTLFFLGCSFLLALAVA*RWHMPR
Trigger: CCTCGGCATATGCCACCTCCATGCCACTGCCAGAGC...TAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR CCA 90 bp CTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTATTGCTAGGCCAGCTCTaGCAGTGGCATGGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: LCCHREMTLFFLGCSFLLLLGQL*QWHGGG
Trigger: GCCACCTCCATGCCACTGCCAGAGCTGGCCTAGCAA...TAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR TCA 90 bp CTCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTGCTGCAAAGTGGTGTTaGCGAGGCTTGCATAGATTC +
Preference number: 2 (lower is better)
Translates to: LSGVCPFSCPPYLVYQVSAAKWC*RGLHRF
Trigger: GAATCTATGCAAGCCTCGTCAACACCACTTTGCAGC...AGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR TCA 90 bp CAGCTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCGCTGCAAAGTGGTGTTaGCGAGGCTTGCATAGATTC +
Preference number: 2 (lower is better)
Translates to: QLERLCCHREMTLFFLGCAAKWC*RGLHRF
Trigger: GAATCTATGCAAGCCTCGTCAACACCACTTTGCAGC...GCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR GCA 90 bp CTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTCCCTCAGCAGCTGAATaGTGCAAAGTGGTGTTGACG +
Preference number: 2 (lower is better)
Translates to: LERLCCHREMTLFFLGCSPSAAE*CKVVLT
Trigger: CGTCAACACCACTTTGCAGCATTCAGCTGCTGAGGG...ACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR GCA 90 bp AGGGAAATGGAAGGTGTCTGGCAGTTCACATTTGTCCAGAATGGTCTGAGCAGGCCCTCAGCAGCTGAATaGTGCAAAGTGGTGTTGACG +
Preference number: 2 (lower is better)
Translates to: REMEGVWQFTFVQNGLSRPSAAE*CKVVLT
Trigger: CGTCAACACCACTTTGCAGCATTCAGCTGCTGAGGG...CCTGCTCAGACCATTCTGGACAAATGTGAACTGCCAGACACCTTCCATTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315184.9
ENST00000621392.4
3UTR-3UTR GCA 90 bp GTGCAAGGGATGCTGTCTTCACGGGAAGAATCTTTCCCTGAGCTGTTCTTGTTGCAGCTGGAAAGGCTCTaGTGTCACCGTGAGATGACT +
Preference number: 2 (lower is better)
Translates to: VQGMLSSREESFPELFLLQLERL*CHREMT
Trigger: AGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTG...CAACAAGAACAGCTCAGGGAAAGATTCTTCCCGTGAAGACAGCATCCCTTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
3UTR-3UTR CCA 90 bp GTGCAAGGGATGCTGTCTTCACGGGAAGAATCTTTCCCTGAGCTGTTCTTGTTGGCAGTGGCGAGGACGTaGTTATGTACAGCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: VQGMLSSREESFPELFLLAVART*LCTAGK
Trigger: CTTTCCAGCTGTACATAACCACGTCCTCGCCACTGC...CAACAAGAACAGCTCAGGGAAAGATTCTTCCCGTGAAGACAGCATCCCTTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
3UTR-3UTR CCA 90 bp TGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGTCCTCCAAGCTGTACTaGTTTTCAGTTTATTACCAG +
Preference number: 2 (lower is better)
Translates to: WRWHMPRCSGEDVVMYSWSSKLY*FSVYYQ
Trigger: CTGGTAATAAACTGAAAACCAGTACAGCTTGGAGGA...CCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
3UTR-3UTR TCA 90 bp TCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTGCTCTGCTGTCACCGTaGGATGACTCTATTCTTCCT +
Preference number: 2 (lower is better)
Translates to: SQGCVPSLVLLISSTKSLALLSP*DDSILP
Trigger: AGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGC...AAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR GCA 90 bp TCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTTCAGCAGCTGAATGCTaGAAAGTGGTGTTGACGAGG +
Preference number: 2 (lower is better)
Translates to: SQGCVPSLVLLISSTKSLSAAEC*KVVLTR
Trigger: CCTCGTCAACACCACTTTGCAGCATTCAGCTGCTGA...AAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR GCA 90 bp AAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCATTGCGAGCTCTTCGTTaGTATAAGCGCTTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: KCLVHMSSLDPDIWMALALRALR*YKRLPP
Trigger: AGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAA...TGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
3UTR-3UTR CCA 90 bp CCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCTTTGTGTGGCCAGCTCTGGCAGTaGCATGGAGGTGGCATATGC +
Preference number: 2 (lower is better)
Translates to: PYLVYQVSSVSYYHFSLCGQLWQ*HGGGIC
Trigger: GCATATGCCACCTCCATGCCACTGCCAGAGCTGGCC...ACACAAAGAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR TCA 90 bp AGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCGCTCTGCTGTCACCGTaGGATGACTCTATTCTTCCT +
Preference number: 2 (lower is better)
Translates to: RLCCHREMTLFFLGCSFLALLSP*DDSILP
Trigger: AGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGC...GAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR GCA 90 bp GGTGTCTGGCAGTTCACATTTGTCCAGAATGGTCTGAGCAGGGAAGAAAACATTGGTGTTGACGAGGCTTaGATAGATTCTCCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: GVWQFTFVQNGLSREENIGVDEA*IDSPQC
Trigger: GCACTGGGGAGAATCTATGCAAGCCTCGTCAACACC...AATGTTTTCTTCCCTGCTCAGACCATTCTGGACAAATGTGAACTGCCAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315184.9
ENST00000621392.4
3UTR-3UTR GCA 90 bp CTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTACAGCTGGAAAGGCTCTaGTGTCACCGTGAGATGACT +
Preference number: 2 (lower is better)
Translates to: LCCHREMTLFFLGCSFLLQLERL*CHREMT
Trigger: AGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTG...TAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR TCA 90 bp GTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTAGCTGTCACCGTGAGATaGCTCTATTCTTCCTTGGTT +
Preference number: 2 (lower is better)
Translates to: VSLLLSSLSRLPSLFRFLAVTVR*LYSSLV
Trigger: AACCAAGGAAGAATAGAGTCATCTCACGGTGACAGC...TAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR GCA 90 bp CTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCAGGTGTTGACGAGGCTTaGATAGATTCTCCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: LLLSSLSRLPSLFRFLLPGVDEA*IDSPQC
Trigger: GCACTGGGGAGAATCTATGCAAGCCTCGTCAACACC...TGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR GCA 90 bp TCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCCCCTCAGCAGCTGAATaGTGCAAAGTGGTGTTGACG +
Preference number: 2 (lower is better)
Translates to: SCPPYLVYQVSSVSYYHFPSAAE*CKVVLT
Trigger: CGTCAACACCACTTTGCAGCATTCAGCTGCTGAGGG...GAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR CCA 90 bp TTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCGCAGTGGCGAGGACGTaGTTATGTACAGCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: LSSLSRLPSLFRFLLPLLAVART*LCTAGK
Trigger: CTTTCCAGCTGTACATAACCACGTCCTCGCCACTGC...GAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR GCA 90 bp ATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCACTATTTTCATTTCCAGTTGCTATAAGCGCTTaGCTCCTCCAAGCTGTACTG +
Preference number: 2 (lower is better)
Translates to: MSSLDPDIWMALALFSFPVAISA*LLQAVL
Trigger: CAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAAC...TGGAAATGAAAATAGTGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
3UTR-3UTR GCA 90 bp TCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCTTTGTTGCTATAAGCGCTTaGCTCCTCCAAGCTGTACTG +
Preference number: 2 (lower is better)
Translates to: SSLSRLPSLFRFLLPLLFVAISA*LLQAVL
Trigger: CAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAAC...AAAGAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
3UTR-3UTR CCA 90 bp TCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCCACATTTGTCCAGAATaGTCTGAGCAGGGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: SCPPYLVYQVSSVSYYHFHICPE*SEQGRK
Trigger: TTTTCTTCCCTGCTCAGACCATTCTGGACAAATGTG...GAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315184.9
ENST00000621392.4
3UTR GCA 72 bp CTAGGCCAGCTCTGGCAGTGGCATGGAGGTGGCATATaGCGAGGTGCAGTGGCGAGGACGTGGTTATGTACA +
Preference number: 3 (lower is better)
Translates to: LGQLWQWHGGGI*RGAVARTWLCT
Trigger: TGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTGGCCTAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR CCA 72 bp GGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTaGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTC +
Preference number: 3 (lower is better)
Translates to: GSGMEVAYAEVQ*RGRGYVQLERL
Trigger: GAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR TCA 72 bp GGCCGGAGGGGTTCTCTCTTTCCCACTCTCCGTACGTaGATGAAGCCCTCCAACGTAGGTCACAGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: GRRGSLFPTLRT*MKPSNVGHRCK
Trigger: CTTGCACCTGTGACCTACGTTGGAGGGCTTCATTCACGTACGGAGAGTGGGAAAGAGAGAACCCCTCCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
3UTR GCA 72 bp GCTCTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTaGAGTGGCGAGGACGTGGTTATGTACAGCTGGAAA +
Preference number: 3 (lower is better)
Translates to: ALAVAWRWHMPR*SGEDVVMYSWK
Trigger: TTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR TCA 72 bp TCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTaGGAGCACATCTTGCTAGGCCAGCTCTGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: SLLSFISWARPF*EHILLGQLWQW
Trigger: CCACTGCCAGAGCTGGCCTAGCAAGATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR CAA 90 bp AGGCCGGAGGGGTTCTCTCTTTCCCACTCTCCGTACGTGAATGAAGCCCTCCAAAGTCAGAGCAATGACTaGGGCCCATGTCTTTGCGAG +
Preference number: 3 (lower is better)
Translates to: RPEGFSLSHSPYVNEALQSQSND*GPCLCE
Trigger: CTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACT...TTGGAGGGCTTCATTCACGTACGGAGAGTGGGAAAGAGAGAACCCCTCCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
3UTR GCA 72 bp GGGTGCAGTCAGAGCAATGACTTGGGCCCATGTCTTTaGGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTC +
Preference number: 3 (lower is better)
Translates to: GCSQSNDLGPCL*ELFVAISACLL
Trigger: GAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACTGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
3UTR-3UTR CAA 90 bp CAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGCCTTTCCTTCATCTCTaGGGCCCGGCCATTCTGAGA +
Preference number: 3 (lower is better)
Translates to: QGCVPSLVLLISSTKSLPPFLHL*GPAILR
Trigger: TCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGG...CGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR GCA 72 bp ATGAAGCCCTCCAACGTAGGTCACAGGTGCAAGGGATaGTGTCTTCACGGGAAGAATCTTTCCCTGAGCTGT +
Preference number: 3 (lower is better)
Translates to: MKPSNVGHRCKG*CLHGKNLSLSC
Trigger: ACAGCTCAGGGAAAGATTCTTCCCGTGAAGACAGCATCCCTTGCACCTGTGACCTACGTTGGAGGGCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
3UTR-3UTR CAA 90 bp AGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCCTTTCCTTCATCTCTaGGGCCCGGCCATTCTGAGA +
Preference number: 3 (lower is better)
Translates to: RLCCHREMTLFFLGCSFLPFLHL*GPAILR
Trigger: TCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGG...GAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR-3UTR CAA 90 bp AAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCACGTTGCTATAAGCGCTaGCCTCCTCCAAGCTGTACT +
Preference number: 3 (lower is better)
Translates to: KCLVHMSSLDPDIWMALARCYKR*PPPSCT
Trigger: AGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACG...TGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
3UTR-3UTR CAA 90 bp TGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTCGTTGCTATAAGCGCTaGCCTCCTCCAAGCTGTACT +
Preference number: 3 (lower is better)
Translates to: CVPSLVLLISSTKSLPFPRCYKR*PPPSCT
Trigger: AGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACG...AGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
3UTR-3UTR CAA 90 bp TCTAAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGCTTGGGCCCATGTCTTaGCGAGCTCTTCGTTGCTAT +
Preference number: 3 (lower is better)
Translates to: SKCLVHMSSLDPDIWMALLGPMS*RALRCY
Trigger: ATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAG...CAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
3UTR-3UTR CAA 90 bp GTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTACCTGAGCTGTTCTTGTaGGTCTCCACCTTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: VSLLLSSLSRLPSLFRFLPELFL*VSTFLL
Trigger: CAGCAGAAAGGTGGAGACCAACAAGAACAGCTCAGG...TAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
3UTR TCA 72 bp ATGTACAGCTGGAAAGGCTCTGCTGTCACCGTGAGATaGCTCTATTCTTCCTTGGTTGCAGTTTTCTCCTAC +
Preference number: 3 (lower is better)
Translates to: MYSWKGSAVTVR*LYSSLVAVFSY
Trigger: GTAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR TCA 72 bp AATCTGCTGAGTAGCATTCTAAGTGCTTGGTGCATATaGGCTCATTGGATCCTGACATCTGGATGGCGTTGG +
Preference number: 3 (lower is better)
Translates to: NLLSSILSAWCI*AHWILTSGWRW
Trigger: CCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTTAGAATGCTACTCAGCAGATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
3UTR TCA 72 bp TGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGTaGGATGACTCTATTCTTCCTTGGTTGCAGTTTTCT +
Preference number: 3 (lower is better)
Translates to: WLCTAGKALLSP*DDSILPWLQFS
Trigger: AGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR GCA 72 bp CCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTaGCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTA +
Preference number: 3 (lower is better)
Translates to: PCLCELFVAISA*LLQAVLVFSLL
Trigger: TAATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp CAGCTCTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGCTCTGGGTCCTCAGGTaGCTGCTCCAGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: QLWQWHGGGICRGAVARTLWVLR*LLQLLP
Trigger: TGGCAGGAGCTGGAGCAGCCACCTGAGGACCCAGAG...CGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484425.6
ENST00000485070.5
CDS-3UTR CCA 90 bp CTGCAAAGTGGTGTTGACGAGGCTTGCATAGATTCTCCCCAGTGCGGAAGGGTGGGGTGGGGCCAGCTGTaGCCCGGTGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LQSGVDEACIDSPQCGRVGWGQL*PGGGCQ
Trigger: CTGGCAGCCTCCACCGGGCCACAGCTGGCCCCACCC...CACCCTTCCGCACTGGGGAGAATCTATGCAAGCCTCGTCAACACCACTTTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp CTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTTGGGCCCGGCCATTCTaGGAGCACATCTTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: LAVAWRWHMPRCSGEDVVWARPF*EHILLG
Trigger: GCCTAGCAAGATGTGCTCTCAGAATGGCCGGGCCCA...AACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp GGCCAGCTCTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGTGCTCAGGGGCCTGCTaGACATTTGTCCTGGGATCT +
Preference number: 4 (lower is better)
Translates to: GQLWQWHGGGICRGAVARCSGAC*TFVLGS
Trigger: AGATCCCAGGACAAATGTGCAGCAGGCCCCTGAGCA...CCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR CCA 90 bp CTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTGCTCTGGCAGTGGCATaGAGGTGGCATATGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LAVAWRWHMPRCSGEDVVALAVA*RWHMPR
Trigger: CCTCGGCATATGCCACCTCCATGCCACTGCCAGAGC...AACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTGGCCAGCTCTGGCAGTaGCATGGAGGTGGCATATGC +
Preference number: 4 (lower is better)
Translates to: LAVAWRWHMPRCSGEDVVGQLWQ*HGGGIC
Trigger: GCATATGCCACCTCCATGCCACTGCCAGAGCTGGCC...AACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp CAGCTCTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTCATTAGCTGAATaGGACTCTCGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLWQWHGGGICRGAVARTWSLAE*DSRWAG
Trigger: CCCAGCCCAGCGAGAGTCTCATTCAGCTAATGACCA...CGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp CAGCTCTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGCCCACTCTCCGTACGTaGATGAAGCCCTCCAACGTA +
Preference number: 4 (lower is better)
Translates to: QLWQWHGGGICRGAVARTPTLRT*MKPSNV
Trigger: TACGTTGGAGGGCTTCATTCACGTACGGAGAGTGGG...CGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp TGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGGGCCCGGCCATTCTaGGAGCACATCTTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: WQWHGGGICRGAVARTWLWARPF*EHILLG
Trigger: GCCTAGCAAGATGTGCTCTCAGAATGGCCGGGCCCA...TAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp GGCCAGCTCTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGCCCTCAGCAGCTGAATaGTGCAAAGTGGTGTTGACG +
Preference number: 4 (lower is better)
Translates to: GQLWQWHGGGICRGAVARPSAAE*CKVVLT
Trigger: CGTCAACACCACTTTGCAGCATTCAGCTGCTGAGGG...CCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CAGGTGCAAGGGATGCTGTCTTCACGGGAAGAATCTTTCCCTGAGCTGTTCTTGGGGTGGGGCCAGCTGTaGCCCGGTGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QVQGMLSSREESFPELFLGWGQL*PGGGCQ
Trigger: CTGGCAGCCTCCACCGGGCCACAGCTGGCCCCACCC...CAAGAACAGCTCAGGGAAAGATTCTTCCCGTGAAGACAGCATCCCTTGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR TCA 90 bp CCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCAGGCTGCCAGAGTGCTaGGTAGTGAGAGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRCSGEDVVMYSWKGSAVRLPEC*VVRGAA
Trigger: TGCAGCCCCTCTCACTACTCAGCACTCTGGCAGCCT...GACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp CCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCTGGGCCCGGCCATTCTaGGAGCACATCTTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: PRCSGEDVVMYSWKGSAVWARPF*EHILLG
Trigger: GCCTAGCAAGATGTGCTCTCAGAATGGCCGGGCCCA...GACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp CTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTCTCAACATGTGGCTTTaGGCTCTGGGTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LAVAWRWHMPRCSGEDVVLNMWL*ALGPQV
Trigger: CACCTGAGGACCCAGAGCTCAAAGCCACATGTTGAG...AACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484425.6
ENST00000485070.5
CDS-3UTR GCA 90 bp GGCCAGCTCTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGCACAGGTGCAAGGGATaGTGTCTTCACGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: GQLWQWHGGGICRGAVARHRCKG*CLHGKN
Trigger: ATTCTTCCCGTGAAGACAGCATCCCTTGCACCTGTG...CCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CAGCTCTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGGGTGTTGACGAGGCTTaGATAGATTCTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: QLWQWHGGGICRGAVARTGVDEA*IDSPQC
Trigger: GCACTGGGGAGAATCTATGCAAGCCTCGTCAACACC...CGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CAGCTCTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGCCCTCAGCAGCTGAATaGTGCAAAGTGGTGTTGACG +
Preference number: 4 (lower is better)
Translates to: QLWQWHGGGICRGAVARTPSAAE*CKVVLT
Trigger: CGTCAACACCACTTTGCAGCATTCAGCTGCTGAGGG...CGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTAGTCTGGTTCTGCCCCTaGTGCCATTTGACACTGGCC +
Preference number: 4 (lower is better)
Translates to: WQWHGGGICRGAVARTWLVWFCP*CHLTLA
Trigger: GGCCAGTGTCAAATGGCACCAGGGGCAGAACCAGAC...TAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTAGACTCTCGCTGGGCTaGGAGGCTTGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LAVAWRWHMPRCSGEDVVRLSLG*EAWSFF
Trigger: GAAGAAACTCCAAGCCTCCCAGCCCAGCGAGAGTCT...AACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGGGTGGGGCCAGCTGTaGCCCGGTGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GCSFLLLSIPIIPQQLNAGWGQL*PGGGCQ
Trigger: CTGGCAGCCTCCACCGGGCCACAGCTGGCCCCACCC...AGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GGCCAGCTCTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGATCAGTCCTTCCCTCTaGTCATTCAGATCACACCCC +
Preference number: 4 (lower is better)
Translates to: GQLWQWHGGGICRGAVARISPSL*SFRSHP
Trigger: GGGGTGTGATCTGAATGACCAGAGGGAAGGACTGAT...CCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp TATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGGGCCCGGCCATTCTaGGAGCACATCTTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: YAEVQWRGRGYVQLERLCWARPF*EHILLG
Trigger: GCCTAGCAAGATGTGCTCTCAGAATGGCCGGGCCCA...GCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CAGTGCGGAAGGGTGGCTCAAATAGAATTTCCTATGGGTGGGGCCAGCTGTGGCCTCCTGAGGGGCTGCTaGAGTTCTTGGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: QCGRVAQIEFPMGGASCGLLRGC*SSWVPG
Trigger: GCCTGGTACCCAAGAACTGCAGCAGCCCCTCAGGAG...GCCACAGCTGGCCCCACCCATAGGAAATTCTATTTGAGCCACCCTTCCGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR GCA 90 bp GGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTCCTGAGGGGCTGCTaGAGTTCTTGGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: GICRGAVARTWLCTAGKALLRGC*SSWVPG
Trigger: GCCTGGTACCCAAGAACTGCAGCAGCCCCTCAGGAG...AGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CAGCTCTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGAACGTAGGTCACAGGTaGAAGGGATGCTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: QLWQWHGGGICRGAVARTNVGHR*KGCCLH
Trigger: GTGAAGACAGCATCCCTTGCACCTGTGACCTACGTT...CGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTCCAGGGCCATGGTGTTaGAAGCTTTGTAGACGTCTC +
Preference number: 4 (lower is better)
Translates to: LAVAWRWHMPRCSGEDVVPGPWC*KLCRRL
Trigger: GAGACGTCTACAAAGCTTCCAACACCATGGCCCTGG...AACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp AGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCGGGTGGGGCCAGCTGTaGCCCGGTGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RLCCHREMTLFFLGCSFLGWGQL*PGGGCQ
Trigger: CTGGCAGCCTCCACCGGGCCACAGCTGGCCCCACCC...GAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGTGGGCCAGCTCTGGCAGTaGCATGGAGGTGGCATATGC +
Preference number: 4 (lower is better)
Translates to: CSGEDVVMYSWKGSAVTVGQLWQ*HGGGIC
Trigger: GCATATGCCACCTCCATGCCACTGCCAGAGCTGGCC...CACGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTCTGCTGCTCCTCAACTaGTTCTGCTGGTGTAAGTCG +
Preference number: 4 (lower is better)
Translates to: LAVAWRWHMPRCSGEDVVLLLLN*FCWCKS
Trigger: CGACTTACACCAGCAGAACCAGTTGAGGAGCAGCAG...AACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp CTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTAAGTCGGCAAAAATCTaGGACAGGGCTTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: LAVAWRWHMPRCSGEDVVKSAKI*DRASLS
Trigger: GGAGAGTGAAGCCCTGTCTCAGATTTTTGCCGACTT...AACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CTGCAAAGTGGTGTTGACGAGGCTTGCATAGATTCTCCCCAGTGCGGAAGGGTGAGTAGTGAGAGGGGCTaGAGGCCGGAGGGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LQSGVDEACIDSPQCGRVSSERG*RPEGFS
Trigger: AGAGAACCCCTCCGGCCTGCAGCCCCTCTCACTACT...CACCCTTCCGCACTGGGGAGAATCTATGCAAGCCTCGTCAACACCACTTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATCACCCCCAGGGCCATaGTGTTGGAAGCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: WQWHGGGICRGAVARTWLSPPGP*CWKLCR
Trigger: TCTACAAAGCTTCCAACACCATGGCCCTGGGGGTGA...TAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGTGGTCTGGTTCTGCCCCTaGTGCCATTTGACACTGGCC +
Preference number: 4 (lower is better)
Translates to: CSGEDVVMYSWKGSAVTVVWFCP*CHLTLA
Trigger: GGCCAGTGTCAAATGGCACCAGGGGCAGAACCAGAC...CACGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCAGACTCTCGCTGGGCTaGGAGGCTTGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PRCSGEDVVMYSWKGSAVRLSLG*EAWSFF
Trigger: GAAGAAACTCCAAGCCTCCCAGCCCAGCGAGAGTCT...GACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTAGCAGTGGCGAGGACGTaGTTATGTACAGCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: WQWHGGGICRGAVARTWLAVART*LCTAGK
Trigger: CTTTCCAGCTGTACATAACCACGTCCTCGCCACTGC...TAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp TGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTAGCTCTGCTGTCACCGTaGGATGACTCTATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: WQWHGGGICRGAVARTWLALLSP*DDSILP
Trigger: AGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGC...TAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCGGTGTTGACGAGGCTTaGATAGATTCTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PRCSGEDVVMYSWKGSAVGVDEA*IDSPQC
Trigger: GCACTGGGGAGAATCTATGCAAGCCTCGTCAACACC...GACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCCAGCTGGAAAGGCTCTaGTGTCACCGTGAGATGACT +
Preference number: 4 (lower is better)
Translates to: PRCSGEDVVMYSWKGSAVQLERL*CHREMT
Trigger: AGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTG...GACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGGCTCTGGCAGTGGCATaGAGGTGGCATATGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QGCVPSLVLLISSTKSLPALAVA*RWHMPR
Trigger: CCTCGGCATATGCCACCTCCATGCCACTGCCAGAGC...CGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CAGCTCTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGGAAATGGAAGGTGTCTaGCAGTTCACATTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QLWQWHGGGICRGAVARTEMEGV*QFTFVQ
Trigger: CTGGACAAATGTGAACTGCCAGACACCTTCCATTTC...CGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315184.9
ENST00000621392.4
CDS-3UTR TCA 90 bp CTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCACAGGCAAGAGGCCCCTaGATTCTTCCCAGGCATTCA +
Preference number: 4 (lower is better)
Translates to: LGPMSLRALRCYKRLPPPQARGP*ILPRHS
Trigger: TGAATGCCTGGGAAGAATTCAGGGGCCTCTTGCCTG...TGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471558.5
CDS-3UTR TCA 90 bp GACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCTGGTCATTAGCTGAATaGGACTCTCGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DLGPCLCELFVAISACLLWSLAE*DSRWAG
Trigger: CCCAGCCCAGCGAGAGTCTCATTCAGCTAATGACCA...GAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR TCA 90 bp CTCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTAGGCTGCCAGAGTGCTaGGTAGTGAGAGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSGVCPFSCPPYLVYQVSRLPEC*VVRGAA
Trigger: TGCAGCCCCTCTCACTACTCAGCACTCTGGCAGCCT...AGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp AGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCAGGCTGCCAGAGTGCTaGGTAGTGAGAGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SNDLGPCLCELFVAISACRLPEC*VVRGAA
Trigger: TGCAGCCCCTCTCACTACTCAGCACTCTGGCAGCCT...GCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR TCA 90 bp CCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCGCTGCAAAGTGGTGTTaGCGAGGCTTGCATAGATTC +
Preference number: 4 (lower is better)
Translates to: PRCSGEDVVMYSWKGSAVAAKWC*RGLHRF
Trigger: GAATCTATGCAAGCCTCGTCAACACCACTTTGCAGC...GACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp GGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGGCTGCAAAGTGGTGTTaGCGAGGCTTGCATAGATTC +
Preference number: 4 (lower is better)
Translates to: GAVARTWLCTAGKALLSPAAKWC*RGLHRF
Trigger: GAATCTATGCAAGCCTCGTCAACACCACTTTGCAGC...CGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp GACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCTGCTCAGGGGCCTGCTaGACATTTGTCCTGGGATCT +
Preference number: 4 (lower is better)
Translates to: DLGPCLCELFVAISACLLCSGAC*TFVLGS
Trigger: AGATCCCAGGACAAATGTGCAGCAGGCCCCTGAGCA...GAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471558.5
CDS-3UTR GCA 90 bp GGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGTTCCATGTCTGGTTCTaGCCCTGGTGCCATTTGACA +
Preference number: 4 (lower is better)
Translates to: GAVARTWLCTAGKALLSPFHVWF*PWCHLT
Trigger: TGTCAAATGGCACCAGGGGCAGAACCAGACATGGAA...CGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp GGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGTCAGCAGCTGAATGCTaGAAAGTGGTGTTGACGAGG +
Preference number: 4 (lower is better)
Translates to: GAVARTWLCTAGKALLSPSAAEC*KVVLTR
Trigger: CCTCGTCAACACCACTTTGCAGCATTCAGCTGCTGA...CGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp GGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGTTCAGATCACACCCCTaGTCCAGCACCTGTTATAGC +
Preference number: 4 (lower is better)
Translates to: GAVARTWLCTAGKALLSPFRSHP*SSTCYS
Trigger: GCTATAACAGGTGCTGGAGCAGGGGTGTGATCTGAA...CGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCGGTCTGTTCCATGTCTaGTTCTGCCCCTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: DLGPCLCELFVAISACLLGLFHV*FCPWCH
Trigger: ATGGCACCAGGGGCAGAACCAGACATGGAACAGACC...GAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp GGCTGCAGGCCGGAGGGGTTCTCTCTTTCCCACTCTCCGTACGTGAATGAAGCCTCTTCAGGAAGATGTTaGGGGCTATGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GCRPEGFSLSHSPYVNEASSGRC*GLWMVC
Trigger: ACAGACCATCCATAGCCCCCAACATCTTCCTGAAGA...GGCTTCATTCACGTACGGAGAGTGGGAAAGAGAGAACCCCTCCGGCCTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CCA 90 bp AGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTGGCCAGCTCTGGCAGTaGCATGGAGGTGGCATATGC +
Preference number: 4 (lower is better)
Translates to: RGVSLLLSSLSRLPSLFRGQLWQ*HGGGIC
Trigger: GCATATGCCACCTCCATGCCACTGCCAGAGCTGGCC...ACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CAGCTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCGGCCAGCTCTGGCAGTaGCATGGAGGTGGCATATGC +
Preference number: 4 (lower is better)
Translates to: QLERLCCHREMTLFFLGCGQLWQ*HGGGIC
Trigger: GCATATGCCACCTCCATGCCACTGCCAGAGCTGGCC...GCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCTTTTGCTAGGCCAGCTCTaGCAGTGGCATGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PFTPFLHLLGPAILRAHLLLGQL*QWHGGG
Trigger: GCCACCTCCATGCCACTGCCAGAGCTGGCCTAGCAA...AAGATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCTTGCTAGGCCAGCTCTaGCAGTGGCATGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LRGVSLLLSSLSRLPSLFLLGQL*QWHGGG
Trigger: GCCACCTCCATGCCACTGCCAGAGCTGGCCTAGCAA...GAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCTCTGGGTCCTCAGGTaGCTGCTCCAGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SQGCVPSLVLLISSTKSLLWVLR*LLQLLP
Trigger: TGGCAGGAGCTGGAGCAGCCACCTGAGGACCCAGAG...AAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484425.6
ENST00000485070.5
CDS-3UTR TCA 90 bp CAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGCAGGCAAGAGGCCCCTaGATTCTTCCCAGGCATTCA +
Preference number: 4 (lower is better)
Translates to: QGCVPSLVLLISSTKSLPQARGP*ILPRHS
Trigger: TGAATGCCTGGGAAGAATTCAGGGGCCTCTTGCCTG...CGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR TCA 90 bp CATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTAAGTCGGCAAAAATCTaGGACAGGGCTTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: HGGGICRGAVARTWLCTAKSAKI*DRASLS
Trigger: GGAGAGTGAAGCCCTGTCTCAGATTTTTGCCGACTT...AGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp CATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTCCTTTCTGCTGCTCCTaGAACTCAACTGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HGGGICRGAVARTWLCTAPFCCS*NSTGSA
Trigger: AGCAGAACCAGTTGAGTTTCAGGAGCAGCAGAAAGG...AGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR TCA 90 bp CTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTAGGCTGCCAGAGTGCTaGGTAGTGAGAGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LERLCCHREMTLFFLGCSRLPEC*VVRGAA
Trigger: TGCAGCCCCTCTCACTACTCAGCACTCTGGCAGCCT...ACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp GGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTGCTCTGCTGTCACCGTaGGATGACTCTATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GICRGAVARTWLCTAGKAALLSP*DDSILP
Trigger: AGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGC...AGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTCTCCTGAGGGGCTGCTaGAGTTCTTGGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: LERLCCHREMTLFFLGCSLLRGC*SSWVPG
Trigger: GCCTGGTACCCAAGAACTGCAGCAGCCCCTCAGGAG...ACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp GGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTCTCCTGAGGGGCTGCTaGAGTTCTTGGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: GCSFLLLSIPIIPQQLNALLRGC*SSWVPG
Trigger: GCCTGGTACCCAAGAACTGCAGCAGCCCCTCAGGAG...AGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTAACGTAGGTCACAGGTaGAAGGGATGCTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: HGGGICRGAVARTWLCTANVGHR*KGCCLH
Trigger: GTGAAGACAGCATCCCTTGCACCTGTGACCTACGTT...AGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp GGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTAGTAGTGAGAGGGGCTaGAGGCCGGAGGGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GCSFLLLSIPIIPQQLNASSERG*RPEGFS
Trigger: AGAGAACCCCTCCGGCCTGCAGCCCCTCTCACTACT...AGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTAGTAGTGAGAGGGGCTaGAGGCCGGAGGGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LERLCCHREMTLFFLGCSSSERG*RPEGFS
Trigger: AGAGAACCCCTCCGGCCTGCAGCCCCTCTCACTACT...ACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CCTTGGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAAAGTAGTGAGAGGGGCTaGAGGCCGGAGGGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: PWLQFSPTLHPDNPSAAESSERG*RPEGFS
Trigger: AGAGAACCCCTCCGGCCTGCAGCCCCTCTCACTACT...TTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp TGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGTGTTGCGAGCTCTTCGTTaGTATAAGCGCTTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CSGEDVVMYSWKGSAVTVLRALR*YKRLPP
Trigger: AGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAA...CACGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CCA 90 bp AGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTGTCTGGTTCTGCCCCTaGTGCCATTTGACACTGGCC +
Preference number: 4 (lower is better)
Translates to: RGVSLLLSSLSRLPSLFRVWFCP*CHLTLA
Trigger: GGCCAGTGTCAAATGGCACCAGGGGCAGAACCAGAC...ACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCGTTGGGGGCTATGGATaGTCTGTTCCATGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: YAEVQWRGRGYVQLERLCVGGYG*SVPCLV
Trigger: AACCAGACATGGAACAGACCATCCATAGCCCCCAAC...GCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp AGGCCGGAGGGGTTCTCTCTTTCCCACTCTCCGTACGTGAATGAAGCCCTCCAAAACTGCTGGTCCAACTaGTTCCTCAACTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RPEGFSLSHSPYVNEALQNCWSN*FLNWFC
Trigger: GCAGAACCAGTTGAGGAACCAGTTGGACCAGCAGTT...TTGGAGGGCTTCATTCACGTACGGAGAGTGGGAAAGAGAGAACCCCTCCGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR TCA 90 bp TGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGTGCCCTTTTGCAGAATTTaGACCAGTCGGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CSGEDVVMYSWKGSAVTVPFCRI*TSRIQK
Trigger: CTTCTGGATCCGACTGGTTCAAATTCTGCAAAAGGG...CACGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp TTCCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCCCTTGGTCATTAGCTaGATGAGACTCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPFTPFLHLLGPAILRAHPLVIS*MRLSLG
Trigger: GCCCAGCGAGAGTCTCATTCAGCTAATGACCAAGGG...ATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp AGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCCCTTGGTCATTAGCTaGATGAGACTCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SNDLGPCLCELFVAISACPLVIS*MRLSLG
Trigger: GCCCAGCGAGAGTCTCATTCAGCTAATGACCAAGGG...GCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR TCA 90 bp CTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCCCTTGGTCATTAGCTaGATGAGACTCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LRGVSLLLSSLSRLPSLFPLVIS*MRLSLG
Trigger: GCCCAGCGAGAGTCTCATTCAGCTAATGACCAAGGG...GAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp CAGCTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCCCCACTCTCCGTACGTaGATGAAGCCCTCCAACGTA +
Preference number: 4 (lower is better)
Translates to: QLERLCCHREMTLFFLGCPTLRT*MKPSNV
Trigger: TACGTTGGAGGGCTTCATTCACGTACGGAGAGTGGG...GCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp TTCCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCCCACTCTCCGTACGTaGATGAAGCCCTCCAACGTA +
Preference number: 4 (lower is better)
Translates to: FPFTPFLHLLGPAILRAHPTLRT*MKPSNV
Trigger: TACGTTGGAGGGCTTCATTCACGTACGGAGAGTGGG...ATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp AGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTCTCAACATGTGGCTTTaGGCTCTGGGTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RGVSLLLSSLSRLPSLFRLNMWL*ALGPQV
Trigger: CACCTGAGGACCCAGAGCTCAAAGCCACATGTTGAG...ACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484425.6
ENST00000485070.5
CDS-3UTR GCA 90 bp TTCCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATACATGCTCAGGGGCCTaGTGCACATTTGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FPFTPFLHLLGPAILRAHTCSGA*CTFVLG
Trigger: TCCCAGGACAAATGTGCAGCAGGCCCCTGAGCATGT...ATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR GCA 90 bp TCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTACATGCTCAGGGGCCTaGTGCACATTTGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLRALRCYKRLPPPSCTGTCSGA*CTFVLG
Trigger: TCCCAGGACAAATGTGCAGCAGGCCCCTGAGCATGT...ACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471558.5
CDS-3UTR GCA 90 bp TCTAAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGCTCCTGAGGGGCTGCTaGAGTTCTTGGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: SKCLVHMSSLDPDIWMALLLRGC*SSWVPG
Trigger: GCCTGGTACCCAAGAACTGCAGCAGCCCCTCAGGAG...CAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR GCA 90 bp GGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGTTCCTCAACTGGTTCTaGTGGTGTAAGTCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GAVARTWLCTAGKALLSPFLNWF*WCKSAK
Trigger: TTTTGCCGACTTACACCAGCAGAACCAGTTGAGGAA...CGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR GCA 90 bp CTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCATTGCGAGCTCTTCGTTaGTATAAGCGCTTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGPMSLRALRCYKRLPPPLRALR*YKRLPP
Trigger: AGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAA...TGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp TCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTGTCTGGTTCTGCCCCTaGTGCCATTTGACACTGGCC +
Preference number: 4 (lower is better)
Translates to: SQGCVPSLVLLISSTKSLVWFCP*CHLTLA
Trigger: GGCCAGTGTCAAATGGCACCAGGGGCAGAACCAGAC...AAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCAGTTGGGGGCTATGGATaGTCTGTTCCATGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LGPMSLRALRCYKRLPPPVGGYG*SVPCLV
Trigger: AACCAGACATGGAACAGACCATCCATAGCCCCCAAC...TGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp TGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCACCGTGTCTTCAGGAAGATGTTaGGGGCTATGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: CSGEDVVMYSWKGSAVTVSSGRC*GLWMVC
Trigger: ACAGACCATCCATAGCCCCCAACATCTTCCTGAAGA...CACGGTGACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTAAGACAGTCTCAGGATaGTCAGGATGGAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GICRGAVARTWLCTAGKAKTVSG*SGWSFR
Trigger: CCTAAAGCTCCATCCTGACCATCCTGAGACTGTCTT...AGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCAAAGCTCTGGCAGTGGCATaGAGGTGGCATATGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QFSPTLHPDNPSAAECCKALAVA*RWHMPR
Trigger: CCTCGGCATATGCCACCTCCATGCCACTGCCAGAGC...TTTGCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCAAATTGCTAGGCCAGCTCTaGCAGTGGCATGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QFSPTLHPDNPSAAECCKLLGQL*QWHGGG
Trigger: GCCACCTCCATGCCACTGCCAGAGCTGGCCTAGCAA...TTTGCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTGCTAGGCCAGCTCTaGCAGTGGCATGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VSLLLSSLSRLPSLFRFLLLGQL*QWHGGG
Trigger: GCCACCTCCATGCCACTGCCAGAGCTGGCCTAGCAA...TAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCAAACTGCTGGTCCAACTaGTTCCTCAACTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGPMSLRALRCYKRLPPPNCWSN*FLNWFC
Trigger: GCAGAACCAGTTGAGGAACCAGTTGGACCAGCAGTT...TGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR TCA 90 bp GGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTTGGTCATTAGCTGAATaGGACTCTCGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GCSFLLLSIPIIPQQLNAWSLAE*DSRWAG
Trigger: CCCAGCCCAGCGAGAGTCTCATTCAGCTAATGACCA...AGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp TCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCCTTGGTCATTAGCTaGATGAGACTCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SQGCVPSLVLLISSTKSLPLVIS*MRLSLG
Trigger: GCCCAGCGAGAGTCTCATTCAGCTAATGACCAAGGG...AAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp GACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCGCTGTCACCGTGAGATaGCTCTATTCTTCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: DLGPCLCELFVAISACLLAVTVR*LYSSLV
Trigger: AACCAAGGAAGAATAGAGTCATCTCACGGTGACAGC...GAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR TCA 90 bp CTGCAAAGTGGTGTTGACGAGGCTTGCATAGATTCTCCCCAGTGCGGAAGGGTGGCTGTCACCGTGAGATaGCTCTATTCTTCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LQSGVDEACIDSPQCGRVAVTVR*LYSSLV
Trigger: AACCAAGGAAGAATAGAGTCATCTCACGGTGACAGC...CACCCTTCCGCACTGGGGAGAATCTATGCAAGCCTCGTCAACACCACTTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp CAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGGCTCTGCTGTCACCGTaGGATGACTCTATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QGCVPSLVLLISSTKSLPALLSP*DDSILP
Trigger: AGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGC...CGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCTTTTGGGTACCAGGCAGTaGGTGACAAGAATCCTAGGG +
Preference number: 4 (lower is better)
Translates to: PFTPFLHLLGPAILRAHLLGTRQ*VTRILG
Trigger: CCCTAGGATTCTTGTCACGCACTGCCTGGTACCCAA...AAGATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CAGAGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTTGGGTACCAGGCAGTaGGTGACAAGAATCCTAGGG +
Preference number: 4 (lower is better)
Translates to: QSNDLGPCLCELFVAISALGTRQ*VTRILG
Trigger: CCCTAGGATTCTTGTCACGCACTGCCTGGTACCCAA...AGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR GCA 90 bp AGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCAATCTCCTGAGGGGCTaGTGCAGTTCTTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: SNDLGPCLCELFVAISACNLLRG*CSSWVP
Trigger: TGGTACCCAAGAACTGCAGCAGCCCCTCAGGAGATT...GCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR GCA 90 bp CAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGCACAGGTGCAAGGGATaGTGTCTTCACGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: QGCVPSLVLLISSTKSLPHRCKG*CLHGKN
Trigger: ATTCTTCCCGTGAAGACAGCATCCCTTGCACCTGTG...CGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCTTGGTGTTGACGAGGCTTaGATAGATTCTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PFTPFLHLLGPAILRAHLGVDEA*IDSPQC
Trigger: GCACTGGGGAGAATCTATGCAAGCCTCGTCAACACC...AAGATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CTCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTCAGCTGGAAAGGCTCTaGTGTCACCGTGAGATGACT +
Preference number: 4 (lower is better)
Translates to: LSGVCPFSCPPYLVYQVSQLERL*CHREMT
Trigger: AGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTG...AGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CAGCTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCCAGCTGGAAAGGCTCTaGTGTCACCGTGAGATGACT +
Preference number: 4 (lower is better)
Translates to: QLERLCCHREMTLFFLGCQLERL*CHREMT
Trigger: AGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTG...GCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTGCCATCATTATGTCTaGATCCTGGCCGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QGCVPSLVLLISSTKSLPCHHYV*ILAGEK
Trigger: CTTCTCACCGGCCAGGATGCAGACATAATGATGGCA...CGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485070.5
CDS-3UTR CCA 90 bp AGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCTCACCCCCAGGGCCATaGTGTTGGAAGCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SNDLGPCLCELFVAISACSPPGP*CWKLCR
Trigger: TCTACAAAGCTTCCAACACCATGGCCCTGGGGGTGA...GCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp CGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTCACCCCCAGGGCCATaGTGTTGGAAGCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RALRCYKRLPPPSCTGFQSPPGP*CWKLCR
Trigger: TCTACAAAGCTTCCAACACCATGGCCCTGGGGGTGA...CTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp TCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTGGTCTGTTCCATGTCTaGTTCTGCCCCTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SQGCVPSLVLLISSTKSLGLFHV*FCPWCH
Trigger: ATGGCACCAGGGGCAGAACCAGACATGGAACAGACC...AAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CTGCAAAGTGGTGTTGACGAGGCTTGCATAGATTCTCCCCAGTGCGGAAGGGTGAGATGTTGGGGGCTATaGATGGTCTGTTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LQSGVDEACIDSPQCGRVRCWGL*MVCSMS
Trigger: AGACATGGAACAGACCATCCATAGCCCCCAACATCT...CACCCTTCCGCACTGGGGAGAATCTATGCAAGCCTCGTCAACACCACTTTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGAGTCGGATCCAGAAGTaGAAGACAGTCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: QGCVPSLVLLISSTKSLPSRIQK*KTVSGW
Trigger: CCATCCTGAGACTGTCTTCCACTTCTGGATCCGACT...CGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCGAAATGGAAGGTGTCTaGCAGTTCACATTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: YAEVQWRGRGYVQLERLCEMEGV*QFTFVQ
Trigger: CTGGACAAATGTGAACTGCCAGACACCTTCCATTTC...GCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315184.9
ENST00000621392.4
CDS-3UTR CCA 90 bp CCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCTATTATGTCTGCATCCTaGCCGGTGAGAAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PFHSFPSSLGPGHSESTSIMSAS*PVRRGK
Trigger: TTTCCCCCTTCTCACCGGCCAGGATGCAGACATAAT...AGATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485070.5
CDS-3UTR CCA 90 bp TTCCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCTGCTGCTCCTCAACTaGTTCTGCTGGTGTAAGTCG +
Preference number: 4 (lower is better)
Translates to: FPFTPFLHLLGPAILRAHLLLLN*FCWCKS
Trigger: CGACTTACACCAGCAGAACCAGTTGAGGAGCAGCAG...ATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp TTCCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATTTGAATTCTGGAGAATaGACCACCCGGCAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: FPFTPFLHLLGPAILRAHLNSGE*TTRQSS
Trigger: ACTGCTCTGCCGGGTGGTTCATTCTCCAGAATTCAA...ATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR TCA 90 bp AGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCAAAGTGGTCATTAGCTGAATaGGACTCTCGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SFLLLSIPIIPQQLNAAKWSLAE*DSRWAG
Trigger: CCCAGCCCAGCGAGAGTCTCATTCAGCTAATGACCA...CTTTGCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp AGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCTGGTCATTAGCTGAATaGGACTCTCGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLCCHREMTLFFLGCSFLWSLAE*DSRWAG
Trigger: CCCAGCCCAGCGAGAGTCTCATTCAGCTAATGACCA...GAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp TTCCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATAAGTCGGCAAAAATCTaGGACAGGGCTTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: FPFTPFLHLLGPAILRAHKSAKI*DRASLS
Trigger: GGAGAGTGAAGCCCTGTCTCAGATTTTTGCCGACTT...ATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp CTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCGCTGCAAAGTGGTGTTaGCGAGGCTTGCATAGATTC +
Preference number: 4 (lower is better)
Translates to: LRGVSLLLSSLSRLPSLFAAKWC*RGLHRF
Trigger: GAATCTATGCAAGCCTCGTCAACACCACTTTGCAGC...GAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTGGGTACCAGGCAGTaGGTGACAAGAATCCTAGGG +
Preference number: 4 (lower is better)
Translates to: LERLCCHREMTLFFLGCSLGTRQ*VTRILG
Trigger: CCCTAGGATTCTTGTCACGCACTGCCTGGTACCCAA...ACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp AGGGAAATGGAAGGTGTCTGGCAGTTCACATTTGTCCAGAATGGTCTGAGCAGGAATCTCCTGAGGGGCTaGTGCAGTTCTTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: REMEGVWQFTFVQNGLSRNLLRG*CSSWVP
Trigger: TGGTACCCAAGAACTGCAGCAGCCCCTCAGGAGATT...CCTGCTCAGACCATTCTGGACAAATGTGAACTGCCAGACACCTTCCATTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315184.9
ENST00000621392.4
CDS-3UTR GCA 90 bp GGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTAAACTCAACTGGTTCTaGTGGTGTAAGTCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GICRGAVARTWLCTAGKAKLNWF*WCKSAK
Trigger: TTTTGCCGACTTACACCAGCAGAACCAGTTGAGTTT...AGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR GCA 90 bp AGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTAACGTAGGTCACAGGTaGAAGGGATGCTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RGVSLLLSSLSRLPSLFRNVGHR*KGCCLH
Trigger: GTGAAGACAGCATCCCTTGCACCTGTGACCTACGTT...ACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp TTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCGGTGTTGACGAGGCTTaGATAGATTCTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LQFSPTLHPDNPSAAECCGVDEA*IDSPQC
Trigger: GCACTGGGGAGAATCTATGCAAGCCTCGTCAACACC...GCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp AGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTCAGCAGCTGAATGCTaGAAAGTGGTGTTGACGAGG +
Preference number: 4 (lower is better)
Translates to: RGVSLLLSSLSRLPSLFRSAAEC*KVVLTR
Trigger: CCTCGTCAACACCACTTTGCAGCATTCAGCTGCTGA...ACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp TTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCCCCTCAGCAGCTGAATaGTGCAAAGTGGTGTTGACG +
Preference number: 4 (lower is better)
Translates to: LQFSPTLHPDNPSAAECCPSAAE*CKVVLT
Trigger: CGTCAACACCACTTTGCAGCATTCAGCTGCTGAGGG...GCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp AAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCAGTTCTGCCTCTGAACTaGTGGTCCAACTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: KCLVHMSSLDPDIWMALAVLPLN*WSNWFL
Trigger: GAGGAACCAGTTGGACCAGCAGTTCAGAGGCAGAAC...TGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR GCA 90 bp TTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCGTTCTGCCTCTGAACTaGTGGTCCAACTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LQFSPTLHPDNPSAAECCVLPLN*WSNWFL
Trigger: GAGGAACCAGTTGGACCAGCAGTTCAGAGGCAGAAC...GCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR GCA 90 bp CCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCTTGTTGCTATAAGCGCTTaGCTCCTCCAAGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: PFTPFLHLLGPAILRAHLVAISA*LLQAVL
Trigger: CAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAAC...AAGATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR GCA 90 bp GGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGGCTGCTCCAGCTCCTaGCATCATTATGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: GCSFLLLSIPIIPQQLNAGCSSS*HHYVCI
Trigger: GATGCAGACATAATGATGGCAGGAGCTGGAGCAGCC...AGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484425.6
ENST00000485070.5
CDS-3UTR GCA 90 bp TTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCGGCTGCTCCAGCTCCTaGCATCATTATGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LQFSPTLHPDNPSAAECCGCSSS*HHYVCI
Trigger: GATGCAGACATAATGATGGCAGGAGCTGGAGCAGCC...GCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484425.6
ENST00000485070.5
CDS-3UTR GCA 90 bp CAGCTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCTTCAGATCACACCCCTaGTCCAGCACCTGTTATAGC +
Preference number: 4 (lower is better)
Translates to: QLERLCCHREMTLFFLGCFRSHP*SSTCYS
Trigger: GCTATAACAGGTGCTGGAGCAGGGGTGTGATCTGAA...GCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCAGGGAAGGGAAGGTTaGATAGGATCTTGTGACTTT +
Preference number: 4 (lower is better)
Translates to: DLGPCLCELFVAISACLLQGREG*IGSCDF
Trigger: AAAGTCACAAGATCCTATCCAACCTTCCCTTCCCTG...GAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471558.5
CDS-3UTR CCA 90 bp AGGGAAATGGAAGGTGTCTGGCAGTTCACATTTGTCCAGAATGGTCTGAGCAGGTCACCCCCAGGGCCATaGTGTTGGAAGCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: REMEGVWQFTFVQNGLSRSPPGP*CWKLCR
Trigger: TCTACAAAGCTTCCAACACCATGGCCCTGGGGGTGA...CCTGCTCAGACCATTCTGGACAAATGTGAACTGCCAGACACCTTCCATTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315184.9
ENST00000621392.4
CDS-3UTR CCA 90 bp GGGTTCTCTCTTTCCCACTCTCCGTACGTGAATGAAGCCCTCCAACGTAGGTCAAGATGTTGGGGGCTATaGATGGTCTGTTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: GFSLSHSPYVNEALQRRSRCWGL*MVCSMS
Trigger: AGACATGGAACAGACCATCCATAGCCCCCAACATCT...TGACCTACGTTGGAGGGCTTCATTCACGTACGGAGAGTGGGAAAGAGAGAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CCA 90 bp AGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTAGTCGGATCCAGAAGTaGAAGACAGTCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: RGVSLLLSSLSRLPSLFRSRIQK*KTVSGW
Trigger: CCATCCTGAGACTGTCTTCCACTTCTGGATCCGACT...ACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTAGTCGGATCCAGAAGTaGAAGACAGTCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: SLRALRCYKRLPPPSCTGSRIQK*KTVSGW
Trigger: CCATCCTGAGACTGTCTTCCACTTCTGGATCCGACT...ACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp TTCCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATAGTCGGATCCAGAAGTaGAAGACAGTCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: FPFTPFLHLLGPAILRAHSRIQK*KTVSGW
Trigger: CCATCCTGAGACTGTCTTCCACTTCTGGATCCGACT...ATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCTTCTGGGCTGGGAGGCTTaGAGTTTCTTCTGTACTAAC +
Preference number: 4 (lower is better)
Translates to: PFTPFLHLLGPAILRAHLLGWEA*SFFCTN
Trigger: GTTAGTACAGAAGAAACTCCAAGCCTCCCAGCCCAG...AAGATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTAAGACTCTCGCTGGGCTaGGAGGCTTGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VSLLLSSLSRLPSLFRFLRLSLG*EAWSFF
Trigger: GAAGAAACTCCAAGCCTCCCAGCCCAGCGAGAGTCT...TAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GTACAGCTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTGCAGTGGCGAGGACGTaGTTATGTACAGCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: VQLERLCCHREMTLFFLGAVART*LCTAGK
Trigger: CTTTCCAGCTGTACATAACCACGTCCTCGCCACTGC...ACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCGCTCTGGCAGTGGCATaGAGGTGGCATATGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SCPPYLVYQVSSVSYYHFALAVA*RWHMPR
Trigger: CCTCGGCATATGCCACCTCCATGCCACTGCCAGAGC...GAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp ATTCTTCCTTGGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCATGTGGCTTTGAGCTCTaGGTCCTCAGGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ILPWLQFSPTLHPDNPSACGFEL*VLRWLL
Trigger: GAGCAGCCACCTGAGGACCCAGAGCTCAAAGCCACA...TGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACCAAGGAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484425.6
ENST00000485070.5
CDS-3UTR CCA 90 bp CTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTATGTGGCTTTGAGCTCTaGGTCCTCAGGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LCCHREMTLFFLGCSFLLCGFEL*VLRWLL
Trigger: GAGCAGCCACCTGAGGACCCAGAGCTCAAAGCCACA...TAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484425.6
ENST00000485070.5
CDS-3UTR CCA 90 bp GGGTTCTCTCTTTCCCACTCTCCGTACGTGAATGAAGCCCTCCAACGTAGGTCAAACTGGTTCCTCAACTaGTTCTGCTGGTGTAAGTCG +
Preference number: 4 (lower is better)
Translates to: GFSLSHSPYVNEALQRRSNWFLN*FCWCKS
Trigger: CGACTTACACCAGCAGAACCAGTTGAGGAACCAGTT...TGACCTACGTTGGAGGGCTTCATTCACGTACGGAGAGTGGGAAAGAGAGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR TCA 90 bp TGCAGTCAGAGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATATTGAATTCTGGAGAATaGACCACCCGGCAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: CSQSNDLGPCLCELFVAILNSGE*TTRQSS
Trigger: ACTGCTCTGCCGGGTGGTTCATTCTCCAGAATTCAA...TATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471558.5
CDS-3UTR TCA 90 bp AGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTCCCTTTTGCAGAATTTaGACCAGTCGGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RGVSLLLSSLSRLPSLFRPFCRI*TSRIQK
Trigger: CTTCTGGATCCGACTGGTTCAAATTCTGCAAAAGGG...ACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp AAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCAAAGTCGGCAAAAATCTaGGACAGGGCTTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: KCLVHMSSLDPDIWMALAKSAKI*DRASLS
Trigger: GGAGAGTGAAGCCCTGTCTCAGATTTTTGCCGACTT...TGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR TCA 90 bp CTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTACCCACTCTCCGTACGTaGATGAAGCCCTCCAACGTA +
Preference number: 4 (lower is better)
Translates to: LCCHREMTLFFLGCSFLLPTLRT*MKPSNV
Trigger: TACGTTGGAGGGCTTCATTCACGTACGGAGAGTGGG...TAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp CAGAGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTAATTTGTTCTGCCTCTaGACTGCTGGTCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: QSNDLGPCLCELFVAISANLFCL*TAGPTG
Trigger: ACCAGTTGGACCAGCAGTTCAGAGGCAGAACAAATT...AGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR GCA 90 bp AAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCATTCCATGTCTGGTTCTaGCCCTGGTGCCATTTGACA +
Preference number: 4 (lower is better)
Translates to: KCLVHMSSLDPDIWMALAFHVWF*PWCHLT
Trigger: TGTCAAATGGCACCAGGGGCAGAACCAGACATGGAA...TGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR GCA 90 bp TTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCTTCCATGTCTGGTTCTaGCCCTGGTGCCATTTGACA +
Preference number: 4 (lower is better)
Translates to: LQFSPTLHPDNPSAAECCFHVWF*PWCHLT
Trigger: TGTCAAATGGCACCAGGGGCAGAACCAGACATGGAA...GCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp TGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTTTGGGTACCAGGCAGTaGGTGACAAGAATCCTAGGG +
Preference number: 4 (lower is better)
Translates to: CVPSLVLLISSTKSLPFPLGTRQ*VTRILG
Trigger: CCCTAGGATTCTTGTCACGCACTGCCTGGTACCCAA...AGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp GTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTGGGTACCAGGCAGTaGGTGACAAGAATCCTAGGG +
Preference number: 4 (lower is better)
Translates to: VSLLLSSLSRLPSLFRFLLGTRQ*VTRILG
Trigger: CCCTAGGATTCTTGTCACGCACTGCCTGGTACCCAA...TAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp TCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCACAGGTGCAAGGGATaGTGTCTTCACGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SQGCVPSLVLLISSTKSLHRCKG*CLHGKN
Trigger: ATTCTTCCCGTGAAGACAGCATCCCTTGCACCTGTG...AAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp TCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTAACGTAGGTCACAGGTaGAAGGGATGCTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SQGCVPSLVLLISSTKSLNVGHR*KGCCLH
Trigger: GTGAAGACAGCATCCCTTGCACCTGTGACCTACGTT...AAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp GGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTTCAGCAGCTGAATGCTaGAAAGTGGTGTTGACGAGG +
Preference number: 4 (lower is better)
Translates to: GCSFLLLSIPIIPQQLNASAAEC*KVVLTR
Trigger: CCTCGTCAACACCACTTTGCAGCATTCAGCTGCTGA...AGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp TCTAAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGCAGCTGGAAAGGCTCTaGTGTCACCGTGAGATGACT +
Preference number: 4 (lower is better)
Translates to: SKCLVHMSSLDPDIWMALQLERL*CHREMT
Trigger: AGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTG...CAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR GCA 90 bp CTCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTCTCCTCAACTGGTTCTaGTGGTGTAAGTCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LSGVCPFSCPPYLVYQVSLLNWF*WCKSAK
Trigger: TTTTGCCGACTTACACCAGCAGAACCAGTTGAGGAG...AGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTACCAGGGCCATGGTGTTaGAAGCTTTGTAGACGTCTC +
Preference number: 4 (lower is better)
Translates to: VSLLLSSLSRLPSLFRFLPGPWC*KLCRRL
Trigger: GAGACGTCTACAAAGCTTCCAACACCATGGCCCTGG...TAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp ATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCACTATTTTCATTTCCAGTCTGGTTCTGCCCCTaGTGCCATTTGACACTGGCC +
Preference number: 4 (lower is better)
Translates to: MSSLDPDIWMALALFSFPVWFCP*CHLTLA
Trigger: GGCCAGTGTCAAATGGCACCAGGGGCAGAACCAGAC...TGGAAATGAAAATAGTGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp ATTCTTCCTTGGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGGTCTGTTCCATGTCTaGTTCTGCCCCTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: ILPWLQFSPTLHPDNPSAGLFHV*FCPWCH
Trigger: ATGGCACCAGGGGCAGAACCAGACATGGAACAGACC...TGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACCAAGGAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp AGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCAGATGTTGGGGGCTATaGATGGTCTGTTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: SNDLGPCLCELFVAISACRCWGL*MVCSMS
Trigger: AGACATGGAACAGACCATCCATAGCCCCCAACATCT...GCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp AGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTAGATGTTGGGGGCTATaGATGGTCTGTTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: RGVSLLLSSLSRLPSLFRRCWGL*MVCSMS
Trigger: AGACATGGAACAGACCATCCATAGCCCCCAACATCT...ACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCAAGACAGTCTCAGGATaGTCAGGATGGAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LRGVSLLLSSLSRLPSLFKTVSG*SGWSFR
Trigger: CCTAAAGCTCCATCCTGACCATCCTGAGACTGTCTT...GAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GACGAGGCTTGCATAGATTCTCCCCAGTGCGGAAGGGTGGCTCAAATAGAATTTAGTCGGATCCAGAAGTaGAAGACAGTCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: DEACIDSPQCGRVAQIEFSRIQK*KTVSGW
Trigger: CCATCCTGAGACTGTCTTCCACTTCTGGATCCGACT...AAATTCTATTTGAGCCACCCTTCCGCACTGGGGAGAATCTATGCAAGCCTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CCA 90 bp GTACAGCTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTCTGGGCTGGGAGGCTTaGAGTTTCTTCTGTACTAAC +
Preference number: 4 (lower is better)
Translates to: VQLERLCCHREMTLFFLGLGWEA*SFFCTN
Trigger: GTTAGTACAGAAGAAACTCCAAGCCTCCCAGCCCAG...ACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TGCAGTCAGAGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATACTGGGCTGGGAGGCTTaGAGTTTCTTCTGTACTAAC +
Preference number: 4 (lower is better)
Translates to: CSQSNDLGPCLCELFVAILGWEA*SFFCTN
Trigger: GTTAGTACAGAAGAAACTCCAAGCCTCCCAGCCCAG...TATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp TGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTACTCAGACTCTCGCTGGGCTaGGAGGCTTGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CCHREMTLFFLGCSFLLLRLSLG*EAWSFF
Trigger: GAAGAAACTCCAAGCCTCCCAGCCCAGCGAGAGTCT...GAGTAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GGCTTGCATAGATTCTCCCCAGTGCGGAAGGGTGGCTCAAATAGAATTTCCTATGCAGTGGCGAGGACGTaGTTATGTACAGCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GLHRFSPVRKGGSNRISYAVART*LCTAGK
Trigger: CTTTCCAGCTGTACATAACCACGTCCTCGCCACTGC...ATAGGAAATTCTATTTGAGCCACCCTTCCGCACTGGGGAGAATCTATGCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CCA 90 bp GTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTAGCAGTGGCGAGGACGTaGTTATGTACAGCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: VSLLLSSLSRLPSLFRFLAVART*LCTAGK
Trigger: CTTTCCAGCTGTACATAACCACGTCCTCGCCACTGC...TAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CTGCAAAGTGGTGTTGACGAGGCTTGCATAGATTCTCCCCAGTGCGGAAGGGTGCACATTTGTCCAGAATaGTCTGAGCAGGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: LQSGVDEACIDSPQCGRVHICPE*SEQGRK
Trigger: TTTTCTTCCCTGCTCAGACCATTCTGGACAAATGTG...CACCCTTCCGCACTGGGGAGAATCTATGCAAGCCTCGTCAACACCACTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315184.9
ENST00000621392.4
CDS-3UTR CCA 90 bp CAGAGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTAACTGGTTCCTCAACTaGTTCTGCTGGTGTAAGTCG +
Preference number: 4 (lower is better)
Translates to: QSNDLGPCLCELFVAISANWFLN*FCWCKS
Trigger: CGACTTACACCAGCAGAACCAGTTGAGGAACCAGTT...AGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR TCA 90 bp AAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCACCCTTTTGCAGAATTTaGACCAGTCGGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KCLVHMSSLDPDIWMALAPFCRI*TSRIQK
Trigger: CTTCTGGATCCGACTGGTTCAAATTCTGCAAAAGGG...TGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR TCA 90 bp CACTCTCCGTACGTGAATGAAGCCCTCCAACGTAGGTCACAGGTGCAAGGGATGAATAAATCTTCTCAGTaGCTGTCCTCAACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HSPYVNEALQRRSQVQGMNKSSQ*LSSTLQ
Trigger: CTGAAGAGTTGAGGACAGTCACTGAGAAGATTTATT...CATCCCTTGCACCTGTGACCTACGTTGGAGGGCTTCATTCACGTACGGAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR GCA 90 bp TGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTTTCCATGTCTGGTTCTaGCCCTGGTGCCATTTGACA +
Preference number: 4 (lower is better)
Translates to: CVPSLVLLISSTKSLPFPFHVWF*PWCHLT
Trigger: TGTCAAATGGCACCAGGGGCAGAACCAGACATGGAA...AGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp CTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCTCCTCAACTGCAGGATaGGTTGATAGTGGTCACATA +
Preference number: 4 (lower is better)
Translates to: LRGVSLLLSSLSRLPSLFSSTAG*VDSGHI
Trigger: TATGTGACCACTATCAACGCATCCTGCAGTTGAGGA...GAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR GCA 90 bp GCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTACCAGTGAATCTCCTGAGGGGCTaGTGCAGTTCTTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: AISACLLQAVLVFSLLPVNLLRG*CSSWVP
Trigger: TGGTACCCAAGAACTGCAGCAGCCCCTCAGGAGATT...CACTGGTAATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR GCA 90 bp ATTCTTCCTTGGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAAATCTCCTGAGGGGCTaGTGCAGTTCTTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: ILPWLQFSPTLHPDNPSANLLRG*CSSWVP
Trigger: TGGTACCCAAGAACTGCAGCAGCCCCTCAGGAGATT...TGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACCAAGGAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTACCAGTGCCAGGGCCATGGTGTTaGAAGCTTTGTAGACGTCTC +
Preference number: 4 (lower is better)
Translates to: AISACLLQAVLVFSLLPVPGPWC*KLCRRL
Trigger: GAGACGTCTACAAAGCTTCCAACACCATGGCCCTGG...CACTGGTAATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp CTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTATCACCCCCAGGGCCATaGTGTTGGAAGCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LCCHREMTLFFLGCSFLLSPPGP*CWKLCR
Trigger: TCTACAAAGCTTCCAACACCATGGCCCTGGGGGTGA...TAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTACCAGGTCTGTTCCATGTCTaGTTCTGCCCCTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: VAISACLLQAVLVFSLLPGLFHV*FCPWCH
Trigger: ATGGCACCAGGGGCAGAACCAGACATGGAACAGACC...TGGTAATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp AGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCAAAGGTTGGGGGCTATGGATaGTCTGTTCCATGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SFLLLSIPIIPQQLNAAKVGGYG*SVPCLV
Trigger: AACCAGACATGGAACAGACCATCCATAGCCCCCAAC...CTTTGCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTTCTTCAGGAAGATGTTaGGGGCTATGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GCSFLLLSIPIIPQQLNASSGRC*GLWMVC
Trigger: ACAGACCATCCATAGCCCCCAACATCTTCCTGAAGA...AGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTAAGACAGTCTCAGGATaGTCAGGATGGAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GCSFLLLSIPIIPQQLNAKTVSG*SGWSFR
Trigger: CCTAAAGCTCCATCCTGACCATCCTGAGACTGTCTT...AGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp AAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCAAAGACAGTCTCAGGATaGTCAGGATGGAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: KCLVHMSSLDPDIWMALAKTVSG*SGWSFR
Trigger: CCTAAAGCTCCATCCTGACCATCCTGAGACTGTCTT...TGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp CTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTAGACTCTCGCTGGGCTaGGAGGCTTGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRCYKRLPPPSCTGFQFIRLSLG*EAWSFF
Trigger: GAAGAAACTCCAAGCCTCCCAGCCCAGCGAGAGTCT...AATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp CAGAGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTCTCAACTGGTTCTGCTaGTGTAAGTCGGCAAAAATC +
Preference number: 4 (lower is better)
Translates to: QSNDLGPCLCELFVAISALNWFC*CKSAKI
Trigger: GATTTTTGCCGACTTACACCAGCAGAACCAGTTGAG...AGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp TTCCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATACCTGTTATAGCTCCTaGCTCAGTAAACCAACTTCC +
Preference number: 4 (lower is better)
Translates to: FPFTPFLHLLGPAILRAHTCYSS*LSKPTS
Trigger: GGAAGTTGGTTTACTGAGCCAGGAGCTATAACAGGT...ATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR CAA 72 bp TTTCGATATGCTCAAGGGTGCAGTCAGAGCAATGACTaGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATA +
Preference number: 4 (lower is better)
Translates to: FRYAQGCSQSND*GPCLCELFVAI
Trigger: TATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACTGCACCCTTGAGCATATCGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR TCA 90 bp CCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCTTAATAAATCTTCTCAGTaGCTGTCCTCAACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PFTPFLHLLGPAILRAHLNKSSQ*LSSTAG
Trigger: TCCTGCAGTTGAGGACAGTCACTGAGAAGATTTATT...AAGATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR TCA 90 bp CTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTAGCTGCAAAGTGGTGTTaGCGAGGCTTGCATAGATTC +
Preference number: 4 (lower is better)
Translates to: LCCHREMTLFFLGCSFLLAAKWC*RGLHRF
Trigger: GAATCTATGCAAGCCTCGTCAACACCACTTTGCAGC...TAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp TTCCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATTTGTCCAGAATGGTCTaGGCAGGGAAGAAAACATTT +
Preference number: 4 (lower is better)
Translates to: FPFTPFLHLLGPAILRAHLSRMV*AGKKTF
Trigger: AAATGTTTTCTTCCCTGCTCAGACCATTCTGGACAA...ATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315184.9
ENST00000621392.4
CDS-3UTR TCA 90 bp CAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCAAATCCATTTTACAGATCTaGAGACTGAGCCCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: QFSPTLHPDNPSAAECCKSILQI*RLSPQV
Trigger: AACCTGGGGGCTCAGTCTTCAGATCTGTAAAATGGA...TTTGCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR GCA 90 bp TGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTACTCCAACATTTCTACACATaGTCAGGGGCCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: CCHREMTLFFLGCSFLLLQHFYT*SGACCT
Trigger: TGTGCAGCAGGCCCCTGAGCATGTGTAGAAATGTTG...GAGTAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR GCA 90 bp AAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCATCCTCAACTGCAGGATaGGTTGATAGTGGTCACATA +
Preference number: 4 (lower is better)
Translates to: KCLVHMSSLDPDIWMALASSTAG*VDSGHI
Trigger: TATGTGACCACTATCAACGCATCCTGCAGTTGAGGA...TGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471558.5
CDS-3UTR GCA 90 bp CTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTACACAGGTGCAAGGGATaGTGTCTTCACGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: LCCHREMTLFFLGCSFLLHRCKG*CLHGKN
Trigger: ATTCTTCCCGTGAAGACAGCATCCCTTGCACCTGTG...TAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp GGGTTCTCTCTTTCCCACTCTCCGTACGTGAATGAAGCCCTCCAACGTAGGTCACCACATCCTTTGGTTTaGATTTCCCTGGAAATAACA +
Preference number: 4 (lower is better)
Translates to: GFSLSHSPYVNEALQRRSPHPLV*ISLEIT
Trigger: TGTTATTTCCAGGGAAATGCAAACCAAAGGATGTGG...TGACCTACGTTGGAGGGCTTCATTCACGTACGGAGAGTGGGAAAGAGAGAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR GCA 90 bp TGCAGTCAGAGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATATTCCTCAACTGGTTCTaGTGGTGTAAGTCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: CSQSNDLGPCLCELFVAIFLNWF*WCKSAK
Trigger: TTTTGCCGACTTACACCAGCAGAACCAGTTGAGGAA...TATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR GCA 90 bp TTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCACTATTTGTTGCTATAAGCGCTTaGCTCCTCCAAGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: LVHMSSLDPDIWMALALFVAISA*LLQAVL
Trigger: CAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAAC...AAATAGTGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR GCA 90 bp CAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCAAACTCCTCAACTGGTTCTaGTGGTGTAAGTCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QFSPTLHPDNPSAAECCKLLNWF*WCKSAK
Trigger: TTTTGCCGACTTACACCAGCAGAACCAGTTGAGGAG...TTTGCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp TTCCCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCCACATCCTTTGGTTTaGATTTCCCTGGAAATAACC +
Preference number: 4 (lower is better)
Translates to: FPFTPFLHLLGPAILRAHPHPLV*ISLEIT
Trigger: GGTTATTTCCAGGGAAATGCAAACCAAAGGATGTGG...ATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621392.4
CDS-3UTR CCA 90 bp CCTTGGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAACAGGGAAGGGAAGGTTaGATAGGATCTTGTGACTTT +
Preference number: 4 (lower is better)
Translates to: PWLQFSPTLHPDNPSAAEQGREG*IGSCDF
Trigger: AAAGTCACAAGATCCTATCCAACCTTCCCTTCCCTG...TTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR CCA 90 bp TTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCCTCCACAAACCTCAATaGGAGAATCCTCTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LQFSPTLHPDNPSAAECCLHKPQ*ENPLQE
Trigger: TTCCTGAAGAGGATTCTCCCATTGAGGTTTGTGGAG...GCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR CCA 90 bp GAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTCTCAACTGGTTCTGCTaGTGTAAGTCGGCAAAAATC +
Preference number: 4 (lower is better)
Translates to: ELFVAISACLLQAVLVFSLNWFC*CKSAKI
Trigger: GATTTTTGCCGACTTACACCAGCAGAACCAGTTGAG...ACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp GTACAGCTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTCTCAACTGGTTCTGCTaGTGTAAGTCGGCAAAAATC +
Preference number: 4 (lower is better)
Translates to: VQLERLCCHREMTLFFLGLNWFC*CKSAKI
Trigger: GATTTTTGCCGACTTACACCAGCAGAACCAGTTGAG...ACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp ATTCTTCCTTGGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCACCCTTTTGCAGAATTTaGACCAGTCGGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: ILPWLQFSPTLHPDNPSAPFCRI*TSRIQK
Trigger: CTTCTGGATCCGACTGGTTCAAATTCTGCAAAAGGG...TGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACCAAGGAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp CTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCAAAGTCGGCAAAAATCTaGGACAGGGCTTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: LLLSSLSRLPSLFRFLLPKSAKI*DRASLS
Trigger: GGAGAGTGAAGCCCTGTCTCAGATTTTTGCCGACTT...TGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp GCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTACCAGTGTCCATTTTACAGATCTaGAGACTGAGCCCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: AISACLLQAVLVFSLLPVSILQI*RLSPQV
Trigger: AACCTGGGGGCTCAGTCTTCAGATCTGTAAAATGGA...CACTGGTAATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR GCA 90 bp TCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTTCCATGTCTGGTTCTaGCCCTGGTGCCATTTGACA +
Preference number: 4 (lower is better)
Translates to: SCPPYLVYQVSSVSYYHFFHVWF*PWCHLT
Trigger: TGTCAAATGGCACCAGGGGCAGAACCAGACATGGAA...GAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp TCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCTTTAATCTCCTGAGGGGCTaGTGCAGTTCTTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: SSLSRLPSLFRFLLPLLFNLLRG*CSSWVP
Trigger: TGGTACCCAAGAACTGCAGCAGCCCCTCAGGAGATT...AAAGAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR GCA 90 bp GTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTACCATCAGCAGCTGAATGCTaGAAAGTGGTGTTGACGAGG +
Preference number: 4 (lower is better)
Translates to: VAISACLLQAVLVFSLLPSAAEC*KVVLTR
Trigger: CCTCGTCAACACCACTTTGCAGCATTCAGCTGCTGA...TGGTAATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR GCA 90 bp CTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCCACATCCTTTGGTTTaGATTTCCCTGGAAATAACA +
Preference number: 4 (lower is better)
Translates to: LRGVSLLLSSLSRLPSLFPHPLV*ISLEIT
Trigger: TGTTATTTCCAGGGAAATGCAAACCAAAGGATGTGG...GAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484425.6
ENST00000485070.5
CDS-3UTR CCA 90 bp TCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCTTTCCAGGGCCATGGTGTTaGAAGCTTTGTAGACGTCTC +
Preference number: 4 (lower is better)
Translates to: SSLSRLPSLFRFLLPLLFPGPWC*KLCRRL
Trigger: GAGACGTCTACAAAGCTTCCAACACCATGGCCCTGG...AAAGAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTGTTGGGGGCTATGGATaGTCTGTTCCATGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LRCYKRLPPPSCTGFQFIVGGYG*SVPCLV
Trigger: AACCAGACATGGAACAGACCATCCATAGCCCCCAAC...AATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp TTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCACTATTTTCTTCAGGAAGATGTTaGGGGCTATGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVHMSSLDPDIWMALALFSSGRC*GLWMVC
Trigger: ACAGACCATCCATAGCCCCCAACATCTTCCTGAAGA...AAATAGTGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp ATTCTTCCTTGGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAAAGACAGTCTCAGGATaGTCAGGATGGAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: ILPWLQFSPTLHPDNPSAKTVSG*SGWSFR
Trigger: CCTAAAGCTCCATCCTGACCATCCTGAGACTGTCTT...TGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACCAAGGAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp AGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTCAACTGGTTCTGCTaGTGTAAGTCGGCAAAAATC +
Preference number: 4 (lower is better)
Translates to: RLCCHREMTLFFLGCSFLLNWFC*CKSAKI
Trigger: GATTTTTGCCGACTTACACCAGCAGAACCAGTTGAG...GAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp GGTTGCAGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTCACATTTGTCCAGAATaGTCTGAGCAGGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GCSFLLLSIPIIPQQLNAHICPE*SEQGRK
Trigger: TTTTCTTCCCTGCTCAGACCATTCTGGACAAATGTG...AGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACTGCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315184.9
ENST00000621392.4
3UTR CAA 72 bp TCTTCACGGGAAGAATCTTTCCCTGAGCTGTTCTTGTaGGTCTCCACCTTTCTGCTGCTCAATTTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: SSREESFPELFL*VSTFLLLNLPL
Trigger: TAGAGGCAAATTGAGCAGCAGAAAGGTGGAGACCAACAAGAACAGCTCAGGGAAAGATTCTTCCCGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR TCA 90 bp TCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCGCTGTCACCGTGAGATaGCTCTATTCTTCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SCPPYLVYQVSSVSYYHFAVTVR*LYSSLV
Trigger: AACCAAGGAAGAATAGAGTCATCTCACGGTGACAGC...GAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp GTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTGTCCAGAATGGTCTaGGCAGGGAAGAAAACATTT +
Preference number: 4 (lower is better)
Translates to: VSLLLSSLSRLPSLFRFLLSRMV*AGKKTF
Trigger: AAATGTTTTCTTCCCTGCTCAGACCATTCTGGACAA...TAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315184.9
ENST00000621392.4
CDS-3UTR TCA 90 bp TCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCAATTTGTTCTGCCTCTaGACTGCTGGTCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: SCPPYLVYQVSSVSYYHFNLFCL*TAGPTG
Trigger: ACCAGTTGGACCAGCAGTTCAGAGGCAGAACAAATT...GAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CCA 90 bp CTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTACTGCCCCTTTTGACCTaGATGAAGTTGCTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: LCCHREMTLFFLGCSFLLLPLLT*MKLLSN
Trigger: GTTTGAAAGCAACTTCATCCAGGTCAAAAGGGGCAG...TAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR CCA 90 bp TTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCAGATGTTGGGGGCTATaGATGGTCTGTTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LSSLSRLPSLFRFLLPLLRCWGL*MVCSMS
Trigger: AGACATGGAACAGACCATCCATAGCCCCCAACATCT...GAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCTCTTCAGGAAGATGTTaGGGGCTATGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSSLSRLPSLFRFLLPLLSSGRC*GLWMVC
Trigger: ACAGACCATCCATAGCCCCCAACATCTTCCTGAAGA...GAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCACTATTTCTCCACAAACCTCAATaGGAGAATCCTCTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LVHMSSLDPDIWMALALFLHKPQ*ENPLQE
Trigger: TTCCTGAAGAGGATTCTCCCATTGAGGTTTGTGGAG...AAATAGTGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471558.5
CDS-3UTR CCA 90 bp GAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTTCCTCCAAGCTGTACTaGTTTTCAGTTTATTACCAG +
Preference number: 4 (lower is better)
Translates to: ELFVAISACLLQAVLVFSSSKLY*FSVYYQ
Trigger: CTGGTAATAAACTGAAAACCAGTACAGCTTGGAGGA...ACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp TCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTACATCTGGATGGCGTTaGCACTATTTTCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: SQGCVPSLVLLISSTKSLTSGWR*HYFHFH
Trigger: ATGGAAATGAAAATAGTGCCAACGCCATCCAGATGT...AAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CCA 90 bp CCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCTTTGTGTATCAGTCCTTCCCTCTaGTCATTCAGATCACACCCC +
Preference number: 4 (lower is better)
Translates to: PYLVYQVSSVSYYHFSLCISPSL*SFRSHP
Trigger: GGGGTGTGATCTGAATGACCAGAGGGAAGGACTGAT...ACACAAAGAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485070.5
ENST00000621392.4
CDS-3UTR TCA 90 bp TCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCTTTCCCTTTTGCAGAATTTaGACCAGTCGGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSLSRLPSLFRFLLPLLFPFCRI*TSRIQK
Trigger: CTTCTGGATCCGACTGGTTCAAATTCTGCAAAAGGG...AAAGAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCAAAACAGGTTGAATTCTaGAGAATGAACCACCCGGCA +
Preference number: 4 (lower is better)
Translates to: LLLSSLSRLPSLFRFLLPKQVEF*RMNHPA
Trigger: TGCCGGGTGGTTCATTCTCCAGAATTCAACCTGTTT...TGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR CCA 90 bp ATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCACTATTTTCATTTCCAAAACAGGTTGAATTCTaGAGAATGAACCACCCGGCA +
Preference number: 4 (lower is better)
Translates to: MSSLDPDIWMALALFSFPKQVEF*RMNHPA
Trigger: TGCCGGGTGGTTCATTCTCCAGAATTCAACCTGTTT...TGGAAATGAAAATAGTGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471558.5
CDS-3UTR CCA 90 bp CTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTACCTGTTATAGCTCCTaGCTCAGTAAACCAACTTCC +
Preference number: 4 (lower is better)
Translates to: LRCYKRLPPPSCTGFQFITCYSS*LSKPTS
Trigger: GGAAGTTGGTTTACTGAGCCAGGAGCTATAACAGGT...AATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CCA 90 bp TTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCACCTGTTATAGCTCCTaGCTCAGTAAACCAACTTCC +
Preference number: 4 (lower is better)
Translates to: LSSLSRLPSLFRFLLPLLTCYSS*LSKPTS
Trigger: GGAAGTTGGTTTACTGAGCCAGGAGCTATAACAGGT...GAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR CAA 72 bp CTGTTCTTGTTGGTCTCCACCTTTCTGCTGCTCAATTaGCCTCTAAATCTGCTGAGTAGCATTCTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LFLLVSTFLLLN*PLNLLSSILSA
Trigger: AGCACTTAGAATGCTACTCAGCAGATTTAGAGGCAAATTGAGCAGCAGAAAGGTGGAGACCAACAAGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR TCA 90 bp CTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTAAATAAATCTTCTCAGTaGCTGTCCTCAACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LCCHREMTLFFLGCSFLLNKSSQ*LSSTLQ
Trigger: CTGAAGAGTTGAGGACAGTCACTGAGAAGATTTATT...TAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp CCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCTTTGTGTCTCAACTGGTTCTGCTaGTGTAAGTCGGCAAAAATC +
Preference number: 4 (lower is better)
Translates to: PYLVYQVSSVSYYHFSLCLNWFC*CKSAKI
Trigger: GATTTTTGCCGACTTACACCAGCAGAACCAGTTGAG...ACACAAAGAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CCA 90 bp TTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCACTATTTACATCTGGATGGCGTTaGCACTATTTTCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: LVHMSSLDPDIWMALALFTSGWR*HYFHFH
Trigger: ATGGAAATGAAAATAGTGCCAACGCCATCCAGATGT...AAATAGTGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CCA 90 bp CTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCATCCTCCAAGCTGTACTaGTTTTCAGTTTATTACCAG +
Preference number: 4 (lower is better)
Translates to: LLLSSLSRLPSLFRFLLPSSKLY*FSVYYQ
Trigger: CTGGTAATAAACTGAAAACCAGTACAGCTTGGAGGA...TGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR TCA 90 bp TCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCTTTAATAAATCTTCTCAGTaGCTGTCCTCAACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SSLSRLPSLFRFLLPLLFNKSSQ*LSSTLQ
Trigger: CTGAAGAGTTGAGGACAGTCACTGAGAAGATTTATT...AAAGAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
3UTR CAA 72 bp CATATGAGCTCATTGGATCCTGACATCTGGATGGCGTaGGCACTATTTTCATTTCCATTTTACAGATCTGAA +
Preference number: 4 (lower is better)
Translates to: HMSSLDPDIWMA*ALFSFPFYRSE
Trigger: TTCAGATCTGTAAAATGGAAATGAAAATAGTGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CAA 90 bp CTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTCCTTTCCTTCATCTCTaGGGCCCGGCCATTCTGAGA +
Preference number: 5 (lower is better)
Translates to: LAVAWRWHMPRCSGEDVVPFLHL*GPAILR
Trigger: TCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGG...AACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp CCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTGTCTGCCCCTGGTGCCATTaGACACTGGCCATGAGTAGG +
Preference number: 5 (lower is better)
Translates to: PRCSGEDVVMYSWKGSAVCPWCH*TLAMSR
Trigger: CCTACTCATGGCCAGTGTCAAATGGCACCAGGGGCA...GACAGCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp CTGCAAAGTGGTGTTGACGAGGCTTGCATAGATTCTCCCCAGTGCGGAAGGGTGGGGCTGCTGCAGTTCTaGGGTACCAGGCAGTGCGTG +
Preference number: 5 (lower is better)
Translates to: LQSGVDEACIDSPQCGRVGLLQF*GTRQCV
Trigger: CACGCACTGCCTGGTACCCAAGAACTGCAGCAGCCC...CACCCTTCCGCACTGGGGAGAATCTATGCAAGCCTCGTCAACACCACTTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp CTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCAGGGCCTGCTGCACATTaGTCCTGGGATCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: LGPMSLRALRCYKRLPPPGPAAH*SWDLCL
Trigger: GAGACAGAGATCCCAGGACAAATGTGCAGCAGGCCC...TGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471558.5
CDS-3UTR CAA 90 bp CTCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTGGGCTGCTGCAGTTCTaGGGTACCAGGCAGTGCGTG +
Preference number: 5 (lower is better)
Translates to: LSGVCPFSCPPYLVYQVSGLLQF*GTRQCV
Trigger: CACGCACTGCCTGGTACCCAAGAACTGCAGCAGCCC...AGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp GGCTGCAGGCCGGAGGGGTTCTCTCTTTCCCACTCTCCGTACGTGAATGAAGCCTTCCCTGAGCTGTTCTaGTTGGTCTCCACCTTTCTG +
Preference number: 5 (lower is better)
Translates to: GCRPEGFSLSHSPYVNEAFPELF*LVSTFL
Trigger: CAGAAAGGTGGAGACCAACAAGAACAGCTCAGGGAA...GGCTTCATTCACGTACGGAGAGTGGGAAAGAGAGAACCCCTCCGGCCTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CAA 90 bp CAGTGCGGAAGGGTGGCTCAAATAGAATTTCCTATGGGTGGGGCCAGCTGTGGCCCTTTCCTTCATCTCTaGGGCCCGGCCATTCTGAGA +
Preference number: 5 (lower is better)
Translates to: QCGRVAQIEFPMGGASCGPFLHL*GPAILR
Trigger: TCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGG...GCCACAGCTGGCCCCACCCATAGGAAATTCTATTTGAGCCACCCTTCCGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CAA 90 bp CATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTCCTGAGCTGTTCTTGTaGGTCTCCACCTTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: HGGGICRGAVARTWLCTAPELFL*VSTFLL
Trigger: CAGCAGAAAGGTGGAGACCAACAAGAACAGCTCAGG...AGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS GCA 90 bp AGGAAGATGTTGGGGGCTATGGATGGTCTGTTCCATGTCTGGTTCTaGCCCTGGTGCCATTTGACACTGGCCATGAGTAGGATGTTGGGG +
Preference number: 5 (lower is better)
Translates to: RKMLGAMDGLFHVWF*PWCHLTLAMSRMLG
Trigger: CCCCAACATCCTACTCATGGCCAGTGTCAAATGGCACCAGGGGCAGAACCAGACATGGAACAGACCATCCATAGCCCCCAACATCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315184.9
ENST00000469348.5
ENST00000471558.5
ENST00000483459.1
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5
ENST00000621392.4
CDS-3UTR CAA 90 bp CCTTTCACTCCTTTCCTTCATCTCTTGGGCCCGGCCATTCTGAGAGCACATCTTGGGCCTGCTGCACATTaGTCCTGGGATCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: PFTPFLHLLGPAILRAHLGPAAH*SWDLCL
Trigger: GAGACAGAGATCCCAGGACAAATGTGCAGCAGGCCC...AAGATGTGCTCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGGAGTGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR CAA 90 bp TATGCCGAGGTGCAGTGGCGAGGACGTGGTTATGTACAGCTGGAAAGGCTCTGCTTCCCTGAGCTGTTCTaGTTGGTCTCCACCTTTCTG +
Preference number: 5 (lower is better)
Translates to: YAEVQWRGRGYVQLERLCFPELF*LVSTFL
Trigger: CAGAAAGGTGGAGACCAACAAGAACAGCTCAGGGAA...GCAGAGCCTTTCCAGCTGTACATAACCACGTCCTCGCCACTGCACCTCGGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp CTGCAAAGTGGTGTTGACGAGGCTTGCATAGATTCTCCCCAGTGCGGAAGGGTGTCTCAACATGTGGCTTaGAGCTCTGGGTCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: LQSGVDEACIDSPQCGRVSQHVA*SSGSSG
Trigger: ACCTGAGGACCCAGAGCTCAAAGCCACATGTTGAGA...CACCCTTCCGCACTGGGGAGAATCTATGCAAGCCTCGTCAACACCACTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484425.6
ENST00000485070.5
CDS-3UTR CAA 90 bp CTGGCAGTGGCATGGAGGTGGCATATGCCGAGGTGCAGTGGCGAGGACGTGGTTACCACATCCTTTGGTTaGCATTTCCCTGGAAATAAC +
Preference number: 5 (lower is better)
Translates to: LAVAWRWHMPRCSGEDVVTTSFG*HFPGNN
Trigger: GTTATTTCCAGGGAAATGCAAACCAAAGGATGTGGT...AACCACGTCCTCGCCACTGCACCTCGGCATATGCCACCTCCATGCCACTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS CCA 90 bp CTCTTCAGGAAGATGTTGGGGGCTATGGATGGTCTGTTCCATGTCTaGTTCTGCCCCTGGTGCCATTTGACACTGGCCATGAGTAGGATG +
Preference number: 5 (lower is better)
Translates to: LFRKMLGAMDGLFHV*FCPWCHLTLAMSRM
Trigger: CATCCTACTCATGGCCAGTGTCAAATGGCACCAGGGGCAGAACCAGACATGGAACAGACCATCCATAGCCCCCAACATCTTCCTGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000315184.9
ENST00000469348.5
ENST00000471558.5
ENST00000483459.1
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5
ENST00000621392.4
CDS CCA 90 bp GATGGTCAGGATGGAGCTCTTCAGGAAGATGTTGGGGGCTATGGATaGTCTGTTCCATGTCTGGTTCTGCCCCTGGTGCCATTTGACACT +
Preference number: 5 (lower is better)
Translates to: DGQDGALQEDVGGYG*SVPCLVLPLVPFDT
Trigger: AGTGTCAAATGGCACCAGGGGCAGAACCAGACATGGAACAGACCATCCATAGCCCCCAACATCTTCCTGAAGAGCTCCATCCTGACCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469348.5
CDS-3UTR CAA 90 bp CTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCACAACTGCAGGATGCGTaGATAGTGGTCACATACCTG +
Preference number: 5 (lower is better)
Translates to: LGPMSLRALRCYKRLPPPQLQDA*IVVTYL
Trigger: CAGGTATGTGACCACTATCAACGCATCCTGCAGTTG...TGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471558.5
CDS-3UTR CAA 90 bp TGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTGCAGTTTTCTCCTACTCGGGCTGCTGCAGTTCTaGGGTACCAGGCAGTGCGTG +
Preference number: 5 (lower is better)
Translates to: CCHREMTLFFLGCSFLLLGLLQF*GTRQCV
Trigger: CACGCACTGCCTGGTACCCAAGAACTGCAGCAGCCC...GAGTAGGAGAAAACTGCAACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS TCA 90 bp AGCCCAGACCATCTGGGTTGCAGGAGGGAATGTCAGAGGCTGGCTTaGTTTAAGTCATGTACCTCAACTGGTTCTGCTGGTGTAAGTCGG +
Preference number: 5 (lower is better)
Translates to: SPDHLGCRRECQRLA*FKSCTSTGSAGVSR
Trigger: CCGACTTACACCAGCAGAACCAGTTGAGGTACATGACTTAAATCAAGCCAGCCTCTGACATTCCCTCCTGCAACCCAGATGGTCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493738.5
CDS-3UTR CAA 90 bp TTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCGGGCTGCTGCAGTTCTaGGGTACCAGGCAGTGCGTG +
Preference number: 5 (lower is better)
Translates to: LSSLSRLPSLFRFLLPLLGLLQF*GTRQCV
Trigger: CACGCACTGCCTGGTACCCAAGAACTGCAGCAGCCC...GAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp CTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTGGGCTGCTGCAGTTCTaGGGTACCAGGCAGTGCGTG +
Preference number: 5 (lower is better)
Translates to: LRCYKRLPPPSCTGFQFIGLLQF*GTRQCV
Trigger: CACGCACTGCCTGGTACCCAAGAACTGCAGCAGCCC...AATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CAA 90 bp CGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGCCTGAGCTGTTCTTGTaGGTCTCCACCTTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: RALRCYKRLPPPSCTGFQPELFL*VSTFLL
Trigger: CAGCAGAAAGGTGGAGACCAACAAGAACAGCTCAGG...CTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CAA 90 bp TCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCTTTCCTTCATCTCTaGGGCCCGGCCATTCTGAGA +
Preference number: 5 (lower is better)
Translates to: SQGCVPSLVLLISSTKSLPFLHL*GPAILR
Trigger: TCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGG...AAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp AGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCAGTCAGAGCAATGACTaGGGCCCATGTCTTTGCGAG +
Preference number: 5 (lower is better)
Translates to: SNDLGPCLCELFVAISACSQSND*GPCLCE
Trigger: CTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACT...GCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS TCA 90 bp AAATCTGAGACAGGGCTTCACTCTCCCCCTTGGTCATTAGCTGAATaGGACTCTCGCTGGGCTGGGAGGCTTGGAGTTTCTTCTGTACTA +
Preference number: 5 (lower is better)
Translates to: KSETGLHSPPWSLAE*DSRWAGRLGVSSVL
Trigger: TAGTACAGAAGAAACTCCAAGCCTCCCAGCCCAGCGAGAGTCTCATTCAGCTAATGACCAAGGGGGAGAGTGAAGCCCTGTCTCAGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315184.9
ENST00000466842.1
ENST00000469348.5
ENST00000471558.5
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5
ENST00000621392.4
CDS-3UTR CAA 90 bp TCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCTGAGCTGTTCTTGTaGGTCTCCACCTTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SQGCVPSLVLLISSTKSLPELFL*VSTFLL
Trigger: CAGCAGAAAGGTGGAGACCAACAAGAACAGCTCAGG...AAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp CTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCTTCCCTGAGCTGTTCTaGTTGGTCTCCACCTTTCTG +
Preference number: 5 (lower is better)
Translates to: LRGVSLLLSSLSRLPSLFFPELF*LVSTFL
Trigger: CAGAAAGGTGGAGACCAACAAGAACAGCTCAGGGAA...GAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp GTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTACCTTTCCTTCATCTCTaGGGCCCGGCCATTCTGAGA +
Preference number: 5 (lower is better)
Translates to: VSLLLSSLSRLPSLFRFLPFLHL*GPAILR
Trigger: TCTCAGAATGGCCGGGCCCAAGAGATGAAGGAAAGG...TAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp TCTCAGGGGTGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTTCTCAACATGTGGCTTaGAGCTCTGGGTCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: SQGCVPSLVLLISSTKSLSQHVA*SSGSSG
Trigger: ACCTGAGGACCCAGAGCTCAAAGCCACATGTTGAGA...AAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484425.6
ENST00000485070.5
CDS GCA 90 bp GACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTaGCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTACCAGTGCTC +
Preference number: 5 (lower is better)
Translates to: DLGPCLCELFVAISA*LLQAVLVFSLLPVL
Trigger: GAGCACTGGTAATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469348.5
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CAA 90 bp CAGAGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAAGCGCTCAATTCCTGCCCCTTTaGACCTGGATGAAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: QSNDLGPCLCELFVAISAQFLPL*TWMKLL
Trigger: AAGCAACTTCATCCAGGTCAAAAGGGGCAGGAATTG...AGCGCTTATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471558.5
CDS-3UTR CAA 90 bp GTACAGCTGGAAAGGCTCTGCTGTCACCGTGAGATGACTCTATTCTTCCTTGGTTTCCCTGAGCTGTTCTaGTTGGTCTCCACCTTTCTG +
Preference number: 5 (lower is better)
Translates to: VQLERLCCHREMTLFFLGFPELF*LVSTFL
Trigger: CAGAAAGGTGGAGACCAACAAGAACAGCTCAGGGAA...ACCAAGGAAGAATAGAGTCATCTCACGGTGACAGCAGAGCCTTTCCAGCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp TCTAAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGCGTTGCTATAAGCGCTaGCCTCCTCCAAGCTGTACT +
Preference number: 5 (lower is better)
Translates to: SKCLVHMSSLDPDIWMALRCYKR*PPPSCT
Trigger: AGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACG...CAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTTAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CAA 90 bp GTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTACTTGGGCCCATGTCTTaGCGAGCTCTTCGTTGCTAT +
Preference number: 5 (lower is better)
Translates to: VSLLLSSLSRLPSLFRFLLGPMS*RALRCY
Trigger: ATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAG...TAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CAA 90 bp TGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTAGTCAGAGCAATGACTaGGGCCCATGTCTTTGCGAG +
Preference number: 5 (lower is better)
Translates to: CVPSLVLLISSTKSLPFPSQSND*GPCLCE
Trigger: CTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACT...AGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CAA 90 bp AAGTGCTTGGTGCATATGAGCTCATTGGATCCTGACATCTGGATGGCGTTGGCACAATTCCTGCCCCTTTaGACCTGTTATAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KCLVHMSSLDPDIWMALAQFLPL*TCYSSW
Trigger: CCAGGAGCTATAACAGGTCAAAAGGGGCAGGAATTG...TGCCAACGCCATCCAGATGTCAGGATCCAATGAGCTCATATGCACCAAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CAA 90 bp TGTGTCCCTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTCAACTGCAGGATGCGTaGATAGTGGTCACATACCTG +
Preference number: 5 (lower is better)
Translates to: CVPSLVLLISSTKSLPFPQLQDA*IVVTYL
Trigger: CAGGTATGTGACCACTATCAACGCATCCTGCAGTTG...AGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAGGGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR CAA 90 bp TCTTTGCGAGCTCTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTGACATCTGGATGGCGTaGGCACTATTTTCATTTCCA +
Preference number: 5 (lower is better)
Translates to: SLRALRCYKRLPPPSCTGDIWMA*ALFSFP
Trigger: TGGAAATGAAAATAGTGCCAACGCCATCCAGATGTC...ACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAGAGCTCGCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS GCA 90 bp GCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTACCAGTaGTCAGAAAGAAAGGGAATTTGTTCTGCCTCTGAACTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: ALASSKLYWFSVYYQ*SERKGICSASELLV
Trigger: GACCAGCAGTTCAGAGGCAGAACAAATTCCCTTTCTTTCTGAGCACTGGTAATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469348.5
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CAA 90 bp TTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCCGTTGCTATAAGCGCTaGCCTCCTCCAAGCTGTACT +
Preference number: 5 (lower is better)
Translates to: LSSLSRLPSLFRFLLPLLRCYKR*PPPSCT
Trigger: AGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACG...GAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS-3UTR CAA 90 bp CTTCGTTGCTATAAGCGCTTGCCTCCTCCAAGCTGTACTGGTTTTCAGTTTATTCTTGGGCCCATGTCTTaGCGAGCTCTTCGTTGCTAT +
Preference number: 5 (lower is better)
Translates to: LRCYKRLPPPSCTGFQFILGPMS*RALRCY
Trigger: ATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAG...AATAAACTGAAAACCAGTACAGCTTGGAGGAGGCAAGCGCTTATAGCAACGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS-3UTR CAA 90 bp TGCAGTCAGAGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAGACATCTGGATGGCGTaGGCACTATTTTCATTTCCA +
Preference number: 5 (lower is better)
Translates to: CSQSNDLGPCLCELFVAIDIWMA*ALFSFP
Trigger: TGGAAATGAAAATAGTGCCAACGCCATCCAGATGTC...TATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471558.5
ENST00000484425.6
CDS CCA 90 bp ATTAACCAAGCTATTTGGTTTCTGGATCTCACAGCCCAGACCATCTaGGTTGCAGGAGGGAATGTCAGAGGCTGGCTTGATTTAAGTCAT +
Preference number: 5 (lower is better)
Translates to: INQAIWFLDLTAQTI*VAGGNVRGWLDLSH
Trigger: ATGACTTAAATCAAGCCAGCCTCTGACATTCCCTCCTGCAACCCAGATGGTCTGGGCTGTGAGATCCAGAAACCAAATAGCTTGGTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493738.5
CDS-3UTR CAA 90 bp TCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACTTCTCTTTCCTGAGCTGTTCTTGTaGGTCTCCACCTTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SSLSRLPSLFRFLLPLLFPELFL*VSTFLL
Trigger: CAGCAGAAAGGTGGAGACCAACAAGAACAGCTCAGG...AAAGAGAAGTGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp TGCAGTCAGAGCAATGACTTGGGCCCATGTCTTTGCGAGCTCTTCGTTGCTATAACCACATCCTTTGGTTaGCATTTCCCTGGAAATAAC +
Preference number: 5 (lower is better)
Translates to: CSQSNDLGPCLCELFVAITTSFG*HFPGNN
Trigger: GTTATTTCCAGGGAAATGCAAACCAAAGGATGTGGT...TATAGCAACGAAGAGCTCGCAAAGACATGGGCCCAAGTCATTGCTCTGACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484425.6
CDS TCA 90 bp TCTCAGGATGGTCAGGATGGAGCTTTAGGTAATAAATCTTCTCAGTaGCTGTCCTCAACTGCAGGATGCGTTGATAGTGGTCACATACCT +
Preference number: 5 (lower is better)
Translates to: SQDGQDGALGNKSSQ*LSSTAGCVDSGHIP
Trigger: AGGTATGTGACCACTATCAACGCATCCTGCAGTTGAGGACAGTCACTGAGAAGATTTATTACCTAAAGCTCCATCCTGACCATCCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000466842.1
ENST00000471558.5
ENST00000493738.5
CDS CCA 90 bp TGGTCATTCAGATCACACCCCTGCTCCAGCACCTGTTATAGCTCCTaGCTCAGTAAACCAACTTCCAACCTCACTTTTCTCATTATCTTT +
Preference number: 5 (lower is better)
Translates to: WSFRSHPCSSTCYSS*LSKPTSNLTFLIIF
Trigger: AAAGATAATGAGAAAAGTGAGGTTGGAAGTTGGTTTACTGAGCCAGGAGCTATAACAGGTGCTGGAGCAGGGGTGTGATCTGAATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485070.5
ENST00000621392.4
CDS-3UTR CAA 90 bp CTTCTCTTGTCCTCCTTATCTCGTCTACCAAGTCTCTTCCGTTTCCTATTACCACAATTCCTGCCCCTTTaGACCTGGATGAAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: LLLSSLSRLPSLFRFLLPQFLPL*TWMKLL
Trigger: AAGCAACTTCATCCAGGTCAAAAGGGGCAGGAATTG...TGGTAATAGGAAACGGAAGAGACTTGGTAGACGAGATAAGGAGGACAAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS-3UTR CAA 90 bp AGTTTTCTCCTACTCTCCATCCCGATAATCCCTCAGCAGCTGAATGCTGCAAAGACCACATCCTTTGGTTaGCATTTCCCTGGAAATAAC +
Preference number: 5 (lower is better)
Translates to: SFLLLSIPIIPQQLNAAKTTSFG*HFPGNN
Trigger: GTTATTTCCAGGGAAATGCAAACCAAAGGATGTGGT...CTTTGCAGCATTCAGCTGCTGAGGGATTATCGGGATGGAGAGTAGGAGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS TCA 72 bp ACAGGGCTTCACTCTCCCCCTTGGTCATTAGCTGAATaGGACTCTCGCTGGGCTGGGAGGCTTGGAGTTTCT +
Preference number: 6 (lower is better)
Translates to: TGLHSPPWSLAE*DSRWAGRLGVS
Trigger: AGAAACTCCAAGCCTCCCAGCCCAGCGAGAGTCTCATTCAGCTAATGACCAAGGGGGAGAGTGAAGCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315184.9
ENST00000466842.1
ENST00000469348.5
ENST00000471558.5
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5
ENST00000621392.4
CDS GCA 72 bp TTGGGGGCTATGGATGGTCTGTTCCATGTCTGGTTCTaGCCCTGGTGCCATTTGACACTGGCCATGAGTAGG +
Preference number: 6 (lower is better)
Translates to: LGAMDGLFHVWF*PWCHLTLAMSR
Trigger: CCTACTCATGGCCAGTGTCAAATGGCACCAGGGGCAGAACCAGACATGGAACAGACCATCCATAGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315184.9
ENST00000469348.5
ENST00000471558.5
ENST00000483459.1
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5
ENST00000621392.4
CDS CAA 72 bp GGATACAGTTATCTCTGCCCTTCTCAACATGTGGCTTaGAGCTCTGGGTCCTCAGGTGGCTGCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GYSYLCPSQHVA*SSGSSGGCSSS
Trigger: GGAGCTGGAGCAGCCACCTGAGGACCCAGAGCTCAAAGCCACATGTTGAGAAGGGCAGAGATAACTGTATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469348.5
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5
CDS TCA 72 bp ACCACGGAGTCAAGAAACAGGTTGAATTCTGGAGAATaGACCACCCGGCAGAGCAGTCCCTCCTCCACACCT +
Preference number: 6 (lower is better)
Translates to: TTESRNRLNSGE*TTRQSSPSSTP
Trigger: AGGTGTGGAGGAGGGACTGCTCTGCCGGGTGGTTCATTCTCCAGAATTCAACCTGTTTCTTGACTCCGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315184.9
ENST00000471558.5
ENST00000483459.1
CDS CCA 72 bp AAGATGTTGGGGGCTATGGATGGTCTGTTCCATGTCTaGTTCTGCCCCTGGTGCCATTTGACACTGGCCATG +
Preference number: 6 (lower is better)
Translates to: KMLGAMDGLFHV*FCPWCHLTLAM
Trigger: CATGGCCAGTGTCAAATGGCACCAGGGGCAGAACCAGACATGGAACAGACCATCCATAGCCCCCAACATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000315184.9
ENST00000469348.5
ENST00000471558.5
ENST00000483459.1
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5
ENST00000621392.4
CDS CAA 72 bp ACTAACTTCGAATCTCCTGAGGGGCTGCTGCAGTTCTaGGGTACCAGGCAGTGCGTGACAAGAATCCTAGGG +
Preference number: 6 (lower is better)
Translates to: TNFESPEGLLQF*GTRQCVTRILG
Trigger: CCCTAGGATTCTTGTCACGCACTGCCTGGTACCCAAGAACTGCAGCAGCCCCTCAGGAGATTCGAAGTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315184.9
ENST00000466842.1
ENST00000469348.5
ENST00000471558.5
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5
ENST00000621392.4
CDS CCA 72 bp GCTATGGATGGTCTGTTCCATGTCTGGTTCTGCCCCTaGTGCCATTTGACACTGGCCATGAGTAGGATGTTG +
Preference number: 6 (lower is better)
Translates to: AMDGLFHVWFCP*CHLTLAMSRML
Trigger: CAACATCCTACTCATGGCCAGTGTCAAATGGCACCAGGGGCAGAACCAGACATGGAACAGACCATCCATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315184.9
ENST00000469348.5
ENST00000471558.5
ENST00000483459.1
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5
ENST00000621392.4
CDS CCA 72 bp GCTATTTGGTTTCTGGATCTCACAGCCCAGACCATCTaGGTTGCAGGAGGGAATGTCAGAGGCTGGCTTGAT +
Preference number: 6 (lower is better)
Translates to: AIWFLDLTAQTI*VAGGNVRGWLD
Trigger: ATCAAGCCAGCCTCTGACATTCCCTCCTGCAACCCAGATGGTCTGGGCTGTGAGATCCAGAAACCAAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493738.5
CDS TCA 72 bp CTCAACTGGTTCTGCTGGTGTAAGTCGGCAAAAATCTaGGACAGGGCTTCACTCTCCCCCTTGGTCATTAGC +
Preference number: 6 (lower is better)
Translates to: LNWFCWCKSAKI*DRASLSPLVIS
Trigger: GCTAATGACCAAGGGGGAGAGTGAAGCCCTGTCTCAGATTTTTGCCGACTTACACCAGCAGAACCAGTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000315184.9
ENST00000466842.1
ENST00000469348.5
ENST00000471558.5
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5
ENST00000621392.4
CDS GCA 72 bp CAAAGGTCAGCAGTCCAGAGTGGATACAGTTATCTCTaGCCTTCTCAACATGTGGCTTTGAGCTCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: QRSAVQSGYSYL*PSQHVALSSGS
Trigger: GGACCCAGAGCTCAAAGCCACATGTTGAGAAGGGCAGAGATAACTGTATCCACTCTGGACTGCTGACCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469348.5
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5
CDS GCA 72 bp ATCAGTCCTTCCCTCTGGTCATTCAGATCACACCCCTaGTCCAGCACCTGTTATAGCTCCTGGCTCAGTAAA +
Preference number: 6 (lower is better)
Translates to: ISPSLWSFRSHP*SSTCYSSWLSK
Trigger: TTTACTGAGCCAGGAGCTATAACAGGTGCTGGAGCAGGGGTGTGATCTGAATGACCAGAGGGAAGGACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485070.5
ENST00000621392.4
CDS GCA 72 bp GCTCAGAAAGAAAGGGAATTTGTTCTGCCTCTGAACTaGTGGTCCAACTGGTTCCTCAACTGGTTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: AQKEREFVLPLN*WSNWFLNWFCW
Trigger: CCAGCAGAACCAGTTGAGGAACCAGTTGGACCAGCAGTTCAGAGGCAGAACAAATTCCCTTTCTTTCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469348.5
ENST00000471558.5
ENST00000484425.6
CDS CCA 72 bp AAAACCCTGCGCTCATTAACCAAGCTATTTGGTTTCTaGATCTCACAGCCCAGACCATCTGGGTTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: KTLRSLTKLFGF*ISQPRPSGLQE
Trigger: CTCCTGCAACCCAGATGGTCTGGGCTGTGAGATCCAGAAACCAAATAGCTTGGTTAATGAGCGCAGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493738.5
CDS TCA 72 bp CCAGTGCTCAGAAAGAAAGGGAATTTGTTCTGCCTCTaGACTGCTGGTCCAACTGGTTCCTCAACTGGTTCT +
Preference number: 6 (lower is better)
Translates to: PVLRKKGNLFCL*TAGPTGSSTGS
Trigger: AGAACCAGTTGAGGAACCAGTTGGACCAGCAGTTCAGAGGCAGAACAAATTCCCTTTCTTTCTGAGCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469348.5
ENST00000471558.5
ENST00000484425.6
CDS CCA 72 bp CAAACCTCAATGGGAGAATCCTCTTCAGGAAGATGTTaGGGGCTATGGATGGTCTGTTCCATGTCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: QTSMGESSSGRC*GLWMVCSMSGS
Trigger: AGAACCAGACATGGAACAGACCATCCATAGCCCCCAACATCTTCCTGAAGAGGATTCTCCCATTGAGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315184.9
ENST00000471558.5
ENST00000493738.5
CDS CCA 72 bp TTCTCAGTGACTGTCCTCAACTCTTCAGGAAGATGTTaGGGGCTATGGATGGTCTGTTCCATGTCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: FSVTVLNSSGRC*GLWMVCSMSGS
Trigger: AGAACCAGACATGGAACAGACCATCCATAGCCCCCAACATCTTCCTGAAGAGTTGAGGACAGTCACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000483459.1
ENST00000484425.6
ENST00000485070.5
ENST00000621392.4
CDS CAA 72 bp AATCTTCTCAGTGACTGTCCTCAACTGCAGGATGCGTaGATAGTGGTCACATACCTGGAGCTCCACAAACCT +
Preference number: 6 (lower is better)
Translates to: NLLSDCPQLQDA*IVVTYLELHKP
Trigger: AGGTTTGTGGAGCTCCAGGTATGTGACCACTATCAACGCATCCTGCAGTTGAGGACAGTCACTGAGAAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000466842.1
ENST00000471558.5
ENST00000493738.5
CDS CAA 72 bp TCTTCACGGGAAGAATCTTTCCCTGAGCTGTTCTTGTaGGTCTCCACCTTTCTGCTGCTCCTGAAACTCAAC +
Preference number: 6 (lower is better)
Translates to: SSREESFPELFL*VSTFLLLLKLN
Trigger: GTTGAGTTTCAGGAGCAGCAGAAAGGTGGAGACCAACAAGAACAGCTCAGGGAAAGATTCTTCCCGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315184.9
CDS TCA 72 bp GGTCAGGATGGAGCTTTAGGTAATAAATCTTCTCAGTaGCTGTCCTCAACTGCAGGATGCGTTGATAGTGGT +
Preference number: 6 (lower is better)
Translates to: GQDGALGNKSSQ*LSSTAGCVDSG
Trigger: ACCACTATCAACGCATCCTGCAGTTGAGGACAGTCACTGAGAAGATTTATTACCTAAAGCTCCATCCTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315184.9
ENST00000466842.1
ENST00000471558.5
ENST00000493738.5
CDS CAA 90 bp TGGTCACATTCTCTAAGGATTAGATCAGAGACCACATCCTTTGGTTaGCATTTCCCTGGAAATAACCTAGAAAGGGAACACACAGCACAA +
Preference number: 6 (lower is better)
Translates to: WSHSLRIRSETTSFG*HFPGNNLEREHTAQ
Trigger: TTGTGCTGTGTGTTCCCTTTCTAGGTTATTTCCAGGGAAATGCAAACCAAAGGATGTGGTCTCTGATCTAATCCTTAGAGAATGTGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621392.4
CDS CAA 90 bp TGGTCACATTCTCTAAGGATTAGATCAGAGACCACATCCTTTGGTTaGCATTTCCCTGGAAATAACATAATAGTTCAAAGGTCAGCAGTC +
Preference number: 6 (lower is better)
Translates to: WSHSLRIRSETTSFG*HFPGNNIIVQRSAV
Trigger: GACTGCTGACCTTTGAACTATTATGTTATTTCCAGGGAAATGCAAACCAAAGGATGTGGTCTCTGATCTAATCCTTAGAGAATGTGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469348.5
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5
CDS CAA 72 bp TCTCTAAGGATTAGATCAGAGACCACATCCTTTGGTTaGCATTTCCCTGGAAATAACATAATAGTTCAAAGG +
Preference number: 6 (lower is better)
Translates to: SLRIRSETTSFG*HFPGNNIIVQR
Trigger: CCTTTGAACTATTATGTTATTTCCAGGGAAATGCAAACCAAAGGATGTGGTCTCTGATCTAATCCTTAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469348.5
ENST00000484425.6
ENST00000485070.5
ENST00000493738.5