Pregenerated sensors for FAM240A (Homo sapiens)
Ensembl gene IDs: ENSG00000283473Ensembl transcript IDs: ENST00000444264.1, ENST00000640551.3
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCAAAGGATGGCTGGGGGTTCAGGTGTCCTTCACAATTAAGGTATaGAACTCCCGGTTGGCCACTCCCGGATTCCTTAGCTTGGGACTC | + |
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Preference number: 1 (lower is better) Translates to: SKGWLGVQVSFTIKV*NSRLATPGFLSLGL Trigger: GAGTCCCAAGCTAAGGAATCCGGGAGTGGCCAACCGGGAGTTTCATACCTTAATTGTGAAGGACACCTGAACCCCCAGCCATCCTTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR GCA 90 bp | AAATCCAGAATCTGTGTGGTAAACACTCTGTGGAATGGCCAGATATaGTTTGGCTGGGCTGACAGAGAGCCAACCAGTGTAAACATGCAG | + |
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Preference number: 1 (lower is better) Translates to: KSRICVVNTLWNGQI*FGWADREPTSVNMQ Trigger: CTGCATGTTTACACTGGTTGGCTCTCTGTCAGCCCAGCCAAAGCATATCTGGCCATTCCACAGAGTGTTTACCACACAGATTCTGGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 90 bp | GGTAAGTCCTCTCCCAGGTGGGGAAACAATAGTGTGAGAGCTGATTaGTATAGCAAAGGGACTCAGGAATTTGCACTGACTTCTAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: GKSSPRWGNNSVRAD*YSKGTQEFALTSSK Trigger: TTTGCTAGAAGTCAGTGCAAATTCCTGAGTCCCTTTGCTATACCAATCAGCTCTCACACTATTGTTTCCCCACCTGGGAGAGGACTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 90 bp | CCATCAAACACTGGGAAAGGATTTACAGGTAAGTCCTCTCCCAGGTaGGGAAACAATAGTGTGAGAGCTGATTGGTATAGCAAAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: PSNTGKGFTGKSSPR*GNNSVRADWYSKGT Trigger: AGTCCCTTTGCTATACCAATCAGCTCTCACACTATTGTTTCCCCACCTGGGAGAGGACTTACCTGTAAATCCTTTCCCAGTGTTTGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 90 bp | TTAAGGTATGAAACTCCCGGTTGGCCACTCCCGGATTCCTTAGCTTaGGACTCCGAACACACATTCTTCTTAGACCATAATGTCATTCTC | + |
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Preference number: 1 (lower is better) Translates to: LRYETPGWPLPDSLA*DSEHTFFLDHNVIL Trigger: GAGAATGACATTATGGTCTAAGAAGAATGTGTGTTCGGAGTCCCAAGCTAAGGAATCCGGGAGTGGCCAACCGGGAGTTTCATACCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 90 bp | ATCTGTGTGGTAAACACTCTGTGGAATGGCCAGATATGCTTTGGCTaGGCTGACAGAGAGCCAACCAGTGTAAACATGCAGAGATTAAAA | + |
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Preference number: 1 (lower is better) Translates to: ICVVNTLWNGQICFG*ADREPTSVNMQRLK Trigger: TTTTAATCTCTGCATGTTTACACTGGTTGGCTCTCTGTCAGCCCAGCCAAAGCATATCTGGCCATTCCACAGAGTGTTTACCACACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 90 bp | GCACTCTTGGAAGCATCAAACCCTGGTGCTTCTGAACTTGAGAGATaGCAAGGGAGTGACTATACCATTTCAAAATCCAGAATCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: ALLEASNPGASELER*QGSDYTISKSRICV Trigger: CACACAGATTCTGGATTTTGAAATGGTATAGTCACTCCCTTGCCATCTCTCAAGTTCAGAAGCACCAGGGTTTGATGCTTCCAAGAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR TCA 90 bp | TGTGGTAAACACTCTGTGGAATGGCCAGATATGCTTTGGCTGGGCTaGCAGAGAGCCAACCAGTGTAAACATGCAGAGATTAAAATAAAG | + |
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Preference number: 1 (lower is better) Translates to: CGKHSVEWPDMLWLG*QRANQCKHAEIKIK Trigger: CTTTATTTTAATCTCTGCATGTTTACACTGGTTGGCTCTCTGTCAGCCCAGCCAAAGCATATCTGGCCATTCCACAGAGTGTTTACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR GCA 90 bp | TGTATTTGCTTAACTTATTATCTTGTTATTGCTGTCAGGTGCGTCTaGCATACAGTGCCTCTGTGTATAGTATATAAGGCCTTGCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: CICLTYYLVIAVRCV*HTVPLCIVYKALQV Trigger: CACCTGCAAGGCCTTATATACTATACACAGAGGCACTGTATGGCAGACGCACCTGACAGCAATAACAAGATAATAAGTTAAGCAAATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR GCA 90 bp | TCTCAGTGTATTTGCTTAACTTATTATCTTGTTATTGCTGTCAGGTaGGTCTGCCATACAGTGCCTCTGTGTATAGTATATAAGGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: SQCICLTYYLVIAVR*VCHTVPLCIVYKAL Trigger: CAAGGCCTTATATACTATACACAGAGGCACTGTATGGCAGACGCACCTGACAGCAATAACAAGATAATAAGTTAAGCAAATACACTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR GCA 90 bp | TTGGCCACTCCCGGATTCCTTAGCTTGGGACTCCGAACACACATTCTTCTTAGATGGAATGGCCAGATATaGTTTGGCTGGGCTGACAGA | + |
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Preference number: 2 (lower is better) Translates to: LATPGFLSLGLRTHILLRWNGQI*FGWADR Trigger: TCTGTCAGCCCAGCCAAAGCATATCTGGCCATTCCA...TCTAAGAAGAATGTGTGTTCGGAGTCCCAAGCTAAGGAATCCGGGAGTGGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCTTCTCCCTTCCCTTGCAGATATGCTTTGGCTaGGCTGACAGAGAGCCAACC | + |
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Preference number: 2 (lower is better) Translates to: QPASTQDFISLHLFSLPLQICFG*ADREPT Trigger: GGTTGGCTCTCTGTCAGCCCAGCCAAAGCATATCTG...CAAGGGAAGGGAGAAGAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CAA 90 bp | AGGTGCGTCTGCCATACAGTGCCTCTGTGTATAGTATATAAGGCCTaGCAGGTGCTGCTTACAGCCAGCAAGTACCCAGGACTTTATATC | + |
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Preference number: 2 (lower is better) Translates to: RCVCHTVPLCIVYKA*QVLLTASKYPGLYI Trigger: GATATAAAGTCCTGGGTACTTGCTGGCTGTAAGCAGCACCTGCAAGGCCTTATATACTATACACAGAGGCACTGTATGGCAGACGCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCAGGCCCAGTTACAGTTTGCACTCTTGGAAGCATCAAACCCTGGTGCTTATCTTTAGAGACATTTaGGATAATAACCTGGCGCCC | + |
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Preference number: 2 (lower is better) Translates to: CLRPSYSLHSWKHQTLVLIFRDI*DNNLAP Trigger: GGGCGCCAGGTTATTATCCCAAATGTCTCTAAAGAT...AAGCACCAGGGTTTGATGCTTCCAAGAGTGCAAACTGTAACTGGGCCTGAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCTTCTCCCTTCCCTTGTTTGACCATGAAGGTTaGGGATTCCTCTTGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QPASTQDFISLHLFSLPLFDHEG*GFLLVC Trigger: ACACACCAAGAGGAATCCTCAACCTTCATGGTCAAA...CAAGGGAAGGGAGAAGAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCTTCTCCCTTCCCTTGAGTGTGAGAGCTGATTaGTATAGCAAAGGGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: QPASTQDFISLHLFSLPLSVRAD*YSKGTQ Trigger: CTGAGTCCCTTTGCTATACCAATCAGCTCTCACACT...CAAGGGAAGGGAGAAGAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CCA 90 bp | TGCAGGTGCTGCTTACAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCTCTGAACTTGAGAGATaGCAAGGGAGTGACTATACC | + |
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Preference number: 2 (lower is better) Translates to: CRCCLQPASTQDFISLHLSELER*QGSDYT Trigger: GGTATAGTCACTCCCTTGCCATCTCTCAAGTTCAGA...GAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTGTAAGCAGCACCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR GCA 90 bp | TTGGCCACTCCCGGATTCCTTAGCTTGGGACTCCGAACACACATTCTTCTTAGATATAGAAGCAAGGAATaGTGCATGGAGCTTCGATAT | + |
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Preference number: 2 (lower is better) Translates to: LATPGFLSLGLRTHILLRYRSKE*CMELRY Trigger: ATATCGAAGCTCCATGCAGCATTCCTTGCTTCTATA...TCTAAGAAGAATGTGTGTTCGGAGTCCCAAGCTAAGGAATCCGGGAGTGGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CCA 90 bp | CTTACAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCTTCTCCCTTCCCACAGAGGACTGACTTaGCCAATAACTGCCATCAAA | + |
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Preference number: 2 (lower is better) Translates to: LTASKYPGLYIIASLLPSHRGLT*PITAIK Trigger: TTTGATGGCAGTTATTGGCCAAGTCAGTCCTCTGTG...GGAAGGGAGAAGAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CCA 90 bp | CTTACAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCTTCTCCCTTCCTACAGTTTGCACTCTTaGAAGCATCAAACCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LTASKYPGLYIIASLLPSYSLHS*KHQTLV Trigger: CACCAGGGTTTGATGCTTCCAAGAGTGCAAACTGTA...GGAAGGGAGAAGAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CAA 90 bp | TACAGTTTGCACTCTTGGAAGCATCAAACCCTGGTGCTTCTGAACTaGAGAGATGGCAAGGGAGTGACTATACCATTTCAAAATCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: YSLHSWKHQTLVLLN*RDGKGVTIPFQNPE Trigger: TTCTGGATTTTGAAATGGTATAGTCACTCCCTTGCCATCTCTCAAGTTCAGAAGCACCAGGGTTTGATGCTTCCAAGAGTGCAAACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CAA 90 bp | GCAAGTACCCAGGACTTTATATCATTGCATCTCTTCTCCCTTCCCTaGGTTAAAATAATTGCCTCAGGCCCAGTTACAGTTTGCACTCTT | + |
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Preference number: 2 (lower is better) Translates to: ASTQDFISLHLFSLP*VKIIASGPVTVCTL Trigger: AAGAGTGCAAACTGTAACTGGGCCTGAGGCAATTATTTTAACCAAGGGAAGGGAGAAGAGATGCAATGATATAAAGTCCTGGGTACTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR TCA 90 bp | ATTTCAAAATCCAGAATCTGTGTGGTAAACACTCTGTGGAATGGCCAGATATGCTTTGACCATGAAGGTTaGGGATTCCTCTTGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ISKSRICVVNTLWNGQICFDHEG*GFLLVC Trigger: ACACACCAAGAGGAATCCTCAACCTTCATGGTCAAA...GCATATCTGGCCATTCCACAGAGTGTTTACCACACAGATTCTGGATTTTGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGCATGCAGTTTATATAGCATTTTCACTTAGCACCCTCCACCTAGCAACCGGCCCAGTTACAGTTTaGACTCTTGGAAGCATCAAA | + |
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Preference number: 2 (lower is better) Translates to: KKHAVYIAFSLSTLHLATGPVTV*TLGSIK Trigger: TTTGATGCTTCCAAGAGTGCAAACTGTAACTGGGCC...GGTTGCTAGGTGGAGGGTGCTAAGTGAAAATGCTATATAAACTGCATGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGCATGCAGTTTATATAGCATTTTCACTTAGCACCCTCCACCTAGCAACCGAGATGGCAAGGGAGTaGCTATACCATTTCAAAATC | + |
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Preference number: 2 (lower is better) Translates to: KKHAVYIAFSLSTLHLATEMARE*LYHFKI Trigger: GATTTTGAAATGGTATAGTCACTCCCTTGCCATCTC...GGTTGCTAGGTGGAGGGTGCTAAGTGAAAATGCTATATAAACTGCATGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAAACAAGAATTCCATAAAGCTGTGTTTCCTAGGTGAAATGGTGGGGCAACACAGAGGACTGACTTaGCCAATAACTGCCATCAAA | + |
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Preference number: 2 (lower is better) Translates to: KENKNSIKLCFLGEMVGQHRGLT*PITAIK Trigger: TTTGATGGCAGTTATTGGCCAAGTCAGTCCTCTGTG...TTGCCCCACCATTTCACCTAGGAAACACAGCTTTATGGAATTCTTGTTTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAATGCTGCATGGAGCTTCGATATTAAATAAGCTATCTTTAGAGACATTTAAGTCCTCTCCCAGGTaGGGAAACAATAGTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: QGMLHGASILNKLSLETFKSSPR*GNNSVR Trigger: TCTCACACTATTGTTTCCCCACCTGGGAGAGGACTT...AAATGTCTCTAAAGATAGCTTATTTAATATCGAAGCTCCATGCAGCATTCCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTTCGATATTAAATAAGCTATCTTTAGAGACATTTGGGATAATAACCTGGAGTGTGAGAGCTGATTaGTATAGCAAAGGGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: GASILNKLSLETFGIITWSVRAD*YSKGTQ Trigger: CTGAGTCCCTTTGCTATACCAATCAGCTCTCACACT...CCAGGTTATTATCCCAAATGTCTCTAAAGATAGCTTATTTAATATCGAAGCTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR GCA 72 bp | ATCTGTGTGGTAAACACTCTGTGGAATGGCCAGATATaGTTTGGCTGGGCTGACAGAGAGCCAACCAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: ICVVNTLWNGQI*FGWADREPTSV Trigger: TACACTGGTTGGCTCTCTGTCAGCCCAGCCAAAGCATATCTGGCCATTCCACAGAGTGTTTACCACACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 72 bp | GAAACTCCCGGTTGGCCACTCCCGGATTCCTTAGCTTaGGACTCCGAACACACATTCTTCTTAGACCATAAT | + |
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Preference number: 3 (lower is better) Translates to: ETPGWPLPDSLA*DSEHTFFLDHN Trigger: ATTATGGTCTAAGAAGAATGTGTGTTCGGAGTCCCAAGCTAAGGAATCCGGGAGTGGCCAACCGGGAGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR TCA 72 bp | CAGGTAAGTCCTCTCCCAGGTGGGGAAACAATAGTGTaGGAGCTGATTGGTATAGCAAAGGGACTCAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: QVSPLPGGETIV*ELIGIAKGLRN Trigger: ATTCCTGAGTCCCTTTGCTATACCAATCAGCTCTCACACTATTGTTTCCCCACCTGGGAGAGGACTTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 72 bp | GATAATAACCTGGCGCCCATGCACAGAGGACTGACTTaGCCAATAACTGCCATCAAACACTGGGAAAGGATT | + |
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Preference number: 3 (lower is better) Translates to: DNNLAPMHRGLT*PITAIKHWERI Trigger: AATCCTTTCCCAGTGTTTGATGGCAGTTATTGGCCAAGTCAGTCCTCTGTGCATGGGCGCCAGGTTATTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 72 bp | GGCTTTGATCCCCTGTACAACCTATGTTCCAAAGGATaGCTGGGGGTTCAGGTGTCCTTCACAATTAAGGTA | + |
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Preference number: 3 (lower is better) Translates to: GFDPLYNLCSKG*LGVQVSFTIKV Trigger: TACCTTAATTGTGAAGGACACCTGAACCCCCAGCCATCCTTTGGAACATAGGTTGTACAGGGGATCAAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CAA 90 bp | CTTACAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCTTCTCCCTTCCGCACAGAGGACTGACTaGGCCAATAACTGCCATCAA | + |
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Preference number: 3 (lower is better) Translates to: LTASKYPGLYIIASLLPSAQRTD*ANNCHQ Trigger: TTGATGGCAGTTATTGGCCAAGTCAGTCCTCTGTGC...GGAAGGGAGAAGAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CAA 90 bp | CCACTCCCGGATTCCTTAGCTTGGGACTCCGAACACACATTCTTCTTAGACCATAGTGACCTCAGTGTTTaGCATCTTCTTGTGTCAATG | + |
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Preference number: 3 (lower is better) Translates to: PLPDSLAWDSEHTFFLDHSDLSV*HLLVSM Trigger: CATTGACACAAGAAGATGCAAAACACTGAGGTCACT...ATGGTCTAAGAAGAATGTGTGTTCGGAGTCCCAAGCTAAGGAATCCGGGAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 72 bp | TCTCCCAGGTGGGGAAACAATAGTGTGAGAGCTGATTaGTATAGCAAAGGGACTCAGGAATTTGCACTGACT | + |
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Preference number: 3 (lower is better) Translates to: SPRWGNNSVRAD*YSKGTQEFALT Trigger: AGTCAGTGCAAATTCCTGAGTCCCTTTGCTATACCAATCAGCTCTCACACTATTGTTTCCCCACCTGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 72 bp | ACTGGGAAAGGATTTACAGGTAAGTCCTCTCCCAGGTaGGGAAACAATAGTGTGAGAGCTGATTGGTATAGC | + |
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Preference number: 3 (lower is better) Translates to: TGKGFTGKSSPR*GNNSVRADWYS Trigger: GCTATACCAATCAGCTCTCACACTATTGTTTCCCCACCTGGGAGAGGACTTACCTGTAAATCCTTTCCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 72 bp | AATAATTGCCTCAGGCCCAGTTACAGTTTGCACTCTTaGAAGCATCAAACCCTGGTGCTTCTGAACTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: NNCLRPSYSLHS*KHQTLVLLNLR Trigger: TCTCAAGTTCAGAAGCACCAGGGTTTGATGCTTCCAAGAGTGCAAACTGTAACTGGGCCTGAGGCAATTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 72 bp | TTGATCCCCTGTACAACCTATGTTCCAAAGGATGGCTaGGGGTTCAGGTGTCCTTCACAATTAAGGTATGAA | + |
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Preference number: 3 (lower is better) Translates to: LIPCTTYVPKDG*GFRCPSQLRYE Trigger: TTCATACCTTAATTGTGAAGGACACCTGAACCCCCAGCCATCCTTTGGAACATAGGTTGTACAGGGGATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR CCA 72 bp | GAAGCATCAAACCCTGGTGCTTCTGAACTTGAGAGATaGCAAGGGAGTGACTATACCATTTCAAAATCCAGA | + |
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Preference number: 3 (lower is better) Translates to: EASNPGASELER*QGSDYTISKSR Trigger: TCTGGATTTTGAAATGGTATAGTCACTCCCTTGCCATCTCTCAAGTTCAGAAGCACCAGGGTTTGATGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CAA 90 bp | TACAGTTTGCACTCTTGGAAGCATCAAACCCTGGTGCTTCTGAACTTGAGAGATAGTGACCTCAGTGTTTaGCATCTTCTTGTGTCAATG | + |
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Preference number: 3 (lower is better) Translates to: YSLHSWKHQTLVLLNLRDSDLSV*HLLVSM Trigger: CATTGACACAAGAAGATGCAAAACACTGAGGTCACT...ATCTCTCAAGTTCAGAAGCACCAGGGTTTGATGCTTCCAAGAGTGCAAACTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CAA 90 bp | AAAGAAAACAAGAATTCCATAAAGCTGTGTTTCCTAGGTGAAATGGTGGGGCAAGCACAGAGGACTGACTaGGCCAATAACTGCCATCAA | + |
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Preference number: 3 (lower is better) Translates to: KENKNSIKLCFLGEMVGQAQRTD*ANNCHQ Trigger: TTGATGGCAGTTATTGGCCAAGTCAGTCCTCTGTGC...TTGCCCCACCATTTCACCTAGGAAACACAGCTTTATGGAATTCTTGTTTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CAA 90 bp | AAAAAGCATGCAGTTTATATAGCATTTTCACTTAGCACCCTCCACCTAGCAACCAGGCCCAGTTACAGTTaGCACTCTTGGAAGCATCAA | + |
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Preference number: 3 (lower is better) Translates to: KKHAVYIAFSLSTLHLATRPSYS*HSWKHQ Trigger: TTGATGCTTCCAAGAGTGCAAACTGTAACTGGGCCT...GGTTGCTAGGTGGAGGGTGCTAAGTGAAAATGCTATATAAACTGCATGCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR-3UTR CAA 90 bp | AAAAAGCATGCAGTTTATATAGCATTTTCACTTAGCACCCTCCACCTAGCAACCTTACAGTTTGCACTCTaGGAAGCATCAAACCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: KKHAVYIAFSLSTLHLATLQFAL*EASNPG Trigger: ACCAGGGTTTGATGCTTCCAAGAGTGCAAACTGTAA...GGTTGCTAGGTGGAGGGTGCTAAGTGAAAATGCTATATAAACTGCATGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR GCA 72 bp | TTAACTTATTATCTTGTTATTGCTGTCAGGTGCGTCTaGCATACAGTGCCTCTGTGTATAGTATATAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: LTYYLVIAVRCV*HTVPLCIVYKA Trigger: GGCCTTATATACTATACACAGAGGCACTGTATGGCAGACGCACCTGACAGCAATAACAAGATAATAAGTTAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
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| 3UTR GCA 72 bp | ATTTGCTTAACTTATTATCTTGTTATTGCTGTCAGGTaGGTCTGCCATACAGTGCCTCTGTGTATAGTATAT | + |
|
Preference number: 3 (lower is better) Translates to: ICLTYYLVIAVR*VCHTVPLCIVY Trigger: ATATACTATACACAGAGGCACTGTATGGCAGACGCACCTGACAGCAATAACAAGATAATAAGTTAAGCAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
||
| CDS-3UTR GCA 90 bp | TGCCTCAGGCCCAGTTACAGTTTGCACTCTTGGAAGCATCAAACCCTGGTGCTTGTGAGGCATCTGTGCTaGCCCAGGAGCCAATTCACG | + |
|
Preference number: 4 (lower is better) Translates to: CLRPSYSLHSWKHQTLVLVRHLC*PRSQFT Trigger: CGTGAATTGGCTCCTGGGGCAGCACAGATGCCTCAC...AAGCACCAGGGTTTGATGCTTCCAAGAGTGCAAACTGTAACTGGGCCTGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR GCA 90 bp | TGCAGGTGCTGCTTACAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCTCTGAGCTTTCTCAGTaGGCTTCTTCCCAGACGACG | + |
|
Preference number: 4 (lower is better) Translates to: CRCCLQPASTQDFISLHLSELSQ*ASSQTT Trigger: CGTCGTCTGGGAAGAAGCGCACTGAGAAAGCTCAGA...GAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTGTAAGCAGCACCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGTAAGTCCTCTCCCAGGTGGGGAAACAATAGTGTGAGAGCTGATTGGTATGTTCCAAAGGATGGCTaGGGGTTCAGGTGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGKSSPRWGNNSVRADWYVPKDG*GFRCPS Trigger: TGAAGGACACCTGAACCCCCAGCCATCCTTTGGAAC...ATACCAATCAGCTCTCACACTATTGTTTCCCCACCTGGGAGAGGACTTACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| 3UTR CAA 72 bp | TGCCATACAGTGCCTCTGTGTATAGTATATAAGGCCTaGCAGGTGCTGCTTACAGCCAGCAAGTACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CHTVPLCIVYKA*QVLLTASKYPG Trigger: TCCTGGGTACTTGCTGGCTGTAAGCAGCACCTGCAAGGCCTTATATACTATACACAGAGGCACTGTATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
||
| CDS-3UTR GCA 90 bp | TGCAGGTGCTGCTTACAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCATAAGGCCTTGCAGGTaGTGCTTACAGCCAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CRCCLQPASTQDFISLHLIRPCR*CLQPAS Trigger: ACTTGCTGGCTGTAAGCAGCACCTGCAAGGCCTTAT...GAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTGTAAGCAGCACCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGTAAGTCCTCTCCCAGGTGGGGAAACAATAGTGTGAGAGCTGATTGGTATCTTTTCAGTGTCCTCTaGATTGTTCCGCAGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGKSSPRWGNNSVRADWYLFSVL*IVPQPQ Trigger: CTGAGGCTGCGGAACAATCCAGAGGACACTGAAAAG...ATACCAATCAGCTCTCACACTATTGTTTCCCCACCTGGGAGAGGACTTACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR TCA 90 bp | TTGGCCACTCCCGGATTCCTTAGCTTGGGACTCCGAACACACATTCTTCTTAGAGGGGAAACAATAGTGTaGGAGCTGATTGGTATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LATPGFLSLGLRTHILLRGETIV*ELIGIA Trigger: TGCTATACCAATCAGCTCTCACACTATTGTTTCCCC...TCTAAGAAGAATGTGTGTTCGGAGTCCCAAGCTAAGGAATCCGGGAGTGGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR TCA 90 bp | TGCCTCAGGCCCAGTTACAGTTTGCACTCTTGGAAGCATCAAACCCTGGTGCTTGAGATGGCAAGGGAGTaGCTATACCATTTCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: CLRPSYSLHSWKHQTLVLEMARE*LYHFKI Trigger: GATTTTGAAATGGTATAGTCACTCCCTTGCCATCTC...AAGCACCAGGGTTTGATGCTTCCAAGAGTGCAAACTGTAACTGGGCCTGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR GCA 90 bp | ATTTGGGATAATAACCTGGCGCCCATGCACAGAGGACTGACTTGGCCAATAACTTCCCTTTCCCAGAAATaGTTGAGATCATGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IWDNNLAPMHRGLTWPITSLSQK*LRSWQV Trigger: CACCTGCCATGATCTCAAGCATTTCTGGGAAAGGGA...AGTTATTGGCCAAGTCAGTCCTCTGTGCATGGGCGCCAGGTTATTATCCCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CCA 90 bp | ATTTGGGATAATAACCTGGCGCCCATGCACAGAGGACTGACTTGGCCAATAACTAAATGCTTGAGATCATaGCAGGTGTTCCGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IWDNNLAPMHRGLTWPITKCLRS*QVFRQK Trigger: CTTCTGCCGGAACACCTGCCATGATCTCAAGCATTT...AGTTATTGGCCAAGTCAGTCCTCTGTGCATGGGCGCCAGGTTATTATCCCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CCA 90 bp | TGCAGGTGCTGCTTACAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCAAGTCCTCTCCCAGGTaGGGAAACAATAGTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CRCCLQPASTQDFISLHLKSSPR*GNNSVR Trigger: TCTCACACTATTGTTTCCCCACCTGGGAGAGGACTT...GAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTGTAAGCAGCACCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR TCA 90 bp | CAAGGAATGCTGCATGGAGCTTCGATATTAAATAAGCTATCTTTAGAGACATTTGCACTTGACCGCCTGTaGGGCATCTGTGCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGMLHGASILNKLSLETFALDRL*GICAAP Trigger: TGGGGCAGCACAGATGCCTCACAGGCGGTCAAGTGC...AAATGTCTCTAAAGATAGCTTATTTAATATCGAAGCTCCATGCAGCATTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAAAACAAGAATTCCATAAAGCTGTGTTTCCTAGGTGAAATGGTGGGGCAACCTGTGAGGCATCTGTaGTGCCCCAGGAGCCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: KENKNSIKLCFLGEMVGQPVRHL*CPRSQF Trigger: GAATTGGCTCCTGGGGCAGCACAGATGCCTCACAGG...TTGCCCCACCATTTCACCTAGGAAACACAGCTTTATGGAATTCTTGTTTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGTAAGTCCTCTCCCAGGTGGGGAAACAATAGTGTGAGAGCTGATTGGTATCACAGAGGACTGACTTaGCCAATAACTGCCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGKSSPRWGNNSVRADWYHRGLT*PITAIK Trigger: TTTGATGGCAGTTATTGGCCAAGTCAGTCCTCTGTG...ATACCAATCAGCTCTCACACTATTGTTTCCCCACCTGGGAGAGGACTTACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CCA 90 bp | TTGGTTAAAATAATTGCCTCAGGCCCAGTTACAGTTTGCACTCTTGGAAGCATCCTATGTTCCAAAGGATaGCTGGGGGTTCAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVKIIASGPVTVCTLGSILCSKG*LGVQVS Trigger: GGACACCTGAACCCCCAGCCATCCTTTGGAACATAG...GATGCTTCCAAGAGTGCAAACTGTAACTGGGCCTGAGGCAATTATTTTAACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR TCA 90 bp | CAGGAATTTGCACTGACTTCTAGCAAAGTGACCTCAGTGTTTTGCATCTTCTTGGCTTCCATTCTTCTCTaGGCTTTCTCAGTGCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QEFALTSSKVTSVFCIFLASILL*AFSVRF Trigger: GAAGCGCACTGAGAAAGCTCAGAGAAGAATGGAAGC...CAAGAAGATGCAAAACACTGAGGTCACTTTGCTAGAAGTCAGTGCAAATTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR TCA 90 bp | CTTACAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCTTCTCCCTTCCTTTGACCATGAAGGTTaGGGATTCCTCTTGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTASKYPGLYIIASLLPSFDHEG*GFLLVC Trigger: ACACACCAAGAGGAATCCTCAACCTTCATGGTCAAA...GGAAGGGAGAAGAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCATGCAGTTTATATAGCATTTTCACTTAGCACCCTCCACCTAGCAACCCCGCATGAAGGGATGTaGAGACATCGATTCAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KKHAVYIAFSLSTLHLATPHEGM*RHRFSR Trigger: TCGACTGAATCGATGTCTTCACATCCCTTCATGCGG...GGTTGCTAGGTGGAGGGTGCTAAGTGAAAATGCTATATAAACTGCATGCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCTTCTCCCTTCCCTTGTATAGAAGCAAGGAATaGTGCATGGAGCTTCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: QPASTQDFISLHLFSLPLYRSKE*CMELRY Trigger: ATATCGAAGCTCCATGCAGCATTCCTTGCTTCTATA...CAAGGGAAGGGAGAAGAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CCA 90 bp | TTAAATAAGCTATCTTTAGAGACATTTGGGATAATAACCTGGCGCCCATGCACACCAGTAGCAGTGGGCTaGACAAGAGAACCACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LNKLSLETFGIITWRPCTPVAVG*TREPLL Trigger: CAGTAGTGGTTCTCTTGTCCAGCCCACTGCTACTGG...TGTGCATGGGCGCCAGGTTATTATCCCAAATGTCTCTAAAGATAGCTTATTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR TCA 90 bp | CAAGGAATGCTGCATGGAGCTTCGATATTAAATAAGCTATCTTTAGAGACATTTCAAATGTGTCGCACTTaGCCGCCTGTGAGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGMLHGASILNKLSLETFQMCRT*PPVRHL Trigger: CAGATGCCTCACAGGCGGTCAAGTGCGACACATTTG...AAATGTCTCTAAAGATAGCTTATTTAATATCGAAGCTCCATGCAGCATTCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAAAACAAGAATTCCATAAAGCTGTGTTTCCTAGGTGAAATGGTGGGGCAATGGAATGGCCAGATATaGTTTGGCTGGGCTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KENKNSIKLCFLGEMVGQWNGQI*FGWADR Trigger: TCTGTCAGCCCAGCCAAAGCATATCTGGCCATTCCA...TTGCCCCACCATTTCACCTAGGAAACACAGCTTTATGGAATTCTTGTTTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR GCA 90 bp | CAGGAATTTGCACTGACTTCTAGCAAAGTGACCTCAGTGTTTTGCATCTTCTTGGGCCCAGTTACAGTTTaGACTCTTGGAAGCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QEFALTSSKVTSVFCIFLGPVTV*TLGSIK Trigger: TTTGATGCTTCCAAGAGTGCAAACTGTAACTGGGCC...CAAGAAGATGCAAAACACTGAGGTCACTTTGCTAGAAGTCAGTGCAAATTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR GCA 90 bp | TTAAATAAGCTATCTTTAGAGACATTTGGGATAATAACCTGGCGCCCATGCACAGTTATTGCTGTCAGGTaGGTCTGCCATACAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LNKLSLETFGIITWRPCTVIAVR*VCHTVP Trigger: AGGCACTGTATGGCAGACGCACCTGACAGCAATAAC...TGTGCATGGGCGCCAGGTTATTATCCCAAATGTCTCTAAAGATAGCTTATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAAAACAAGAATTCCATAAAGCTGTGTTTCCTAGGTGAAATGGTGGGGCAATTTGGGATAATAACCTaGCGCCCATGCACAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KENKNSIKLCFLGEMVGQFGIIT*RPCTED Trigger: GTCCTCTGTGCATGGGCGCCAGGTTATTATCCCAAA...TTGCCCCACCATTTCACCTAGGAAACACAGCTTTATGGAATTCTTGTTTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| 3UTR CAA 72 bp | CAGGACTTTATATCATTGCATCTCTTCTCCCTTCCCTaGGTTAAAATAATTGCCTCAGGCCCAGTTACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QDFISLHLFSLP*VKIIASGPVTV Trigger: AACTGTAACTGGGCCTGAGGCAATTATTTTAACCAAGGGAAGGGAGAAGAGATGCAATGATATAAAGTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444264.1 ENST00000640551.3 |
||
| CDS-3UTR TCA 90 bp | GGAGCTTCGATATTAAATAAGCTATCTTTAGAGACATTTGGGATAATAACCTGGCAGAGAACAACCGCATaGAGGGATGTGAAGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: GASILNKLSLETFGIITWQRTTA*RDVKTS Trigger: CGATGTCTTCACATCCCTTCATGCGGTTGTTCTCTG...CCAGGTTATTATCCCAAATGTCTCTAAAGATAGCTTATTTAATATCGAAGCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAAAACAAGAATTCCATAAAGCTGTGTTTCCTAGGTGAAATGGTGGGGCAAAGTGTGAGAGCTGATTaGTATAGCAAAGGGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KENKNSIKLCFLGEMVGQSVRAD*YSKGTQ Trigger: CTGAGTCCCTTTGCTATACCAATCAGCTCTCACACT...TTGCCCCACCATTTCACCTAGGAAACACAGCTTTATGGAATTCTTGTTTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CCA 90 bp | TTAAATAAGCTATCTTTAGAGACATTTGGGATAATAACCTGGCGCCCATGCACATACAGTTTGCACTCTTaGAAGCATCAAACCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNKLSLETFGIITWRPCTYSLHS*KHQTLV Trigger: CACCAGGGTTTGATGCTTCCAAGAGTGCAAACTGTA...TGTGCATGGGCGCCAGGTTATTATCCCAAATGTCTCTAAAGATAGCTTATTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR TCA 90 bp | CAAGGAATGCTGCATGGAGCTTCGATATTAAATAAGCTATCTTTAGAGACATTTTTTCCCAGAAATGCTTaGGATCATGGCAGGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGMLHGASILNKLSLETFFPRNA*DHGRCS Trigger: GGAACACCTGCCATGATCTCAAGCATTTCTGGGAAA...AAATGTCTCTAAAGATAGCTTATTTAATATCGAAGCTCCATGCAGCATTCCTTG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAAAACAAGAATTCCATAAAGCTGTGTTTCCTAGGTGAAATGGTGGGGCAAATCTTTAGAGACATTTaGGATAATAACCTGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KENKNSIKLCFLGEMVGQIFRDI*DNNLAP Trigger: GGGCGCCAGGTTATTATCCCAAATGTCTCTAAAGAT...TTGCCCCACCATTTCACCTAGGAAACACAGCTTTATGGAATTCTTGTTTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR TCA 90 bp | CAAGGAATGCTGCATGGAGCTTCGATATTAAATAAGCTATCTTTAGAGACATTTCAAAACAGAAGGCTTTaGTCCCCTGTACAACCTATG | + |
|
Preference number: 4 (lower is better) Translates to: QGMLHGASILNKLSLETFQNRRL*SPVQPM Trigger: CATAGGTTGTACAGGGGATCAAAGCCTTCTGTTTTG...AAATGTCTCTAAAGATAGCTTATTTAATATCGAAGCTCCATGCAGCATTCCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS TCA 90 bp | AGACATCGATTCAGTCGAACCAAATGTGTCGCACTTGACCGCCTGTaGGGCATCTGTGCTGCCCCAGGAGCCAATTCACGTTCAGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RHRFSRTKCVALDRL*GICAAPGANSRSAN Trigger: ATTTGCTGAACGTGAATTGGCTCCTGGGGCAGCACAGATGCCTCACAGGCGGTCAAGTGCGACACATTTGGTTCGACTGAATCGATGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CAA 90 bp | CCACTCCCGGATTCCTTAGCTTGGGACTCCGAACACACATTCTTCTTAGACCATCCAAATGTGTCGCACTaGACCGCCTGTGAGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PLPDSLAWDSEHTFFLDHPNVSH*TACEAS Trigger: AGATGCCTCACAGGCGGTCAAGTGCGACACATTTGG...ATGGTCTAAGAAGAATGTGTGTTCGGAGTCCCAAGCTAAGGAATCCGGGAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CAA 90 bp | TTGGCCACTCCCGGATTCCTTAGCTTGGGACTCCGAACACACATTCTTCTTAGACTTTCCCAGAAATGCTaGAGATCATGGCAGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LATPGFLSLGLRTHILLRLSQKC*RSWQVF Trigger: GAACACCTGCCATGATCTCAAGCATTTCTGGGAAAG...TCTAAGAAGAATGTGTGTTCGGAGTCCCAAGCTAAGGAATCCGGGAGTGGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCTTCTCCCTTCCCTTGGCACAGAGGACTGACTaGGCCAATAACTGCCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: QPASTQDFISLHLFSLPLAQRTD*ANNCHQ Trigger: TTGATGGCAGTTATTGGCCAAGTCAGTCCTCTGTGC...CAAGGGAAGGGAGAAGAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS TCA 90 bp | GGTGTATTGATTGTTCATCCCAGAGAACAACCGCATGAAGGGATGTaGAGACATCGATTCAGTCGAACCAAATGTGTCGCACTTGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: GVLIVHPREQPHEGM*RHRFSRTKCVALDR Trigger: GCGGTCAAGTGCGACACATTTGGTTCGACTGAATCGATGTCTTCACATCCCTTCATGCGGTTGTTCTCTGGGATGAACAATCAATACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CAA 90 bp | ATTTGGGATAATAACCTGGCGCCCATGCACAGAGGACTGACTTGGCCAATAACTATAGTATATAAGGCCTaGCAGGTGCTGCTTACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IWDNNLAPMHRGLTWPITIVYKA*QVLLTA Trigger: GGCTGTAAGCAGCACCTGCAAGGCCTTATATACTAT...AGTTATTGGCCAAGTCAGTCCTCTGTGCATGGGCGCCAGGTTATTATCCCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CAA 90 bp | TTGGTTAAAATAATTGCCTCAGGCCCAGTTACAGTTTGCACTCTTGGAAGCATCTCAGTGTCCTCTGGATaGTTCCGCAGCCTCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVKIIASGPVTVCTLGSISVSSG*FRSLSF Trigger: AAAGCTGAGGCTGCGGAACAATCCAGAGGACACTGA...GATGCTTCCAAGAGTGCAAACTGTAACTGGGCCTGAGGCAATTATTTTAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGTAAGTCCTCTCCCAGGTGGGGAAACAATAGTGTGAGAGCTGATTGGTATTTACAGTTTGCACTCTaGGAAGCATCAAACCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TGKSSPRWGNNSVRADWYLQFAL*EASNPG Trigger: ACCAGGGTTTGATGCTTCCAAGAGTGCAAACTGTAA...ATACCAATCAGCTCTCACACTATTGTTTCCCCACCTGGGAGAGGACTTACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CAA 90 bp | TACAGTTTGCACTCTTGGAAGCATCAAACCCTGGTGCTTCTGAACTTGAGAGATGCTCTCAGCCAACATTaGTCCTCTTTTCAGTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YSLHSWKHQTLVLLNLRDALSQH*SSFQCP Trigger: AGGACACTGAAAAGAGGACAAATGTTGGCTGAGAGC...ATCTCTCAAGTTCAGAAGCACCAGGGTTTGATGCTTCCAAGAGTGCAAACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGCAAGTACCCAGGACTTTATATCATTGCATCTCTTCTCCCTTCCCTTGAGTGACCTCAGTGTTTaGCATCTTCTTGTGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: QPASTQDFISLHLFSLPLSDLSV*HLLVSM Trigger: CATTGACACAAGAAGATGCAAAACACTGAGGTCACT...CAAGGGAAGGGAGAAGAGATGCAATGATATAAAGTCCTGGGTACTTGCTGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CAA 90 bp | CAGGAATTTGCACTGACTTCTAGCAAAGTGACCTCAGTGTTTTGCATCTTCTTGAGGCCCAGTTACAGTTaGCACTCTTGGAAGCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: QEFALTSSKVTSVFCIFLRPSYS*HSWKHQ Trigger: TTGATGCTTCCAAGAGTGCAAACTGTAACTGGGCCT...CAAGAAGATGCAAAACACTGAGGTCACTTTGCTAGAAGTCAGTGCAAATTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS TCA 90 bp | ACTTCTAGCAAAGTGACCTCAGTGTTTTGCATCTTCTTGTGTCAATaGAGCAGGAAGCTCTCAGCCAACATTTGTCCTCTTTTCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSSKVTSVFCIFLCQ*SRKLSANICPLFSV Trigger: GACACTGAAAAGAGGACAAATGTTGGCTGAGAGCTTCCTGCTTCATTGACACAAGAAGATGCAAAACACTGAGGTCACTTTGCTAGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CAA 90 bp | TACAGTTTGCACTCTTGGAAGCATCAAACCCTGGTGCTTCTGAACTTGAGAGATCTCTTCTCCCTTCCCTaGGTTAAAATAATTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YSLHSWKHQTLVLLNLRDLFSLP*VKIIAS Trigger: TGAGGCAATTATTTTAACCAAGGGAAGGGAGAAGAG...ATCTCTCAAGTTCAGAAGCACCAGGGTTTGATGCTTCCAAGAGTGCAAACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
||
| CDS-3UTR CAA 90 bp | TTAAATAAGCTATCTTTAGAGACATTTGGGATAATAACCTGGCGCCCATGCACACAGGACTTTATATCATaGCATCTCTTCTCCCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: LNKLSLETFGIITWRPCTQDFIS*HLFSLP Trigger: GGGAAGGGAGAAGAGATGCAATGATATAAAGTCCTG...TGTGCATGGGCGCCAGGTTATTATCCCAAATGTCTCTAAAGATAGCTTATTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
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| CDS TCA 72 bp | TTCAGTCGAACCAAATGTGTCGCACTTGACCGCCTGTaGGGCATCTGTGCTGCCCCAGGAGCCAATTCACGT | + |
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Preference number: 6 (lower is better) Translates to: FSRTKCVALDRL*GICAAPGANSR Trigger: ACGTGAATTGGCTCCTGGGGCAGCACAGATGCCTCACAGGCGGTCAAGTGCGACACATTTGGTTCGACTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
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| CDS TCA 72 bp | ATTGTTCATCCCAGAGAACAACCGCATGAAGGGATGTaGAGACATCGATTCAGTCGAACCAAATGTGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: IVHPREQPHEGM*RHRFSRTKCVA Trigger: TGCGACACATTTGGTTCGACTGAATCGATGTCTTCACATCCCTTCATGCGGTTGTTCTCTGGGATGAACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
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| CDS TCA 72 bp | GGGTGTATTGATTGTTCATCCCAGAGAACAACCGCATaGAGGGATGTGAAGACATCGATTCAGTCGAACCAA | + |
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Preference number: 6 (lower is better) Translates to: GCIDCSSQRTTA*RDVKTSIQSNQ Trigger: TTGGTTCGACTGAATCGATGTCTTCACATCCCTTCATGCGGTTGTTCTCTGGGATGAACAATCAATACACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
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| CDS CAA 72 bp | TTCACGTTCAGCAAATCAACAAGAACAAAGGAACATTaGTCCCTCGCAAGCCTTAACGCTGTGCCAGCAATT | + |
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Preference number: 6 (lower is better) Translates to: FTFSKSTRTKEH*SLASLNAVPAI Trigger: AATTGCTGGCACAGCGTTAAGGCTTGCGAGGGACAAATGTTCCTTTGTTCTTGTTGATTTGCTGAACGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640551.3 |
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| CDS TCA 72 bp | AAAGTGACCTCAGTGTTTTGCATCTTCTTGTGTCAATaGAGCAGGAAGCTCTCAGCCAACATTTGTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: KVTSVFCIFLCQ*SRKLSANICPL Trigger: AAGAGGACAAATGTTGGCTGAGAGCTTCCTGCTTCATTGACACAAGAAGATGCAAAACACTGAGGTCACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640551.3 |
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