Pregenerated sensors for FAM217A (Homo sapiens)
Ensembl gene IDs: ENSG00000145975Ensembl transcript IDs: ENST00000274673.8, ENST00000380188.2, ENST00000463904.1, ENST00000469157.5, ENST00000478714.1, ENST00000492651.5, ENST00000498677.5, ENST00000639338.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | AAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTaGTTTTGGGGGACTGTTAATAGTACCTGTGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: KFYSISHQATVW*FWGTVNSTCVL Trigger: CAAGACACAGGTACTATTAACAGTCCCCCAAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR GCA 90 bp | CTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTGGGCAGCCCGGTCGGCAGTaGAGGGCCTGCGAAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LFTSSTPYHIKQLFGDFGQPGRQ*RACEAR Trigger: GCGGGCTTCGCAGGCCCTGCACTGCCGACCGGGCTG...CCCAAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR CCA 90 bp | TCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTGGGGGACTGTTAATAGCGCCTCCGCGTGCGTaGCTGACGGCTTGGAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: STPYHIKQLFGDFGGLLIAPPRA*LTAWRA Trigger: CGCCCTCCAAGCCGTCAGCCACGCACGCGGAGGCGC...TATTAACAGTCCCCCAAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR TCA 90 bp | GGAATAATTAACCATATCTTAGTTGGGCTTCTTAGAGTAGATGTGTTCACATTGCTCCGCGTGCGTGGCTaGCGGCTTGGAGGGCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GIINHILVGLLRVDVFTLLRVRG*RLGGRP Trigger: GGGGCGCCCTCCAAGCCGTCAGCCACGCACGCGGAG...CAATGTGAACACATCTACTCTAAGAAGCCCAACTAAGATATGGTTAATTATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR CCA 90 bp | CATATCTTAGTTGGGCTTCTTAGAGTAGATGTGTTCACATTGAGATGTATGAAAGCGTGGCTGACGGCTTaGAGGGCGCCCCCTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HILVGLLRVDVFTLRCMKAWLTA*RAPPLP Trigger: CGGCAGAGGGGGCGCCCTCCAAGCCGTCAGCCACGC...TTTCATACATCTCAATGTGAACACATCTACTCTAAGAAGCCCAACTAAGATATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR GCA 90 bp | ATTAACCATATCTTAGTTGGGCTTCTTAGAGTAGATGTGTTCACATTGAGATGTCCGAGCGCCTCCGCGTaGGTGGCTGACGGCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: INHILVGLLRVDVFTLRCPSASA*VADGLE Trigger: CTCCAAGCCGTCAGCCACGCACGCGGAGGCGCTCGG...ACATCTCAATGTGAACACATCTACTCTAAGAAGCCCAACTAAGATATGGTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR CCA 90 bp | GCAGTGCTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATCATTGGAGACCTCCATaGCAGACATCTTGTGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: AVLFTSSTPYHIKQLFGDHWRPP*QTSCGD Trigger: GTCTCCACAAGATGTCTGCCATGGAGGTCTCCAATG...ATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAGCACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR TCA 90 bp | GCAGTGCTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATCATTTGGCTCCTCGGTaGAAGGTTCCTCAACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVLFTSSTPYHIKQLFGDHLAPR*KVPQHF Trigger: AAAATGTTGAGGAACCTTTCACCGAGGAGCCAAATG...ATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAGCACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR TCA 90 bp | CTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTGGGAGTCAGAGGTATAGGTaGAACTGGCATTGGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LFTSSTPYHIKQLFGDFGSQRYR*NWHWRP Trigger: AGGTCTCCAATGCCAGTTTCACCTATACCTCTGACT...CCCAAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR GCA 90 bp | CATATCTTAGTTGGGCTTCTTAGAGTAGATGTGTTCACATTGAGATGTATGAAAAATTTTGCCACCTGCTaGTCCATCCCTTCCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HILVGLLRVDVFTLRCMKNFATC*SIPSSW Trigger: CCAGCTGGAAGGGATGGAGCAGCAGGTGGCAAAATT...TTTCATACATCTCAATGTGAACACATCTACTCTAAGAAGCCCAACTAAGATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR GCA 90 bp | GCAGTGCTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTCAACAGAGGTTTCTaGAGGGTCCACTGTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVLFTSSTPYHIKQLFGDFNRGF*RVHCHF Trigger: AAAGTGACAGTGGACCCTGCAGAAACCTCTGTTGAA...ATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAGCACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR GCA 90 bp | ATTAACCATATCTTAGTTGGGCTTCTTAGAGTAGATGTGTTCACATTGAGATGTGTTAATTTTGCCACCTaGTGCTCCATCCCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: INHILVGLLRVDVFTLRCVNFAT*CSIPSS Trigger: GCTGGAAGGGATGGAGCAGCAGGTGGCAAAATTAAC...ACATCTCAATGTGAACACATCTACTCTAAGAAGCCCAACTAAGATATGGTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR TCA 90 bp | GCAGTGCTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATAATAGTAGGTTTGAATaGGAGTTCTTGGCATGGACT | + |
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Preference number: 4 (lower is better) Translates to: AVLFTSSTPYHIKQLFGDNSRFE*EFLAWT Trigger: AGTCCATGCCAAGAACTCTCATTCAAACCTACTATT...ATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAGCACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR GCA 90 bp | TCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTGGGGGACTGTTAATAGAGAGGGCTAAATTGTaGAAGTCTAGAGCACTGAAA | + |
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Preference number: 4 (lower is better) Translates to: STPYHIKQLFGDFGGLLIERAKL*KSRALK Trigger: TTTCAGTGCTCTAGACTTGCACAATTTAGCCCTCTC...TATTAACAGTCCCCCAAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR CCA 90 bp | CTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTGGGTGGAAATACTTCATTTaGCTCCTCGGTGAAAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFTSSTPYHIKQLFGDFGWKYFI*LLGERF Trigger: GAACCTTTCACCGAGGAGCCAAATGAAGTATTTCCA...CCCAAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR CCA 90 bp | GCAGTGCTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTCCAATTGTCAGATTTaGAGAGGGCTAAATTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AVLFTSSTPYHIKQLFGDSNCQI*RGLNCA Trigger: TGCACAATTTAGCCCTCTCCAAATCTGACAATTGGA...ATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAGCACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR CCA 90 bp | TCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTGGGGGACTGTTAATAAGAGTCGCAAAGTTTTaGCTGTCTCACTTTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: STPYHIKQLFGDFGGLLIRVAKF*LSHFWC Trigger: ACACCAAAAGTGAGACAGCCAAAACTTTGCGACTCT...TATTAACAGTCCCCCAAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR TCA 90 bp | CTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTGGGAGAAACAGGTACTTCTaGATCCAAATTCCAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFTSSTPYHIKQLFGDFGRNRYF*IQIPVR Trigger: TCTCACTGGAATTTGGATTCAGAAGTACCTGTTTCT...CCCAAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR TCA 90 bp | GTGCTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTTCTACACAAGGTATCTaGAGACTCAAAGAGTCGCAA | + |
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Preference number: 4 (lower is better) Translates to: VLFTSSTPYHIKQLFGDFSTQGI*RLKESQ Trigger: TTGCGACTCTTTGAGTCTTCAGATACCTTGTGTAGA...AAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAGCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR TCA 90 bp | GGAATAATTAACCATATCTTAGTTGGGCTTCTTAGAGTAGATGTGTTCACATTGTTTTTGTTCAATGGGTaGGCAGCACTTATCCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: GIINHILVGLLRVDVFTLFLFNG*AALILS Trigger: GCTAAGGATAAGTGCTGCTCACCCATTGAACAAAAA...CAATGTGAACACATCTACTCTAAGAAGCCCAACTAAGATATGGTTAATTATTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR TCA 90 bp | ATTAACCATATCTTAGTTGGGCTTCTTAGAGTAGATGTGTTCACATTGAGATGTCAAGCAACTGTTTGGTaGTTTTGGGGGACTGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: INHILVGLLRVDVFTLRCQATVW*FWGTVN Trigger: ATTAACAGTCCCCCAAAATCACCAAACAGTTGCTTG...ACATCTCAATGTGAACACATCTACTCTAAGAAGCCCAACTAAGATATGGTTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR GCA 90 bp | GCAGTGCTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTTGTTGTAGCTGTTaGTCTGTTTCCTTAAAATCC | + |
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Preference number: 4 (lower is better) Translates to: AVLFTSSTPYHIKQLFGDFCCSC*SVSLKS Trigger: GGATTTTAAGGAAACAGAGCAACAGCTACAACAAAA...ATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAGCACTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR GCA 90 bp | GTGCTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTAAAGTTTCTCTTCGGTaGCTTAATTTCTTCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VLFTSSTPYHIKQLFGDFKVSLR*LNFFLL Trigger: CAGAAGGAAGAAATTAAGGCACCGAAGAGAAACTTT...AAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAGCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR CCA 90 bp | CATATCTTAGTTGGGCTTCTTAGAGTAGATGTGTTCACATTGAGATGTATGAAACATCAGTTGCTCCACTaGAATTTCCAAATAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: HILVGLLRVDVFTLRCMKHQLLH*NFQIVL Trigger: AAGAACTATTTGGAAATTCCAGTGGAGCAACTGATG...TTTCATACATCTCAATGTGAACACATCTACTCTAAGAAGCCCAACTAAGATATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR GCA 90 bp | GGAATAATTAACCATATCTTAGTTGGGCTTCTTAGAGTAGATGTGTTCACATTGTATATTTGCCAGCATTaGTCCAATTCCGTTTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: GIINHILVGLLRVDVFTLYICQH*SNSVLK Trigger: CTTTAAAACGGAATTGGAGCAATGCTGGCAAATATA...CAATGTGAACACATCTACTCTAAGAAGCCCAACTAAGATATGGTTAATTATTCC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS GCA 90 bp | GCGTGCTCTCCCGGTGCGCCGCCCCGAGGCCCGAGCGCCTCCGCGTaGGTGGCTGACGGCTTGGAGGGCGCCCCCTCTGCCGCGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ACSPGAPPRGPSASA*VADGLEGAPSAAAF Trigger: GAAGGCCGCGGCAGAGGGGGCGCCCTCCAAGCCGTCAGCCACGCACGCGGAGGCGCTCGGGCCTCGGGGCGGCGCACCGGGAGAGCACGC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000274673.8 ENST00000478714.1 ENST00000492651.5 ENST00000498677.5 ENST00000639338.1 |
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| CDS CCA 90 bp | GCTCTCCCGGTGCGCCGCCCCGAGGCCCGAGCGCCTCCGCGTGCGTaGCTGACGGCTTGGAGGGCGCCCCCTCTGCCGCGGCCTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: ALPVRRPEARAPPRA*LTAWRAPPLPRPSC Trigger: GCAGGAAGGCCGCGGCAGAGGGGGCGCCCTCCAAGCCGTCAGCCACGCACGCGGAGGCGCTCGGGCCTCGGGGCGGCGCACCGGGAGAGC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000274673.8 ENST00000478714.1 ENST00000492651.5 ENST00000498677.5 |
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| CDS CCA 90 bp | GCTCTCCCGGTGCGCCGCCCCGAGGCCCGAGCGCCTCCGCGTGCGTaGCTGACGGCTTGGAGGGCGCCCCCTCTGCCGCGGCCTTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: ALPVRRPEARAPPRA*LTAWRAPPLPRPSF Trigger: GAAAGAAGGCCGCGGCAGAGGGGGCGCCCTCCAAGCCGTCAGCCACGCACGCGGAGGCGCTCGGGCCTCGGGGCGGCGCACCGGGAGAGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639338.1 |
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| CDS TCA 90 bp | TCCCGGTGCGCCGCCCCGAGGCCCGAGCGCCTCCGCGTGCGTGGCTaGCGGCTTGGAGGGCGCCCCCTCTGCCGCGGCCTTCTTTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: SRCAAPRPERLRVRG*RLGGRPLCRGLLSG Trigger: ACCAGAAAGAAGGCCGCGGCAGAGGGGGCGCCCTCCAAGCCGTCAGCCACGCACGCGGAGGCGCTCGGGCCTCGGGGCGGCGCACCGGGA 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639338.1 |
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| CDS CCA 90 bp | CGCCGCCCCGAGGCCCGAGCGCCTCCGCGTGCGTGGCTGACGGCTTaGAGGGCGCCCCCTCTGCCGCGGCCTTCTTTCTGGTGCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: RRPEARAPPRAWLTA*RAPPLPRPSFWCQE Trigger: TTCCTGGCACCAGAAAGAAGGCCGCGGCAGAGGGGGCGCCCTCCAAGCCGTCAGCCACGCACGCGGAGGCGCTCGGGCCTCGGGGCGGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639338.1 |
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| CDS TCA 90 bp | CCCCTCTGCCGCGGCCTTCTTTCTGGTGCCAGGAAAGGTGTAACTTaGAGTCCCTTTCTGGTCGTCAGACCCCTCCCACCTCATTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: PLCRGLLSGARKGVT*SPFLVVRPLPPHLL Trigger: CAACAAATGAGGTGGGAGGGGTCTGACGACCAGAAAGGGACTTCAAGTTACACCTTTCCTGGCACCAGAAAGAAGGCCGCGGCAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639338.1 |
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| CDS CCA 90 bp | AACACCTTGCCTTCTGGAAGCCAGCTGATCTTGTCACACCCACCATaGCGAGGGGGAAGAAGAAGGTATTCAGGAGACACAGCAACCCTC | + |
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Preference number: 5 (lower is better) Translates to: NTLPSGSQLILSHPP*RGGRRRYSGDTATL Trigger: GAGGGTTGCTGTGTCTCCTGAATACCTTCTTCTTCCCCCTCGCCATGGTGGGTGTGACAAGATCAGCTGGCTTCCAGAAGGCAAGGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380188.2 ENST00000639338.1 |
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| CDS-3UTR CAA 90 bp | GCAGTGCTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTGCGTGGCTGACGGCTaGGAGGGCGCCCCCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: AVLFTSSTPYHIKQLFGDCVADG*EGAPSA Trigger: GGCAGAGGGGGCGCCCTCCAAGCCGTCAGCCACGCA...ATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAGCACTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS CCA 90 bp | GGAGCTAATCTTCTCTCTGTGAACATTACTGAACACCTTGCCTTCTaGAAGCCAGCTGATCTTGTCACACCCACCATGGCGAGGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GANLLSVNITEHLAF*KPADLVTPTMARGK Trigger: CTTCCCCCTCGCCATGGTGGGTGTGACAAGATCAGCTGGCTTCCAGAAGGCAAGGTGTTCAGTAATGTTCACAGAGAGAAGATTAGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380188.2 ENST00000639338.1 |
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| CDS TCA 90 bp | CTGGAATTTCCAAATAGTTTTTCTGGTGCCAGGAAAGGTGTAACTTaGAGTCCCTTTCTGGTCGTCAGACCCCTCCCACCTCATTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LEFPNSFSGARKGVT*SPFLVVRPLPPHLL Trigger: CAACAAATGAGGTGGGAGGGGTCTGACGACCAGAAAGGGACTTCAAGTTACACCTTTCCTGGCACCAGAAAAACTATTTGGAAATTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380188.2 |
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| CDS TCA 90 bp | CTTAATTTCTTCCTTCTGATTTTCGGGAAAAGTCAGAGGTATAGGTaGAACTGGCATTGGAGACCTCCATGGCAGACATCTTGTGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: LNFFLLIFGKSQRYR*NWHWRPPWQTSCGD Trigger: GTCTCCACAAGATGTCTGCCATGGAGGTCTCCAATGCCAGTTTCACCTATACCTCTGACTTTTCCCGAAAATCAGAAGGAAGAAATTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000274673.8 ENST00000380188.2 ENST00000639338.1 |
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| CDS TCA 90 bp | GACCTCCATGGCAGACATCTTGTGGAGACCATTTTAACCATTGATTaGTTTGTATGGCCAATAGTAGGTTTGAATGAGAGTTCTTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: DLHGRHLVETILTID*FVWPIVGLNESSWH Trigger: ATGCCAAGAACTCTCATTCAAACCTACTATTGGCCATACAAATCAATCAATGGTTAAAATGGTCTCCACAAGATGTCTGCCATGGAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000274673.8 ENST00000380188.2 ENST00000639338.1 |
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| CDS-3UTR CAA 90 bp | TCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTGGGGGACTGTTAATAAAGAGTCGCAAAGTTTaGGCTGTCTCACTTTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: STPYHIKQLFGDFGGLLIKSRKV*AVSLLV Trigger: CACCAAAAGTGAGACAGCCAAAACTTTGCGACTCTT...TATTAACAGTCCCCCAAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR CAA 90 bp | ATTAACCATATCTTAGTTGGGCTTCTTAGAGTAGATGTGTTCACATTGAGATGTACTTTTGGTGTAGCTTaGGAGGAAGAGGGTCGTTCA | + |
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Preference number: 5 (lower is better) Translates to: INHILVGLLRVDVFTLRCTFGVA*EEEGRS Trigger: TGAACGACCCTCTTCCTCCAAAGCTACACCAAAAGT...ACATCTCAATGTGAACACATCTACTCTAAGAAGCCCAACTAAGATATGGTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR CAA 90 bp | CTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTGGGTGGCCAATAGTAGGTTaGAATGAGAGTTCTTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: LFTSSTPYHIKQLFGDFGWPIVG*NESSWH Trigger: ATGCCAAGAACTCTCATTCAAACCTACTATTGGCCA...CCCAAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR CAA 90 bp | GTGCTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTTTCCAATTGTCAGATTaGGAGAGGGCTAAATTGTGC | + |
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Preference number: 5 (lower is better) Translates to: VLFTSSTPYHIKQLFGDFFQLSD*ERAKLC Trigger: GCACAATTTAGCCCTCTCCAAATCTGACAATTGGAA...AAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAGCAC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR CAA 90 bp | GGAATAATTAACCATATCTTAGTTGGGCTTCTTAGAGTAGATGTGTTCACATTGACATCAAGCAACTGTTaGGTGATTTTGGGGGACTGT | + |
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Preference number: 5 (lower is better) Translates to: GIINHILVGLLRVDVFTLTSSNC*VILGDC Trigger: ACAGTCCCCCAAAATCACCAAACAGTTGCTTGATGT...CAATGTGAACACATCTACTCTAAGAAGCCCAACTAAGATATGGTTAATTATTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS TCA 90 bp | CTCTTCTCTATGGTACTTCCTTCATTAAGAGGACAATTCCATAATTaGAAGATCCCTTGTTTACTATTCTGTGTTAATCTGGGCATTTCC | + |
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Preference number: 5 (lower is better) Translates to: LFSMVLPSLRGQFHN*KIPCLLFCVNLGIS Trigger: GGAAATGCCCAGATTAACACAGAATAGTAAACAAGGGATCTTTCAATTATGGAATTGTCCTCTTAATGAAGGAAGTACCATAGAGAAGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469157.5 |
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| CDS-3UTR CAA 90 bp | GTGCTTTTCACAAGTTCTACTCCATATCACATCAAGCAACTGTTTGGTGATTTTCTATATTTGCCAGCATaGCTCCAATTCCGTTTTAAA | + |
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Preference number: 5 (lower is better) Translates to: VLFTSSTPYHIKQLFGDFLYLPA*LQFRFK Trigger: TTTAAAACGGAATTGGAGCAATGCTGGCAAATATAG...AAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAACTTGTGAAAAGCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS-3UTR CAA 90 bp | CATATCTTAGTTGGGCTTCTTAGAGTAGATGTGTTCACATTGAGATGTATGAAAGTTTCAAATTCCAATTaGGAGCAGGTAATGTTTCAC | + |
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Preference number: 5 (lower is better) Translates to: HILVGLLRVDVFTLRCMKVSNSN*EQVMFH Trigger: GTGAAACATTACCTGCTCCAAATTGGAATTTGAAAC...TTTCATACATCTCAATGTGAACACATCTACTCTAAGAAGCCCAACTAAGATATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274673.8 |
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| CDS CAA 90 bp | GCGCCGCCCCGAGGCCCGAGCGCCTCCGCGTGCGTGGCTGACGGCTaGGAGGGCGCCCCCTCTGCCGCGGCCTTCTTTCTGGTGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: APPRGPSASACVADG*EGAPSAAAFFLVPG Trigger: TCCTGGCACCAGAAAGAAGGCCGCGGCAGAGGGGGCGCCCTCCAAGCCGTCAGCCACGCACGCGGAGGCGCTCGGGCCTCGGGGCGGCGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639338.1 |
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| CDS CCA 72 bp | GAGGCCCGAGCGCCTCCGCGTGCGTGGCTGACGGCTTaGAGGGCGCCCCCTCTGCCGCGGCCTTCTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: EARAPPRAWLTA*RAPPLPRPSFW Trigger: CCAGAAAGAAGGCCGCGGCAGAGGGGGCGCCCTCCAAGCCGTCAGCCACGCACGCGGAGGCGCTCGGGCCTC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639338.1 |
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| CDS CAA 90 bp | CCCCCTCTGCCGCGGCCTTCTTTCTGGTGCCAGGAAAGGTGTAACTaGAAGTCCCTTTCTGGTCGTCAGACCCCTCCCACCTCATTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PPLPRPSFWCQERCN*KSLSGRQTPPTSFV Trigger: AACAAATGAGGTGGGAGGGGTCTGACGACCAGAAAGGGACTTCAAGTTACACCTTTCCTGGCACCAGAAAGAAGGCCGCGGCAGAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639338.1 |
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| CDS TCA 72 bp | CGCGGCCTTCTTTCTGGTGCCAGGAAAGGTGTAACTTaGAGTCCCTTTCTGGTCGTCAGACCCCTCCCACCT | + |
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Preference number: 6 (lower is better) Translates to: RGLLSGARKGVT*SPFLVVRPLPP Trigger: AGGTGGGAGGGGTCTGACGACCAGAAAGGGACTTCAAGTTACACCTTTCCTGGCACCAGAAAGAAGGCCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639338.1 |
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| CDS CCA 72 bp | CTTCTCTCTGTGAACATTACTGAACACCTTGCCTTCTaGAAGCCAGCTGATCTTGTCACACCCACCATGGCG | + |
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Preference number: 6 (lower is better) Translates to: LLSVNITEHLAF*KPADLVTPTMA Trigger: CGCCATGGTGGGTGTGACAAGATCAGCTGGCTTCCAGAAGGCAAGGTGTTCAGTAATGTTCACAGAGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380188.2 ENST00000639338.1 |
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| CDS CAA 90 bp | GGAGACACAGCAACCCTCTGTGTTAATCTGGGCATTTCCTCAGTTTaGGACGATGAAGCTCTTTCCTCAGTTCTGCTGAGGACTGCACTG | + |
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Preference number: 6 (lower is better) Translates to: GDTATLCVNLGISSV*DDEALSSVLLRTAL Trigger: CAGTGCAGTCCTCAGCAGAACTGAGGAAAGAGCTTCATCGTCCAAAACTGAGGAAATGCCCAGATTAACACAGAGGGTTGCTGTGTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380188.2 |
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| CDS TCA 72 bp | CCAAATAGTTTTTCTGGTGCCAGGAAAGGTGTAACTTaGAGTCCCTTTCTGGTCGTCAGACCCCTCCCACCT | + |
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Preference number: 6 (lower is better) Translates to: PNSFSGARKGVT*SPFLVVRPLPP Trigger: AGGTGGGAGGGGTCTGACGACCAGAAAGGGACTTCAAGTTACACCTTTCCTGGCACCAGAAAAACTATTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380188.2 |
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| CDS CAA 72 bp | GCAACCCTCTGTGTTAATCTGGGCATTTCCTCAGTTTaGGACGATGAAGCTCTTTCCTCAGTTCTGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: ATLCVNLGISSV*DDEALSSVLLR Trigger: CCTCAGCAGAACTGAGGAAAGAGCTTCATCGTCCAAAACTGAGGAAATGCCCAGATTAACACAGAGGGTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380188.2 |
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| CDS CAA 90 bp | ACAGAGGTTTCTGCAGGGTCCACTGTCACTTTCCAATTGTCAGATTaGGAGAGGGCTAAATTGTGCAAGTCTAGAGCACTGAAAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: TEVSAGSTVTFQLSD*ERAKLCKSRALKGG Trigger: TCCTCCTTTCAGTGCTCTAGACTTGCACAATTTAGCCCTCTCCAAATCTGACAATTGGAAAGTGACAGTGGACCCTGCAGAAACCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000274673.8 ENST00000380188.2 ENST00000639338.1 |
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| CDS CAA 72 bp | TCTGCAGGGTCCACTGTCACTTTCCAATTGTCAGATTaGGAGAGGGCTAAATTGTGCAAGTCTAGAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: SAGSTVTFQLSD*ERAKLCKSRAL Trigger: CAGTGCTCTAGACTTGCACAATTTAGCCCTCTCCAAATCTGACAATTGGAAAGTGACAGTGGACCCTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000274673.8 ENST00000380188.2 ENST00000639338.1 |
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| CDS CAA 90 bp | AAGTGTTCAACAGAGGTTTCTGCAGGGTCCACTGTCACTTTCCAATaGTCAGATTTGGAGAGGGCTAAATTGTGCAAGTCTAGAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: KCSTEVSAGSTVTFQ*SDLERAKLCKSRAL Trigger: CAGTGCTCTAGACTTGCACAATTTAGCCCTCTCCAAATCTGACAATTGGAAAGTGACAGTGGACCCTGCAGAAACCTCTGTTGAACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000274673.8 ENST00000380188.2 ENST00000639338.1 |
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| CDS TCA 72 bp | TTCCTTCTGATTTTCGGGAAAAGTCAGAGGTATAGGTaGAACTGGCATTGGAGACCTCCATGGCAGACATCT | + |
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Preference number: 6 (lower is better) Translates to: FLLIFGKSQRYR*NWHWRPPWQTS Trigger: AGATGTCTGCCATGGAGGTCTCCAATGCCAGTTTCACCTATACCTCTGACTTTTCCCGAAAATCAGAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000274673.8 ENST00000380188.2 ENST00000639338.1 |
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| CDS GCA 72 bp | GAAATGGTCCATGTCCAGACGCAAGACTGGAGTTTCTaGCACAAATCCCCAAATGACTTGGCAGGATATTTT | + |
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Preference number: 6 (lower is better) Translates to: EMVHVQTQDWSF*HKSPNDLAGYF Trigger: AAAATATCCTGCCAAGTCATTTGGGGATTTGTGGCAGAAACTCCAGTCTTGCGTCTGGACATGGACCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380188.2 ENST00000469157.5 |
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| CDS CAA 72 bp | ACAGAGGTTTCTGCAGGGTCCACTGTCACTTTCCAATaGTCAGATTTGGAGAGGGCTAAATTGTGCAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: TEVSAGSTVTFQ*SDLERAKLCKS Trigger: AGACTTGCACAATTTAGCCCTCTCCAAATCTGACAATTGGAAAGTGACAGTGGACCCTGCAGAAACCTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000274673.8 ENST00000380188.2 ENST00000639338.1 |
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| CDS TCA 72 bp | GCAGTTGATAGGACAACAGGAACTCTTGTAGTGATCTaGAGTAGGCATGCAGCTTCTAACCACACTCTGATA | + |
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Preference number: 6 (lower is better) Translates to: AVDRTTGTLVVI*SRHAASNHTLI Trigger: TATCAGAGTGTGGTTAGAAGCTGCATGCCTACTTCAGATCACTACAAGAGTTCCTGTTGTCCTATCAACTGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463904.1 |
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| CDS CAA 72 bp | CCACACTCTGATAGAGTGATCAGTGGAGGCATGGCTTaGATTCTTCATTGTGTTGTATGCACCAATAACAAC | + |
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Preference number: 6 (lower is better) Translates to: PHSDRVISGGMA*ILHCVVCTNNN Trigger: GTTGTTATTGGTGCATACAACACAATGAAGAATCAAAGCCATGCCTCCACTGATCACTCTATCAGAGTGTGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463904.1 |
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| CDS GCA 72 bp | TGGAATTTCCAAATAGTTCTTGTTAATTTTGCCACCTaGTGCTCCATCCCTTCCAGCTGGGAGGTTTTTATT | + |
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Preference number: 6 (lower is better) Translates to: WNFQIVLVNFAT*CSIPSSWEVFI Trigger: AATAAAAACCTCCCAGCTGGAAGGGATGGAGCAGCAGGTGGCAAAATTAACAAGAACTATTTGGAAATTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000274673.8 ENST00000492651.5 ENST00000639338.1 |
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| CDS CAA 90 bp | TCCTTTGCTTTATCTGAAGACGAGTTGAGAAATGAAAGGATCATGTaGATTAGCTGTCACTATGGTGACCTCTTCTCTATGGTACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SFALSEDELRNERIM*ISCHYGDLFSMVLP Trigger: AGGAAGTACCATAGAGAAGAGGTCACCATAGTGACAGCTAATCAACATGATCCTTTCATTTCTCAACTCGTCTTCAGATAAAGCAAAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469157.5 |
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| CDS CAA 90 bp | TCTATTGTCTGTCTTATGCCGTCCTTTGCTTTATCTGAAGACGAGTaGAGAAATGAAAGGATCATGTTGATTAGCTGTCACTATGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: SIVCLMPSFALSEDE*RNERIMLISCHYGD Trigger: GTCACCATAGTGACAGCTAATCAACATGATCCTTTCATTTCTCAACTCGTCTTCAGATAAAGCAAAGGACGGCATAAGACAGACAATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469157.5 |
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| CDS CAA 72 bp | GTATGCACCAATAACAACTTAAACTCCTTCCCTCTATaGTCTGTCTTATGCCGTCCTTTGCTTTATCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: VCTNNNLNSFPL*SVLCRPLLYLK Trigger: CTTCAGATAAAGCAAAGGACGGCATAAGACAGACAATAGAGGGAAGGAGTTTAAGTTGTTATTGGTGCATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463904.1 |
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| CDS TCA 72 bp | GGCAGACATCTTGTGGAGACCATTTTAACCATTGATTaGTTTGTATGGCCAATAGTAGGTTTGAATGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: GRHLVETILTID*FVWPIVGLNES Trigger: ACTCTCATTCAAACCTACTATTGGCCATACAAATCAATCAATGGTTAAAATGGTCTCCACAAGATGTCTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000274673.8 ENST00000380188.2 ENST00000639338.1 |
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| CDS CAA 72 bp | TTATCTGAAGACGAGTTGAGAAATGAAAGGATCATGTaGATTAGCTGTCACTATGGTGACCTCTTCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: LSEDELRNERIM*ISCHYGDLFSM Trigger: CATAGAGAAGAGGTCACCATAGTGACAGCTAATCAACATGATCCTTTCATTTCTCAACTCGTCTTCAGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469157.5 |
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| CDS CCA 72 bp | TTTGTATGGCCAATAGTAGGTTTGAATGAGAGTTCTTaGCATGGACTTAAAATAGAACTTTTGGGATTCTTA | + |
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Preference number: 6 (lower is better) Translates to: FVWPIVGLNESS*HGLKIELLGFL Trigger: TAAGAATCCCAAAAGTTCTATTTTAAGTCCATGCCAAGAACTCTCATTCAAACCTACTATTGGCCATACAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000274673.8 ENST00000380188.2 ENST00000639338.1 |
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