RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM193A (Homo sapiens)

Ensembl gene IDs: ENSG00000125386

Ensembl transcript IDs: ENST00000324666.9, ENST00000382839.7, ENST00000502458.5, ENST00000505311.5, ENST00000506120.1, ENST00000506904.1, ENST00000512465.5, ENST00000513350.2, ENST00000513898.5, ENST00000545951.5, ENST00000637812.2

Found 1545 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCAAGCACCACGGCTCTGGGGCGCCAGCGAGGGGCGTGGCTCTTaGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCAGG +
Preference number: 1 (lower is better)
Translates to: WQAPRLWGASEGRGS*GGAAWPASRVSLSR
Trigger: CCTGGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 90 bp CAGGCAGCACCAGCTCCGCACAGCCCTTGGCAAGCACCACGGCTCTaGGGCGCCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGG +
Preference number: 1 (lower is better)
Translates to: QAAPAPHSPWQAPRL*GASEGRGSWGGAAW
Trigger: CCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTGCCAAGGGCTGTGCGGAGCTGGTGCTGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 90 bp CCCGCCGCCTCTGCTCCTCCTGGAGGTGCAGGTGCTCCCGGGCCCTaGCCTCTGCTTCTAGGCGAGCTTTCTCCTCCAGCTTCCTTTGCT +
Preference number: 1 (lower is better)
Translates to: PAASAPPGGAGAPGP*PLLLGELSPPASFA
Trigger: AGCAAAGGAAGCTGGAGGAGAAAGCTCGCCTAGAAGCAGAGGCCAGGGCCCGGGAGCACCTGCACCTCCAGGAGGAGCAGAGGCGGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR CCA 90 bp TCTTCTTCCTCATCCTCCTCCTCCTCCCGCCGCCTCTGCTCCTCCTaGAGGTGCAGGTGCTCCCGGGCCCTGGCCTCTGCTTCTAGGCGA +
Preference number: 1 (lower is better)
Translates to: SSSSSSSSSRRLCSS*RCRCSRALASASRR
Trigger: TCGCCTAGAAGCAGAGGCCAGGGCCCGGGAGCACCTGCACCTCCAGGAGGAGCAGAGGCGGCGGGAGGAGGAGGAGGATGAGGAAGAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR TCA 90 bp CATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATaGTGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGC +
Preference number: 1 (lower is better)
Translates to: HDRTGRNAEATEPRG*CKLLSGHGPGLRGR
Trigger: GCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 90 bp TCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGGTGGGAGGACTTaGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCG +
Preference number: 1 (lower is better)
Translates to: SGHGPGLRGRGGGRT*RELLFQSDSTELQS
Trigger: CGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR TCA 90 bp GGCACAGGAGAGCTGAGTGACGGCCGATACCCCGGTGAGGACACATaGCAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATG +
Preference number: 1 (lower is better)
Translates to: GTGELSDGRYPGEDT*QDRAQCRGNGATWM
Trigger: CATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCACCGGGGTATCGGCCGTCACTCAGCTCTCCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 90 bp CAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGGTaGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGA +
Preference number: 1 (lower is better)
Translates to: QTPIWPRPRPPRPRW*EDLAGTTVPIRQHR
Trigger: TCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 90 bp ATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTaGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCAC +
Preference number: 1 (lower is better)
Translates to: MQTPIWPRPRPPRPR*WEDLAGTTVPIRQH
Trigger: GTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 90 bp CGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGTaGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCAGCACCA +
Preference number: 1 (lower is better)
Translates to: RRSLTHRLHAHELTA*AEHQLLGLGFQAAP
Trigger: TGGTGCTGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR TCA 90 bp CAGCTCTTAGCTTCTGAAGCTCCTGAAGCCGCTGAAATTCCTCCTTaGAACGATCCTCCTCTTCTTCCTCATCCTCCTCCTCCTCCCGCC +
Preference number: 1 (lower is better)
Translates to: QLLASEAPEAAEIPP*NDPPLLPHPPPPPA
Trigger: GGCGGGAGGAGGAGGAGGATGAGGAAGAAGAGGAGGATCGTTTCAAGGAGGAATTTCAGCGGCTTCAGGAGCTTCAGAAGCTAAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR CCA 90 bp CATCAGCCCCTAGCCCTGGCCTGGGCTCTGAGTGGTTCATATGCCTaGATGGGGAGTGAGAAGAGGTTTCTGGTTCTTCAGTTTGCTCTA +
Preference number: 1 (lower is better)
Translates to: HQPLALAWALSGSYA*MGSEKRFLVLQFAL
Trigger: TAGAGCAAACTGAAGAACCAGAAACCTCTTCTCACTCCCCATCCAGGCATATGAACCACTCAGAGCCCAGGCCAGGGCTAGGGGCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR TCA 90 bp AGCCCTGGCCTGGGCTCTGAGTGGTTCATATGCCTGGATGGGGAGTaGGAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTG +
Preference number: 1 (lower is better)
Translates to: SPGLGSEWFICLDGE*EEVSGSSVCSSEPL
Trigger: CAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTCTCACTCCCCATCCAGGCATATGAACCACTCAGAGCCCAGGCCAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR GCA 90 bp GCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTaGAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCCCTT +
Preference number: 1 (lower is better)
Translates to: ARVLLTGLVSELFIN*NKSSTLRWSTTLSL
Trigger: AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR CCA 90 bp CCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTCACTaGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCAC +
Preference number: 1 (lower is better)
Translates to: PLLMPCSLRCTRAAH*FGFGAIYKLQQILH
Trigger: GTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR CCA 90 bp GGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTaGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTAC +
Preference number: 1 (lower is better)
Translates to: GLFLTFSFCKGSYTS*LQVRGIKHKQRNVY
Trigger: GTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 90 bp CCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTGTTGCTGCCTaGAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTT +
Preference number: 1 (lower is better)
Translates to: PLWMFPELGTDSVAA*KFLVSMSNLGQSLL
Trigger: AAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACATCCACAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR TCA 90 bp CTCCGTGTTAATACAGTCGTACACTCTATAACAGACTTGATGGTGTaGGTACTGGGTGGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGG +
Preference number: 1 (lower is better)
Translates to: LRVNTVVHSITDLMV*VLGGLVFNFLVLQG
Trigger: CCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAGTACTCACACCATCAAGTCTGTTATAGAGTGTACGACTGTATTAACACGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR TCA 90 bp GCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCCCAGCCCGCCTAGGGTaGGACGCAGGGGCACAGGAG +
Preference number: 2 (lower is better)
Translates to: ARGVALGVVQPGLPLACPPARLG*DAGAQE
Trigger: CTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGG...GGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR GCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACTCCTGGAGGTGCAGGTaGTCCCGGGCCCTGGCCTCT +
Preference number: 2 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYSWRCR*SRALAS
Trigger: AGAGGCCAGGGCCCGGGAGCACCTGCACCTCCAGGA...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR CCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACTGGGGTGGTGCAGCCTaGCCTGCCTCTCGCGTGTCC +
Preference number: 2 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYWGGAA*PASRVS
Trigger: GGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCA...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp CTCCTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATGGGGTGGTGCAGCCTaGCCTGCCTCTCGCGTGTCC +
Preference number: 2 (lower is better)
Translates to: LLAGSLLALLVCLSFCLPWGGAA*PASRVS
Trigger: GGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCA...TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR CCA 90 bp CTCCTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCACGCCTCTGCTCCTCCTaGAGGTGCAGGTGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: LLAGSLLALLVCLSFCLPRLCSS*RCRCSR
Trigger: CCGGGAGCACCTGCACCTCCAGGAGGAGCAGAGGCG...TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR GCA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTTGCTCCTCCTGGAGGTaGAGGTGCTCCCGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFCSSWR*RCSRAL
Trigger: CAGGGCCCGGGAGCACCTGCACCTCCAGGAGGAGCA...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR GCA 90 bp GCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTCCTTCCTCCCGCCGCCTCTaGTCCTCCTGGAGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: AGSLLALLVCLSFCLPFPSSRRL*SSWRCR
Trigger: CCTGCACCTCCAGGAGGAGCAGAGGCGGCGGGAGGA...AGGAAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCAGAGGGGCGTGGCTCTTaGGGTGGTGCAGCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: HELTAWAEHQLLGLGFQAEGRGS*GGAAWP
Trigger: AGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTC...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTCAAGCACCACGGCTCTaGGGCGCCAGCGAGGGGCGT +
Preference number: 2 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRAQAPRL*GASEGR
Trigger: ACGCCCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTG...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp GCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTCCTGGTGCTCCCGGGCCCTaGCCTCTGCTTCTAGGCGAG +
Preference number: 2 (lower is better)
Translates to: AGSLLALLVCLSFCLPFPGAPGP*PLLLGE
Trigger: CTCGCCTAGAAGCAGAGGCCAGGGCCCGGGAGCACC...AGGAAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR CAA 90 bp ATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGGTGGGAGGACTaGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATC +
Preference number: 2 (lower is better)
Translates to: IWPRPRPPRPRWWED*AGTTVPIRQHRATI
Trigger: GATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR GCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCTGGTGCAGCCTGGCCTaGCTCTCGCGTGTCCCTCTC +
Preference number: 2 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPWCSLA*LSRVPL
Trigger: GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCA...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR GCA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCTCCTCCAGCTTCCTTTaGTTATGCCTTGCTCGCTTC +
Preference number: 2 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGSSSFL*LCLARF
Trigger: GAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGA...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR CCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTCCGAGGCCGCGGTGGTaGGAGGACTTGGCGGGAACT +
Preference number: 2 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRAPRPRW*EDLAGT
Trigger: AGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGG...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR GCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTTGGTGCAGCCTGGCCTaGCTCTCGCGTGTCCCTCTC +
Preference number: 2 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRAWCSLA*LSRVPL
Trigger: GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCA...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp GCCTGGCCTGCCTCTCGCGTGTCCCTCTCCAGGGAGTCCTCATTCAGTGGGCAGTCCTCCACCCTCCGATaGTCAACGACGCTTTCCCTT +
Preference number: 2 (lower is better)
Translates to: AWPASRVSLSRESSFSGQSSTLR*STTLSL
Trigger: AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGA...CTGCCCACTGAATGAGGACTCCCTGGAGAGGGACACGCGAGAGGCAGGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR CCA 90 bp AGGGGACTCTGCCAGCACCAGCTTGCTGTTCTGCTGATGCTCACCGGGAGAGGTGCCTTTGACTCAGTCTaGGCCCGGGGCTTGGACTGC +
Preference number: 2 (lower is better)
Translates to: RGLCQHQLAVLLMLTGRGAFDSV*ARGLDC
Trigger: GCAGTCCAAGCCCCGGGCCCAGACTGAGTCAAAGGC...ACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR TCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTCGGCCGATACCCCGGTaGGGACACATGACAGGACAG +
Preference number: 2 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRARPIPR*GHMTGQ
Trigger: CTGTCCTGTCATGTGTCCTCACCGGGGTATCGGCCG...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGGCGTGGCTCTTGGGGTaGTGCAGCCTGGCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: SYNRRSLTHRLHAHELTAAWLLG*CSLACL
Trigger: GAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGC...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTGGAGTCTCTGGTGTCGCGCCAGCGAGGGGCGTaGCTCTTGGGGTGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: CCFPFTSLGRRNLESLVSRQRGA*LLGWCS
Trigger: GCTGCACCACCCCAAGAGCCACGCCCCTCGCTGGCG...CGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR TCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGCCAGCCCGCCTAGGGTaGGACGCAGGGGCACAGGAG +
Preference number: 2 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQPARLG*DAGAQE
Trigger: CTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGG...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAAGCACCACGGCTCTaGGGCGCCAGCGAGGGGCGT +
Preference number: 2 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRQAPRL*GASEGR
Trigger: ACGCCCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTG...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAACAAGCACCACGGCTCTaGGGCGCCAGCGAGGGGCGT +
Preference number: 2 (lower is better)
Translates to: EDLAGTTVPIRQHRATIEQAPRL*GASEGR
Trigger: ACGCCCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTG...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGCCGAGGCCGCGGTGGTaGGAGGACTTGGCGGGAACT +
Preference number: 2 (lower is better)
Translates to: LATSQGDQTQTAQRVHSEPRPRW*EDLAGT
Trigger: AGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGG...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTGGAGTCTCTGGTGTCGCCGAGGCCGCGGTGGTaGGAGGACTTGGCGGGAACT +
Preference number: 2 (lower is better)
Translates to: CCFPFTSLGRRNLESLVSPRPRW*EDLAGT
Trigger: AGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGG...CGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR CCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACACCTCCGAGGCCGCGGTaGTGGGAGGACTTGGCGGGA +
Preference number: 2 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETPPRPR*WEDLAG
Trigger: TCCCGCCAAGTCCTCCCACCACCGCGGCCTCGGAGG...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGGGATCTTACACAAGCTaGCTACAAGTCAGGGGGATC +
Preference number: 2 (lower is better)
Translates to: VDDANSYLATAQASEAAVGSYTS*LQVRGI
Trigger: GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCC...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTCGCCAGCGAGGGGCGTaGCTCTTGGGGTGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSRQRGA*LLGWCS
Trigger: GCTGCACCACCCCAAGAGCCACGCCCCTCGCTGGCG...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGCCAGCGAGGGGCGTaGCTCTTGGGGTGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: GILHKLATSQGDQTQTAQRQRGA*LLGWCS
Trigger: GCTGCACCACCCCAAGAGCCACGCCCCTCGCTGGCG...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACAAGCACCACGGCTCTaGGGCGCCAGCGAGGGGCGT +
Preference number: 2 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTQAPRL*GASEGR
Trigger: ACGCCCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTG...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTCACGAGCTAACGGCGTaGGCCGAGCATCAACTTCTC +
Preference number: 2 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRAHELTA*AEHQLL
Trigger: GAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp CTCCTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCAGGAGTCCTCATTCAGTaGGCAGCAAAGGTGGCTTTT +
Preference number: 2 (lower is better)
Translates to: LLAGSLLALLVCLSFCLPGVLIQ*AAKVAF
Trigger: AAAAGCCACCTTTGCTGCCCACTGAATGAGGACTCC...TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGGGGGCAGTCTTTACTTaGCCTCTCCTTCTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: VDDANSYLATAQASEAAVGAVFT*PLLLLL
Trigger: AAGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCC...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR GCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCCAGGACAGGGCGCAATaGAGAGGCAACGGAGCCACG +
Preference number: 2 (lower is better)
Translates to: SATCTLGDSRLWRTKEACQDRAQ*RGNGAT
Trigger: CGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTG...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACATGGGGTGGTGCAGCCTaGCCTGCCTCTCGCGTGTCC +
Preference number: 2 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTWGGAA*PASRVS
Trigger: GGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCA...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGCGCCAGCGAGGGGCGTaGCTCTTGGGGTGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRRQRGA*LLGWCS
Trigger: GCTGCACCACCCCAAGAGCCACGCCCCTCGCTGGCG...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGGCTCCTCTTTCCTCTTaGTCAGCCGTAAGCGAAGCT +
Preference number: 2 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRAPLSS*SAVSEA
Trigger: AGCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGC...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR CCA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTGCTCCTCTTTCCTCTTaGTCAGCCGTAAGCGAAGCT +
Preference number: 2 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFAPLSS*SAVSEA
Trigger: AGCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGC...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR GCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAATGGTGCAGCCTGGCCTaGCTCTCGCGTGTCCCTCTC +
Preference number: 2 (lower is better)
Translates to: GILHKLATSQGDQTQTAQWCSLA*LSRVPL
Trigger: GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCA...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR GCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGCAGGACAGGGCGCAATaGAGAGGCAACGGAGCCACG +
Preference number: 2 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQQDRAQ*RGNGAT
Trigger: CGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTG...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTGGAGTCTCTGGTGTCGATGCAAACTCCTATCTaGCCACGGCCCAGGCCTCCG +
Preference number: 2 (lower is better)
Translates to: CCFPFTSLGRRNLESLVSMQTPI*PRPRPP
Trigger: CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCAT...CGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR CCA 90 bp AGGGGACTCTGCCAGCACCAGCTTGCTGTTCTGCTGATGCTCACCGGGAGAGGTGGAGTCCTCATTCAGTaGGCAGCAAAGGTGGCTTTT +
Preference number: 2 (lower is better)
Translates to: RGLCQHQLAVLLMLTGRGGVLIQ*AAKVAF
Trigger: AAAAGCCACCTTTGCTGCCCACTGAATGAGGACTCC...ACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR TCA 90 bp CTGGGTGGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGGGGCACAGGAGAGCTaGGTGACGGCCGATACCCCG +
Preference number: 2 (lower is better)
Translates to: LGGLVFNFLVLQGILHKLGAQES*VTADTP
Trigger: CGGGGTATCGGCCGTCACTCAGCTCTCCTGTGCCCC...CAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR TCA 90 bp GGGAGGAGAAATTTGGAGTCTCTGGTGTCGACGGGGTCTGCAGCATCCCCATCATGCCTGGATGGGGAGTaGGAAGAGGTTTCTGGTTCT +
Preference number: 2 (lower is better)
Translates to: GRRNLESLVSTGSAASPSCLDGE*EEVSGS
Trigger: AGAACCAGAAACCTCTTCTCACTCCCCATCCAGGCA...TGATGGGGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATTTCTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR TCA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACTTCTTGCCCTTTGGCTaGGGGGACTCTGCCAGCACC +
Preference number: 2 (lower is better)
Translates to: TELQSKESHAQTTRTRANFLPFG*GDSAST
Trigger: GGTGCTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAA...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR CCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAATGGGGTGGTGCAGCCTaGCCTGCCTCTCGCGTGTCC +
Preference number: 2 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQWGGAA*PASRVS
Trigger: GGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCA...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp GGGAGGAGAAATTTGGAGTCTCTGGTGTCGACGGGGTCTGCAGCATCCCCATCAATCAACTTCTCGGTCTaGGGTTTCAGGCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: GRRNLESLVSTGSAASPSINFSV*GFRQHQ
Trigger: CTGGTGCTGCCTGAAACCCCAGACCGAGAAGTTGAT...TGATGGGGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATTTCTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR CCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCCACGAGCTAACGGCGTaGGCCGAGCATCAACTTCTC +
Preference number: 2 (lower is better)
Translates to: SATCTLGDSRLWRTKEACHELTA*AEHQLL
Trigger: GAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCAGCCTTTGACTCAGTCTaGGCCCGGGGCTTGGACTGC +
Preference number: 2 (lower is better)
Translates to: ELLFQSDSTELQSKESHAAFDSV*ARGLDC
Trigger: GCAGTCCAAGCCCCGGGCCCAGACTGAGTCAAAGGC...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR TCA 90 bp ATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTCGGCCGATACCCCGGTaGGGACACATGACAGGACAG +
Preference number: 2 (lower is better)
Translates to: ILHKLATSQGDQTQTAQRRPIPR*GHMTGQ
Trigger: CTGTCCTGTCATGTGTCCTCACCGGGGTATCGGCCG...ACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR GCA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGTGGTGCAGCCTGGCCTaGCTCTCGCGTGTCCCTCTC +
Preference number: 2 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKWCSLA*LSRVPL
Trigger: GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCA...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR GCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAATGGCTCTTGGGGTGGTaGAGCCTGGCCTGCCTCTCG +
Preference number: 2 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQWLLGW*SLACLS
Trigger: CGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCA...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTGACTCTGTTGCTGCCTaGAAATTTCTAGTGAGCATG +
Preference number: 2 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFDSVAA*KFLVSM
Trigger: CATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTC...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CCA 90 bp GGGAGGAGAAATTTGGAGTCTCTGGTGTCGACGGGGTCTGCAGCATCCCCATCAAGTGGTTCATATGCCTaGATGGGGAGTGAGAAGAGG +
Preference number: 2 (lower is better)
Translates to: GRRNLESLVSTGSAASPSSGSYA*MGSEKR
Trigger: CCTCTTCTCACTCCCCATCCAGGCATATGAACCACT...TGATGGGGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATTTCTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR TCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGACGGAGCCACGTGGATaGTGCAAACTCCTATCTGGC +
Preference number: 2 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQTEPRG*CKLLSG
Trigger: GCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGT...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR GCA 90 bp GCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTCCTAGGAACAGACTCTGTTaGTGCCTGGAAATTTCTAGT +
Preference number: 2 (lower is better)
Translates to: AGSLLALLVCLSFCLPFPRNRLC*CLEISS
Trigger: ACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCT...AGGAAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR GCA 90 bp TCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTCCTTGCTCGCTTCGCTaGACGCGTGCTGCTCACTGG +
Preference number: 2 (lower is better)
Translates to: SVCSSEPLWMFPELGTDSPCSLR*TRAAHW
Trigger: CCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGG...AGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CCA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAATCAACTTCTCGGTCTaGGGTTTCAGGCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: EDLAGTTVPIRQHRATIEINFSV*GFRQHQ
Trigger: CTGGTGCTGCCTGAAACCCCAGACCGAGAAGTTGAT...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAGGATCTTACACAAGCTaGCTACAAGTCAGGGGGATC +
Preference number: 2 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRGSYTS*LQVRGI
Trigger: GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCC...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CAA 90 bp TGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTaGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTC +
Preference number: 2 (lower is better)
Translates to: CLCLARFAARVLLTG*VSELFINCNKSSTL
Trigger: GAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR TCA 90 bp ATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTACGGAGCCACGTGGATaGTGCAAACTCCTATCTGGC +
Preference number: 2 (lower is better)
Translates to: ILHKLATSQGDQTQTAQRTEPRG*CKLLSG
Trigger: GCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGT...ACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR TCA 90 bp GTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGCCCGGTGAGGACACATaGCAGGACAGGGCGCAATGC +
Preference number: 2 (lower is better)
Translates to: VFNFLVLQGILHKLATSQPGEDT*QDRAQC
Trigger: GCATTGCGCCCTGTCCTGTCATGTGTCCTCACCGGG...CTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR TCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCCATCAATTGAATTGTTaGCTCTGTCTCCTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPHQLNC*LCLLSS
Trigger: AGAAGAAAGGAGACAGAGTCAACAATTCAATTGATG...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR GCA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACAGCTTCCTTTGCTTATaGCTTGCTCGCTTCGCTGCA +
Preference number: 2 (lower is better)
Translates to: TELQSKESHAQTTRTRANSFLCL*LARFAA
Trigger: TGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCT...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR CCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGGGTGGTGGGAGGACTTaGCGGGAACTACTGTTCCAA +
Preference number: 2 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRGGGRT*RELLFQ
Trigger: TTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACC...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTGGCAACGGAGCCACGTaGATGATGCAAACTCCTATC +
Preference number: 2 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSGNGAT*MMQTPI
Trigger: GATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCAGGCAACGGAGCCACGTaGATGATGCAAACTCCTATC +
Preference number: 2 (lower is better)
Translates to: ELLFQSDSTELQSKESHAGNGAT*MMQTPI
Trigger: GATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTACGCCTCTGCTCCTCCTaGAGGTGCAGGTGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLRLCSS*RCRCSR
Trigger: CCGGGAGCACCTGCACCTCCAGGAGGAGCAGAGGCG...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR TCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTAAAGACATCATCAATTaGATTGTTGACTCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRAKDIIN*IVDSVS
Trigger: GGAGACAGAGTCAACAATTCAATTGATGATGTCTTT...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR TCA 90 bp CTGTCACCCAGGCATGATCTCGGCTCACTGGAACCTCCATCTTCCAGGCTCAAGTGCCAATTGAATTGTTaGCTCTGTCTCCTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: LSPRHDLGSLEPPSSRLKCQLNC*LCLLSS
Trigger: AGAAGAAAGGAGACAGAGTCAACAATTCAATTGGCA...CTTGAGCCTGGAAGATGGAGGTTCCAGTGAGCCGAGATCATGCCTGGGTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
3UTR-3UTR GCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCATCGCTGCACGCGTGCTaGTCACTGGTTTGGTTTCGG +
Preference number: 2 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPSLHAC*SLVWFR
Trigger: CCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGA...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR GCA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCTCCTCGCTGGCTCGCTaGTGGCCTTGCTGGTCTGCC +
Preference number: 2 (lower is better)
Translates to: SSISTLSRSISLGRKTSSSSLAR*WPCWSA
Trigger: GGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGA...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
3UTR-3UTR CCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGATCAACTTCTCGGTCTaGGGTTTCAGGCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRINFSV*GFRQHQ
Trigger: CTGGTGCTGCCTGAAACCCCAGACCGAGAAGTTGAT...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACACACGAGCTAACGGCGTaGGCCGAGCATCAACTTCTC +
Preference number: 2 (lower is better)
Translates to: GLVFNFLVLQGILHKLATHELTA*AEHQLL
Trigger: GAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR GCA 90 bp TCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTCCTTTGCTTATGCCTTaGTCGCTTCGCTGCACGCGT +
Preference number: 2 (lower is better)
Translates to: SVCSSEPLWMFPELGTDSPLLMP*SLRCTR
Trigger: ACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGG...AGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAATCAACTTCTCGGTCTaGGGTTTCAGGCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQINFSV*GFRQHQ
Trigger: CTGGTGCTGCCTGAAACCCCAGACCGAGAAGTTGAT...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCGTAATTCTGGCGCTTTaGGAGGCTGAGGTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIVILAL*EAEVGR
Trigger: TCTGCCCACCTCAGCCTCCCAAAGCGCCAGAATTAC...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505311.5
3UTR-3UTR CCA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGACTCTGTTGCTGCCTaGAAATTTCTAGTGAGCATG +
Preference number: 2 (lower is better)
Translates to: TELQSKESHAQTTRTRANDSVAA*KFLVSM
Trigger: CATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTC...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR CCA 90 bp TCTAGCAGAATCCAAGCAGAACCTTTTGAAATATTCCACTTCCCTCTCTGTCTCTCCTCCACCCTCCGATaGTCAACGACGCTTTCCCTT +
Preference number: 2 (lower is better)
Translates to: SSRIQAEPFEIFHFPLCLSSTLR*STTLSL
Trigger: AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGA...GAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CCA 90 bp GAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTTGGCCTCTCCTTACGCGTGCTGCTCACTaGTTTGGTTTCGGAGCTATT +
Preference number: 2 (lower is better)
Translates to: EISSEHVQLGAVFTWPLLTRAAH*FGFGAI
Trigger: AATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT...AAGGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR TCA 90 bp TGGAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTTGGCCTCTCCGCTGAAATTCCTCCTTaGAACGATCCTCCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: WKFLVSMSNLGQSLLGLSAEIPP*NDPPLL
Trigger: AAGAAGAGGAGGATCGTTTCAAGGAGGAATTTCAGC...GGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR GCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACATTAACTTTCTCGTTCTaGAAGGGATCTTACACAAGC +
Preference number: 2 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETLTFSF*KGSYTS
Trigger: GCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAA...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR GCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAAAACAGACTCTGTTGCTaGCTGGAAATTTCTAGTGAG +
Preference number: 2 (lower is better)
Translates to: GILHKLATSQGDQTQTAQNRLCC*LEISSE
Trigger: CTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTT...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR TCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAATTGACTTTTCGTCCTTaGTGTGGTTCAGCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQLTFRP*CGSAAF
Trigger: AAAAGCAGCTGAACCACATCAAGGACGAAAAGTCAA...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR GCA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCTCCTCCAGCTTCCTTTaGTTATGCCTTGCTCGCTTC +
Preference number: 2 (lower is better)
Translates to: SSISTLSRSISLGRKTSSSSSFL*LCLARF
Trigger: GAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGA...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
3UTR-3UTR TCA 90 bp TCTAGCAGAATCCAAGCAGAACCTTTTGAAATATTCCACTTCCCTCTCTGTCTCTTGACTTTTCGTCCTTaGTGTGGTTCAGCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: SSRIQAEPFEIFHFPLCLLTFRP*CGSAAF
Trigger: AAAAGCAGCTGAACCACATCAAGGACGAAAAGTCAA...GAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CCA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCCCATTTCCTTCTTTATaGTGCTGCATGATGTCGAAG +
Preference number: 2 (lower is better)
Translates to: SSISTLSRSISLGRKTSSPFPSL*CCMMSK
Trigger: CTTCGACATCATGCAGCACCATAAAGAAGGAAATGG...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513898.5
3UTR CCA 72 bp CCACGGCTCTGGGGCGCCAGCGAGGGGCGTGGCTCTTaGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCC +
Preference number: 3 (lower is better)
Translates to: PRLWGASEGRGS*GGAAWPASRVS
Trigger: GGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGGCGCCCCAGAGCCGTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 72 bp CCAGCTCCGCACAGCCCTTGGCAAGCACCACGGCTCTaGGGCGCCAGCGAGGGGCGTGGCTCTTGGGGTGGT +
Preference number: 3 (lower is better)
Translates to: PAPHSPWQAPRL*GASEGRGSWGG
Trigger: ACCACCCCAAGAGCCACGCCCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTGCCAAGGGCTGTGCGGAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 72 bp CTGGGGTTTCAGGCAGCACCAGCTCCGCACAGCCCTTaGCAAGCACCACGGCTCTGGGGCGCCAGCGAGGGG +
Preference number: 3 (lower is better)
Translates to: LGFQAAPAPHSP*QAPRLWGASEG
Trigger: CCCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTGCCAAGGGCTGTGCGGAGCTGGTGCTGCCTGAAACCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR GCA 72 bp TCTTCTTCCTCATCCTCCTCCTCCTCCCGCCGCCTCTaGTCCTCCTGGAGGTGCAGGTGCTCCCGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: SSSSSSSSSRRL*SSWRCRCSRAL
Trigger: CAGGGCCCGGGAGCACCTGCACCTCCAGGAGGAGCAGAGGCGGCGGGAGGAGGAGGAGGATGAGGAAGAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR CCA 72 bp GGCCCAGGCCTCCGAGGCCGCGGTGGTGGGAGGACTTaGCGGGAACTACTGTTCCAATCCGACAGCACAGAG +
Preference number: 3 (lower is better)
Translates to: GPGLRGRGGGRT*RELLFQSDSTE
Trigger: CTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGGAGGCCTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 72 bp ATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGGTaGGAGGACTTGGCGGGAACTACTGTTCCAATCCGA +
Preference number: 3 (lower is better)
Translates to: IWPRPRPPRPRW*EDLAGTTVPIR
Trigger: TCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 72 bp CCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTaGTGGGAGGACTTGGCGGGAACTACTGTTCCAATC +
Preference number: 3 (lower is better)
Translates to: PIWPRPRPPRPR*WEDLAGTTVPI
Trigger: GATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 72 bp TCTGCTCCTCCTGGAGGTGCAGGTGCTCCCGGGCCCTaGCCTCTGCTTCTAGGCGAGCTTTCTCCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: SAPPGGAGAPGP*PLLLGELSPPA
Trigger: AGCTGGAGGAGAAAGCTCGCCTAGAAGCAGAGGCCAGGGCCCGGGAGCACCTGCACCTCCAGGAGGAGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CAA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGCTCCGCACAGCCCTaGGCAAGCACCACGGCTCTG +
Preference number: 3 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPSSAQP*ASTTAL
Trigger: CAGAGCCGTGGTGCTTGCCAAGGGCTGTGCGGAGCT...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CAA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGCGGTGGTGGGAGGACTaGGCGGGAACTACTGTTCCA +
Preference number: 3 (lower is better)
Translates to: VDDANSYLATAQASEAAVRWWED*AGTTVP
Trigger: TGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR TCA 72 bp GAGCTGAGTGACGGCCGATACCCCGGTGAGGACACATaGCAGGACAGGGCGCAATGCAGAGGCAACGGAGCC +
Preference number: 3 (lower is better)
Translates to: ELSDGRYPGEDT*QDRAQCRGNGA
Trigger: GGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCACCGGGGTATCGGCCGTCACTCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CAA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTACGAGGGGCGTGGCTCTaGGGGTGGTGCAGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELRGAWL*GWCSLA
Trigger: GGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCG...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR TCA 72 bp ACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATaGTGCAAACTCCTATCTGGCCACGGCCCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: TGRNAEATEPRG*CKLLSGHGPGL
Trigger: GAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 72 bp CAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTaGATGATGCAAACTCCTATCTGGCCACGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: QDRAQCRGNGAT*MMQTPIWPRPR
Trigger: CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR TCA 72 bp CTCTGTGATGGACATGAGGTCGACCACCTTAGCCTTTaGCTCAGTCTGGGCCCGGGGCTTGGACTGCCCCTC +
Preference number: 3 (lower is better)
Translates to: LCDGHEVDHLSL*LSLGPGLGLPL
Trigger: GAGGGGCAGTCCAAGCCCCGGGCCCAGACTGAGTCAAAGGCTAAGGTGGTCGACCTCATGTCCATCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CAA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCCGAGGGGCGTGGCTCTaGGGGTGGTGCAGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRRGAWL*GWCSLA
Trigger: GGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCG...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CAA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACGAGGGGCGTGGCTCTaGGGGTGGTGCAGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTRGAWL*GWCSLA
Trigger: GGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCG...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CAA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGAGCTCCGCACAGCCCTaGGCAAGCACCACGGCTCTG +
Preference number: 3 (lower is better)
Translates to: SYNRRSLTHRLHAHELTASSAQP*ASTTAL
Trigger: CAGAGCCGTGGTGCTTGCCAAGGGCTGTGCGGAGCT...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 72 bp CTCACGCACAGACTACACGCACACGAGCTAACGGCGTaGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAG +
Preference number: 3 (lower is better)
Translates to: LTHRLHAHELTA*AEHQLLGLGFQ
Trigger: CTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR-3UTR CAA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTCCTTTGCTTATGCCTaGCTCGCTTCGCTGCACGCG +
Preference number: 3 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSSFAYA*LASLHA
Trigger: CGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGA...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR-3UTR CAA 90 bp AGGGGACTCTGCCAGCACCAGCTTGCTGTTCTGCTGATGCTCACCGGGAGAGGTCTCCTCCAGCTTCCTTaGCTTATGCCTTGCTCGCTT +
Preference number: 3 (lower is better)
Translates to: RGLCQHQLAVLLMLTGRGLLQLP*LMPCSL
Trigger: AAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG...ACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CAA 90 bp GAAACGATCCTCCTCTTCTTCCTCATCCTCCTCCTCCTCCCGCCGCCTCTGCTCCTCCTCCAGCTTCCTTaGCTTATGCCTTGCTCGCTT +
Preference number: 3 (lower is better)
Translates to: ETILLFFLILLLLPPPLLLLQLP*LMPCSL
Trigger: AAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG...GAGCAGAGGCGGCGGGAGGAGGAGGAGGATGAGGAAGAAGAGGAGGATCGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR CCA 72 bp GCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTaGAGTCTCTGGTGTCGACGGGGTCTGCAGCATCCC +
Preference number: 3 (lower is better)
Translates to: AASHSPPWGGEI*SLWCRRGLQHP
Trigger: GGGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CAA 90 bp CTGTCACCCAGGCATGATCTCGGCTCACTGGAACCTCCATCTTCCAGGCTCAAGTGCTCCTCTTTCCTCTaGGTCAGCCGTAAGCGAAGC +
Preference number: 3 (lower is better)
Translates to: LSPRHDLGSLEPPSSRLKCSSFL*VSRKRS
Trigger: GCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGCA...CTTGAGCCTGGAAGATGGAGGTTCCAGTGAGCCGAGATCATGCCTGGGTGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
3UTR GCA 72 bp CTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTaGACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCT +
Preference number: 3 (lower is better)
Translates to: LQLPLLMPCSLR*TRAAHWFGFGA
Trigger: AGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CAA 90 bp AGGGGACTCTGCCAGCACCAGCTTGCTGTTCTGCTGATGCTCACCGGGAGAGGTGTTGATAGACAGTCTTaGTCGGGTCTGTCTAGCAGA +
Preference number: 3 (lower is better)
Translates to: RGLCQHQLAVLLMLTGRGVDRQS*SGLSSR
Trigger: TCTGCTAGACAGACCCGACAAAGACTGTCTATCAAC...ACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR CCA 72 bp CTAGCCCTGGCCTGGGCTCTGAGTGGTTCATATGCCTaGATGGGGAGTGAGAAGAGGTTTCTGGTTCTTCAG +
Preference number: 3 (lower is better)
Translates to: LALAWALSGSYA*MGSEKRFLVLQ
Trigger: CTGAAGAACCAGAAACCTCTTCTCACTCCCCATCCAGGCATATGAACCACTCAGAGCCCAGGCCAGGGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CAA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTGTGCTGCTCACTGGTTaGGTTTCGGAGCTATTTATA +
Preference number: 3 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFVLLTG*VSELFI
Trigger: TATAAATAGCTCCGAAACCAAACCAGTGAGCAGCAC...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR CCA 72 bp AAGAGAGTGGCTCATGCTGCTTCCCATTCACCTCCTTaGGGAGGAGAAATTTGGAGTCTCTGGTGTCGACGG +
Preference number: 3 (lower is better)
Translates to: KRVAHAASHSPP*GGEIWSLWCRR
Trigger: CCGTCGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCATGAGCCACTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CAA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGCGGTGGTGGGAGGACTaGGCGGGAACTACTGTTCCA +
Preference number: 3 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRRWWED*AGTTVP
Trigger: TGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR TCA 72 bp CTCACCGGGAGAGGTGGGCTCCATAGGGGTTGGGTTTaGCTTTTCGTCCTTGATGTGGTTCAGCTGCTTTTT +
Preference number: 3 (lower is better)
Translates to: LTGRGGLHRGWV*LFVLDVVQLLF
Trigger: AAAAAGCAGCTGAACCACATCAAGGACGAAAAGTCAAACCCAACCCCTATGGAGCCCACCTCTCCCGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR GCA 72 bp ATTTTTCTTGTTCTTGCCCTTTGGCTGAGGGGACTCTaGCAGCACCAGCTTGCTGTTCTGCTGATGCTCACC +
Preference number: 3 (lower is better)
Translates to: IFLVLALWLRGL*QHQLAVLLMLT
Trigger: GGTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAGAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CAA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACCTCGGAGACAGTAGATaGTGGAGAACAAAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: TELQSKESHAQTTRTRANLGDSR*WRTKEA
Trigger: GGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAG...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 72 bp ATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTCACTaGTTTGGTTTCGGAGCTATTTATAAACTGCAACAA +
Preference number: 3 (lower is better)
Translates to: MPCSLRCTRAAH*FGFGAIYKLQQ
Trigger: TTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CAA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAATTGGGGAGGAGAAATTaGGAGTCTCTGGTGTCGACG +
Preference number: 3 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQLGRRN*ESLVST
Trigger: CGTCGACACCAGAGACTCCAAATTTCTCCTCCCCAA...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR GCA 72 bp CTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTaGAACAAATCCTCCACCCTCCGATGGTCAACGACG +
Preference number: 3 (lower is better)
Translates to: LLTGLVSELFIN*NKSSTLRWSTT
Trigger: CGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CAA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTAAAATTGGACCAGTaGATAGACAGTCTTTGTCGG +
Preference number: 3 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTLKLDQ*IDSLCR
Trigger: CCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512465.5
3UTR GCA 72 bp GTGGATGTTTCCAGAGTTAGGAACAGACTCTGTTGCTaGCTGGAAATTTCTAGTGAGCATGTCCAACTTGGG +
Preference number: 3 (lower is better)
Translates to: VDVSRVRNRLCC*LEISSEHVQLG
Trigger: CCCAAGTTGGACATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR CCA 72 bp TTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTaGCTACAAGTCAGGGGGATCAAACACAAACAGCGC +
Preference number: 3 (lower is better)
Translates to: LTFSFCKGSYTS*LQVRGIKHKQR
Trigger: GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CCA 72 bp CTATTTATAAACTGCAACAAATCCTCCACCCTCCGATaGTCAACGACGCTTTCCCTTTCTGAGATCTGGTCC +
Preference number: 3 (lower is better)
Translates to: LFINCNKSSTLR*STTLSLSEIWS
Trigger: GGACCAGATCTCAGAAAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR CCA 72 bp ATGTTTCCAGAGTTAGGAACAGACTCTGTTGCTGCCTaGAAATTTCTAGTGAGCATGTCCAACTTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: MFPELGTDSVAA*KFLVSMSNLGQ
Trigger: CTGCCCCAAGTTGGACATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CAA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCTCTTGTTCTTGCCCTTaGGCTGAGGGGACTCTGCCA +
Preference number: 3 (lower is better)
Translates to: SSISTLSRSISLGRKTSSSCSCP*AEGTLP
Trigger: TGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAGA...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513898.5
3UTR-3UTR CAA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGCTAAAATTGGACCAGTaGATAGACAGTCTTTGTCGG +
Preference number: 3 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMLKLDQ*IDSLCR
Trigger: CCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR-3UTR CAA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTATGGGGCAGTCTTTACTaGGCCTCTCCTTCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLWGSLY*ASPSSS
Trigger: AGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCCA...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR GCA 72 bp ATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTGTTaGTGCCTGGAAATTTCTAGTGAGCATGTCCAACTT +
Preference number: 3 (lower is better)
Translates to: IVDVSRVRNRLC*CLEISSEHVQL
Trigger: AAGTTGGACATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACATCCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
3UTR TCA 72 bp AATACAGTCGTACACTCTATAACAGACTTGATGGTGTaGGTACTGGGTGGGCTTGTTTTTAACTTTCTCGTT +
Preference number: 3 (lower is better)
Translates to: NTVVHSITDLMV*VLGGLVFNFLV
Trigger: AACGAGAAAGTTAAAAACAAGCCCACCCAGTACTCACACCATCAAGTCTGTTATAGAGTGTACGACTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCAGCCCGCCTAGGGTaGGACGCAGGGGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: QRGAWLLGWCSLACLSRVPARLG*DAGAQE
Trigger: CTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGG...GACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCGCCGCAGCCGACAGCTaGCGGAGCAGGCGGACCTTC +
Preference number: 4 (lower is better)
Translates to: GAWLLGWCSLACLSRVPLAAADS*RSRRTF
Trigger: GAAGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGC...GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCATGGAGCGTGCGGCCTaGCAGAGGGCGCCGTACTCC +
Preference number: 4 (lower is better)
Translates to: ARGVALGVVQPGLPLACPMERAA*QRAPYS
Trigger: GGAGTACGGCGCCCTCTGCCAGGCCGCACGCTCCAT...GGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCGGGGCACAGGAGAGCTaGGTGACGGCCGATACCCCG +
Preference number: 4 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGGAQES*VTADTP
Trigger: CGGGGTATCGGCCGTCACTCAGCTCTCCTGTGCCCC...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTTCCTCCCGCCGCCTCTaGTCCTCCTGGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PARGVALGVVQPGLPLACSSRRL*SSWRCR
Trigger: CCTGCACCTCCAGGAGGAGCAGAGGCGGCGGGAGGA...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCCGCCTCTGCTCCTCCTaGAGGTGCAGGTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSRLCSS*RCRCSR
Trigger: CCGGGAGCACCTGCACCTCCAGGAGGAGCAGAGGCG...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGCCTCTGCTCCTCCTaGAGGTGCAGGTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGRLCSS*RCRCSR
Trigger: CCGGGAGCACCTGCACCTCCAGGAGGAGCAGAGGCG...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCCCCGGTGAGGACACATaGCAGGACAGGGCGCAATGC +
Preference number: 4 (lower is better)
Translates to: ARGVALGVVQPGLPLACPPGEDT*QDRAQC
Trigger: GCATTGCGCCCTGTCCTGTCATGTGTCCTCACCGGG...GGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCAGGAGGGAGATGAACTaGTGCGCTTGCGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGRREMN*CACGGP
Trigger: GGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCT...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTTGTGGGCCTCCTCGCTaGCTCGCTGCTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PARGVALGVVQPGLPLACCGPPR*LAAGLA
Trigger: AGCAAGGCCAGCAGCGAGCCAGCGAGGAGGCCCACA...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCAAGCAGGAGGGAGATaGACTGGTGCGCTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGQAGGR*TGALAA
Trigger: CGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTG...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTGACCACCTTAGCCTTTaGCTCAGTCTGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PARGVALGVVQPGLPLACDHLSL*LSLGPG
Trigger: CCCCGGGCCCAGACTGAGTCAAAGGCTAAGGTGGTC...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCTGCAGGCCAGATGGTaGCTTCACCTTGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QRGAWLLGWCSLACLSRVLQARW*LHLGRS
Trigger: GCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAG...GACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCGCAGTCAGGGTCACTaGAGACACTTGGAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PARGVALGVVQPGLPLACRSQGH*RHLEGR
Trigger: GCGCCCCTCCAAGTGTCTGCAGTGACCCTGACTGCG...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCCAGGACAGGGCGCAATaGAGAGGCAACGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSQDRAQ*RGNGAT
Trigger: CGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTG...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCATGGTGCCTTCACCTTaGCCGCAGCCGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QRGAWLLGWCSLACLSRVMVPSP*PQPTAA
Trigger: GGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCAT...GACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCTCGCTGGCTCGCTGCTaGCCTTGCTGGTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSSLARC*PCWSAS
Trigger: TGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGA...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGCCTCCGAGGCCGCGGTaGTGGGAGGACTTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVPPRPR*WEDLAG
Trigger: TCCCGCCAAGTCCTCCCACCACCGCGGCCTCGGAGG...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CAA 72 bp TCTGGGGTTTCAGGCAGCACCAGCTCCGCACAGCCCTaGGCAAGCACCACGGCTCTGGGGCGCCAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: SGVSGSTSSAQP*ASTTALGRQRG
Trigger: CCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTGCCAAGGGCTGTGCGGAGCTGGTGCTGCCTGAAACCCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCCCTGGCCTGGGCTCTaGGTGGTTCATATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGPWPGL*VVHMPG
Trigger: TCCAGGCATATGAACCACTCAGAGCCCAGGCCAGGG...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCTTCTTGCCCTTTGGCTaGGGGGACTCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: QRGAWLLGWCSLACLSRVFLPFG*GDSAST
Trigger: GGTGCTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAA...GACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCTGGGGCAGTCGGGCATaGTCAGCCGGGACGATAACA +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSWGSRA*SAGTIT
Trigger: TGTTATCGTCCCGGCTGAGCATGCCCGACTGCCCCA...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCTGGGGCAGTCGGGCATaGTCAGCCGGGACGATAACA +
Preference number: 4 (lower is better)
Translates to: GAWLLGWCSLACLSRVPLWGSRA*SAGTIT
Trigger: TGTTATCGTCCCGGCTGAGCATGCCCGACTGCCCCA...GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCTGGTGGAGGTCGAGGTaGTGGAGCTGTGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGWWRSR*WSCAQS
Trigger: GCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCA...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACTCCTCCCGCCGCCTCTaGTCCTCCTGGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYSSRRL*SSWRCR
Trigger: CCTGCACCTCCAGGAGGAGCAGAGGCGGCGGGAGGA...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACATGGAGCGTGCGGCCTaGCAGAGGGCGCCGTACTCC +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYMERAA*QRAPYS
Trigger: GGAGTACGGCGCCCTCTGCCAGGCCGCACGCTCCAT...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCACTTGTTGGTGCAGCTaGAGGCCCGCCGTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSTCWCS*RPAVPK
Trigger: TTTGGGCACGGCGGGCCTCCAGCTGCACCAACAAGT...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACGAGGGGCGTGGCTCTTaGGGTGGTGCAGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYEGRGS*GGAAWP
Trigger: AGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTC...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGGGTGCTGATGGAGCGTaGGGCCTGGCAGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQGADGA*GLAEGA
Trigger: GGCGCCCTCTGCCAGGCCGCACGCTCCATCAGCACC...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCCCAGTGCGGGCAAGTTaGTCTGAAGAAGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSPVRAS*SEEVAP
Trigger: CGGAGCCACTTCTTCAGAGCAACTTGCCCGCACTGG...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCTCGCTGCACGCGTGCTaGTCACTGGTTTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: GAWLLGWCSLACLSRVPLSLHAC*SLVWFR
Trigger: CCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGA...GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGGCCCGGGGCTTGGACTaGCCCTCTGTGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGARGLD*PSVALG
Trigger: CCCCAAGGCCACAGAGGGGCAGTCCAAGCCCCGGGC...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCCTGCCAGCACCAGCTTaGTGTTCTGCTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: ARGVALGVVQPGLPLACPLPAPA*CSADAH
Trigger: GTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAG...GGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCTGGCTGAGGGGACTCTaGCAGCACCAGCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QRGAWLLGWCSLACLSRVWLRGL*QHQLAV
Trigger: AACAGCAAGCTGGTGCTGGCAGAGTCCCCTCAGCCA...GACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCTCAGGCACCAGAGACTaGTCCTGGTCATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GAWLLGWCSLACLSRVPLSGTRD*SWSSAS
Trigger: GCTGGCAGATGACCAGGACCAGTCTCTGGTGCCTGA...GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCGTGGATGAGAGGGCGTaGCAGGTGTGGAACAGTGTG +
Preference number: 4 (lower is better)
Translates to: GAWLLGWCSLACLSRVPLVDERA*QVWNSV
Trigger: CACACTGTTCCACACCTGCCACGCCCTCTCATCCAC...GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGATTCCTCGGGGCGGCTaGGGCCGAGTGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVIPRGG*GRVSVV
Trigger: GACCACAGACACTCGGCCCCAGCCGCCCCGAGGAAT...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCCTAGCCCTGGCCTaGGCTCTGAGTGGTTCATAT +
Preference number: 4 (lower is better)
Translates to: PARGVALGVVQPGLPLACPLALA*ALSGSY
Trigger: ATATGAACCACTCAGAGCCCAGGCCAGGGCTAGGGG...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGCAAGCACCACGGCTCTaGGGCGCCAGCGAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQQAPRL*GASEGR
Trigger: ACGCCCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTG...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCACGAGCTAACGGCGTaGGCCGAGCATCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: GAWLLGWCSLACLSRVPLHELTA*AEHQLL
Trigger: GAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG...GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCGGTGGTGGGAGGACTTaGCGGGAACTACTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: ARGVALGVVQPGLPLACPGGGRT*RELLFQ
Trigger: TTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACC...GGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CAA 72 bp CGGCCCAGGCCTCCGAGGCCGCGGTGGTGGGAGGACTaGGCGGGAACTACTGTTCCAATCCGACAGCACAGA +
Preference number: 4 (lower is better)
Translates to: RPRPPRPRWWED*AGTTVPIRQHR
Trigger: TCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGGAGGCCTGGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCGCGGGCAAGTTGCTCTaGAGAAGTGGCTCCGAAAAG +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSAGKLL*RSGSEK
Trigger: CTTTTCGGAGCCACTTCTTCAGAGCAACTTGCCCGC...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGCGGCCGATACCCCGGTaGGGACACATGACAGGACAG +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVRPIPR*GHMTGQ
Trigger: CTGTCCTGTCATGTGTCCTCACCGGGGTATCGGCCG...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGACCAGCCCGCCTAGGGTaGGACGCAGGGGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGPARLG*DAGAQE
Trigger: CTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGG...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTCCAGCCCGCCTAGGGTaGGACGCAGGGGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVPARLG*DAGAQE
Trigger: CTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGG...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACCTGCCTGGCGGTAGATaGAGCGCACCGTGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYLPGGR*SAPCSA
Trigger: TGCGCTACACGGTGCGCTGCATCTACCGCCAGGCAG...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCATCTTCTCCTGTAGTTaGAGTTGGGGCAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: ARGVALGVVQPGLPLACPIFSCS*SWGSRA
Trigger: TGCCCGACTGCCCCAACTGCAACTACAGGAGAAGAT...GGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCTTCAGCCTGCTGTGTTaGGTAGGATGGGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: QRGAWLLGWCSLACLSRVFSLLC*VGWGWT
Trigger: AGTCCACCCCCATCCTACCCAACACAGCAGGCTGAA...GACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCTCCTCCACCCTCCGATaGTCAACGACGCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSSSTLR*STTLSL
Trigger: AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGA...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCTCCTCCACCCTCCGATaGTCAACGACGCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGSSTLR*STTLSL
Trigger: AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGA...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGGAGGGGCGTGGCTCTTaGGGTGGTGCAGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQEGRGS*GGAAWP
Trigger: AGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTC...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCGCCAGCGAGGGGCGTaGCTCTTGGGGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRRQRGA*LLGWCS
Trigger: GCTGCACCACCCCAAGAGCCACGCCCCTCGCTGGCG...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTATGAACTGGTGCGCTTaGGGCGGGCCCTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GNGATWMMQTPIWPRPRPMNWCA*GGPCRP
Trigger: TGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCAT...AGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTGGTGCTGATGGAGCGTaGGGCCTGGCAGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRAGADGA*GLAEGA
Trigger: GGCGCCCTCTGCCAGGCCGCACGCTCCATCAGCACC...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCCGGGACGATAACATGTaGCTCATGGTGTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: ARGVALGVVQPGLPLACPRDDNM*LMVSVK
Trigger: CTTCACAGACACCATGAGGCACATGTTATCGTCCCG...GGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTCCTTCCTGGAGGTGCAGGTaGTCCCGGGCCCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: AGSLLALLVCLSFCLPFPSWRCR*SRALAS
Trigger: AGAGGCCAGGGCCCGGGAGCACCTGCACCTCCAGGA...AGGAAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCTGCTCCTCCTGGAGGTaGAGGTGCTCCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPCSSWR*RCSRAL
Trigger: CAGGGCCCGGGAGCACCTGCACCTCCAGGAGGAGCA...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGTGGTGCAGCCTGGCCTaGCTCTCGCGTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQWCSLA*LSRVPL
Trigger: GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCA...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGTGGCTCTTGGGGTGGTaGAGCCTGGCCTGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPWLLGW*SLACLS
Trigger: CGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCA...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTATGGAGCGTGCGGCCTaGCAGAGGGCGCCGTACTCC +
Preference number: 4 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFMERAA*QRAPYS
Trigger: GGAGTACGGCGCCCTCTGCCAGGCCGCACGCTCCAT...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCCCATCATCCTGCTGTaGGTCGTAGACACCATTCTC +
Preference number: 4 (lower is better)
Translates to: GAWLLGWCSLACLSRVPLPIILL*VVDTIL
Trigger: GAGAATGGTGTCTACGACCCACAGCAGGATGATGGG...GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTGCTCCTCTTTCCTCTTaGTCAGCCGTAAGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: PARGVALGVVQPGLPLACAPLSS*SAVSEA
Trigger: AGCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGC...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAAACGATCCTCCTCTTCTTCCTCATCCTCCTCCTCCTCCCGCCGCCTCTGCTCCGCCTCTGCTCCTCCTaGAGGTGCAGGTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ETILLFFLILLLLPPPLLRLCSS*RCRCSR
Trigger: CCGGGAGCACCTGCACCTCCAGGAGGAGCAGAGGCG...GAGCAGAGGCGGCGGGAGGAGGAGGAGGATGAGGAAGAAGAGGAGGATCGTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCATCTGGGCCCGGGGCTTaGACTGCCCCTCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: HELTAWAEHQLLGLGFQASGPGA*TAPLWP
Trigger: AGGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGA...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCATGGGGTGGTGCAGCCTaGCCTGCCTCTCGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: HELTAWAEHQLLGLGFQAWGGAA*PASRVS
Trigger: GGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCA...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTGCGTGGCTCTTGGGGTaGTGCAGCCTGGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVAWLLG*CSLACL
Trigger: GAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGC...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCGGAGACAGTAGATTGTaGAGAACAAAGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ARGVALGVVQPGLPLACPGDSRL*RTKEAC
Trigger: GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCC...GGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGGCACGCTGTTGCCCTTaGGAGCCATGGAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVARCCP*EPWKGP
Trigger: TGGCCCTTTCCATGGCTCCCAAGGGCAACAGCGTGC...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR CCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCCTGCCGGCCTCTGGCTaGGAGCCACCAAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPLPASG*EPPSEE
Trigger: CTCCTCGCTTGGTGGCTCCCAGCCAGAGGCCGGCAG...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR TCA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGCAAGCAGGAGGGAGATaGACTGGTGCGCTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPQAGGR*TGALAA
Trigger: CGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTG...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGCAAGCAGGAGGGAGATaGACTGGTGCGCTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGQAGGR*TGALAA
Trigger: CGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTG...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTCCCCGAGCTTGCAGATaGCACACTGGGCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVPRACR*HTGRAP
Trigger: AGGAGCCCGCCCAGTGTGTCATCTGCAAGCTCGGGG...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGAGCCTGGGGTGCTGCTaGATTGTGATGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVSLGCC*IVMGEL
Trigger: CAGCTCTCCCATCACAATTCAGCAGCACCCCAGGCT...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGGACCACCTTAGCCTTTaGCTCAGTCTGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQDHLSL*LSLGPG
Trigger: CCCCGGGCCCAGACTGAGTCAAAGGCTAAGGTGGTC...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGAGCTTGCTGTTCTGCTaGTGCTCACCGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVSLLFC*CSPGEV
Trigger: CACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCT...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCGGCCGATACCCCGGTaGGGACACATGACAGGACAG +
Preference number: 4 (lower is better)
Translates to: GNGATWMMQTPIWPRPRPRPIPR*GHMTGQ
Trigger: CTGTCCTGTCATGTGTCCTCACCGGGGTATCGGCCG...AGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCTTCCCGGTCCGCCTCTaGCGAAATTTCTTCATATGG +
Preference number: 4 (lower is better)
Translates to: QRGAWLLGWCSLACLSRVFPVRL*RNFFIW
Trigger: CCATATGAAGAAATTTCGGCAGAGGCGGACCGGGAA...GACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
CDS-3UTR GCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGCTGCCTGGCGGTAGATaGAGCGCACCGTGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQLPGGR*SAPCSA
Trigger: TGCGCTACACGGTGCGCTGCATCTACCGCCAGGCAG...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCACATACTCTCGAGCTTaGTGTTCCAGACGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSTYSRA*CSRRWY
Trigger: GTACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGT...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCATGAACTGGTGCGCTTaGGGCGGGCCCTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPMNWCA*GGPCRP
Trigger: TGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCAT...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGGAGATGAACTGGTaGGCTTGCGGCGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPREMNW*ACGGPC
Trigger: GCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCT...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTAGGGAGATGAACTGGTaGGCTTGCGGCGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFREMNW*ACGGPC
Trigger: GCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCT...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCAGGTGTGGAACAGTGTaGAAAGGCACATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSRCGTV*KGTCPW
Trigger: CCATGGACATGTGCCTTTGCACACTGTTCCACACCT...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTTGCTCCTCCTGGAGGTaGAGGTGCTCCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LLQLPLLMPCSLRCTRAACSSWR*RCSRAL
Trigger: CAGGGCCCGGGAGCACCTGCACCTCCAGGAGGAGCA...AGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATCCTCGCTGGCTCGCTaGTGGCCTTGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGSSLAR*WPCWSA
Trigger: GGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGA...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGAGGAGAAATTTGGAGTCTCTGGTGTCGACGGGGTCTGCAGCATCCCCATCAGCCCGGGGCTTGGACTaGCCCTCTGTGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GRRNLESLVSTGSAASPSARGLD*PSVALG
Trigger: CCCCAAGGCCACAGAGGGGCAGTCCAAGCCCCGGGC...TGATGGGGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATTTCTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCATGGCTCTTGGGGTGGTaGAGCCTGGCCTGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: HELTAWAEHQLLGLGFQAWLLGW*SLACLS
Trigger: CGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCA...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGAAGGAGGGAGATGAACTaGTGCGCTTGCGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGRREMN*CACGGP
Trigger: GGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCT...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCACGCGTGCTGCTCACTaGTTTGGTTTCGGAGCTATT +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSTRAAH*FGFGAI
Trigger: AATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTGGTGCTCCCGGGCCCTaGCCTCTGCTTCTAGGCGAG +
Preference number: 4 (lower is better)
Translates to: MPCSLRCTRAAHWFGFGAGAPGP*PLLLGE
Trigger: CTCGCCTAGAAGCAGAGGCCAGGGCCCGGGAGCACC...AGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTCCTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCACGCTGCTGGCCTTGCTaGTCTGCCTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLAGSLLALLVCLSFCLPRCWPC*SASASA
Trigger: AGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCG...TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCGAGGGGCGTGGCTCTTaGGGTGGTGCAGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSEGRGS*GGAAWP
Trigger: AGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTC...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACCACGAGCTAACGGCGTaGGCCGAGCATCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYHELTA*AEHQLL
Trigger: GAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCTCCTTGCTGATGCCATaGAACACGTCACCTACTGAA +
Preference number: 4 (lower is better)
Translates to: GAWLLGWCSLACLSRVPLSLLMP*NTSPTE
Trigger: TTCAGTAGGTGACGTGTTTCATGGCATCAGCAAGGA...GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGCCCTGGCCTGGGCTCTaGGTGGTTCATATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGPWPGL*VVHMPG
Trigger: TCCAGGCATATGAACCACTCAGAGCCCAGGCCAGGG...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCACTGCCTGGCGGTAGATaGAGCGCACCGTGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: HELTAWAEHQLLGLGFQALPGGR*SAPCSA
Trigger: TGCGCTACACGGTGCGCTGCATCTACCGCCAGGCAG...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCCTGCCTGGCGGTAGATaGAGCGCACCGTGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPLPGGR*SAPCSA
Trigger: TGCGCTACACGGTGCGCTGCATCTACCGCCAGGCAG...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGGGGACTCTGCCAGCACCAGCTTGCTGTTCTGCTGATGCTCACCGGGAGAGGTCTGCAGGCCAGATGGTaGCTTCACCTTGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RGLCQHQLAVLLMLTGRGLQARW*LHLGRS
Trigger: GCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAG...ACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTATGAACTGGTGCGCTTaGGGCGGGCCCTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLQLPLLMPCSLRCTRAAMNWCA*GGPCRP
Trigger: TGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCAT...AGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGACTCCTCGGCGACTCTaGGCAGCTCCTCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRTPRRL*AAPPRN
Trigger: GTTCCGAGGAGGAGCTGCGCAGAGTCGCCGAGGAGT...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGGGCTCCGGCTGTCATTaGAGATGGTGTCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVGSGCH*RWCQSR
Trigger: TCTGGACTGACACCATCTGCAATGACAGCCGGAGCC...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACAGGGTAAAGGTGCAGTaGAGGGTGTGTGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYRVKVQ*RVCGLL
Trigger: GAGAAGCCCACACACCCTGCACTGCACCTTTACCCT...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGTGGCTGTTGCTGGACTaGACTGTGGTAGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVWLLLD*TVVAVQ
Trigger: CTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCA...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGCCATTCTCGCAGCGGTaGCCTTCGCAGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPPFSQR*PSQSGS
Trigger: TGACCCTGACTGCGAAGGGCACCGCTGCGAGAATGG...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGGGGACTCTGCCAGCACCAGCTTGCTGTTCTGCTGATGCTCACCGGGAGAGGTCCTTGCTCGCTTCGCTaGACGCGTGCTGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: RGLCQHQLAVLLMLTGRGPCSLR*TRAAHW
Trigger: CCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGG...ACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGCCTTTGCTTATGCCTTaGTCGCTTCGCTGCACGCGT +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVPLLMP*SLRCTR
Trigger: ACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGG...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCGGTGTCGACGGGGTCTaGAGCATCCCCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSGVDGV*SIPISP
Trigger: GGGGCTGATGGGGATGCTGCAGACCCCGTCGACACC...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCCTCTCCTCTCTTTTCTaGTCTGTGATGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSLSSLF*SVMDMR
Trigger: CCTCATGTCCATCACAGAGCAGAAAAGAGAGGAGAG...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTTGGCTCTTGGGGTGGTaGAGCCTGGCCTGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRAWLLGW*SLACLS
Trigger: CGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCA...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCGCCCTGCAGGCCAGATaGTGCCTTCACCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSALQAR*CLHLGR
Trigger: GCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGC...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCGGATTCCATTCATGTTaGCCACCACCTCGGTATCAT +
Preference number: 4 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGGFHSC*PPPRYH
Trigger: ATGATACCGAGGTGGTGGCCAACATGAATGGAATCC...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTGGATTCCATTCATGTTaGCCACCACCTCGGTATCAT +
Preference number: 4 (lower is better)
Translates to: PARGVALGVVQPGLPLACGFHSC*PPPRYH
Trigger: ATGATACCGAGGTGGTGGCCAACATGAATGGAATCC...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCTGAGGAACTACTGCTaGTACTGCTTATCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGLRNYC*YCLSEE
Trigger: CTCCTCAGATAAGCAGTACCAGCAGTAGTTCCTCAG...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACTACTTGCCCTCCTTCTaGTTGGTGGAGGTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYYLPSF*LVEVEV
Trigger: CACCTCGACCTCCACCAACCAGAAGGAGGGCAAGTA...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CCA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTGTTCATATGCCTGGATaGGGAGTGAGAAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: PARGVALGVVQPGLPLACVHMPG*GVRRGF
Trigger: GAAACCTCTTCTCACTCCCCATCCAGGCATATGAAC...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGCGCTGCTGGCCTTGCTaGTCTGCCTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPRCWPC*SASASA
Trigger: AGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCG...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTTGTGGGCCTCCTCGCTaGCTCGCTGCTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: MPCSLRCTRAAHWFGFGACGPPR*LAAGLA
Trigger: AGCAAGGCCAGCAGCGAGCCAGCGAGGAGGCCCACA...AGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTCTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGTGGGGTGGTGCAGCCTaGCCTGCCTCTCGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: FSSSFLCLCLARFAARVLWGGAA*PASRVS
Trigger: GGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCA...CAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR CCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCCAAGCACCACGGCTCTaGGGCGCCAGCGAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGQAPRL*GASEGR
Trigger: ACGCCCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTG...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACACACGTGAGGATGTGTaGGAGACTGCAGTCATCGCA +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYTREDV*ETAVIA
Trigger: TGCGATGACTGCAGTCTCTCACACATCCTCACGTGT...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTGGTGCTGCTGAATTGTaGTGGGAGAGCTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVGAAEL*WESWSR
Trigger: CCGGCTCCAGCTCTCCCATCACAATTCAGCAGCACC...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCATCAGCAAATTTGGCTaGCAATGGTGCAACATCTTC +
Preference number: 4 (lower is better)
Translates to: ARGVALGVVQPGLPLACPISKFG*QWCNIF
Trigger: GAAGATGTTGCACCATTGTCAGCCAAATTTGCTGAT...GGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCTGATGACGTGGCCATaGCAACTTTATTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GAWLLGWCSLACLSRVPLLMTWP*QLYLLP
Trigger: TGGAAGCAAATAAAGTTGTCATGGCCACGTCATCAG...GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGTGTGGTCCTCCTTGCTaGTGCCATGAAACACGTCAC +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVCGPPC*CHETRH
Trigger: GTGACGTGTTTCATGGCATCAGCAAGGAGGACCACA...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CTCCTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCAGCAAGATTTGCAAGGTaGGGTGTGGAGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLAGSLLALLVCLSFCLPARFAR*GVEAGE
Trigger: CTCACCTGCCTCCACACCTCACCTTGCAAATCTTGC...TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCGCTGAAATTCCTCCTTaGAACGATCCTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGAEIPP*NDPPLL
Trigger: AAGAAGAGGAGGATCGTTTCAAGGAGGAATTTCAGC...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCCCCTGGCCTGGGCTCTaGGTGGTTCATATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPPWPGL*VVHMPG
Trigger: TCCAGGCATATGAACCACTCAGAGCCCAGGCCAGGG...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGGGGGCACAGGAGAGCTaGGTGACGGCCGATACCCCG +
Preference number: 4 (lower is better)
Translates to: SYNRRSLTHRLHAHELTAGAQES*VTADTP
Trigger: CGGGGTATCGGCCGTCACTCAGCTCTCCTGTGCCCC...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTACCAGCCCGCCTAGGGTaGGACGCAGGGGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELPARLG*DAGAQE
Trigger: CTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGG...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGGGGACTCTGCCAGCACCAGCTTGCTGTTCTGCTGATGCTCACCGGGAGAGGTTGGGGCAGTCGGGCATaGTCAGCCGGGACGATAACA +
Preference number: 4 (lower is better)
Translates to: RGLCQHQLAVLLMLTGRGWGSRA*SAGTIT
Trigger: TGTTATCGTCCCGGCTGAGCATGCCCGACTGCCCCA...ACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGCTGTCCTGGGGCTCCTaGTTCCCAGCACTCCATCTT +
Preference number: 4 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPLSWGS*FPALHL
Trigger: AAGATGGAGTGCTGGGAAGCAGGAGCCCCAGGACAG...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGGTGGAGGTCGAGGTaGTGGAGCTGTGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGWWRSR*WSCAQS
Trigger: GCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCA...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGTCGCTGCACGCGTGCTaGTCACTGGTTTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQSLHAC*SLVWFR
Trigger: CCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGA...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGAGGAGAAATTTGGAGTCTCTGGTGTCGACGGGGTCTGCAGCATCCCCATCAGGTGTCGACGGGGTCTaGAGCATCCCCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GRRNLESLVSTGSAASPSGVDGV*SIPISP
Trigger: GGGGCTGATGGGGATGCTGCAGACCCCGTCGACACC...TGATGGGGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATTTCTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGACGAGCCTCCCACCACTaGCGGCCTCTGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRRASHH*RPLAGS
Trigger: GCTCCCAGCCAGAGGCCGGCAGTGGTGGGAGGCTCG...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR GCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCTCTGCGCTCACTaGAGGCCTCGCACGAGCATG +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGFLCAH*RPRTSM
Trigger: CATGCTCGTGCGAGGCCTGCAGTGAGCGCAGAGAAA...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR GCA 90 bp GGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTTTCCCGGTCCGCCTCTaGCGAAATTTCTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: GNGATWMMQTPIWPRPRPFPVRL*RNFSAL
Trigger: GAGCGCAGAGAAATTTCGGCAGAGGCGGACCGGGAA...AGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR CCA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGTCAGGCACCAGAGACTaGTCCTGGTCATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPSGTRD*SWSSAS
Trigger: GCTGGCAGATGACCAGGACCAGTCTCTGGTGCCTGA...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTCTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGGCCCTGCAGGCCAGATaGTGCCTTCACCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: FSSSFLCLCLARFAARVLALQAR*CLHLGR
Trigger: GCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGC...CAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTCTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGAGGAGGGAGATGAACTaGTGCGCTTGCGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: FSSSFLCLCLARFAARVLRREMN*CACGGP
Trigger: GGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCT...CAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTGCGTCGATCCTCTTCTaGCACTCCAGCCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVASILF*HSSHSS
Trigger: CGAGGAGTGGCTGGAGTGCCAGAAGAGGATCGACGC...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGCTGTGTTGGGTAGGATaGGGGTGGACTGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVLCWVG*GWTVCF
Trigger: AAAGCAGACAGTCCACCCCCATCCTACCCAACACAG...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGGCAGTGCAGGGTGTGTaGGCTTCTCTGGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPAVQGV*ASLGSR
Trigger: TCTTGAGCCCAGAGAAGCCCACACACCCTGCACTGC...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTGTCACTGCAGACACTTaGAGGGGCGCTAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: GNGATWMMQTPIWPRPRPVTADT*RGANGA
Trigger: GGCTCCATTAGCGCCCCTCCAAGTGTCTGCAGTGAC...AGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAAACGATCCTCCTCTTCTTCCTCATCCTCCTCCTCCTCCCGCCGCCTCTGCTCTGCCCTCCTTCTGGTTaGTGGAGGTCGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ETILLFFLILLLLPPPLLCPPSG*WRSRCW
Trigger: CCAGCACCTCGACCTCCACCAACCAGAAGGAGGGCA...GAGCAGAGGCGGCGGGAGGAGGAGGAGGATGAGGAAGAAGAGGAGGATCGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCACTTGTTGGTGCAGCTaGAGGCCCGCCGTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPTCWCS*RPAVPK
Trigger: TTTGGGCACGGCGGGCCTCCAGCTGCACCAACAAGT...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACGAAATTTGGAGTCTCTaGTGTCGACGGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYEIWSL*CRRGLQ
Trigger: CTGCAGACCCCGTCGACACCAGAGACTCCAAATTTC...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTTCGCTGGCTCGCTGCTaGCCTTGCTGGTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LLQLPLLMPCSLRCTRAASLARC*PCWSAS
Trigger: TGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGA...AGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGTCTGGGCCCGGGGCTTaGACTGCCCCTCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SYNRRSLTHRLHAHELTASGPGA*TAPLWP
Trigger: AGGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGA...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCGCCTTTGACTCAGTCTaGGCCCGGGGCTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSAFDSV*ARGLDC
Trigger: GCAGTCCAAGCCCCGGGCCCAGACTGAGTCAAAGGC...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCTGGGGTGGTGCAGCCTaGCCTGCCTCTCGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGWGGAA*PASRVS
Trigger: GGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCA...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGGAGGGGCGTGGCTCTTaGGGTGGTGCAGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SYNRRSLTHRLHAHELTAEGRGS*GGAAWP
Trigger: AGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTC...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGACGCCAGCGAGGGGCGTaGCTCTTGGGGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRRQRGA*LLGWCS
Trigger: GCTGCACCACCCCAAGAGCCACGCCCCTCGCTGGCG...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCAAGCACCACGGCTCTaGGGCGCCAGCGAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNQAPRL*GASEGR
Trigger: ACGCCCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTG...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCCCTCCGAGGCCGCGGTaGTGGGAGGACTTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SATCTLGDSRLWRTKEACPPRPR*WEDLAG
Trigger: TCCCGCCAAGTCCTCCCACCACCGCGGCCTCGGAGG...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGAAGCCTGGGGTGCTGCTaGATTGTGATGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGSLGCC*IVMGEL
Trigger: CAGCTCTCCCATCACAATTCAGCAGCACCCCAGGCT...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCATCAGCAAATTTGGCTaGCAATGGTGCAACATCTTC +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSISKFG*QWCNIF
Trigger: GAAGATGTTGCACCATTGTCAGCCAAATTTGCTGAT...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGCTGGTACTGCTTATCTaGGGAGACTCATCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVLVLLI*GDSSFR
Trigger: CCTGAAGGATGAGTCTCCTCAGATAAGCAGTACCAG...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACTCTTGGATGACACTCTaGACTGGCTGTTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYSWMTL*TGCCWT
Trigger: AGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGA...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGGCAAGATTTGCAAGGTaGGGTGTGGAGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQARFAR*GVEAGE
Trigger: CTCACCTGCCTCCACACCTCACCTTGCAAATCTTGC...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TTCTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGGACCACCTTAGCCTTTaGCTCAGTCTGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FSSSFLCLCLARFAARVLDHLSL*LSLGPG
Trigger: CCCCGGGCCCAGACTGAGTCAAAGGCTAAGGTGGTC...CAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GAAACGATCCTCCTCTTCTTCCTCATCCTCCTCCTCCTCCCGCCGCCTCTGCTCAGCTTGCTGTTCTGCTaGTGCTCACCGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ETILLFFLILLLLPPPLLSLLFC*CSPGEV
Trigger: CACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCT...GAGCAGAGGCGGCGGGAGGAGGAGGAGGATGAGGAAGAAGAGGAGGATCGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTTCTTGCCCTTTGGCTaGGGGGACTCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSFLPFG*GDSAST
Trigger: GGTGCTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAA...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGACGGAGCCACGTGGATaGTGCAAACTCCTATCTGGC +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGTEPRG*CKLLSG
Trigger: GCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGT...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATGGGGCACAGGAGAGCTaGGTGACGGCCGATACCCCG +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNGAQES*VTADTP
Trigger: CGGGGTATCGGCCGTCACTCAGCTCTCCTGTGCCCC...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCCTGGCCTGCCTCTCGCGTGTCCCTCTCCAGGGAGTCCTCATTCAGTGGGCAGACATACTCTCGAGCTTaGTGTTCCAGACGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: AWPASRVSLSRESSFSGQTYSRA*CSRRWY
Trigger: GTACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGT...CTGCCCACTGAATGAGGACTCCCTGGAGAGGGACACGCGAGAGGCAGGCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR GCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGGCCGCAGCCGACAGCTaGCGGAGCAGGCGGACCTTC +
Preference number: 4 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQAAADS*RSRRTF
Trigger: GAAGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGC...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGTGCTGATGGAGCGTaGGGCCTGGCAGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: EDLAGTTVPIRQHRATIEGADGA*GLAEGA
Trigger: GGCGCCCTCTGCCAGGCCGCACGCTCCATCAGCACC...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCAGTGCGGGCAAGTTaGTCTGAAGAAGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRPVRAS*SEEVAP
Trigger: CGGAGCCACTTCTTCAGAGCAACTTGCCCGCACTGG...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTCCTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCAATCTTCTCCTGTAGTTaGAGTTGGGGCAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: LLAGSLLALLVCLSFCLPIFSCS*SWGSRA
Trigger: TGCCCGACTGCCCCAACTGCAACTACAGGAGAAGAT...TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACGGATGTGTGAGAGACTaGAGTCATCGCAAGCACATC +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYGCVRD*SHRKHI
Trigger: GATGTGCTTGCGATGACTGCAGTCTCTCACACATCC...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCCTGTCCTGGGGCTCCTaGTTCCCAGCACTCCATCTT +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPLSWGS*FPALHL
Trigger: AAGATGGAGTGCTGGGAAGCAGGAGCCCCAGGACAG...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGGGTAAAGGTGCAGTaGAGGGTGTGTGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQRVKVQ*RVCGLL
Trigger: GAGAAGCCCACACACCCTGCACTGCACCTTTACCCT...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTTTACTATCCGAGACTaGAGGTGTTTCATTGCTAGA +
Preference number: 4 (lower is better)
Translates to: ARGVALGVVQPGLPLACPFTIRD*RCFIAR
Trigger: TCTAGCAATGAAACACCTGCAGTCTCGGATAGTAAA...GGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGGCAGCTGTCCTCATCTaGACTCTCGTCCCCATCATC +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGAAVLI*TLVPII
Trigger: GATGATGGGGACGAGAGTGCAGATGAGGACAGCTGC...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCTTTGCTTATGCCTTaGTCGCTTCGCTGCACGCGT +
Preference number: 4 (lower is better)
Translates to: GNGATWMMQTPIWPRPRPPLLMP*SLRCTR
Trigger: ACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGG...AGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGTGCTCCTCCTGGAGGTaGAGGTGCTCCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LATSQGDQTQTAQRVHSECSSWR*RCSRAL
Trigger: CAGGGCCCGGGAGCACCTGCACCTCCAGGAGGAGCA...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGGTGTCGACGGGGTCTaGAGCATCCCCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGGVDGV*SIPISP
Trigger: GGGGCTGATGGGGATGCTGCAGACCCCGTCGACACC...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCACTGGCCTTGCTGGTCTaGCTCAGCTTCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: HELTAWAEHQLLGLGFQALALLV*LSFCLP
Trigger: TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAG...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCTCCTCGCTGGCTCGCTaGTGGCCTTGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGSSLAR*WPCWSA
Trigger: GGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGA...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGCCCGGGGCTTGGACTaGCCCTCTGTGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETARGLD*PSVALG
Trigger: CCCCAAGGCCACAGAGGGGCAGTCCAAGCCCCGGGC...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCCCGGGGCTTGGACTaGCCCTCTGTGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHARGLD*PSVALG
Trigger: CCCCAAGGCCACAGAGGGGCAGTCCAAGCCCCGGGC...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGCTGCCAGCACCAGCTTaGTGTTCTGCTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGLPAPA*CSADAH
Trigger: GTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAG...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCTATTTTTCTTGTTCTTaGCCTTTGGCTGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: GAWLLGWCSLACLSRVPLYFSCS*PLAEGT
Trigger: AGTCCCCTCAGCCAAAGGGCAAGAACAAGAAAAATA...GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGTGGTGCAGCCTGGCCTaGCTCTCGCGTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SYNRRSLTHRLHAHELTAWCSLA*LSRVPL
Trigger: GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCA...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTGCGTCGATCCTCTTCTaGCACTCCAGCCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: MPCSLRCTRAAHWFGFGAASILF*HSSHSS
Trigger: CGAGGAGTGGCTGGAGTGCCAGAAGAGGATCGACGC...AGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGTTCAGCCTGCTGTGTTaGGTAGGATGGGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPFSLLC*VGWGWT
Trigger: AGTCCACCCCCATCCTACCCAACACAGCAGGCTGAA...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCTTGCAAGGTGAGGTGTaGAGGCAGGTGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPLQGEV*RQVRAQ
Trigger: CTGCGCTCTCACCTGCCTCCACACCTCACCTTGCAA...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGAGTCACTGCAGACACTTaGAGGGGCGCTAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGVTADT*RGANGA
Trigger: GGCTCCATTAGCGCCCCTCCAAGTGTCTGCAGTGAC...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCCCTAGCCCTGGCCTaGGCTCTGAGTGGTTCATAT +
Preference number: 4 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRPLALA*ALSGSY
Trigger: ATATGAACCACTCAGAGCCCAGGCCAGGGCTAGGGG...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGCTTGTTCTTGCCCTTTaGCTGAGGGGACTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPLVLAL*LRGLCQ
Trigger: CTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAG...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTCACGAGCTAACGGCGTaGGCCGAGCATCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVHELTA*AEHQLL
Trigger: GAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCCCTCCGAGGCCGCGGTaGTGGGAGGACTTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRPPRPR*WEDLAG
Trigger: TCCCGCCAAGTCCTCCCACCACCGCGGCCTCGGAGG...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGACTTGTTGGTGCAGCTaGAGGCCTCCTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGTCWCS*RPPSGW
Trigger: CCAACCAGAAGGAGGCCTCCAGCTGCACCAACAAGT...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR CCA 90 bp CTCCTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCAATGATCTCGGCTCACTaGAACCTCCATCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLAGSLLALLVCLSFCLPMISAH*NLHLPG
Trigger: GCCTGGAAGATGGAGGTTCCAGTGAGCCGAGATCAT...TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAATGCGGGGCAGGCCGCTaGGCGGGAGGAACCGCGAGT +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQCGAGR*AGGTAS
Trigger: ACTCGCGGTTCCTCCCGCCCAGCGGCCTGCCCCGCA...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR TCA 90 bp GCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTCCTGCGGGCAAGTTGCTCTaGAGAAGTGGCTCCGAAAAG +
Preference number: 4 (lower is better)
Translates to: AGSLLALLVCLSFCLPFPAGKLL*RSGSEK
Trigger: CTTTTCGGAGCCACTTCTTCAGAGCAACTTGCCCGC...AGGAAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGCCCCGAGCTTGCAGATaGCACACTGGGCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRPRACR*HTGRAP
Trigger: AGGAGCCCGCCCAGTGTGTCATCTGCAAGCTCGGGG...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCGCAAGATTTGCAAGGTaGGGTGTGGAGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPARFAR*GVEAGE
Trigger: CTCACCTGCCTCCACACCTCACCTTGCAAATCTTGC...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGTGCCTGGATGGGGAGTaGGAAGAGGTTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPCLDGE*EEVSGS
Trigger: AGAACCAGAAACCTCTTCTCACTCCCCATCCAGGCA...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGGGCACAGGAGAGCTaGGTGACGGCCGATACCCCG +
Preference number: 4 (lower is better)
Translates to: EDLAGTTVPIRQHRATIEGAQES*VTADTP
Trigger: CGGGGTATCGGCCGTCACTCAGCTCTCCTGTGCCCC...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGGCCGCAGCCGACAGCTaGCGGAGCAGGCGGACCTTC +
Preference number: 4 (lower is better)
Translates to: LRCTRAAHWFGFGAIYKLAAADS*RSRRTF
Trigger: GAAGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGC...CAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACGCCGCAGCCGACAGCTaGCGGAGCAGGCGGACCTTC +
Preference number: 4 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHAAADS*RSRRTF
Trigger: GAAGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGC...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCTTGCGGCGGGCCCTaGAGGCCAGATGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHACGGP*RPDGAF
Trigger: GAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGC...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGAGCTTGCGGCGGGCCCTaGAGGCCAGATGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRACGGP*RPDGAF
Trigger: GAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGC...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCATGAACTGGTGCGCTTaGGGCGGGCCCTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SATCTLGDSRLWRTKEACMNWCA*GGPCRP
Trigger: TGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCAT...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGGGAGATGAACTGGTaGGCTTGCGGCGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRREMNW*ACGGPC
Trigger: GCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCT...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAGGTGCTGATGGAGCGTaGGGCCTGGCAGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: RDLTQAGYKSGGSNTNSAGADGA*GLAEGA
Trigger: GGCGCCCTCTGCCAGGCCGCACGCTCCATCAGCACC...TGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCTGGGGGTGGACTGTCTaGTTTGCTCTCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPWGWTV*FALLCP
Trigger: AGGACAGAGGAGAGCAAAGCAGACAGTCCACCCCCA...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTGGCTCCGGCTGTCATTaGAGATGGTGTCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVGSGCH*RWCQSR
Trigger: TCTGGACTGACACCATCTGCAATGACAGCCGGAGCC...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTAGGGTAAAGGTGCAGTaGAGGGTGTGTGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFRVKVQ*RVCGLL
Trigger: GAGAAGCCCACACACCCTGCACTGCACCTTTACCCT...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTTTTACTATCCGAGACTaGAGGTGTTTCATTGCTAGA +
Preference number: 4 (lower is better)
Translates to: PARGVALGVVQPGLPLACFTIRD*RCFIAR
Trigger: TCTAGCAATGAAACACCTGCAGTCTCGGATAGTAAA...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCTGGCTGTTGCTGGACTaGACTGTGGTAGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPWLLLD*TVVAVQ
Trigger: CTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCA...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCGAGCTATTTATAAACTaGAACAAATCCTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSELFIN*NKSSTL
Trigger: GAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTC...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GAAACGATCCTCCTCTTCTTCCTCATCCTCCTCCTCCTCCCGCCGCCTCTGCTCGCTTCGCTGCACGCGTaGTGCTCACTGGTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ETILLFFLILLLLPPPLLASLHA*CSLVWF
Trigger: AAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGC...GAGCAGAGGCGGCGGGAGGAGGAGGAGGATGAGGAAGAAGAGGAGGATCGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACTCCTGGAGGTGCAGGTaGTCCCGGGCCCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHSWRCR*SRALAS
Trigger: AGAGGCCAGGGCCCGGGAGCACCTGCACCTCCAGGA...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCTCCTGGAGGTGCAGGTaGTCCCGGGCCCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRSWRCR*SRALAS
Trigger: AGAGGCCAGGGCCCGGGAGCACCTGCACCTCCAGGA...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCAGCCCGGGGCTTGGACTaGCCCTCTGTGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ELLFQSDSTELQSKESHAARGLD*PSVALG
Trigger: CCCCAAGGCCACAGAGGGGCAGTCCAAGCCCCGGGC...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCTTAACTTTCTCGTTCTaGAAGGGATCTTACACAAGC +
Preference number: 4 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGLTFSF*KGSYTS
Trigger: GCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAA...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCACCAGAGACTGGTCCTaGTCATCTGCCAGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSTRDWS*SSASGV
Trigger: AACCCCGCTGGCAGATGACCAGGACCAGTCTCTGGT...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCGCCCTGCAGGCCAGATaGTGCCTTCACCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SATCTLGDSRLWRTKEACALQAR*CLHLGR
Trigger: GCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGC...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCAGTTCCCACGTCACTTaGAACTTTTTCAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: QRGAWLLGWCSLACLSRVSSHVT*NFFKCS
Trigger: TGAACACTTGAAAAAGTTCCAAGTGACGTGGGAACT...GACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGGTGTGTGGGCTTCTCTaGGCTCAAGAACTGATGGCC +
Preference number: 4 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRVCGLL*AQELMA
Trigger: GGCCATCAGTTCTTGAGCCCAGAGAAGCCCACACAC...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTAGGGCGTGGCAGGTGTaGAACAGTGTGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: MPCSLRCTRAAHWFGFGARAWQV*NSVQRH
Trigger: GTGCCTTTGCACACTGTTCCACACCTGCCACGCCCT...AGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTGTGGATGAGAGGGCGTaGCAGGTGTGGAACAGTGTG +
Preference number: 4 (lower is better)
Translates to: LLQLPLLMPCSLRCTRAAVDERA*QVWNSV
Trigger: CACACTGTTCCACACCTGCCACGCCCTCTCATCCAC...AGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTCCTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCAGATGACACTCTGAACTaGCTGTTGCTGGACTGCACT +
Preference number: 4 (lower is better)
Translates to: LLAGSLLALLVCLSFCLPDDTLN*LLLDCT
Trigger: AGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATC...TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTTTGCAAGGTGAGGTGTaGAGGCAGGTGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LLQLPLLMPCSLRCTRAALQGEV*RQVRAQ
Trigger: CTGCGCTCTCACCTGCCTCCACACCTCACCTTGCAA...AGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGGGTGCTCCCGGGCCCTaGCCTCTGCTTCTAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQGAPGP*PLLLGE
Trigger: CTCGCCTAGAAGCAGAGGCCAGGGCCCGGGAGCACC...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACGTTCATATGCCTGGATaGGGAGTGAGAAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYVHMPG*GVRRGF
Trigger: GAAACCTCTTCTCACTCCCCATCCAGGCATATGAAC...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGTGGGGAGGAGAAATTTaGAGTCTCTGGTGTCGACGG +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQWGGEI*SLWCRR
Trigger: CCGTCGACACCAGAGACTCCAAATTTCTCCTCCCCA...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCTCGCTGGCTCGCTGCTaGCCTTGCTGGTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGSLARC*PCWSAS
Trigger: TGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGA...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTCTGGGCCCGGGGCTTaGACTGCCCCTCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQSGPGA*TAPLWP
Trigger: AGGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGA...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGCGTGGCTCTTGGGGTaGTGCAGCCTGGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETAWLLG*CSLACL
Trigger: GAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGC...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACGCCAGCGAGGGGCGTaGCTCTTGGGGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: ELLFQSDSTELQSKESHARQRGA*LLGWCS
Trigger: GCTGCACCACCCCAAGAGCCACGCCCCTCGCTGGCG...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACACAAGCACCACGGCTCTaGGGCGCCAGCGAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTQAPRL*GASEGR
Trigger: ACGCCCCTCGCTGGCGCCCCAGAGCCGTGGTGCTTG...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCAGGTGGTGGGAGGACTTaGCGGGAACTACTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: HELTAWAEHQLLGLGFQAGGGRT*RELLFQ
Trigger: TTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACC...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTACTTGTTGGTGCAGCTaGAGGCTCATGCACTCACCC +
Preference number: 4 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFTCWCS*RLMHSP
Trigger: GGGTGAGTGCATGAGCCTCCAGCTGCACCAACAAGT...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CCA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACGCTTGGCCCCGCGCTTaGCGTCGGCTGGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHAWPRA*RRLGSW
Trigger: CCATGAGCCCAGCCGACGCCAAGCGCGGGGCCAAGC...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR CCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTGTTCTTCCGGCGCTTaGCCCCGCGCTTGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQCSSGA*PRAWRR
Trigger: CCGACGCCAAGCGCGGGGCCAAGCGCCGGAAGAACA...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR CCA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACCACTGCCGGCCTCTaGCTGGGAGCCACCAAGCGA +
Preference number: 4 (lower is better)
Translates to: LATSQGDQTQTAQRVHSETTAGL*LGATKR
Trigger: TCGCTTGGTGGCTCCCAGCCAGAGGCCGGCAGTGGT...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR TCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCCGTGTAGCGCACTTCTaGCCAGTAGTTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSRVAHF*PVVLQL
Trigger: CAGCTGCAGAACTACTGGTCAGAAGTGCGCTACACG...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTCGTGTAGCGCACTTCTaGCCAGTAGTTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: MPCSLRCTRAAHWFGFGARVAHF*PVVLQL
Trigger: CAGCTGCAGAACTACTGGTCAGAAGTGCGCTACACG...AGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGCTGGTACTGCTTATCTaGGGAGACTCATCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPLVLLI*GDSSFR
Trigger: CCTGAAGGATGAGTCTCCTCAGATAAGCAGTACCAG...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGTTCATCATCAGCTTCTaGGGAACTACTGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVFIISF*GTTAGT
Trigger: AGTACCAGCAGTAGTTCCTCAGAAGCTGATGATGAA...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCTTGAAGAGATGCATTaGATACCTGATGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: QRGAWLLGWCSLACLSRVLEEMH*IPDAYL
Trigger: CAAATAAGCATCAGGTATTCAATGCATCTCTTCAAG...GACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTTGCCTGGATGGGGAGTaGGAAGAGGTTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFCLDGE*EEVSGS
Trigger: AGAACCAGAAACCTCTTCTCACTCCCCATCCAGGCA...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTACCCGGTGAGGACACATaGCAGGACAGGGCGCAATGC +
Preference number: 4 (lower is better)
Translates to: LLASLHACCSLVWFRSYLPGEDT*QDRAQC
Trigger: GCATTGCGCCCTGTCCTGTCATGTGTCCTCACCGGG...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR TCA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTACGGCCGATACCCCGGTaGGGACACATGACAGGACAG +
Preference number: 4 (lower is better)
Translates to: LLASLHACCSLVWFRSYLRPIPR*GHMTGQ
Trigger: CTGTCCTGTCATGTGTCCTCACCGGGGTATCGGCCG...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR TCA 90 bp CTGTCACCCAGGCATGATCTCGGCTCACTGGAACCTCCATCTTCCAGGCTCAAGTCTGTCACCCAGGCATaGTCTCGGCTCACTGGAACC +
Preference number: 4 (lower is better)
Translates to: LSPRHDLGSLEPPSSRLKSVTQA*SRLTGT
Trigger: GGTTCCAGTGAGCCGAGATCATGCCTGGGTGACAGA...CTTGAGCCTGGAAGATGGAGGTTCCAGTGAGCCGAGATCATGCCTGGGTGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR TCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCCGAGCATGCGGTGTCTaGAGGCAGCGTCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: SATCTLGDSRLWRTKEACRACGV*RQRLCT
Trigger: GGTGCACAGACGCTGCCTTCAGACACCGCATGCTCG...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR GCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACTGCCAGCGGGGTTCCTaGCTGGCGGTAGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHCQRGS*LAVDAA
Trigger: CGCTGCATCTACCGCCAGGCAGGAACCCCGCTGGCA...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACTGCCAGCGGGGTTCCTaGCTGGCGGTAGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: TELQSKESHAQTTRTRANCQRGS*LAVDAA
Trigger: CGCTGCATCTACCGCCAGGCAGGAACCCCGCTGGCA...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCTGGTCCTGGTCATCTaGCAGCGGGGTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNLVLVI*QRGSCL
Trigger: CAGGCAGGAACCCCGCTGGCAGATGACCAGGACCAG...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGACATACTCTCGAGCTTaGTGTTCCAGACGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGTYSRA*CSRRWY
Trigger: GTACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGT...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCCTGCAGGCCAGATGGTaGCTTCACCTTGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SATCTLGDSRLWRTKEACLQARW*LHLGRS
Trigger: GCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAG...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCTGCAGGCCAGATGGTaGCTTCACCTTGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNLQARW*LHLGRS
Trigger: GCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAG...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACAGCTTGCGGCGGGCCCTaGAGGCCAGATGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTACGGP*RPDGAF
Trigger: GAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGC...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCGCTTGCGGCGGGCCCTaGAGGCCAGATGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRACGGP*RPDGAF
Trigger: GAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGC...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGAAGGGAGATGAACTGGTaGGCTTGCGGCGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRREMNW*ACGGPC
Trigger: GCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCT...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCTGTATGTGTCCTCACTaGAGGTGTCGTGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPCMCPH*RCRVWW
Trigger: CCACCACACACGACACCTGCAGTGAGGACACATACA...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTAACTCCTCGGCGACTCTaGGCAGCTCCTCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: LLASLHACCSLVWFRSYLTPRRL*AAPPRN
Trigger: GTTCCGAGGAGGAGCTGCGCAGAGTCGCCGAGGAGT...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTGGAGTCTCTGGTGTCGACTCCTCGGCGACTCTaGGCAGCTCCTCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: CCFPFTSLGRRNLESLVSTPRRL*AAPPRN
Trigger: GTTCCGAGGAGGAGCTGCGCAGAGTCGCCGAGGAGT...CGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCATCTTCTCCTGTAGTTaGAGTTGGGGCAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPIFSCS*SWGSRA
Trigger: TGCCCGACTGCCCCAACTGCAACTACAGGAGAAGAT...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCAGGGTAAAGGTGCAGTaGAGGGTGTGTGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSRVKVQ*RVCGLL
Trigger: GAGAAGCCCACACACCCTGCACTGCACCTTTACCCT...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGACGCAGTCAGGGTCACTaGAGACACTTGGAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRRSQGH*RHLEGR
Trigger: GCGCCCCTCCAAGTGTCTGCAGTGACCCTGACTGCG...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTACCTTGCTCGCTTCGCTaGACGCGTGCTGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELPCSLR*TRAAHW
Trigger: CCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGG...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGAGCTTCCTTTGCTTATaGCTTGCTCGCTTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGSFLCL*LARFAA
Trigger: TGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCT...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCATCCTGGAGGTGCAGGTaGTCCCGGGCCCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RDLTQAGYKSGGSNTNSASWRCR*SRALAS
Trigger: AGAGGCCAGGGCCCGGGAGCACCTGCACCTCCAGGA...TGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCATGCTCCTCCTGGAGGTaGAGGTGCTCCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RDLTQAGYKSGGSNTNSACSSWR*RCSRAL
Trigger: CAGGGCCCGGGAGCACCTGCACCTCCAGGAGGAGCA...TGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCTCCTCCCGCCGCCTCTaGTCCTCCTGGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRSSRRL*SSWRCR
Trigger: CCTGCACCTCCAGGAGGAGCAGAGGCGGCGGGAGGA...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCTCCTCCCGCCGCCTCTaGTCCTCCTGGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGISSRRL*SSWRCR
Trigger: CCTGCACCTCCAGGAGGAGCAGAGGCGGCGGGAGGA...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGATGGTGCAGCCTGGCCTaGCTCTCGCGTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRWCSLA*LSRVPL
Trigger: GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCA...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAAGGAGGGAGATGAACTaGTGCGCTTGCGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETRREMN*CACGGP
Trigger: GGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCT...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTATGGAGCGTGCGGCCTaGCAGAGGGCGCCGTACTCC +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSMERAA*QRAPYS
Trigger: GGAGTACGGCGCCCTCTGCCAGGCCGCACGCTCCAT...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTTCCTCCTCGGAACGCTaGTACCTCTGCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRASSSER*YLCSKV
Trigger: TACCTTGCTGCAGAGGTACCAGCGTTCCGAGGAGGA...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTTCCTGTAGTTGCAGTTaGGGCAGTCGGGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRASCSCS*GSRACS
Trigger: TGAGCATGCCCGACTGCCCCAACTGCAACTACAGGA...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACATCACTACAAAAAGTTaGTGCCGAGCCACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYITTKS*CRATVC
Trigger: ACAGACAGTGGCTCGGCACCAACTTTTTGTAGTGAT...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTCTGTGTTGGGTAGGATaGGGGTGGACTGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVLCWVG*GWTVCF
Trigger: AAAGCAGACAGTCCACCCCCATCCTACCCAACACAG...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCATTCCTCGGGGCGGCTaGGGCCGAGTGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRIPRGG*GRVSVV
Trigger: GACCACAGACACTCGGCCCCAGCCGCCCCGAGGAAT...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACATTCCTCGGGGCGGCTaGGGCCGAGTGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHIPRGG*GRVSVV
Trigger: GACCACAGACACTCGGCCCCAGCCGCCCCGAGGAAT...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCTGCCCTCCTTCTGGTTaGTGGAGGTCGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGCPPSG*WRSRCW
Trigger: CCAGCACCTCGACCTCCACCAACCAGAAGGAGGGCA...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTACTTGCCCTCCTTCTaGTTGGTGGAGGTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSYLPSF*LVEVEV
Trigger: CACCTCGACCTCCACCAACCAGAAGGAGGGCAAGTA...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCGCTCCTCTTTCCTCTTaGTCAGCCGTAAGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPAPLSS*SAVSEA
Trigger: AGCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGC...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTTCCTCCACCCTCCGATaGTCAACGACGCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRASSTLR*STTLSL
Trigger: AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGA...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACAGGTGCTCCCGGGCCCTaGCCTCTGCTTCTAGGCGAG +
Preference number: 4 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTGAPGP*PLLLGE
Trigger: CTCGCCTAGAAGCAGAGGCCAGGGCCCGGGAGCACC...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCGCCTCTGCTCCTCCTaGAGGTGCAGGTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LRCTRAAHWFGFGAIYKLRLCSS*RCRCSR
Trigger: CCGGGAGCACCTGCACCTCCAGGAGGAGCAGAGGCG...CAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTGAAATTTGGAGTCTCTaGTGTCGACGGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVEIWSL*CRRGLQ
Trigger: CTGCAGACCCCGTCGACACCAGAGACTCCAAATTTC...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTGGGGAGGAGAAATTTaGAGTCTCTGGTGTCGACGG +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVWGGEI*SLWCRR
Trigger: CCGTCGACACCAGAGACTCCAAATTTCTCCTCCCCA...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACATGTGGGCCTCCTCGCTaGCTCGCTGCTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETCGPPR*LAAGLA
Trigger: AGCAAGGCCAGCAGCGAGCCAGCGAGGAGGCCCACA...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAATGTGGGCCTCCTCGCTaGCTCGCTGCTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: EDLAGTTVPIRQHRATIECGPPR*LAAGLA
Trigger: AGCAAGGCCAGCAGCGAGCCAGCGAGGAGGCCCACA...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTCTTGTTCTTGCCCTTTaGCTGAGGGGACTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRALVLAL*LRGLCQ
Trigger: CTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAG...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGGGAGTCCTCATTCAGTaGGCAGCAAAGGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGGVLIQ*AAKVAF
Trigger: AAAAGCCACCTTTGCTGCCCACTGAATGAGGACTCC...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCGCGTGGCTCTTGGGGTaGTGCAGCCTGGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGIAWLLG*CSLACL
Trigger: GAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGC...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTGTTGCTGCCTGGAAACGCCAGCGAGGGGCGTaGCTCTTGGGGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EPLWMFPELGTDSVAAWKRQRGA*LLGWCS
Trigger: GCTGCACCACCCCAAGAGCCACGCCCCTCGCTGGCG...TTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR CCA 90 bp CTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTGGTGGTGGGAGGACTTaGCGGGAACTACTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LLQLPLLMPCSLRCTRAAGGGRT*RELLFQ
Trigger: TTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACC...AGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR CCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTCCGAGGCCGCGGTGGTaGGAGGACTTGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSPRPRW*EDLAGT
Trigger: AGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGG...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCACCGAGGCCGCGGTGGTaGGAGGACTTGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: RDLTQAGYKSGGSNTNSAPRPRW*EDLAGT
Trigger: AGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGG...TGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGATGCAAACTCCTATCTaGCCACGGCCCAGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SYNRRSLTHRLHAHELTAMQTPI*PRPRPP
Trigger: CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCAT...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGAGGCAACGGAGCCACGTaGATGATGCAAACTCCTATC +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGGNGAT*MMQTPI
Trigger: GATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTGGAGACAGTAGATTGTaGAGAACAAAGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GNGATWMMQTPIWPRPRPGDSRL*RTKEAC
Trigger: GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCC...AGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGGGAGACAGTAGATTGTaGAGAACAAAGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQGDSRL*RTKEAC
Trigger: GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCC...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CAA 72 bp ACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATaGTGGAGAACAAAGGAGGCCTGCCCCGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TNSATCTLGDSR*WRTKEACPAQP
Trigger: GGGCTGGGCGGGGCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TTCTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCGTGTAGCGCACTTCTaGCCAGTAGTTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FSSSFLCLCLARFAARVLRVAHF*PVVLQL
Trigger: CAGCTGCAGAACTACTGGTCAGAAGTGCGCTACACG...CAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCCCCCGAGCTTGCAGATaGCACACTGGGCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRPRACR*HTGRAP
Trigger: AGGAGCCCGCCCAGTGTGTCATCTGCAAGCTCGGGG...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGATCAGCAAATTTGGCTaGCAATGGTGCAACATCTTC +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVISKFG*QWCNIF
Trigger: GAAGATGTTGCACCATTGTCAGCCAAATTTGCTGAT...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCCTGGTACTGCTTATCTaGGGAGACTCATCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPLVLLI*GDSSFR
Trigger: CCTGAAGGATGAGTCTCCTCAGATAAGCAGTACCAG...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CTCCTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCACTGATGACGTGGCCATaGCAACTTTATTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLAGSLLALLVCLSFCLPLMTWP*QLYLLP
Trigger: TGGAAGCAAATAAAGTTGTCATGGCCACGTCATCAG...TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTTGTGGTCCTCCTTGCTaGTGCCATGAAACACGTCAC +
Preference number: 4 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRACGPPC*CHETRH
Trigger: GTGACGTGTTTCATGGCATCAGCAAGGAGGACCACA...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGACCACCTTAGCCTTTaGCTCAGTCTGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETDHLSL*LSLGPG
Trigger: CCCCGGGCCCAGACTGAGTCAAAGGCTAAGGTGGTC...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCAGCTTGCTGTTCTGCTaGTGCTCACCGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGSLLFC*CSPGEV
Trigger: CACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCT...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCAACAGACTTGATGGTGTaGGTACTGGGTGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: HELTAWAEHQLLGLGFQATDLMV*VLGGLV
Trigger: AACAAGCCCACCCAGTACTCACACCATCAAGTCTGT...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GAAACGATCCTCCTCTTCTTCCTCATCCTCCTCCTCCTCCCGCCGCCTCTGCTCACAGACTTGATGGTGTaGGTACTGGGTGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: ETILLFFLILLLLPPPLLTDLMV*VLGGLV
Trigger: AACAAGCCCACCCAGTACTCACACCATCAAGTCTGT...GAGCAGAGGCGGCGGGAGGAGGAGGAGGATGAGGAAGAAGAGGAGGATCGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR GCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGCTGGTCCTGGTCATCTaGCAGCGGGGTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQLVLVI*QRGSCL
Trigger: CAGGCAGGAACCCCGCTGGCAGATGACCAGGACCAG...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACACTGCAGGCCAGATGGTaGCTTCACCTTGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETLQARW*LHLGRS
Trigger: GCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAG...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCATGAACTGGTGCGCTTaGGGCGGGCCCTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRMNWCA*GGPCRP
Trigger: TGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCAT...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAAAGGGAGATGAACTGGTaGGCTTGCGGCGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQREMNW*ACGGPC
Trigger: GCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCT...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACTCCTCGGCGACTCTaGGCAGCTCCTCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRTPRRL*AAPPRN
Trigger: GTTCCGAGGAGGAGCTGCGCAGAGTCGCCGAGGAGT...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATTGGGGCAGTCGGGCATaGTCAGCCGGGACGATAACA +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNWGSRA*SAGTIT
Trigger: TGTTATCGTCCCGGCTGAGCATGCCCGACTGCCCCA...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGACTACAAAAAGTTGGTaGCGAGCCACTGTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQTTKSW*RATVCE
Trigger: CTCACAGACAGTGGCTCGGCACCAACTTTTTGTAGT...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTACTACAAAAAGTTGGTaGCGAGCCACTGTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GNGATWMMQTPIWPRPRPTTKSW*RATVCE
Trigger: CTCACAGACAGTGGCTCGGCACCAACTTTTTGTAGT...AGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCCATTCTCGCAGCGGTaGCCTTCGCAGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNPFSQR*PSQSGS
Trigger: TGACCCTGACTGCGAAGGGCACCGCTGCGAGAATGG...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTGGAGTCTCTGGTGTCGCCATTCTCGCAGCGGTaGCCTTCGCAGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: CCFPFTSLGRRNLESLVSPFSQR*PSQSGS
Trigger: TGACCCTGACTGCGAAGGGCACCGCTGCGAGAATGG...CGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGACCATTCTCGCAGCGGTaGCCTTCGCAGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRPFSQR*PSQSGS
Trigger: TGACCCTGACTGCGAAGGGCACCGCTGCGAGAATGG...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATTGGTGGAGGTCGAGGTaGTGGAGCTGTGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNWWRSR*WSCAQS
Trigger: GCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCA...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACCCTTGCTCGCTTCGCTaGACGCGTGCTGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHPCSLR*TRAAHW
Trigger: CCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGG...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TTCTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCCTTTGCTTATGCCTTaGTCGCTTCGCTGCACGCGT +
Preference number: 4 (lower is better)
Translates to: FSSSFLCLCLARFAARVLPLLMP*SLRCTR
Trigger: ACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGG...CAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGCTTCCTTTGCTTATaGCTTGCTCGCTTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPSFLCL*LARFAA
Trigger: TGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCT...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGTCCTCCAGCTTCCTTTaGTTATGCCTTGCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRSSSFL*LCLARF
Trigger: GAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGA...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATCCTCCAGCTTCCTTTaGTTATGCCTTGCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGSSSFL*LCLARF
Trigger: GAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGA...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTGGTGTCGACGGGGTCTaGAGCATCCCCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSGVDGV*SIPISP
Trigger: GGGGCTGATGGGGATGCTGCAGACCCCGTCGACACC...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCTCCTCGCTGGCTCGCTaGTGGCCTTGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGISSLAR*WPCWSA
Trigger: GGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGA...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCTCTCCTCTCTTTTCTaGTCTGTGATGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: GNGATWMMQTPIWPRPRPLSSLF*SVMDMR
Trigger: CCTCATGTCCATCACAGAGCAGAAAAGAGAGGAGAG...AGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTGCAGTGAGCCAAGATTaGACCATTGTACCCCAGACT +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVAVSQD*TIVPQT
Trigger: AGTCTGGGGTACAATGGTGCAATCTTGGCTCACTGC...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324666.9
CDS-3UTR CCA 90 bp TTCTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGTTCAGCCTGCTGTGTTaGGTAGGATGGGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: FSSSFLCLCLARFAARVLFSLLC*VGWGWT
Trigger: AGTCCACCCCCATCCTACCCAACACAGCAGGCTGAA...CAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTGGCTGTCATTGCAGATaGTGTCAGTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVGCHCR*CQSRSF
Trigger: GAAGCTTCTGGACTGACACCATCTGCAATGACAGCC...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGGATGACACTCTGAACTaGCTGTTGCTGGACTGCACT +
Preference number: 4 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRDDTLN*LLLDCT
Trigger: AGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATC...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCAATTCCTCGGGGCGGCTaGGGCCGAGTGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: ELLFQSDSTELQSKESHAIPRGG*GRVSVV
Trigger: GACCACAGACACTCGGCCCCAGCCGCCCCGAGGAAT...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGATTCCTCGGGGCGGCTaGGGCCGAGTGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LRCTRAAHWFGFGAIYKLIPRGG*GRVSVV
Trigger: GACCACAGACACTCGGCCCCAGCCGCCCCGAGGAAT...CAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTATGGAGGTCGAGGTGCTaGAGCTGTGCTCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELWRSRC*SCAQSS
Trigger: GCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCA...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGTGGAGGTCGAGGTGCTaGAGCTGTGCTCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRWRSRC*SCAQSS
Trigger: GCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCA...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGTGGAGGTCGAGGTGCTaGAGCTGTGCTCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LATSQGDQTQTAQRVHSEWRSRC*SCAQSS
Trigger: GCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCA...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGACCTCCTTCTGGTTGGTaGAGGTCGAGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRPPSGW*RSRCWS
Trigger: GCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGG...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTGGAGTCTCTGGTGTCGCCTCCTTCTGGTTGGTaGAGGTCGAGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CCFPFTSLGRRNLESLVSPPSGW*RSRCWS
Trigger: GCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGG...CGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTGTCACCCAGGCATGATCTCGGCTCACTGGAACCTCCATCTTCCAGGCTCAAGTACTTGCCCTCCTTCTaGTTGGTGGAGGTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: LSPRHDLGSLEPPSSRLKYLPSF*LVEVEV
Trigger: CACCTCGACCTCCACCAACCAGAAGGAGGGCAAGTA...CTTGAGCCTGGAAGATGGAGGTTCCAGTGAGCCGAGATCATGCCTGGGTGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCAACGCGTGCTGCTCACTaGTTTGGTTTCGGAGCTATT +
Preference number: 4 (lower is better)
Translates to: HELTAWAEHQLLGLGFQATRAAH*FGFGAI
Trigger: AATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGCGCCTCTGCTCCTCCTaGAGGTGCAGGTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRRLCSS*RCRCSR
Trigger: CCGGGAGCACCTGCACCTCCAGGAGGAGCAGAGGCG...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGCCATTTCCTTCTTTATaGTGCTGCATGATGTCGAAG +
Preference number: 4 (lower is better)
Translates to: VDDANSYLATAQASEAAVPFPSL*CCMMSK
Trigger: CTTCGACATCATGCAGCACCATAAAGAAGGAAATGG...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCATGTGGGCCTCCTCGCTaGCTCGCTGCTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RDLTQAGYKSGGSNTNSACGPPR*LAAGLA
Trigger: AGCAAGGCCAGCAGCGAGCCAGCGAGGAGGCCCACA...TGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGCCGAGGCCGCGGTGGTaGGAGGACTTGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRPRPRW*EDLAGT
Trigger: AGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGG...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCAGGAGACAGTAGATTGTaGAGAACAAAGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: HELTAWAEHQLLGLGFQAGDSRL*RTKEAC
Trigger: GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCC...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTATCTTGGCTCACTGGCTaGTCAAGGCCGCCATGCCTC +
Preference number: 4 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELSWLTG*SRPPCL
Trigger: GAGGCATGGCGGCCTTGACCAGCCAGTGAGCCAAGA...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637812.2
3UTR CAA 72 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTaGGAGTCTCTGGTGTCGACGGGGTCTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: CCFPFTSLGRRN*ESLVSTGSAAS
Trigger: GGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTGTTGCTGCCTGGAAACCCCGAGCTTGCAGATaGCACACTGGGCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EPLWMFPELGTDSVAAWKPRACR*HTGRAP
Trigger: AGGAGCCCGCCCAGTGTGTCATCTGCAAGCTCGGGG...TTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGTGCTGCTGAATTGTaGTGGGAGAGCTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: EDLAGTTVPIRQHRATIEGAAEL*WESWSR
Trigger: CCGGCTCCAGCTCTCCCATCACAATTCAGCAGCACC...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGCCTGGGGTGCTGCTaGATTGTGATGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRSLGCC*IVMGEL
Trigger: CAGCTCTCCCATCACAATTCAGCAGCACCCCAGGCT...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGCTGATGACGTGGCCATaGCAACTTTATTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPLMTWP*QLYLLP
Trigger: TGGAAGCAAATAAAGTTGTCATGGCCACGTCATCAG...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCAGGAGGTCTCTTGGATaGCACTCTGAACTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSRRSLG*HSELAV
Trigger: AACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCT...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AGGGGACTCTGCCAGCACCAGCTTGCTGTTCTGCTGATGCTCACCGGGAGAGGTTCCTTGCTGATGCCATaGAACACGTCACCTACTGAA +
Preference number: 4 (lower is better)
Translates to: RGLCQHQLAVLLMLTGRGSLLMP*NTSPTE
Trigger: TTCAGTAGGTGACGTGTTTCATGGCATCAGCAAGGA...ACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCTTCTTGCCCTTTGGCTaGGGGGACTCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRFLPFG*GDSAST
Trigger: GGTGCTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAA...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGACGGAGCCACGTGGATaGTGCAAACTCCTATCTGGC +
Preference number: 4 (lower is better)
Translates to: SYNRRSLTHRLHAHELTATEPRG*CKLLSG
Trigger: GCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGT...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCCCCGGTGAGGACACATaGCAGGACAGGGCGCAATGC +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGIPGEDT*QDRAQC
Trigger: GCATTGCGCCCTGTCCTGTCATGTGTCCTCACCGGG...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACACCCGGTGAGGACACATaGCAGGACAGGGCGCAATGC +
Preference number: 4 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTPGEDT*QDRAQC
Trigger: GCATTGCGCCCTGTCCTGTCATGTGTCCTCACCGGG...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCATCCCGGCGCCGCGGCTaGCCAGAGTTAGAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: RDLTQAGYKSGGSNTNSASRRRG*PELESN
Trigger: ATTGGACTCTAACTCTGGTCAGCCGCGGCGCCGGGA...TGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR GCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTCGTCCAGCTCCAATATaGAGGTCTGCATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVRPAPI*RSACHC
Trigger: ACAATGACATGCAGACCTGCATATTGGAGCTGGACG...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
CDS-3UTR GCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAATGCCAGCGGGGTTCCTaGCTGGCGGTAGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAECQRGS*LAVDAA
Trigger: CGCTGCATCTACCGCCAGGCAGGAACCCCGCTGGCA...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTACATACTCTCGAGCTTaGTGTTCCAGACGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LLQLPLLMPCSLRCTRAATYSRA*CSRRWY
Trigger: GTACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGT...AGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCGCCGCAGCCGACAGCTaGCGGAGCAGGCGGACCTTC +
Preference number: 4 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQIAAADS*RSRRTF
Trigger: GAAGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGC...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTGCGGCGGGCCCTaGAGGCCAGATGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: FGAIYKLQQILHPPMVNDACGGP*RPDGAF
Trigger: GAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGC...GTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAAGGGAGATGAACTGGTaGGCTTGCGGCGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEREMNW*ACGGPC
Trigger: GCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCT...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGGTGCTGATGGAGCGTaGGGCCTGGCAGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPGADGA*GLAEGA
Trigger: GGCGCCCTCTGCCAGGCCGCACGCTCCATCAGCACC...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCACTCCTCGGCGACTCTaGGCAGCTCCTCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRTPRRL*AAPPRN
Trigger: GTTCCGAGGAGGAGCTGCGCAGAGTCGCCGAGGAGT...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCAACTACAAAAAGTTGGTaGCGAGCCACTGTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: HELTAWAEHQLLGLGFQATTKSW*RATVCE
Trigger: CTCACAGACAGTGGCTCGGCACCAACTTTTTGTAGT...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCTGGGGCTGCAAGATTTaGAAGGTGAGGTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGWGCKI*KVRCGG
Trigger: GCCTCCACACCTCACCTTGCAAATCTTGCAGCCCCA...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTCGCAGTCAGGGTCACTaGAGACACTTGGAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSRSQGH*RHLEGR
Trigger: GCGCCCCTCCAAGTGTCTGCAGTGACCCTGACTGCG...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCCGCAGTCAGGGTCACTaGAGACACTTGGAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRRSQGH*RHLEGR
Trigger: GCGCCCCTCCAAGTGTCTGCAGTGACCCTGACTGCG...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACCCATTCTCGCAGCGGTaGCCTTCGCAGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHPFSQR*PSQSGS
Trigger: TGACCCTGACTGCGAAGGGCACCGCTGCGAGAATGG...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACATGGTGGAGGTCGAGGTaGTGGAGCTGTGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETWWRSR*WSCAQS
Trigger: GCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCA...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTGGAGTCTCTGGTGTCGTCGCTGCACGCGTGCTaGTCACTGGTTTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: CCFPFTSLGRRNLESLVSSLHAC*SLVWFR
Trigger: CCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGA...CGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGCTTCGCTGCACGCGTaGTGCTCACTGGTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGASLHA*CSLVWF
Trigger: AAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGC...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACCTTGCTCGCTTCGCTaGACGCGTGCTGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: ELLFQSDSTELQSKESHAPCSLR*TRAAHW
Trigger: CCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGG...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTAGCTTCCTTTGCTTATaGCTTGCTCGCTTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRASFLCL*LARFAA
Trigger: TGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCT...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTTCCTCCAGCTTCCTTTaGTTATGCCTTGCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRASSSFL*LCLARF
Trigger: GAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGA...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGCTGGCCTTGCTGGTCTaGCTCAGCTTCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LATSQGDQTQTAQRVHSELALLV*LSFCLP
Trigger: TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAG...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCCAGGACAGGGCGCAATaGAGAGGCAACGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRQDRAQ*RGNGAT
Trigger: CGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTG...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTTGGCCTCTCCTTGCAGCTGGAGGCTCATaGACTCACCCCGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: EISSEHVQLGAVFTWPLLAAGGS*THPAVP
Trigger: GGGCACGGCGGGGTGAGTGCATGAGCCTCCAGCTGC...AAGGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CCA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACCAGAGACTGGTCCTaGTCATCTGCCAGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: LATSQGDQTQTAQRVHSETRDWS*SSASGV
Trigger: AACCCCGCTGGCAGATGACCAGGACCAGTCTCTGGT...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTAACCAGAGACTGGTCCTaGTCATCTGCCAGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: LLASLHACCSLVWFRSYLTRDWS*SSASGV
Trigger: AACCCCGCTGGCAGATGACCAGGACCAGTCTCTGGT...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTGTTGCTGCCTGGAAAGCCCTGCAGGCCAGATaGTGCCTTCACCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: EPLWMFPELGTDSVAAWKALQAR*CLHLGR
Trigger: GCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGC...TTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGCGTCGATCCTCTTCTaGCACTCCAGCCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: TELQSKESHAQTTRTRANASILF*HSSHSS
Trigger: CGAGGAGTGGCTGGAGTGCCAGAAGAGGATCGACGC...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCGCGTCGATCCTCTTCTaGCACTCCAGCCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRASILF*HSSHSS
Trigger: CGAGGAGTGGCTGGAGTGCCAGAAGAGGATCGACGC...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACTTAACATGCGCTGCTTaGTTTTCATTGTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYLTCAA*FSLSSA
Trigger: AGCAGATGACAATGAAAACCAAGCAGCGCATGTTAA...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCAAGGATCCACTTGAAGTaGGAGCTGGTGAATGTGGAT +
Preference number: 4 (lower is better)
Translates to: HELTAWAEHQLLGLGFQARIHLK*ELVNVD
Trigger: ATCCACATTCACCAGCTCCCACTTCAAGTGGATCCT...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTAGGATCCACTTGAAGTaGGAGCTGGTGAATGTGGAT +
Preference number: 4 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFRIHLK*ELVNVD
Trigger: ATCCACATTCACCAGCTCCCACTTCAAGTGGATCCT...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGAGGATCCACTTGAAGTaGGAGCTGGTGAATGTGGAT +
Preference number: 4 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRRIHLK*ELVNVD
Trigger: ATCCACATTCACCAGCTCCCACTTCAAGTGGATCCT...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCCTGAGGAACTACTGCTaGTACTGCTTATCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPLRNYC*YCLSEE
Trigger: CTCCTCAGATAAGCAGTACCAGCAGTAGTTCCTCAG...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTGTCACCCAGGCATGATCTCGGCTCACTGGAACCTCCATCTTCCAGGCTCAAGCTGTGTTGGGTAGGATaGGGGTGGACTGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LSPRHDLGSLEPPSSRLKLCWVG*GWTVCF
Trigger: AAAGCAGACAGTCCACCCCCATCCTACCCAACACAG...CTTGAGCCTGGAAGATGGAGGTTCCAGTGAGCCGAGATCATGCCTGGGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCGCAGTGCAGGGTGTGTaGGCTTCTCTGGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: SATCTLGDSRLWRTKEACAVQGV*ASLGSR
Trigger: TCTTGAGCCCAGAGAAGCCCACACACCCTGCACTGC...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAGCAGTGCAGGGTGTGTaGGCTTCTCTGGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRAVQGV*ASLGSR
Trigger: TCTTGAGCCCAGAGAAGCCCACACACCCTGCACTGC...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATAGGGCGTGGCAGGTGTaGAACAGTGTGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNRAWQV*NSVQRH
Trigger: GTGCCTTTGCACACTGTTCCACACCTGCCACGCCCT...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTGGAGTCTCTGGTGTCGAGGGCGTGGCAGGTGTaGAACAGTGTGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: CCFPFTSLGRRNLESLVSRAWQV*NSVQRH
Trigger: GTGCCTTTGCACACTGTTCCACACCTGCCACGCCCT...CGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTAGTGGATGAGAGGGCGTaGCAGGTGTGGAACAGTGTG +
Preference number: 4 (lower is better)
Translates to: LLASLHACCSLVWFRSYLVDERA*QVWNSV
Trigger: CACACTGTTCCACACCTGCCACGCCCTCTCATCCAC...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCATTGCTAGATGGAGGTaGAAGGGCTTCCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSIARWR*KGFRSC
Trigger: ACAAGACCGGAAGCCCTTCCACCTCCATCTAGCAAT...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCCAAACCCAGGAGTTGTaGTTGCTGTTTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPQTQEL*LLFWGM
Trigger: CATTCCCCAAAACAGCAACCACAACTCCTGGGTTTG...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGATGCCCTCCTTCTGGTTaGTGGAGGTCGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRCPPSG*WRSRCW
Trigger: CCAGCACCTCGACCTCCACCAACCAGAAGGAGGGCA...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAACTTGTTGGTGCAGCTaGAGGCCCGCCGTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETTCWCS*RPAVPK
Trigger: TTTGGGCACGGCGGGCCTCCAGCTGCACCAACAAGT...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTATAATTTCTACTTGTTaGTGCAGCTGGAGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRAIISTC*CSWRPA
Trigger: GGCGGGCCTCCAGCTGCACCAACAAGTAGAAATTAT...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CCA 90 bp TTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGGTGCTCCCGGGCCCTaGCCTCTGCTTCTAGGCGAG +
Preference number: 4 (lower is better)
Translates to: FGAIYKLQQILHPPMVNDGAPGP*PLLLGE
Trigger: CTCGCCTAGAAGCAGAGGCCAGGGCCCGGGAGCACC...GTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGCCCCTAGCCCTGGCCTaGGCTCTGAGTGGTTCATAT +
Preference number: 4 (lower is better)
Translates to: LATSQGDQTQTAQRVHSEPLALA*ALSGSY
Trigger: ATATGAACCACTCAGAGCCCAGGCCAGGGCTAGGGG...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGCCCCTAGCCCTGGCCTaGGCTCTGAGTGGTTCATAT +
Preference number: 4 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRPLALA*ALSGSY
Trigger: ATATGAACCACTCAGAGCCCAGGCCAGGGCTAGGGG...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATCCCATTCACCTCCTTaGGGAGGAGAAATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGSHSPP*GGEIWS
Trigger: ACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGA...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCTCCCATTCACCTCCTTaGGGAGGAGAAATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPSHSPP*GGEIWS
Trigger: ACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGA...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTTCCCATTCACCTCCTTaGGGAGGAGAAATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFSHSPP*GGEIWS
Trigger: ACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGA...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACCGCTGCTGGCCTTGCTaGTCTGCCTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TELQSKESHAQTTRTRANRCWPC*SASASA
Trigger: AGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCG...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGCGCTGCTGGCCTTGCTaGTCTGCCTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQRCWPC*SASASA
Trigger: AGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCG...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCTCGCTGGCTCGCTGCTaGCCTTGCTGGTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGISLARC*PCWSAS
Trigger: TGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGA...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAATCTGGGCCCGGGGCTTaGACTGCCCCTCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQSGPGA*TAPLWP
Trigger: AGGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGA...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACGCCTTTGACTCAGTCTaGGCCCGGGGCTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHAFDSV*ARGLDC
Trigger: GCAGTCCAAGCCCCGGGCCCAGACTGAGTCAAAGGC...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGCGTGGCTCTTGGGGTaGTGCAGCCTGGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKAWLLG*CSLACL
Trigger: GAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGC...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGCGCTTGGCGTCGGCTaGGCTCATGGCGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: VFNFLVLQGILHKLATSQALGVG*AHGGRG
Trigger: TCCCCGCCCGCCATGAGCCCAGCCGACGCCAAGCGC...CTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR CCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTCGGGCACACCCACAGTaGCAGGTGCAGCACGCTGTT +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSRAHPQ*QVQHAV
Trigger: AACAGCGTGCTGCACCTGCCACTGTGGGTGTGCCCG...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR TCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGAGCCTGGGGTGCTGCTaGATTGTGATGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQSLGCC*IVMGEL
Trigger: CAGCTCTCCCATCACAATTCAGCAGCACCCCAGGCT...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGATCAGCAAATTTGGCTaGCAATGGTGCAACATCTTC +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGISKFG*QWCNIF
Trigger: GAAGATGTTGCACCATTGTCAGCCAAATTTGCTGAT...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGGAGGAGAAATTTGGAGTCTCTGGTGTCGACGGGGTCTGCAGCATCCCCATCAAGGAGGTCTCTTGGATaGCACTCTGAACTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GRRNLESLVSTGSAASPSRRSLG*HSELAV
Trigger: AACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCT...TGATGGGGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATTTCTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGGCAAGATTTGCAAGGTaGGGTGTGGAGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LATSQGDQTQTAQRVHSEARFAR*GVEAGE
Trigger: CTCACCTGCCTCCACACCTCACCTTGCAAATCTTGC...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTTTCTTGCCCTTTGGCTaGGGGGACTCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSFLPFG*GDSAST
Trigger: GGTGCTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAA...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGACGGAGCCACGTGGATaGTGCAAACTCCTATCTGGC +
Preference number: 4 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRTEPRG*CKLLSG
Trigger: GCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGT...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAATGCCAGCGGGGTTCCTaGCTGGCGGTAGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQCQRGS*LAVDAA
Trigger: CGCTGCATCTACCGCCAGGCAGGAACCCCGCTGGCA...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGCTGGTCCTGGTCATCTaGCAGCGGGGTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRLVLVI*QRGSCL
Trigger: CAGGCAGGAACCCCGCTGGCAGATGACCAGGACCAG...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAGCCGCAGCCGACAGCTaGCGGAGCAGGCGGACCTTC +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEAAADS*RSRRTF
Trigger: GAAGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGC...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCGGTGCTGATGGAGCGTaGGGCCTGGCAGAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSGADGA*GLAEGA
Trigger: GGCGCCCTCTGCCAGGCCGCACGCTCCATCAGCACC...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTAACAGGTGTTTATTATaGAGTTCCCACGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: GNGATWMMQTPIWPRPRPNRCLL*SSHVTW
Trigger: CCAAGTGACGTGGGAACTGCATAATAAACACCTGTT...AGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACCAGTGCGGGCAAGTTaGTCTGAAGAAGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRPVRAS*SEEVAP
Trigger: CGGAGCCACTTCTTCAGAGCAACTTGCCCGCACTGG...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTTGGGGCAGTCGGGCATaGTCAGCCGGGACGATAACA +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSWGSRA*SAGTIT
Trigger: TGTTATCGTCCCGGCTGAGCATGCCCGACTGCCCCA...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGCTGTCCTGGGGCTCCTaGTTCCCAGCACTCCATCTT +
Preference number: 4 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQLSWGS*FPALHL
Trigger: AAGATGGAGTGCTGGGAAGCAGGAGCCCCAGGACAG...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAACGCAGTCAGGGTCACTaGAGACACTTGGAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAERSQGH*RHLEGR
Trigger: GCGCCCCTCCAAGTGTCTGCAGTGACCCTGACTGCG...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGATCGCTGCACGCGTGCTaGTCACTGGTTTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRSLHAC*SLVWFR
Trigger: CCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGA...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGCCTTTGCTTATGCCTTaGTCGCTTCGCTGCACGCGT +
Preference number: 4 (lower is better)
Translates to: LATSQGDQTQTAQRVHSEPLLMP*SLRCTR
Trigger: ACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGG...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGAGGAGAAATTTGGAGTCTCTGGTGTCGACGGGGTCTGCAGCATCCCCATCATCCTCCAGCTTCCTTTaGTTATGCCTTGCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: GRRNLESLVSTGSAASPSSSSFL*LCLARF
Trigger: GAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGA...TGATGGGGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATTTCTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGTCCTCCCGCCGCCTCTaGTCCTCCTGGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKSSRRL*SSWRCR
Trigger: CCTGCACCTCCAGGAGGAGCAGAGGCGGCGGGAGGA...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGGAACAGACTCTGTTaGTGCCTGGAAATTTCTAGT +
Preference number: 4 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQRNRLC*CLEISS
Trigger: ACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCT...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACTTTCCTTCTTTATGGTaGTGCATGATGTCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYFPSLW*CMMSKK
Trigger: TTTCTTCGACATCATGCAGCACCATAAAGAAGGAAA...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGCCCGGGGCTTGGACTaGCCCTCTGTGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAARGLD*PSVALG
Trigger: CCCCAAGGCCACAGAGGGGCAGTCCAAGCCCCGGGC...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACATGGCTGAGGGGACTCTaGCAGCACCAGCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETWLRGL*QHQLAV
Trigger: AACAGCAAGCTGGTGCTGGCAGAGTCCCCTCAGCCA...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACACCAGAGACTGGTCCTaGTCATCTGCCAGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHTRDWS*SSASGV
Trigger: AACCCCGCTGGCAGATGACCAGGACCAGTCTCTGGT...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTATGGTGCCTTCACCTTaGCCGCAGCCGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ILHKLATSQGDQTQTAQRMVPSP*PQPTAA
Trigger: GGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCAT...ACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAGCCCTGCAGGCCAGATaGTGCCTTCACCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQALQAR*CLHLGR
Trigger: GCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGC...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCATGGAGCGTGCGGCCTaGCAGAGGGCGCCGTACTCC +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIMERAA*QRAPYS
Trigger: GGAGTACGGCGCCCTCTGCCAGGCCGCACGCTCCAT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGATGGAGCGTGCGGCCTaGCAGAGGGCGCCGTACTCC +
Preference number: 4 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMMERAA*QRAPYS
Trigger: GGAGTACGGCGCCCTCTGCCAGGCCGCACGCTCCAT...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGATCACTACAAAAAGTTaGTGCCGAGCCACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRITTKS*CRATVC
Trigger: ACAGACAGTGGCTCGGCACCAACTTTTTGTAGTGAT...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGAACATTCACAAGTGTTTaGAGCTTGTTCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGTFTSV*SLFSLL
Trigger: CAGCAGGCTGAACAAGCTCCAAACACTTGTGAATGT...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTCCTACATTCACAAGTGTTTaGAGCTTGTTCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGSLLALLVCLSFCLPFPTFTSV*SLFSLL
Trigger: CAGCAGGCTGAACAAGCTCCAAACACTTGTGAATGT...AGGAAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTACATTCACAAGTGTTTaGAGCTTGTTCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVTFTSV*SLFSLL
Trigger: CAGCAGGCTGAACAAGCTCCAAACACTTGTGAATGT...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCGTGGATGAGAGGGCGTaGCAGGTGTGGAACAGTGTG +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRVDERA*QVWNSV
Trigger: CACACTGTTCCACACCTGCCACGCCCTCTCATCCAC...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAGGTGCTCCCGGGCCCTaGCCTCTGCTTCTAGGCGAG +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATGAPGP*PLLLGE
Trigger: CTCGCCTAGAAGCAGAGGCCAGGGCCCGGGAGCACC...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGAGACTCTGTTGCTGCCTaGAAATTTCTAGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGDSVAA*KFLVSM
Trigger: CATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTC...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTGTTCATATGCCTGGATaGGGAGTGAGAAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRAVHMPG*GVRRGF
Trigger: GAAACCTCTTCTCACTCCCCATCCAGGCATATGAAC...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGAAATTTGGAGTCTCTaGTGTCGACGGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGEIWSL*CRRGLQ
Trigger: CTGCAGACCCCGTCGACACCAGAGACTCCAAATTTC...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTCGCTGCTGGCCTTGCTaGTCTGCCTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSRCWPC*SASASA
Trigger: AGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCG...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGTCGCTGGCTCGCTGCTaGCCTTGCTGGTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRSLARC*PCWSAS
Trigger: TGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGA...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTCTGGGCCCGGGGCTTaGACTGCCCCTCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESSGPGA*TAPLWP
Trigger: AGGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATGCCTTTGACTCAGTCTaGGCCCGGGGCTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: NFLVLQGILHKLATSQGDAFDSV*ARGLDC
Trigger: GCAGTCCAAGCCCCGGGCCCAGACTGAGTCAAAGGC...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGACTTGTTCTTGCCCTTTaGCTGAGGGGACTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRLVLAL*LRGLCQ
Trigger: CTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAG...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACATGGGGTGGTGCAGCCTaGCCTGCCTCTCGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATWGGAA*PASRVS
Trigger: GGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCA...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACACCGAGGCCGCGGTGGTaGGAGGACTTGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATPRPRW*EDLAGT
Trigger: AGTTCCCGCCAAGTCCTCCCACCACCGCGGCCTCGG...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCATGCAAACTCCTATCTaGCCACGGCCCAGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRMQTPI*PRPRPP
Trigger: CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCAT...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAATGCAAACTCCTATCTaGCCACGGCCCAGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: RDLTQAGYKSGGSNTNSAMQTPI*PRPRPP
Trigger: CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCAT...TGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAACAAGCAGGAGGGAGATaGACTGGTGCGCTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQQAGGR*TGALAA
Trigger: CGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTG...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGCGGGCAAGTTGCTCTaGAGAAGTGGCTCCGAAAAG +
Preference number: 4 (lower is better)
Translates to: EDLAGTTVPIRQHRATIEAGKLL*RSGSEK
Trigger: CTTTTCGGAGCCACTTCTTCAGAGCAACTTGCCCGC...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGGCGGGCAAGTTGCTCTaGAGAAGTGGCTCCGAAAAG +
Preference number: 4 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQAGKLL*RSGSEK
Trigger: CTTTTCGGAGCCACTTCTTCAGAGCAACTTGCCCGC...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAGGTGCTGCTGAATTGTaGTGGGAGAGCTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEGAAEL*WESWSR
Trigger: CCGGCTCCAGCTCTCCCATCACAATTCAGCAGCACC...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGAGCCTGGGGTGCTGCTaGATTGTGATGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRCTRAAHWFGFGAIYKLSLGCC*IVMGEL
Trigger: CAGCTCTCCCATCACAATTCAGCAGCACCCCAGGCT...CAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCCTGATGACGTGGCCATaGCAACTTTATTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSLMTWP*QLYLLP
Trigger: TGGAAGCAAATAAAGTTGTCATGGCCACGTCATCAG...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCTCTTGGATGACACTCTaGACTGGCTGTTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGSWMTL*TGCCWT
Trigger: AGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGA...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATTGTGGTCCTCCTTGCTaGTGCCATGAAACACGTCAC +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNCGPPC*CHETRH
Trigger: GTGACGTGTTTCATGGCATCAGCAAGGAGGACCACA...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGCAAGATTTGCAAGGTaGGGTGTGGAGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TELQSKESHAQTTRTRANARFAR*GVEAGE
Trigger: CTCACCTGCCTCCACACCTCACCTTGCAAATCTTGC...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCGCTGAAATTCCTCCTTaGAACGATCCTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSAEIPP*NDPPLL
Trigger: AAGAAGAGGAGGATCGTTTCAAGGAGGAATTTCAGC...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TGGAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTTGGCCTCTCCCCCTGGCCTGGGCTCTaGGTGGTTCATATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: WKFLVSMSNLGQSLLGLSPWPGL*VVHMPG
Trigger: TCCAGGCATATGAACCACTCAGAGCCCAGGCCAGGG...GGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCATTGACTTTTCGTCCTTaGTGTGGTTCAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HELTAWAEHQLLGLGFQALTFRP*CGSAAF
Trigger: AAAAGCAGCTGAACCACATCAAGGACGAAAAGTCAA...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GAAACGATCCTCCTCTTCTTCCTCATCCTCCTCCTCCTCCCGCCGCCTCTGCTCTTGACTTTTCGTCCTTaGTGTGGTTCAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: ETILLFFLILLLLPPPLLLTFRP*CGSAAF
Trigger: AAAAGCAGCTGAACCACATCAAGGACGAAAAGTCAA...GAGCAGAGGCGGCGGGAGGAGGAGGAGGATGAGGAAGAAGAGGAGGATCGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAACGGCCGATACCCCGGTaGGGACACATGACAGGACAG +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQRPIPR*GHMTGQ
Trigger: CTGTCCTGTCATGTGTCCTCACCGGGGTATCGGCCG...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCACAGACTTGATGGTGTaGGTACTGGGTGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGTDLMV*VLGGLV
Trigger: AACAAGCCCACCCAGTACTCACACCATCAAGTCTGT...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCCTGCCTCAGCCTCCTaGGTAGCTGGGATCAAACGT +
Preference number: 4 (lower is better)
Translates to: LRCTRAAHWFGFGAIYKLPASAS*VAGIKR
Trigger: ACGTTTGATCCCAGCTACTCAGGAGGCTGAGGCAGG...CAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR GCA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGCTGGTCCTGGTCATCTaGCAGCGGGGTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKLVLVI*QRGSCL
Trigger: CAGGCAGGAACCCCGCTGGCAGATGACCAGGACCAG...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGCTTGCGGCGGGCCCTaGAGGCCAGATGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAACGGP*RPDGAF
Trigger: GAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGC...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACCAGTGCGGGCAAGTTaGTCTGAAGAAGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQPVRAS*SEEVAP
Trigger: CGGAGCCACTTCTTCAGAGCAACTTGCCCGCACTGG...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGTGTATGTGTCCTCACTaGAGGTGTCGTGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LATSQGDQTQTAQRVHSECMCPH*RCRVWW
Trigger: CCACCACACACGACACCTGCAGTGAGGACACATACA...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGAAACTACTGCTGGTACTaGTTATCTGAGGAGACTCAT +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGNYCWY*LSEETH
Trigger: ATGAGTCTCCTCAGATAAGCAGTACCAGCAGTAGTT...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACTGGCTGTTGCTGGACTaGACTGTGGTAGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHWLLLD*TVVAVQ
Trigger: CTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCA...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCTGGGGCTGCAAGATTTaGAAGGTGAGGTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRWGCKI*KVRCGG
Trigger: GCCTCCACACCTCACCTTGCAAATCTTGCAGCCCCA...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCATCCTGGAGGTGCAGGTaGTCCCGGGCCCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLASWRCR*SRALAS
Trigger: AGAGGCCAGGGCCCGGGAGCACCTGCACCTCCAGGA...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TCTAGCAGAATCCAAGCAGAACCTTTTGAAATATTCCACTTCCCTCTCTGTCTCTCCTGGAGGTGCAGGTaGTCCCGGGCCCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSRIQAEPFEIFHFPLCLSWRCR*SRALAS
Trigger: AGAGGCCAGGGCCCGGGAGCACCTGCACCTCCAGGA...GAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATGCTCCTCCTGGAGGTaGAGGTGCTCCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAECSSWR*RCSRAL
Trigger: CAGGGCCCGGGAGCACCTGCACCTCCAGGAGGAGCA...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AGGGGACTCTGCCAGCACCAGCTTGCTGTTCTGCTGATGCTCACCGGGAGAGGTAACAGACTCTGTTGCTaGCTGGAAATTTCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: RGLCQHQLAVLLMLTGRGNRLCC*LEISSE
Trigger: CTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTT...ACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCGGTGTCGACGGGGTCTaGAGCATCCCCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESGVDGV*SIPISP
Trigger: GGGGCTGATGGGGATGCTGCAGACCCCGTCGACACC...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGAGGTGTCGACGGGGTCTaGAGCATCCCCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SGSSVCSSEPLWMFPELGGVDGV*SIPISP
Trigger: GGGGCTGATGGGGATGCTGCAGACCCCGTCGACACC...TCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATGAGAGTGGCTCATGCTaGTTCCCATTCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNESGSC*FPFTSL
Trigger: CAAGGAGGTGAATGGGAAGCAGCATGAGCCACTCTC...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGGAGAGTGGCTCATGCTaGTTCCCATTCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRESGSC*FPFTSL
Trigger: CAAGGAGGTGAATGGGAAGCAGCATGAGCCACTCTC...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCCTGGCCTTGCTGGTCTaGCTCAGCTTCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGILALLV*LSFCLP
Trigger: TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAG...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCATCCTCGCTGGCTCGCTaGTGGCCTTGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPSSLAR*WPCWSA
Trigger: GGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGA...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGTCCTCGCTGGCTCGCTaGTGGCCTTGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKSSLAR*WPCWSA
Trigger: GGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGA...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTCTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTCTCCTCTCTTTTCTaGTCTGTGATGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: FSSSFLCLCLARFAARVLLSSLF*SVMDMR
Trigger: CCTCATGTCCATCACAGAGCAGAAAAGAGAGGAGAG...CAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCTGGCTGAGGGGACTCTaGCAGCACCAGCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGIWLRGL*QHQLAV
Trigger: AACAGCAAGCTGGTGCTGGCAGAGTCCCCTCAGCCA...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGTATTTTTCTTGTTCTTaGCCTTTGGCTGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRYFSCS*PLAEGT
Trigger: AGTCCCCTCAGCCAAAGGGCAAGAACAAGAAAAATA...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGGGGACTCTGCCAGCACCAGCTTGCTGTTCTGCTGATGCTCACCGGGAGAGGTTATTTTTCTTGTTCTTaGCCTTTGGCTGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: RGLCQHQLAVLLMLTGRGYFSCS*PLAEGT
Trigger: AGTCCCCTCAGCCAAAGGGCAAGAACAAGAAAAATA...ACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAACAGGACAGGGCGCAATaGAGAGGCAACGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQQDRAQ*RGNGAT
Trigger: CGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTG...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCAGGAGGGAGATGAACTaGTGCGCTTGCGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIRREMN*CACGGP
Trigger: GGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTGTTGCTCTGAAGAAGTaGCTCCGAAAAGACCAGATT +
Preference number: 4 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRAVALKK*LRKDQI
Trigger: AATCTGGTCTTTTCGGAGCCACTTCTTCAGAGCAAC...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTAACATGCGCTGCTTaGTTTTCATTGTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGLTCAA*FSLSSA
Trigger: AGCAGATGACAATGAAAACCAAGCAGCGCATGTTAA...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACATCCTGTAGTTGCAGTTaGGGCAGTCGGGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETSCSCS*GSRACS
Trigger: TGAGCATGCCCGACTGCCCCAACTGCAACTACAGGA...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACTCCTGTAGTTGCAGTTaGGGCAGTCGGGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: TELQSKESHAQTTRTRANSCSCS*GSRACS
Trigger: TGAGCATGCCCGACTGCCCCAACTGCAACTACAGGA...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCTTGCAGATGACACACTaGGCGGGCTCCTCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRLQMTH*AGSSQQ
Trigger: TTGCTGAGAGGAGCCCGCCCAGTGTGTCATCTGCAA...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGGTGTGTGGGCTTCTCTaGGCTCAAGAACTGATGGCC +
Preference number: 4 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQVCGLL*AQELMA
Trigger: GGCCATCAGTTCTTGAGCCCAGAGAAGCCCACACAC...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCGCAGTGCAGGGTGTGTaGGCTTCTCTGGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGIAVQGV*ASLGSR
Trigger: TCTTGAGCCCAGAGAAGCCCACACACCCTGCACTGC...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAGTGGATGAGAGGGCGTaGCAGGTGTGGAACAGTGTG +
Preference number: 4 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTVDERA*QVWNSV
Trigger: CACACTGTTCCACACCTGCCACGCCCTCTCATCCAC...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGATTCCTCGGGGCGGCTaGGGCCGAGTGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKIPRGG*GRVSVV
Trigger: GACCACAGACACTCGGCCCCAGCCGCCCCGAGGAAT...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACATTGCAAGGTGAGGTGTaGAGGCAGGTGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTLQGEV*RQVRAQ
Trigger: CTGCGCTCTCACCTGCCTCCACACCTCACCTTGCAA...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACATTGCAAGGTGAGGTGTaGAGGCAGGTGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTLQGEV*RQVRAQ
Trigger: CTGCGCTCTCACCTGCCTCCACACCTCACCTTGCAA...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTGTCACTGCAGACACTTaGAGGGGCGCTAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSVTADT*RGANGA
Trigger: GGCTCCATTAGCGCCCCTCCAAGTGTCTGCAGTGAC...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGGTCACTGCAGACACTTaGAGGGGCGCTAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: LRCTRAAHWFGFGAIYKLVTADT*RGANGA
Trigger: GGCTCCATTAGCGCCCCTCCAAGTGTCTGCAGTGAC...CAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTCCTCCTTCTGGTTGGTaGAGGTCGAGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ILHKLATSQGDQTQTAQRPPSGW*RSRCWS
Trigger: GCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGG...ACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAGGTGCTCCCGGGCCCTaGCCTCTGCTTCTAGGCGAG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEGAPGP*PLLLGE
Trigger: CTCGCCTAGAAGCAGAGGCCAGGGCCCGGGAGCACC...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAACGCCTCTGCTCCTCCTaGAGGTGCAGGTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAERLCSS*RCRCSR
Trigger: CCGGGAGCACCTGCACCTCCAGGAGGAGCAGAGGCG...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGAGTGGTTCATATGCCTaGATGGGGAGTGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SYNRRSLTHRLHAHELTASGSYA*MGSEKR
Trigger: CCTCTTCTCACTCCCCATCCAGGCATATGAACCACT...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTAGAAATTTGGAGTCTCTaGTGTCGACGGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLASLHACCSLVWFRSYLEIWSL*CRRGLQ
Trigger: CTGCAGACCCCGTCGACACCAGAGACTCCAAATTTC...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTATGGGGAGGAGAAATTTaGAGTCTCTGGTGTCGACGG +
Preference number: 4 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELWGGEI*SLWCRR
Trigger: CCGTCGACACCAGAGACTCCAAATTTCTCCTCCCCA...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGATGGGGAGGAGAAATTTaGAGTCTCTGGTGTCGACGG +
Preference number: 4 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRWGGEI*SLWCRR
Trigger: CCGTCGACACCAGAGACTCCAAATTTCTCCTCCCCA...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTCCATTTCCTTCTTTATaGTGCTGCATGATGTCGAAG +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVPFPSL*CCMMSK
Trigger: CTTCGACATCATGCAGCACCATAAAGAAGGAAATGG...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAACGCTGCTGGCCTTGCTaGTCTGCCTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAERCWPC*SASASA
Trigger: AGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCG...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TCTAGCAGAATCCAAGCAGAACCTTTTGAAATATTCCACTTCCCTCTCTGTCTCTCTGGGCCCGGGGCTTaGACTGCCCCTCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSRIQAEPFEIFHFPLCLSGPGA*TAPLWP
Trigger: AGGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGA...GAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAATCAACTTCTCGGTCTaGGGTTTCAGGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRINFSV*GFRQHQ
Trigger: CTGGTGCTGCCTGAAACCCCAGACCGAGAAGTTGAT...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCCACGAGCTAACGGCGTaGGCCGAGCATCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGIHELTA*AEHQLL
Trigger: GAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACCCAGCAGGGTAGGGTaGTGTCCTATGATTCATGCC +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRPSRVG*CPMIHA
Trigger: GGCATGAATCATAGGACACCACCCTACCCTGCTGGG...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR TCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCACAAGCAGGAGGGAGATaGACTGGTGCGCTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPQAGGR*TGALAA
Trigger: CGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTG...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCGCGGGCAAGTTGCTCTaGAGAAGTGGCTCCGAAAAG +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRAGKLL*RSGSEK
Trigger: CTTTTCGGAGCCACTTCTTCAGAGCAACTTGCCCGC...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCCCCCGAGCTTGCAGATaGCACACTGGGCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSPRACR*HTGRAP
Trigger: AGGAGCCCGCCCAGTGTGTCATCTGCAAGCTCGGGG...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACTGCCTGGATGGGGAGTaGGAAGAGGTTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHCLDGE*EEVSGS
Trigger: AGAACCAGAAACCTCTTCTCACTCCCCATCCAGGCA...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACCCCTGGCCTGGGCTCTaGGTGGTTCATATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FGAIYKLQQILHPPMVNDPWPGL*VVHMPG
Trigger: TCCAGGCATATGAACCACTCAGAGCCCAGGCCAGGG...GTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCCATAGGGGTTGGGTTTaGCTTTTCGTCCTTGATGTG +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGHRGWV*LFVLDV
Trigger: CACATCAAGGACGAAAAGTCAAACCCAACCCCTATG...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTGTTGCTGCCTGGAAAAGCTTGCTGTTCTGCTaGTGCTCACCGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: EPLWMFPELGTDSVAAWKSLLFC*CSPGEV
Trigger: CACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCT...TTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAAACGGAGCCACGTGGATaGTGCAAACTCCTATCTGGC +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQTEPRG*CKLLSG
Trigger: GCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGT...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTTGCCAATTGAATTGTTaGCTCTGTCTCCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFCQLNC*LCLLSS
Trigger: AGAAGAAAGGAGACAGAGTCAACAATTCAATTGGCA...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR GCA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTGCCTGGCGGTAGATaGAGCGCACCGTGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQILPGGR*SAPCSA
Trigger: TGCGCTACACGGTGCGCTGCATCTACCGCCAGGCAG...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TCTAGCAGAATCCAAGCAGAACCTTTTGAAATATTCCACTTCCCTCTCTGTCTCTGCCAGCGGGGTTCCTaGCTGGCGGTAGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: SSRIQAEPFEIFHFPLCLCQRGS*LAVDAA
Trigger: CGCTGCATCTACCGCCAGGCAGGAACCCCGCTGGCA...GAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCCTGGTCCTGGTCATCTaGCAGCGGGGTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESLVLVI*QRGSCL
Trigger: CAGGCAGGAACCCCGCTGGCAGATGACCAGGACCAG...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCATGAACTGGTGCGCTTaGGGCGGGCCCTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSMNWCA*GGPCRP
Trigger: TGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCAT...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGGAACGCTGGTACCTCTaGAGCAAGGTACTGTATGTG +
Preference number: 4 (lower is better)
Translates to: LATSQGDQTQTAQRVHSEERWYL*SKVLYV
Trigger: CACATACAGTACCTTGCTGCAGAGGTACCAGCGTTC...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGGAACGCTGGTACCTCTaGAGCAAGGTACTGTATGTG +
Preference number: 4 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRERWYL*SKVLYV
Trigger: CACATACAGTACCTTGCTGCAGAGGTACCAGCGTTC...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTAGAACGCTGGTACCTCTaGAGCAAGGTACTGTATGTG +
Preference number: 4 (lower is better)
Translates to: LLASLHACCSLVWFRSYLERWYL*SKVLYV
Trigger: CACATACAGTACCTTGCTGCAGAGGTACCAGCGTTC...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGACTCCTCGGCGACTCTaGGCAGCTCCTCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKTPRRL*AAPPRN
Trigger: GTTCCGAGGAGGAGCTGCGCAGAGTCGCCGAGGAGT...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTACGGGACGATAACATGTaGCTCATGGTGTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELRDDNM*LMVSVK
Trigger: CTTCACAGACACCATGAGGCACATGTTATCGTCCCG...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGACTACAAAAAGTTGGTaGCGAGCCACTGTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SYNRRSLTHRLHAHELTATTKSW*RATVCE
Trigger: CTCACAGACAGTGGCTCGGCACCAACTTTTTGTAGT...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCTGGGGGTGGACTGTCTaGTTTGCTCTCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGIWGWTV*FALLCP
Trigger: AGGACAGAGGAGAGCAAAGCAGACAGTCCACCCCCA...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACAGGCTCCGGCTGTCATTaGAGATGGTGTCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTGSGCH*RWCQSR
Trigger: TCTGGACTGACACCATCTGCAATGACAGCCGGAGCC...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGGGCTCCGGCTGTCATTaGAGATGGTGTCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LRCTRAAHWFGFGAIYKLGSGCH*RWCQSR
Trigger: TCTGGACTGACACCATCTGCAATGACAGCCGGAGCC...CAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCAAGGGTAAAGGTGCAGTaGAGGGTGTGTGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: ELLFQSDSTELQSKESHARVKVQ*RVCGLL
Trigger: GAGAAGCCCACACACCCTGCACTGCACCTTTACCCT...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGTGTGGAACAGTGTaGAAAGGCACATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRRCGTV*KGTCPW
Trigger: CCATGGACATGTGCCTTTGCACACTGTTCCACACCT...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATTTACTATCCGAGACTaGAGGTGTTTCATTGCTAGA +
Preference number: 4 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGFTIRD*RCFIAR
Trigger: TCTAGCAATGAAACACCTGCAGTCTCGGATAGTAAA...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGTGGGGCTGCAAGATTTaGAAGGTGAGGTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LRCTRAAHWFGFGAIYKLWGCKI*KVRCGG
Trigger: GCCTCCACACCTCACCTTGCAAATCTTGCAGCCCCA...CAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACGCAGCTGTCCTCATCTaGACTCTCGTCCCCATCATC +
Preference number: 4 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHAAVLI*TLVPII
Trigger: GATGATGGGGACGAGAGTGCAGATGAGGACAGCTGC...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACAGCAGCTGTCCTCATCTaGACTCTCGTCCCCATCATC +
Preference number: 4 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTAAVLI*TLVPII
Trigger: GATGATGGGGACGAGAGTGCAGATGAGGACAGCTGC...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACAGCTTCGCTGCACGCGTaGTGCTCACTGGTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTASLHA*CSLVWF
Trigger: AAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGC...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCCCTTGCTCGCTTCGCTaGACGCGTGCTGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESPCSLR*TRAAHW
Trigger: CCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGG...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCAACAGACTCTGTTGCTaGCTGGAAATTTCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSNRLCC*LEISSE
Trigger: CTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTT...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCGAGAGTGGCTCATGCTaGTTCCCATTCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRESGSC*FPFTSL
Trigger: CAAGGAGGTGAATGGGAAGCAGCATGAGCCACTCTC...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTCTGGCCTTGCTGGTCTaGCTCAGCTTCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ILHKLATSQGDQTQTAQRLALLV*LSFCLP
Trigger: TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAG...ACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCATCCTCGCTGGCTCGCTaGTGGCCTTGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLASSLAR*WPCWSA
Trigger: GGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGA...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCCTGCCAGCACCAGCTTaGTGTTCTGCTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRLPAPA*CSADAH
Trigger: GTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAG...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCTGCCAGCACCAGCTTaGTGTTCTGCTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: LRCTRAAHWFGFGAIYKLLPAPA*CSADAH
Trigger: GTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAG...CAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAATGGCTGAGGGGACTCTaGCAGCACCAGCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEWLRGL*QHQLAV
Trigger: AACAGCAAGCTGGTGCTGGCAGAGTCCCCTCAGCCA...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGACAGGACAGGGCGCAATaGAGAGGCAACGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: SGSSVCSSEPLWMFPELGQDRAQ*RGNGAT
Trigger: CGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTG...TCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR CCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAATGGTGCCTTCACCTTaGCCGCAGCCGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPMVPSP*PQPTAA
Trigger: GGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCAT...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAATGGTGCCTTCACCTTaGCCGCAGCCGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATMVPSP*PQPTAA
Trigger: GGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCAT...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCGCCCTGCAGGCCAGATaGTGCCTTCACCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSALQAR*CLHLGR
Trigger: GCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGC...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTGTCACCCAGGCATGATCTCGGCTCACTGGAACCTCCATCTTCCAGGCTCAAGGTTGCTCTGAAGAAGTaGCTCCGAAAAGACCAGATT +
Preference number: 4 (lower is better)
Translates to: LSPRHDLGSLEPPSSRLKVALKK*LRKDQI
Trigger: AATCTGGTCTTTTCGGAGCCACTTCTTCAGAGCAAC...CTTGAGCCTGGAAGATGGAGGTTCCAGTGAGCCGAGATCATGCCTGGGTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAATCCTCCTCGGAACGCTaGTACCTCTGCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQSSSER*YLCSKV
Trigger: TACCTTGCTGCAGAGGTACCAGCGTTCCGAGGAGGA...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGTTAACATGCGCTGCTTaGTTTTCATTGTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRLTCAA*FSLSSA
Trigger: AGCAGATGACAATGAAAACCAAGCAGCGCATGTTAA...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACATTGCAGATGACACACTaGGCGGGCTCCTCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTLQMTH*AGSSQQ
Trigger: TTGCTGAGAGGAGCCCGCCCAGTGTGTCATCTGCAA...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAATTCAGCCTGCTGTGTTaGGTAGGATGGGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQFSLLC*VGWGWT
Trigger: AGTCCACCCCCATCCTACCCAACACAGCAGGCTGAA...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGGGCTGTCATTGCAGATaGTGTCAGTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LATSQGDQTQTAQRVHSEGCHCR*CQSRSF
Trigger: GAAGCTTCTGGACTGACACCATCTGCAATGACAGCC...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCGTGTGTGGGCTTCTCTaGGCTCAAGAACTGATGGCC +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRVCGLL*AQELMA
Trigger: GGCCATCAGTTCTTGAGCCCAGAGAAGCCCACACAC...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATGATGACACTCTGAACTaGCTGTTGCTGGACTGCACT +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNDDTLN*LLLDCT
Trigger: AGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATC...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGTTGCAAGGTGAGGTGTaGAGGCAGGTGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRLQGEV*RQVRAQ
Trigger: CTGCGCTCTCACCTGCCTCCACACCTCACCTTGCAA...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCCAAACCCAGGAGTTGTaGTTGCTGTTTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGQTQEL*LLFWGM
Trigger: CATTCCCCAAAACAGCAACCACAACTCCTGGGTTTG...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAGTCACTGCAGACACTTaGAGGGGCGCTAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEVTADT*RGANGA
Trigger: GGCTCCATTAGCGCCCCTCCAAGTGTCTGCAGTGAC...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACCCATCATCCTGCTGTaGGTCGTAGACACCATTCTC +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRPIILL*VVDTIL
Trigger: GAGAATGGTGTCTACGACCCACAGCAGGATGATGGG...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACATACTTGCCCTCCTTCTaGTTGGTGGAGGTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTYLPSF*LVEVEV
Trigger: CACCTCGACCTCCACCAACCAGAAGGAGGGCAAGTA...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAATCCTCCACCCTCCGATaGTCAACGACGCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQSSTLR*STTLSL
Trigger: AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGA...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGTGGTTCATATGCCTaGATGGGGAGTGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRSGSYA*MGSEKR
Trigger: CCTCTTCTCACTCCCCATCCAGGCATATGAACCACT...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTGGAGTCTCTGGTGTCGAGTGGTTCATATGCCTaGATGGGGAGTGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CCFPFTSLGRRNLESLVSSGSYA*MGSEKR
Trigger: CCTCTTCTCACTCCCCATCCAGGCATATGAACCACT...CGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCGCCTTTGACTCAGTCTaGGCCCGGGGCTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESAFDSV*ARGLDC
Trigger: GCAGTCCAAGCCCCGGGCCCAGACTGAGTCAAAGGC...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTGCCTTTGACTCAGTCTaGGCCCGGGGCTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: SVCSSEPLWMFPELGTDSAFDSV*ARGLDC
Trigger: GCAGTCCAAGCCCCGGGCCCAGACTGAGTCAAAGGC...AGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCGGAGTCCTCATTCAGTaGGCAGCAAAGGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SATCTLGDSRLWRTKEACGVLIQ*AAKVAF
Trigger: AAAAGCCACCTTTGCTGCCCACTGAATGAGGACTCC...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGATCAACTTCTCGGTCTaGGGTTTCAGGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQINFSV*GFRQHQ
Trigger: CTGGTGCTGCCTGAAACCCCAGACCGAGAAGTTGAT...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACATGCCCTTGGGAGCCATaGAAAGGGCCAATTTGCTCG +
Preference number: 4 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTCPWEP*KGPICS
Trigger: CGAGCAAATTGGCCCTTTCCATGGCTCCCAAGGGCA...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR CCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGAAAAATCTTGGCTCACTaGCTGGTCAAGGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRKILAH*LVKAAM
Trigger: CATGGCGGCCTTGACCAGCCAGTGAGCCAAGATTTT...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS-3UTR TCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCACAAGCAGGAGGGAGATaGACTGGTGCGCTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAQAGGR*TGALAA
Trigger: CGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTG...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAACACGTGAGGATGTGTaGGAGACTGCAGTCATCGCA +
Preference number: 4 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTTREDV*ETAVIA
Trigger: TGCGATGACTGCAGTCTCTCACACATCCTCACGTGT...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAGGTGCTGCTGAATTGTaGTGGGAGAGCTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATGAAEL*WESWSR
Trigger: CCGGCTCCAGCTCTCCCATCACAATTCAGCAGCACC...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCTCTTGGATGACACTCTaGACTGGCTGTTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRSWMTL*TGCCWT
Trigger: AGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGA...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCAGGAGGTCTCTTGGATaGCACTCTGAACTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRRRSLG*HSELAV
Trigger: AACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCT...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGTCCTTGCTGATGCCATaGAACACGTCACCTACTGAA +
Preference number: 4 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRSLLMP*NTSPTE
Trigger: TTCAGTAGGTGACGTGTTTCATGGCATCAGCAAGGA...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCGACCACCTTAGCCTTTaGCTCAGTCTGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSDHLSL*LSLGPG
Trigger: CCCCGGGCCCAGACTGAGTCAAAGGCTAAGGTGGTC...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAGACCACCTTAGCCTTTaGCTCAGTCTGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEDHLSL*LSLGPG
Trigger: CCCCGGGCCCAGACTGAGTCAAAGGCTAAGGTGGTC...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGAGCTTGCTGTTCTGCTaGTGCTCACCGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKSLLFC*CSPGEV
Trigger: CACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCT...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTAAAGACATCATCAATTaGATTGTTGACTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TRTRANGVGRASTSRSGVKDIIN*IVDSVS
Trigger: GGAGACAGAGTCAACAATTCAATTGATGATGTCTTT...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCGGTGGGCAGATCACTTaGGGCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIGGQIT*GQEFET
Trigger: GGTCTCGAACTCCTGGCCTCAAGTGATCTGCCCACC...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505311.5
CDS-3UTR GCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCCGTCCAGCTCCAATATaGAGGTCTGCATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: SATCTLGDSRLWRTKEACRPAPI*RSACHC
Trigger: ACAATGACATGCAGACCTGCATATTGGAGCTGGACG...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
CDS-3UTR GCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCACTGCCTGGCGGTAGATaGAGCGCACCGTGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLALPGGR*SAPCSA
Trigger: TGCGCTACACGGTGCGCTGCATCTACCGCCAGGCAG...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCACTGGTCCTGGTCATCTaGCAGCGGGGTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLALVLVI*QRGSCL
Trigger: CAGGCAGGAACCCCGCTGGCAGATGACCAGGACCAG...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGAACATACTCTCGAGCTTaGTGTTCCAGACGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRTYSRA*CSRRWY
Trigger: GTACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGT...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAACTGCAGGCCAGATGGTaGCTTCACCTTGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAELQARW*LHLGRS
Trigger: GCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAG...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTTGGCCTCTCCTTCCAGTGCGGGCAAGTTaGTCTGAAGAAGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: EISSEHVQLGAVFTWPLLPVRAS*SEEVAP
Trigger: CGGAGCCACTTCTTCAGAGCAACTTGCCCGCACTGG...AAGGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGCGGGACGATAACATGTaGCTCATGGTGTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQRDDNM*LMVSVK
Trigger: CTTCACAGACACCATGAGGCACATGTTATCGTCCCG...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCTGGGGCAGTCGGGCATaGTCAGCCGGGACGATAACA +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIWGSRA*SAGTIT
Trigger: TGTTATCGTCCCGGCTGAGCATGCCCGACTGCCCCA...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCATCTTCTCCTGTAGTTaGAGTTGGGGCAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGIIFSCS*SWGSRA
Trigger: TGCCCGACTGCCCCAACTGCAACTACAGGAGAAGAT...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCGGATGTGTGAGAGACTaGAGTCATCGCAAGCACATC +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRGCVRD*SHRKHI
Trigger: GATGTGCTTGCGATGACTGCAGTCTCTCACACATCC...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCCTGTCCTGGGGCTCCTaGTTCCCAGCACTCCATCTT +
Preference number: 4 (lower is better)
Translates to: AIYKLQQILHPPMVNDAFLSWGS*FPALHL
Trigger: AAGATGGAGTGCTGGGAAGCAGGAGCCCCAGGACAG...GAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAACTGTCCTGGGGCTCCTaGTTCCCAGCACTCCATCTT +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQLSWGS*FPALHL
Trigger: AAGATGGAGTGCTGGGAAGCAGGAGCCCCAGGACAG...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAATGGGGGTGGACTGTCTaGTTTGCTCTCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEWGWTV*FALLCP
Trigger: AGGACAGAGGAGAGCAAAGCAGACAGTCCACCCCCA...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTGTTGCTGCCTGGAAATGGGGGTGGACTGTCTaGTTTGCTCTCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: EPLWMFPELGTDSVAAWKWGWTV*FALLCP
Trigger: AGGACAGAGGAGAGCAAAGCAGACAGTCCACCCCCA...TTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTGTTGCTGCCTGGAAAGGCTCCGGCTGTCATTaGAGATGGTGTCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: EPLWMFPELGTDSVAAWKGSGCH*RWCQSR
Trigger: TCTGGACTGACACCATCTGCAATGACAGCCGGAGCC...TTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATTGGCTGTTGCTGGACTaGACTGTGGTAGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: NFLVLQGILHKLATSQGDWLLLD*TVVAVQ
Trigger: CTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCA...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAACGCAGTCAGGGTCACTaGAGACACTTGGAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAERSQGH*RHLEGR
Trigger: GCGCCCCTCCAAGTGTCTGCAGTGACCCTGACTGCG...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTGGTGGAGGTCGAGGTaGTGGAGCTGTGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESWWRSR*WSCAQS
Trigger: GCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCCCTTTCGCTGCACGCGTGCTaGTCACTGGTTTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: FINCNKSSTLRWSTTLSLSLHAC*SLVWFR
Trigger: CCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGA...AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TGGAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTTGGCCTCTCCGCTTCGCTGCACGCGTaGTGCTCACTGGTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: WKFLVSMSNLGQSLLGLSASLHA*CSLVWF
Trigger: AAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGC...GGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCACCTTGCTCGCTTCGCTaGACGCGTGCTGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAPCSLR*TRAAHW
Trigger: CCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGG...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CTGTCACCCAGGCATGATCTCGGCTCACTGGAACCTCCATCTTCCAGGCTCAAGAACAGACTCTGTTGCTaGCTGGAAATTTCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: LSPRHDLGSLEPPSSRLKNRLCC*LEISSE
Trigger: CTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTT...CTTGAGCCTGGAAGATGGAGGTTCCAGTGAGCCGAGATCATGCCTGGGTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR GCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGCTGGGAGGCGAAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRLGGEG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAACCTTCGCCTCCCAG...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324666.9
CDS-3UTR CCA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGTCAGGCACCAGAGACTaGTCCTGGTCATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKSGTRD*SWSSAS
Trigger: GCTGGCAGATGACCAGGACCAGTCTCTGGTGCCTGA...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTGGGTGGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGTCAGGCACCAGAGACTaGTCCTGGTCATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGGLVFNFLVLQGILHKLSGTRD*SWSSAS
Trigger: GCTGGCAGATGACCAGGACCAGTCTCTGGTGCCTGA...CAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAATGGTGCCTTCACCTTaGCCGCAGCCGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEMVPSP*PQPTAA
Trigger: GGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCAT...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAGGATTCCATTCATGTTaGCCACCACCTCGGTATCAT +
Preference number: 4 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELGFHSC*PPPRYH
Trigger: ATGATACCGAGGTGGTGGCCAACATGAATGGAATCC...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATTTCAGCCTGCTGTGTTaGGTAGGATGGGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: NFLVLQGILHKLATSQGDFSLLC*VGWGWT
Trigger: AGTCCACCCCCATCCTACCCAACACAGCAGGCTGAA...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGACATTCACAAGTGTTTaGAGCTTGTTCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SYNRRSLTHRLHAHELTATFTSV*SLFSLL
Trigger: CAGCAGGCTGAACAAGCTCCAAACACTTGTGAATGT...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGAGGCTGTCATTGCAGATaGTGTCAGTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRGCHCR*CQSRSF
Trigger: GAAGCTTCTGGACTGACACCATCTGCAATGACAGCC...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCCCTTGCAGTGCAGGGTGTGTaGGCTTCTCTGGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: FINCNKSSTLRWSTTLSLAVQGV*ASLGSR
Trigger: TCTTGAGCCCAGAGAAGCCCACACACCCTGCACTGC...AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGGCGTGGCAGGTGTaGAACAGTGTGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQRAWQV*NSVQRH
Trigger: GTGCCTTTGCACACTGTTCCACACCTGCCACGCCCT...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAATTGCTAGATGGAGGTaGAAGGGCTTCCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: EDLAGTTVPIRQHRATIEIARWR*KGFRSC
Trigger: ACAAGACCGGAAGCCCTTCCACCTCCATCTAGCAAT...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGATGACACTCTGAACTaGCTGTTGCTGGACTGCACT +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHDDTLN*LLLDCT
Trigger: AGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATC...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTACAAACCCAGGAGTTGTaGTTGCTGTTTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: LLASLHACCSLVWFRSYLQTQEL*LLFWGM
Trigger: CATTCCCCAAAACAGCAACCACAACTCCTGGGTTTG...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCTGGAGGTCGAGGTGCTaGAGCTGTGCTCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIWRSRC*SCAQSS
Trigger: GCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCA...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCCTCCTTCTGGTTGGTaGAGGTCGAGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIPPSGW*RSRCWS
Trigger: GCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGG...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGCCTCCTTCTGGTTGGTaGAGGTCGAGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMPPSGW*RSRCWS
Trigger: GCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGG...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACACCTCCTTCTGGTTGGTaGAGGTCGAGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATPPSGW*RSRCWS
Trigger: GCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGG...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCACTTGTTGGTGCAGCTaGAGGCCCGCCGTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESTCWCS*RPAVPK
Trigger: TTTGGGCACGGCGGGCCTCCAGCTGCACCAACAAGT...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505311.5
CDS-3UTR CCA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAATAATTTCTACTTGTTaGTGCAGCTGGAGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: EDLAGTTVPIRQHRATIEIISTC*CSWRPA
Trigger: GGCGGGCCTCCAGCTGCACCAACAAGTAGAAATTAT...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CCA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACGCTCCTCTTTCCTCTTaGTCAGCCGTAAGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHAPLSS*SAVSEA
Trigger: AGCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGC...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGAACGCGTGCTGCTCACTaGTTTGGTTTCGGAGCTATT +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRTRAAH*FGFGAI
Trigger: AATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCGGGGCAGTCTTTACTTaGCCTCTCCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SATCTLGDSRLWRTKEACGAVFT*PLLLLL
Trigger: AAGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCC...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCGCTGGCTCGCTGCTaGCCTTGCTGGTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAESLARC*PCWSAS
Trigger: TGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGA...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTATCAACTTCTCGGTCTaGGGTTTCAGGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSINFSV*GFRQHQ
Trigger: CTGGTGCTGCCTGAAACCCCAGACCGAGAAGTTGAT...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACAGGCAACGGAGCCACGTaGATGATGCAAACTCCTATC +
Preference number: 4 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTGNGAT*MMQTPI
Trigger: GATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCGGATCTTACACAAGCTaGCTACAAGTCAGGGGGATC +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRGSYTS*LQVRGI
Trigger: GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCC...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAGTAATTCTGGCGCTTTaGGAGGCTGAGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEVILAL*EAEVGR
Trigger: TCTGCCCACCTCAGCCTCCCAAAGCGCCAGAATTAC...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505311.5
CDS-3UTR TCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGACACGTGAGGATGTGTaGGAGACTGCAGTCATCGCA +
Preference number: 4 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRTREDV*ETAVIA
Trigger: TGCGATGACTGCAGTCTCTCACACATCCTCACGTGT...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACTGGTACTGCTTATCTaGGGAGACTCATCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQLVLLI*GDSSFR
Trigger: CCTGAAGGATGAGTCTCCTCAGATAAGCAGTACCAG...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCTGATGACGTGGCCATaGCAACTTTATTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNLMTWP*QLYLLP
Trigger: TGGAAGCAAATAAAGTTGTCATGGCCACGTCATCAG...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTTCTTGGATGACACTCTaGACTGGCTGTTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSSWMTL*TGCCWT
Trigger: AGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGA...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGGAGGTCTCTTGGATaGCACTCTGAACTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSRRSLG*HSELAV
Trigger: AACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCT...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACTCCTTGCTGATGCCATaGAACACGTCACCTACTGAA +
Preference number: 4 (lower is better)
Translates to: TELQSKESHAQTTRTRANSLLMP*NTSPTE
Trigger: TTCAGTAGGTGACGTGTTTCATGGCATCAGCAAGGA...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGTGCCTGGATGGGGAGTaGGAAGAGGTTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRCLDGE*EEVSGS
Trigger: AGAACCAGAAACCTCTTCTCACTCCCCATCCAGGCA...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTGTTGCTGCCTGGAAATGCCTGGATGGGGAGTaGGAAGAGGTTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: EPLWMFPELGTDSVAAWKCLDGE*EEVSGS
Trigger: AGAACCAGAAACCTCTTCTCACTCCCCATCCAGGCA...TTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCACCCTGGCCTGGGCTCTaGGTGGTTCATATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAPWPGL*VVHMPG
Trigger: TCCAGGCATATGAACCACTCAGAGCCCAGGCCAGGG...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCATTCTTGCCCTTTGGCTaGGGGGACTCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAFLPFG*GDSAST
Trigger: GGTGCTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAA...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCCAGTGCGGGCAAGTTaGTCTGAAGAAGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKPVRAS*SEEVAP
Trigger: CGGAGCCACTTCTTCAGAGCAACTTGCCCGCACTGG...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCCGGGACGATAACATGTaGCTCATGGTGTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRRDDNM*LMVSVK
Trigger: CTTCACAGACACCATGAGGCACATGTTATCGTCCCG...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATATCTTCTCCTGTAGTTaGAGTTGGGGCAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: NFLVLQGILHKLATSQGDIFSCS*SWGSRA
Trigger: TGCCCGACTGCCCCAACTGCAACTACAGGAGAAGAT...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAAGGATGTGTGAGAGACTaGAGTCATCGCAAGCACATC +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQGCVRD*SHRKHI
Trigger: GATGTGCTTGCGATGACTGCAGTCTCTCACACATCC...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGAACTACTGCTGGTACTaGTTATCTGAGGAGACTCAT +
Preference number: 4 (lower is better)
Translates to: SYNRRSLTHRLHAHELTANYCWY*LSEETH
Trigger: ATGAGTCTCCTCAGATAAGCAGTACCAGCAGTAGTT...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTGGGTGGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGTGGGGGTGGACTGTCTaGTTTGCTCTCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGGLVFNFLVLQGILHKLWGWTV*FALLCP
Trigger: AGGACAGAGGAGAGCAAAGCAGACAGTCCACCCCCA...CAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGGTGTGGAACAGTGTaGAAAGGCACATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSRCGTV*KGTCPW
Trigger: CCATGGACATGTGCCTTTGCACACTGTTCCACACCT...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACAGGACAGAAACTCTTaGGTGTGTCCACAAACCCAG +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQQDRNS*VCPQTQ
Trigger: CTGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTG...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACCAGGACAGAAACTCTTaGGTGTGTCCACAAACCCAG +
Preference number: 4 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHQDRNS*VCPQTQ
Trigger: CTGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTG...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAGCAGCTGTCCTCATCTaGACTCTCGTCCCCATCATC +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQAAVLI*TLVPII
Trigger: GATGATGGGGACGAGAGTGCAGATGAGGACAGCTGC...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTCGCTGCACGCGTGCTaGTCACTGGTTTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESSLHAC*SLVWFR
Trigger: CCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGCTTCCTTTGCTTATaGCTTGCTCGCTTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSSFLCL*LARFAA
Trigger: TGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCT...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGAACAGACTCTGTTGCTaGCTGGAAATTTCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: SYNRRSLTHRLHAHELTANRLCC*LEISSE
Trigger: CTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTT...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCAGGAACAGACTCTGTTaGTGCCTGGAAATTTCTAGT +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGRNRLC*CLEISS
Trigger: ACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCT...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGTCTGGTTCTTCAGTTTaGTCTAGTGAGCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRSGSSV*SSEPLW
Trigger: CCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGAGAGTGGCTCATGCTaGTTCCCATTCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ILHKLATSQGDQTQTAQRESGSC*FPFTSL
Trigger: CAAGGAGGTGAATGGGAAGCAGCATGAGCCACTCTC...ACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTGGCCTTGCTGGTCTaGCTCAGCTTCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRILALLV*LSFCLP
Trigger: TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAG...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGCTGCCAGCACCAGCTTaGTGTTCTGCTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKLPAPA*CSADAH
Trigger: GTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAG...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCTGGCTGAGGGGACTCTaGCAGCACCAGCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIWLRGL*QHQLAV
Trigger: AACAGCAAGCTGGTGCTGGCAGAGTCCCCTCAGCCA...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGTGGCTGAGGGGACTCTaGCAGCACCAGCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMWLRGL*QHQLAV
Trigger: AACAGCAAGCTGGTGCTGGCAGAGTCCCCTCAGCCA...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCTCAGGCACCAGAGACTaGTCCTGGTCATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRISGTRD*SWSSAS
Trigger: GCTGGCAGATGACCAGGACCAGTCTCTGGTGCCTGA...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGATCAGGCACCAGAGACTaGTCCTGGTCATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGSSVCSSEPLWMFPELGSGTRD*SWSSAS
Trigger: GCTGGCAGATGACCAGGACCAGTCTCTGGTGCCTGA...TCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAAGGAGGGAGATGAACTaGTGCGCTTGCGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLRREMN*CACGGP
Trigger: GGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCT...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCGCGTCGATCCTCTTCTaGCACTCCAGCCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSASILF*HSSHSS
Trigger: CGAGGAGTGGCTGGAGTGCCAGAAGAGGATCGACGC...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGTTGCAGATGACACACTaGGCGGGCTCCTCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKLQMTH*AGSSQQ
Trigger: TTGCTGAGAGGAGCCCGCCCAGTGTGTCATCTGCAA...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGATTCCATTCATGTTaGCCACCACCTCGGTATCAT +
Preference number: 4 (lower is better)
Translates to: EDLAGTTVPIRQHRATIEGFHSC*PPPRYH
Trigger: ATGATACCGAGGTGGTGGCCAACATGAATGGAATCC...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCCTGAGGAACTACTGCTaGTACTGCTTATCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRLRNYC*YCLSEE
Trigger: CTCCTCAGATAAGCAGTACCAGCAGTAGTTCCTCAG...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACGGCTGTCATTGCAGATaGTGTCAGTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHGCHCR*CQSRSF
Trigger: GAAGCTTCTGGACTGACACCATCTGCAATGACAGCC...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCGTGTGTGGGCTTCTCTaGGCTCAAGAACTGATGGCC +
Preference number: 4 (lower is better)
Translates to: AIYKLQQILHPPMVNDAFVCGLL*AQELMA
Trigger: GGCCATCAGTTCTTGAGCCCAGAGAAGCCCACACAC...GAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCGCAGTGCAGGGTGTGTaGGCTTCTCTGGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESAVQGV*ASLGSR
Trigger: TCTTGAGCCCAGAGAAGCCCACACACCCTGCACTGC...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGGGCGTGGCAGGTGTaGAACAGTGTGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATRAWQV*NSVQRH
Trigger: GTGCCTTTGCACACTGTTCCACACCTGCCACGCCCT...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCGTGGATGAGAGGGCGTaGCAGGTGTGGAACAGTGTG +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESVDERA*QVWNSV
Trigger: CACACTGTTCCACACCTGCCACGCCCTCTCATCCAC...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACATTGCTAGATGGAGGTaGAAGGGCTTCCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHIARWR*KGFRSC
Trigger: ACAAGACCGGAAGCCCTTCCACCTCCATCTAGCAAT...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCTTGCAAGGTGAGGTGTaGAGGCAGGTGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRILQGEV*RQVRAQ
Trigger: CTGCGCTCTCACCTGCCTCCACACCTCACCTTGCAA...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAACCCATCATCCTGCTGTaGGTCGTAGACACCATTCTC +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEPIILL*VVDTIL
Trigger: GAGAATGGTGTCTACGACCCACAGCAGGATGATGGG...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCATGGAGGTCGAGGTGCTaGAGCTGTGCTCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAWRSRC*SCAQSS
Trigger: GCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCA...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGTGCCCTCCTTCTGGTTaGTGGAGGTCGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VFNFLVLQGILHKLATSQCPPSG*WRSRCW
Trigger: CCAGCACCTCGACCTCCACCAACCAGAAGGAGGGCA...CTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCTGCCCTCCTTCTGGTTaGTGGAGGTCGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSCPPSG*WRSRCW
Trigger: CCAGCACCTCGACCTCCACCAACCAGAAGGAGGGCA...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505311.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAGCTCCTCTTTCCTCTTaGTCAGCCGTAAGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEAPLSS*SAVSEA
Trigger: AGCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGC...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGGGCAGTCTTTACTTaGCCTCTCCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TELQSKESHAQTTRTRANGAVFT*PLLLLL
Trigger: AAGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCC...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATGACTCTGTTGCTGCCTaGAAATTTCTAGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNDSVAA*KFLVSM
Trigger: CATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTC...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTGGAGTCTCTGGTGTCGGACTCTGTTGCTGCCTaGAAATTTCTAGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: CCFPFTSLGRRNLESLVSDSVAA*KFLVSM
Trigger: CATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTC...CGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACAAGTGGTTCATATGCCTaGATGGGGAGTGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTSGSYA*MGSEKR
Trigger: CCTCTTCTCACTCCCCATCCAGGCATATGAACCACT...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCACCCCTAGCCCTGGCCTaGGCTCTGAGTGGTTCATAT +
Preference number: 4 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPPLALA*ALSGSY
Trigger: ATATGAACCACTCAGAGCCCAGGCCAGGGCTAGGGG...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTATGTGGGCCTCCTCGCTaGCTCGCTGCTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLCGPPR*LAAGLA
Trigger: AGCAAGGCCAGCAGCGAGCCAGCGAGGAGGCCCACA...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCAGGAGTCCTCATTCAGTaGGCAGCAAAGGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: ELLFQSDSTELQSKESHAGVLIQ*AAKVAF
Trigger: AAAAGCCACCTTTGCTGCCCACTGAATGAGGACTCC...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTGGATCTTACACAAGCTaGCTACAAGTCAGGGGGATC +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSGSYTS*LQVRGI
Trigger: GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCC...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
3UTR CAA 72 bp CTTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTaGGTTTCGGAGCTATTTATAAACTGCAACAAATCC +
Preference number: 4 (lower is better)
Translates to: LARFAARVLLTG*VSELFINCNKS
Trigger: GGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACACGTGTAGCGCACTTCTaGCCAGTAGTTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATRVAHF*PVVLQL
Trigger: CAGCTGCAGAACTACTGGTCAGAAGTGCGCTACACG...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACACACGTGAGGATGTGTaGGAGACTGCAGTCATCGCA +
Preference number: 4 (lower is better)
Translates to: FGAIYKLQQILHPPMVNDTREDV*ETAVIA
Trigger: TGCGATGACTGCAGTCTCTCACACATCCTCACGTGT...GTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGCCTGGGGTGCTGCTaGATTGTGATGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSSLGCC*IVMGEL
Trigger: CAGCTCTCCCATCACAATTCAGCAGCACCCCAGGCT...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGGCAAGATTTGCAAGGTaGGGTGTGGAGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKARFAR*GVEAGE
Trigger: CTCACCTGCCTCCACACCTCACCTTGCAAATCTTGC...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGCTGAAATTCCTCCTTaGAACGATCCTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETAEIPP*NDPPLL
Trigger: AAGAAGAGGAGGATCGTTTCAAGGAGGAATTTCAGC...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACATAGGGGTTGGGTTTaGCTTTTCGTCCTTGATGTG +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQHRGWV*LFVLDV
Trigger: CACATCAAGGACGAAAAGTCAAACCCAACCCCTATG...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAAGCTTGCTGTTCTGCTaGTGCTCACCGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAESLLFC*CSPGEV
Trigger: CACCTCTCCCGGTGAGCATCAGCAGAACAGCAAGCT...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp ATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTACAGACTTGATGGTGTaGGTACTGGGTGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: ILHKLATSQGDQTQTAQRTDLMV*VLGGLV
Trigger: AACAAGCCCACCCAGTACTCACACCATCAAGTCTGT...ACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATAACAGGTGTTTATTATaGAGTTCCCACGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNNRCLL*SSHVTW
Trigger: CCAAGTGACGTGGGAACTGCATAATAAACACCTGTT...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAATGTATGTGTCCTCACTaGAGGTGTCGTGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQCMCPH*RCRVWW
Trigger: CCACCACACACGACACCTGCAGTGAGGACACATACA...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAACGGGACGATAACATGTaGCTCATGGTGTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAERDDNM*LMVSVK
Trigger: CTTCACAGACACCATGAGGCACATGTTATCGTCCCG...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp ATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGGATGTGTGAGAGACTaGAGTCATCGCAAGCACATC +
Preference number: 4 (lower is better)
Translates to: ILHKLATSQGDQTQTAQRGCVRD*SHRKHI
Trigger: GATGTGCTTGCGATGACTGCAGTCTCTCACACATCC...ACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAACTGTCCTGGGGCTCCTaGTTCCCAGCACTCCATCTT +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAELSWGS*FPALHL
Trigger: AAGATGGAGTGCTGGGAAGCAGGAGCCCCAGGACAG...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACATGGGGGTGGACTGTCTaGTTTGCTCTCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATWGWTV*FALLCP
Trigger: AGGACAGAGGAGAGCAAAGCAGACAGTCCACCCCCA...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCAGGGTAAAGGTGCAGTaGAGGGTGTGTGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIRVKVQ*RVCGLL
Trigger: GAGAAGCCCACACACCCTGCACTGCACCTTTACCCT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATAGGTGTGGAACAGTGTaGAAAGGCACATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: NFLVLQGILHKLATSQGDRCGTV*KGTCPW
Trigger: CCATGGACATGTGCCTTTGCACACTGTTCCACACCT...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAAGGTGTGGAACAGTGTaGAAAGGCACATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAERCGTV*KGTCPW
Trigger: CCATGGACATGTGCCTTTGCACACTGTTCCACACCT...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGTGGCTGTTGCTGGACTaGACTGTGGTAGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKWLLLD*TVVAVQ
Trigger: CTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCA...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCTGGCTGTTGCTGGACTaGACTGTGGTAGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQIWLLLD*TVVAVQ
Trigger: CTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCA...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCATGGGGCTGCAAGATTTaGAAGGTGAGGTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPWGCKI*KVRCGG
Trigger: GCCTCCACACCTCACCTTGCAAATCTTGCAGCCCCA...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGCAGGACAGAAACTCTTaGGTGTGTCCACAAACCCAG +
Preference number: 4 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRQDRNS*VCPQTQ
Trigger: CTGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTG...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCGCAGCTGTCCTCATCTaGACTCTCGTCCCCATCATC +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESAAVLI*TLVPII
Trigger: GATGATGGGGACGAGAGTGCAGATGAGGACAGCTGC...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCGCAGCTGTCCTCATCTaGACTCTCGTCCCCATCATC +
Preference number: 4 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQIAAVLI*TLVPII
Trigger: GATGATGGGGACGAGAGTGCAGATGAGGACAGCTGC...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGGAGCTATTTATAAACTaGAACAAATCCTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: SYNRRSLTHRLHAHELTAELFIN*NKSSTL
Trigger: GAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTC...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAGCTTCGCTGCACGCGTaGTGCTCACTGGTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATASLHA*CSLVWF
Trigger: AAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGC...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGGCTTCGCTGCACGCGTaGTGCTCACTGGTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKASLHA*CSLVWF
Trigger: AAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGC...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TCTAGCAGAATCCAAGCAGAACCTTTTGAAATATTCCACTTCCCTCTCTGTCTCCTGGCCTTGCTGGTCTaGCTCAGCTTCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSRIQAEPFEIFHFPLCLLALLV*LSFCLP
Trigger: TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAG...GAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACCTCTCCTCTCTTTTCTaGTCTGTGATGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHLSSLF*SVMDMR
Trigger: CCTCATGTCCATCACAGAGCAGAAAAGAGAGGAGAG...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTGCCAGCACCAGCTTaGTGTTCTGCTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRILPAPA*CSADAH
Trigger: GTGAGCATCAGCAGAACAGCAAGCTGGTGCTGGCAG...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAACCAGAGACTGGTCCTaGTCATCTGCCAGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAETRDWS*SSASGV
Trigger: AACCCCGCTGGCAGATGACCAGGACCAGTCTCTGGT...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAATGGTGCCTTCACCTTaGCCGCAGCCGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLMVPSP*PQPTAA
Trigger: GGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCAT...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCAGTTCCCACGTCACTTaGAACTTTTTCAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: ELQSKESHAQTTRTRANGSSHVT*NFFKCS
Trigger: TGAACACTTGAAAAAGTTCCAAGTGACGTGGGAACT...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGTCCTCCTCGGAACGCTaGTACCTCTGCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKSSSER*YLCSKV
Trigger: TACCTTGCTGCAGAGGTACCAGCGTTCCGAGGAGGA...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCATCCTCCTCGGAACGCTaGTACCTCTGCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPSSSER*YLCSKV
Trigger: TACCTTGCTGCAGAGGTACCAGCGTTCCGAGGAGGA...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACATCCTCCTCGGAACGCTaGTACCTCTGCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATSSSER*YLCSKV
Trigger: TACCTTGCTGCAGAGGTACCAGCGTTCCGAGGAGGA...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCTCCTGTAGTTGCAGTTaGGGCAGTCGGGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRISCSCS*GSRACS
Trigger: TGAGCATGCCCGACTGCCCCAACTGCAACTACAGGA...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGTCCTGTAGTTGCAGTTaGGGCAGTCGGGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMSCSCS*GSRACS
Trigger: TGAGCATGCCCGACTGCCCCAACTGCAACTACAGGA...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGGATCCACTTGAAGTaGGAGCTGGTGAATGTGGAT +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSRIHLK*ELVNVD
Trigger: ATCCACATTCACCAGCTCCCACTTCAAGTGGATCCT...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCAAGGATCCACTTGAAGTaGGAGCTGGTGAATGTGGAT +
Preference number: 4 (lower is better)
Translates to: ELLFQSDSTELQSKESHARIHLK*ELVNVD
Trigger: ATCCACATTCACCAGCTCCCACTTCAAGTGGATCCT...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTTGCAGATGACACACTaGGCGGGCTCCTCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESLQMTH*AGSSQQ
Trigger: TTGCTGAGAGGAGCCCGCCCAGTGTGTCATCTGCAA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTTTGCAGATGACACACTaGGCGGGCTCCTCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SVCSSEPLWMFPELGTDSLQMTH*AGSSQQ
Trigger: TTGCTGAGAGGAGCCCGCCCAGTGTGTCATCTGCAA...AGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGGGCGTGGCAGGTGTaGAACAGTGTGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSRAWQV*NSVQRH
Trigger: GTGCCTTTGCACACTGTTCCACACCTGCCACGCCCT...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAATTGCTAGATGGAGGTaGAAGGGCTTCCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEIARWR*KGFRSC
Trigger: ACAAGACCGGAAGCCCTTCCACCTCCATCTAGCAAT...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCTTGTGGTTGCTGTTTTaGGGAATGATGGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRLWLLF*GMMGLQ
Trigger: TTGCAGCCCCATCATTCCCCAAAACAGCAACCACAA...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCCAAACCCAGGAGTTGTaGTTGCTGTTTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRQTQEL*LLFWGM
Trigger: CATTCCCCAAAACAGCAACCACAACTCCTGGGTTTG...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCCCTTCCCATCATCCTGCTGTaGGTCGTAGACACCATTCTC +
Preference number: 4 (lower is better)
Translates to: FINCNKSSTLRWSTTLSLPIILL*VVDTIL
Trigger: GAGAATGGTGTCTACGACCCACAGCAGGATGATGGG...AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGCCCATCATCCTGCTGTaGGTCGTAGACACCATTCTC +
Preference number: 4 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKPIILL*VVDTIL
Trigger: GAGAATGGTGTCTACGACCCACAGCAGGATGATGGG...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTACTTGCCCTCCTTCTaGTTGGTGGAGGTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESYLPSF*LVEVEV
Trigger: CACCTCGACCTCCACCAACCAGAAGGAGGGCAAGTA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505311.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGTCCTCCACCCTCCGATaGTCAACGACGCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMSSTLR*STTLSL
Trigger: AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGA...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATACGCGTGCTGCTCACTaGTTTGGTTTCGGAGCTATT +
Preference number: 4 (lower is better)
Translates to: NFLVLQGILHKLATSQGDTRAAH*FGFGAI
Trigger: AATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCGGGGCAGTCTTTACTTaGCCTCTCCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGIGAVFT*PLLLLL
Trigger: AAGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCC...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCAGGGGCAGTCTTTACTTaGCCTCTCCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ELLFQSDSTELQSKESHAGAVFT*PLLLLL
Trigger: AAGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCC...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGACTCTGTTGCTGCCTaGAAATTTCTAGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: EDLAGTTVPIRQHRATIEDSVAA*KFLVSM
Trigger: CATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTC...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAACCCCTAGCCCTGGCCTaGGCTCTGAGTGGTTCATAT +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEPLALA*ALSGSY
Trigger: ATATGAACCACTCAGAGCCCAGGCCAGGGCTAGGGG...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCTCCCATTCACCTCCTTaGGGAGGAGAAATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGISHSPP*GGEIWS
Trigger: ACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGA...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCCATTTCCTTCTTTATaGTGCTGCATGATGTCGAAG +
Preference number: 4 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNPFPSL*CCMMSK
Trigger: CTTCGACATCATGCAGCACCATAAAGAAGGAAATGG...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCCTTGTTCTTGCCCTTTaGCTGAGGGGACTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESLVLAL*LRGLCQ
Trigger: CTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAG...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTTGTTCTTGCCCTTTaGCTGAGGGGACTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQILVLAL*LRGLCQ
Trigger: CTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAG...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGACTTGTTCTTGCCCTTTaGCTGAGGGGACTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SGSSVCSSEPLWMFPELGLVLAL*LRGLCQ
Trigger: CTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAG...TCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCGGCAACGGAGCCACGTaGATGATGCAAACTCCTATC +
Preference number: 4 (lower is better)
Translates to: AIYKLQQILHPPMVNDAFGNGAT*MMQTPI
Trigger: GATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC...GAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR CCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAAGTTCGAGACCAGCCTaGGCAATGTGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLASSRPA*AMWRNP
Trigger: GGGGTTTCGCCACATTGCCCAGGCTGGTCTCGAACT...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505311.5
CDS-3UTR TCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAGCGGGCAAGTTGCTCTaGAGAAGTGGCTCCGAAAAG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEAGKLL*RSGSEK
Trigger: CTTTTCGGAGCCACTTCTTCAGAGCAACTTGCCCGC...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGACACGTGAGGATGTGTaGGAGACTGCAGTCATCGCA +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKTREDV*ETAVIA
Trigger: TGCGATGACTGCAGTCTCTCACACATCCTCACGTGT...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCACACGTGAGGATGTGTaGGAGACTGCAGTCATCGCA +
Preference number: 4 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQITREDV*ETAVIA
Trigger: TGCGATGACTGCAGTCTCTCACACATCCTCACGTGT...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCGGTGCTGCTGAATTGTaGTGGGAGAGCTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SSISTLSRSISLGRKTSSGAAEL*WESWSR
Trigger: CCGGCTCCAGCTCTCCCATCACAATTCAGCAGCACC...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR TCA 90 bp CTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGTTCATCATCAGCTTCTaGGGAACTACTGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: LRCTRAAHWFGFGAIYKLFIISF*GTTAGT
Trigger: AGTACCAGCAGTAGTTCCTCAGAAGCTGATGATGAA...CAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTGTGGTCCTCCTTGCTaGTGCCATGAAACACGTCAC +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESCGPPC*CHETRH
Trigger: GTGACGTGTTTCATGGCATCAGCAAGGAGGACCACA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCTGTGGTCCTCCTTGCTaGTGCCATGAAACACGTCAC +
Preference number: 4 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQICGPPC*CHETRH
Trigger: GTGACGTGTTTCATGGCATCAGCAAGGAGGACCACA...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCTGCCTGGATGGGGAGTaGGAAGAGGTTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRICLDGE*EEVSGS
Trigger: AGAACCAGAAACCTCTTCTCACTCCCCATCCAGGCA...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACTTGACTTTTCGTCCTTaGTGTGGTTCAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHLTFRP*CGSAAF
Trigger: AAAAGCAGCTGAACCACATCAAGGACGAAAAGTCAA...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGCATAGGGGTTGGGTTTaGCTTTTCGTCCTTGATGTG +
Preference number: 4 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRHRGWV*LFVLDV
Trigger: CACATCAAGGACGAAAAGTCAAACCCAACCCCTATG...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTATTCTTGCCCTTTGGCTaGGGGGACTCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLFLPFG*GDSAST
Trigger: GGTGCTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAA...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACCCAAGCAGAACCTTTTaGAATATTCCACTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TELQSKESHAQTTRTRANPSRTF*NIPLPS
Trigger: AGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGG...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAATTCCCGGTCCGCCTCTaGCGAAATTTCTTCATATGG +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQFPVRL*RNFFIW
Trigger: CCATATGAAGAAATTTCGGCAGAGGCGGACCGGGAA...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
CDS-3UTR GCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGAAACAGGTGTTTATTATaGAGTTCCCACGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRNRCLL*SSHVTW
Trigger: CCAAGTGACGTGGGAACTGCATAATAAACACCTGTT...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTGTATGTGTCCTCACTaGAGGTGTCGTGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESCMCPH*RCRVWW
Trigger: CCACCACACACGACACCTGCAGTGAGGACACATACA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGATGTATGTGTCCTCACTaGAGGTGTCGTGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGSSVCSSEPLWMFPELGCMCPH*RCRVWW
Trigger: CCACCACACACGACACCTGCAGTGAGGACACATACA...TCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGAACGCTGGTACCTCTaGAGCAAGGTACTGTATGTG +
Preference number: 4 (lower is better)
Translates to: FGAIYKLQQILHPPMVNDERWYL*SKVLYV
Trigger: CACATACAGTACCTTGCTGCAGAGGTACCAGCGTTC...GTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAGAACGCTGGTACCTCTaGAGCAAGGTACTGTATGTG +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQERWYL*SKVLYV
Trigger: CACATACAGTACCTTGCTGCAGAGGTACCAGCGTTC...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCATCTTCTCCTGTAGTTaGAGTTGGGGCAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIIFSCS*SWGSRA
Trigger: TGCCCGACTGCCCCAACTGCAACTACAGGAGAAGAT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCGGATGTGTGAGAGACTaGAGTCATCGCAAGCACATC +
Preference number: 4 (lower is better)
Translates to: AIYKLQQILHPPMVNDAFGCVRD*SHRKHI
Trigger: GATGTGCTTGCGATGACTGCAGTCTCTCACACATCC...GAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TGGAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTTGGCCTCTCCACTACAAAAAGTTGGTaGCGAGCCACTGTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: WKFLVSMSNLGQSLLGLSTTKSW*RATVCE
Trigger: CTCACAGACAGTGGCTCGGCACCAACTTTTTGTAGT...GGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAAACTACTGCTGGTACTaGTTATCTGAGGAGACTCAT +
Preference number: 4 (lower is better)
Translates to: EDLAGTTVPIRQHRATIENYCWY*LSEETH
Trigger: ATGAGTCTCCTCAGATAAGCAGTACCAGCAGTAGTT...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATGGGGCTGCAAGATTTaGAAGGTGAGGTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEWGCKI*KVRCGG
Trigger: GCCTCCACACCTCACCTTGCAAATCTTGCAGCCCCA...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTACCATTCTCGCAGCGGTaGCCTTCGCAGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLPFSQR*PSQSGS
Trigger: TGACCCTGACTGCGAAGGGCACCGCTGCGAGAATGG...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTATGGTGGAGGTCGAGGTaGTGGAGCTGTGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLWWRSR*WSCAQS
Trigger: GCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCA...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCGAGCTATTTATAAACTaGAACAAATCCTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: SATCTLGDSRLWRTKEACELFIN*NKSSTL
Trigger: GAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTC...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAACCTTTGCTTATGCCTTaGTCGCTTCGCTGCACGCGT +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEPLLMP*SLRCTR
Trigger: ACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGG...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACAGGAACAGACTCTGTTaGTGCCTGGAAATTTCTAGT +
Preference number: 4 (lower is better)
Translates to: RELLFQSDSTELQSKESHRNRLC*CLEISS
Trigger: ACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCT...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAATCTGGTTCTTCAGTTTaGTCTAGTGAGCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQSGSSV*SSEPLW
Trigger: CCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGGAGAGTGGCTCATGCTaGTTCCCATTCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKESGSC*FPFTSL
Trigger: CAAGGAGGTGAATGGGAAGCAGCATGAGCCACTCTC...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGATATTTTTCTTGTTCTTaGCCTTTGGCTGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRYFSCS*PLAEGT
Trigger: AGTCCCCTCAGCCAAAGGGCAAGAACAAGAAAAATA...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCTTAACTTTCTCGTTCTaGAAGGGATCTTACACAAGC +
Preference number: 4 (lower is better)
Translates to: SATCTLGDSRLWRTKEACLTFSF*KGSYTS
Trigger: GCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAA...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCAGTTCCCACGTCACTTaGAACTTTTTCAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SATCTLGDSRLWRTKEACSSHVT*NFFKCS
Trigger: TGAACACTTGAAAAAGTTCCAAGTGACGTGGGAACT...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCTCCTCCTCGGAACGCTaGTACCTCTGCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSSSSER*YLCSKV
Trigger: TACCTTGCTGCAGAGGTACCAGCGTTCCGAGGAGGA...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCGTCGATCCTCTTCTaGCACTCCAGCCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLASILF*HSSHSS
Trigger: CGAGGAGTGGCTGGAGTGCCAGAAGAGGATCGACGC...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTGGAGTCTCTGGTGTCGTTAACATGCGCTGCTTaGTTTTCATTGTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: CCFPFTSLGRRNLESLVSLTCAA*FSLSSA
Trigger: AGCAGATGACAATGAAAACCAAGCAGCGCATGTTAA...CGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCATTGCAGATGACACACTaGGCGGGCTCCTCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLALQMTH*AGSSQQ
Trigger: TTGCTGAGAGGAGCCCGCCCAGTGTGTCATCTGCAA...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACAATCACTACAAAAAGTTaGTGCCGAGCCACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTITTKS*CRATVC
Trigger: ACAGACAGTGGCTCGGCACCAACTTTTTGTAGTGAT...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAACTGAGGAACTACTGCTaGTACTGCTTATCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAELRNYC*YCLSEE
Trigger: CTCCTCAGATAAGCAGTACCAGCAGTAGTTCCTCAG...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCTGAGGAACTACTGCTaGTACTGCTTATCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: NFLVLQGILHKLATSQGDLRNYC*YCLSEE
Trigger: CTCCTCAGATAAGCAGTACCAGCAGTAGTTCCTCAG...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGACTGTGTTGGGTAGGATaGGGGTGGACTGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SGSSVCSSEPLWMFPELGLCWVG*GWTVCF
Trigger: AAAGCAGACAGTCCACCCCCATCCTACCCAACACAG...TCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAAACATTCACAAGTGTTTaGAGCTTGTTCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQTFTSV*SLFSLL
Trigger: CAGCAGGCTGAACAAGCTCCAAACACTTGTGAATGT...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCGTGTGTGGGCTTCTCTaGGCTCAAGAACTGATGGCC +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSVCGLL*AQELMA
Trigger: GGCCATCAGTTCTTGAGCCCAGAGAAGCCCACACAC...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCCCTTATTGCTAGATGGAGGTaGAAGGGCTTCCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: FINCNKSSTLRWSTTLSLIARWR*KGFRSC
Trigger: ACAAGACCGGAAGCCCTTCCACCTCCATCTAGCAAT...AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAATTGTGGTTGCTGTTTTaGGGAATGATGGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAELWLLF*GMMGLQ
Trigger: TTGCAGCCCCATCATTCCCCAAAACAGCAACCACAA...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAATAATTTCTACTTGTTaGTGCAGCTGGAGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQIISTC*CSWRPA
Trigger: GGCGGGCCTCCAGCTGCACCAACAAGTAGAAATTAT...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CCA 90 bp TCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTGCTCCTCTTTCCTCTTaGTCAGCCGTAAGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: SVCSSEPLWMFPELGTDSAPLSS*SAVSEA
Trigger: AGCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGC...AGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGCTCCTCTTTCCTCTTaGTCAGCCGTAAGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPAPLSS*SAVSEA
Trigger: AGCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGC...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCATCCTCCACCCTCCGATaGTCAACGACGCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLASSTLR*STTLSL
Trigger: AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGA...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCGACTCTGTTGCTGCCTaGAAATTTCTAGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRDSVAA*KFLVSM
Trigger: CATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTC...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGTGGTTCATATGCCTaGATGGGGAGTGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQSGSYA*MGSEKR
Trigger: CCTCTTCTCACTCCCCATCCAGGCATATGAACCACT...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCGAAATTTGGAGTCTCTaGTGTCGACGGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESEIWSL*CRRGLQ
Trigger: CTGCAGACCCCGTCGACACCAGAGACTCCAAATTTC...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGAAATTTGGAGTCTCTaGTGTCGACGGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMEIWSL*CRRGLQ
Trigger: CTGCAGACCCCGTCGACACCAGAGACTCCAAATTTC...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCTGGGGAGGAGAAATTTaGAGTCTCTGGTGTCGACGG +
Preference number: 4 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQIWGGEI*SLWCRR
Trigger: CCGTCGACACCAGAGACTCCAAATTTCTCCTCCCCA...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAATCCCATTCACCTCCTTaGGGAGGAGAAATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAESHSPP*GGEIWS
Trigger: ACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGA...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGGAGTCCTCATTCAGTaGGCAGCAAAGGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: FGAIYKLQQILHPPMVNDGVLIQ*AAKVAF
Trigger: AAAAGCCACCTTTGCTGCCCACTGAATGAGGACTCC...GTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAATCAACTTCTCGGTCTaGGGTTTCAGGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPINFSV*GFRQHQ
Trigger: CTGGTGCTGCCTGAAACCCCAGACCGAGAAGTTGAT...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR CCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAGGCAACGGAGCCACGTaGATGATGCAAACTCCTATC +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATGNGAT*MMQTPI
Trigger: GATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp CTGGGTGGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGGATCTTACACAAGCTaGCTACAAGTCAGGGGGATC +
Preference number: 4 (lower is better)
Translates to: LGGLVFNFLVLQGILHKLGSYTS*LQVRGI
Trigger: GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCC...CAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACATAATTTCTACTTGTTaGTGCAGCTGGAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHIISTC*CSWRPP
Trigger: AGGAGGCCTCCAGCTGCACCAACAAGTAGAAATTAT...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR TCA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATTTCATCATCAGCTTCTaGGGAACTACTGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: NFLVLQGILHKLATSQGDFIISF*GTTAGT
Trigger: AGTACCAGCAGTAGTTCCTCAGAAGCTGATGATGAA...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAATTCATCATCAGCTTCTaGGGAACTACTGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEFIISF*GTTAGT
Trigger: AGTACCAGCAGTAGTTCCTCAGAAGCTGATGATGAA...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTGTTGCTGCCTGGAAATTCATCATCAGCTTCTaGGGAACTACTGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: EPLWMFPELGTDSVAAWKFIISF*GTTAGT
Trigger: AGTACCAGCAGTAGTTCCTCAGAAGCTGATGATGAA...TTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACTCCTGCTTACAAACATaGCATTCACAAGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: TELQSKESHAQTTRTRANSCLQT*HSQVFG
Trigger: TCCAAACACTTGTGAATGTCATGTTTGTAAGCAGGA...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTACTTGAAGAGATGCATTaGATACCTGATGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELLEEMH*IPDAYL
Trigger: CAAATAAGCATCAGGTATTCAATGCATCTCTTCAAG...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTCTTGGATGACACTCTaGACTGGCTGTTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESSWMTL*TGCCWT
Trigger: AGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTAGGAGGTCTCTTGGATaGCACTCTGAACTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SVCSSEPLWMFPELGTDSRRSLG*HSELAV
Trigger: AACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCT...AGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCTCCTTGCTGATGCCATaGAACACGTCACCTACTGAA +
Preference number: 4 (lower is better)
Translates to: AIYKLQQILHPPMVNDAFSLLMP*NTSPTE
Trigger: TTCAGTAGGTGACGTGTTTCATGGCATCAGCAAGGA...GAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TCTAGCAGAATCCAAGCAGAACCTTTTGAAATATTCCACTTCCCTCTCTGTCTCTGTGGTCCTCCTTGCTaGTGCCATGAAACACGTCAC +
Preference number: 4 (lower is better)
Translates to: SSRIQAEPFEIFHFPLCLCGPPC*CHETRH
Trigger: GTGACGTGTTTCATGGCATCAGCAAGGAGGACCACA...GAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCTTGACTTTTCGTCCTTaGTGTGGTTCAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGILTFRP*CGSAAF
Trigger: AAAAGCAGCTGAACCACATCAAGGACGAAAAGTCAA...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTACATCAATTGAATTGTTaGCTCTGTCTCCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLASLHACCSLVWFRSYLHQLNC*LCLLSS
Trigger: AGAAGAAAGGAGACAGAGTCAACAATTCAATTGATG...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR TCA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTACATCAATTGAATTGTTaGCTCTGTCTCCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELHQLNC*LCLLSS
Trigger: AGAAGAAAGGAGACAGAGTCAACAATTCAATTGATG...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCCGAAACTCCATCAATTaGATTGTTGACTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGIRNSIN*IVDSVS
Trigger: GGAGACAGAGTCAACAATTCAATTGATGGAGTTTCG...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324666.9
CDS-3UTR TCA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACACCAAGCAGAACCTTTTaGAATATTCCACTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTPSRTF*NIPLPS
Trigger: AGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGG...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTCCAAGCAGAACCTTTTaGAATATTCCACTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSPSRTF*NIPLPS
Trigger: AGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGG...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACCAAGCAGAACCTTTTaGAATATTCCACTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ELLFQSDSTELQSKESHAPSRTF*NIPLPS
Trigger: AGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGG...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTAAAGACATCATCCATATaGCATCCAGAGATTTCATCA +
Preference number: 4 (lower is better)
Translates to: LLASLHACCSLVWFRSYLKTSSI*HPEISS
Trigger: TGATGAAATCTCTGGATGTCATATGGATGATGTCTT...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR GCA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGCGTCCAGCTCCAATATaGAGGTCTGCATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKRPAPI*RSACHC
Trigger: ACAATGACATGCAGACCTGCATATTGGAGCTGGACG...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
CDS-3UTR GCA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAAAACAGGTGTTTATTATaGAGTTCCCACGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: GILHKLATSQGDQTQTAQNRCLL*SSHVTW
Trigger: CCAAGTGACGTGGGAACTGCATAATAAACACCTGTT...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCCGGGACGATAACATGTaGCTCATGGTGTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESRDDNM*LMVSVK
Trigger: CTTCACAGACACCATGAGGCACATGTTATCGTCCCG...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGGGATGTGTGAGAGACTaGAGTCATCGCAAGCACATC +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKGCVRD*SHRKHI
Trigger: GATGTGCTTGCGATGACTGCAGTCTCTCACACATCC...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAAACTACTGCTGGTACTaGTTATCTGAGGAGACTCAT +
Preference number: 4 (lower is better)
Translates to: RDLTQAGYKSGGSNTNSANYCWY*LSEETH
Trigger: ATGAGTCTCCTCAGATAAGCAGTACCAGCAGTAGTT...TGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTCAGGACAGAAACTCTTaGGTGTGTCCACAAACCCAG +
Preference number: 4 (lower is better)
Translates to: SVCSSEPLWMFPELGTDSQDRNS*VCPQTQ
Trigger: CTGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTG...AGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCAGCTTCCTTTGCTTATaGCTTGCTCGCTTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRISFLCL*LARFAA
Trigger: TGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACAACAGACTCTGTTGCTaGCTGGAAATTTCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHNRLCC*LEISSE
Trigger: CTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTT...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGGAACAGACTCTGTTaGTGCCTGGAAATTTCTAGT +
Preference number: 4 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSRNRLC*CLEISS
Trigger: ACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCT...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGTCTGGTTCTTCAGTTTaGTCTAGTGAGCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRSGSSV*SSEPLW
Trigger: CCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAGAGAGTGGCTCATGCTaGTTCCCATTCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEESGSC*FPFTSL
Trigger: CAAGGAGGTGAATGGGAAGCAGCATGAGCCACTCTC...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTATTTCCTTCTTTATGGTaGTGCATGATGTCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELFPSLW*CMMSKK
Trigger: TTTCTTCGACATCATGCAGCACCATAAAGAAGGAAA...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp CTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGTATTTTTCTTGTTCTTaGCCTTTGGCTGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: LRCTRAAHWFGFGAIYKLYFSCS*PLAEGT
Trigger: AGTCCCCTCAGCCAAAGGGCAAGAACAAGAAAAATA...CAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCAGCTGGGATCAAACGTaGACACCACCATGCCAATTG +
Preference number: 4 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQISWDQT*TPPCQL
Trigger: CAATTGGCATGGTGGTGTGCACGTTTGATCCCAGCT...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CCA 90 bp TGGAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTTGGCCTCTCCGTTGCTCTGAAGAAGTaGCTCCGAAAAGACCAGATT +
Preference number: 4 (lower is better)
Translates to: WKFLVSMSNLGQSLLGLSVALKK*LRKDQI
Trigger: AATCTGGTCTTTTCGGAGCCACTTCTTCAGAGCAAC...GGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGATTAACATGCGCTGCTTaGTTTTCATTGTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRLTCAA*FSLSSA
Trigger: AGCAGATGACAATGAAAACCAAGCAGCGCATGTTAA...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCCCTTGGATTCCATTCATGTTaGCCACCACCTCGGTATCAT +
Preference number: 4 (lower is better)
Translates to: FINCNKSSTLRWSTTLSLGFHSC*PPPRYH
Trigger: ATGATACCGAGGTGGTGGCCAACATGAATGGAATCC...AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGGGCTGTCATTGCAGATaGTGTCAGTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKGCHCR*CQSRSF
Trigger: GAAGCTTCTGGACTGACACCATCTGCAATGACAGCC...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCATTGCTAGATGGAGGTaGAAGGGCTTCCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIIARWR*KGFRSC
Trigger: ACAAGACCGGAAGCCCTTCCACCTCCATCTAGCAAT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGTTGTGGTTGCTGTTTTaGGGAATGATGGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKLWLLF*GMMGLQ
Trigger: TTGCAGCCCCATCATTCCCCAAAACAGCAACCACAA...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TCTAGCAGAATCCAAGCAGAACCTTTTGAAATATTCCACTTCCCTCTCTGTCTCCCCATCATCCTGCTGTaGGTCGTAGACACCATTCTC +
Preference number: 4 (lower is better)
Translates to: SSRIQAEPFEIFHFPLCLPIILL*VVDTIL
Trigger: GAGAATGGTGTCTACGACCCACAGCAGGATGATGGG...GAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCATAATTTCTACTTGTTaGTGCAGCTGGAGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESIISTC*CSWRPA
Trigger: GGCGGGCCTCCAGCTGCACCAACAAGTAGAAATTAT...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505311.5
CDS-3UTR CCA 90 bp GCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCGGGGCAGTCTTTACTTaGCCTCTCCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: AIYKLQQILHPPMVNDAFGAVFT*PLLLLL
Trigger: AAGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCC...GAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCTGGGGAGGAGAAATTTaGAGTCTCTGGTGTCGACGG +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSWGGEI*SLWCRR
Trigger: CCGTCGACACCAGAGACTCCAAATTTCTCCTCCCCA...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCGGAGTCCTCATTCAGTaGGCAGCAAAGGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESGVLIQ*AAKVAF
Trigger: AAAAGCCACCTTTGCTGCCCACTGAATGAGGACTCC...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTACGTGTAGCGCACTTCTaGCCAGTAGTTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLRVAHF*PVVLQL
Trigger: CAGCTGCAGAACTACTGGTCAGAAGTGCGCTACACG...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAACTGGTACTGCTTATCTaGGGAGACTCATCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAELVLLI*GDSSFR
Trigger: CCTGAAGGATGAGTCTCCTCAGATAAGCAGTACCAG...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCCTGGTACTGCTTATCTaGGGAGACTCATCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSLVLLI*GDSSFR
Trigger: CCTGAAGGATGAGTCTCCTCAGATAAGCAGTACCAG...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACATCCTGCTTACAAACATaGCATTCACAAGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTSCLQT*HSQVFG
Trigger: TCCAAACACTTGTGAATGTCATGTTTGTAAGCAGGA...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACTTGAAGAGATGCATTaGATACCTGATGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRLEEMH*IPDAYL
Trigger: CAAATAAGCATCAGGTATTCAATGCATCTCTTCAAG...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp TCTAGCAGAATCCAAGCAGAACCTTTTGAAATATTCCACTTCCCTCTCTGTCTCTCTTGGATGACACTCTaGACTGGCTGTTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SSRIQAEPFEIFHFPLCLSWMTL*TGCCWT
Trigger: AGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGA...GAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGTCCTTGCTGATGCCATaGAACACGTCACCTACTGAA +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKSLLMP*NTSPTE
Trigger: TTCAGTAGGTGACGTGTTTCATGGCATCAGCAAGGA...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACACATCAATTGAATTGTTaGCTCTGTCTCCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETHQLNC*LCLLSS
Trigger: AGAAGAAAGGAGACAGAGTCAACAATTCAATTGATG...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAACATACTCTCGAGCTTaGTGTTCCAGACGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAETYSRA*CSRRWY
Trigger: GTACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGT...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAGAACGCTGGTACCTCTaGAGCAAGGTACTGTATGTG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEERWYL*SKVLYV
Trigger: CACATACAGTACCTTGCTGCAGAGGTACCAGCGTTC...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCACTACAAAAAGTTGGTaGCGAGCCACTGTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESTTKSW*RATVCE
Trigger: CTCACAGACAGTGGCTCGGCACCAACTTTTTGTAGT...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGGCTCCGGCTGTCATTaGAGATGGTGTCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLGSGCH*RWCQSR
Trigger: TCTGGACTGACACCATCTGCAATGACAGCCGGAGCC...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAACAGGACAGAAACTCTTaGGTGTGTCCACAAACCCAG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEQDRNS*VCPQTQ
Trigger: CTGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTG...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCGAGCTATTTATAAACTaGAACAAATCCTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRELFIN*NKSSTL
Trigger: GAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTC...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTCCAGCTTCCTTTaGTTATGCCTTGCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAESSSFL*LCLARF
Trigger: GAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGA...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCTCCTCCAGCTTCCTTTaGTTATGCCTTGCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSSSSFL*LCLARF
Trigger: GAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGA...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCTCTGGTTCTTCAGTTTaGTCTAGTGAGCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: AIYKLQQILHPPMVNDAFSGSSV*SSEPLW
Trigger: CCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA...GAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACATTAACTTTCTCGTTCTaGAAGGGATCTTACACAAGC +
Preference number: 4 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTLTFSF*KGSYTS
Trigger: GCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAA...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGATTTCTACTTGTTGGTaGAGCTGGAGGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKISTCW*SWRPPS
Trigger: AGAAGGAGGCCTCCAGCTGCACCAACAAGTAGAAAT...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR GCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAATTTCTACTTGTTGGTaGAGCTGGAGGCTCATGCAC +
Preference number: 4 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPISTCW*SWRLMH
Trigger: GTGCATGAGCCTCCAGCTGCACCAACAAGTAGAAAT...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTATCCTGTAGTTGCAGTTaGGGCAGTCGGGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLSCSCS*GSRACS
Trigger: TGAGCATGCCCGACTGCCCCAACTGCAACTACAGGA...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCAGGATCCACTTGAAGTaGGAGCTGGTGAATGTGGAT +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIRIHLK*ELVNVD
Trigger: ATCCACATTCACCAGCTCCCACTTCAAGTGGATCCT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAAATATCAGCAAATTTaGCTGACAATGGTGCAACAT +
Preference number: 4 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRKYQQI*LTMVQH
Trigger: ATGTTGCACCATTGTCAGCCAAATTTGCTGATATTT...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTATTCAGCCTGCTGTGTTaGGTAGGATGGGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLFSLLC*VGWGWT
Trigger: AGTCCACCCCCATCCTACCCAACACAGCAGGCTGAA...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCGGCTGTCATTGCAGATaGTGTCAGTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSGCHCR*CQSRSF
Trigger: GAAGCTTCTGGACTGACACCATCTGCAATGACAGCC...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGTGTGTGGGCTTCTCTaGGCTCAAGAACTGATGGCC +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLVCGLL*AQELMA
Trigger: GGCCATCAGTTCTTGAGCCCAGAGAAGCCCACACAC...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCGATGACACTCTGAACTaGCTGTTGCTGGACTGCACT +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSDDTLN*LLLDCT
Trigger: AGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATC...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGATGACACTCTGAACTaGCTGTTGCTGGACTGCACT +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLADDTLN*LLLDCT
Trigger: AGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATC...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACATTGTGGTTGCTGTTTTaGGGAATGATGGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATLWLLF*GMMGLQ
Trigger: TTGCAGCCCCATCATTCCCCAAAACAGCAACCACAA...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGTTGTGGTTGCTGTTTTaGGGAATGATGGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMLWLLF*GMMGLQ
Trigger: TTGCAGCCCCATCATTCCCCAAAACAGCAACCACAA...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACACAAACCCAGGAGTTGTaGTTGCTGTTTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATQTQEL*LLFWGM
Trigger: CATTCCCCAAAACAGCAACCACAACTCCTGGGTTTG...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAACCCAGGAGTTGTaGTTGCTGTTTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIQTQEL*LLFWGM
Trigger: CATTCCCCAAAACAGCAACCACAACTCCTGGGTTTG...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCACGCGTGCTGCTCACTaGTTTGGTTTCGGAGCTATT +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSTRAAH*FGFGAI
Trigger: AATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCGTTCATATGCCTGGATaGGGAGTGAGAAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQIVHMPG*GVRRGF
Trigger: GAAACCTCTTCTCACTCCCCATCCAGGCATATGAAC...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAAGTGGTTCATATGCCTaGATGGGGAGTGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLASGSYA*MGSEKR
Trigger: CCTCTTCTCACTCCCCATCCAGGCATATGAACCACT...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGATCTTACACAAGCTaGCTACAAGTCAGGGGGATC +
Preference number: 4 (lower is better)
Translates to: VFNFLVLQGILHKLATSQGSYTS*LQVRGI
Trigger: GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCC...CTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACATTCATCATCAGCTTCTaGGGAACTACTGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATFIISF*GTTAGT
Trigger: AGTACCAGCAGTAGTTCCTCAGAAGCTGATGATGAA...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAATCCTGCTTACAAACATaGCATTCACAAGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAESCLQT*HSQVFG
Trigger: TCCAAACACTTGTGAATGTCATGTTTGTAAGCAGGA...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGTCCTGCTTACAAACATaGCATTCACAAGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRSCLQT*HSQVFG
Trigger: TCCAAACACTTGTGAATGTCATGTTTGTAAGCAGGA...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp CTGGGTGGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGTTGACTTTTCGTCCTTaGTGTGGTTCAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LGGLVFNFLVLQGILHKLLTFRP*CGSAAF
Trigger: AAAAGCAGCTGAACCACATCAAGGACGAAAAGTCAA...CAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAACATAGGGGTTGGGTTTaGCTTTTCGTCCTTGATGTG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEHRGWV*LFVLDV
Trigger: CACATCAAGGACGAAAAGTCAAACCCAACCCCTATG...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACACATCAATTGAATTGTTaGCTCTGTCTCCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTHQLNC*LCLLSS
Trigger: AGAAGAAAGGAGACAGAGTCAACAATTCAATTGATG...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACAAAGACATCATCAATTaGATTGTTGACTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHKDIIN*IVDSVS
Trigger: GGAGACAGAGTCAACAATTCAATTGATGATGTCTTT...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCCCTTAACAGGTGTTTATTATaGAGTTCCCACGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: FINCNKSSTLRWSTTLSLNRCLL*SSHVTW
Trigger: CCAAGTGACGTGGGAACTGCATAATAAACACCTGTT...AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTTCTGGTTCTTCAGTTTaGTCTAGTGAGCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: SVCSSEPLWMFPELGTDSSGSSV*SSEPLW
Trigger: CCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA...AGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAACTCTCCTCTCTTTTCTaGTCTGTGATGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAELSSLF*SVMDMR
Trigger: CCTCATGTCCATCACAGAGCAGAAAAGAGAGGAGAG...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCACTCTCCTCTCTTTTCTaGTCTGTGATGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLALSSLF*SVMDMR
Trigger: CCTCATGTCCATCACAGAGCAGAAAAGAGAGGAGAG...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAAGTTCCCACGTCACTTaGAACTTTTTCAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAESSHVT*NFFKCS
Trigger: TGAACACTTGAAAAAGTTCCAAGTGACGTGGGAACT...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAATTAACATGCGCTGCTTaGTTTTCATTGTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAELTCAA*FSLSSA
Trigger: AGCAGATGACAATGAAAACCAAGCAGCGCATGTTAA...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCATCACTACAAAAAGTTaGTGCCGAGCCACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESITTKS*CRATVC
Trigger: ACAGACAGTGGCTCGGCACCAACTTTTTGTAGTGAT...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCATCACTACAAAAAGTTaGTGCCGAGCCACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIITTKS*CRATVC
Trigger: ACAGACAGTGGCTCGGCACCAACTTTTTGTAGTGAT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCAAATATCAGCAAATTTaGCTGACAATGGTGCAACAT +
Preference number: 4 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRKYQQI*LTMVQH
Trigger: ATGTTGCACCATTGTCAGCCAAATTTGCTGATATTT...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGGATTCCATTCATGTTaGCCACCACCTCGGTATCAT +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAGFHSC*PPPRYH
Trigger: ATGATACCGAGGTGGTGGCCAACATGAATGGAATCC...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCCTGAGGAACTACTGCTaGTACTGCTTATCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSLRNYC*YCLSEE
Trigger: CTCCTCAGATAAGCAGTACCAGCAGTAGTTCCTCAG...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTACTGTGTTGGGTAGGATaGGGGTGGACTGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLLCWVG*GWTVCF
Trigger: AAAGCAGACAGTCCACCCCCATCCTACCCAACACAG...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGTTGTGGTTGCTGTTTTaGGGAATGATGGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: VFNFLVLQGILHKLATSQLWLLF*GMMGLQ
Trigger: TTGCAGCCCCATCATTCCCCAAAACAGCAACCACAA...CTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAGTTCATATGCCTGGATaGGGAGTGAGAAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEVHMPG*GVRRGF
Trigger: GAAACCTCTTCTCACTCCCCATCCAGGCATATGAAC...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TCTAGCAGAATCCAAGCAGAACCTTTTGAAATATTCCACTTCCCTCTCTGTCTCTCCCATTCACCTCCTTaGGGAGGAGAAATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SSRIQAEPFEIFHFPLCLSHSPP*GGEIWS
Trigger: ACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGA...GAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCATCAGCAAATTTGGCTaGCAATGGTGCAACATCTTC +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESISKFG*QWCNIF
Trigger: GAAGATGTTGCACCATTGTCAGCCAAATTTGCTGAT...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGATCAGCAAATTTGGCTaGCAATGGTGCAACATCTTC +
Preference number: 4 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMISKFG*QWCNIF
Trigger: GAAGATGTTGCACCATTGTCAGCCAAATTTGCTGAT...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCCTGATGACGTGGCCATaGCAACTTTATTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSLMTWP*QLYLLP
Trigger: TGGAAGCAAATAAAGTTGTCATGGCCACGTCATCAG...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAAGGAGGTCTCTTGGATaGCACTCTGAACTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLRRSLG*HSELAV
Trigger: AACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCT...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGCTGAAATTCCTCCTTaGAACGATCCTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAAEIPP*NDPPLL
Trigger: AAGAAGAGGAGGATCGTTTCAAGGAGGAATTTCAGC...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGCTGAAATTCCTCCTTaGAACGATCCTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VFNFLVLQGILHKLATSQAEIPP*NDPPLL
Trigger: AAGAAGAGGAGGATCGTTTCAAGGAGGAATTTCAGC...CTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR TCA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCCAAGCAGAACCTTTTaGAATATTCCACTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQIPSRTF*NIPLPS
Trigger: AGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGG...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCAACTACTGCTGGTACTaGTTATCTGAGGAGACTCAT +
Preference number: 4 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRINYCWY*LSEETH
Trigger: ATGAGTCTCCTCAGATAAGCAGTACCAGCAGTAGTT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCAGGTGTGGAACAGTGTaGAAAGGCACATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: SSISTLSRSISLGRKTSSRCGTV*KGTCPW
Trigger: CCATGGACATGTGCCTTTGCACACTGTTCCACACCT...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR GCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAAGCTTCCTTTGCTTATaGCTTGCTCGCTTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLSFLCL*LARFAA
Trigger: TGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCT...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAACAGACTCTGTTGCTaGCTGGAAATTTCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESNRLCC*LEISSE
Trigger: CTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTT...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCAGGAACAGACTCTGTTaGTGCCTGGAAATTTCTAGT +
Preference number: 4 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQIRNRLC*CLEISS
Trigger: ACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCT...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCTCTGGTTCTTCAGTTTaGTCTAGTGAGCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSSGSSV*SSEPLW
Trigger: CCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTATTTTTCTTGTTCTTaGCCTTTGGCTGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESYFSCS*PLAEGT
Trigger: AGTCCCCTCAGCCAAAGGGCAAGAACAAGAAAAATA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGTTCCCACGTCACTTaGAACTTTTTCAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQSSHVT*NFFKCS
Trigger: TGAACACTTGAAAAAGTTCCAAGTGACGTGGGAACT...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp GTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGTTGCTCTGAAGAAGTaGCTCCGAAAAGACCAGATT +
Preference number: 4 (lower is better)
Translates to: VFNFLVLQGILHKLATSQVALKK*LRKDQI
Trigger: AATCTGGTCTTTTCGGAGCCACTTCTTCAGAGCAAC...CTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGTTGCTCTGAAGAAGTaGCTCCGAAAAGACCAGATT +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAVALKK*LRKDQI
Trigger: AATCTGGTCTTTTCGGAGCCACTTCTTCAGAGCAAC...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGATCACTACAAAAAGTTaGTGCCGAGCCACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VFNFLVLQGILHKLATSQITTKS*CRATVC
Trigger: ACAGACAGTGGCTCGGCACCAACTTTTTGTAGTGAT...CTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAACATTCACAAGTGTTTaGAGCTTGTTCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLATFTSV*SLFSLL
Trigger: CAGCAGGCTGAACAAGCTCCAAACACTTGTGAATGT...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCACGCGTGCTGCTCACTaGTTTGGTTTCGGAGCTATT +
Preference number: 4 (lower is better)
Translates to: SSISTLSRSISLGRKTSSTRAAH*FGFGAI
Trigger: AATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCCCATTTCCTTCTTTATaGTGCTGCATGATGTCGAAG +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESPFPSL*CCMMSK
Trigger: CTTCGACATCATGCAGCACCATAAAGAAGGAAATGG...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGACCATTTCCTTCTTTATaGTGCTGCATGATGTCGAAG +
Preference number: 4 (lower is better)
Translates to: SGSSVCSSEPLWMFPELGPFPSL*CCMMSK
Trigger: CTTCGACATCATGCAGCACCATAAAGAAGGAAATGG...TCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCGGAGTCCTCATTCAGTaGGCAGCAAAGGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SSISTLSRSISLGRKTSSGVLIQ*AAKVAF
Trigger: AAAAGCCACCTTTGCTGCCCACTGAATGAGGACTCC...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGATAATTTCTACTTGTTaGTGCAGCTGGAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKIISTC*CSWRLM
Trigger: CATGAGCCTCCAGCTGCACCAACAAGTAGAAATTAT...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR TCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGTCCTGCTTACAAACATaGCATTCACAAGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKSCLQT*HSQVFG
Trigger: TCCAAACACTTGTGAATGTCATGTTTGTAAGCAGGA...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATTGACTTTTCGTCCTTaGTGTGGTTCAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAELTFRP*CGSAAF
Trigger: AAAAGCAGCTGAACCACATCAAGGACGAAAAGTCAA...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTACATAGGGGTTGGGTTTaGCTTTTCGTCCTTGATGTG +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLHRGWV*LFVLDV
Trigger: CACATCAAGGACGAAAAGTCAAACCCAACCCCTATG...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCCATAGGGGTTGGGTTTaGCTTTTCGTCCTTGATGTG +
Preference number: 4 (lower is better)
Translates to: SSISTLSRSISLGRKTSSHRGWV*LFVLDV
Trigger: CACATCAAGGACGAAAAGTCAAACCCAACCCCTATG...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR TCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAAAACCCCGTCTCTTTTaGAATATTCCACTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAKPRLF*NIPLPS
Trigger: AGAGGGAAGTGGAATATTTCAAAAGAGACGGGGTTT...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505311.5
CDS-3UTR TCA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCCACCACCATGCCAATTaGATTGTTGACTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSISTLSRSISLGRKTSSHHHAN*IVDSVS
Trigger: GGAGACAGAGTCAACAATTCAATTGGCATGGTGGTG...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR GCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAAACAGGTGTTTATTATaGAGTTCCCACGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAENRCLL*SSHVTW
Trigger: CCAAGTGACGTGGGAACTGCATAATAAACACCTGTT...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGTTTACTATCCGAGACTaGAGGTGTTTCATTGCTAGA +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKFTIRD*RCFIAR
Trigger: TCTAGCAATGAAACACCTGCAGTCTCGGATAGTAAA...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGGAGCTATTTATAAACTaGAACAAATCCTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKELFIN*NKSSTL
Trigger: GAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTC...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGGAACAGACTCTGTTaGTGCCTGGAAATTTCTAGT +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSRNRLC*CLEISS
Trigger: ACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCT...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAAGTTCCCACGTCACTTaGAACTTTTTCAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPSSHVT*NFFKCS
Trigger: TGAACACTTGAAAAAGTTCCAAGTGACGTGGGAACT...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp ATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTAAATATCAGCAAATTTaGCTGACAATGGTGCAACAT +
Preference number: 4 (lower is better)
Translates to: ILHKLATSQGDQTQTAQRKYQQI*LTMVQH
Trigger: ATGTTGCACCATTGTCAGCCAAATTTGCTGATATTT...ACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGGGGCAGTCTTTACTTaGCCTCTCCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLGAVFT*PLLLLL
Trigger: AAGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCC...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCCCATTTCCTTCTTTATaGTGCTGCATGATGTCGAAG +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSPFPSL*CCMMSK
Trigger: CTTCGACATCATGCAGCACCATAAAGAAGGAAATGG...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCATCCTGCTTACAAACATaGCATTCACAAGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLASCLQT*HSQVFG
Trigger: TCCAAACACTTGTGAATGTCATGTTTGTAAGCAGGA...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCACTTGAAGAGATGCATTaGATACCTGATGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPLEEMH*IPDAYL
Trigger: CAAATAAGCATCAGGTATTCAATGCATCTCTTCAAG...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCATCAATTGAATTGTTaGCTCTGTCTCCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKHQLNC*LCLLSS
Trigger: AGAAGAAAGGAGACAGAGTCAACAATTCAATTGATG...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505311.5
ENST00000512465.5
CDS-3UTR TCA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAAAGACATCATCAATTaGATTGTTGACTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GLVFNFLVLQGILHKLATKDIIN*IVDSVS
Trigger: GGAGACAGAGTCAACAATTCAATTGATGATGTCTTT...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR GCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCTTTACTATCCGAGACTaGAGGTGTTTCATTGCTAGA +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSFTIRD*RCFIAR
Trigger: TCTAGCAATGAAACACCTGCAGTCTCGGATAGTAAA...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAGCTATTTATAAACTaGAACAAATCCTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAELFIN*NKSSTL
Trigger: GAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTC...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTTTCCTTCTTTATGGTaGTGCATGATGTCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESFPSLW*CMMSKK
Trigger: TTTCTTCGACATCATGCAGCACCATAAAGAAGGAAA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGATTTCCTTCTTTATGGTaGTGCATGATGTCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SGSSVCSSEPLWMFPELGFPSLW*CMMSKK
Trigger: TTTCTTCGACATCATGCAGCACCATAAAGAAGGAAA...TCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR GCA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGTTTCCTTCTTTATGGTaGTGCATGATGTCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMFPSLW*CMMSKK
Trigger: TTTCTTCGACATCATGCAGCACCATAAAGAAGGAAA...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGAAATATCAGCAAATTTaGCTGACAATGGTGCAACAT +
Preference number: 4 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKKYQQI*LTMVQH
Trigger: ATGTTGCACCATTGTCAGCCAAATTTGCTGATATTT...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CCA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGACTCTGTTGCTGCCTaGAAATTTCTAGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLDSVAA*KFLVSM
Trigger: CATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTC...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCACTTGAAGAGATGCATTaGATACCTGATGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLALEEMH*IPDAYL
Trigger: CAAATAAGCATCAGGTATTCAATGCATCTCTTCAAG...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAACTTGAAGAGATGCATTaGATACCTGATGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAELEEMH*IPDAYL
Trigger: CAAATAAGCATCAGGTATTCAATGCATCTCTTCAAG...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR TCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAAAGACATCATCAATTaGATTGTTGACTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSKDIIN*IVDSVS
Trigger: GGAGACAGAGTCAACAATTCAATTGATGATGTCTTT...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505311.5
ENST00000512465.5
CDS-3UTR CCA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAATATCAGCAAATTTaGCTGACAATGGTGCAACAT +
Preference number: 4 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESKYQQI*LTMVQH
Trigger: ATGTTGCACCATTGTCAGCCAAATTTGCTGATATTT...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CCA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAAATATCAGCAAATTTaGCTGACAATGGTGCAACAT +
Preference number: 4 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSKYQQI*LTMVQH
Trigger: ATGTTGCACCATTGTCAGCCAAATTTGCTGATATTT...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCGTCTGGGCCCGGGGCTaGGACTGCCCCTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: GAWLLGWCSLACLSRVPLVWARG*DCPSVA
Trigger: GGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGAC...GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCCGAGGGGCGTGGCTCTaGGGGTGGTGCAGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSRGAWL*GWCSLA
Trigger: GGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCG...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS GCA 90 bp GGAGATGAACTGGTGCGCTTGCGGCGGGCCCTGCAGGCCAGATGGTaGCTTCACCTTGGCCGCAGCCGACAGCTGCCGGAGCAGGCGGAC +
Preference number: 5 (lower is better)
Translates to: GDELVRLRRALQARW*LHLGRSRQLPEQAD
Trigger: GTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 90 bp GGTGCGCTTGCGGCGGGCCCTGCAGGCCAGATGGTGCCTTCACCTTaGCCGCAGCCGACAGCTGCCGGAGCAGGCGGACCTTCATCTCCA +
Preference number: 5 (lower is better)
Translates to: GALAAGPAGQMVPSP*PQPTAAGAGGPSSP
Trigger: TGGAGATGAAGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 90 bp GAGGGAGATGAACTGGTGCGCTTGCGGCGGGCCCTGCAGGCCAGATaGTGCCTTCACCTTGGCCGCAGCCGACAGCTGCCGGAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: EGDELVRLRRALQAR*CLHLGRSRQLPEQA
Trigger: CGCCTGCTCCGGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS TCA 90 bp GTGCGGCCTGGCAGAGGGCGCCGTACTCCTCAAGCAGGAGGGAGATaGACTGGTGCGCTTGCGGCGGGCCCTGCAGGCCAGATGGTGCCT +
Preference number: 5 (lower is better)
Translates to: VRPGRGRRTPQAGGR*TGALAAGPAGQMVP
Trigger: AGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGAGGAGTACGGCGCCCTCTGCCAGGCCGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 90 bp GCCTGGCAGAGGGCGCCGTACTCCTCAAGCAGGAGGGAGATGAACTaGTGCGCTTGCGGCGGGCCCTGCAGGCCAGATGGTGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: AWQRAPYSSSRREMN*CACGGPCRPDGAFT
Trigger: GGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGAGGAGTACGGCGCCCTCTGCCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGCGAGGGGCGTGGCTCTaGGGGTGGTGCAGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQRGAWL*GWCSLA
Trigger: GGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCG...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCGGTGGTGGGAGGACTaGGCGGGAACTACTGTTCCA +
Preference number: 5 (lower is better)
Translates to: GAWLLGWCSLACLSRVPLRWWED*AGTTVP
Trigger: TGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG...GAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS GCA 90 bp TCCTCAAGCAGGAGGGAGATGAACTGGTGCGCTTGCGGCGGGCCCTaGAGGCCAGATGGTGCCTTCACCTTGGCCGCAGCCGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: SSSRREMNWCACGGP*RPDGAFTLAAADSC
Trigger: GCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 90 bp AGGGCGCCGTACTCCTCAAGCAGGAGGGAGATGAACTGGTGCGCTTaGGGCGGGCCCTGCAGGCCAGATGGTGCCTTCACCTTGGCCGCA +
Preference number: 5 (lower is better)
Translates to: RAPYSSSRREMNWCA*GGPCRPDGAFTLAA
Trigger: TGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGAGGAGTACGGCGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCTCCTTCACTCCCTCCTaGTCAGGCACCAGAGACTGG +
Preference number: 5 (lower is better)
Translates to: QRGAWLLGWCSLACLSRVSFTPS*SGTRDW
Trigger: CCAGTCTCTGGTGCCTGACAAGGAGGGAGTGAAGGA...GACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACGATGGTGCCTTCACCTaGGCCGCAGCCGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYDGAFT*AAADSC
Trigger: GCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATC...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGGATGAACTGGTGCGCTaGCGGCGGGCCCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPDELVR*RRALQA
Trigger: GGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATC...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTCGAGGGGCGTGGCTCTaGGGGTGGTGCAGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: TRTRANGVGRASTSRSGVRGAWL*GWCSLA
Trigger: GGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCG...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS TCA 90 bp CGCTGGGCGGGAGGAACCGCGAGTCCACAGTCCCGGCGCCGCGGCTaGCCAGAGTTAGAGTCCAATATGGCGGACACAAGGGGAAAGGGA +
Preference number: 5 (lower is better)
Translates to: RWAGGTASPQSRRRG*PELESNMADTRGKG
Trigger: TCCCTTTCCCCTTGTGTCCGCCATATTGGACTCTAACTCTGGTCAGCCGCGGCGCCGGGACTGTGGACTCGCGGTTCCTCCCGCCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS GCA 90 bp TGGCAGAGGGCGCCGTACTCCTCAAGCAGGAGGGAGATGAACTGGTaGGCTTGCGGCGGGCCCTGCAGGCCAGATGGTGCCTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: WQRAPYSSSRREMNW*ACGGPCRPDGAFTL
Trigger: CAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGAGGAGTACGGCGCCCTCTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCAGATGAACTGGTGCGCTaGCGGCGGGCCCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: HELTAWAEHQLLGLGFQADELVR*RRALQA
Trigger: GGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATC...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCACTCTGAACTGGCTGTaGCTGGACTGCACTGTGGTA +
Preference number: 5 (lower is better)
Translates to: ARGVALGVVQPGLPLACPTLNWL*LDCTVV
Trigger: TACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGT...GGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTTGGGGAGGAGAAATTaGGAGTCTCTGGTGTCGACG +
Preference number: 5 (lower is better)
Translates to: ARGVALGVVQPGLPLACPLGRRN*ESLVST
Trigger: CGTCGACACCAGAGACTCCAAATTTCTCCTCCCCAA...GGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTGTCTGGGCCCGGGGCTaGGACTGCCCCTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: LLQLPLLMPCSLRCTRAAVWARG*DCPSVA
Trigger: GGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGAC...AGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS GCA 90 bp CCCTGCAGGCCAGATGGTGCCTTCACCTTGGCCGCAGCCGACAGCTaGCGGAGCAGGCGGACCTTCATCTCCAGCACATACTCTCGAGCT +
Preference number: 5 (lower is better)
Translates to: PCRPDGAFTLAAADS*RSRRTFISSTYSRA
Trigger: AGCTCGAGAGTATGTGCTGGAGATGAAGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGGATGGTGCCTTCACCTaGGCCGCAGCCGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGDGAFT*AAADSC
Trigger: GCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATC...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTGATGAACTGGTGCGCTaGCGGCGGGCCCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRADELVR*RRALQA
Trigger: GGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATC...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGAGCCGGACCCCGAGCTaGCAGATGACACACTGGGCG +
Preference number: 5 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGSRTPS*QMTHWA
Trigger: CGCCCAGTGTGTCATCTGCAAGCTCGGGGTCCGGCT...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCCTGGCCTGCCTCTCGCGTGTCCCTCTCCAGGGAGTCCTCATTCAGTGGGCAGGGGCTCCGGCTGTCATaGCAGATGGTGTCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: AWPASRVSLSRESSFSGQGLRLS*QMVSVQ
Trigger: CTGGACTGACACCATCTGCAATGACAGCCGGAGCCC...CTGCCCACTGAATGAGGACTCCCTGGAGAGGGACACGCGAGAGGCAGGCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR CAA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCACAAACCCAGGAGTaGTGGTTGCTGTTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: PARGVALGVVQPGLPLACPQTQE*WLLFWG
Trigger: TCCCCAAAACAGCAACCACAACTCCTGGGTTTGTGG...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCTTGGGGAGGAGAAATTaGGAGTCTCTGGTGTCGACG +
Preference number: 5 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSLGRRN*ESLVST
Trigger: CGTCGACACCAGAGACTCCAAATTTCTCCTCCCCAA...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TTCTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGGTCTGGGCCCGGGGCTaGGACTGCCCCTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: FSSSFLCLCLARFAARVLVWARG*DCPSVA
Trigger: GGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGAC...CAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGTTGTTCTTCCGGCGCTaGGCCCCGCGCTTGGCGTCG +
Preference number: 5 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRLFFRR*APRLAS
Trigger: CGACGCCAAGCGCGGGGCCAAGCGCCGGAAGAACAA...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS TCA 90 bp GGTTCCTGCCTGGCGGTAGATGCAGCGCACCGTGTAGCGCACTTCTaGCCAGTAGTTCTGCAGCTGCTGAGGTTCCCGGTCCGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GSCLAVDAAHRVAHF*PVVLQLLRFPVRLC
Trigger: GCAGAGGCGGACCGGGAACCTCAGCAGCTGCAGAACTACTGGTCAGAAGTGCGCTACACGGTGCGCTGCATCTACCGCCAGGCAGGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS TCA 90 bp AATTTCTCTGCGCTCACTGCAGGCCTCGCACGAGCATGCGGTGTCTaGAGGCAGCGTCTGTGCACCCAGAGCGAGCCTCCCACCACTGCC +
Preference number: 5 (lower is better)
Translates to: NFSALTAGLARACGV*RQRLCTQSEPPTTA
Trigger: GGCAGTGGTGGGAGGCTCGCTCTGGGTGCACAGACGCTGCCTTCAGACACCGCATGCTCGTGCGAGGCCTGCAGTGAGCGCAGAGAAATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS GCA 90 bp AGGCGTCGATCCTCTTCTGGCACTCCAGCCACTCCTCGGCGACTCTaGGCAGCTCCTCCTCGGAACGCTGGTACCTCTGCAGCAAGGTAC +
Preference number: 5 (lower is better)
Translates to: RRRSSSGTPATPRRL*AAPPRNAGTSAARY
Trigger: GTACCTTGCTGCAGAGGTACCAGCGTTCCGAGGAGGAGCTGCGCAGAGTCGCCGAGGAGTGGCTGGAGTGCCAGAAGAGGATCGACGCCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGAAGCCGGACCCCGAGCTaGCAGATGACACACTGGGCG +
Preference number: 5 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGSRTPS*QMTHWA
Trigger: CGCCCAGTGTGTCATCTGCAAGCTCGGGGTCCGGCT...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTAGCCGGACCCCGAGCTaGCAGATGACACACTGGGCG +
Preference number: 5 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFSRTPS*QMTHWA
Trigger: CGCCCAGTGTGTCATCTGCAAGCTCGGGGTCCGGCT...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCTGGGGCAGTCTTTACTaGGCCTCTCCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGWGSLY*ASPSSS
Trigger: AGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCCA...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCTTCCCATTCACCTCCTaGGGGAGGAGAAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: QRGAWLLGWCSLACLSRVFPFTS*GRRNLE
Trigger: CTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAA...GACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTGGCTCGCTGCTGGCCTaGCTGGTCTGCCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LAGSLLALLVCLSFCLPFGSLLA*LVCLSF
Trigger: GAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCC...AAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTAGCTCCGCACAGCCCTaGGCAAGCACCACGGCTCTG +
Preference number: 5 (lower is better)
Translates to: TRTRANGVGRASTSRSGVSSAQP*ASTTAL
Trigger: CAGAGCCGTGGTGCTTGCCAAGGGCTGTGCGGAGCT...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGCTCCGCACAGCCCTaGGCAAGCACCACGGCTCTG +
Preference number: 5 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPSSAQP*ASTTAL
Trigger: CAGAGCCGTGGTGCTTGCCAAGGGCTGTGCGGAGCT...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGGAGGCCTCCTTCTGGTaGGTGGAGGTCGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGEASFW*VEVEVL
Trigger: CAGCACCTCGACCTCCACCAACCAGAAGGAGGCCTC...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR CAA 90 bp CAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCATAATTTCTACTTGTaGGTGCAGCTGGAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: QRGAWLLGWCSLACLSRVHNFYL*VQLEAS
Trigger: GGAGGCCTCCAGCTGCACCAACAAGTAGAAATTATG...GACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS GCA 90 bp CTTCACTCCCTCCTTGTCAGGCACCAGAGACTGGTCCTGGTCATCTaGCAGCGGGGTTCCTGCCTGGCGGTAGATGCAGCGCACCGTGTA +
Preference number: 5 (lower is better)
Translates to: LHSLLVRHQRLVLVI*QRGSCLAVDAAHRV
Trigger: TACACGGTGCGCTGCATCTACCGCCAGGCAGGAACCCCGCTGGCAGATGACCAGGACCAGTCTCTGGTGCCTGACAAGGAGGGAGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 90 bp TGGTGCAGCTGGAGGCCTCCTTCTGGTTGGTGGAGGTCGAGGTGCTaGAGCTGTGCTCAGAGCAGCTGTCCTCATCTGCACTCTCGTCCC +
Preference number: 5 (lower is better)
Translates to: WCSWRPPSGWWRSRC*SCAQSSCPHLHSRP
Trigger: GGGACGAGAGTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGGCCTCCAGCTGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR CAA 90 bp CTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTGATGGTGCCTTCACCTaGGCCGCAGCCGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: LLQLPLLMPCSLRCTRAADGAFT*AAADSC
Trigger: GCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATC...AGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTGCTGCTTGGTTTTCATaGTCATCTGCTCGTCGACAT +
Preference number: 5 (lower is better)
Translates to: PARGVALGVVQPGLPLACAAWFS*SSARRH
Trigger: ATGTCGACGAGCAGATGACAATGAAAACCAAGCAGC...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGTGCTCCTCTTTCCTCTaGGTCAGCCGTAAGCGAAGC +
Preference number: 5 (lower is better)
Translates to: VDDANSYLATAQASEAAVCSSFL*VSRKRS
Trigger: GCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGCA...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGGTCTGGGCCCGGGGCTaGGACTGCCCCTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRVWARG*DCPSVA
Trigger: GGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGAC...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGCGCTTGGCCCCGCGCTaGGCGTCGGCTGGGCTCATG +
Preference number: 5 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRRLAPR*ASAGLM
Trigger: CATGAGCCCAGCCGACGCCAAGCGCGGGGCCAAGCG...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS GCA 90 bp CTGGAGGCCTCCTTCTGGTTGGTGGAGGTCGAGGTGCTGGAGCTGTaGTCAGAGCAGCTGTCCTCATCTGCACTCTCGTCCCCATCATCC +
Preference number: 5 (lower is better)
Translates to: LEASFWLVEVEVLEL*SEQLSSSALSSPSS
Trigger: GGATGATGGGGACGAGAGTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGGCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS-3UTR CAA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTGCAACTGCCTTACTCTaGTTGCTGTCTGTCACATTA +
Preference number: 5 (lower is better)
Translates to: PARGVALGVVQPGLPLACATALL*LLSVTL
Trigger: TAATGTGACAGACAGCAACAAGAGTAAGGCAGTTGC...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
CDS-3UTR CAA 90 bp AGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCCGATACCCACAAACCCAGGAGTaGTGGTTGCTGTTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: SPPRVRRRGTGELSDGRYPQTQE*WLLFWG
Trigger: TCCCCAAAACAGCAACCACAACTCCTGGGTTTGTGG...GTATCGGCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CCAGCGAGGGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTGTGCTGCTCACTGGTTaGGTTTCGGAGCTATTTATA +
Preference number: 5 (lower is better)
Translates to: PARGVALGVVQPGLPLACVLLTG*VSELFI
Trigger: TATAAATAGCTCCGAAACCAAACCAGTGAGCAGCAC...ACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCCCTCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGGTGAGCATGTCCAACTaGGGGCAGTCTTTACTTGGC +
Preference number: 5 (lower is better)
Translates to: VDDANSYLATAQASEAAVVSMSN*GQSLLG
Trigger: GCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCAC...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTCCTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATCTTGTTCTTGCCCTTaGGCTGAGGGGACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LLAGSLLALLVCLSFCLPSCSCP*AEGTLP
Trigger: TGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAGA...TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACCGCCGCCGCCCCGCTaGTTCTTCCGGCGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTPPPPR*FFRRLA
Trigger: GGCCAAGCGCCGGAAGAACAAGCGGGGCGGCGGCGG...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS TCA 90 bp CTGAATTGTGATGGGAGAGCTGGAGCCGGACCCCGAGCTTGCAGATaGCACACTGGGCGGGCTCCTCTCAGCAAGATAGTCAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LNCDGRAGAGPRACR*HTGRAPLSKIVRSR
Trigger: CCTGCTCCTGACTATCTTGCTGAGAGGAGCCCGCCCAGTGTGTCATCTGCAAGCTCGGGGTCCGGCTCCAGCTCTCCCATCACAATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000506904.1
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 90 bp TCCTCGGCGACTCTGCGCAGCTCCTCCTCGGAACGCTGGTACCTCTaGAGCAAGGTACTGTATGTGTCCTCACTGCAGGTGTCGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SSATLRSSSSERWYL*SKVLYVSSLQVSCV
Trigger: CACACACGACACCTGCAGTGAGGACACATACAGTACCTTGCTGCAGAGGTACCAGCGTTCCGAGGAGGAGCTGCGCAGAGTCGCCGAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 90 bp TGTTGGTGCAGCTGGAGGCCTCCTTCTGGTTGGTGGAGGTCGAGGTaGTGGAGCTGTGCTCAGAGCAGCTGTCCTCATCTGCACTCTCGT +
Preference number: 5 (lower is better)
Translates to: CWCSWRPPSGWWRSR*WSCAQSSCPHLHSR
Trigger: ACGAGAGTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGGCCTCCAGCTGCACCAACA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS CCA 90 bp AGAGCAGCTGTCCTCATCTGCACTCTCGTCCCCATCATCCTGCTGTaGGTCGTAGACACCATTCTCGCAGCGGTGCCCTTCGCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: RAAVLICTLVPIILL*VVDTILAAVPFAVR
Trigger: CCTGACTGCGAAGGGCACCGCTGCGAGAATGGTGTCTACGACCCACAGCAGGATGATGGGGACGAGAGTGCAGATGAGGACAGCTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 90 bp AGTCGCAGTACTTGCCCTCCTTCTGGTTGGTGGAGGTCGAGGTGCTaGAGCTGTGCTCAGAGCAGCTGTCCTCATCTGCACTCTCGTCCC +
Preference number: 5 (lower is better)
Translates to: SRSTCPPSGWWRSRC*SCAQSSCPHLHSRP
Trigger: GGGACGAGAGTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGGGCAAGTACTGCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCCTTCACTCCCTCCTaGTCAGGCACCAGAGACTGG +
Preference number: 5 (lower is better)
Translates to: TRTRANGVGRASTSRSGVSFTPS*SGTRDW
Trigger: CCAGTCTCTGGTGCCTGACAAGGAGGGAGTGAAGGA...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GAAACGATCCTCCTCTTCTTCCTCATCCTCCTCCTCCTCCCGCCGCCTCTGCTCTCCTTCACTCCCTCCTaGTCAGGCACCAGAGACTGG +
Preference number: 5 (lower is better)
Translates to: ETILLFFLILLLLPPPLLSFTPS*SGTRDW
Trigger: CCAGTCTCTGGTGCCTGACAAGGAGGGAGTGAAGGA...GAGCAGAGGCGGCGGGAGGAGGAGGAGGATGAGGAAGAAGAGGAGGATCGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGTGGATTCCATTCATGTaGGCCACCACCTCGGTATCA +
Preference number: 5 (lower is better)
Translates to: VDDANSYLATAQASEAAVWIPFM*ATTSVS
Trigger: TGATACCGAGGTGGTGGCCAACATGAATGGAATCCA...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTCCTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCAGTGAGCATGTCCAACTaGGGGCAGTCTTTACTTGGC +
Preference number: 5 (lower is better)
Translates to: LLAGSLLALLVCLSFCLPVSMSN*GQSLLG
Trigger: GCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCAC...TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GGGCGTGGCTCTTGGGGTGGTGCAGCCTGGCCTGCCTCTCGCGTGTCCCTCTCCTCCAAGCAGAACCTTTaGAAATATTCCACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: GRGSWGGAAWPASRVSLSSKQNL*KYSTSL
Trigger: GAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGA...GGAGAGGGACACGCGAGAGGCAGGCCAGGCTGCACCACCCCAAGAGCCACGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS GCA 90 bp GGAGGTCGAGGTGCTGGAGCTGTGCTCAGAGCAGCTGTCCTCATCTaGACTCTCGTCCCCATCATCCTGCTGTGGGTCGTAGACACCATT +
Preference number: 5 (lower is better)
Translates to: GGRGAGAVLRAAVLI*TLVPIILLWVVDTI
Trigger: AATGGTGTCTACGACCCACAGCAGGATGATGGGGACGAGAGTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 90 bp TACTTGCCCTCCTTCTGGTTGGTGGAGGTCGAGGTGCTGGAGCTGTaGTCAGAGCAGCTGTCCTCATCTGCACTCTCGTCCCCATCATCC +
Preference number: 5 (lower is better)
Translates to: YLPSFWLVEVEVLEL*SEQLSSSALSSPSS
Trigger: GGATGATGGGGACGAGAGTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGGGCAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 90 bp AGCAGTCGCAGTACTTGCCCTCCTTCTGGTTGGTGGAGGTCGAGGTaGTGGAGCTGTGCTCAGAGCAGCTGTCCTCATCTGCACTCTCGT +
Preference number: 5 (lower is better)
Translates to: SSRSTCPPSGWWRSR*WSCAQSSCPHLHSR
Trigger: ACGAGAGTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGGGCAAGTACTGCGACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAGATGAACTGGTGCGCTaGCGGCGGGCCCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: RDLTQAGYKSGGSNTNSADELVR*RRALQA
Trigger: GGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATC...TGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CCGCCCAGCCCGCCTAGGGTGAGACGCAGGGGCACAGGAGAGCTGAGTGACGGCATACCTGATGCTTATTaGTGTGATTCTGAACAGGTG +
Preference number: 5 (lower is better)
Translates to: PPSPPRVRRRGTGELSDGIPDAY*CDSEQV
Trigger: CACCTGTTCAGAATCACACAAATAAGCATCAGGTAT...GCCGTCACTCAGCTCTCCTGTGCCCCTGCGTCTCACCCTAGGCGGGCTGGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGACTCTGAACTGGCTGTaGCTGGACTGCACTGTGGTA +
Preference number: 5 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQTLNWL*LDCTVV
Trigger: TACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGT...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGTTGGGGAGGAGAAATTaGGAGTCTCTGGTGTCGACG +
Preference number: 5 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQLGRRN*ESLVST
Trigger: CGTCGACACCAGAGACTCCAAATTTCTCCTCCCCAA...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAGGCTCGCTGCTGGCCTaGCTGGTCTGCCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELGSLLA*LVCLSF
Trigger: GAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCC...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTCTGGGCCCGGGGCTaGGACTGCCCCTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: ILHKLATSQGDQTQTAQRVWARG*DCPSVA
Trigger: GGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGAC...ACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATCTTGTTCTTGCCCTTaGGCTGAGGGGACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGSCSCP*AEGTLP
Trigger: TGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAGA...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCTCGGAGACAGTAGATaGTGGAGAACAAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GNGATWMMQTPIWPRPRPLGDSR*WRTKEA
Trigger: GGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAG...AGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCCGCGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGCTCGGAGACAGTAGATaGTGGAGAACAAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: AAVVGGLGGNYCSNPTAQLGDSR*WRTKEA
Trigger: GGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAG...CTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTCCTCGCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCAACTGCCTTACTCTTGTaGCTGTCTGTCACATTAGCC +
Preference number: 5 (lower is better)
Translates to: LLAGSLLALLVCLSFCLPTALLL*LSVTLA
Trigger: GGCTAATGTGACAGACAGCAACAAGAGTAAGGCAGT...TGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGGTTGTGGTTGCTGTTTaGGGGAATGATGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRVVVAV*GNDGAA
Trigger: TGCAGCCCCATCATTCCCCAAAACAGCAACCACAAC...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTCCACAAACCCAGGAGTaGTGGTTGCTGTTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: TRTRANGVGRASTSRSGVPQTQE*WLLFWG
Trigger: TCCCCAAAACAGCAACCACAACTCCTGGGTTTGTGG...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGAGCAGGACAGAAACTCTaGCGTGTGTCCACAAACCCA +
Preference number: 5 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGAGQKL*RVSTNP
Trigger: TGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTGC...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGCTGCATAATTTCTACTaGTTGGTGCAGCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGLHNFY*LVQLEA
Trigger: GGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAG...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCCTCCTCCAGCTTCCTTaGCTTATGCCTTGCTCGCTT +
Preference number: 5 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPLLQLP*LMPCSL
Trigger: AAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGGGCTCGCTGCTGGCCTaGCTGGTCTGCCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQGSLLA*LVCLSF
Trigger: GAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCC...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGAAGCTCCGCACAGCCCTaGGCAAGCACCACGGCTCTG +
Preference number: 5 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRSSAQP*ASTTAL
Trigger: CAGAGCCGTGGTGCTTGCCAAGGGCTGTGCGGAGCT...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGGAGTACTGGGTGGGCTaGTTTTTAACTTTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: VDDANSYLATAQASEAAVEYWVG*FLTFSF
Trigger: GAACGAGAAAGTTAAAAACAAGCCCACCCAGTACTC...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS CCA 90 bp GGGCGTTGCATACAAGGTGGGGTGGATGAGAGGGCGTGGCAGGTGTaGAACAGTGTGCAAAGGCACATGTCCATGGATGTGAGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: GRCIQGGVDERAWQV*NSVQRHMSMDVRVK
Trigger: CTTTACCCTCACATCCATGGACATGTGCCTTTGCACACTGTTCCACACCTGCCACGCCCTCTCATCCACCCCACCTTGTATGCAACGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGACTGCCTTACTCTTGTaGCTGTCTGTCACATTAGCC +
Preference number: 5 (lower is better)
Translates to: LHAHELTAWAEHQLLGLGTALLL*LSVTLA
Trigger: GGCTAATGTGACAGACAGCAACAAGAGTAAGGCAGT...CCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
CDS-3UTR CAA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAAGATGGTGCCTTCACCTaGGCCGCAGCCGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: GILHKLATSQGDQTQTAQDGAFT*AAADSC
Trigger: GCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATC...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGGCTGCTTGGTTTTCATaGTCATCTGCTCGTCGACAT +
Preference number: 5 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPAAWFS*SSARRH
Trigger: ATGTCGACGAGCAGATGACAATGAAAACCAAGCAGC...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACACGCACACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTCATCACTACAAAAAGTaGGTGCCGAGCCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: TRTRANGVGRASTSRSGVHHYKK*VPSHCL
Trigger: CAGACAGTGGCTCGGCACCAACTTTTTGTAGTGATG...AACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTGTGCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCGCAGGACAGAAACTCTaGCGTGTGTCCACAAACCCA +
Preference number: 5 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSAGQKL*RVSTNP
Trigger: TGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTGC...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGATTGCCCTCCTTCTGGTaGGTGGAGGTCGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRLPSFW*VEVEVL
Trigger: CAGCACCTCGACCTCCACCAACCAGAAGGAGGGCAA...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CAA 90 bp CACGAGCTAACGGCGTGGGCCGAGCATCAACTTCTCGGTCTGGGGTTTCAGGCACTGCATAATTTCTACTaGTTGGTGCAGCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: HELTAWAEHQLLGLGFQALHNFY*LVQLEA
Trigger: GGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAG...TGCCTGAAACCCCAGACCGAGAAGTTGATGCTCGGCCCACGCCGTTAGCTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTCTCCTCCAGCTTCCTTaGCTTATGCCTTGCTCGCTT +
Preference number: 5 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRALLQLP*LMPCSL
Trigger: AAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGTGGGGCAGTCTTTACTaGGCCTCTCCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRWGSLY*ASPSSS
Trigger: AGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCCA...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCGTGAGCATGTCCAACTaGGGGCAGTCTTTACTTGGC +
Preference number: 5 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSVSMSN*GQSLLG
Trigger: GCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCAC...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAGGCTCGCTGCTGGCCTaGCTGGTCTGCCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTGSLLA*LVCLSF
Trigger: GAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCC...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCGTCTGGGCCCGGGGCTaGGACTGCCCCTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESVWARG*DCPSVA
Trigger: GGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGAC...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGAGGCCGCGGTGCTAAAATTGGACCAGTaGATAGACAGTCTTTGTCGG +
Preference number: 5 (lower is better)
Translates to: VDDANSYLATAQASEAAVLKLDQ*IDSLCR
Trigger: CCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG...CACCGCGGCCTCGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAGCTCCGCACAGCCCTaGGCAAGCACCACGGCTCTG +
Preference number: 5 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTSSAQP*ASTTAL
Trigger: CAGAGCCGTGGTGCTTGCCAAGGGCTGTGCGGAGCT...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS GCA 90 bp AGTGTGCAAAGGCACATGTCCATGGATGTGAGGGTAAAGGTGCAGTaGAGGGTGTGTGGGCTTCTCTGGGCTCAAGAACTGATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SVQRHMSMDVRVKVQ*RVCGLLWAQELMAR
Trigger: CCTGGCCATCAGTTCTTGAGCCCAGAGAAGCCCACACACCCTGCACTGCACCTTTACCCTCACATCCATGGACATGTGCCTTTGCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 90 bp GAAGGAGGTCTCTTGGATGACACTCTGAACTGGCTGTTGCTGGACTaGACTGTGGTAGCTGTGCAGGACACAGAGGACGTGGCTGATGAC +
Preference number: 5 (lower is better)
Translates to: EGGLLDDTLNWLLLD*TVVAVQDTEDVADD
Trigger: GTCATCAGCCACGTCCTCTGTGTCCTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATTCCTTCACTCCCTCCTaGTCAGGCACCAGAGACTGG +
Preference number: 5 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNSFTPS*SGTRDW
Trigger: CCAGTCTCTGGTGCCTGACAAGGAGGGAGTGAAGGA...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAGATGGTGCCTTCACCTaGGCCGCAGCCGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEDGAFT*AAADSC
Trigger: GCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATC...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGGATGAACTGGTGCGCTaGCGGCGGGCCCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKDELVR*RRALQA
Trigger: GGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATC...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTCCTATGGTGTCTGTGAAGTaGTTCTCGCCAGTAACTGCT +
Preference number: 5 (lower is better)
Translates to: AGSLLALLVCLSFCLPFPMVSVK*FSPVTA
Trigger: AGCAGTTACTGGCGAGAACAACTTCACAGACACCAT...AGGAAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TGGAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTTGGCCTCTCCAGCCGGACCCCGAGCTaGCAGATGACACACTGGGCG +
Preference number: 5 (lower is better)
Translates to: WKFLVSMSNLGQSLLGLSSRTPS*QMTHWA
Trigger: CGCCCAGTGTGTCATCTGCAAGCTCGGGGTCCGGCT...GGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CTCCTCCAGCTTCCTTTGCTTATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTCATCACTACAAAAAGTaGGTGCCGAGCCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: LLQLPLLMPCSLRCTRAAHHYKK*VPSHCL
Trigger: CAGACAGTGGCTCGGCACCAACTTTTTGTAGTGATG...AGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTGGATTCCATTCATGTaGGCCACCACCTCGGTATCA +
Preference number: 5 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSWIPFM*ATTSVS
Trigger: TGATACCGAGGTGGTGGCCAACATGAATGGAATCCA...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ATGCCTTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTACAAGTGTTTGGAGCTaGTTCAGCCTGCTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: MPCSLRCTRAAHWFGFGATSVWS*FSLLCW
Trigger: CCAACACAGCAGGCTGAACAAGCTCCAAACACTTGT...AGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GCTGGCTCGCTGCTGGCCTTGCTGGTCTGCCTCAGCTTCTGCTTGCCATTTCCTGACATTCACAAGTGTTaGGAGCTTGTTCAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: AGSLLALLVCLSFCLPFPDIHKC*ELVQPA
Trigger: AGCAGGCTGAACAAGCTCCAAACACTTGTGAATGTC...AGGAAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGGGGCTCCGGCTGTCATaGCAGATGGTGTCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQGLRLS*QMVSVQ
Trigger: CTGGACTGACACCATCTGCAATGACAGCCGGAGCCC...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTGTCACCCAGGCATGATCTCGGCTCACTGGAACCTCCATCTTCCAGGCTCAAGGTTGTGGTTGCTGTTTaGGGGAATGATGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: LSPRHDLGSLEPPSSRLKVVVAV*GNDGAA
Trigger: TGCAGCCCCATCATTCCCCAAAACAGCAACCACAAC...CTTGAGCCTGGAAGATGGAGGTTCCAGTGAGCCGAGATCATGCCTGGGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CAA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAATTGCCCTCCTTCTGGTaGGTGGAGGTCGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: EDLAGTTVPIRQHRATIELPSFW*VEVEVL
Trigger: CAGCACCTCGACCTCCACCAACCAGAAGGAGGGCAA...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CAA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACTTGCCCTCCTTCTGGTaGGTGGAGGTCGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: TELQSKESHAQTTRTRANLPSFW*VEVEVL
Trigger: CAGCACCTCGACCTCCACCAACCAGAAGGAGGGCAA...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000637812.2
CDS-3UTR CAA 90 bp CTGTCACCCAGGCATGATCTCGGCTCACTGGAACCTCCATCTTCCAGGCTCAAGTTGGGGAGGAGAAATTaGGAGTCTCTGGTGTCGACG +
Preference number: 5 (lower is better)
Translates to: LSPRHDLGSLEPPSSRLKLGRRN*ESLVST
Trigger: CGTCGACACCAGAGACTCCAAATTTCTCCTCCCCAA...CTTGAGCCTGGAAGATGGAGGTTCCAGTGAGCCGAGATCATGCCTGGGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CAA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGAGTTGATAGACAGTCTTaGTCGGGTCTGTCTAGCAGA +
Preference number: 5 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGVDRQS*SGLSSR
Trigger: TCTGCTAGACAGACCCGACAAAGACTGTCTATCAAC...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCCGGTGGTGGGAGGACTaGGCGGGAACTACTGTTCCA +
Preference number: 5 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRRWWED*AGTTVP
Trigger: TGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS GCA 90 bp TTGCAGTTGGGGCAGTCGGGCATGCTCAGCCGGGACGATAACATGTaGCTCATGGTGTCTGTGAAGTTGTTCTCGCCAGTAACTGCTTTC +
Preference number: 5 (lower is better)
Translates to: LQLGQSGMLSRDDNM*LMVSVKLFSPVTAF
Trigger: GAAAGCAGTTACTGGCGAGAACAACTTCACAGACACCATGAGGCACATGTTATCGTCCCGGCTGAGCATGCCCGACTGCCCCAACTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTTGGCCTCTCCTTGATGGTGCCTTCACCTaGGCCGCAGCCGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: EISSEHVQLGAVFTWPLLDGAFT*AAADSC
Trigger: GCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATC...AAGGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAGATGAACTGGTGCGCTaGCGGCGGGCCCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEDELVR*RRALQA
Trigger: GGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATC...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCATGGTGTCTGTGAAGTaGTTCTCGCCAGTAACTGCT +
Preference number: 5 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSMVSVK*FSPVTA
Trigger: AGCAGTTACTGGCGAGAACAACTTCACAGACACCAT...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCAGGGCTCCGGCTGTCATaGCAGATGGTGTCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: ELLFQSDSTELQSKESHAGLRLS*QMVSVQ
Trigger: CTGGACTGACACCATCTGCAATGACAGCCGGAGCCC...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAGAAGGGCTTCCGGTCTaGTTTCTGAGAGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNREGLPV*FLRVLA
Trigger: GGCCAACACTCTCAGAAACAAGACCGGAAGCCCTTC...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGGAAGGGCTTCCGGTCTaGTTTCTGAGAGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTREGLPV*FLRVLA
Trigger: GGCCAACACTCTCAGAAACAAGACCGGAAGCCCTTC...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGTTGTGGTTGCTGTTTaGGGGAATGATGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: ELQSKESHAQTTRTRANGVVVAV*GNDGAA
Trigger: TGCAGCCCCATCATTCCCCAAAACAGCAACCACAAC...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGCAGGACAGAAACTCTaGCGTGTGTCCACAAACCCA +
Preference number: 5 (lower is better)
Translates to: ELQSKESHAQTTRTRANGAGQKL*RVSTNP
Trigger: TGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTGC...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCTGCTCCTCTTTCCTCTaGGTCAGCCGTAAGCGAAGC +
Preference number: 5 (lower is better)
Translates to: SATCTLGDSRLWRTKEACCSSFL*VSRKRS
Trigger: GCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGCA...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTCCTTTGCTTATGCCTaGCTCGCTTCGCTGCACGCG +
Preference number: 5 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQSFAYA*LASLHA
Trigger: CGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGA...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCTCCTTTGCTTATGCCTaGCTCGCTTCGCTGCACGCG +
Preference number: 5 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRSFAYA*LASLHA
Trigger: CGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGA...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCCTCCGCTAAAATTGGACCAGTaGATAGACAGTCTTTGTCGG +
Preference number: 5 (lower is better)
Translates to: NGATWMMQTPIWPRPRPPLKLDQ*IDSLCR
Trigger: CCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG...CGGAGGCCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCCGGTGGTGGGAGGACTaGGCGGGAACTACTGTTCCA +
Preference number: 5 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGIRWWED*AGTTVP
Trigger: TGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGGAGTACTGGGTGGGCTaGTTTTTAACTTTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: RGNGATWMMQTPIWPRPREYWVG*FLTFSF
Trigger: GAACGAGAAAGTTAAAAACAAGCCCACCCAGTACTC...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS TCA 90 bp GGGCTCCCCACTACTCTCGCCGTCCGCTTCTTCATCATCAGCTTCTaGGGAACTACTGCTGGTACTGCTTATCTGAGGAGACTCATCCTT +
Preference number: 5 (lower is better)
Translates to: GLPTTLAVRFFIISF*GTTAGTAYLRRLIL
Trigger: AAGGATGAGTCTCCTCAGATAAGCAGTACCAGCAGTAGTTCCTCAGAAGCTGATGATGAAGAAGCGGACGGCGAGAGTAGTGGGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 90 bp AACACGTCACCTACTGAAGGAGGTCTCTTGGATGACACTCTGAACTaGCTGTTGCTGGACTGCACTGTGGTAGCTGTGCAGGACACAGAG +
Preference number: 5 (lower is better)
Translates to: NTSPTEGGLLDDTLN*LLLDCTVVAVQDTE
Trigger: CTCTGTGTCCTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCTTCAGTAGGTGACGTGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 90 bp GCCAGGACTGGACAAGGGTGCCAGTATCAATGCTCTTATTCACACTaGTCTGAAGGTCCTGCTCGTCGACATAGGCGTCGATCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: ARTGQGCQYQCSYSH*SEGPARRHRRRSSS
Trigger: AGAAGAGGATCGACGCCTATGTCGACGAGCAGGACCTTCAGACCAGTGTGAATAAGAGCATTGATACTGGCACCCTTGTCCAGTCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502458.5
CDS-3UTR CAA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACATCCTTCACTCCCTCCTaGTCAGGCACCAGAGACTGG +
Preference number: 5 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTSFTPS*SGTRDW
Trigger: CCAGTCTCTGGTGCCTGACAAGGAGGGAGTGAAGGA...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCCACATACTCTCGAGCTaGCTGTTCCAGACGCTGGTA +
Preference number: 5 (lower is better)
Translates to: SATCTLGDSRLWRTKEACHILSS*LFQTLV
Trigger: TACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGTG...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTGTCACCCAGGCATGATCTCGGCTCACTGGAACCTCCATCTTCCAGGCTCAAGATGGTGTCTGTGAAGTaGTTCTCGCCAGTAACTGCT +
Preference number: 5 (lower is better)
Translates to: LSPRHDLGSLEPPSSRLKMVSVK*FSPVTA
Trigger: AGCAGTTACTGGCGAGAACAACTTCACAGACACCAT...CTTGAGCCTGGAAGATGGAGGTTCCAGTGAGCCGAGATCATGCCTGGGTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CAA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACTCTGAACTGGCTGTaGCTGGACTGCACTGTGGTA +
Preference number: 5 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELTLNWL*LDCTVV
Trigger: TACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGT...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGATGGGGCTGCAAGATTaGCAAGGTGAGGTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQMGLQD*QGEVWR
Trigger: CCTCCACACCTCACCTTGCAAATCTTGCAGCCCCAT...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTAGTTGTGGTTGCTGTTTaGGGGAATGATGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: LLASLHACCSLVWFRSYLVVVAV*GNDGAA
Trigger: TGCAGCCCCATCATTCCCCAAAACAGCAACCACAAC...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGACCCAGGAGTTGTGGTaGCTGTTTTGGGGAATGATG +
Preference number: 5 (lower is better)
Translates to: SYNRRSLTHRLHAHELTATQELW*LFWGMM
Trigger: CATCATTCCCCAAAACAGCAACCACAACTCCTGGGT...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTAGCAGGACAGAAACTCTaGCGTGTGTCCACAAACCCA +
Preference number: 5 (lower is better)
Translates to: LLASLHACCSLVWFRSYLAGQKL*RVSTNP
Trigger: TGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTGC...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCATCCTTTGCTTATGCCTaGCTCGCTTCGCTGCACGCG +
Preference number: 5 (lower is better)
Translates to: RDLTQAGYKSGGSNTNSASFAYA*LASLHA
Trigger: CGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGA...TGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTACTCCTCCAGCTTCCTTaGCTTATGCCTTGCTCGCTT +
Preference number: 5 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELLLQLP*LMPCSL
Trigger: AAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAGTGAGCATGTCCAACTaGGGGCAGTCTTTACTTGGC +
Preference number: 5 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELVSMSN*GQSLLG
Trigger: GCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCAC...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGTTCCCATTCACCTCCTaGGGGAGGAGAAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: SYNRRSLTHRLHAHELTAFPFTS*GRRNLE
Trigger: CTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAA...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCGGCTCGCTGCTGGCCTaGCTGGTCTGCCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIGSLLA*LVCLSF
Trigger: GAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCC...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCGGCTCGCTGCTGGCCTaGCTGGTCTGCCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQIGSLLA*LVCLSF
Trigger: GAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCC...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCTTTGACTTTTCGTCCTaGATGTGGTTCAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: CRGNGATWMMQTPIWPRPFDFSS*MWFSCF
Trigger: AAAGCAGCTGAACCACATCAAGGACGAAAAGTCAAA...GGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACTCTTGTTCTTGCCCTTaGGCTGAGGGGACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: RELLFQSDSTELQSKESHSCSCP*AEGTLP
Trigger: TGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAGA...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTATCTGGCCACGGCCCAGGCTAAAATTGGACCAGTaGATAGACAGTCTTTGTCGG +
Preference number: 5 (lower is better)
Translates to: RGNGATWMMQTPIWPRPRLKLDQ*IDSLCR
Trigger: CCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG...CCTGGGCCGTGGCCAGATAGGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTACTCGGAGACAGTAGATaGTGGAGAACAAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELLGDSR*WRTKEA
Trigger: GGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAG...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS CCA 90 bp AACTCTTGCGTGTGTCCACAAACCCAGGAGTTGTGGTTGCTGTTTTaGGGAATGATGGGGCTGCAAGATTTGCAAGGTGAGGTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: NSCVCPQTQELWLLF*GMMGLQDLQGEVWR
Trigger: CCTCCACACCTCACCTTGCAAATCTTGCAGCCCCATCATTCCCCAAAACAGCAACCACAACTCCTGGGTTTGTGGACACACGCAAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACCACATACTCTCGAGCTaGCTGTTCCAGACGCTGGTA +
Preference number: 5 (lower is better)
Translates to: TELQSKESHAQTTRTRANHILSS*LFQTLV
Trigger: TACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGTG...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCATCACTACAAAAAGTaGGTGCCGAGCCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNHHYKK*VPSHCL
Trigger: CAGACAGTGGCTCGGCACCAACTTTTTGTAGTGATG...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGGGCTCCGGCTGTCATaGCAGATGGTGTCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKGLRLS*QMVSVQ
Trigger: CTGGACTGACACCATCTGCAATGACAGCCGGAGCCC...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GTGAGGACACATGACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGAATACCTGATGCTTATTaGTGTGATTCTGAACAGGTG +
Preference number: 5 (lower is better)
Translates to: VRTHDRTGRNAEATEPRGIPDAY*CDSEQV
Trigger: CACCTGTTCAGAATCACACAAATAAGCATCAGGTAT...TCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGTCATGTGTCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CGGTGGTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTTTGTTTCTGAGAGTGTaGGCCCTAATATTTCACTCC +
Preference number: 5 (lower is better)
Translates to: RWWEDLAGTTVPIRQHRALFLRV*ALIFHS
Trigger: GGAGTGAAATATTAGGGCCAACACTCTCAGAAACAA...AGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCACCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACTCTGAACTGGCTGTaGCTGGACTGCACTGTGGTA +
Preference number: 5 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRTLNWL*LDCTVV
Trigger: TACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGT...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGACTGAAGGAGGTCTCTaGGATGACACTCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRTEGGL*DDTLNW
Trigger: CCAGTTCAGAGTGTCATCCAAGAGACCTCCTTCAGT...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAACTGAAGGAGGTCTCTaGGATGACACTCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: GGLGGNYCSNPTAQSYNRTEGGL*DDTLNW
Trigger: CCAGTTCAGAGTGTCATCCAAGAGACCTCCTTCAGT...TCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCATGGGGCTGCAAGATTaGCAAGGTGAGGTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGIMGLQD*QGEVWR
Trigger: CCTCCACACCTCACCTTGCAAATCTTGCAGCCCCAT...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACCCAGGAGTTGTGGTaGCTGTTTTGGGGAATGATG +
Preference number: 5 (lower is better)
Translates to: LATSQGDQTQTAQRVHSETQELW*LFWGMM
Trigger: CATCATTCCCCAAAACAGCAACCACAACTCCTGGGT...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGGCCTGCACCCAGGAGTTGTGGTaGCTGTTTTGGGGAATGATG +
Preference number: 5 (lower is better)
Translates to: SATCTLGDSRLWRTKEACTQELW*LFWGMM
Trigger: CATCATTCCCCAAAACAGCAACCACAACTCCTGGGT...GCAGGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACCCACAAACCCAGGAGTaGTGGTTGCTGTTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: TELQSKESHAQTTRTRANPQTQE*WLLFWG
Trigger: TCCCCAAAACAGCAACCACAACTCCTGGGTTTGTGG...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGCTGCATAATTTCTACTaGTTGGTGCAGCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRLHNFY*LVQLEA
Trigger: GGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAG...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTTGCTCCTCTTTCCTCTaGGTCAGCCGTAAGCGAAGC +
Preference number: 5 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSCSSFL*VSRKRS
Trigger: GCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGCA...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGGAGGAGAAATTTGGAGTCTCTGGTGTCGACGGGGTCTGCAGCATCCCCATCAGTGCTGCTCACTGGTTaGGTTTCGGAGCTATTTATA +
Preference number: 5 (lower is better)
Translates to: GRRNLESLVSTGSAASPSVLLTG*VSELFI
Trigger: TATAAATAGCTCCGAAACCAAACCAGTGAGCAGCAC...TGATGGGGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATTTCTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAATCCTTTGCTTATGCCTaGCTCGCTTCGCTGCACGCG +
Preference number: 5 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAESFAYA*LASLHA
Trigger: CGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGA...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACCTCCTCCAGCTTCCTTaGCTTATGCCTTGCTCGCTT +
Preference number: 5 (lower is better)
Translates to: TELQSKESHAQTTRTRANLLQLP*LMPCSL
Trigger: AAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGTGGGGCAGTCTTTACTaGGCCTCTCCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRWGSLY*ASPSSS
Trigger: AGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCCA...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACAGGACAGGGCGCAATGCAGAGGCAACGGAGCCACGTGGATGATGCAAACTCCTTTGACTTTTCGTCCTaGATGTGGTTCAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: TGQGAMQRQRSHVDDANSFDFSS*MWFSCF
Trigger: AAAGCAGCTGAACCACATCAAGGACGAAAAGTCAAA...GGAGTTTGCATCATCCACGTGGCTCCGTTGCCTCTGCATTGCGCCCTGTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACATCTTGTTCTTGCCCTTaGGCTGAGGGGACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: TQAGYKSGGSNTNSATCTSCSCP*AEGTLP
Trigger: TGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAGA...TGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCTGCAGTGAGCCAAGATaGCACCATTGTACCCCAGAC +
Preference number: 5 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRCSEPR*HHCTPD
Trigger: GTCTGGGGTACAATGGTGCAATCTTGGCTCACTGCA...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324666.9
CDS-3UTR CAA 90 bp GAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGCAACTGCCTTACTCTaGTTGCTGTCTGTCACATTA +
Preference number: 5 (lower is better)
Translates to: ELQSKESHAQTTRTRANGATALL*LLSVTL
Trigger: TAATGTGACAGACAGCAACAAGAGTAAGGCAGTTGC...GCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
CDS-3UTR CAA 90 bp AGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCACACATACTCTCGAGCTaGCTGTTCCAGACGCTGGTA +
Preference number: 5 (lower is better)
Translates to: RDLTQAGYKSGGSNTNSAHILSS*LFQTLV
Trigger: TACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGTG...TGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAACAAGTGTTTGGAGCTaGTTCAGCCTGCTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: EDLAGTTVPIRQHRATIETSVWS*FSLLCW
Trigger: CCAACACAGCAGGCTGAACAAGCTCCAAACACTTGT...TTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACACAAGTGTTTGGAGCTaGTTCAGCCTGCTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: TELQSKESHAQTTRTRANTSVWS*FSLLCW
Trigger: CCAACACAGCAGGCTGAACAAGCTCCAAACACTTGT...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGGGGCTCCGGCTGTCATaGCAGATGGTGTCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKGLRLS*QMVSVQ
Trigger: CTGGACTGACACCATCTGCAATGACAGCCGGAGCCC...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGGGCTCCGGCTGTCATaGCAGATGGTGTCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMGLRLS*QMVSVQ
Trigger: CTGGACTGACACCATCTGCAATGACAGCCGGAGCCC...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATGAAGGGCTTCCGGTCTaGTTTCTGAGAGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: NFLVLQGILHKLATSQGDEGLPV*FLRVLA
Trigger: GGCCAACACTCTCAGAAACAAGACCGGAAGCCCTTC...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAATGGGGCTGCAAGATTaGCAAGGTGAGGTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEMGLQD*QGEVWR
Trigger: CCTCCACACCTCACCTTGCAAATCTTGCAGCCCCAT...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACACCCAGGAGTTGTGGTaGCTGTTTTGGGGAATGATG +
Preference number: 5 (lower is better)
Translates to: RELLFQSDSTELQSKESHTQELW*LFWGMM
Trigger: CATCATTCCCCAAAACAGCAACCACAACTCCTGGGT...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCTTGCCCTCCTTCTGGTaGGTGGAGGTCGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRILPSFW*VEVEVL
Trigger: CAGCACCTCGACCTCCACCAACCAGAAGGAGGGCAA...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505311.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATTGCTCCTCTTTCCTCTaGGTCAGCCGTAAGCGAAGC +
Preference number: 5 (lower is better)
Translates to: NFLVLQGILHKLATSQGDCSSFL*VSRKRS
Trigger: GCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGCA...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTGGGTGGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGTCCTTTGCTTATGCCTaGCTCGCTTCGCTGCACGCG +
Preference number: 5 (lower is better)
Translates to: LGGLVFNFLVLQGILHKLSFAYA*LASLHA
Trigger: CGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGA...CAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAAGTGAGCATGTCCAACTaGGGGCAGTCTTTACTTGGC +
Preference number: 5 (lower is better)
Translates to: GILHKLATSQGDQTQTAQVSMSN*GQSLLG
Trigger: GCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCAC...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGGTTGATAGACAGTCTTaGTCGGGTCTGTCTAGCAGA +
Preference number: 5 (lower is better)
Translates to: LATSQGDQTQTAQRVHSEVDRQS*SGLSSR
Trigger: TCTGCTAGACAGACCCGACAAAGACTGTCTATCAAC...CTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGGAGGAGAAATTTGGAGTCTCTGGTGTCGACGGGGTCTGCAGCATCCCCATCACTAAAATTGGACCAGTaGATAGACAGTCTTTGTCGG +
Preference number: 5 (lower is better)
Translates to: GRRNLESLVSTGSAASPSLKLDQ*IDSLCR
Trigger: CCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG...TGATGGGGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATTTCTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGAACTGCCTTACTCTTGTaGCTGTCTGTCACATTAGCC +
Preference number: 5 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRTALLL*LSVTLA
Trigger: GGCTAATGTGACAGACAGCAACAAGAGTAAGGCAGT...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
CDS-3UTR CAA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTCCTTCACTCCCTCCTaGTCAGGCACCAGAGACTGG +
Preference number: 5 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESSFTPS*SGTRDW
Trigger: CCAGTCTCTGGTGCCTGACAAGGAGGGAGTGAAGGA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGCACATACTCTCGAGCTaGCTGTTCCAGACGCTGGTA +
Preference number: 5 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRHILSS*LFQTLV
Trigger: TACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGTG...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGAGCTGCTTGGTTTTCATaGTCATCTGCTCGTCGACAT +
Preference number: 5 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRRAAWFS*SSARRH
Trigger: ATGTCGACGAGCAGATGACAATGAAAACCAAGCAGC...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAGTTAACATGCGCTGCTaGGTTTTCATTGTCATCTGC +
Preference number: 5 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELVNMRC*VFIVIC
Trigger: GCAGATGACAATGAAAACCAAGCAGCGCATGTTAAC...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGATGGTGTCTGTGAAGTaGTTCTCGCCAGTAACTGCT +
Preference number: 5 (lower is better)
Translates to: LQVRGIKHKQRNVYTRRQMVSVK*FSPVTA
Trigger: AGCAGTTACTGGCGAGAACAACTTCACAGACACCAT...CTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAAGCCGGACCCCGAGCTaGCAGATGACACACTGGGCG +
Preference number: 5 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLSRTPS*QMTHWA
Trigger: CGCCCAGTGTGTCATCTGCAAGCTCGGGGTCCGGCT...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACATCACTACAAAAAGTaGGTGCCGAGCCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: ELLFQSDSTELQSKESHAHHYKK*VPSHCL
Trigger: CAGACAGTGGCTCGGCACCAACTTTTTGTAGTGATG...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAATGGATTCCATTCATGTaGGCCACCACCTCGGTATCA +
Preference number: 5 (lower is better)
Translates to: GILHKLATSQGDQTQTAQWIPFM*ATTSVS
Trigger: TGATACCGAGGTGGTGGCCAACATGAATGGAATCCA...TTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGTGGATTCCATTCATGTaGGCCACCACCTCGGTATCA +
Preference number: 5 (lower is better)
Translates to: LRCTRAAHWFGFGAIYKLWIPFM*ATTSVS
Trigger: TGATACCGAGGTGGTGGCCAACATGAATGGAATCCA...CAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGACATTCACAAGTGTTaGGAGCTTGTTCAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETDIHKC*ELVQPA
Trigger: AGCAGGCTGAACAAGCTCCAAACACTTGTGAATGTC...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCCCTTGAAGGGCTTCCGGTCTaGTTTCTGAGAGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: FINCNKSSTLRWSTTLSLEGLPV*FLRVLA
Trigger: GGCCAACACTCTCAGAAACAAGACCGGAAGCCCTTC...AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCAACTGAAGGAGGTCTCTaGGATGACACTCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: ELLFQSDSTELQSKESHATEGGL*DDTLNW
Trigger: CCAGTTCAGAGTGTCATCCAAGAGACCTCCTTCAGT...TGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGGCAGGACAGAAACTCTaGCGTGTGTCCACAAACCCA +
Preference number: 5 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRAGQKL*RVSTNP
Trigger: TGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTGC...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCTTGCCCTCCTTCTGGTaGGTGGAGGTCGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSLPSFW*VEVEVL
Trigger: CAGCACCTCGACCTCCACCAACCAGAAGGAGGGCAA...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505311.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACACTGCATAATTTCTACTaGTTGGTGCAGCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTLHNFY*LVQLEA
Trigger: GGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAG...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGGCGTTTGACTTTTCGTCCTaGATGTGGTTCAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: SYNRRSLTHRLHAHELTAFDFSS*MWFSCF
Trigger: AAAGCAGCTGAACCACATCAAGGACGAAAAGTCAAA...CGCCGTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAACTCGGAGACAGTAGATaGTGGAGAACAAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAELGDSR*WRTKEA
Trigger: GGCCTCCTTTGTTCTCCACAATCTACTGTCTCCGAG...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS TCA 90 bp GTGGTTCCTAGCCTGATCTGTGACACCAGTGCGGGCAAGTTGCTCTaGAGAAGTGGCTCCGAAAAGACCAGATTTTCAAACAGGTGTTTA +
Preference number: 5 (lower is better)
Translates to: VVPSLICDTSAGKLL*RSGSEKTRFSNRCL
Trigger: TAAACACCTGTTTGAAAATCTGGTCTTTTCGGAGCCACTTCTTCAGAGCAACTTGCCCGCACTGGTGTCACAGATCAGGCTAGGAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCGTTAACATGCGCTGCTaGGTTTTCATTGTCATCTGC +
Preference number: 5 (lower is better)
Translates to: GTTVPIRQHRATIEGVSRVNMRC*VFIVIC
Trigger: GCAGATGACAATGAAAACCAAGCAGCGCATGTTAAC...GCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATACAAGTGTTTGGAGCTaGTTCAGCCTGCTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: NFLVLQGILHKLATSQGDTSVWS*FSLLCW
Trigger: CCAACACAGCAGGCTGAACAAGCTCCAAACACTTGT...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTGACATTCACAAGTGTTaGGAGCTTGTTCAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: YKSGGSNTNSATCTLGDSDIHKC*ELVQPA
Trigger: AGCAGGCTGAACAAGCTCCAAACACTTGTGAATGTC...ACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGTTGTTTCTGAGAGTGTaGGCCCTAATATTTCACTCC +
Preference number: 5 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRLFLRV*ALIFHS
Trigger: GGAGTGAAATATTAGGGCCAACACTCTCAGAAACAA...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGGAAGGGCTTCCGGTCTaGTTTCTGAGAGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKEGLPV*FLRVLA
Trigger: GGCCAACACTCTCAGAAACAAGACCGGAAGCCCTTC...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGAAGGGCTTCCGGTCTaGTTTCTGAGAGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMEGLPV*FLRVLA
Trigger: GGCCAACACTCTCAGAAACAAGACCGGAAGCCCTTC...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCACTCTGAACTGGCTGTaGCTGGACTGCACTGTGGTA +
Preference number: 5 (lower is better)
Translates to: AIYKLQQILHPPMVNDAFTLNWL*LDCTVV
Trigger: TACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGT...GAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAATGGGGCTGCAAGATTaGCAAGGTGAGGTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: GLVFNFLVLQGILHKLATMGLQD*QGEVWR
Trigger: CCTCCACACCTCACCTTGCAAATCTTGCAGCCCCAT...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCATGGGGCTGCAAGATTaGCAAGGTGAGGTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIMGLQD*QGEVWR
Trigger: CCTCCACACCTCACCTTGCAAATCTTGCAGCCCCAT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAACCCAGGAGTTGTGGTaGCTGTTTTGGGGAATGATG +
Preference number: 5 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAETQELW*LFWGMM
Trigger: CATCATTCCCCAAAACAGCAACCACAACTCCTGGGT...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp ACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTAACGTGCTGCTCACTGGTTaGGTTTCGGAGCTATTTATA +
Preference number: 5 (lower is better)
Translates to: TELQSKESHAQTTRTRANVLLTG*VSELFI
Trigger: TATAAATAGCTCCGAAACCAAACCAGTGAGCAGCAC...GTTAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TCTAGCAGAATCCAAGCAGAACCTTTTGAAATATTCCACTTCCCTCTCTGTCTCTCCTTTGCTTATGCCTaGCTCGCTTCGCTGCACGCG +
Preference number: 5 (lower is better)
Translates to: SSRIQAEPFEIFHFPLCLSFAYA*LASLHA
Trigger: CGCGTGCAGCGAAGCGAGCAAGGCATAAGCAAAGGA...GAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATTTCCCATTCACCTCCTaGGGGAGGAGAAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: NFLVLQGILHKLATSQGDFPFTS*GRRNLE
Trigger: CTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAA...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATTTGACTTTTCGTCCTaGATGTGGTTCAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LLASLHACCSLVWFRSYLFDFSS*MWFSCF
Trigger: AAAGCAGCTGAACCACATCAAGGACGAAAAGTCAAA...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTCTTGTTCTTGCCCTTaGGCTGAGGGGACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESSCSCP*AEGTLP
Trigger: TGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAGA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGTCCAAGCAGAACCTTTaGAAATATTCCACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: SWLQVRGIKHKQRNVYTRSKQNL*KYSTSL
Trigger: GAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGA...CCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GTGGGAGGACTTGGCGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATTCCAAGCAGAACCTTTaGAAATATTCCACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: VGGLGGNYCSNPTAQSYNSKQNL*KYSTSL
Trigger: GAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGA...ATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCGCCAAGTCCTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TGCTGCTTCCCATTCACCTCCTTGGGGAGGAGAAATTTGGAGTCTCTGGTGTCGTCCAAGCAGAACCTTTaGAAATATTCCACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: CCFPFTSLGRRNLESLVSSKQNL*KYSTSL
Trigger: GAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGA...CGACACCAGAGACTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGAGAGTACTGGGTGGGCTaGTTTTTAACTTTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: WLQVRGIKHKQRNVYTRREYWVG*FLTFSF
Trigger: GAACGAGAAAGTTAAAAACAAGCCCACCCAGTACTC...TCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS TCA 90 bp GTCATTGCAGATGGTGTCAGTCCAGAAGCTTCCTGCTTACAAACATaGCATTCACAAGTGTTTGGAGCTTGTTCAGCCTGCTGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: VIADGVSPEASCLQT*HSQVFGACSACCVG
Trigger: CCCAACACAGCAGGCTGAACAAGCTCCAAACACTTGTGAATGTCATGTTTGTAAGCAGGAAGCTTCTGGACTGACACCATCTGCAATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGACTGCCTTACTCTTGTaGCTGTCTGTCACATTAGCC +
Preference number: 5 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRTALLL*LSVTLA
Trigger: GGCTAATGTGACAGACAGCAACAAGAGTAAGGCAGT...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
CDS-3UTR CAA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAACTGCCTTACTCTTGTaGCTGTCTGTCACATTAGCC +
Preference number: 5 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAETALLL*LSVTLA
Trigger: GGCTAATGTGACAGACAGCAACAAGAGTAAGGCAGT...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCGTTAACATGCGCTGCTaGGTTTTCATTGTCATCTGC +
Preference number: 5 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRVNMRC*VFIVIC
Trigger: GCAGATGACAATGAAAACCAAGCAGCGCATGTTAAC...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAATGGTGTCTGTGAAGTaGTTCTCGCCAGTAACTGCT +
Preference number: 5 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEMVSVK*FSPVTA
Trigger: AGCAGTTACTGGCGAGAACAACTTCACAGACACCAT...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGCATCACTACAAAAAGTaGGTGCCGAGCCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKHHYKK*VPSHCL
Trigger: CAGACAGTGGCTCGGCACCAACTTTTTGTAGTGATG...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTGGGTGGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGACTGAAGGAGGTCTCTaGGATGACACTCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: LGGLVFNFLVLQGILHKLTEGGL*DDTLNW
Trigger: CCAGTTCAGAGTGTCATCCAAGAGACCTCCTTCAGT...CAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAGTTGTGGTTGCTGTTTaGGGGAATGATGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: GLVFNFLVLQGILHKLATVVVAV*GNDGAA
Trigger: TGCAGCCCCATCATTCCCCAAAACAGCAACCACAAC...TGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCCCACAAACCCAGGAGTaGTGGTTGCTGTTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESPQTQE*WLLFWG
Trigger: TCCCCAAAACAGCAACCACAACTCCTGGGTTTGTGG...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCGCAGGACAGAAACTCTaGCGTGTGTCCACAAACCCA +
Preference number: 5 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIAGQKL*RVSTNP
Trigger: TGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTGC...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAGTGCTGCTCACTGGTTaGGTTTCGGAGCTATTTATA +
Preference number: 5 (lower is better)
Translates to: RSARDLTQAGYKSGGSNTVLLTG*VSELFI
Trigger: TATAAATAGCTCCGAAACCAAACCAGTGAGCAGCAC...TGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGTGGGGCAGTCTTTACTaGGCCTCTCCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKWGSLY*ASPSSS
Trigger: AGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCCA...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCGTGAGCATGTCCAACTaGGGGCAGTCTTTACTTGGC +
Preference number: 5 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESVSMSN*GQSLLG
Trigger: GCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCAC...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGTTGGGGAGGAGAAATTaGGAGTCTCTGGTGTCGACG +
Preference number: 5 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKLGRRN*ESLVST
Trigger: CGTCGACACCAGAGACTCCAAATTTCTCCTCCCCAA...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTTTGGGGAGGAGAAATTaGGAGTCTCTGGTGTCGACG +
Preference number: 5 (lower is better)
Translates to: SVCSSEPLWMFPELGTDSLGRRN*ESLVST
Trigger: CGTCGACACCAGAGACTCCAAATTTCTCCTCCCCAA...AGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTTATAAACTGCAACAAATCCTCCACCCTCCGATGGTCAACGACGCTTTCCCTTTTCCCATTCACCTCCTaGGGGAGGAGAAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: FINCNKSSTLRWSTTLSLFPFTS*GRRNLE
Trigger: CTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAA...AAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACTTTGACTTTTCGTCCTaGATGTGGTTCAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: RELLFQSDSTELQSKESHFDFSS*MWFSCF
Trigger: AAAGCAGCTGAACCACATCAAGGACGAAAAGTCAAA...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCATCTTGTTCTTGCCCTTaGGCTGAGGGGACTCTGCCA +
Preference number: 5 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLASCSCP*AEGTLP
Trigger: TGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAGA...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATGTTGATAGACAGTCTTaGTCGGGTCTGTCTAGCAGA +
Preference number: 5 (lower is better)
Translates to: NFLVLQGILHKLATSQGDVDRQS*SGLSSR
Trigger: TCTGCTAGACAGACCCGACAAAGACTGTCTATCAAC...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS CCA 90 bp AACTCAAAAACTACAAGAGTTAATGCCGGCATCTGGCGAGATGACTaGTCACAGGGCATCTCCATTTTCCCAGTTTCCAGCATGAATGCT +
Preference number: 5 (lower is better)
Translates to: NSKTTRVNAGIWRDD*SQGISIFPVSSMNA
Trigger: AGCATTCATGCTGGAAACTGGGAAAATGGAGATGCCCTGTGACCAGTCATCTCGCCAGATGCCGGCATTAACTCTTGTAGTTTTTGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513350.2
CDS CCA 90 bp GATTCAAGACTCAACTCAAAAACTACAAGAGTTAATGCCGGCATCTaGCGAGATGACTGGTCACAGGGCATCTCCATTTTCCCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: DSRLNSKTTRVNAGI*RDDWSQGISIFPVS
Trigger: GGAAACTGGGAAAATGGAGATGCCCTGTGACCAGTCATCTCGCCAGATGCCGGCATTAACTCTTGTAGTTTTTGAGTTGAGTCTTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513350.2
CDS-3UTR CAA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAGCAACTGCCTTACTCTaGTTGCTGTCTGTCACATTA +
Preference number: 5 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEATALL*LLSVTL
Trigger: TAATGTGACAGACAGCAACAAGAGTAAGGCAGTTGC...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCCACATACTCTCGAGCTaGCTGTTCCAGACGCTGGTA +
Preference number: 5 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSHILSS*LFQTLV
Trigger: TACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGTG...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCACACATACTCTCGAGCTaGCTGTTCCAGACGCTGGTA +
Preference number: 5 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAHILSS*LFQTLV
Trigger: TACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGTG...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CTGGGTGGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTGCTTGGTTTTCATaGTCATCTGCTCGTCGACAT +
Preference number: 5 (lower is better)
Translates to: LGGLVFNFLVLQGILHKLAAWFS*SSARRH
Trigger: ATGTCGACGAGCAGATGACAATGAAAACCAAGCAGC...CAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGGTTAACATGCGCTGCTaGGTTTTCATTGTCATCTGC +
Preference number: 5 (lower is better)
Translates to: TQTAQRVHSETVDCGEQRVNMRC*VFIVIC
Trigger: GCAGATGACAATGAAAACCAAGCAGCGCATGTTAAC...CCTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAGTTAACATGCGCTGCTaGGTTTTCATTGTCATCTGC +
Preference number: 5 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEVNMRC*VFIVIC
Trigger: GCAGATGACAATGAAAACCAAGCAGCGCATGTTAAC...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCATCACTACAAAAAGTaGGTGCCGAGCCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKHHYKK*VPSHCL
Trigger: CAGACAGTGGCTCGGCACCAACTTTTTGTAGTGATG...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GAAGAGGTTTCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCATGGATTCCATTCATGTaGGCCACCACCTCGGTATCA +
Preference number: 5 (lower is better)
Translates to: EEVSGSSVCSSEPLWMFPWIPFM*ATTSVS
Trigger: TGATACCGAGGTGGTGGCCAACATGAATGGAATCCA...TGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCACAAGTGTTTGGAGCTaGTTCAGCCTGCTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESTSVWS*FSLLCW
Trigger: CCAACACAGCAGGCTGAACAAGCTCCAAACACTTGT...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCACAAGTGTTTGGAGCTaGTTCAGCCTGCTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRITSVWS*FSLLCW
Trigger: CCAACACAGCAGGCTGAACAAGCTCCAAACACTTGT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTTGGCCTCTCCTTGACATTCACAAGTGTTaGGAGCTTGTTCAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: EISSEHVQLGAVFTWPLLDIHKC*ELVQPA
Trigger: AGCAGGCTGAACAAGCTCCAAACACTTGTGAATGTC...AAGGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTGCTCGCTTCGCTGCACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTACGGATAAATATGGTCTaGAAGAGATGCATTGAATAC +
Preference number: 5 (lower is better)
Translates to: LLASLHACCSLVWFRSYLRINMV*KRCIEY
Trigger: GTATTCAATGCATCTCTTCAAGACCATATTTATCCG...TAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAACTCTGAACTGGCTGTaGCTGGACTGCACTGTGGTA +
Preference number: 5 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLATLNWL*LDCTVV
Trigger: TACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGT...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCACTGAAGGAGGTCTCTaGGATGACACTCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESTEGGL*DDTLNW
Trigger: CCAGTTCAGAGTGTCATCCAAGAGACCTCCTTCAGT...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGACTGAAGGAGGTCTCTaGGATGACACTCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKTEGGL*DDTLNW
Trigger: CCAGTTCAGAGTGTCATCCAAGAGACCTCCTTCAGT...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCCTCCACCCTCCGATGACCCAGGAGTTGTGGTaGCTGTTTTGGGGAATGATG +
Preference number: 5 (lower is better)
Translates to: WFGFGAIYKLQQILHPPMTQELW*LFWGMM
Trigger: CATCATTCCCCAAAACAGCAACCACAACTCCTGGGT...CATCGGAGGGTGGAGGATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCAGAAGTGCTGCTCACTGGTTaGGTTTCGGAGCTATTTATA +
Preference number: 5 (lower is better)
Translates to: GPVDRQSLSGLSSRIQAEVLLTG*VSELFI
Trigger: TATAAATAGCTCCGAAACCAAACCAGTGAGCAGCAC...TTCTGCTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp ATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTGCTGCTCACTGGTTaGGTTTCGGAGCTATTTATA +
Preference number: 5 (lower is better)
Translates to: ILHKLATSQGDQTQTAQRVLLTG*VSELFI
Trigger: TATAAATAGCTCCGAAACCAAACCAGTGAGCAGCAC...ACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCCTCCTCCAGCTTCCTTaGCTTATGCCTTGCTCGCTT +
Preference number: 5 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSLLQLP*LMPCSL
Trigger: AAGCGAGCAAGGCATAAGCAAAGGAAGCTGGAGGAG...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCTGGGGCAGTCTTTACTaGGCCTCTCCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LKLDQLIDSLCRVCLAESWGSLY*ASPSSS
Trigger: AGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCCA...GGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCTTCCCATTCACCTCCTaGGGGAGGAGAAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIFPFTS*GRRNLE
Trigger: CTCCAAATTTCTCCTCCCCAAGGAGGTGAATGGGAA...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GCACAGAGCTACAATCGAAGGAGTCTCACGCACAGACTACACGCACACGAGCTATCATCAATTGAATTGTaGACTCTGTCTCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: AQSYNRRSLTHRLHAHELSSIEL*TLSPFF
Trigger: GAAGAAAGGAGACAGAGTCAACAATTCAATTGATGA...TAGCTCGTGTGCGTGTAGTCTGTGCGTGAGACTCCTTCGATTGTAGCTCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAGCAACTGCCTTACTCTaGTTGCTGTCTGTCACATTA +
Preference number: 5 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQATALL*LLSVTL
Trigger: TAATGTGACAGACAGCAACAAGAGTAAGGCAGTTGC...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
CDS-3UTR CAA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCGCTGCTTGGTTTTCATaGTCATCTGCTCGTCGACAT +
Preference number: 5 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQIAAWFS*SSARRH
Trigger: ATGTCGACGAGCAGATGACAATGAAAACCAAGCAGC...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATGGATTCCATTCATGTaGGCCACCACCTCGGTATCA +
Preference number: 5 (lower is better)
Translates to: KLKLDQLIDSLCRVCLAEWIPFM*ATTSVS
Trigger: TGATACCGAGGTGGTGGCCAACATGAATGGAATCCA...TTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCGACATTCACAAGTGTTaGGAGCTTGTTCAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIDIHKC*ELVQPA
Trigger: AGCAGGCTGAACAAGCTCCAAACACTTGTGAATGTC...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CGGGAACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACCGGATAAATATGGTCTaGAAGAGATGCATTGAATAC +
Preference number: 5 (lower is better)
Translates to: RELLFQSDSTELQSKESHRINMV*KRCIEY
Trigger: GTATTCAATGCATCTCTTCAAGACCATATTTATCCG...GTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTTCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCATGGGGCTGCAAGATTaGCAAGGTGAGGTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: SSISTLSRSISLGRKTSSMGLQD*QGEVWR
Trigger: CCTCCACACCTCACCTTGCAAATCTTGCAGCCCCAT...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CAA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTATGCTCCTCTTTCCTCTaGGTCAGCCGTAAGCGAAGC +
Preference number: 5 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLCSSFL*VSRKRS
Trigger: GCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGCA...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCTGCTCCTCTTTCCTCTaGGTCAGCCGTAAGCGAAGC +
Preference number: 5 (lower is better)
Translates to: SSISTLSRSISLGRKTSSCSSFL*VSRKRS
Trigger: GCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGCA...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CAA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCATGGGGCAGTCTTTACTaGGCCTCTCCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAWGSLY*ASPSSS
Trigger: AGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCCCA...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCAAACACAAACAGCGCCCATCAATTGAATTGTaGACTCTGTCTCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: KGSYTSWLQVRGIKHKQRPSIEL*TLSPFF
Trigger: GAAGAAAGGAGACAGAGTCAACAATTCAATTGATGG...GCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324666.9
CDS-3UTR CAA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATTCCAAGCAGAACCTTTaGAAATATTCCACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: NFLVLQGILHKLATSQGDSKQNL*KYSTSL
Trigger: GAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGA...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCGTTGATAGACAGTCTTaGTCGGGTCTGTCTAGCAGA +
Preference number: 5 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQIVDRQS*SGLSSR
Trigger: TCTGCTAGACAGACCCGACAAAGACTGTCTATCAAC...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAAGGAGTACTGGGTGGGCTaGTTTTTAACTTTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: NTNSATCTLGDSRLWRTKEYWVG*FLTFSF
Trigger: GAACGAGAAAGTTAAAAACAAGCCCACCCAGTACTC...CTTTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCTACAAGTCAGGGGGATCAAACACAAACAGCGCAACGTGTACACTCGGAGACATCATCAATTGAATTGTaGACTCTGTCTCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: ATSQGDQTQTAQRVHSETSSIEL*TLSPFF
Trigger: GAAGAAAGGAGACAGAGTCAACAATTCAATTGATGA...TGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTGATCCCCCTGACTTGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGCTGCATAATTTCTACTaGTTGGTGCAGCTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKLHNFY*LVQLEA
Trigger: AGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAG...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS GCA 90 bp TACTCTCGCCGTCCGCTTCTTCATCATCAGCTTCTGAGGAACTACTaGTGGTACTGCTTATCTGAGGAGACTTTAAAGACAATCTTTTGT +
Preference number: 5 (lower is better)
Translates to: YSRRPLLHHQLLRNY*WYCLSEETLKTIFC
Trigger: ACAAAAGATTGTCTTTAAAGTCTCCTCAGATAAGCAGTACCAGCAGTAGTTCCTCAGAAGCTGATGATGAAGAAGCGGACGGCGAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506904.1
CDS-3UTR CAA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGCTGCTTGGTTTTCATaGTCATCTGCTCGTCGACAT +
Preference number: 5 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAAAWFS*SSARRH
Trigger: ATGTCGACGAGCAGATGACAATGAAAACCAAGCAGC...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp AAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCAAGGTTAACATGCGCTGCTaGGTTTTCATTGTCATCTGC +
Preference number: 5 (lower is better)
Translates to: KLDQLIDSLCRVCLAESKVNMRC*VFIVIC
Trigger: GCAGATGACAATGAAAACCAAGCAGCGCATGTTAAC...CTTGGATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGATGGTGTCTGTGAAGTaGTTCTCGCCAGTAACTGCT +
Preference number: 5 (lower is better)
Translates to: VFNFLVLQGILHKLATSQMVSVK*FSPVTA
Trigger: AGCAGTTACTGGCGAGAACAACTTCACAGACACCAT...CTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGACATTCACAAGTGTTaGGAGCTTGTTCAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: VFNFLVLQGILHKLATSQDIHKC*ELVQPA
Trigger: AGCAGGCTGAACAAGCTCCAAACACTTGTGAATGTC...CTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AACTACTGTTCCAATCCGACAGCACAGAGCTACAATCGAAGGAGTCTCACGCACCGGATAAATATGGTCTaGAAGAGATGCATTGAATAC +
Preference number: 5 (lower is better)
Translates to: NYCSNPTAQSYNRRSLTHRINMV*KRCIEY
Trigger: GTATTCAATGCATCTCTTCAAGACCATATTTATCCG...GTGCGTGAGACTCCTTCGATTGTAGCTCTGTGCTGTCGGATTGGAACAGTAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp CTGGGTGGGCTTGTTTTTAACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGTTGTTTCTGAGAGTGTaGGCCCTAATATTTCACTCC +
Preference number: 5 (lower is better)
Translates to: LGGLVFNFLVLQGILHKLLFLRV*ALIFHS
Trigger: GGAGTGAAATATTAGGGCCAACACTCTCAGAAACAA...CAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTTAAAAACAAGCCCACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGTTGTGGTTGCTGTTTaGGGGAATGATGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLVVVAV*GNDGAA
Trigger: TGCAGCCCCATCATTCCCCAAAACAGCAACCACAAC...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTACCACAAACCCAGGAGTaGTGGTTGCTGTTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLPQTQE*WLLFWG
Trigger: TCCCCAAAACAGCAACCACAACTCCTGGGTTTGTGG...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGTTGATAGACAGTCTTaGTCGGGTCTGTCTAGCAGA +
Preference number: 5 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAVDRQS*SGLSSR
Trigger: TCTGCTAGACAGACCCGACAAAGACTGTCTATCAAC...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TCTAGCAGAATCCAAGCAGAACCTTTTGAAATATTCCACTTCCCTCTCTGTCTCGTTGATAGACAGTCTTaGTCGGGTCTGTCTAGCAGA +
Preference number: 5 (lower is better)
Translates to: SSRIQAEPFEIFHFPLCLVDRQS*SGLSSR
Trigger: TCTGCTAGACAGACCCGACAAAGACTGTCTATCAAC...GAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp ACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCTCATCAATTGAATTGTaGACTCTGTCTCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: TFSFCKGSYTSWLQVRGISSIEL*TLSPFF
Trigger: GAAGAAAGGAGACAGAGTCAACAATTCAATTGATGA...GATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCATAATTTCTACTTGTaGGTGCAGCTGGAGGCTCAT +
Preference number: 5 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIHNFYL*VQLEAH
Trigger: ATGAGCCTCCAGCTGCACCAACAAGTAGAAATTATG...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CAA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGCAACTGCCTTACTCTaGTTGCTGTCTGTCACATTA +
Preference number: 5 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAATALL*LLSVTL
Trigger: TAATGTGACAGACAGCAACAAGAGTAAGGCAGTTGC...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp CAAACACAAACAGCGCAACGTGTACACTCGGAGACAGTAGATTGTGGAGAACAAATACCTGATGCTTATTaGTGTGATTCTGAACAGGTG +
Preference number: 5 (lower is better)
Translates to: QTQTAQRVHSETVDCGEQIPDAY*CDSEQV
Trigger: CACCTGTTCAGAATCACACAAATAAGCATCAGGTAT...TTGTTCTCCACAATCTACTGTCTCCGAGTGTACACGTTGCGCTGTTTGTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp AACTTTCTCGTTCTGCAAGGGATCTTACACAAGCTGGCTACAAGTCAGGGGGATCGGATAAATATGGTCTaGAAGAGATGCATTGAATAC +
Preference number: 5 (lower is better)
Translates to: NFLVLQGILHKLATSQGDRINMV*KRCIEY
Trigger: GTATTCAATGCATCTCTTCAAGACCATATTTATCCG...ATCCCCCTGACTTGTAGCCAGCTTGTGTAAGATCCCTTGCAGAACGAGAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000512465.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TGGAAATTTCTAGTGAGCATGTCCAACTTGGGGCAGTCTTTACTTGGCCTCTCCCGGATAAATATGGTCTaGAAGAGATGCATTGAATAC +
Preference number: 5 (lower is better)
Translates to: WKFLVSMSNLGQSLLGLSRINMV*KRCIEY
Trigger: GTATTCAATGCATCTCTTCAAGACCATATTTATCCG...GGAGAGGCCAAGTAAAGACTGCCCCAAGTTGGACATGCTCACTAGAAATTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp ACGCGTGCTGCTCACTGGTTTGGTTTCGGAGCTATTTATAAACTGCAACAAATCTTGTTTCTGAGAGTGTaGGCCCTAATATTTCACTCC +
Preference number: 5 (lower is better)
Translates to: TRAAHWFGFGAIYKLQQILFLRV*ALIFHS
Trigger: GGAGTGAAATATTAGGGCCAACACTCTCAGAAACAA...GATTTGTTGCAGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TCTGGTTCTTCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGATTGTTTCTGAGAGTGTaGGCCCTAATATTTCACTCC +
Preference number: 5 (lower is better)
Translates to: SGSSVCSSEPLWMFPELGLFLRV*ALIFHS
Trigger: GGAGTGAAATATTAGGGCCAACACTCTCAGAAACAA...TCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGAAGAACCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTACTGCATAATTTCTACTaGTTGGTGCAGCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLLHNFY*LVQLEA
Trigger: GGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAG...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505311.5
ENST00000512465.5
CDS-3UTR CAA 90 bp TCAGTTTGCTCTAGTGAGCCATTGTGGATGTTTCCAGAGTTAGGAACAGACTCTCTAAAATTGGACCAGTaGATAGACAGTCTTTGTCGG +
Preference number: 5 (lower is better)
Translates to: SVCSSEPLWMFPELGTDSLKLDQ*IDSLCR
Trigger: CCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG...AGAGTCTGTTCCTAACTCTGGAAACATCCACAATGGCTCACTAGAGCAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAAACCCCGTCTCTTTaGAAATATTCCACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAETPSL*KYSTSL
Trigger: GAGGGAAGTGGAATATTTCAAAAGAGACGGGGTTTC...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505311.5
CDS-3UTR CAA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCACCATGCCAATTGAATaGTTGACTCTGTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRITMPIE*LTLSPF
Trigger: GAAAGGAGACAGAGTCAACAATTCAATTGGCATGGT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CAA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCATACCTGATGCTTATTaGTGTGATTCTGAACAGGTG +
Preference number: 5 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIIPDAY*CDSEQV
Trigger: CACCTGTTCAGAATCACACAAATAAGCATCAGGTAT...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCTTGTTTCTGAGAGTGTaGGCCCTAATATTTCACTCC +
Preference number: 5 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSLFLRV*ALIFHS
Trigger: GGAGTGAAATATTAGGGCCAACACTCTCAGAAACAA...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCTTTGACTTTTCGTCCTaGATGTGGTTCAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSFDFSS*MWFSCF
Trigger: AAAGCAGCTGAACCACATCAAGGACGAAAAGTCAAA...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCACTAAAATTGGACCAGTaGATAGACAGTCTTTGTCGG +
Preference number: 5 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLALKLDQ*IDSLCR
Trigger: CCGACAAAGACTGTCTATCAACTGGTCCAATTTTAG...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS TCA 90 bp TATTCCCAAAACAGCTCGGATAAATATGGTCTTGAAGAGATGCATTaGATACCTGATGCTTATTTGTGTGATTCTGAACAGGTGCTGGCG +
Preference number: 5 (lower is better)
Translates to: YSQNSSDKYGLEEMH*IPDAYLCDSEQVLA
Trigger: CGCCAGCACCTGTTCAGAATCACACAAATAAGCATCAGGTATTCAATGCATCTCTTCAAGACCATATTTATCCGAGCTGTTTTGGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 90 bp TTGGCCCTAATATTTCACTCCCAGAAATTGTATCTGGCAAGAAAGTaGCAGGATTCCAGTTCTTATCATTCATCACTTCTGATCCCCAAA +
Preference number: 5 (lower is better)
Translates to: LALIFHSQKLYLARK*QDSSSYHSSLLIPK
Trigger: TTTGGGGATCAGAAGTGATGAATGATAAGAACTGGAATCCTGGCACTTTCTTGCCAGATACAATTTCTGGGAGTGAAATATTAGGGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS-3UTR CAA 90 bp TTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCATACCTGATGCTTATTaGTGTGATTCTGAACAGGTG +
Preference number: 5 (lower is better)
Translates to: FQAKIGPVDRQSLSGLSSIPDAY*CDSEQV
Trigger: CACCTGTTCAGAATCACACAAATAAGCATCAGGTAT...GCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp GCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAGAATCCGGATAAATATGGTCTaGAAGAGATGCATTGAATAC +
Preference number: 5 (lower is better)
Translates to: AKIGPVDRQSLSGLSSRIRINMV*KRCIEY
Trigger: GTATTCAATGCATCTCTTCAAGACCATATTTATCCG...GATTCTGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
CDS-3UTR CAA 90 bp TTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTAGCAATGCCAATTGAATTGTaGACTCTGTCTCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: FKLKLDQLIDSLCRVCLAMPIEL*TLSPFF
Trigger: GAAGAAAGGAGACAGAGTCAACAATTCAATTGGCAT...TGCTAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS GCA 90 bp TGGAGTATTCCCAAAACAGCTCGGATAAATATGGTCTTGAAGAGATaGATTGAATACCTGATGCTTATTTGTGTGATTCTGAACAGGTGC +
Preference number: 5 (lower is better)
Translates to: WSIPKTARINMVLKR*IEYLMLICVILNRC
Trigger: GCACCTGTTCAGAATCACACAAATAAGCATCAGGTATTCAATGCATCTCTTCAAGACCATATTTATCCGAGCTGTTTTGGGAATACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 90 bp CCTCGGTATCATCATAATTACTCAATGGATAAATATCAGCAAATTTaGCTGACAATGGTGCAACATCTTCATCATCAAAAGTTGGTGCCG +
Preference number: 5 (lower is better)
Translates to: PRYHHNYSMDKYQQI*LTMVQHLHHQKLVP
Trigger: CGGCACCAACTTTTGATGATGAAGATGTTGCACCATTGTCAGCCAAATTTGCTGATATTTATCCATTGAGTAATTATGATGATACCGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502458.5
CDS-3UTR CAA 90 bp TCATCCATATCCACACTGTCTAGGTCAATATCTTTAGGTAGAAAGACATCATCCATACCTGATGCTTATTaGTGTGATTCTGAACAGGTG +
Preference number: 5 (lower is better)
Translates to: SSISTLSRSISLGRKTSSIPDAY*CDSEQV
Trigger: CACCTGTTCAGAATCACACAAATAAGCATCAGGTAT...GGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGTGTGGATATGGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS-3UTR CAA 90 bp TTTTTCAAGCTAAAATTGGACCAGTTGATAGACAGTCTTTGTCGGGTCTGTCTATCATCAATTGAATTGTaGACTCTGTCTCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: FFKLKLDQLIDSLCRVCLSSIEL*TLSPFF
Trigger: GAAGAAAGGAGACAGAGTCAACAATTCAATTGATGA...TAGACAGACCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505311.5
ENST00000512465.5
CDS CCA 90 bp CCTCGGTATCATCATAATTACTCAATGGATAAATATCAGCAAATTTaGCTGACAATGGTGCAACATCTTCATCATCACTACAAAAAGTTG +
Preference number: 5 (lower is better)
Translates to: PRYHHNYSMDKYQQI*LTMVQHLHHHYKKL
Trigger: CAACTTTTTGTAGTGATGATGAAGATGTTGCACCATTGTCAGCCAAATTTGCTGATATTTATCCATTGAGTAATTATGATGATACCGAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000505311.5
ENST00000506904.1
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp GCGGCGGGCCCTGCAGGCCAGATGGTGCCTTCACCTTaGCCGCAGCCGACAGCTGCCGGAGCAGGCGGACCT +
Preference number: 6 (lower is better)
Translates to: AAGPAGQMVPSP*PQPTAAGAGGP
Trigger: AGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 72 bp TGCGGCGGGCCCTGCAGGCCAGATGGTGCCTTCACCTaGGCCGCAGCCGACAGCTGCCGGAGCAGGCGGACC +
Preference number: 6 (lower is better)
Translates to: CGGPCRPDGAFT*AAADSCRSRRT
Trigger: GGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp CTGGTGCGCTTGCGGCGGGCCCTGCAGGCCAGATGGTaGCTTCACCTTGGCCGCAGCCGACAGCTGCCGGAG +
Preference number: 6 (lower is better)
Translates to: LVRLRRALQARW*LHLGRSRQLPE
Trigger: CTCCGGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp GAACTGGTGCGCTTGCGGCGGGCCCTGCAGGCCAGATaGTGCCTTCACCTTGGCCGCAGCCGACAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: ELVRLRRALQAR*CLHLGRSRQLP
Trigger: CGGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 90 bp TGGTGCGCTTGCGGCGGGCCCTGCAGGCCAGATGGTGCCTTCACCTaGGCCGCAGCCGACAGCTGCCGGAGCAGGCGGACCTTCATCTCC +
Preference number: 6 (lower is better)
Translates to: WCACGGPCRPDGAFT*AAADSCRSRRTFIS
Trigger: GGAGATGAAGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS TCA 72 bp GGCAGAGGGCGCCGTACTCCTCAAGCAGGAGGGAGATaGACTGGTGCGCTTGCGGCGGGCCCTGCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: GRGRRTPQAGGR*TGALAAGPAGQ
Trigger: CTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGAGGAGTACGGCGCCCTCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp GCAGCGTCTGTGCACCCAGAGCGAGCCTCCCACCACTaGCGGCCTCTGGCTGGGAGCCACCAAGCGAGGAGT +
Preference number: 6 (lower is better)
Translates to: AASVHPERASHH*RPLAGSHQARS
Trigger: ACTCCTCGCTTGGTGGCTCCCAGCCAGAGGCCGGCAGTGGTGGGAGGCTCGCTCTGGGTGCACAGACGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS CAA 90 bp GAGGGCGCCGTACTCCTCAAGCAGGAGGGAGATGAACTGGTGCGCTaGCGGCGGGCCCTGCAGGCCAGATGGTGCCTTCACCTTGGCCGC +
Preference number: 6 (lower is better)
Translates to: EGAVLLKQEGDELVR*RRALQARWCLHLGR
Trigger: GCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGAGGAGTACGGCGCCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS TCA 72 bp GCGCTCACTGCAGGCCTCGCACGAGCATGCGGTGTCTaGAGGCAGCGTCTGTGCACCCAGAGCGAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: ALTAGLARACGV*RQRLCTQSEPP
Trigger: GGGAGGCTCGCTCTGGGTGCACAGACGCTGCCTTCAGACACCGCATGCTCGTGCGAGGCCTGCAGTGAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS GCA 72 bp AGGAGGGAGATGAACTGGTGCGCTTGCGGCGGGCCCTaGAGGCCAGATGGTGCCTTCACCTTGGCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: RREMNWCACGGP*RPDGAFTLAAA
Trigger: GGCTGCGGCCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp GCGCCGTACTCCTCAAGCAGGAGGGAGATGAACTGGTaGGCTTGCGGCGGGCCCTGCAGGCCAGATGGTGCC +
Preference number: 6 (lower is better)
Translates to: APYSSSRREMNW*ACGGPCRPDGA
Trigger: GGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGAGGAGTACGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp AGGGCGCCGTACTCCTCAAGCAGGAGGGAGATGAACTaGTGCGCTTGCGGCGGGCCCTGCAGGCCAGATGGT +
Preference number: 6 (lower is better)
Translates to: RAPYSSSRREMN*CACGGPCRPDG
Trigger: ACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGAGGAGTACGGCGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp AGAGTGCCAAGGAAGGTGCTGATGGAGCGTGCGGCCTaGCAGAGGGCGCCGTACTCCTCAAGCAGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: RVPRKVLMERAA*QRAPYSSSRRE
Trigger: CTCCCTCCTGCTTGAGGAGTACGGCGCCCTCTGCCAGGCCGCACGCTCCATCAGCACCTTCCTTGGCACTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS TCA 72 bp GGAGGAACCGCGAGTCCACAGTCCCGGCGCCGCGGCTaGCCAGAGTTAGAGTCCAATATGGCGGACACAAGG +
Preference number: 6 (lower is better)
Translates to: GGTASPQSRRRG*PELESNMADTR
Trigger: CCTTGTGTCCGCCATATTGGACTCTAACTCTGGTCAGCCGCGGCGCCGGGACTGTGGACTCGCGGTTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS GCA 72 bp CTCCTTGTCAGGCACCAGAGACTGGTCCTGGTCATCTaGCAGCGGGGTTCCTGCCTGGCGGTAGATGCAGCG +
Preference number: 6 (lower is better)
Translates to: LLVRHQRLVLVI*QRGSCLAVDAA
Trigger: CGCTGCATCTACCGCCAGGCAGGAACCCCGCTGGCAGATGACCAGGACCAGTCTCTGGTGCCTGACAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp CCAGATGGTGCCTTCACCTTGGCCGCAGCCGACAGCTaGCGGAGCAGGCGGACCTTCATCTCCAGCACATAC +
Preference number: 6 (lower is better)
Translates to: PDGAFTLAAADS*RSRRTFISSTY
Trigger: GTATGTGCTGGAGATGAAGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGGCCAAGGTGAAGGCACCATCTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp TACTCCTCAAGCAGGAGGGAGATGAACTGGTGCGCTTaGGGCGGGCCCTGCAGGCCAGATGGTGCCTTCACC +
Preference number: 6 (lower is better)
Translates to: YSSSRREMNWCA*GGPCRPDGAFT
Trigger: GGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGAGGAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp TCCTCTTCTGGCACTCCAGCCACTCCTCGGCGACTCTaGGCAGCTCCTCCTCGGAACGCTGGTACCTCTGCA +
Preference number: 6 (lower is better)
Translates to: SSSGTPATPRRL*AAPPRNAGTSA
Trigger: TGCAGAGGTACCAGCGTTCCGAGGAGGAGCTGCGCAGAGTCGCCGAGGAGTGGCTGGAGTGCCAGAAGAGGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 72 bp GTACTCCTCAAGCAGGAGGGAGATGAACTGGTGCGCTaGCGGCGGGCCCTGCAGGCCAGATGGTGCCTTCAC +
Preference number: 6 (lower is better)
Translates to: VLLKQEGDELVR*RRALQARWCLH
Trigger: GTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGAGGAGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 90 bp GGGTCCCTCTCGCAGAGCCTATCCACGAGCTCCTTCACTCCCTCCTaGTCAGGCACCAGAGACTGGTCCTGGTCATCTGCCAGCGGGGTT +
Preference number: 6 (lower is better)
Translates to: GSLSQSLSTSSFTPS*SGTRDWSWSSASGV
Trigger: AACCCCGCTGGCAGATGACCAGGACCAGTCTCTGGTGCCTGACAAGGAGGGAGTGAAGGAGCTCGTGGATAGGCTCTGCGAGAGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS TCA 72 bp GATGGGAGAGCTGGAGCCGGACCCCGAGCTTGCAGATaGCACACTGGGCGGGCTCCTCTCAGCAAGATAGTC +
Preference number: 6 (lower is better)
Translates to: DGRAGAGPRACR*HTGRAPLSKIV
Trigger: GACTATCTTGCTGAGAGGAGCCCGCCCAGTGTGTCATCTGCAAGCTCGGGGTCCGGCTCCAGCTCTCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000506904.1
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp GGTCATCTGCCAGCGGGGTTCCTGCCTGGCGGTAGATaGAGCGCACCGTGTAGCGCACTTCTGACCAGTAGT +
Preference number: 6 (lower is better)
Translates to: GHLPAGFLPGGR*SAPCSALLTSS
Trigger: ACTACTGGTCAGAAGTGCGCTACACGGTGCGCTGCATCTACCGCCAGGCAGGAACCCCGCTGGCAGATGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp AGCTCCTTCACTCCCTCCTTGTCAGGCACCAGAGACTaGTCCTGGTCATCTGCCAGCGGGGTTCCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: SSFTPSLSGTRD*SWSSASGVPAW
Trigger: CCAGGCAGGAACCCCGCTGGCAGATGACCAGGACCAGTCTCTGGTGCCTGACAAGGAGGGAGTGAAGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp AGCTGGAGCCGGACCCCGAGCTTGCAGATGACACACTaGGCGGGCTCCTCTCAGCAAGATAGTCAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: SWSRTPSLQMTH*AGSSQQDSQEQ
Trigger: CTGCTCCTGACTATCTTGCTGAGAGGAGCCCGCCCAGTGTGTCATCTGCAAGCTCGGGGTCCGGCTCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000506904.1
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 90 bp CTGCCGGAGCAGGCGGACCTTCATCTCCAGCACATACTCTCGAGCTaGCTGTTCCAGACGCTGGTACAGCTGGTAGGGGTCCCTCTCGCA +
Preference number: 6 (lower is better)
Translates to: LPEQADLHLQHILSS*LFQTLVQLVGVPLA
Trigger: TGCGAGAGGGACCCCTACCAGCTGTACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGTGCTGGAGATGAAGGTCCGCCTGCTCCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS TCA 72 bp CTGGCGGTAGATGCAGCGCACCGTGTAGCGCACTTCTaGCCAGTAGTTCTGCAGCTGCTGAGGTTCCCGGTC +
Preference number: 6 (lower is better)
Translates to: LAVDAAHRVAHF*PVVLQLLRFPV
Trigger: GACCGGGAACCTCAGCAGCTGCAGAACTACTGGTCAGAAGTGCGCTACACGGTGCGCTGCATCTACCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS TCA 72 bp GGGCGGCTGGGGCCGAGTGTCTGTGGTCCTCCTTGCTaGTGCCATGAAACACGTCACCTACTGAAGGAGGTC +
Preference number: 6 (lower is better)
Translates to: GRLGPSVCGPPC*CHETRHLLKEV
Trigger: GACCTCCTTCAGTAGGTGACGTGTTTCATGGCATCAGCAAGGAGGACCACAGACACTCGGCCCCAGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp AGCTGGAGGCCTCCTTCTGGTTGGTGGAGGTCGAGGTaGTGGAGCTGTGCTCAGAGCAGCTGTCCTCATCTG +
Preference number: 6 (lower is better)
Translates to: SWRPPSGWWRSR*WSCAQSSCPHL
Trigger: CAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGGCCTCCAGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS GCA 72 bp GTAGTTCTGCAGCTGCTGAGGTTCCCGGTCCGCCTCTaGCGAAATTTCTCTGCGCTCACTGCAGGCCTCGCA +
Preference number: 6 (lower is better)
Translates to: VVLQLLRFPVRL*RNFSALTAGLA
Trigger: TGCGAGGCCTGCAGTGAGCGCAGAGAAATTTCGGCAGAGGCGGACCGGGAACCTCAGCAGCTGCAGAACTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637812.2
CDS CCA 72 bp TGGAGGCCTCCTTCTGGTTGGTGGAGGTCGAGGTGCTaGAGCTGTGCTCAGAGCAGCTGTCCTCATCTGCAC +
Preference number: 6 (lower is better)
Translates to: WRPPSGWWRSRC*SCAQSSCPHLH
Trigger: GTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGGCCTCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS GCA 72 bp CTGTGGCCGGGGGTAGGGGTGCAGGACAGAAACTCTTaGGTGTGTCCACAAACCCAGGAGTTGTGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: LWPGVGVQDRNS*VCPQTQELWLL
Trigger: CAGCAACCACAACTCCTGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTGCACCCCTACCCCCGGCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp GGTGCTGGAGCTGTGCTCAGAGCAGCTGTCCTCATCTaGACTCTCGTCCCCATCATCCTGCTGTGGGTCGTA +
Preference number: 6 (lower is better)
Translates to: GAGAVLRAAVLI*TLVPIILLWVV
Trigger: TACGACCCACAGCAGGATGATGGGGACGAGAGTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp TCCTTCTGGTTGGTGGAGGTCGAGGTGCTGGAGCTGTaGTCAGAGCAGCTGTCCTCATCTGCACTCTCGTCC +
Preference number: 6 (lower is better)
Translates to: SFWLVEVEVLEL*SEQLSSSALSS
Trigger: GGACGAGAGTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACCAGAAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp GTCCTCATCTGCACTCTCGTCCCCATCATCCTGCTGTaGGTCGTAGACACCATTCTCGCAGCGGTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: VLICTLVPIILL*VVDTILAAVPF
Trigger: GAAGGGCACCGCTGCGAGAATGGTGTCTACGACCCACAGCAGGATGATGGGGACGAGAGTGCAGATGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp ACTTGCCCTCCTTCTGGTTGGTGGAGGTCGAGGTGCTaGAGCTGTGCTCAGAGCAGCTGTCCTCATCTGCAC +
Preference number: 6 (lower is better)
Translates to: TCPPSGWWRSRC*SCAQSSCPHLH
Trigger: GTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGGGCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 72 bp TCGCAGAGCCTATCCACGAGCTCCTTCACTCCCTCCTaGTCAGGCACCAGAGACTGGTCCTGGTCATCTGCC +
Preference number: 6 (lower is better)
Translates to: SQSLSTSSFTPS*SGTRDWSWSSA
Trigger: GGCAGATGACCAGGACCAGTCTCTGGTGCCTGACAAGGAGGGAGTGAAGGAGCTCGTGGATAGGCTCTGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS TCA 72 bp TCAAGTGTTCATTTTCCAGAGTGCCAAGGAAGGTGCTaGTGGAGCGTGCGGCCTGGCAGAGGGCGCCGTACT +
Preference number: 6 (lower is better)
Translates to: SSVHFPECQGRC*WSVRPGRGRRT
Trigger: AGTACGGCGCCCTCTGCCAGGCCGCACGCTCCATCAGCACCTTCCTTGGCACTCTGGAAAATGAACACTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp ACTCTGCGCAGCTCCTCCTCGGAACGCTGGTACCTCTaGAGCAAGGTACTGTATGTGTCCTCACTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: TLRSSSSERWYL*SKVLYVSSLQV
Trigger: CACCTGCAGTGAGGACACATACAGTACCTTGCTGCAGAGGTACCAGCGTTCCGAGGAGGAGCTGCGCAGAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp AGTACTTGCCCTCCTTCTGGTTGGTGGAGGTCGAGGTaGTGGAGCTGTGCTCAGAGCAGCTGTCCTCATCTG +
Preference number: 6 (lower is better)
Translates to: STCPPSGWWRSR*WSCAQSSCPHL
Trigger: CAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACCAGAAGGAGGGCAAGTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 72 bp CAGGCGGACCTTCATCTCCAGCACATACTCTCGAGCTaGCTGTTCCAGACGCTGGTACAGCTGGTAGGGGTC +
Preference number: 6 (lower is better)
Translates to: QADLHLQHILSS*LFQTLVQLVGV
Trigger: GACCCCTACCAGCTGTACCAGCGTCTGGAACAGCAAGCTCGAGAGTATGTGCTGGAGATGAAGGTCCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 72 bp TCTGTGGCCGGGGGTAGGGGTGCAGGACAGAAACTCTaGCGTGTGTCCACAAACCCAGGAGTTGTGGTTGCT +
Preference number: 6 (lower is better)
Translates to: SVAGGRGAGQKL*RVSTNPGVVVA
Trigger: AGCAACCACAACTCCTGGGTTTGTGGACACACGCAAGAGTTTCTGTCCTGCACCCCTACCCCCGGCCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS TCA 72 bp GCACAATCGCTTGAACCTGGGAGGCGAAGGTTGCAGTaGGCCAAGATTGCACCATTGTACCCCAGACTGGGC +
Preference number: 6 (lower is better)
Translates to: AQSLEPGRRRLQ*AKIAPLYPRLG
Trigger: GCCCAGTCTGGGGTACAATGGTGCAATCTTGGCTCACTGCAACCTTCGCCTCCCAGGTTCAAGCGATTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324666.9
CDS GCA 72 bp GGGCAGTCGGGCATGCTCAGCCGGGACGATAACATGTaGCTCATGGTGTCTGTGAAGTTGTTCTCGCCAGTA +
Preference number: 6 (lower is better)
Translates to: GQSGMLSRDDNM*LMVSVKLFSPV
Trigger: TACTGGCGAGAACAACTTCACAGACACCATGAGGCACATGTTATCGTCCCGGCTGAGCATGCCCGACTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp CATGGATGTGAGGGTAAAGGTGCAGTGCAGGGTGTGTaGGCTTCTCTGGGCTCAAGAACTGATGGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: HGCEGKGAVQGV*ASLGSRTDGQE
Trigger: CTCCTGGCCATCAGTTCTTGAGCCCAGAGAAGCCCACACACCCTGCACTGCACCTTTACCCTCACATCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp ATCTTCTCCTGTAGTTGCAGTTGGGGCAGTCGGGCATaGTCAGCCGGGACGATAACATGTGCCTCATGGTGT +
Preference number: 6 (lower is better)
Translates to: IFSCSCSWGSRA*SAGTITCASWC
Trigger: ACACCATGAGGCACATGTTATCGTCCCGGCTGAGCATGCCCGACTGCCCCAACTGCAACTACAGGAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp AGGCACATGTCCATGGATGTGAGGGTAAAGGTGCAGTaGAGGGTGTGTGGGCTTCTCTGGGCTCAAGAACTG +
Preference number: 6 (lower is better)
Translates to: RHMSMDVRVKVQ*RVCGLLWAQEL
Trigger: CAGTTCTTGAGCCCAGAGAAGCCCACACACCCTGCACTGCACCTTTACCCTCACATCCATGGACATGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp CTCTTGGATGACACTCTGAACTGGCTGTTGCTGGACTaGACTGTGGTAGCTGTGCAGGACACAGAGGACGTG +
Preference number: 6 (lower is better)
Translates to: LLDDTLNWLLLD*TVVAVQDTEDV
Trigger: CACGTCCTCTGTGTCCTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp AGTCATCGCAAGCACATCTTCTCCTGTAGTTGCAGTTaGGGCAGTCGGGCATGCTCAGCCGGGACGATAACA +
Preference number: 6 (lower is better)
Translates to: SHRKHIFSCSCS*GSRACSAGTIT
Trigger: TGTTATCGTCCCGGCTGAGCATGCCCGACTGCCCCAACTGCAACTACAGGAGAAGATGTGCTTGCGATGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 90 bp TCACCTACTGAAGGAGGTCTCTTGGATGACACTCTGAACTGGCTGTaGCTGGACTGCACTGTGGTAGCTGTGCAGGACACAGAGGACGTG +
Preference number: 6 (lower is better)
Translates to: SPTEGGLLDDTLNWL*LDCTVVAVQDTEDV
Trigger: CACGTCCTCTGTGTCCTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCTTCAGTAGGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp ATGGCCAGGAGGAAGGGCTCCGGCTGTCATTGCAGATaGTGTCAGTCCAGAAGCTTCCTGCTTACAAACATG +
Preference number: 6 (lower is better)
Translates to: MARRKGSGCHCR*CQSRSFLLTNM
Trigger: CATGTTTGTAAGCAGGAAGCTTCTGGACTGACACCATCTGCAATGACAGCCGGAGCCCTTCCTCCTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp CCTACTGAAGGAGGTCTCTTGGATGACACTCTGAACTaGCTGTTGCTGGACTGCACTGTGGTAGCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: PTEGGLLDDTLN*LLLDCTVVAVQ
Trigger: CTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCTTCAGTAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 72 bp GAAGGAGGTCTCTTGGATGACACTCTGAACTGGCTGTaGCTGGACTGCACTGTGGTAGCTGTGCAGGACACA +
Preference number: 6 (lower is better)
Translates to: EGGLLDDTLNWL*LDCTVVAVQDT
Trigger: TGTGTCCTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp CTCAGCAAGATAGTCAGGAGCAGGATCCACTTGAAGTaGGAGCTGGTGAATGTGGATGTCATCAGTGACGGG +
Preference number: 6 (lower is better)
Translates to: LSKIVRSRIHLK*ELVNVDVISDG
Trigger: CCCGTCACTGATGACATCCACATTCACCAGCTCCCACTTCAAGTGGATCCTGCTCCTGACTATCTTGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp GGACAAGGGTGCCAGTATCAATGCTCTTATTCACACTaGTCTGAAGGTCCTGCTCGTCGACATAGGCGTCGA +
Preference number: 6 (lower is better)
Translates to: GQGCQYQCSYSH*SEGPARRHRRR
Trigger: TCGACGCCTATGTCGACGAGCAGGACCTTCAGACCAGTGTGAATAAGAGCATTGATACTGGCACCCTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502458.5
CDS CCA 72 bp GTGTGTCCACAAACCCAGGAGTTGTGGTTGCTGTTTTaGGGAATGATGGGGCTGCAAGATTTGCAAGGTGAG +
Preference number: 6 (lower is better)
Translates to: VCPQTQELWLLF*GMMGLQDLQGE
Trigger: CTCACCTTGCAAATCTTGCAGCCCCATCATTCCCCAAAACAGCAACCACAACTCCTGGGTTTGTGGACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp ACTACAAGAGTTAATGCCGGCATCTGGCGAGATGACTaGTCACAGGGCATCTCCATTTTCCCAGTTTCCAGC +
Preference number: 6 (lower is better)
Translates to: TTRVNAGIWRDD*SQGISIFPVSS
Trigger: GCTGGAAACTGGGAAAATGGAGATGCCCTGTGACCAGTCATCTCGCCAGATGCCGGCATTAACTCTTGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513350.2
CDS CAA 72 bp AGCGAAGCTTTTCCCTCATTTCTGCATAATTTCTACTaGTTGGTGCAGCTGGAGGCCCGCCGTGCCCAAAGA +
Preference number: 6 (lower is better)
Translates to: SEAFPSFLHNFY*LVQLEARRAQR
Trigger: TCTTTGGGCACGGCGGGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAGAAATGAGGGAAAAGCTTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000513350.2
ENST00000545951.5
ENST00000637812.2
CDS TCA 72 bp AGCCTGATCTGTGACACCAGTGCGGGCAAGTTGCTCTaGAGAAGTGGCTCCGAAAAGACCAGATTTTCAAAC +
Preference number: 6 (lower is better)
Translates to: SLICDTSAGKLL*RSGSEKTRFSN
Trigger: GTTTGAAAATCTGGTCTTTTCGGAGCCACTTCTTCAGAGCAACTTGCCCGCACTGGTGTCACAGATCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp AAGCTTTTCCCTCATTTCTGCATAATTTCTACTTGTTaGTGCAGCTGGAGGCTCATGCACTCACCCCGCCGT +
Preference number: 6 (lower is better)
Translates to: KLFPHFCIISTC*CSWRLMHSPRR
Trigger: ACGGCGGGGTGAGTGCATGAGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAGAAATGAGGGAAAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS CAA 72 bp AGCGAAGCTTTTCCCTCATTTCTGCATAATTTCTACTaGTTGGTGCAGCTGGAGGCTCATGCACTCACCCCG +
Preference number: 6 (lower is better)
Translates to: SEAFPSFLHNFY*LVQLEAHALTP
Trigger: CGGGGTGAGTGCATGAGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAGAAATGAGGGAAAAGCTTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513898.5
CDS GCA 72 bp GTAGTTCTGCAGCTGCTGAGGTTCCCGGTCCGCCTCTaGCGAAATTTCTTCATATGGTTCTTTCTCTCAATA +
Preference number: 6 (lower is better)
Translates to: VVLQLLRFPVRL*RNFFIWFFLSI
Trigger: TATTGAGAGAAAGAACCATATGAAGAAATTTCGGCAGAGGCGGACCGGGAACCTCAGCAGCTGCAGAACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
CDS CCA 72 bp AAGCTTTTCCCTCATTTCTGCATAATTTCTACTTGTTaGTGCAGCTGGAGGCCCGCCGTGCCCAAAGAATTC +
Preference number: 6 (lower is better)
Translates to: KLFPHFCIISTC*CSWRPAVPKEF
Trigger: GAATTCTTTGGGCACGGCGGGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAGAAATGAGGGAAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000513350.2
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp GTTTTCATTGTCATAGCAGCCCCTCGAAGCCAGGACTaGACAAGGGTGCCAGTATCAATGCTCTTATTCACA +
Preference number: 6 (lower is better)
Translates to: VFIVIAAPRSQD*TRVPVSMLLFT
Trigger: TGTGAATAAGAGCATTGATACTGGCACCCTTGTCCAGTCCTGGCTTCGAGGGGCTGCTATGACAATGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502458.5
ENST00000513350.2
CDS CCA 72 bp AAGCTTTTCCCTCATTTCTGCATAATTTCTACTTGTTaGTGCAGCTGGAGGCCTCCTTCTGGTTGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: KLFPHFCIISTC*CSWRPPSGWWR
Trigger: CCTCCACCAACCAGAAGGAGGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAGAAATGAGGGAAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS CAA 72 bp AGCGAAGCTTTTCCCTCATTTCTGCATAATTTCTACTaGTTGGTGCAGCTGGAGGCCTCCTTCTGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: SEAFPSFLHNFY*LVQLEASFWLV
Trigger: CACCAACCAGAAGGAGGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAGAAATGAGGGAAAAGCTTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512465.5
CDS TCA 72 bp GATGGTGTCAGTCCAGAAGCTTCCTGCTTACAAACATaGCATTCACAAGTGTTTGGAGCTTGTTCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: DGVSPEASCLQT*HSQVFGACSAC
Trigger: GCAGGCTGAACAAGCTCCAAACACTTGTGAATGTCATGTTTGTAAGCAGGAAGCTTCTGGACTGACACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp CTCAACTCAAAAACTACAAGAGTTAATGCCGGCATCTaGCGAGATGACTGGTCACAGGGCATCTCCATTTTC +
Preference number: 6 (lower is better)
Translates to: LNSKTTRVNAGI*RDDWSQGISIF
Trigger: GAAAATGGAGATGCCCTGTGACCAGTCATCTCGCCAGATGCCGGCATTAACTCTTGTAGTTTTTGAGTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513350.2
CDS CAA 72 bp GAGGTGGAAGGGCTTCCGGTCTTGTTTCTGAGAGTGTaGGCCCTAATATTTCACTCCCAGAAATTGTATCTG +
Preference number: 6 (lower is better)
Translates to: EVEGLPVLFLRV*ALIFHSQKLYL
Trigger: CAGATACAATTTCTGGGAGTGAAATATTAGGGCCAACACTCTCAGAAACAAGACCGGAAGCCCTTCCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 90 bp ATGCTCAGCCGGGACGATAACATGTGCCTCATGGTGTCTGTGAAGTaGTTCTCGCCAGTAACTGCTTTCTTATTGGTTAACTGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: MLSRDDNMCLMVSVK*FSPVTAFLLVNCSS
Trigger: TGAAGAACAGTTAACCAATAAGAAAGCAGTTACTGGCGAGAACAACTTCACAGACACCATGAGGCACATGTTATCGTCCCGGCTGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 72 bp GTTCTTTCTCTCAATAGCGAAGCAACTGCCTTACTCTaGTTGCTGTCTGTCACATTAGCCCAGTTTCTCCGT +
Preference number: 6 (lower is better)
Translates to: VLSLNSEATALL*LLSVTLAQFLR
Trigger: ACGGAGAAACTGGGCTAATGTGACAGACAGCAACAAGAGTAAGGCAGTTGCTTCGCTATTGAGAGAAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513898.5
ENST00000545951.5
CDS GCA 72 bp TTTTGCAGCATTCTTTTTCTCTTTACTATCCGAGACTaGAGGTGTTTCATTGCTAGATGGAGGTGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: FCSILFLFTIRD*RCFIARWRWKG
Trigger: GCCCTTCCACCTCCATCTAGCAATGAAACACCTGCAGTCTCGGATAGTAAAGAGAAAAAGAATGCTGCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CCA 72 bp GATGCCGGTCATAGCAGCCCCTCAAACTACAGACTATaGAGGCACAAAATGGGTCAAGATTTACAAACTATA +
Preference number: 6 (lower is better)
Translates to: DAGHSSPSNYRL*RHKMGQDLQTI
Trigger: TATAGTTTGTAAATCTTGACCCATTTTGTGCCTCCATAGTCTGTAGTTTGAGGGGCTGCTATGACCGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513350.2
CDS CAA 90 bp GCCGTAAGCGAAGCTTTTCCCTCATTTCTGCATAATTTCTACTTGTaGGTGCAGCTGGAGGCTGAGAAAAACAACAAAGTTATGCTTAAG +
Preference number: 6 (lower is better)
Translates to: AVSEAFPSFLHNFYL*VQLEAEKNNKVMLK
Trigger: CTTAAGCATAACTTTGTTGTTTTTCTCAGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAGAAATGAGGGAAAAGCTTCGCTTACGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506120.1
CDS CAA 90 bp TCAGCCGTAAGCGAAGCTTTTCCCTCATTTCTGCATAATTTCTACTaGTTGGTGCAGCTGGAGGCTGAGAAAAACAACAAAGTTATGCTT +
Preference number: 6 (lower is better)
Translates to: SAVSEAFPSFLHNFY*LVQLEAEKNNKVML
Trigger: AAGCATAACTTTGTTGTTTTTCTCAGCCTCCAGCTGCACCAACAAGTAGAAATTATGCAGAAATGAGGGAAAAGCTTCGCTTACGGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506120.1
CDS CAA 90 bp ATTCCACTCTGGAGTATTCCCAAAACAGCTCGGATAAATATGGTCTaGAAGAGATGCATTGAATACCTGATGCTTATTTGTGTGATTCTG +
Preference number: 6 (lower is better)
Translates to: IPLWSIPKTARINMV*KRCIEYLMLICVIL
Trigger: CAGAATCACACAAATAAGCATCAGGTATTCAATGCATCTCTTCAAGACCATATTTATCCGAGCTGTTTTGGGAATACTCCAGAGTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp CCCAAAACAGCTCGGATAAATATGGTCTTGAAGAGATaGATTGAATACCTGATGCTTATTTGTGTGATTCTG +
Preference number: 6 (lower is better)
Translates to: PKTARINMVLKR*IEYLMLICVIL
Trigger: CAGAATCACACAAATAAGCATCAGGTATTCAATGCATCTCTTCAAGACCATATTTATCCGAGCTGTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS GCA 72 bp ATATTTCACTCCCAGAAATTGTATCTGGCAAGAAAGTaGCAGGATTCCAGTTCTTATCATTCATCACTTCTG +
Preference number: 6 (lower is better)
Translates to: IFHSQKLYLARK*QDSSSYHSSLL
Trigger: CAGAAGTGATGAATGATAAGAACTGGAATCCTGGCACTTTCTTGCCAGATACAATTTCTGGGAGTGAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 72 bp TGGAGTATTCCCAAAACAGCTCGGATAAATATGGTCTaGAAGAGATGCATTGAATACCTGATGCTTATTTGT +
Preference number: 6 (lower is better)
Translates to: WSIPKTARINMV*KRCIEYLMLIC
Trigger: ACAAATAAGCATCAGGTATTCAATGCATCTCTTCAAGACCATATTTATCCGAGCTGTTTTGGGAATACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324666.9
ENST00000382839.7
ENST00000502458.5
ENST00000505311.5
ENST00000512465.5
ENST00000513350.2
ENST00000513898.5
ENST00000545951.5
ENST00000637812.2
CDS CAA 72 bp TTAAAATGTCAGACCATCATTTTATGTCATTTATTGTaGCTACGAAGAAGCCATGTCCATACCTCATCCTTC +
Preference number: 6 (lower is better)
Translates to: LKCQTIILCHLL*LRRSHVHTSSF
Trigger: GAAGGATGAGGTATGGACATGGCTTCTTCGTAGCAACAATAAATGACATAAAATGATGGTCTGACATTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506904.1