RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM189A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104059, ENSG00000273564

Ensembl transcript IDs: ENST00000261275.4, ENST00000261275.5, ENST00000560021.1, ENST00000560050.1, ENST00000560082.1, ENST00000622117.2, ENST00000631577.1, ENST00000631618.1, ENST00000632505.1

Found 386 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGAAGGCACCCCACGGAGGGAGGCCGAGCTCAAGGCCCAGGAGATaGTGGGTTCCTCCAACCCCCGCAACACCGGCCTGTTCCCTGGGG +
Preference number: 1 (lower is better)
Translates to: GKAPHGGRPSSRPRR*WVPPTPATPACSLG
Trigger: CCCCAGGGAACAGGCCGGTGTTGCGGGGGTTGGAGGAACCCACCATCTCCTGGGCCTTGAGCTCGGCCTCCCTCCGTGGGGTGCCTTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR TCA 90 bp ACGCATAGGGAGGGGAAGCAGCCAGCTTTCTCCTGGGCTGTGAGCTaGCGTGCAGCCCGGGGCCTGGGCTCTTGCTGCTGGTACCCGGAT +
Preference number: 1 (lower is better)
Translates to: THREGKQPAFSWAVS*RAARGLGSCCWYPD
Trigger: ATCCGGGTACCAGCAGCAAGAGCCCAGGCCCCGGGCTGCACGTCAGCTCACAGCCCAGGAGAAAGCTGGCTGCTTCCCCTCCCTATGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR TCA 90 bp GAAAGACGCATAGGGAGGGGAAGCAGCCAGCTTTCTCCTGGGCTGTaGGCTGACGTGCAGCCCGGGGCCTGGGCTCTTGCTGCTGGTACC +
Preference number: 1 (lower is better)
Translates to: ERRIGRGSSQLSPGL*ADVQPGAWALAAGT
Trigger: GGTACCAGCAGCAAGAGCCCAGGCCCCGGGCTGCACGTCAGCTCACAGCCCAGGAGAAAGCTGGCTGCTTCCCCTCCCTATGCGTCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 90 bp CCCCGGCTGCATGAGGAGAACACCCCAGAGACCGAGTCCACTGGGTaGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGG +
Preference number: 1 (lower is better)
Translates to: PRLHEENTPETESTG*LVVLASLELQPCLR
Trigger: CCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCACCCAGTGGACTCGGTCTCTGGGGTGTTCTCCTCATGCAGCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 90 bp GCCCCCAGGGCAGGGATAAAGGACTGGAGGAAGGCTCTGGGCACCTaGATTGGAACCTCACCCCCTTCCCAGCTTCCAGCCACACAGAAG +
Preference number: 1 (lower is better)
Translates to: APRAGIKDWRKALGT*IGTSPPSQLPATQK
Trigger: CTTCTGTGTGGCTGGAAGCTGGGAAGGGGGTGAGGTTCCAATCCAGGTGCCCAGAGCCTTCCTCCAGTCCTTTATCCCTGCCCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 90 bp GCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTaGAGCTCTAGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGT +
Preference number: 1 (lower is better)
Translates to: AGGLGLAGIAAMSED*SSSPPKGSAQGQCC
Trigger: ACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCTAGAGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 90 bp CGCACCTCAGAGACAGTGGAGATTCAGAGGCCAGGGCGTCAGGCGTaGCTGAAGCTCGGCTCCAGGGCGGCCATTCTGAAAATCCACCAA +
Preference number: 1 (lower is better)
Translates to: RTSETVEIQRPGRQA*LKLGSRAAILKIHQ
Trigger: TTGGTGGATTTTCAGAATGGCCGCCCTGGAGCCGAGCTTCAGCCACGCCTGACGCCCTGGCCTCTGAATCTCCACTGTCTCTGAGGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 90 bp CGCCAAGCTGGGCCTGAAGGCCTCTTTGTCAGGCATGATGGCTTCTaGCAAGAACATCTGTGGCGCCAGGCGTTGGTGTCCACGGTCAGA +
Preference number: 1 (lower is better)
Translates to: RQAGPEGLFVRHDGF*QEHLWRQALVSTVR
Trigger: TCTGACCGTGGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCTGACAAAGAGGCCTTCAGGCCCAGCTTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 90 bp GCTGCCGCATGCCCGGGGAAAGGTCAGCTCTGGGTCAAAGGGACCTaGTTTATCAGGAGGGGCTACTTCTCAGAGAAACCGGCCTCTCTC +
Preference number: 1 (lower is better)
Translates to: AAACPGKGQLWVKGT*FIRRGYFSEKPASL
Trigger: GAGAGAGGCCGGTTTCTCTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTTTGACCCAGAGCTGACCTTTCCCCGGGCATGCGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 90 bp TGCGCAGGTGTGTCTGCTGCCGCATGCCCGGGGAAAGGTCAGCTCTaGGTCAAAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGAG +
Preference number: 1 (lower is better)
Translates to: CAGVSAAACPGKGQL*VKGTCFIRRGYFSE
Trigger: CTCTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTTTGACCCAGAGCTGACCTTTCCCCGGGCATGCGGCAGCAGACACACCTGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 90 bp CTGTTTTGTTCACCGCAGGGCCCACCCAACGCAGCTCAGGGGCTGTaGCTGCTAGTGGCCCTGAACAGGCATTTCCATCACTGCACAAAG +
Preference number: 1 (lower is better)
Translates to: LFCSPQGPPNAAQGL*LLVALNRHFHHCTK
Trigger: CTTTGTGCAGTGATGGAAATGCCTGTTCAGGGCCACTAGCAGCCACAGCCCCTGAGCTGCGTTGGGTGGGCCCTGCGGTGAACAAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 90 bp TGGGTTTGTAAGTGGTTTATGATCCTCCTGCGCAGGTGTGTCTGCTaGCGCATGCCCGGGGAAAGGTCAGCTCTGGGTCAAAGGGACCTG +
Preference number: 1 (lower is better)
Translates to: WVCKWFMILLRRCVC*RMPGERSALGQRDL
Trigger: CAGGTCCCTTTGACCCAGAGCTGACCTTTCCCCGGGCATGCGGCAGCAGACACACCTGCGCAGGAGGATCATAAACCACTTACAAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 90 bp CAGGGGCTGTGGCTGCTAGTGGCCCTGAACAGGCATTTCCATCACTaGACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGG +
Preference number: 1 (lower is better)
Translates to: QGLWLLVALNRHFHH*TKFSWMALFHGHCW
Trigger: CCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAATGCCTGTTCAGGGCCACTAGCAGCCACAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 90 bp CACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTaGGAGCAGCTGCCACTGATGCCACCAGAAAACAAGGGGATGGGG +
Preference number: 1 (lower is better)
Translates to: HCTKFSWMALFHGHC*EQLPLMPPENKGMG
Trigger: CCCCATCCCCTTGTTTTCTGGTGGCATCAGTGGCAGCTGCTCCCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 90 bp ACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTaGTCCAGGGACAGGATGGGAGCCTGGAGAAAGGGGGCCCAAGAG +
Preference number: 1 (lower is better)
Translates to: TKELGIGTCCYGSHN*SRDRMGAWRKGAQE
Trigger: CTCTTGGGCCCCCTTTCTCCAGGCTCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 90 bp CTAGTGGCCCTGAACAGGCATTTCCATCACTGCACAAAGTTCTCGTaGATGGCGCTGTTCCACGGCCATTGTTGGGAGCAGCTGCCACTG +
Preference number: 1 (lower is better)
Translates to: LVALNRHFHHCTKFS*MALFHGHCWEQLPL
Trigger: CAGTGGCAGCTGCTCCCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAATGCCTGTTCAGGGCCACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR TCA 90 bp CCGGCCTCTCTCCTGCAGAACTGTGACCCGCTGAGCTCAATCAAGTaGGCTCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACG +
Preference number: 1 (lower is better)
Translates to: PASLLQNCDPLSSIK*AQTQRSWESALVVT
Trigger: CGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGAGCTCACTTGATTGAGCTCAGCGGGTCACAGTTCTGCAGGAGAGAGGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR TCA 90 bp GAGGGGCTACTTCTCAGAGAAACCGGCCTCTCTCCTGCAGAACTGTaGCCCGCTGAGCTCAATCAAGTGAGCTCAGACACAAAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: EGLLLRETGLSPAEL*PAELNQVSSDTKEL
Trigger: CAGCTCCTTTGTGTCTGAGCTCACTTGATTGAGCTCAGCGGGTCACAGTTCTGCAGGAGAGAGGCCGGTTTCTCTGAGAAGTAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 90 bp CCTCATTTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTaGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCACCAGCGCA +
Preference number: 1 (lower is better)
Translates to: PHFEGAEGSSPAASS*VQFPYPQNRAATSA
Trigger: TGCGCTGGTGGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAAATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR TCA 90 bp ACTTCTCAGAGAAACCGGCCTCTCTCCTGCAGAACTGTGACCCGCTaGGCTCAATCAAGTGAGCTCAGACACAAAGGAGCTGGGAATCGG +
Preference number: 1 (lower is better)
Translates to: TSQRNRPLSCRTVTR*AQSSELRHKGAGNR
Trigger: CCGATTCCCAGCTCCTTTGTGTCTGAGCTCACTTGATTGAGCTCAGCGGGTCACAGTTCTGCAGGAGAGAGGCCGGTTTCTCTGAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 90 bp TATGGCAGAGGCCCGCACTGCACATTTGTTTGCACAATAGCCCTGTaGACAGAAAGTTGGGCCCAGGCTGCCATCTGTGCTAACACTACC +
Preference number: 1 (lower is better)
Translates to: YGRGPHCTFVCTIAL*TESWAQAAICANTT
Trigger: GGTAGTGTTAGCACAGATGGCAGCCTGGGCCCAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTGCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 90 bp ACCAGAGAGTTCACTGTGGACGTGAAAGTCATCTTTCCGAATTACTaGGCTAGGCAGGAAATGCAATCCCCAAAGAGACACTGCTCGGCT +
Preference number: 1 (lower is better)
Translates to: TREFTVDVKVIFPNY*ARQEMQSPKRHCSA
Trigger: AGCCGAGCAGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGACTTTCACGTCCACAGTGAACTCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 90 bp CCGCACTGCACATTTGTTTGCACAATAGCCCTGTGGACAGAAAGTTaGGCCCAGGCTGCCATCTGTGCTAACACTACCTATTTCCTTTCA +
Preference number: 1 (lower is better)
Translates to: PHCTFVCTIALWTES*AQAAICANTTYFLS
Trigger: TGAAAGGAAATAGGTAGTGTTAGCACAGATGGCAGCCTGGGCCCAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR TCA 90 bp CAAGGTGCTGCACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTaGAAGTCATCTTTCCGAATTACTGGGCTAGGCAGGAAATGCAAT +
Preference number: 1 (lower is better)
Translates to: QGAARQIKPESSLWT*KSSFRITGLGRKCN
Trigger: ATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGACTTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGCAGCACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 90 bp GCCTGTTGCTGTATTCACATTTGTGCAACACTGCTCAGTTCAAGGTaGTGCACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTGAAA +
Preference number: 1 (lower is better)
Translates to: ACCCIHICATLLSSR*CTPDKTREFTVDVK
Trigger: TTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGCAGCACCTTGAACTGAGCAGTGTTGCACAAATGTGAATACAGCAACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 90 bp TGTTGCTGTATTCACATTTGTGCAACACTGCTCAGTTCAAGGTGCTaGACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTGAAAGTC +
Preference number: 1 (lower is better)
Translates to: CCCIHICATLLSSRC*TPDKTREFTVDVKV
Trigger: GACTTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGCAGCACCTTGAACTGAGCAGTGTTGCACAAATGTGAATACAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 90 bp TTTTGGAGATACTTTGAGTCTTTAGGTGACGTAAGTGTCGCCTGTTaGTGTATTCACATTTGTGCAACACTGCTCAGTTCAAGGTGCTGC +
Preference number: 1 (lower is better)
Translates to: FWRYFESLGDVSVAC*CIHICATLLSSRCC
Trigger: GCAGCACCTTGAACTGAGCAGTGTTGCACAAATGTGAATACAGCAACAGGCGACACTTACGTCACCTAAAGACTCAAAGTATCTCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp CAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGATAAAGGACTGGAGGCCTGGCACCCAGGAGTaGAAGACACCCTCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: QLKESHTAAPRAGIKDWRPGTQE*KTPSGP
Trigger: GGGACCAGAGGGTGTCTTCCACTCCTGGGTGCCAGG...CCTCCAGTCCTTTATCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTACCGCCAAGCTGGGCCTaGAGGCCTCTTTGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALPPSWA*RPLCQA
Trigger: TGCCTGACAAAGAGGCCTTCAGGCCCAGCTTGGCGG...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTAGTGTCTGCTGCCGCATaGCCGGGGAAAGGTCAGCTC +
Preference number: 2 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALVSAAA*PGKGQL
Trigger: GAGCTGACCTTTCCCCGGGCATGCGGCAGCAGACAC...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGTGTGGCGCCAGGCGTTaGTGTCCACGGTCAGAAATG +
Preference number: 2 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGCGARR*CPRSEM
Trigger: CATTTCTGACCGTGGACACCAACGCCTGGCGCCACA...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGTGCCAAGAACATCTGTaGCGCCAGGCGTTGGTGTCC +
Preference number: 2 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGCQEHL*RQALVS
Trigger: GGACACCAACGCCTGGCGCCACAGATGTTCTTGGCA...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGTCTGGGCACCTGGATTaGAACCTCACCCCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGSGHLD*NLTPFP
Trigger: TGGGAAGGGGGTGAGGTTCCAATCCAGGTGCCCAGA...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CAA 90 bp GAGACCGAGTCCACTGGGTGGCTGGTGGTCTTGGCCTCGCTGGAATaGCAGCCATGTCTGAGGACTGCAGCTCTAGCCCACCCAAGGGCT +
Preference number: 2 (lower is better)
Translates to: ETESTGWLVVLASLE*QPCLRTAALAHPRA
Trigger: AGCCCTTGGGTGGGCTAGAGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCACCCAGTGGACTCGGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp CAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGATAAAGGACTGGAGGTCTGGGCACCTGGATTaGAACCTCACCCCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: QLKESHTAAPRAGIKDWRSGHLD*NLTPFP
Trigger: TGGGAAGGGGGTGAGGTTCCAATCCAGGTGCCCAGA...CCTCCAGTCCTTTATCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGCCAGGGCGTCAGGCGTaGCTGAAGCTCGGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPPGRQA*LKLGSR
Trigger: CCTGGAGCCGAGCTTCAGCCACGCCTGACGCCCTGG...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp GTCCTTGCGGATGATGCTCCCCCTTCTGCGATCTTGCTTGCCATAGAGTTGGGGGGGCAGCAGCCCCATTaGCCATTGGGACCGGGCCCT +
Preference number: 2 (lower is better)
Translates to: VLADDAPPSAILLAIELGGQQPH*PLGPGP
Trigger: AGGGCCCGGTCCCAATGGCCAATGGGGCTGCTGCCC...CCCCAACTCTATGGCAAGCAAGATCGCAGAAGGGGGAGCATCATCCGCAAGGAC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTCCGCCAAGCTGGGCCTaGAGGCCTCTTTGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: WLVVLASLELQPCLRTAAPPSWA*RPLCQA
Trigger: TGCCTGACAAAGAGGCCTTCAGGCCCAGCTTGGCGG...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGTCTCCTGCAGAACTGTaGCCCGCTGAGCTCAATCAA +
Preference number: 2 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGSPAEL*PAELNQ
Trigger: TTGATTGAGCTCAGCGGGTCACAGTTCTGCAGGAGA...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTTCAGCCGACCACAGCTaGAGGAGTCCCACACCGCAG +
Preference number: 2 (lower is better)
Translates to: WLVVLASLELQPCLRTAASADHS*RSPTPQ
Trigger: CTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGA...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTAGGCCCAGGAGATGGTaGGTTCCTCCAACCCCCGCA +
Preference number: 2 (lower is better)
Translates to: WLVVLASLELQPCLRTAARPRRW*VPPTPA
Trigger: TGCGGGGGTTGGAGGAACCCACCATCTCCTGGGCCT...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CAA 90 bp GAGGAGAACACCCCAGAGACCGAGTCCACTGGGTGGCTGGTGGTCTaGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTCTA +
Preference number: 2 (lower is better)
Translates to: EENTPETESTGWLVV*ASLELQPCLRTAAL
Trigger: TAGAGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCACCCAGTGGACTCGGTCTCTGGGGTGTTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp CAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGATAAAGGACTGGAGGAGAACTGTGACCCGCTaGGCTCAATCAAGTGAGCTC +
Preference number: 2 (lower is better)
Translates to: QLKESHTAAPRAGIKDWRRTVTR*AQSSEL
Trigger: GAGCTCACTTGATTGAGCTCAGCGGGTCACAGTTCT...CCTCCAGTCCTTTATCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTCTGCCCCGGCTGCATaGGGAGAACACCCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPSAPAA*GEHPRD
Trigger: GTCTCTGGGGTGTTCTCCTCATGCAGCCGGGGCAGA...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp CAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGATAAAGGACTGGAGGTGGGTCAAAGGGACCTaGTTTATCAGGAGGGGCTAC +
Preference number: 2 (lower is better)
Translates to: QLKESHTAAPRAGIKDWRWVKGT*FIRRGY
Trigger: GTAGCCCCTCCTGATAAAGCAGGTCCCTTTGACCCA...CCTCCAGTCCTTTATCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGGGGACCGGGCCCTGCTaGAGAGAAGGGAAGGATGCT +
Preference number: 2 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPGTGPC*REGKDA
Trigger: AGCATCCTTCCCTTCTCTGCAGCAGGGCCCGGTCCC...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp AGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCCCAGGGCGTCAGGCGTaGCTGAAGCTCGGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: SPAASSWVQFPYPQNRAAPGRQA*LKLGSR
Trigger: CCTGGAGCCGAGCTTCAGCCACGCCTGACGCCCTGG...GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp AGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCGGGCAGCAGCCCCATTaGCCATTGGGACCGGGCCCT +
Preference number: 2 (lower is better)
Translates to: SPAASSWVQFPYPQNRAAGQQPH*PLGPGP
Trigger: AGGGCCCGGTCCCAATGGCCAATGGGGCTGCTGCCC...GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp GTCCTTGCGGATGATGCTCCCCCTTCTGCGATCTTGCTTGCCATAGAGTTGGGGCACCCCGTCCCTGACTaGCTCATTTCGAAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: VLADDAPPSAILLAIELGHPVPD*LISKGQ
Trigger: CTGCCCCTTCGAAATGAGGCAGTCAGGGACGGGGTG...CCCCAACTCTATGGCAAGCAAGATCGCAGAAGGGGGAGCATCATCCGCAAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGAGGCCCAGGAGATGGTaGGTTCCTCCAACCCCCGCA +
Preference number: 2 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGRPRRW*VPPTPA
Trigger: TGCGGGGGTTGGAGGAACCCACCATCTCCTGGGCCT...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGGCGCAAACCCAGAGCTaGGTGAAGGTGGGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGAQTQS*VKVGCR
Trigger: CCTGCACCCCACCTTCACCCAGCTCTGGGTTTGCGC...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACAGGGAGCAGCTGCCACTaGTGCCACCAGAAAACAAGG +
Preference number: 2 (lower is better)
Translates to: GIRELGELKDKPHKAEGTGSSCH*CHQKTR
Trigger: CCTTGTTTTCTGGTGGCATCAGTGGCAGCTGCTCCC...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGGGGAGCAGCTGCCACTaGTGCCACCAGAAAACAAGG +
Preference number: 2 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPGSSCH*CHQKTR
Trigger: CCTTGTTTTCTGGTGGCATCAGTGGCAGCTGCTCCC...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTCCCCAAAGAGACACTaGTCGGCTCCCCTCGAGAGA +
Preference number: 2 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPSPKRH*SAPLER
Trigger: TCTCTCGAGGGGAGCCGAGCAGTGTCTCTTTGGGGA...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGACATTTGTGCAACACTaGTCAGTTCAAGGTGCTGCA +
Preference number: 2 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGTFVQH*SVQGAA
Trigger: TGCAGCACCTTGAACTGAGCAGTGTTGCACAAATGT...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGAGGCATTTCCATCACTaGACAAAGTTCTCGTGGATG +
Preference number: 2 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGRHFHH*TKFSWM
Trigger: CATCCACGAGAACTTTGTGCAGTGATGGAAATGCCT...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACATGCCAAGAACATCTGTaGCGCCAGGCGTTGGTGTCC +
Preference number: 2 (lower is better)
Translates to: GIRELGELKDKPHKAEGTCQEHL*RQALVS
Trigger: GGACACCAACGCCTGGCGCCACAGATGTTCTTGGCA...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGGACAGGATGGGAGCCTaGAGAAAGGGGGCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGDRMGA*RKGAQE
Trigger: CTCTTGGGCCCCCTTTCTCCAGGCTCCCATCCTGTC...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp GTCCTTGCGGATGATGCTCCCCCTTCTGCGATCTTGCTTGCCATAGAGTTGGGGAGGCTGTCCCCAAGCTaGGCGTGTCTGCTTCTCCAT +
Preference number: 2 (lower is better)
Translates to: VLADDAPPSAILLAIELGRLSPS*ACLLLH
Trigger: ATGGAGAAGCAGACACGCCCAGCTTGGGGACAGCCT...CCCCAACTCTATGGCAAGCAAGATCGCAGAAGGGGGAGCATCATCCGCAAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CAA 90 bp GCCTCATTTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTaGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCACCAGCGC +
Preference number: 2 (lower is better)
Translates to: ASFRRGRRFQPSGIK*GTVSVSTKQSCHQR
Trigger: GCGCTGGTGGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAAATGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp ACAGGAAATAGGCCAGAGCGTGATGAACGCCTAATGATAGAGCCATCGAGCCACGGGGTAACAGTTCCCTaGCCACACCGCCCCCAGATC +
Preference number: 2 (lower is better)
Translates to: TGNRPERDERLMIEPSSHGVTVP*PHRPQI
Trigger: GATCTGGGGGCGGTGTGGGCAGGGAACTGTTACCCC...GTGGCTCGATGGCTCTATCATTAGGCGTTCATCACGCTCTGGCCTATTTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp GTCCTTGCGGATGATGCTCCCCCTTCTGCGATCTTGCTTGCCATAGAGTTGGGGCAAGCTGGGCGTGTCTaGTTCTCCATAAGCAGCACG +
Preference number: 2 (lower is better)
Translates to: VLADDAPPSAILLAIELGQAGRV*FSISST
Trigger: CGTGCTGCTTATGGAGAAGCAGACACGCCCAGCTTG...CCCCAACTCTATGGCAAGCAAGATCGCAGAAGGGGGAGCATCATCCGCAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGTCAGCCCAGGGACAATaGTGTGTGAACCCCCAAGCC +
Preference number: 2 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGSAQGQ*CVNPQA
Trigger: GGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGA...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGGCCATGTCTGAGGACTaGAGCTCTAGCCCACCCAAG +
Preference number: 2 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGAMSED*SSSPPK
Trigger: CTTGGGTGGGCTAGAGCTGCAGTCCTCAGACATGGC...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGATTGGGACCGGGCCCTaGTGCAGAGAAGGGAAGGAT +
Preference number: 2 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGIGTGP*CREGKD
Trigger: ATCCTTCCCTTCTCTGCAGCAGGGCCCGGTCCCAAT...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp TCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGGACAGGATGGGAGCCTTGTGGCGCCAGGCGTTaGTGTCCACGGTCAGAAATG +
Preference number: 2 (lower is better)
Translates to: SALVVTDHTTAPGTGWEPCGARR*CPRSEM
Trigger: CATTTCTGACCGTGGACACCAACGCCTGGCGCCACA...AGGCTCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp AGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCCCACTGGGTGGCTGGTaGTCTTGGCCTCGCTGGAAT +
Preference number: 2 (lower is better)
Translates to: SPAASSWVQFPYPQNRAAPLGGW*SWPRWN
Trigger: ATTCCAGCGAGGCCAAGACCACCAGCCACCCAGTGG...GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CAA 90 bp CCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATaGTTGGGAGCAGCTGCCACTGATGCCACCAGAAAACAAGGGGAT +
Preference number: 2 (lower is better)
Translates to: PSLHKVLVDGAVPRP*LGAAATDATRKQGD
Trigger: ATCCCCTTGTTTTCTGGTGGCATCAGTGGCAGCTGCTCCCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTATGCTTTGGAAGGCCCTaGTTTTGGAGATACTTTGAG +
Preference number: 2 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALCFGRP*FWRYFE
Trigger: CTCAAAGTATCTCCAAAATCAGGGCCTTCCAAAGCA...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGAGAACTGTGACCCGCTaGGCTCAATCAAGTGAGCTC +
Preference number: 2 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPRTVTR*AQSSEL
Trigger: GAGCTCACTTGATTGAGCTCAGCGGGTCACAGTTCT...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGTTCCACGGCCATTGTTaGGAGCAGCTGCCACTGATG +
Preference number: 2 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGFHGHC*EQLPLM
Trigger: CATCAGTGGCAGCTGCTCCCAACAATGGCCGTGGAA...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGGGGCTAGGCAGGAAATaGAATCCCCAAAGAGACACT +
Preference number: 2 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPGLGRK*NPQRDT
Trigger: AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCC...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTCTCAGTTCAAGGTGCTaGACGCCAGATAAAACCAGA +
Preference number: 2 (lower is better)
Translates to: WLVVLASLELQPCLRTAALSSRC*TPDKTR
Trigger: TCTGGTTTTATCTGGCGTGCAGCACCTTGAACTGAG...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp AAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGAGAAACCGGCCTCTCTCCTACGGATCACACAACTaGTCCAGGGACAGGATGGGA +
Preference number: 2 (lower is better)
Translates to: KGPALSGGATSQRNRPLSYGSHN*SRDRMG
Trigger: TCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTA...GGAGAGAGGCCGGTTTCTCTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp AAGGTCAGCTCTGGGTCAAAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGCTGTGGACAGAAAGTTaGGCCCAGGCTGCCATCTGT +
Preference number: 2 (lower is better)
Translates to: KVSSGSKGPALSGGATSQLWTES*AQAAIC
Trigger: ACAGATGGCAGCCTGGGCCCAACTTTCTGTCCACAG...CTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTTTGACCCAGAGCTGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGTGCACAATAGCCCTGTaGACAGAAAGTTGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGCTIAL*TESWAQ
Trigger: CTGGGCCCAACTTTCTGTCCACAGGGCTATTGTGCA...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp AAGCAATCGAAGCCTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCTCTCTGGGGAGACCTTaGCCTCTAGGCTGTTTTGTT +
Preference number: 2 (lower is better)
Translates to: KQSKPFQPTTAEGVPHRSSLGRP*PLGCFV
Trigger: AACAAAACAGCCTAGAGGCCAAGGTCTCCCCAGAGA...GCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAGGCTTCGATTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CAA 90 bp CAATCAAGTGAGCTCAGACACAAAGGAGCTGGGAATCGGCACTTGTaGTTACGGATCACACAACTGCTCCAGGGACAGGATGGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: QSSELRHKGAGNRHL*LRITQLLQGQDGSL
Trigger: CAGGCTCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGAGCTCACTTGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CAA 90 bp GCTCAATCAAGTGAGCTCAGACACAAAGGAGCTGGGAATCGGCACTaGTTGTTACGGATCACACAACTGCTCCAGGGACAGGATGGGAGC +
Preference number: 2 (lower is better)
Translates to: AQSSELRHKGAGNRH*LLRITQLLQGQDGS
Trigger: GCTCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGAGCTCACTTGATTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp AAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGAGAAACCGGCCTCTCTCCGGCAGAGGCCCGCACTaGACATTTGTTTGCACAATA +
Preference number: 2 (lower is better)
Translates to: KGPALSGGATSQRNRPLSGRGPH*TFVCTI
Trigger: TATTGTGCAAACAAATGTGCAGTGCGGGCCTCTGCC...GGAGAGAGGCCGGTTTCTCTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp AAGGTCAGCTCTGGGTCAAAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGCTGCTCAGTTCAAGGTaGTGCACGCCAGATAAAACC +
Preference number: 2 (lower is better)
Translates to: KVSSGSKGPALSGGATSQLLSSR*CTPDKT
Trigger: GGTTTTATCTGGCGTGCAGCACCTTGAACTGAGCAG...CTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTTTGACCCAGAGCTGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp TTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGTTTGTAAGTGGTTTATaGTCCTCCTGCGCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: FHHCTKFSWMALFHGHCWFVSGL*SSCAGV
Trigger: CACACCTGCGCAGGAGGATCATAAACCACTTACAAA...CCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCAGGCATGATGGCTTCTaGCAAGAACATCTGTGGCGC +
Preference number: 2 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCRHDGF*QEHLWR
Trigger: GCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCT...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp CAGAGGCCCGCACTGCACATTTGTTTGCACAATAGCCCTGTGGACAGAAAGTTGGGGCTAGGCAGGAAATaGAATCCCCAAAGAGACACT +
Preference number: 2 (lower is better)
Translates to: QRPALHICLHNSPVDRKLGLGRK*NPQRDT
Trigger: AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCC...CAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp TTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGCTCAGTTCAAGGTGCTaGACGCCAGATAAAACCAGA +
Preference number: 2 (lower is better)
Translates to: FHHCTKFSWMALFHGHCWLSSRC*TPDKTR
Trigger: TCTGGTTTTATCTGGCGTGCAGCACCTTGAACTGAG...CCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp TTTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGCTGCTCAGTTCAAGGTaGTGCACGCCAGATAAAACC +
Preference number: 2 (lower is better)
Translates to: FPSLHKVLVDGAVPRPLLLLSSR*CTPDKT
Trigger: GGTTTTATCTGGCGTGCAGCACCTTGAACTGAGCAG...CAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp TTTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGGCAGAGGCCCGCACTaGACATTTGTTTGCACAATA +
Preference number: 2 (lower is better)
Translates to: FPSLHKVLVDGAVPRPLLGRGPH*TFVCTI
Trigger: TATTGTGCAAACAAATGTGCAGTGCGGGCCTCTGCC...CAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp TTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGCAGACACAAAGGAGCTaGGAATCGGCACTTGTTGTT +
Preference number: 2 (lower is better)
Translates to: FHHCTKFSWMALFHGHCWQTQRS*ESALVV
Trigger: AACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTG...CCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTGTCATCAAAAGGCCTaGCTTATGTGTTTTCAGCTC +
Preference number: 2 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPCHQKA*LMCFQL
Trigger: GAGCTGAAAACACATAAGCCAGGCCTTTTGATGACA...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCCCTCTTTGTCAGGCATaGTGGCTTCTGCCAAGAACA +
Preference number: 2 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCPLCQA*WLLPRT
Trigger: TGTTCTTGGCAGAAGCCATCATGCCTGACAAAGAGG...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp TCAAGGTGCTGCACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTGAAAGTCCCTCTTTGTCAGGCATaGTGGCTTCTGCCAAGAACA +
Preference number: 2 (lower is better)
Translates to: SRCCTPDKTREFTVDVKVPLCQA*WLLPRT
Trigger: TGTTCTTGGCAGAAGCCATCATGCCTGACAAAGAGG...GACTTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGCAGCACCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp AGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCCTAGTACGTCTCTCCTaGAAAAGTGCAGGTTGTCAT +
Preference number: 2 (lower is better)
Translates to: SPAASSWVQFPYPQNRAALVRLS*KSAGCH
Trigger: ATGACAACCTGCACTTTTGCAGGAGAGACGTACTAG...GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp ACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGTGCTTTGGAAGGCCCTaGTTTTGGAGATACTTTGAG +
Preference number: 2 (lower is better)
Translates to: TKELGIGTCCYGSHNCSRCFGRP*FWRYFE
Trigger: CTCAAAGTATCTCCAAAATCAGGGCCTTCCAAAGCA...CCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR TCA 90 bp CAGAGGCCCGCACTGCACATTTGTTTGCACAATAGCCCTGTGGACAGAAAGTTGAGTTCACTGTGGACGTaGAAGTCATCTTTCCGAATT +
Preference number: 2 (lower is better)
Translates to: QRPALHICLHNSPVDRKLSSLWT*KSSFRI
Trigger: AATTCGGAAAGATGACTTTCACGTCCACAGTGAACT...CAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR GCA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCACATTTGTGCAACACTaGTCAGTTCAAGGTGCTGCA +
Preference number: 2 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCTFVQH*SVQGAA
Trigger: TGCAGCACCTTGAACTGAGCAGTGTTGCACAAATGT...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp ACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGATCTTTCCGAATTACTaGGCTAGGCAGGAAATGCAA +
Preference number: 2 (lower is better)
Translates to: TKELGIGTCCYGSHNCSRIFPNY*ARQEMQ
Trigger: TTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGAT...CCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CCA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCAAGTTAAATGGGGGATaGGAGACTCCTGCTTTGGAA +
Preference number: 2 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCKLNGG*ETPALE
Trigger: TTCCAAAGCAGGAGTCTCCCATCCCCCATTTAACTT...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 72 bp GAAGCAGCCAGCTTTCTCCTGGGCTGTGAGCTGACGTaGAGCCCGGGGCCTGGGCTCTTGCTGCTGGTACCC +
Preference number: 3 (lower is better)
Translates to: EAASFLLGCELT*SPGPGLLLLVP
Trigger: GGGTACCAGCAGCAAGAGCCCAGGCCCCGGGCTGCACGTCAGCTCACAGCCCAGGAGAAAGCTGGCTGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 72 bp AGCTCTAGCCCACCCAAGGGCTCAGCCCAGGGACAATaGTGTGTGAACCCCCAAGCCCTAGTGTGGACCCCC +
Preference number: 3 (lower is better)
Translates to: SSSPPKGSAQGQ*CVNPQALVWTP
Trigger: GGGGGTCCACACTAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCTAGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp TCACCGCAGGGCCCACCCAACGCAGCTCAGGGGCTGTaGCTGCTAGTGGCCCTGAACAGGCATTTCCATCAC +
Preference number: 3 (lower is better)
Translates to: SPQGPPNAAQGL*LLVALNRHFHH
Trigger: GTGATGGAAATGCCTGTTCAGGGCCACTAGCAGCCACAGCCCCTGAGCTGCGTTGGGTGGGCCCTGCGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp TGTTCTCCCCACTCAGCAACCTTGTGGCCCCCAGGCTaGGGTCAACGGTGGTGTCACAGCAGGTGCCAACCC +
Preference number: 3 (lower is better)
Translates to: CSPHSATLWPPG*GQRWCHSRCQP
Trigger: GGGTTGGCACCTGCTGTGACACCACCGTTGACCCCAGCCTGGGGGCCACAAGGTTGCTGAGTGGGGAGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGGGGGCAGCAGCCCCATaGGCCATTGGGACCGGGCCC +
Preference number: 3 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGGAAAP*AIGTGP
Trigger: GGGCCCGGTCCCAATGGCCAATGGGGCTGCTGCCCC...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
63% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp CAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGATAAAGGACTGGAGGGTTCCACGGCCATTGTaGGGAGCAGCTGCCACTGAT +
Preference number: 3 (lower is better)
Translates to: QLKESHTAAPRAGIKDWRVPRPL*GAAATD
Trigger: ATCAGTGGCAGCTGCTCCCAACAATGGCCGTGGAAC...CCTCCAGTCCTTTATCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGCAGCCCCATTGGCCATaGGGACCGGGCCCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPQPHWP*GPGPAA
Trigger: TGCAGCAGGGCCCGGTCCCAATGGCCAATGGGGCTG...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 72 bp CTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTaGAGCTCTAGCCCACCCAAGGGCTCAGCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: LGLAGIAAMSED*SSSPPKGSAQG
Trigger: TCCCTGGGCTGAGCCCTTGGGTGGGCTAGAGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp GAGACAGTGGAGATTCAGAGGCCAGGGCGTCAGGCGTaGCTGAAGCTCGGCTCCAGGGCGGCCATTCTGAAA +
Preference number: 3 (lower is better)
Translates to: ETVEIQRPGRQA*LKLGSRAAILK
Trigger: TTTCAGAATGGCCGCCCTGGAGCCGAGCTTCAGCCACGCCTGACGCCCTGGCCTCTGAATCTCCACTGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGTCCATAAGCAGCACGTaGGGTGTCTGCTTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGSISST*GVCFPS
Trigger: AGAAGGGAAGCAGACACCCAACGTGCTGCTTATGGA...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp GTCCTTGCGGATGATGCTCCCCCTTCTGCGATCTTGCTTGCCATAGAGTTGGGGAGGTGCCAACCCCCTTaGGGTCTCAGGGGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: VLADDAPPSAILLAIELGRCQPP*GLRGGQ
Trigger: CTGCCCTCCCCTGAGACCCAAAGGGGGTTGGCACCT...CCCCAACTCTATGGCAAGCAAGATCGCAGAAGGGGGAGCATCATCCGCAAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp GTGTCTGCTGCCGCATGCCCGGGGAAAGGTCAGCTCTaGGTCAAAGGGACCTGCTTTATCAGGAGGGGCTAC +
Preference number: 3 (lower is better)
Translates to: VSAAACPGKGQL*VKGTCFIRRGY
Trigger: GTAGCCCCTCCTGATAAAGCAGGTCCCTTTGACCCAGAGCTGACCTTTCCCCGGGCATGCGGCAGCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp AGGAGAACACCCCAGAGACCGAGTCCACTGGGTGGCTaGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTC +
Preference number: 3 (lower is better)
Translates to: RRTPQRPSPLGG*WSWPRWNCSHV
Trigger: GACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCACCCAGTGGACTCGGTCTCTGGGGTGTTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp CATGAGGAGAACACCCCAGAGACCGAGTCCACTGGGTaGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCA +
Preference number: 3 (lower is better)
Translates to: HEENTPETESTG*LVVLASLELQP
Trigger: TGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCACCCAGTGGACTCGGTCTCTGGGGTGTTCTCCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp CTCTCTTCTGGGGACCTTCCCAGGAAGCCCAGAACCTaGACCCTCCTAGAGTCCATGAGTGGCCCTGAGCAG +
Preference number: 3 (lower is better)
Translates to: LSSGDLPRKPRT*TLLESMSGPEQ
Trigger: CTGCTCAGGGCCACTCATGGACTCTAGGAGGGTCCAGGTTCTGGGCTTCCTGGGAAGGTCCCCAGAAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGGCTGGGAATCGGCACTaGTTGTTACGGATCACACAA +
Preference number: 3 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGAGNRH*LLRITQ
Trigger: TTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGC...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR TCA 72 bp TCTAAAGCAATCGAAGCCTTTTCAGCCGACCACAGCTaGAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGA +
Preference number: 3 (lower is better)
Translates to: SKAIEAFSADHS*RSPTPQPPGQG
Trigger: TCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAGGCTTCGATTGCTTTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp CCTTGGCCTCTAGGCTGTTTTGTTCACCGCAGGGCCCACCCAACGCAGCTCAGGTCCATAAGCAGCACGTaGGGTGTCTGCTTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: PWPLGCFVHRRAHPTQLRSISST*GVCFPS
Trigger: AGAAGGGAAGCAGACACCCAACGTGCTGCTTATGGA...CCTGAGCTGCGTTGGGTGGGCCCTGCGGTGAACAAAACAGCCTAGAGGCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTGGCCTGAAGGCCTCTTaGTCAGGCATGATGGCTTCT +
Preference number: 3 (lower is better)
Translates to: WLVVLASLELQPCLRTAAGLKAS*SGMMAS
Trigger: AGAAGCCATCATGCCTGACAAAGAGGCCTTCAGGCC...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp AAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGAGAAACCGGCCTCTCTCCCCTGTGGACAGAAAGTaGGGCCCAGGCTGCCATCTG +
Preference number: 3 (lower is better)
Translates to: KGPALSGGATSQRNRPLSPVDRK*GPGCHL
Trigger: CAGATGGCAGCCTGGGCCCAACTTTCTGTCCACAGG...GGAGAGAGGCCGGTTTCTCTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp CCTTGGCCTCTAGGCTGTTTTGTTCACCGCAGGGCCCACCCAACGCAGCTCAGGGGGAATCGGCACTTGTaGTTACGGATCACACAACTG +
Preference number: 3 (lower is better)
Translates to: PWPLGCFVHRRAHPTQLRGNRHL*LRITQL
Trigger: CAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCC...CCTGAGCTGCGTTGGGTGGGCCCTGCGGTGAACAAAACAGCCTAGAGGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGGCTGTTCCACGGCCATaGTTGGGAGCAGCTGCCACT +
Preference number: 3 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGAVPRP*LGAAAT
Trigger: AGTGGCAGCTGCTCCCAACAATGGCCGTGGAACAGC...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 72 bp CCGGGCTATGGCAGAGGCCCGCACTGCACATTTGTTTaGACAATAGCCCTGTGGACAGAAAGTTGGGCCCAG +
Preference number: 3 (lower is better)
Translates to: PGYGRGPHCTFV*TIALWTESWAQ
Trigger: CTGGGCCCAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTGCCATAGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 72 bp AAGTGGTTTATGATCCTCCTGCGCAGGTGTGTCTGCTaGCGCATGCCCGGGGAAAGGTCAGCTCTGGGTCAA +
Preference number: 3 (lower is better)
Translates to: KWFMILLRRCVC*RMPGERSALGQ
Trigger: TTGACCCAGAGCTGACCTTTCCCCGGGCATGCGGCAGCAGACACACCTGCGCAGGAGGATCATAAACCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 72 bp TGTAAGTGGTTTATGATCCTCCTGCGCAGGTGTGTCTaGTGCCGCATGCCCGGGGAAAGGTCAGCTCTGGGT +
Preference number: 3 (lower is better)
Translates to: CKWFMILLRRCV*CRMPGERSALG
Trigger: ACCCAGAGCTGACCTTTCCCCGGGCATGCGGCAGCAGACACACCTGCGCAGGAGGATCATAAACCACTTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp TTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGCTGTGGCGCCAGGCGTaGGTGTCCACGGTCAGAAAT +
Preference number: 3 (lower is better)
Translates to: FHHCTKFSWMALFHGHCWLWRQA*VSTVRN
Trigger: ATTTCTGACCGTGGACACCAACGCCTGGCGCCACAG...CCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 72 bp CTGGGAATCGGCACTTGTTGTTACGGATCACACAACTaGTCCAGGGACAGGATGGGAGCCTGGAGAAAGGGG +
Preference number: 3 (lower is better)
Translates to: LGIGTCCYGSHN*SRDRMGAWRKG
Trigger: CCCCTTTCTCCAGGCTCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 72 bp TGCCCGGGGAAAGGTCAGCTCTGGGTCAAAGGGACCTaGTTTATCAGGAGGGGCTACTTCTCAGAGAAACCG +
Preference number: 3 (lower is better)
Translates to: CPGKGQLWVKGT*FIRRGYFSEKP
Trigger: CGGTTTCTCTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTTTGACCCAGAGCTGACCTTTCCCCGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR GCA 72 bp TGGCTGCTAGTGGCCCTGAACAGGCATTTCCATCACTaGACAAAGTTCTCGTGGATGGCGCTGTTCCACGGC +
Preference number: 3 (lower is better)
Translates to: WLLVALNRHFHH*TKFSWMALFHG
Trigger: GCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAATGCCTGTTCAGGGCCACTAGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp GGCCCGCACTGCACATTTGTTTGCACAATAGCCCTGTaGACAGAAAGTTGGGCCCAGGCTGCCATCTGTGCT +
Preference number: 3 (lower is better)
Translates to: GPHCTFVCTIAL*TESWAQAAICA
Trigger: AGCACAGATGGCAGCCTGGGCCCAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACATGGGAGACTCCTGCTTaGGAAGGCCCTGATTTTGGA +
Preference number: 3 (lower is better)
Translates to: GIRELGELKDKPHKAEGTWETPA*EGPDFG
Trigger: TCCAAAATCAGGGCCTTCCAAAGCAGGAGTCTCCCA...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp AAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTaGGAGCAGCTGCCACTGATGCCACCAGAAAACAAG +
Preference number: 3 (lower is better)
Translates to: KFSWMALFHGHC*EQLPLMPPENK
Trigger: CTTGTTTTCTGGTGGCATCAGTGGCAGCTGCTCCCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp GAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTaGGTACAGTTTCCGTATCCACAAAACAGAGCTGCC +
Preference number: 3 (lower is better)
Translates to: EGAEGSSPAASS*VQFPYPQNRAA
Trigger: GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGGCTGGGAATCGGCACTaGTTGTTACGGATCACACAA +
Preference number: 3 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPAGNRH*LLRITQ
Trigger: TTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGC...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR TCA 72 bp AGAAACCGGCCTCTCTCCTGCAGAACTGTGACCCGCTaGGCTCAATCAAGTGAGCTCAGACACAAAGGAGCT +
Preference number: 3 (lower is better)
Translates to: RNRPLSCRTVTR*AQSSELRHKGA
Trigger: AGCTCCTTTGTGTCTGAGCTCACTTGATTGAGCTCAGCGGGTCACAGTTCTGCAGGAGAGAGGCCGGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR TCA 72 bp CTTCTCAGAGAAACCGGCCTCTCTCCTGCAGAACTGTaGCCCGCTGAGCTCAATCAAGTGAGCTCAGACACA +
Preference number: 3 (lower is better)
Translates to: LLRETGLSPAEL*PAELNQVSSDT
Trigger: TGTGTCTGAGCTCACTTGATTGAGCTCAGCGGGTCACAGTTCTGCAGGAGAGAGGCCGGTTTCTCTGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp TTTGTCAGGCATGATGGCTTCTGCCAAGAACATCTGTaGCGCCAGGCGTTGGTGTCCACGGTCAGAAATGTG +
Preference number: 3 (lower is better)
Translates to: FVRHDGFCQEHL*RQALVSTVRNV
Trigger: CACATTTCTGACCGTGGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCTGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp CTGAACAGGCATTTCCATCACTGCACAAAGTTCTCGTaGATGGCGCTGTTCCACGGCCATTGTTGGGAGCAG +
Preference number: 3 (lower is better)
Translates to: LNRHFHHCTKFS*MALFHGHCWEQ
Trigger: CTGCTCCCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAATGCCTGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp AAGCAATCGAAGCCTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCGTAAGTGTCGCCTGTaGCTGTATTCACATTTGTGC +
Preference number: 3 (lower is better)
Translates to: KQSKPFQPTTAEGVPHRSRKCRL*LYSHLC
Trigger: GCACAAATGTGAATACAGCAACAGGCGACACTTACG...GCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAGGCTTCGATTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGGCACTGCACATTTGTTaGCACAATAGCCCTGTGGAC +
Preference number: 3 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGALHIC*HNSPVD
Trigger: GTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGC...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp AGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCGCAAAGGGACTTGCCTaGAGGGAATTCAAAAGCCCC +
Preference number: 3 (lower is better)
Translates to: SPAASSWVQFPYPQNRAAAKGLA*REFKSP
Trigger: GGGGCTTTTGAATTCCCTCAAGGCAAGTCCCTTTGC...GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp TCATCTTTCCGAATTACTGGGCTAGGCAGGAAATGCAATCCCCAAAGAGACACTCTGTGGCGCCAGGCGTaGGTGTCCACGGTCAGAAAT +
Preference number: 3 (lower is better)
Translates to: SSFRITGLGRKCNPQRDTLWRQA*VSTVRN
Trigger: ATTTCTGACCGTGGACACCAACGCCTGGCGCCACAG...AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCGGCCTGAAGGCCTCTTaGTCAGGCATGATGGCTTCT +
Preference number: 3 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCGLKAS*SGMMAS
Trigger: AGAAGCCATCATGCCTGACAAAGAGGCCTTCAGGCC...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp GTGAGCTCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACTGGGAGACTCCTGCTTaGGAAGGCCCTGATTTTGGA +
Preference number: 3 (lower is better)
Translates to: VSSDTKELGIGTCCYGSHWETPA*EGPDFG
Trigger: TCCAAAATCAGGGCCTTCCAAAGCAGGAGTCTCCCA...GTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGAGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp TTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGGCACTGCACATTTGTTaGCACAATAGCCCTGTGGAC +
Preference number: 3 (lower is better)
Translates to: FHHCTKFSWMALFHGHCWALHIC*HNSPVD
Trigger: GTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGC...CCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR-3UTR CAA 90 bp AGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCGGGAATCGGCACTTGTaGTTACGGATCACACAACTG +
Preference number: 3 (lower is better)
Translates to: SPAASSWVQFPYPQNRAAGNRHL*LRITQL
Trigger: CAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCC...GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR TCA 72 bp GCACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTaGAAGTCATCTTTCCGAATTACTGGGCTAGGCAGG +
Preference number: 3 (lower is better)
Translates to: ARQIKPESSLWT*KSSFRITGLGR
Trigger: CCTGCCTAGCCCAGTAATTCGGAAAGATGACTTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp ACATTTGTTTGCACAATAGCCCTGTGGACAGAAAGTTaGGCCCAGGCTGCCATCTGTGCTAACACTACCTAT +
Preference number: 3 (lower is better)
Translates to: TFVCTIALWTES*AQAAICANTTY
Trigger: ATAGGTAGTGTTAGCACAGATGGCAGCCTGGGCCCAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CCA 72 bp TTCACTGTGGACGTGAAAGTCATCTTTCCGAATTACTaGGCTAGGCAGGAAATGCAATCCCCAAAGAGACAC +
Preference number: 3 (lower is better)
Translates to: FTVDVKVIFPNY*ARQEMQSPKRH
Trigger: GTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGACTTTCACGTCCACAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
CDS-3UTR CCA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTACAGAAGGGGCAGGAGTaGCGGACGCGGGCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALQKGQE*RTRAEV
Trigger: CACCTCGGCCCGCGTCCGCCACTCCTGCCCCTTCTG...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGAGGTGGAGGCCCCTCTaGGCCTCAGTGGACGGTGTG +
Preference number: 4 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGRWRPL*ASVDGV
Trigger: CACACCGTCCACTGAGGCCCAGAGGGGCCTCCACCT...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGGGGGCCCAGCTGAGTTaGAGAAGGAGCGTGTCACCC +
Preference number: 4 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGGAQLS*RRSVSP
Trigger: GGGTGACACGCTCCTTCTCCAACTCAGCTGGGCCCC...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp CCTTGGCCTCTAGGCTGTTTTGTTCACCGCAGGGCCCACCCAACGCAGCTCAGGGGCGCTCCTCGTTGGTaGCAGCCAAGCGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: PWPLGCFVHRRAHPTQLRGAPRW*QPSAWH
Trigger: GTGCCATGCGCTTGGCTGTCACCAACGAGGAGCGCC...CCTGAGCTGCGTTGGGTGGGCCCTGCGGTGAACAAAACAGCCTAGAGGCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp GTCCTTGCGGATGATGCTCCCCCTTCTGCGATCTTGCTTGCCATAGAGTTGGGGCGAGCGCCAGCACGATaGGGGAGCGGCCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: VLADDAPPSAILLAIELGRAPAR*GSGPGT
Trigger: AGTGCCCGGGCCGCTCCCGCATCGTGCTGGCGCTCG...CCCCAACTCTATGGCAAGCAAGATCGCAGAAGGGGGAGCATCATCCGCAAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp CAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGATAAAGGACTGGAGGTCTCCCCGAGGTTGCTaGAGCCGGACGACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: QLKESHTAAPRAGIKDWRSPRGC*SRTTGA
Trigger: AGCACCAGTCGTCCGGCTGCAGCAACCTCGGGGAGA...CCTCCAGTCCTTTATCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp GTCAGGCATGATGGCTTCTGCCAAGAACATCTGTGGCGCCAGGCGTTGGTGTCCGGCTGTGAGCTGACGTaGAGCCCGGGGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VRHDGFCQEHLWRQALVSGCELT*SPGPGL
Trigger: GAGCCCAGGCCCCGGGCTGCACGTCAGCTCACAGCC...GGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp CAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGATAAAGGACTGGAGGAGCGTGGCCGCTCTTTaGAGGTCGCTGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: QLKESHTAAPRAGIKDWRSVAAL*RSLGRA
Trigger: AGCCCTTCCCAGCGACCTCCAAAGAGCGGCCACGCT...CCTCCAGTCCTTTATCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp CAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGATAAAGGACTGGAGGAGGCCCAGGAGATGGTaGGTTCCTCCAACCCCCGCA +
Preference number: 4 (lower is better)
Translates to: QLKESHTAAPRAGIKDWRRPRRW*VPPTPA
Trigger: TGCGGGGGTTGGAGGAACCCACCATCTCCTGGGCCT...CCTCCAGTCCTTTATCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGGGCTGGGGTCAACGGTaGTGTCACAGCAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGGWGQR*CHSRCQ
Trigger: TTGGCACCTGCTGTGACACCACCGTTGACCCCAGCC...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp CAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGATAAAGGACTGGAGGACACGACGGCCTGTGTaGAGAGGCATCGCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: QLKESHTAAPRAGIKDWRTRRPV*RGIACH
Trigger: ATGGCAGGCGATGCCTCTTCACACAGGCCGTCGTGT...CCTCCAGTCCTTTATCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp CCTTGGCCTCTAGGCTGTTTTGTTCACCGCAGGGCCCACCCAACGCAGCTCAGGTCAGCCGACCACAGCTaGAGGAGTCCCACACCGCAG +
Preference number: 4 (lower is better)
Translates to: PWPLGCFVHRRAHPTQLRSADHS*RSPTPQ
Trigger: CTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGA...CCTGAGCTGCGTTGGGTGGGCCCTGCGGTGAACAAAACAGCCTAGAGGCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AAGCAATCGAAGCCTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCGAGCGCCATCTGCGTaGCCCCGAGCGCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: KQSKPFQPTTAEGVPHRSRAPSA*PRAPAR
Trigger: TCGTGCTGGCGCTCGGGGCCACGCAGATGGCGCTCG...GCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAGGCTTCGATTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTAGGTTCGGAGGGTGCTaGGGCGCCCACAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: WLVVLASLELQPCLRTAARFGGC*GAHRAI
Trigger: GATGGCCCTGTGGGCGCCCCAGCACCCTCCGAACCT...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp CAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGATAAAGGACTGGAGGCGCTGGGAAGGGCTCTaGTGTTGGCCGTTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: QLKESHTAAPRAGIKDWRRWEGL*CWPLVS
Trigger: ACTGACCAACGGCCAACACCAGAGCCCTTCCCAGCG...CCTCCAGTCCTTTATCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp CCTTGGCCTCTAGGCTGTTTTGTTCACCGCAGGGCCCACCCAACGCAGCTCAGGGCAGCTCAGGGGCTGTaGCTGCTAGTGGCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: PWPLGCFVHRRAHPTQLRAAQGL*LLVALN
Trigger: GTTCAGGGCCACTAGCAGCCACAGCCCCTGAGCTGC...CCTGAGCTGCGTTGGGTGGGCCCTGCGGTGAACAAAACAGCCTAGAGGCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGTCCTGGGCTGTGAGCTaGCGTGCAGCCCGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGSWAVS*RAARGL
Trigger: CAGGCCCCGGGCTGCACGTCAGCTCACAGCCCAGGA...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGGACAGGATGGGAGCCTCATCCGAGCGCCATCTaGGTGGCCCCGAGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SALVVTDHTTAPGTGWEPHPSAI*VAPSAS
Trigger: GCTGGCGCTCGGGGCCACGCAGATGGCGCTCGGATG...AGGCTCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGGGCAGGTTCGGAGGGTaGTGGGGCGCCCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: FHHCTKFSWMALFHGHCWGRFGG*WGAHRA
Trigger: GGCCCTGTGGGCGCCCCAGCACCCTCCGAACCTGCC...CCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp GTCAGGCATGATGGCTTCTGCCAAGAACATCTGTGGCGCCAGGCGTTGGTGTCCCTGCGCAGGTGTGTCTaGTGCCGCATGCCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: VRHDGFCQEHLWRQALVSLRRCV*CRMPGE
Trigger: TTCCCCGGGCATGCGGCAGCAGACACACCTGCGCAG...GGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGCAAGCTGGGCGTGTCTaGTTCTCCATAAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGQAGRV*FSISST
Trigger: CGTGCTGCTTATGGAGAAGCAGACACGCCCAGCTTG...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTACCCTCTGGGCCTCAGTaGACGGTGTGCAGGTGTACT +
Preference number: 4 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALPSGPQ*TVCRCT
Trigger: AGTACACCTGCACACCGTCCACTGAGGCCCAGAGGG...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp CCTTGGCCTCTAGGCTGTTTTGTTCACCGCAGGGCCCACCCAACGCAGCTCAGGGACAGGATGGGAGCCTaGAGAAAGGGGGCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PWPLGCFVHRRAHPTQLRDRMGA*RKGAQE
Trigger: CTCTTGGGCCCCCTTTCTCCAGGCTCCCATCCTGTC...CCTGAGCTGCGTTGGGTGGGCCCTGCGGTGAACAAAACAGCCTAGAGGCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp CAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGATAAAGGACTGGAGGGGGGAGGGCACAGTGTaGGTGTTCCAAAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: QLKESHTAAPRAGIKDWRGEGTV*VFQKLG
Trigger: GCCAAGTTTTTGGAACACTCACACTGTGCCCTCCCC...CCTCCAGTCCTTTATCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTTCTGCCCCGGCTGCATaGGGAGAACACCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: WLVVLASLELQPCLRTAASAPAA*GEHPRD
Trigger: GTCTCTGGGGTGTTCTCCTCATGCAGCCGGGGCAGA...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTCGCGGCGAAGCTGACTaGCACGATGAGGCATCCGAG +
Preference number: 4 (lower is better)
Translates to: WLVVLASLELQPCLRTAARGEAD*HDEASE
Trigger: CTCGGATGCCTCATCGTGGCAGTCAGCTTCGCCGCG...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp GTCAGGCATGATGGCTTCTGCCAAGAACATCTGTGGCGCCAGGCGTTGGTGTCCGGGGTAACAGTTCCCTaGCCACACCGCCCCCAGATC +
Preference number: 4 (lower is better)
Translates to: VRHDGFCQEHLWRQALVSGVTVP*PHRPQI
Trigger: GATCTGGGGGCGGTGTGGGCAGGGAACTGTTACCCC...GGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp CCTTGGCCTCTAGGCTGTTTTGTTCACCGCAGGGCCCACCCAACGCAGCTCAGGTCCCCAAAGAGACACTaGTCGGCTCCCCTCGAGAGA +
Preference number: 4 (lower is better)
Translates to: PWPLGCFVHRRAHPTQLRSPKRH*SAPLER
Trigger: TCTCTCGAGGGGAGCCGAGCAGTGTCTCTTTGGGGA...CCTGAGCTGCGTTGGGTGGGCCCTGCGGTGAACAAAACAGCCTAGAGGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACACGCAGGTGTGTCTGCTaGCGCATGCCCGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GIRELGELKDKPHKAEGTRRCVC*RMPGER
Trigger: CCTTTCCCCGGGCATGCGGCAGCAGACACACCTGCG...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AAGCAATCGAAGCCTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCAGGGCCATCGGGGGATaGGCTGGAACCTGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: KQSKPFQPTTAEGVPHRSRAIGG*AGTWRS
Trigger: GCTACGCCAGGTTCCAGCCCATCCCCCGATGGCCCT...GCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAGGCTTCGATTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
3UTR CAA 72 bp ACCCCAGAGACCGAGTCCACTGGGTGGCTGGTGGTCTaGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: TPETESTGWLVV*ASLELQPCLRT
Trigger: AGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCACCCAGTGGACTCGGTCTCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
CDS-3UTR TCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGTGGAGAACGGTGCCGTaGGGAGTCACGCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGWRTVP*GVTQVG
Trigger: CCCCACCTGCGTGACTCCTCACGGCACCGTTCTCCA...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TCAAGGTGCTGCACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTGAAAGTCGGCGTCAGGCGTGGCTaGAGCTCGGCTCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: SRCCTPDKTREFTVDVKVGVRRG*SSAPGR
Trigger: CCGCCCTGGAGCCGAGCTTCAGCCACGCCTGACGCC...GACTTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGCAGCACCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp GTCAGGCATGATGGCTTCTGCCAAGAACATCTGTGGCGCCAGGCGTTGGTGTCCTGCCTTAGCAGCCTCTaGGAGTCAGCATGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VRHDGFCQEHLWRQALVSCLSSL*ESAWVG
Trigger: CCCCACCCATGCTGACTCTCAGAGGCTGCTAAGGCA...GGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGATGGCACCCACCATGTaGTGTGCCTCGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPMAPTM*CASVGR
Trigger: CCTCCCCACCGAGGCACAGCACATGGTGGGTGCCAT...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp AAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGAGAAACCGGCCTCTCTCCGGCCTCTGCCCCGGCTaGATGAGGAGAACACCCCAG +
Preference number: 4 (lower is better)
Translates to: KGPALSGGATSQRNRPLSGLCPG*MRRTPQ
Trigger: CTGGGGTGTTCTCCTCATGCAGCCGGGGCAGAGGCC...GGAGAGAGGCCGGTTTCTCTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp ACAGGAAATAGGCCAGAGCGTGATGAACGCCTAATGATAGAGCCATCGAGCCACTGGCTGGCAGGGGGCTaGCCCACCACCGCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: TGNRPERDERLMIEPSSHWLAGG*PTTASY
Trigger: GTACGAGGCGGTGGTGGGCCAGCCCCCTGCCAGCCA...GTGGCTCGATGGCTCTATCATTAGGCGTTCATCACGCTCTGGCCTATTTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGTTGGGTCCCCGGAGCTaGACTCGGCCACCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGLGPRS*TRPPAD
Trigger: GTCAGCAGGTGGCCGAGTCCAGCTCCGGGGACCCAA...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTAGCTTGTGCTGTCAGCTaGTACTGGAGTGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALACAVS*YWSAEA
Trigger: GGCTTCAGCACTCCAGTACCAGCTGACAGCACAAGC...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACACCCGACAGGCAGCCGTaGCAGAGCGAGACATGGAAG +
Preference number: 4 (lower is better)
Translates to: GIRELGELKDKPHKAEGTPDRQP*QSETWK
Trigger: CTTCCATGTCTCGCTCTGCCACGGCTGCCTGTCGGG...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGCCCGCTGGTGAAAGCTaGGCCCGACAGGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: FHHCTKFSWMALFHGHCWPAGES*ARQAAV
Trigger: CACGGCTGCCTGTCGGGCCCAGCTTTCACCAGCGGG...CCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AAGCAATCGAAGCCTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCTGGCACCCAGGAGTaGAAGACACCCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: KQSKPFQPTTAEGVPHRSPGTQE*KTPSGP
Trigger: GGGACCAGAGGGTGTCTTCCACTCCTGGGTGCCAGG...GCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAGGCTTCGATTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACAAGGAGACGACACCTATaGGTCCCGACAGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: GIRELGELKDKPHKAEGTRRRHL*VPTAAP
Trigger: CGGTGCTGCTGTCGGGACTCATAGGTGTCGTCTCCT...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGGACAGGATGGGAGCCTCCGCCAAGCTGGGCCTaGAGGCCTCTTTGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SALVVTDHTTAPGTGWEPPPSWA*RPLCQA
Trigger: TGCCTGACAAAGAGGCCTTCAGGCCCAGCTTGGCGG...AGGCTCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp GTCCTTGCGGATGATGCTCCCCCTTCTGCGATCTTGCTTGCCATAGAGTTGGGGTCTGGTGGAGAACGGTaGCGTGAGGAGTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: VLADDAPPSAILLAIELGSGGER*REESRR
Trigger: CCTGCGTGACTCCTCACGGCACCGTTCTCCACCAGA...CCCCAACTCTATGGCAAGCAAGATCGCAGAAGGGGGAGCATCATCCGCAAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp AAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGAGAAACCGGCCTCTCTCCGGTCCAGTAGGCCTCTaGCCCGGCTGCATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: KGPALSGGATSQRNRPLSGPVGL*PGCMRR
Trigger: TCTCCTCATGCAGCCGGGGCAGAGGCCTACTGGACC...GGAGAGAGGCCGGTTTCTCTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp GTCCTTGCGGATGATGCTCCCCCTTCTGCGATCTTGCTTGCCATAGAGTTGGGGCCTATACTTGTAACCTaGCTGGCAGGGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VLADDAPPSAILLAIELGPILVT*LAGGWP
Trigger: GGGCCAGCCCCCTGCCAGCCAGGTTACAAGTATAGG...CCCCAACTCTATGGCAAGCAAGATCGCAGAAGGGGGAGCATCATCCGCAAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AAGCAATCGAAGCCTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCTGGCAGAGCGAGACATaGAAGCGCTCCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: KQSKPFQPTTAEGVPHRSWQSET*KRSQAQ
Trigger: CTGTGCCTGGGAGCGCTTCCATGTCTCGCTCTGCCA...GCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAGGCTTCGATTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp ACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGCCAGGGCGTCAGGCGTaGCTGAAGCTCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TKELGIGTCCYGSHNCSRPGRQA*LKLGSR
Trigger: CCTGGAGCCGAGCTTCAGCCACGCCTGACGCCCTGG...CCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACAAGAGACCGAGTCCACTaGGTGGCTGGTGGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GIRELGELKDKPHKAEGTRDRVH*VAGGLG
Trigger: GCCAAGACCACCAGCCACCCAGTGGACTCGGTCTCT...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGAGAAACCGGCCTCTCTCCGCGCAAACCCAGAGCTaGGTGAAGGTGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KGPALSGGATSQRNRPLSAQTQS*VKVGCR
Trigger: CCTGCACCCCACCTTCACCCAGCTCTGGGTTTGCGC...GGAGAGAGGCCGGTTTCTCTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGTTGTGGCCCCCAGGCTaGGGTCAACGGTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGLWPPG*GQRWCH
Trigger: GTGACACCACCGTTGACCCCAGCCTGGGGGCCACAA...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AAGCAATCGAAGCCTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCACTCAGCAACCTTGTaGCCCCCAGGCTGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: KQSKPFQPTTAEGVPHRSHSATL*PPGWGQ
Trigger: TTGACCCCAGCCTGGGGGCCACAAGGTTGCTGAGTG...GCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAGGCTTCGATTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGGGGGTTGGCAGGATGTaGCCTCTGCGGAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPGVGRM*PLRKEH
Trigger: ATGTTCCTTCCGCAGAGGTCACATCCTGCCAACCCC...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp AAGCAATCGAAGCCTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCGCAGGCCGGGGCTATTaGTGGCCACGTCATACAAAG +
Preference number: 4 (lower is better)
Translates to: KQSKPFQPTTAEGVPHRSAGRGY*WPRHTK
Trigger: CTTTGTATGACGTGGCCATCAATAGCCCCGGCCTGC...GCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAGGCTTCGATTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TTTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGCTTTCTCCTGGGCTGTaGGCTGACGTGCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: FPSLHKVLVDGAVPRPLLLSPGL*ADVQPG
Trigger: CCCGGGCTGCACGTCAGCTCACAGCCCAGGAGAAAG...CAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp ACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGGCGTCTCCCCGAGGTTaGTGCAGCCGGACGACTGGT +
Preference number: 4 (lower is better)
Translates to: TKELGIGTCCYGSHNCSRASPRG*CSRTTG
Trigger: ACCAGTCGTCCGGCTGCAGCAACCTCGGGGAGACGC...CCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGATTGGGACCGGGCCCTaGTGCAGAGAAGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPIGTGP*CREGKD
Trigger: ATCCTTCCCTTCTCTGCAGCAGGGCCCGGTCCCAAT...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTGGTGTCACAGCAGGTaGCAACCCCCTTTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPWCHSR*QPPLGL
Trigger: GAGACCCAAAGGGGGTTGGCACCTGCTGTGACACCA...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AAGGTCAGCTCTGGGTCAAAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGGGGTGGAGGCGGGAGTaGGGGGATGAACTCGTCGAA +
Preference number: 4 (lower is better)
Translates to: KVSSGSKGPALSGGATSQGWRRE*GDELVE
Trigger: TTCGACGAGTTCATCCCCCCACTCCCGCCTCCACCC...CTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTTTGACCCAGAGCTGACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp CTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGAAGTTAAATGGGGGATaGGAGACTCCTGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LFSRPQLKESHTAAPRAGKLNGG*ETPALE
Trigger: TTCCAAAGCAGGAGTCTCCCATCCCCCATTTAACTT...CCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AAGCAATCGAAGCCTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCGCACCTCAGAGACAGTaGAGATTCAGAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KQSKPFQPTTAEGVPHRSAPQRQ*RFRGQG
Trigger: GCCCTGGCCTCTGAATCTCCACTGTCTCTGAGGTGC...GCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAGGCTTCGATTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp CAGAGGCCCGCACTGCACATTTGTTTGCACAATAGCCCTGTGGACAGAAAGTTGAGCCCCATTGGCCATTaGGACCGGGCCCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QRPALHICLHNSPVDRKLSPIGH*DRALLQ
Trigger: CTGCAGCAGGGCCCGGTCCCAATGGCCAATGGGGCT...CAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCAAGGTGCTGCACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTGAAAGTCGGGCAGCAGCCCCATTaGCCATTGGGACCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SRCCTPDKTREFTVDVKVGQQPH*PLGPGP
Trigger: AGGGCCCGGTCCCAATGGCCAATGGGGCTGCTGCCC...GACTTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGCAGCACCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTAGGAAGCCCAGAACCTaGACCCTCCTAGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: WLVVLASLELQPCLRTAARKPRT*TLLESM
Trigger: CATGGACTCTAGGAGGGTCCAGGTTCTGGGCTTCCT...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCGTGCAGCCCGGGGCCTaGGCTCTTGCTGCTGGTACC +
Preference number: 4 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCVQPGA*ALAAGT
Trigger: GGTACCAGCAGCAAGAGCCCAGGCCCCGGGCTGCAC...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
3UTR CAA 72 bp GCCGGGCTATGGCAGAGGCCCGCACTGCACATTTGTTaGCACAATAGCCCTGTGGACAGAAAGTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: AGLWQRPALHIC*HNSPVDRKLGP
Trigger: TGGGCCCAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTGCCATAGCCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
CDS-3UTR TCA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACAGACTCGGCCACCTGCTaGCCTATACTTGTAACCTGG +
Preference number: 4 (lower is better)
Translates to: GIRELGELKDKPHKAEGTDSATC*PILVTW
Trigger: CCAGGTTACAAGTATAGGTCAGCAGGTGGCCGAGTC...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACACTGGTACTGGAGTGCTaGAGCCAGCACTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: GIRELGELKDKPHKAEGTLVLEC*SQHWCL
Trigger: CAAACACCAGTGCTGGCTTCAGCACTCCAGTACCAG...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TCATCTTTCCGAATTACTGGGCTAGGCAGGAAATGCAATCCCCAAAGAGACACTTGGGTCCCCCGCTGGTaGAAGCTGGGCCCGACAGGC +
Preference number: 4 (lower is better)
Translates to: SSFRITGLGRKCNPQRDTWVPRW*KLGPTG
Trigger: GCCTGTCGGGCCCAGCTTTCACCAGCGGGGGACCCA...AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TCATCTTTCCGAATTACTGGGCTAGGCAGGAAATGCAATCCCCAAAGAGACACTGAGGGAACAGCAGCGTaGGCCCCCTGCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: SSFRITGLGRKCNPQRDTEGTAA*APCPGT
Trigger: GGTGCCAGGGCAGGGGGCTCACGCTGCTGTTCCCTC...AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp GTGAGCTCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACCAGCACCGAGAAGCCTaGCCAGAAGGGGCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: VSSDTKELGIGTCCYGSHQHREA*PEGAGV
Trigger: CACTCCTGCCCCTTCTGGGCAGGCTTCTCGGTGCTG...GTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGAGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp AGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCCAGCCGGACGACTGGTaGTGCAGCTCACAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SPAASSWVQFPYPQNRAAQPDDW*CSSQQT
Trigger: TGTCTGCTGTGAGCTGCAGCACCAGTCGTCCGGCTG...GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGGACAGGATGGGAGCCTGCACCTGTGAGCCCATaGCAGGATCCTCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: SALVVTDHTTAPGTGWEPAPVSP*QDPLET
Trigger: TGTCTCCAGAGGATCCTGGCATGGGCTCACAGGTGC...AGGCTCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTTACGGATCACACAACTaGTCCAGGGACAGGATGGGA +
Preference number: 4 (lower is better)
Translates to: WLVVLASLELQPCLRTAAYGSHN*SRDRMG
Trigger: TCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTA...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTTGGGTCAAAGGGACCTaGTTTATCAGGAGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: WLVVLASLELQPCLRTAAWVKGT*FIRRGY
Trigger: GTAGCCCCTCCTGATAAAGCAGGTCCCTTTGACCCA...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp GTGAGCTCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACGTGTCTGCTGCCGCATaGCCGGGGAAAGGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: VSSDTKELGIGTCCYGSHVSAAA*PGKGQL
Trigger: GAGCTGACCTTTCCCCGGGCATGCGGCAGCAGACAC...GTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGAGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTATTCTGCGATCTTGCTTaGCATAGAGTTGGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALFCDLA*HRVGVH
Trigger: ATGGACCCCAACTCTATGGCAAGCAAGATCGCAGAA...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp ACAGGAAATAGGCCAGAGCGTGATGAACGCCTAATGATAGAGCCATCGAGCCACCTGCAGCCGGACGACTaGTGCTGCAGCTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: TGNRPERDERLMIEPSSHLQPDD*CCSSQQ
Trigger: CTGCTGTGAGCTGCAGCACCAGTCGTCCGGCTGCAG...GTGGCTCGATGGCTCTATCATTAGGCGTTCATCACGCTCTGGCCTATTTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCGAGGAGTCACGCAGGTaGGGTTGGCAGGATGTGACC +
Preference number: 4 (lower is better)
Translates to: SPAASSWVQFPYPQNRAAEESRR*GWQDVT
Trigger: GGTCACATCCTGCCAACCCCACCTGCGTGACTCCTC...GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACATGTGCAGGTGTACTCTaGGGGGTAATAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GIRELGELKDKPHKAEGTCAGVL*GVIGWR
Trigger: CCTCCACCCTATTACCCCCCAGAGTACACCTGCACA...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp CAGAGGCCCGCACTGCACATTTGTTTGCACAATAGCCCTGTGGACAGAAAGTTGGCCAGCACTGGTGTTTaGGTCCCCGGAGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: QRPALHICLHNSPVDRKLASTGV*VPGAGL
Trigger: GAGTCCAGCTCCGGGGACCCAAACACCAGTGCTGGC...CAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TTTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGGATGGGCTGGAACCTaGCGTAGCAGTGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: FPSLHKVLVDGAVPRPLLGWAGT*RSSALG
Trigger: TCCGAGGGCACTGCTACGCCAGGTTCCAGCCCATCC...CAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp ACAGGAAATAGGCCAGAGCGTGATGAACGCCTAATGATAGAGCCATCGAGCCACCCCGCTTCCAGGTCCTaGCTACACGACGGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TGNRPERDERLMIEPSSHPASRS*LHDGLC
Trigger: ACACAGGCCGTCGTGTAGCCAGGACCTGGAAGCGGG...GTGGCTCGATGGCTCTATCATTAGGCGTTCATCACGCTCTGGCCTATTTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTGAAGGGCTCTGGTGTTaGCCGTTGGTCAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: WLVVLASLELQPCLRTAAEGLWC*PLVSFP
Trigger: TGGAAAACTGACCAACGGCCAACACCAGAGCCCTTC...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGGACAGGATGGGAGCCTTGCCAAGAACATCTGTaGCGCCAGGCGTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SALVVTDHTTAPGTGWEPCQEHL*RQALVS
Trigger: GGACACCAACGCCTGGCGCCACAGATGTTCTTGGCA...AGGCTCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTACAGACACAAAGGAGCTaGGAATCGGCACTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALQTQRS*ESALVV
Trigger: AACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTG...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTGGGAAAGGTCAGCTCTaGGTCAAAGGGACCTGCTTT +
Preference number: 4 (lower is better)
Translates to: WLVVLASLELQPCLRTAAGKGQL*VKGTCF
Trigger: AAAGCAGGTCCCTTTGACCCAGAGCTGACCTTTCCC...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACATTCCACGGCCATTGTTaGGAGCAGCTGCCACTGATG +
Preference number: 4 (lower is better)
Translates to: GIRELGELKDKPHKAEGTFHGHC*EQLPLM
Trigger: CATCAGTGGCAGCTGCTCCCAACAATGGCCGTGGAA...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp GTCCTTGCGGATGATGCTCCCCCTTCTGCGATCTTGCTTGCCATAGAGTTGGGGTCTCCTGCAGAACTGTaGCCCGCTGAGCTCAATCAA +
Preference number: 4 (lower is better)
Translates to: VLADDAPPSAILLAIELGSPAEL*PAELNQ
Trigger: TTGATTGAGCTCAGCGGGTCACAGTTCTGCAGGAGA...CCCCAACTCTATGGCAAGCAAGATCGCAGAAGGGGGAGCATCATCCGCAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TCATCTTTCCGAATTACTGGGCTAGGCAGGAAATGCAATCCCCAAAGAGACACTGTCCATGAGTGGCCCTaGGCAGCGGGGCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: SSFRITGLGRKCNPQRDTVHEWP*AAGLMG
Trigger: CCCCATCAGCCCCGCTGCTCAGGGCCACTCATGGAC...AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGACACCAGGAGGCTTGTaGTGTCAGCTGGTACTGGAG +
Preference number: 4 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGTPGGL*CQLVLE
Trigger: CTCCAGTACCAGCTGACAGCACAAGCCTCCTGGTGT...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TCAAGGTGCTGCACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTGAAAGTCACCCACCATGTGCTGTaGCTCGGTGGGGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: SRCCTPDKTREFTVDVKVTHHVL*LGGEGT
Trigger: TGTGCCCTCCCCACCGAGGCACAGCACATGGTGGGT...GACTTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGCAGCACCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp GTCAGGCATGATGGCTTCTGCCAAGAACATCTGTGGCGCCAGGCGTTGGTGTCCGGCAGAGGCCCGCACTaGACATTTGTTTGCACAATA +
Preference number: 4 (lower is better)
Translates to: VRHDGFCQEHLWRQALVSGRGPH*TFVCTI
Trigger: TATTGTGCAAACAAATGTGCAGTGCGGGCCTCTGCC...GGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp AAGGTCAGCTCTGGGTCAAAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGGCCATGTCTGAGGACTaGAGCTCTAGCCCACCCAAG +
Preference number: 4 (lower is better)
Translates to: KVSSGSKGPALSGGATSQAMSED*SSSPPK
Trigger: CTTGGGTGGGCTAGAGCTGCAGTCCTCAGACATGGC...CTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTTTGACCCAGAGCTGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCGGGACCGGGCCCTGCTaGAGAGAAGGGAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCGTGPC*REGKDA
Trigger: AGCATCCTTCCCTTCTCTGCAGCAGGGCCCGGTCCC...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp CAGAGGCCCGCACTGCACATTTGTTTGCACAATAGCCCTGTGGACAGAAAGTTGCACCCCGTCCCTGACTaGCTCATTTCGAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRPALHICLHNSPVDRKLHPVPD*LISKGQ
Trigger: CTGCCCCTTCGAAATGAGGCAGTCAGGGACGGGGTG...CAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGCTGTGGACAGAAAGTTaGGCCCAGGCTGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGLWTES*AQAAIC
Trigger: ACAGATGGCAGCCTGGGCCCAACTTTCTGTCCACAG...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCTCTGGGCACCTGGATTaGAACCTCACCCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SPAASSWVQFPYPQNRAASGHLD*NLTPFP
Trigger: TGGGAAGGGGGTGAGGTTCCAATCCAGGTGCCCAGA...GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCAAGGTGCTGCACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTGAAAGTCACCGAGTCCACTGGGTaGCTGGTGGTCTTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SRCCTPDKTREFTVDVKVTESTG*LVVLAS
Trigger: CGAGGCCAAGACCACCAGCCACCCAGTGGACTCGGT...GACTTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGCAGCACCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
3UTR CAA 72 bp CACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATaGTTGGGAGCAGCTGCCACTGATGCCACCAGAAAA +
Preference number: 4 (lower is better)
Translates to: HKVLVDGAVPRP*LGAAATDATRK
Trigger: TTTTCTGGTGGCATCAGTGGCAGCTGCTCCCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CAA 72 bp CGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTaGGGTACAGTTTCCGTATCCACAAAACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RRGRRFQPSGIK*GTVSVSTKQSC
Trigger: GCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
CDS-3UTR TCA 90 bp AAGCAATCGAAGCCTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCCCTCTTTGTCAGGCATaGTGGCTTCTGCCAAGAACA +
Preference number: 4 (lower is better)
Translates to: KQSKPFQPTTAEGVPHRSPLCQA*WLLPRT
Trigger: TGTTCTTGGCAGAAGCCATCATGCCTGACAAAGAGG...GCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAGGCTTCGATTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp GTCAGGCATGATGGCTTCTGCCAAGAACATCTGTGGCGCCAGGCGTTGGTGTCCTTTGTAAGTGGTTTATaGTCCTCCTGCGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VRHDGFCQEHLWRQALVSFVSGL*SSCAGV
Trigger: CACACCTGCGCAGGAGGATCATAAACCACTTACAAA...GGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCAAACCCAGAGCTGGGTaGAGGTGGGGTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCKPRAG*RWGAGE
Trigger: CTCACCTGCACCCCACCTTCACCCAGCTCTGGGTTT...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TTTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGTCAGCCTCACAGCGTTaGAGTTCTCCTGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: FPSLHKVLVDGAVPRPLLSASQR*SSPAAG
Trigger: ACCCGCTGCAGGAGAACTGCAACGCTGTGAGGCTGA...CAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp GTCCTTGCGGATGATGCTCCCCCTTCTGCGATCTTGCTTGCCATAGAGTTGGGGCTGCTCAGTTCAAGGTaGTGCACGCCAGATAAAACC +
Preference number: 4 (lower is better)
Translates to: VLADDAPPSAILLAIELGLLSSR*CTPDKT
Trigger: GGTTTTATCTGGCGTGCAGCACCTTGAACTGAGCAG...CCCCAACTCTATGGCAAGCAAGATCGCAGAAGGGGGAGCATCATCCGCAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp ACAGGAAATAGGCCAGAGCGTGATGAACGCCTAATGATAGAGCCATCGAGCCACTCAGCCCAGGGACAATaGTGTGTGAACCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: TGNRPERDERLMIEPSSHSAQGQ*CVNPQA
Trigger: GGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGA...GTGGCTCGATGGCTCTATCATTAGGCGTTCATCACGCTCTGGCCTATTTCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGTCCACAAAACAGAGCTaGCACCAGCGCAAACCCAGA +
Preference number: 4 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGSTKQS*HQRKPR
Trigger: TCTGGGTTTGCGCTGGTGGCAGCTCTGTTTTGTGGA...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCAAGGTGCTGCACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTGAAAGTCTCACGCAGGTGGGGTTaGCAGGATGTGACCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SRCCTPDKTREFTVDVKVSRRWG*QDVTSA
Trigger: CGCAGAGGTCACATCCTGCCAACCCCACCTGCGTGA...GACTTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGCAGCACCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCTGTGCTGTGCCTCGGTaGGGAGGGCACAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCCAVPR*GGHSVS
Trigger: ACTCACACTGTGCCCTCCCCACCGAGGCACAGCACA...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGCCACGGTCAGAAATGTaGCTCCTTCATACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGPRSEM*LLHTWS
Trigger: GGACCAGGTATGAAGGAGCCACATTTCTGACCGTGG...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACATCTCTGGGGAGACCTTaGCCTCTAGGCTGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: GIRELGELKDKPHKAEGTSLGRP*PLGCFV
Trigger: AACAAAACAGCCTAGAGGCCAAGGTCTCCCCAGAGA...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTACAGACAGGTCTCTGGTaGCTTGAAAACAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALQTGLW*LENNFL
Trigger: TAGGAAATTGTTTTCAAGCCACCAGAGACCTGTCTG...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTTGCTTTGGAAGGCCCTaGTTTTGGAGATACTTTGAG +
Preference number: 4 (lower is better)
Translates to: WLVVLASLELQPCLRTAACFGRP*FWRYFE
Trigger: CTCAAAGTATCTCCAAAATCAGGGCCTTCCAAAGCA...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGAGAACTGTGACCCGCTaGGCTCAATCAAGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: FHHCTKFSWMALFHGHCWRTVTR*AQSSEL
Trigger: GAGCTCACTTGATTGAGCTCAGCGGGTCACAGTTCT...CCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp ACAGGAAATAGGCCAGAGCGTGATGAACGCCTAATGATAGAGCCATCGAGCCACTGCGGAAGGAACATCTaGAGGACATCGGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: TGNRPERDERLMIEPSSHCGRNI*RTSEET
Trigger: GGTCTCCTCCGATGTCCTGCAGATGTTCCTTCCGCA...GTGGCTCGATGGCTCTATCATTAGGCGTTCATCACGCTCTGGCCTATTTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp AGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCAGGCATGATGGCTTCTaGCAAGAACATCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: SPAASSWVQFPYPQNRAARHDGF*QEHLWR
Trigger: GCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCT...GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGGACAGGATGGGAGCCTGGGCTAGGCAGGAAATaGAATCCCCAAAGAGACACT +
Preference number: 4 (lower is better)
Translates to: SALVVTDHTTAPGTGWEPGLGRK*NPQRDT
Trigger: AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCC...AGGCTCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTACATTTGTGCAACACTaGTCAGTTCAAGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: WLVVLASLELQPCLRTAATFVQH*SVQGAA
Trigger: TGCAGCACCTTGAACTGAGCAGTGTTGCACAAATGT...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp GTCAGGCATGATGGCTTCTGCCAAGAACATCTGTGGCGCCAGGCGTTGGTGTCCCTAGTACGTCTCTCCTaGAAAAGTGCAGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: VRHDGFCQEHLWRQALVSLVRLS*KSAGCH
Trigger: ATGACAACCTGCACTTTTGCAGGAGAGACGTACTAG...GGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCCAAGGGGACCACAGCTaGTGGGTCAAGTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCQGDHS*WVKLPA
Trigger: TGCTGGCAACTTGACCCAGCAGCTGTGGTCCCCTTG...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TTTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGCTGTCAGCTGGTACTaGAGTGCTGAAGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: FPSLHKVLVDGAVPRPLLAVSWY*SAEAST
Trigger: AGTGCTGGCTTCAGCACTCCAGTACCAGCTGACAGC...CAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACATCTGGTGTTGGCCGTTaGTCAGTTTTCCAGGTATCT +
Preference number: 4 (lower is better)
Translates to: GIRELGELKDKPHKAEGTSGVGR*SVFQVS
Trigger: AGATACCTGGAAAACTGACCAACGGCCAACACCAGA...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCAAGGTGCTGCACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTGAAAGTCTGTGGCGCCAGGCGTTaGTGTCCACGGTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: SRCCTPDKTREFTVDVKVCGARR*CPRSEM
Trigger: CATTTCTGACCGTGGACACCAACGCCTGGCGCCACA...GACTTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGCAGCACCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
3UTR CAA 72 bp GAGCTCAGACACAAAGGAGCTGGGAATCGGCACTTGTaGTTACGGATCACACAACTGCTCCAGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: ELRHKGAGNRHL*LRITQLLQGQD
Trigger: ATCCTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
3UTR CAA 72 bp AGTGAGCTCAGACACAAAGGAGCTGGGAATCGGCACTaGTTGTTACGGATCACACAACTGCTCCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SELRHKGAGNRH*LLRITQLLQGQ
Trigger: CTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGAGCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.4
ENST00000622117.2
CDS-3UTR TCA 90 bp CAGAGGCCCGCACTGCACATTTGTTTGCACAATAGCCCTGTGGACAGAAAGTTGCAAAGGGACTTGCCTTaGGGGAATTCAAAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: QRPALHICLHNSPVDRKLQRDLP*GNSKAP
Trigger: GGGGGCTTTTGAATTCCCTCAAGGCAAGTCCCTTTG...CAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp CAGAGGCCCGCACTGCACATTTGTTTGCACAATAGCCCTGTGGACAGAAAGTTGTCGGAGGAGACCATCTaGATACAGCACATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QRPALHICLHNSPVDRKLSEETI*IQHMAV
Trigger: CACAGCCATGTGCTGTATGCAGATGGTCTCCTCCGA...CAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp AAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGAGAAACCGGCCTCTCTCCCTCAGTTCAAGGTGCTaGACGCCAGATAAAACCAGA +
Preference number: 4 (lower is better)
Translates to: KGPALSGGATSQRNRPLSLSSRC*TPDKTR
Trigger: TCTGGTTTTATCTGGCGTGCAGCACCTTGAACTGAG...GGAGAGAGGCCGGTTTCTCTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCATCTTTCCGAATTACTGGGCTAGGCAGGAAATGCAATCCCCAAAGAGACACTGGTGGCTGGTGGTCTTaGCCTCGCTGGAATTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSFRITGLGRKCNPQRDTGGWWS*PRWNCS
Trigger: GCTGCAATTCCAGCGAGGCCAAGACCACCAGCCACC...AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCATCTTTCCGAATTACTGGGCTAGGCAGGAAATGCAATCCCCAAAGAGACACTCCACTGGGTGGCTGGTaGTCTTGGCCTCGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SSFRITGLGRKCNPQRDTPLGGW*SWPRWN
Trigger: ATTCCAGCGAGGCCAAGACCACCAGCCACCCAGTGG...AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TTTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGCCACGTCATACAAAGTaGCGAATGGAGACGGAGCAA +
Preference number: 4 (lower is better)
Translates to: FPSLHKVLVDGAVPRPLLPRHTK*RMETEQ
Trigger: TTGCTCCGTCTCCATTCGGCACTTTGTATGACGTGG...CAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGATACAAAGTGCCGAATaGAGACGGAGCAAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: FHHCTKFSWMALFHGHCWIQSAE*RRSKVQ
Trigger: CTGGACTTTGCTCCGTCTCCATTCGGCACTTTGTAT...CCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCTGCACAATAGCCCTGTaGACAGAAAGTTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCCTIAL*TESWAQ
Trigger: CTGGGCCCAACTTTCTGTCCACAGGGCTATTGTGCA...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCATCTTTCCGAATTACTGGGCTAGGCAGGAAATGCAATCCCCAAAGAGACACTAGGCTGTCCCCAAGCTaGGCGTGTCTGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SSFRITGLGRKCNPQRDTRLSPS*ACLLLH
Trigger: ATGGAGAAGCAGACACGCCCAGCTTGGGGACAGCCT...AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AAGCAATCGAAGCCTTTTCAGCCGACCACAGCTGAAGGAGTCCCACACCGCAGCTGTCATCAAAAGGCCTaGCTTATGTGTTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: KQSKPFQPTTAEGVPHRSCHQKA*LMCFQL
Trigger: GAGCTGAAAACACATAAGCCAGGCCTTTTGATGACA...GCTGCGGTGTGGGACTCCTTCAGCTGTGGTCGGCTGAAAAGGCTTCGATTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp GTGAGCTCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACCCAGCGGCATCAAGTTaGGTACAGTTTCCGTATCCA +
Preference number: 4 (lower is better)
Translates to: VSSDTKELGIGTCCYGSHPAASS*VQFPYP
Trigger: TGGATACGGAAACTGTACCCAACTTGATGCCGCTGG...GTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGAGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCAAGGTGCTGCACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTGAAAGTCCAAAGCAGCCACAGTTaGCCCATTTCAGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: SRCCTPDKTREFTVDVKVQSSHS*PISDPR
Trigger: TCTGGGATCTGAAATGGGCCAACTGTGGCTGCTTTG...GACTTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGCAGCACCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp ACAGGAAATAGGCCAGAGCGTGATGAACGCCTAATGATAGAGCCATCGAGCCACACCTGCAAAGGGACTTaGCTTGAGGGAATTCAAAAG +
Preference number: 4 (lower is better)
Translates to: TGNRPERDERLMIEPSSHTCKGT*LEGIQK
Trigger: CTTTTGAATTCCCTCAAGGCAAGTCCCTTTGCAGGT...GTGGCTCGATGGCTCTATCATTAGGCGTTCATCACGCTCTGGCCTATTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp AGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCGTACAGACAGGTCTCTaGTGGCTTGAAAACAATTTC +
Preference number: 4 (lower is better)
Translates to: SPAASSWVQFPYPQNRAAVQTGL*WLENNF
Trigger: GAAATTGTTTTCAAGCCACCAGAGACCTGTCTGTAC...GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp CAGAGGCCCGCACTGCACATTTGTTTGCACAATAGCCCTGTGGACAGAAAGTTGCTGACAAGAGAGAATTaGACCAGCCAAATTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QRPALHICLHNSPVDRKLLTREN*TSQIQH
Trigger: ATGCTGAATTTGGCTGGTTCAATTCTCTCTTGTCAG...CAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR TCA 90 bp TTTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGAGTTCACTGTGGACGTaGAAGTCATCTTTCCGAATT +
Preference number: 4 (lower is better)
Translates to: FPSLHKVLVDGAVPRPLLSSLWT*KSSFRI
Trigger: AATTCGGAAAGATGACTTTCACGTCCACAGTGAACT...CAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TTTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGCCAATTAATTTCACCTaGAAAGGGACTTGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: FPSLHKVLVDGAVPRPLLPINFT*KGTCLE
Trigger: CTCAAGGCAAGTCCCTTTGCAGGTGAAATTAATTGG...CAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp ACAGGAAATAGGCCAGAGCGTGATGAACGCCTAATGATAGAGCCATCGAGCCACATCTTTCCGAATTACTaGGCTAGGCAGGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: TGNRPERDERLMIEPSSHIFPNY*ARQEMQ
Trigger: TTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGAT...GTGGCTCGATGGCTCTATCATTAGGCGTTCATCACGCTCTGGCCTATTTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CCA 90 bp TCAAGGTGCTGCACGCCAGATAAAACCAGAGAGTTCACTGTGGACGTGAAAGTCTCAAACTTAATCAACTaGCAGCCTTCTAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SRCCTPDKTREFTVDVKVSNLIN*QPSREL
Trigger: CAACTCCCTAGAAGGCTGCCAGTTGATTAAGTTTGA...GACTTTCACGTCCACAGTGAACTCTCTGGTTTTATCTGGCGTGCAGCACCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR GCA 90 bp TCATCTTTCCGAATTACTGGGCTAGGCAGGAAATGCAATCCCCAAAGAGACACTAGGCATTTCCATCACTaGACAAAGTTCTCGTGGATG +
Preference number: 4 (lower is better)
Translates to: SSFRITGLGRKCNPQRDTRHFHH*TKFSWM
Trigger: CATCCACGAGAACTTTGTGCAGTGATGGAAATGCCT...AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS GCA 90 bp GCGGACGCGGGCCGAGGTGGTGAGCGCCAGCGCGGCGAAGCTGACTaGCACGATGAGGCATCCGAGCGCCATCTGCGTGGCCCCGAGCGC +
Preference number: 5 (lower is better)
Translates to: ADAGRGGERQRGEAD*HDEASERHLRGPER
Trigger: GCGCTCGGGGCCACGCAGATGGCGCTCGGATGCCTCATCGTGGCAGTCAGCTTCGCCGCGCTGGCGCTCACCACCTCGGCCCGCGTCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.5
ENST00000622117.2
CDS GCA 90 bp AGCGCGGCGAAGCTGACTGCCACGATGAGGCATCCGAGCGCCATCTaGGTGGCCCCGAGCGCCAGCACGATGCGGGAGCGGCCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: SAAKLTATMRHPSAI*VAPSASTMRERPGH
Trigger: GTGCCCGGGCCGCTCCCGCATCGTGCTGGCGCTCGGGGCCACGCAGATGGCGCTCGGATGCCTCATCGTGGCAGTCAGCTTCGCCGCGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.5
ENST00000622117.2
CDS-3UTR CAA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTAGGGTGGCTGGTGGTCTaGGCCTCGCTGGAATTGCAG +
Preference number: 5 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALGWLVV*ASLELQ
Trigger: CTGCAATTCCAGCGAGGCCAAGACCACCAGCCACCC...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS TCA 90 bp TGTTGGCCGTTGGTCAGTTTTCCAGGTATCTGGGTCCCCCGCTGGTaGAAGCTGGGCCCGACAGGCAGCCGTGGCAGAGCGAGACATGGA +
Preference number: 5 (lower is better)
Translates to: CWPLVSFPGIWVPRW*KLGPTGSRGRARHG
Trigger: TCCATGTCTCGCTCTGCCACGGCTGCCTGTCGGGCCCAGCTTTCACCAGCGGGGGACCCAGATACCTGGAAAACTGACCAACGGCCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS-3UTR CAA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGAGCGTCTCCCCGAGGTaGCTGCAGCCGGACGACTGG +
Preference number: 5 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPSVSPR*LQPDDW
Trigger: CCAGTCGTCCGGCTGCAGCAACCTCGGGGAGACGCT...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp CCTTGGCCTCTAGGCTGTTTTGTTCACCGCAGGGCCCACCCAACGCAGCTCAGGCGGACACCAGGAGGCTaGTGCTGTCAGCTGGTACTG +
Preference number: 5 (lower is better)
Translates to: PWPLGCFVHRRAHPTQLRRTPGG*CCQLVL
Trigger: CAGTACCAGCTGACAGCACAAGCCTCCTGGTGTCCG...CCTGAGCTGCGTTGGGTGGGCCCTGCGGTGAACAAAACAGCCTAGAGGCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTACTGTGGCGCCAGGCGTaGGTGTCCACGGTCAGAAAT +
Preference number: 5 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALLWRQA*VSTVRN
Trigger: ATTTCTGACCGTGGACACCAACGCCTGGCGCCACAG...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp GTCCTTGCGGATGATGCTCCCCCTTCTGCGATCTTGCTTGCCATAGAGTTGGGGCAGCCCCATTGGCCATaGGGACCGGGCCCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: VLADDAPPSAILLAIELGQPHWP*GPGPAA
Trigger: TGCAGCAGGGCCCGGTCCCAATGGCCAATGGGGCTG...CCCCAACTCTATGGCAAGCAAGATCGCAGAAGGGGGAGCATCATCCGCAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS TCA 90 bp GGGATGAACTCGTCGAAATCCAGGGTCTGGTGGAGAACGGTGCCGTaGGGAGTCACGCAGGTGGGGTTGGCAGGATGTGACCTCTGCGGA +
Preference number: 5 (lower is better)
Translates to: GMNSSKSRVWWRTVP*GVTQVGLAGCDLCG
Trigger: TCCGCAGAGGTCACATCCTGCCAACCCCACCTGCGTGACTCCTCACGGCACCGTTCTCCACCAGACCCTGGATTTCGACGAGTTCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS GCA 90 bp AGGCGCTCCTCGTTGGTGACAGCCAAGCGCATGGCACCCACCATGTaGTGTGCCTCGGTGGGGAGGGCACAGTGTGAGTGTTCCAAAAAC +
Preference number: 5 (lower is better)
Translates to: RRSSLVTAKRMAPTM*CASVGRAQCECSKN
Trigger: GTTTTTGGAACACTCACACTGTGCCCTCCCCACCGAGGCACAGCACATGGTGGGTGCCATGCGCTTGGCTGTCACCAACGAGGAGCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS-3UTR CAA 90 bp GTCAGGCATGATGGCTTCTGCCAAGAACATCTGTGGCGCCAGGCGTTGGTGTCCGTCAGCCTCACAGCGTaGCAGTTCTCCTGCAGCGGG +
Preference number: 5 (lower is better)
Translates to: VRHDGFCQEHLWRQALVSVSLTA*QFSCSG
Trigger: CCCGCTGCAGGAGAACTGCAACGCTGTGAGGCTGAC...GGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp ACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGGGGGCAGCAGCCCCATaGGCCATTGGGACCGGGCCC +
Preference number: 5 (lower is better)
Translates to: TKELGIGTCCYGSHNCSRGAAAP*AIGTGP
Trigger: GGGCCCGGTCCCAATGGCCAATGGGGCTGCTGCCCC...CCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGCGGGGCCCAGCTGAGTaGGAGAAGGAGCGTGTCACC +
Preference number: 5 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPRGPAE*EKERVT
Trigger: GGTGACACGCTCCTTCTCCAACTCAGCTGGGCCCCG...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACAGTCACGCAGGTGGGGTaGGCAGGATGTGACCTCTGC +
Preference number: 5 (lower is better)
Translates to: GIRELGELKDKPHKAEGTVTQVG*AGCDLC
Trigger: GCAGAGGTCACATCCTGCCAACCCCACCTGCGTGAC...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp TGGCTGGTGGTCTTGGCCTCGCTGGAATTGCAGCCATGTCTGAGGACTGCAGCTCCTGTGGACAGAAAGTaGGGCCCAGGCTGCCATCTG +
Preference number: 5 (lower is better)
Translates to: WLVVLASLELQPCLRTAAPVDRK*GPGCHL
Trigger: CAGATGGCAGCCTGGGCCCAACTTTCTGTCCACAGG...AGCTGCAGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAAGACCACCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp CAGCTGAAGGAGTCCCACACCGCAGCCCCCAGGGCAGGGATAAAGGACTGGAGGTCCATAAGCAGCACGTaGGGTGTCTGCTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: QLKESHTAAPRAGIKDWRSISST*GVCFPS
Trigger: AGAAGGGAAGCAGACACCCAACGTGCTGCTTATGGA...CCTCCAGTCCTTTATCCCTGCCCTGGGGGCTGCGGTGTGGGACTCCTTCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp CCTTGGCCTCTAGGCTGTTTTGTTCACCGCAGGGCCCACCCAACGCAGCTCAGGCCAAAGCAGCCACAGTaGGCCCATTTCAGATCCCAG +
Preference number: 5 (lower is better)
Translates to: PWPLGCFVHRRAHPTQLRPKQPQ*AHFRSQ
Trigger: CTGGGATCTGAAATGGGCCAACTGTGGCTGCTTTGG...CCTGAGCTGCGTTGGGTGGGCCCTGCGGTGAACAAAACAGCCTAGAGGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp AAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGAGAAACCGGCCTCTCTCCAGGTGCCAACCCCCTTaGGGTCTCAGGGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: KGPALSGGATSQRNRPLSRCQPP*GLRGGQ
Trigger: CTGCCCTCCCCTGAGACCCAAAGGGGGTTGGCACCT...GGAGAGAGGCCGGTTTCTCTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGAGCCAGCACTGGTGTTaGGGTCCCCGGAGCTGGACT +
Preference number: 5 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGSQHWC*GPRSWT
Trigger: AGTCCAGCTCCGGGGACCCAAACACCAGTGCTGGCT...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp GTGAGCTCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACGAGCGTGGCCGCTCTTaGGAGGTCGCTGGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: VSSDTKELGIGTCCYGSHERGRS*EVAGKG
Trigger: GCCCTTCCCAGCGACCTCCAAAGAGCGGCCACGCTC...GTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGAGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp TGGGTCAAGTTGCCAGCACATTCCCTAGTCTACCAGCACCTCTCTCTTCTGGGGTCGAGGCGCTCCTCGTaGGTGACAGCCAAGCGCATG +
Preference number: 5 (lower is better)
Translates to: WVKLPAHSLVYQHLSLLGSRRSS*VTAKRM
Trigger: CATGCGCTTGGCTGTCACCAACGAGGAGCGCCTCGA...CCCCAGAAGAGAGAGGTGCTGGTAGACTAGGGAATGTGCTGGCAACTTGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTATTGCTTGCCATAGAGTaGGGGTCCATGTTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALLLAIE*GSMFSP
Trigger: TGGGGAGAACATGGACCCCAACTCTATGGCAAGCAA...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS GCA 90 bp GACCTCTGCGGAAGGAACATCTGCAGGACATCGGAGGAGACCATCTaGATACAGCACATGGCTGTGGCCAGCGCACACACGATAGTGGAC +
Preference number: 5 (lower is better)
Translates to: DLCGRNICRTSEETI*IQHMAVASAHTIVD
Trigger: GTCCACTATCGTGTGTGCGCTGGCCACAGCCATGTGCTGTATGCAGATGGTCTCCTCCGATGTCCTGCAGATGTTCCTTCCGCAGAGGTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS-3UTR CAA 90 bp AGCCCACCCAAGGGCTCAGCCCAGGGACAATGCTGTGTGAACCCCCAAGCCCTAGCACTGCACATTTGTTaGCACAATAGCCCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: SPPKGSAQGQCCVNPQALALHIC*HNSPVD
Trigger: GTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGC...TAGGGCTTGGGGGTTCACACAGCATTGTCCCTGGGCTGAGCCCTTGGGTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp AAGGTCAGCTCTGGGTCAAAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGCTCTGGGCACCTGGATaGGAACCTCACCCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: KVSSGSKGPALSGGATSQLWAPG*EPHPLP
Trigger: GGGAAGGGGGTGAGGTTCCAATCCAGGTGCCCAGAG...CTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTTTGACCCAGAGCTGACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp TTCGAAGGGGCAGAAGGTTCCAGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGCCCCCTTCTGCGATCTaGCTTGCCATAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: FEGAEGSSPAASSWVQFPPPSAI*LAIELG
Trigger: CCCCAACTCTATGGCAAGCAAGATCGCAGAAGGGGG...CGGAAACTGTACCCAACTTGATGCCGCTGGGCTGGAACCTTCTGCCCCTTCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp CCTTGGCCTCTAGGCTGTTTTGTTCACCGCAGGGCCCACCCAACGCAGCTCAGGATACAGCCTTTCCAGTaGTACAGACAGGTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: PWPLGCFVHRRAHPTQLRIQPFQ*YRQVSG
Trigger: ACCAGAGACCTGTCTGTACAACTGGAAAGGCTGTAT...CCTGAGCTGCGTTGGGTGGGCCCTGCGGTGAACAAAACAGCCTAGAGGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp GTCAGGCATGATGGCTTCTGCCAAGAACATCTGTGGCGCCAGGCGTTGGTGTCCCTGCAAAAGTGCAGGTaGTCATCAAAAGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: VRHDGFCQEHLWRQALVSLQKCR*SSKGLA
Trigger: AGCCAGGCCTTTTGATGACAACCTGCACTTTTGCAG...GGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCATCATGCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp TCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGGACAGGATGGGAGCCTTTGGCCTCGCTGGAATaGCAGCCATGTCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: SALVVTDHTTAPGTGWEPLASLE*QPCLRT
Trigger: AGTCCTCAGACATGGCTGCAATTCCAGCGAGGCCAA...AGGCTCCCATCCTGTCCCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp AAGGTCAGCTCTGGGTCAAAGGGACCTGCTTTATCAGGAGGGGCTACTTCTCAGGGAGACCTGAAGTCCTaGCGGATGATGCTCCCCCTT +
Preference number: 5 (lower is better)
Translates to: KVSSGSKGPALSGGATSQGDLKS*RMMLPL
Trigger: AAGGGGGAGCATCATCCGCAAGGACTTCAGGTCTCC...CTGAGAAGTAGCCCCTCCTGATAAAGCAGGTCCCTTTGACCCAGAGCTGACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS TCA 90 bp GACCTCACCGTTAACAGGCATTCGACCCCCGAGGGTACGCGTGAGTaGCACAGTTCAGAACACAGGAAAATGGCTCAGTTCAAAGGAGCC +
Preference number: 5 (lower is better)
Translates to: DLTVNRHSTPEGTRE*HSSEHRKMAQFKGA
Trigger: GGCTCCTTTGAACTGAGCCATTTTCCTGTGTTCTGAACTGTGTCACTCACGCGTACCCTCGGGGGTCGAATGCCTGTTAACGGTGAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560021.1
ENST00000631577.1
CDS GCA 90 bp AGGTGTGAGTCTGCGCTCCAGGCTCCAGAGATGCTTCTGCAAGCATaGTGCCCAAATCCACGTCTTTTCTGCTACTGGGAGCTCTCTCAT +
Preference number: 5 (lower is better)
Translates to: RCESALQAPEMLLQA*CPNPRLFCYWELSH
Trigger: ATGAGAGAGCTCCCAGTAGCAGAAAAGACGTGGATTTGGGCAGCATGCTTGCAGAAGCATCTCTGGAGCCTGGAGCGCAGACTCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560082.1
ENST00000631618.1
CDS-3UTR CAA 90 bp ACAGGAAATAGGCCAGAGCGTGATGAACGCCTAATGATAGAGCCATCGAGCCACGGAAGGGCTCTGGTGTaGGCCGTTGGTCAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: TGNRPERDERLMIEPSSHGRALV*AVGQFS
Trigger: GGAAAACTGACCAACGGCCAACACCAGAGCCCTTCC...GTGGCTCGATGGCTCTATCATTAGGCGTTCATCACGCTCTGGCCTATTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp GTGAGCTCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACGTTCCACGGCCATTGTaGGGAGCAGCTGCCACTGAT +
Preference number: 5 (lower is better)
Translates to: VSSDTKELGIGTCCYGSHVPRPL*GAAATD
Trigger: ATCAGTGGCAGCTGCTCCCAACAATGGCCGTGGAAC...GTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp TTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGCTCTCTGGGGAGACCTaGGCCTCTAGGCTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: FHHCTKFSWMALFHGHCWLSGET*ASRLFC
Trigger: ACAAAACAGCCTAGAGGCCAAGGTCTCCCCAGAGAG...CCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS GCA 90 bp TGTGAGTCTGCGCTCCAGGCTCCAGAGATGCTTCTGCAAGCATGCTaGCCAAATCCACGTCTTTTCTGCTACTGGGAGCTCTCTCATCTT +
Preference number: 5 (lower is better)
Translates to: CESALQAPEMLLQAC*PNPRLFCYWELSHL
Trigger: AAGATGAGAGAGCTCCCAGTAGCAGAAAAGACGTGGATTTGGGCAGCATGCTTGCAGAAGCATCTCTGGAGCCTGGAGCGCAGACTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560082.1
ENST00000631618.1
CDS-3UTR CAA 90 bp GTGAGCTCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACATAGTGGACAGGACGTaGAGGGCACACACGCTGAAG +
Preference number: 5 (lower is better)
Translates to: VSSDTKELGIGTCCYGSHIVDRT*RAHTLK
Trigger: CTTCAGCGTGTGTGCCCTCAACGTCCTGTCCACTAT...GTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp ACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGAGCAGGCCGGGGCTATaGATGGCCACGTCATACAAA +
Preference number: 5 (lower is better)
Translates to: TKELGIGTCCYGSHNCSRSRPGL*MATSYK
Trigger: TTTGTATGACGTGGCCATCAATAGCCCCGGCCTGCT...CCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp CAGAGGCCCGCACTGCACATTTGTTTGCACAATAGCCCTGTGGACAGAAAGTTGGGCCTGAAGGCCTCTTaGTCAGGCATGATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: QRPALHICLHNSPVDRKLGLKAS*SGMMAS
Trigger: AGAAGCCATCATGCCTGACAAAGAGGCCTTCAGGCC...CAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp AGCCCAGCGGCATCAAGTTGGGTACAGTTTCCGTATCCACAAAACAGAGCTGCCTGGGAGACTCCTGCTTaGGAAGGCCCTGATTTTGGA +
Preference number: 5 (lower is better)
Translates to: SPAASSWVQFPYPQNRAAWETPA*EGPDFG
Trigger: TCCAAAATCAGGGCCTTCCAAAGCAGGAGTCTCCCA...GGCAGCTCTGTTTTGTGGATACGGAAACTGTACCCAACTTGATGCCGCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp ACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCTCCAGGCCCAGCGGCATCAAGTaGGGTACAGTTTCCGTATCC +
Preference number: 5 (lower is better)
Translates to: TKELGIGTCCYGSHNCSRPSGIK*GTVSVS
Trigger: GGATACGGAAACTGTACCCAACTTGATGCCGCTGGG...CCTGGAGCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp TTCCATCACTGCACAAAGTTCTCGTGGATGGCGCTGTTCCACGGCCATTGTTGGGCTGGGAATCGGCACTaGTTGTTACGGATCACACAA +
Preference number: 5 (lower is better)
Translates to: FHHCTKFSWMALFHGHCWAGNRH*LLRITQ
Trigger: TTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGC...CCAACAATGGCCGTGGAACAGCGCCATCCACGAGAACTTTGTGCAGTGATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCCTCTGGTGTTGGCCGTaGGTCAGTTTTCCAGGTATC +
Preference number: 5 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCLWCWP*VSFPGI
Trigger: GATACCTGGAAAACTGACCAACGGCCAACACCAGAG...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp GGCATTAGGGAATTGGGGGAGCTCAAGGACAAGCCCCACAAAGCCGAGGGAACATTGCTGTATTCACATTaGTGCAACACTGCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: GIRELGELKDKPHKAEGTLLYSH*CNTAQF
Trigger: GAACTGAGCAGTGTTGCACAAATGTGAATACAGCAA...TGTTCCCTCGGCTTTGTGGGGCTTGTCCTTGAGCTCCCCCAATTCCCTAATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp CAGAGGCCCGCACTGCACATTTGTTTGCACAATAGCCCTGTGGACAGAAAGTTGGGGAATCGGCACTTGTaGTTACGGATCACACAACTG +
Preference number: 5 (lower is better)
Translates to: QRPALHICLHNSPVDRKLGNRHL*LRITQL
Trigger: CAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCC...CAACTTTCTGTCCACAGGGCTATTGTGCAAACAAATGTGCAGTGCGGGCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp TCATCTTTCCGAATTACTGGGCTAGGCAGGAAATGCAATCCCCAAAGAGACACTGCAAAGGGACTTGCCTaGAGGGAATTCAAAAGCCCC +
Preference number: 5 (lower is better)
Translates to: SSFRITGLGRKCNPQRDTAKGLA*REFKSP
Trigger: GGGGCTTTTGAATTCCCTCAAGGCAAGTCCCTTTGC...AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS TCA 90 bp GAGATTTGTTCACCACTGGCTTCTCTGATTTGGTGGTTAAGAGTCTaGAAATCGGTCATCCTTAAGGTCTGGAGCTCAGAAAGCACGCCG +
Preference number: 5 (lower is better)
Translates to: EICSPLASLIWWLRV*KSVILKVWSSESTP
Trigger: CGGCGTGCTTTCTGAGCTCCAGACCTTAAGGATGACCGATTTTCAGACTCTTAACCACCAAATCAGAGAAGCCAGTGGTGAACAAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560050.1
ENST00000632505.1
CDS-3UTR CAA 90 bp TCATCTTTCCGAATTACTGGGCTAGGCAGGAAATGCAATCCCCAAAGAGACACTCGTAAGTGTCGCCTGTaGCTGTATTCACATTTGTGC +
Preference number: 5 (lower is better)
Translates to: SSFRITGLGRKCNPQRDTRKCRL*LYSHLC
Trigger: GCACAAATGTGAATACAGCAACAGGCGACACTTACG...AGTGTCTCTTTGGGGATTGCATTTCCTGCCTAGCCCAGTAATTCGGAAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS-3UTR CAA 90 bp TCAGACACAAAGGAGCTGGGAATCGGCACTTGTTGTTACGGATCACACAACTGCCAGGTCTCTGGTGGCTaGAAAACAATTTCCTATAAA +
Preference number: 5 (lower is better)
Translates to: SDTKELGIGTCCYGSHNCQVSGG*KTISYK
Trigger: TTTATAGGAAATTGTTTTCAAGCCACCAGAGACCTG...GCAGTTGTGTGATCCGTAACAACAAGTGCCGATTCCCAGCTCCTTTGTGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622117.2
CDS GCA 72 bp CGAGCGCCATCTGCGTGGCCCCGAGCGCCAGCACGATaGGGGAGCGGCCCGGGCACTCGCGCAGGCGGGACA +
Preference number: 6 (lower is better)
Translates to: RAPSAWPRAPAR*GSGPGTRAGGT
Trigger: TGTCCCGCCTGCGCGAGTGCCCGGGCCGCTCCCGCATCGTGCTGGCGCTCGGGGCCACGCAGATGGCGCTCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261275.5
ENST00000622117.2
CDS GCA 72 bp CTGCCCCCTGCCCCAGGACGCCGGATGCGGGTCGCCTaGCCAGTCCCGTCGCCCACAAACCACGCCGTTCTG +
Preference number: 6 (lower is better)
Translates to: LPPAPGRRMRVA*PVPSPTNHAVL
Trigger: CAGAACGGCGTGGTTTGTGGGCGACGGGACTGGGCAGGCGACCCGCATCCGGCGTCCTGGGGCAGGGGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560050.1
ENST00000632505.1
CDS GCA 72 bp TCTCCTCACAGAGGGTCCGAGGCAAGTTGCGCCGGGTaGAGGGACGGCCTCCCAGCCGGCTGCCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: SPHRGSEASCAG*RDGLPAGCQGC
Trigger: GCAGCCCTGGCAGCCGGCTGGGAGGCCGTCCCTGCACCCGGCGCAACTTGCCTCGGACCCTCTGTGAGGAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261275.5
CDS CCA 72 bp GGAGGGTGCTGGGGCGCCCACAGGGCCATCGGGGGATaGGCTGGAACCTGGCGTAGCAGTGCCCTCGGACAC +
Preference number: 6 (lower is better)
Translates to: GGCWGAHRAIGG*AGTWRSSALGH
Trigger: GTGTCCGAGGGCACTGCTACGCCAGGTTCCAGCCCATCCCCCGATGGCCCTGTGGGCGCCCCAGCACCCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS GCA 72 bp GGCCGAGGTGGTGAGCGCCAGCGCGGCGAAGCTGACTaGCACGATGAGGCATCCGAGCGCCATCTGCGTGGC +
Preference number: 6 (lower is better)
Translates to: GRGGERQRGEAD*HDEASERHLRG
Trigger: GCCACGCAGATGGCGCTCGGATGCCTCATCGTGGCAGTCAGCTTCGCCGCGCTGGCGCTCACCACCTCGGCC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.5
ENST00000622117.2
CDS GCA 72 bp AAGCTGACTGCCACGATGAGGCATCCGAGCGCCATCTaGGTGGCCCCGAGCGCCAGCACGATGCGGGAGCGG +
Preference number: 6 (lower is better)
Translates to: KLTATMRHPSAI*VAPSASTMRER
Trigger: CCGCTCCCGCATCGTGCTGGCGCTCGGGGCCACGCAGATGGCGCTCGGATGCCTCATCGTGGCAGTCAGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261275.5
ENST00000622117.2
CDS CCA 72 bp CCCCCGCTGGTGAAAGCTGGGCCCGACAGGCAGCCGTaGCAGAGCGAGACATGGAAGCGCTCCCAGGCACAG +
Preference number: 6 (lower is better)
Translates to: PPLVKAGPDRQP*QSETWKRSQAQ
Trigger: CTGTGCCTGGGAGCGCTTCCATGTCTCGCTCTGCCACGGCTGCCTGTCGGGCCCAGCTTTCACCAGCGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS CCA 72 bp CCTGCCCAGTCCCGTCGCCCACAAACCACGCCGTTCTaGGCGGACGCGGGAAACCAGAAGTCCCCGAAGCCA +
Preference number: 6 (lower is better)
Translates to: PAQSRRPQTTPF*ADAGNQKSPKP
Trigger: TGGCTTCGGGGACTTCTGGTTTCCCGCGTCCGCCCAGAACGGCGTGGTTTGTGGGCGACGGGACTGGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560050.1
ENST00000632505.1
CDS CAA 72 bp GCGCCGAAGACGGCCTCCTCCTCGAGGCGCTCCTCGTaGGTGACAGCCAAGCGCATGGCACCCACCATGTGC +
Preference number: 6 (lower is better)
Translates to: APKTASSSRRSS*VTAKRMAPTMC
Trigger: GCACATGGTGGGTGCCATGCGCTTGGCTGTCACCAACGAGGAGCGCCTCGAGGAGGAGGCCGTCTTCGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS GCA 72 bp CCTGCAGCGGGTTCAGCTTCAGCGTCTCCCCGAGGTTaGTGCAGCCGGACGACTGGTGCTGCAGCTCACAGC +
Preference number: 6 (lower is better)
Translates to: PAAGSASASPRG*CSRTTGAAAHS
Trigger: GCTGTGAGCTGCAGCACCAGTCGTCCGGCTGCAGCAACCTCGGGGAGACGCTGAAGCTGAACCCGCTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000560082.1
ENST00000622117.2
ENST00000631577.1
ENST00000631618.1
CDS TCA 72 bp CGAAGACGGCCTCCTCCTCGAGGCGCTCCTCGTTGGTaGCAGCCAAGCGCATGGCACCCACCATGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: RRRPPPRGAPRW*QPSAWHPPCAV
Trigger: CACAGCACATGGTGGGTGCCATGCGCTTGGCTGTCACCAACGAGGAGCGCCTCGAGGAGGAGGCCGTCTTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS GCA 72 bp GCAGCGGGTTCAGCTTCAGCGTCTCCCCGAGGTTGCTaGAGCCGGACGACTGGTGCTGCAGCTCACAGCAGA +
Preference number: 6 (lower is better)
Translates to: AAGSASASPRGC*SRTTGAAAHSR
Trigger: TCTGCTGTGAGCTGCAGCACCAGTCGTCCGGCTGCAGCAACCTCGGGGAGACGCTGAAGCTGAACCCGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000560082.1
ENST00000622117.2
ENST00000631577.1
ENST00000631618.1
CDS CAA 72 bp TCCTGCAGCGGGTTCAGCTTCAGCGTCTCCCCGAGGTaGCTGCAGCCGGACGACTGGTGCTGCAGCTCACAG +
Preference number: 6 (lower is better)
Translates to: SCSGFSFSVSPR*LQPDDWCCSSQ
Trigger: CTGTGAGCTGCAGCACCAGTCGTCCGGCTGCAGCAACCTCGGGGAGACGCTGAAGCTGAACCCGCTGCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000560082.1
ENST00000622117.2
ENST00000631577.1
ENST00000631618.1
CDS TCA 72 bp TTGGTCAGTTTTCCAGGTATCTGGGTCCCCCGCTGGTaGAAGCTGGGCCCGACAGGCAGCCGTGGCAGAGCG +
Preference number: 6 (lower is better)
Translates to: LVSFPGIWVPRW*KLGPTGSRGRA
Trigger: CGCTCTGCCACGGCTGCCTGTCGGGCCCAGCTTTCACCAGCGGGGGACCCAGATACCTGGAAAACTGACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS CCA 72 bp CCAGGCACAGCCTCAGACAGTCCCGCTTCCAGGTCCTaGCTACACGACGGCCTGTGTGAAGAGGCATCGCCT +
Preference number: 6 (lower is better)
Translates to: PGTASDSPASRS*LHDGLCEEASP
Trigger: AGGCGATGCCTCTTCACACAGGCCGTCGTGTAGCCAGGACCTGGAAGCGGGACTGTCTGAGGCTGTGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS CCA 72 bp GTTTTCCAGGTATCTGGGTCCCCCGCTGGTGAAAGCTaGGCCCGACAGGCAGCCGTGGCAGAGCGAGACATG +
Preference number: 6 (lower is better)
Translates to: VFQVSGSPAGES*ARQAAVAERDM
Trigger: CATGTCTCGCTCTGCCACGGCTGCCTGTCGGGCCCAGCTTTCACCAGCGGGGGACCCAGATACCTGGAAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS CAA 90 bp TTGCAGTTCTCCTGCAGCGGGTTCAGCTTCAGCGTCTCCCCGAGGTaGCTGCAGCCGGACGACTGGTGCTGCAGCTCACAGCAGACACAC +
Preference number: 6 (lower is better)
Translates to: LQFSCSGFSFSVSPR*LQPDDWCCSSQQTH
Trigger: GTGTGTCTGCTGTGAGCTGCAGCACCAGTCGTCCGGCTGCAGCAACCTCGGGGAGACGCTGAAGCTGAACCCGCTGCAGGAGAACTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000560082.1
ENST00000622117.2
ENST00000631577.1
ENST00000631618.1
CDS CAA 90 bp AAGAGCGTGGCCGCTCTTTGGAGGTCGCTGGGAAGGGCTCTGGTGTaGGCCGTTGGTCAGTTTTCCAGGTATCTGGGTCCCCCGCTGGTG +
Preference number: 6 (lower is better)
Translates to: KSVAALWRSLGRALV*AVGQFSRYLGPPLV
Trigger: CACCAGCGGGGGACCCAGATACCTGGAAAACTGACCAACGGCCAACACCAGAGCCCTTCCCAGCGACCTCCAAAGAGCGGCCACGCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS TCA 72 bp CAAGGGAGAGAGGCCTCTTCCAGGAGACGACACCTATaGGTCCCGACAGCAGCACCGAGAAGCCTGCCCAGA +
Preference number: 6 (lower is better)
Translates to: QGREASSRRRHL*VPTAAPRSLPR
Trigger: TCTGGGCAGGCTTCTCGGTGCTGCTGTCGGGACTCATAGGTGTCGTCTCCTGGAAGAGGCCTCTCTCCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.5
ENST00000622117.2
CDS TCA 72 bp TCGTCGAAATCCAGGGTCTGGTGGAGAACGGTGCCGTaGGGAGTCACGCAGGTGGGGTTGGCAGGATGTGAC +
Preference number: 6 (lower is better)
Translates to: SSKSRVWWRTVP*GVTQVGLAGCD
Trigger: GTCACATCCTGCCAACCCCACCTGCGTGACTCCTCACGGCACCGTTCTCCACCAGACCCTGGATTTCGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS CCA 72 bp GGAGAACGGTGCCGTGAGGAGTCACGCAGGTGGGGTTaGCAGGATGTGACCTCTGCGGAAGGAACATCTGCA +
Preference number: 6 (lower is better)
Translates to: GERCREESRRWG*QDVTSAEGTSA
Trigger: TGCAGATGTTCCTTCCGCAGAGGTCACATCCTGCCAACCCCACCTGCGTGACTCCTCACGGCACCGTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS CCA 72 bp TCTGGTGGAGAACGGTGCCGTGAGGAGTCACGCAGGTaGGGTTGGCAGGATGTGACCTCTGCGGAAGGAACA +
Preference number: 6 (lower is better)
Translates to: SGGERCREESRR*GWQDVTSAEGT
Trigger: TGTTCCTTCCGCAGAGGTCACATCCTGCCAACCCCACCTGCGTGACTCCTCACGGCACCGTTCTCCACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS CCA 72 bp TTGGAGGTCGCTGGGAAGGGCTCTGGTGTTGGCCGTTaGTCAGTTTTCCAGGTATCTGGGTCCCCCGCTGGT +
Preference number: 6 (lower is better)
Translates to: LEVAGKGSGVGR*SVFQVSGSPAG
Trigger: ACCAGCGGGGGACCCAGATACCTGGAAAACTGACCAACGGCCAACACCAGAGCCCTTCCCAGCGACCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS CCA 72 bp CCGCTCTTTGGAGGTCGCTGGGAAGGGCTCTGGTGTTaGCCGTTGGTCAGTTTTCCAGGTATCTGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: PLFGGRWEGLWC*PLVSFPGIWVP
Trigger: GGGGACCCAGATACCTGGAAAACTGACCAACGGCCAACACCAGAGCCCTTCCCAGCGACCTCCAAAGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS CCA 72 bp GCGTGGCCGCTCTTTGGAGGTCGCTGGGAAGGGCTCTaGTGTTGGCCGTTGGTCAGTTTTCCAGGTATCTGG +
Preference number: 6 (lower is better)
Translates to: AWPLFGGRWEGL*CWPLVSFPGIW
Trigger: CCAGATACCTGGAAAACTGACCAACGGCCAACACCAGAGCCCTTCCCAGCGACCTCCAAAGAGCGGCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS CCA 72 bp AGGCCTTGCTGTCCACTAAAGAGCGTGGCCGCTCTTTaGAGGTCGCTGGGAAGGGCTCTGGTGTTGGCCGTT +
Preference number: 6 (lower is better)
Translates to: RPCCPLKSVAAL*RSLGRALVLAV
Trigger: AACGGCCAACACCAGAGCCCTTCCCAGCGACCTCCAAAGAGCGGCCACGCTCTTTAGTGGACAGCAAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS CAA 72 bp TTTGGAGGTCGCTGGGAAGGGCTCTGGTGTTGGCCGTaGGTCAGTTTTCCAGGTATCTGGGTCCCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: FGGRWEGLWCWP*VSFPGIWVPRW
Trigger: CCAGCGGGGGACCCAGATACCTGGAAAACTGACCAACGGCCAACACCAGAGCCCTTCCCAGCGACCTCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS CAA 72 bp GCCGCTCTTTGGAGGTCGCTGGGAAGGGCTCTGGTGTaGGCCGTTGGTCAGTTTTCCAGGTATCTGGGTCCC +
Preference number: 6 (lower is better)
Translates to: AALWRSLGRALV*AVGQFSRYLGP
Trigger: GGGACCCAGATACCTGGAAAACTGACCAACGGCCAACACCAGAGCCCTTCCCAGCGACCTCCAAAGAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS TCA 72 bp GGGGGAGCTCAGCAGGATAGAGCAGGCCGGGGCTATTaGTGGCCACGTCATACAAAGTGCCGAATGGAGACG +
Preference number: 6 (lower is better)
Translates to: GGAQQDRAGRGY*WPRHTKCRMET
Trigger: CGTCTCCATTCGGCACTTTGTATGACGTGGCCATCAATAGCCCCGGCCTGCTCTATCCTGCTGAGCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS TCA 72 bp TCCCGCTTCCAGGTCCTGGCTACACGACGGCCTGTGTaGAGAGGCATCGCCTGCCATGCTAGATGTGCACAA +
Preference number: 6 (lower is better)
Translates to: SRFQVLATRRPV*RGIACHARCAQ
Trigger: TTGTGCACATCTAGCATGGCAGGCGATGCCTCTTCACACAGGCCGTCGTGTAGCCAGGACCTGGAAGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS GCA 72 bp TCCTTCAAGGTCAGCCTCACAGCGTTGCAGTTCTCCTaGAGCGGGTTCAGCTTCAGCGTCTCCCCGAGGTTG +
Preference number: 6 (lower is better)
Translates to: SFKVSLTALQFS*SGFSFSVSPRL
Trigger: CAACCTCGGGGAGACGCTGAAGCTGAACCCGCTGCAGGAGAACTGCAACGCTGTGAGGCTGACCTTGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
ENST00000631618.1
CDS GCA 72 bp GGAAGGAACATCTGCAGGACATCGGAGGAGACCATCTaGATACAGCACATGGCTGTGGCCAGCGCACACACG +
Preference number: 6 (lower is better)
Translates to: GRNICRTSEETI*IQHMAVASAHT
Trigger: CGTGTGTGCGCTGGCCACAGCCATGTGCTGTATGCAGATGGTCTCCTCCGATGTCCTGCAGATGTTCCTTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS GCA 72 bp GCGCTCCAGGCTCCAGAGATGCTTCTGCAAGCATGCTaGCCAAATCCACGTCTTTTCTGCTACTGGGAGCTC +
Preference number: 6 (lower is better)
Translates to: ALQAPEMLLQAC*PNPRLFCYWEL
Trigger: GAGCTCCCAGTAGCAGAAAAGACGTGGATTTGGGCAGCATGCTTGCAGAAGCATCTCTGGAGCCTGGAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560082.1
ENST00000631618.1
CDS CAA 72 bp CTGAAGAGGAGATCCTTCAAGGTCAGCCTCACAGCGTaGCAGTTCTCCTGCAGCGGGTTCAGCTTCAGCGTC +
Preference number: 6 (lower is better)
Translates to: LKRRSFKVSLTA*QFSCSGFSFSV
Trigger: GACGCTGAAGCTGAACCCGCTGCAGGAGAACTGCAACGCTGTGAGGCTGACCTTGAAGGATCTCCTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261275.5
ENST00000560021.1
ENST00000622117.2
ENST00000631577.1
CDS GCA 72 bp TCTGCGCTCCAGGCTCCAGAGATGCTTCTGCAAGCATaGTGCCCAAATCCACGTCTTTTCTGCTACTGGGAG +
Preference number: 6 (lower is better)
Translates to: SALQAPEMLLQA*CPNPRLFCYWE
Trigger: CTCCCAGTAGCAGAAAAGACGTGGATTTGGGCAGCATGCTTGCAGAAGCATCTCTGGAGCCTGGAGCGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560082.1
ENST00000631618.1
CDS GCA 72 bp AGGGTAGGTGTGAGTCTGCGCTCCAGGCTCCAGAGATaGTTCTGCAAGCATGCTGCCCAAATCCACGTCTTT +
Preference number: 6 (lower is better)
Translates to: RVGVSLRSRLQR*FCKHAAQIHVF
Trigger: AAAGACGTGGATTTGGGCAGCATGCTTGCAGAAGCATCTCTGGAGCCTGGAGCGCAGACTCACACCTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560082.1
ENST00000631618.1
CDS CCA 72 bp ATGGCTTCTGCCAAGAACATCTGTGGCGCCAGGCGTTaGTGTCCACGGTCAGAAATGTGGCTCCTTCATACC +
Preference number: 6 (lower is better)
Translates to: MASAKNICGARR*CPRSEMWLLHT
Trigger: GGTATGAAGGAGCCACATTTCTGACCGTGGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.5
ENST00000622117.2
CDS CAA 72 bp GATGGCTTCTGCCAAGAACATCTGTGGCGCCAGGCGTaGGTGTCCACGGTCAGAAATGTGGCTCCTTCATAC +
Preference number: 6 (lower is better)
Translates to: DGFCQEHLWRQA*VSTVRNVAPSY
Trigger: GTATGAAGGAGCCACATTTCTGACCGTGGACACCAACGCCTGGCGCCACAGATGTTCTTGGCAGAAGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261275.5
ENST00000622117.2
CDS TCA 72 bp CAAGGGAGAGAGGCCTCTTCCAGGAGACGACACCTATaGGTCCCGACAGCAGCACTGAGTTTACAAGCCTAT +
Preference number: 6 (lower is better)
Translates to: QGREASSRRRHL*VPTAALSLQAY
Trigger: ATAGGCTTGTAAACTCAGTGCTGCTGTCGGGACTCATAGGTGTCGTCTCCTGGAAGAGGCCTCTCTCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560050.1
ENST00000632505.1
CDS TCA 72 bp GTTAACAGGCATTCGACCCCCGAGGGTACGCGTGAGTaGCACAGTTCAGAACACAGGAAAATGGCTCAGTTC +
Preference number: 6 (lower is better)
Translates to: VNRHSTPEGTRE*HSSEHRKMAQF
Trigger: GAACTGAGCCATTTTCCTGTGTTCTGAACTGTGTCACTCACGCGTACCCTCGGGGGTCGAATGCCTGTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560021.1
ENST00000631577.1
CDS GCA 72 bp ATGAGTCCCGACAGCAGCACTGAGTTTACAAGCCTATaGGATGTATTTCAGCACGATCCACCAAATGCAGTT +
Preference number: 6 (lower is better)
Translates to: MSPDSSTEFTSL*DVFQHDPPNAV
Trigger: AACTGCATTTGGTGGATCGTGCTGAAATACATCGCATAGGCTTGTAAACTCAGTGCTGCTGTCGGGACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560050.1
ENST00000632505.1
CDS GCA 72 bp AAGCCTATGCGATGTATTTCAGCACGATCCACCAAATaGAGTTACAGATGTCAAGAGTTCTCAGAACAAGTG +
Preference number: 6 (lower is better)
Translates to: KPMRCISARSTK*SYRCQEFSEQV
Trigger: CACTTGTTCTGAGAACTCTTGACATCTGTAACTGCATTTGGTGGATCGTGCTGAAATACATCGCATAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560050.1
ENST00000632505.1
CDS CAA 90 bp TTGGGGACAGTCACTTTAATCGAGACGTCTTTCTTCTATGGAGATTaGTTCACCACTGGCTTCTCTGATTTGGTGGTTAAGAGTCTGAAA +
Preference number: 6 (lower is better)
Translates to: LGTVTLIETSFFYGD*FTTGFSDLVVKSLK
Trigger: TTTCAGACTCTTAACCACCAAATCAGAGAAGCCAGTGGTGAACAAATCTCCATAGAAGAAAGACGTCTCGATTAAAGTGACTGTCCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560050.1
ENST00000632505.1
CDS CAA 72 bp GTCACTTTAATCGAGACGTCTTTCTTCTATGGAGATTaGTTCACCACTGGCTTCTCTGATTTGGTGGTTAAG +
Preference number: 6 (lower is better)
Translates to: VTLIETSFFYGD*FTTGFSDLVVK
Trigger: CTTAACCACCAAATCAGAGAAGCCAGTGGTGAACAAATCTCCATAGAAGAAAGACGTCTCGATTAAAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560050.1
ENST00000632505.1