RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM184A (Homo sapiens)

Ensembl gene IDs: ENSG00000111879

Ensembl transcript IDs: ENST00000338891.12, ENST00000352896.9, ENST00000368472.6, ENST00000368475.8, ENST00000448815.2, ENST00000475529.7, ENST00000481884.6, ENST00000482219.6, ENST00000517987.5, ENST00000521043.5, ENST00000521531.5, ENST00000522284.5, ENST00000617072.4, ENST00000621231.4

Found 786 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGAATGTGAAGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGCTTCACTCTGAGCAGGACGTCTTTG +
Preference number: 1 (lower is better)
Translates to: SECEVPGKPLLALGI*RSHWRSFTLSRTSL
Trigger: CAAAGACGTCCTGCTCAGAGTGAAGCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
3UTR TCA 90 bp GTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATGTaGAGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTGGAGAAG +
Preference number: 1 (lower is better)
Translates to: VTVYTELCQHNSFRM*STGQTTPGAGDLEK
Trigger: CTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
3UTR TCA 90 bp CTTTCTGAAATCTGCAGACACAGAGAAGCACTTAGTTGCTGTATATaGGAGTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATT +
Preference number: 1 (lower is better)
Translates to: LSEICRHREALSCCI*EFYLLLVKELHVPI
Trigger: AATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAACTCTCATATACAGCAACTAAGTGCTTCTCTGTGTCTGCAGATTTCAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
3UTR-3UTR TCA 90 bp CAATTCTTTCAGAATGTGAAGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTGGAGAAGCTTCACTCTaGGCAGGACGTCTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: QFFQNVKYRANHSWRWGSGEASL*AGRLWG
Trigger: TCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCTCC...AGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
3UTR-3UTR CCA 90 bp AGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATGTGAAGTACCGGGCAAACCACTCCTaGCGCTGGGGATCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: SNSLYRAVPTQFFQNVKYRANHS*RWGSGE
Trigger: TTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCG...GTACTTCACATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
3UTR-3UTR CCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGAACCACTCCTGGCGCTaGGGATCTGGAGAAGCCACT +
Preference number: 2 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVNHSWR*GSGEAT
Trigger: AGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTT...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
3UTR-3UTR TCA 90 bp GAATTTACATACAACCAACCTGACTTCAGAGCCTATACTCTAAACCATCTCTCTCCAATTGTTATCGGTTaGACTGGGTCCCCAAAAAGA +
Preference number: 2 (lower is better)
Translates to: EFTYNQPDFRAYTLNHLSPIVIG*TGSPKR
Trigger: TCTTTTTGGGGACCCAGTTCAACCGATAACAATTGG...AGAGAGATGGTTTAGAGTATAGGCTCTGAAGTCAGGTTGGTTGTATGTAAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
3UTR-3UTR CCA 90 bp CACAAAGCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTGTTATCGGTTGAACTaGGTCCCCAAAAAGATATAC +
Preference number: 2 (lower is better)
Translates to: HKATHYVVDSEFTYNQPDCYRLN*VPKKIY
Trigger: GTATATCTTTTTGGGGACCCAGTTCAACCGATAACA...GTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGCTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
3UTR-3UTR TCA 90 bp CACAAAGCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACCTTAGTTGCTGTATATaGGAGTTCTACCTCTTACTA +
Preference number: 2 (lower is better)
Translates to: HKATHYVVDSEFTYNQPDLSCCI*EFYLLL
Trigger: TAGTAAGAGGTAGAACTCTCATATACAGCAACTAAG...GTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGCTTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
3UTR-3UTR TCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCTCATTCACAGTGTTTaGCATAGGAAAGCCTATTTA +
Preference number: 2 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVLIHSV*HRKAYL
Trigger: TAAATAGGCTTTCCTATGTCAAACACTGTGAATGAG...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
3UTR-3UTR GCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTCACAGGAAATACAGTaGATTTTCAAGTTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: VGETNTFSFTVFDIGKPISQEIQ*IFKLER
Trigger: TCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
3UTR-3UTR GCA 90 bp TATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGAGCCTATACTTCTAAATCTTTGCTGTaGTTCATAAGAGTGGAAGAA +
Preference number: 2 (lower is better)
Translates to: YVVDSEFTYNQPDFRAYTSKSLL*FIRVEE
Trigger: TTCTTCCACTCTTATGAAGCACAGCAAAGATTTAGA...AGTATAGGCTCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
3UTR-3UTR TCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCCTCATTCACAGTGTTTaGCATAGGAAAGCCTATTTA +
Preference number: 2 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFLIHSV*HRKAYL
Trigger: TAAATAGGCTTTCCTATGTCAAACACTGTGAATGAG...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
3UTR CCA 72 bp GAAGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGCTTCACTCTGAGCAGG +
Preference number: 3 (lower is better)
Translates to: EVPGKPLLALGI*RSHWRSFTLSR
Trigger: CCTGCTCAGAGTGAAGCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
3UTR CCA 72 bp TTCTTTCAGAATGTGAAGTACCGGGCAAACCACTCCTaGCGCTGGGGATCTGGAGAAGCCACTGGAGAAGCT +
Preference number: 3 (lower is better)
Translates to: FFQNVKYRANHS*RWGSGEATGEA
Trigger: AGCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
3UTR TCA 72 bp TATACAGAGCTGTGCCAACACAATTCTTTCAGAATGTaGAGTACCGGGCAAACCACTCCTGGCGCTGGGGAT +
Preference number: 3 (lower is better)
Translates to: YTELCQHNSFRM*STGQTTPGAGD
Trigger: ATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
3UTR CCA 72 bp AAGGTGAGGCTTTGCACAAAGCTACACACTATGTGGTaGATTCAGAATTTACATACAACCAACCTGACTTCA +
Preference number: 3 (lower is better)
Translates to: KVRLCTKLHTMW*IQNLHTTNLTS
Trigger: TGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGCTTTGTGCAAAGCCTCACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
3UTR TCA 72 bp ATCTGCAGACACAGAGAAGCACTTAGTTGCTGTATATaGGAGTTCTACCTCTTACTAGTAAAAGAATTGCAC +
Preference number: 3 (lower is better)
Translates to: ICRHREALSCCI*EFYLLLVKELH
Trigger: GTGCAATTCTTTTACTAGTAAGAGGTAGAACTCTCATATACAGCAACTAAGTGCTTCTCTGTGTCTGCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
3UTR-3UTR CAA 90 bp TATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGAGCCTATACTAGACAATCTAAATCTTaGCTGTGCTTCATAAGAGTG +
Preference number: 3 (lower is better)
Translates to: YVVDSEFTYNQPDFRAYTRQSKS*LCFIRV
Trigger: CACTCTTATGAAGCACAGCAAAGATTTAGATTGTCT...AGTATAGGCTCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp GTGAAGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTGGAGAAGCCACTGGAAGGTGGCACTGGCTGTaGAAGTGGTTTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: VKYRANHSWRWGSGEATGRWHWL*KWFAAV
Trigger: AACAGCAGCAAACCACTTCCACAGCCAGTGCCACCT...TCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR GCA 90 bp AGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTGGAGAAGCCACTGGAGAAGCTCTGCTATGGCAAGTaGCGTCTGAAGCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: STGQTTPGAGDLEKPLEKLCYGK*RLKLLA
Trigger: TGCCAAAAGCTTCAGACGGCACTTGCCATAGCAGAG...CTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR TCA 90 bp GTGAAGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTGGAGAAGCCACTGGATGGGCCTCGTTTAATTaGGTCACCTCCTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: VKYRANHSWRWGSGEATGWASFN*VTSSSN
Trigger: ATTGGAAGAGGAGGTGACTCAATTAAACGAGGCCCA...TCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR TCA 90 bp AGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTGGAGAAGCCACTGGAGAAGAGTAGTCATGTTCCTTaGGCTCATGCACATGCATCT +
Preference number: 4 (lower is better)
Translates to: STGQTTPGAGDLEKPLEKSSHVP*AHAHAS
Trigger: AGATGCATGTGCATGAGCTCAAGGAACATGACTACT...CTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp AGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTGGAGAAGCCACTGGAGAAGTCCTCTGCCTTTTCCTaGCCTTTATTTACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: STGQTTPGAGDLEKPLEKSSAFS*PLFTEA
Trigger: TGCCTCAGTAAATAAAGGCCAGGAAAAGGCAGAGGA...CTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp GTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCAATGCGTCCTCGTGTGTaGAGGGCCCCAAGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: VELGPQKDIPKSYPPNTSMRPRV*RAPRSG
Trigger: GCCACTTCTTGGGGCCCTGCACACACGAGGACGCAT...TGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAGTTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACTCCTCGGCCCGCGCCTaGCGGAGGCGTCGAGGACAG +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHSSARA*RRRRGQ
Trigger: CTGTCCTCGACGCCTCCGCCAGGCGCGGGCCGAGGA...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR CCA 90 bp AGCTGTGCCAACACAATTCTTTCAGAATGTGAAGTACCGGGCAAACCACTCCTGCGGGCAAACCACTCCTaGCGCTGGGGATCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SCANTILSECEVPGKPLLRANHS*RWGSGE
Trigger: TTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCG...CAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATTGTGTTGGCACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp CTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGCGGGCAAACCACTCCTaGCGCTGGGGATCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LHSEQDVFGENYKARNNVRANHS*RWGSGE
Trigger: TTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCG...CACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR TCA 90 bp ACCGGGCAAACCACTCCTGGCGCTGGGGATCTGGAGAAGCCACTGGAGAAGCTTAAGTTGAGACATTGCTaGCTTCTTATCCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: TGQTTPGAGDLEKPLEKLKLRHC*LLILFM
Trigger: CATGAAGAGGATAAGAAGTCAGCAATGTCTCAACTT...AAGCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp AGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTGGAGAAGCCACTGGAGAAGTGTTCCTTGAGCTCATaGACATGCATCTTACTGATA +
Preference number: 4 (lower is better)
Translates to: STGQTTPGAGDLEKPLEKCSLSS*TCILLI
Trigger: TATCAGTAAGATGCATGTGCATGAGCTCAAGGAACA...CTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR GCA 90 bp GTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCACAGACCCTTTCCACATaGGTCCTCGTGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VELGPQKDIPKSYPPNTSQTLST*VLVCAG
Trigger: CCCTGCACACACGAGGACGCATGTGGAAAGGGTCTG...TGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAGTTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATCCTCGGCCCGCGCCTaGCGGAGGCGTCGAGGACAG +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTSSARA*RRRRGQ
Trigger: CTGTCCTCGACGCCTCCGCCAGGCGCGGGCCGAGGA...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR CCA 90 bp AGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGCTTGGGCCCTTTAGGTaGCACTGGCTGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SFTLSRTSLGKITRHATMLGPFR*HWLWKW
Trigger: CCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAG...CATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR TCA 90 bp AGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAGGAGAAGCTTCACTCTaGGCAGGACGTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RSFTLSRTSLGKITRHATGEASL*AGRLWG
Trigger: TCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCTCC...TGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR GCA 90 bp CAATTCTTTCAGAATGTGAAGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTCTCTCTGAGGTGGTCTaGTGTCATGACATCCAACTC +
Preference number: 4 (lower is better)
Translates to: QFFQNVKYRANHSWRWGSLSEVV*CHDIQL
Trigger: GAGTTGGATGTCATGACAGCAGACCACCTCAGAGAG...AGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACGTGGAGGCAGGCCCGTaGAGCAACGACGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDVEAGP*SNDARE
Trigger: CTCCCGGGCGTCGTTGCTCCACGGGCCTGCCTCCAC...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR CCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACGTGGAGGCAGGCCCGTaGAGCAACGACGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHVEAGP*SNDARE
Trigger: CTCCCGGGCGTCGTTGCTCCACGGGCCTGCCTCCAC...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGACCTGTCCCCGCGGGTaGAGGCAGGCCCGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQTCPRG*RQARGA
Trigger: TGCTCCACGGGCCTGCCTCCACCCGCGGGGACAGGT...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR CCA 90 bp GTGCCAACACAATTCTTTCAGAATGTGAAGTACCGGGCAAACCACTCCTGGCGCCACTGGCTGTGGAAGTaGTTTGCTGCTGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: VPTQFFQNVKYRANHSWRHWLWK*FAAVEL
Trigger: GAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTG...GCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATTGTGTTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp GGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCACTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GRLWGKLQGTQQCVMETPLALGI*RSHWRS
Trigger: GCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAG...TGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR TCA 90 bp CTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCAGAATGTTGTATCTCCCGTCTGTaGGCAGCTTGCAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LGPQKDIPKSYPPNTSECCISRL*AACKSS
Trigger: GGAAGACTTGCAAGCTGCTCACAGACGGGAGATACA...ACATTCTGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACGCTGCTGCCAGCTCATaGCCGGGGTCGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHAAASS*PGSPSS
Trigger: GGAAGATGGCGACCCCGGGCATGAGCTGGCAGCAGC...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR GCA 90 bp AGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGAGCCGCTGTCGTTCTTaGGTAAACTGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SFTLSRTSLGKITRHATMSRCRS*VNWACS
Trigger: ACTGCAAGCCCAGTTTACGCAAGAACGACAGCGGCT...CATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp ACCGGGCAAACCACTCCTGGCGCTGGGGATCTGGAGAAGCCACTGGAGAAGCTTTTCCATTTTAGCAGCTaGCAATTCTTGATGATGATT +
Preference number: 4 (lower is better)
Translates to: TGQTTPGAGDLEKPLEKLFHFSS*QFLMMI
Trigger: AATCATCATCAAGAATTGGCAGCTGCTAAAATGGAA...AAGCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CCA 90 bp ACCGGGCAAACCACTCCTGGCGCTGGGGATCTGGAGAAGCCACTGGAGAAGCTTCTTTTGCTTAGCCAATaGATTAATAACACCAACAGT +
Preference number: 4 (lower is better)
Translates to: TGQTTPGAGDLEKPLEKLLLLSQ*INNTNS
Trigger: ACTGTTGGTGTTATTAATCCATTGGCTAAGCAAAAG...AAGCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp CTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGCCCTTTAGGTGGCACTaGCTGTGGAAGTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LHSEQDVFGENYKARNNVPFRWH*LWKWFA
Trigger: AGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGG...CACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp AGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACACCCTTTAGGTGGCACTaGCTGTGGAAGTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: RSFTLSRTSLGKITRHATPFRWH*LWKWFA
Trigger: AGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGG...TGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp GGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCAAACCACTCCTGGCGCTaGGGATCTGGAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: GRLWGKLQGTQQCVMETPNHSWR*GSGEAT
Trigger: AGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTT...TGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR TCA 90 bp GTGCCAACACAATTCTTTCAGAATGTGAAGTACCGGGCAAACCACTCCTGGCGCTGTTGCAAAGAAGTCTaGGACTGGGAAAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: VPTQFFQNVKYRANHSWRCCKEV*DWESCI
Trigger: GATACAGCTTTCCCAGTCTCAGACTTCTTTGCAACA...GCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATTGTGTTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTGCTGCTGCCAGCTCATaGCCGGGGTCGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSAAASS*PGSPSS
Trigger: GGAAGATGGCGACCCCGGGCATGAGCTGGCAGCAGC...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR GCA 90 bp CTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCAGAATGTGCCAAGAATGCCTGGTaGTACCAGAAGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: LGPQKDIPKSYPPNTSECAKNAW*YQKLHI
Trigger: AATGTGGAGCTTCTGGTAGCACCAGGCATTCTTGGC...ACATTCTGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTGCGAGGGCGCGAATTTaGCCGCCGAGCCGCCGTAAT +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSARARI*PPSRRN
Trigger: ATTACGGCGGCTCGGCGGCCAAATTCGCGCCCTCGC...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR CCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCGCGAGGGCGCGAATTTaGCCGCCGAGCCGCCGTAAT +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCARARI*PPSRRN
Trigger: ATTACGGCGGCTCGGCGGCCAAATTCGCGCCCTCGC...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR CCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCAGCCAGCTGTGCGGTaGCCGGCGAGGGCGCGAATT +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCQPAVR*PARARI
Trigger: AATTCGCGCCCTCGCCGGCCACCGCACAGCTGGCTG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR CCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACAGCCAGCTGTGCGGTaGCCGGCGAGGGCGCGAATT +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIQPAVR*PARARI
Trigger: AATTCGCGCCCTCGCCGGCCACCGCACAGCTGGCTG...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR TCA 90 bp CTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGCTTTCCTGGGAGTCCTaGAGACTAGCAATAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LHSEQDVFGENYKARNNVLSWES*RLAISP
Trigger: AGGACTTATTGCTAGTCTTCAGGACTCCCAGGAAAG...CACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR TCA 90 bp AGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAGTGGTTTGCTGCTGTTaGACTCAATATCGTGGACTG +
Preference number: 4 (lower is better)
Translates to: RSFTLSRTSLGKITRHATVVCCC*TQYRGL
Trigger: CAGTCCACGATATTGAGTTCAACAGCAGCAAACCAC...TGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp GAGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACCCAGAGCACTTAGATTaGGAACACTCACAAACCTGT +
Preference number: 4 (lower is better)
Translates to: EKLHSEQDVFGENYKARNPEHLD*EHSQTC
Trigger: ACAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGG...GTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTCTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPLALGI*RSHWRS
Trigger: GCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAG...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATCTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNLALGI*RSHWRS
Trigger: GCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAG...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATCGGGCAAACCACTCCTaGCGCTGGGGATCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNRANHS*RWGSGE
Trigger: TTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCG...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACCGGGCAAACCACTCCTaGCGCTGGGGATCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHRANHS*RWGSGE
Trigger: TTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCG...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp AGCTGTGCCAACACAATTCTTTCAGAATGTGAAGTACCGGGCAAACCACTCCTGTTTACTGAGGCACTGTaGTCCTGCTGTGACTTCAAT +
Preference number: 4 (lower is better)
Translates to: SCANTILSECEVPGKPLLFTEAL*SCCDFN
Trigger: ATTGAAGTCACAGCAGGATCACAGTGCCTCAGTAAA...CAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATTGTGTTGGCACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR TCA 90 bp ACGTTCCAATTGTTATCGGTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCCTGGCCTTTATTTACTaGGGCACTGTGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TFQLLSVELGPQKDIPKSLAFIY*GTVILL
Trigger: CAGCAGGATCACAGTGCCTCAGTAAATAAAGGCCAG...GGACTTCGGTATATCTTTTTGGGGACCCAGTTCAACCGATAACAATTGGAACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp AGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGAGTAGTCATGTTCCTTaGGCTCATGCACATGCATCT +
Preference number: 4 (lower is better)
Translates to: SFTLSRTSLGKITRHATMSSHVP*AHAHAS
Trigger: AGATGCATGTGCATGAGCTCAAGGAACATGACTACT...CATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR GCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCCTGGCTGTAGTCCATaGTGTGCCCAGCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHPGCSP*CAQPAV
Trigger: CACAGCTGGCTGGGCACAGCATGGACTACAGCCAGG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR GCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACCTGGCTGTAGTCCATaGTGTGCCCAGCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTPGCSP*CAQPAV
Trigger: CACAGCTGGCTGGGCACAGCATGGACTACAGCCAGG...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR CCA 90 bp CTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCAGAATGTTCCTCTGCCTTTTCCTaGCCTTTATTTACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LGPQKDIPKSYPPNTSECSSAFS*PLFTEA
Trigger: TGCCTCAGTAAATAAAGGCCAGGAAAAGGCAGAGGA...ACATTCTGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp GAGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACCCATTTCTCCCTCCTTaGCATCATCAAGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: EKLHSEQDVFGENYKARNPFLPP*HHQAVF
Trigger: AAAAACAGCTTGATGATGCCAAGGAGGGAGAAATGG...GTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTCTTGGGCCCTTTAGGTaGCACTGGCTGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPLGPFR*HWLWKW
Trigger: CCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAG...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVLALGI*RSHWRS
Trigger: GCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAG...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTCTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPILALGI*RSHWRS
Trigger: GCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAG...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTLALGI*RSHWRS
Trigger: GCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAG...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDLALGI*RSHWRS
Trigger: GCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHLALGI*RSHWRS
Trigger: GCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTAACCACTCCTGGCGCTaGGGATCTGGAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPNHSWR*GSGEAT
Trigger: AGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTT...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAACCACTCCTGGCGCTaGGGATCTGGAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHNHSWR*GSGEAT
Trigger: AGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTT...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTCGGGCAAACCACTCCTaGCGCTGGGGATCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPIRANHS*RWGSGE
Trigger: TTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCG...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCGGGCAAACCACTCCTaGCGCTGGGGATCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQRANHS*RWGSGE
Trigger: TTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCGGGCAAACCACTCCTaGCGCTGGGGATCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDRANHS*RWGSGE
Trigger: TTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGACAGGGCCCCAAGAAGTaGCTCTTCCCCAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: ATHYVVDSEFTYNQPDFRQGPKK*LFPKKR
Trigger: TCTCTTCTTGGGGAAGAGCCACTTCTTGGGGCCCTG...TCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp GTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCATTCATTGTGCAGATGTaGAAGGTGAGGCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: VELGPQKDIPKSYPPNTSFIVQM*KVRLCT
Trigger: TGTGCAAAGCCTCACCTTCCACATCTGCACAATGAA...TGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAGTTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp CAAGGCACGCAACAATGTGTAATGGAAACTCCAGTAGTCATGTTCCTTGAGCTCAGGTGGCCAATCTCTTaGTTGGCTGTATTCAACTTG +
Preference number: 4 (lower is better)
Translates to: QGTQQCVMETPVVMFLELRWPIS*LAVFNL
Trigger: CAAGTTGAATACAGCCAATCAAGAGATTGGCCACCT...GAGCTCAAGGAACATGACTACTGGAGTTTCCATTACACATTGTTGCGTGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR TCA 90 bp CAATTGTTATCGGTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCTTTCCTGGGAGTCCTaGAGACTAGCAATAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QLLSVELGPQKDIPKSYPLSWES*RLAISP
Trigger: AGGACTTATTGCTAGTCTTCAGGACTCCCAGGAAAG...AGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAGTTCAACCGATAACAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp CTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGTCCTCTTCCATAGTTTaGAATGCAAGGACATGTGCT +
Preference number: 4 (lower is better)
Translates to: LHSEQDVFGENYKARNNVSSSIV*NARTCA
Trigger: AGCACATGTCCTTGCATTTCAAACTATGGAAGAGGA...CACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR TCA 90 bp CAATTCTTTCAGAATGTGAAGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTTGCTTCTGTTGTAAATaGTTTTCAAGAGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QFFQNVKYRANHSWRWGSCFCCK*FSRALC
Trigger: GCAAAGAGCTCTTGAAAATCATTTACAACAGAAGCA...AGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR TCA 90 bp AGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGGCATCTTTTAGTGATTaGAGCTCTGCAGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: SFTLSRTSLGKITRHATMASFSD*SSAECF
Trigger: GAAGCATTCTGCAGAGCTTCAATCACTAAAAGATGC...CATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR TCA 90 bp AGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGAATTCTTTCAGAATGTaGAGTACCGGGCAAACCACT +
Preference number: 4 (lower is better)
Translates to: SFTLSRTSLGKITRHATMNSFRM*STGQTT
Trigger: AGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATT...CATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR GCA 90 bp CAATTGTTATCGGTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTGCTTCTGCACAAAGTTaGATGTCCTCAACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QLLSVELGPQKDIPKSYPASAQS*MSSTLC
Trigger: GCACAGAGTTGAGGACATGCAACTTTGTGCAGAAGC...AGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAGTTCAACCGATAACAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp CAATGTGTAATGGAAACTCCAGTAGTCATGTTCCTTGAGCTCATGCACATGCATGACATGCTGGGCTTCTaGACAAAGTTGCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: QCVMETPVVMFLELMHMHDMLGF*TKLHVL
Trigger: GAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTC...ATGCATGTGCATGAGCTCAAGGAACATGACTACTGGAGTTTCCATTACACATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp GGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCACTGAACATTGTTCTCTaGTATGGCAAGTGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: GRLWGKLQGTQQCVMETPLNIVL*YGKCRL
Trigger: CAGACGGCACTTGCCATAGCAGAGAACAATGTTCAG...TGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp CAATTGTTATCGGTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTGTGGACAGCTTCAATTaGCATATGGTGCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: QLLSVELGPQKDIPKSYPVDSFN*HMVLPS
Trigger: GCTTGGAAGCACCATATGGCAATTGAAGCTGTCCAC...AGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAGTTCAACCGATAACAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp CAATTCTTTCAGAATGTGAAGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTTTTCTTATCCCTAATTaGATTACTGTGGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: QFFQNVKYRANHSWRWGSFLIPN*ITVDSF
Trigger: GAAGCTGTCCACAGTAATGCAATTAGGGATAAGAAA...AGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp AAATCTGCAGACACAGAGAAGCACTTAGTTGCTGTATATGAGAGTTCTACCTCTGCCGAATGCCAAGAATaGCTGGTGCTACCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KSADTEKHLVAVYESSTSAECQE*LVLPEA
Trigger: AGCTTCTGGTAGCACCAGGCATTCTTGGCATTCGGC...AGAGGTAGAACTCTCATATACAGCAACTAAGTGCTTCTCTGTGTCTGCAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCTTGGGCCCTTTAGGTaGCACTGGCTGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCLGPFR*HWLWKW
Trigger: CCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAG...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTCTTGGGCCCTTTAGGTaGCACTGGCTGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPILGPFR*HWLWKW
Trigger: CCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAG...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCTTGGGCCCTTTAGGTaGCACTGGCTGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHLGPFR*HWLWKW
Trigger: CCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDILALGI*RSHWRS
Trigger: GCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAG...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCLALGI*RSHWRS
Trigger: GCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGAACCACTCCTGGCGCTaGGGATCTGGAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQNHSWR*GSGEAT
Trigger: AGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTT...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCAACCACTCCTGGCGCTaGGGATCTGGAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCNHSWR*GSGEAT
Trigger: AGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTT...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTAACCACTCCTGGCGCTaGGGATCTGGAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPINHSWR*GSGEAT
Trigger: AGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTT...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCCGGGCAAACCACTCCTaGCGCTGGGGATCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFRANHS*RWGSGE
Trigger: TTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCG...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCGGGCAAACCACTCCTaGCGCTGGGGATCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCRANHS*RWGSGE
Trigger: TTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCGGGCAAACCACTCCTaGCGCTGGGGATCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSRANHS*RWGSGE
Trigger: TTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCG...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp AAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCAGTAGTCATGTTCCTCCGGAAGCCCTCCATTaGCTCTCTGTGTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: KITRHATMCNGNSSSHVPPEALH*LSVCIF
Trigger: AAAGATGCACACAGAGAGTCAATGGAGGGCTTCCGG...AGGAACATGACTACTGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR TCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTCCGGAAGCCCTCCATTaGCTCTCTGTGTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPPEALH*LSVCIF
Trigger: AAAGATGCACACAGAGAGTCAATGGAGGGCTTCCGG...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTGGAGAAGCTTCACTCTaGGCAGGACGTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSGEASL*AGRLWG
Trigger: TCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCTCC...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368472.6
ENST00000475529.7
ENST00000617072.4
CDS-3UTR GCA 90 bp GAGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACTTTGAGGGCTTGAATTaGAGATTCATGCTCATCATT +
Preference number: 4 (lower is better)
Translates to: EKLHSEQDVFGENYKARNFEGLN*RFMLII
Trigger: AATGATGAGCATGAATCTGCAATTCAAGCCCTCAAA...GTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp GCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGACTCTGCTATGGCAAGTaGCGTCTGAAGCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: ATHYVVDSEFTYNQPDFRLCYGK*RLKLLA
Trigger: TGCCAAAAGCTTCAGACGGCACTTGCCATAGCAGAG...TCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp AGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAAGTTCTAGAATCTGTTaGTTCTGCTCTTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: RSFTLSRTSLGKITRHATSSRIC*FCSSSR
Trigger: TCTGGATGAAGAGCAGAAGCAACAGATTCTAGAACT...TGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp AGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTTGAGCTCATGCACATaGATCTTACTGATACCTCAA +
Preference number: 4 (lower is better)
Translates to: SFTLSRTSLGKITRHATMLSSCT*ILLIPQ
Trigger: TTGAGGTATCAGTAAGATGCATGTGCATGAGCTCAA...CATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp CTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCAGAATGTTTAATAGAGCATCCTTaGTCTCCTTTAGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LGPQKDIPKSYPPNTSECLIEHP*SPLGCL
Trigger: AAGACAGCCTAAAGGAGACCAAGGATGCTCTATTAA...ACATTCTGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp CATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATAGGTGGCACTGGCTGTaGAAGTGGTTTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: HALSNSLYRAVPTQFFQNRWHWL*KWFAAV
Trigger: AACAGCAGCAAACCACTTCCACAGCCAGTGCCACCT...ATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATCCCTTTAGGTGGCACTaGCTGTGGAAGTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNPFRWH*LWKWFA
Trigger: AGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGG...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCCTTGGGCCCTTTAGGTaGCACTGGCTGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFLGPFR*HWLWKW
Trigger: CCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAG...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTAACCACTCCTGGCGCTaGGGATCTGGAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCNHSWR*GSGEAT
Trigger: AGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTT...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTAACCACTCCTGGCGCTaGGGATCTGGAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSNHSWR*GSGEAT
Trigger: AGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTT...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCAGAATGTGAAGATAGGCAGAGATaGAAATTATGTTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: LGPQKDIPKSYPPNTSECEDRQR*KLCCRM
Trigger: CATTCGGCAACATAATTTCCATCTCTGCCTATCTTC...ACATTCTGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp CTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCAGAATGTTGTTATCGGTTGAACTaGGTCCCCAAAAAGATATAC +
Preference number: 4 (lower is better)
Translates to: LGPQKDIPKSYPPNTSECCYRLN*VPKKIY
Trigger: GTATATCTTTTTGGGGACCCAGTTCAACCGATAACA...ACATTCTGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTATCTCCCGTCTGTaGGCAGCTTGCAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQCISRL*AACKSS
Trigger: GGAAGACTTGCAAGCTGCTCACAGACGGGAGATACA...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCTGTATCTCCCGTCTGTaGGCAGCTTGCAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCCISRL*AACKSS
Trigger: GGAAGACTTGCAAGCTGCTCACAGACGGGAGATACA...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACTGTATCTCCCGTCTGTaGGCAGCTTGCAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHCISRL*AACKSS
Trigger: GGAAGACTTGCAAGCTGCTCACAGACGGGAGATACA...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp AAATCTGCAGACACAGAGAAGCACTTAGTTGCTGTATATGAGAGTTCTACCTCTTGGGCCTCGTTTAATTaGGTCACCTCCTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: KSADTEKHLVAVYESSTSWASFN*VTSSSN
Trigger: ATTGGAAGAGGAGGTGACTCAATTAAACGAGGCCCA...AGAGGTAGAACTCTCATATACAGCAACTAAGTGCTTCTCTGTGTCTGCAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCCGGAAGCCCTCCATTaGCTCTCTGTGTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQPEALH*LSVCIF
Trigger: AAAGATGCACACAGAGAGTCAATGGAGGGCTTCCGG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCCGGAAGCCCTCCATTaGCTCTCTGTGTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDPEALH*LSVCIF
Trigger: AAAGATGCACACAGAGAGTCAATGGAGGGCTTCCGG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACCTGCATGTTGATGGTTaGGTTCTGAGCGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHLHVDG*VLSARK
Trigger: CTTCCTTGCGCTCAGAACTCAACCATCAACATGCAG...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTCTTCACACGCAGAGCTaGGCCAATCACAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPILHTQS*ANHRHK
Trigger: TTTGTGCCTGTGATTGGCTCAGCTCTGCGTGTGAAG...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352896.9
ENST00000368475.8
CDS-3UTR TCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAGAAGCTTCACTCTaGGCAGGACGTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIGEASL*AGRLWG
Trigger: TCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCTCC...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368472.6
ENST00000475529.7
ENST00000617072.4
CDS-3UTR GCA 90 bp CTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCAGAATGTTTGCAAGTCTTCCAATaGCAATCGTTTGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LGPQKDIPKSYPPNTSECLQVFQ*QSFVFF
Trigger: GAAAAAGACAAACGATTGGCATTGGAAGACTTGCAA...ACATTCTGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATCTCTGCTATGGCAAGTaGCGTCTGAAGCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNLCYGK*RLKLLA
Trigger: TGCCAAAAGCTTCAGACGGCACTTGCCATAGCAGAG...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAAGGCACGCAACAATGTGTAATGGAAACTCCAGTAGTCATGTTCCTTGAGCTCCTTTCCACTTCTTTGTaGTTGCTTAATAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: QGTQQCVMETPVVMFLELLSTSL*LLNRAI
Trigger: AATGGCCCTATTAAGCAAGCACAAAGAAGTGGAAAG...GAGCTCAAGGAACATGACTACTGGAGTTTCCATTACACATTGTTGCGTGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp CAATGTGTAATGGAAACTCCAGTAGTCATGTTCCTTGAGCTCATGCACATGCATTGCGTAAACTGGGCTTaGAGTTGTTGCAAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: QCVMETPVVMFLELMHMHCVNWA*SCCKEV
Trigger: GACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCA...ATGCATGTGCATGAGCTCAAGGAACATGACTACTGGAGTTTCCATTACACATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTAGCCGCTGTCGTTCTTaGGTAAACTGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPISRCRS*VNWACS
Trigger: ACTGCAAGCCCAGTTTACGCAAGAACGACAGCGGCT...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGAGCCGCTGTCGTTCTTaGGTAAACTGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVSRCRS*VNWACS
Trigger: ACTGCAAGCCCAGTTTACGCAAGAACGACAGCGGCT...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp AGCTGTGCCAACACAATTCTTTCAGAATGTGAAGTACCGGGCAAACCACTCCTGTCACAGGAAATACAGTaGATTTTCAAGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SCANTILSECEVPGKPLLSQEIQ*IFKLER
Trigger: TCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGA...CAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATTGTGTTGGCACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR GCA 90 bp GTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTTATCGGTTGAACGTAGCGAGGATTCCCTaGCCTGACCTTCCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: VLPLTSKRIARSNCYRLNVARIP*PDLPSN
Trigger: ATTGGAAGGAAGGTCAGGGCAGGGAATCCTCGCTAC...GTTCAACCGATAACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACATGGTCACTATGCGTTaGACATGCTGGGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHMVTMR*TCWASA
Trigger: TGCAGAAGCCCAGCATGTCCAACGCATAGTGACCAT...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACCACTGGCTGTGGAAGTaGTTTGCTGCTGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHHWLWK*FAAVEL
Trigger: GAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTG...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATCACTGGCTGTGGAAGTaGTTTGCTGCTGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNHWLWK*FAAVEL
Trigger: GAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTG...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTAGGTGGCACTGGCTGTaGAAGTGGTTTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSRWHWL*KWFAAV
Trigger: AACAGCAGCAAACCACTTCCACAGCCAGTGCCACCT...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCCCTTTAGGTGGCACTaGCTGTGGAAGTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHPFRWH*LWKWFA
Trigger: AGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCCCTTTAGGTGGCACTaGCTGTGGAAGTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDPFRWH*LWKWFA
Trigger: AGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTGTATCTCCCGTCTGTaGGCAGCTTGCAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCCISRL*AACKSS
Trigger: GGAAGACTTGCAAGCTGCTCACAGACGGGAGATACA...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCTGGCCTTTATTTACTaGGGCACTGTGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDLAFIY*GTVILL
Trigger: CAGCAGGATCACAGTGCCTCAGTAAATAAAGGCCAG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCTGGCCTTTATTTACTaGGGCACTGTGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHLAFIY*GTVILL
Trigger: CAGCAGGATCACAGTGCCTCAGTAAATAAAGGCCAG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCTGGCCTTTATTTACTaGGGCACTGTGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVLAFIY*GTVILL
Trigger: CAGCAGGATCACAGTGCCTCAGTAAATAAAGGCCAG...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCTGGCCTTTATTTACTaGGGCACTGTGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQLAFIY*GTVILL
Trigger: CAGCAGGATCACAGTGCCTCAGTAAATAAAGGCCAG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATATGGCAAGTGCCGTCTaGAGCTTTTGGCATTTGTCA +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNMASAV*SFWHLS
Trigger: TGACAAATGCCAAAAGCTTCAGACGGCACTTGCCAT...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATGGCAAGTGCCGTCTaGAGCTTTTGGCATTTGTCA +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPMASAV*SFWHLS
Trigger: TGACAAATGCCAAAAGCTTCAGACGGCACTTGCCAT...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACTGGGCCTCGTTTAATTaGGTCACCTCCTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHWASFN*VTSSSN
Trigger: ATTGGAAGAGGAGGTGACTCAATTAAACGAGGCCCA...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTTGGGCCTCGTTTAATTaGGTCACCTCCTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPWASFN*VTSSSN
Trigger: ATTGGAAGAGGAGGTGACTCAATTAAACGAGGCCCA...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTGGGCCTCGTTTAATTaGGTCACCTCCTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNWASFN*VTSSSN
Trigger: ATTGGAAGAGGAGGTGACTCAATTAAACGAGGCCCA...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGAAGGTGGCCAATCTCTTaGTTGGCTGTATTCAACTTG +
Preference number: 4 (lower is better)
Translates to: ATHYVVDSEFTYNQPDFRRWPIS*LAVFNL
Trigger: CAAGTTGAATACAGCCAATCAAGAGATTGGCCACCT...TCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACCTTTCCTGGGAGTCCTaGAGACTAGCAATAAGTCCT +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHLSWES*RLAISP
Trigger: AGGACTTATTGCTAGTCTTCAGGACTCCCAGGAAAG...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCCGGAAGCCCTCCATTaGCTCTCTGTGTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCPEALH*LSVCIF
Trigger: AAAGATGCACACAGAGAGTCAATGGAGGGCTTCCGG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTTGATGGTTGAGTTCTaGGCGCAAGGAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNLMVEF*AQGSKH
Trigger: ATGCTTGCTTCCTTGCGCTCAGAACTCAACCATCAA...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACTTGATGGTTGAGTTCTaGGCGCAAGGAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHLMVEF*AQGSKH
Trigger: ATGCTTGCTTCCTTGCGCTCAGAACTCAACCATCAA...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCTGCATGTTGATGGTTaGGTTCTGAGCGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQLHVDG*VLSARK
Trigger: CTTCCTTGCGCTCAGAACTCAACCATCAACATGCAG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTCTGCATGTTGATGGTTaGGTTCTGAGCGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSLHVDG*VLSARK
Trigger: CTTCCTTGCGCTCAGAACTCAACCATCAACATGCAG...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACGTGGTTTGCTGCTGTTaGACTCAATATCGTGGACTG +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHVVCCC*TQYRGL
Trigger: CAGTCCACGATATTGAGTTCAACAGCAGCAAACCAC...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp AAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCAGTAGTCATGTTCCTGTGGTTTGCTGCTGTTaGACTCAATATCGTGGACTG +
Preference number: 4 (lower is better)
Translates to: KITRHATMCNGNSSSHVPVVCCC*TQYRGL
Trigger: CAGTCCACGATATTGAGTTCAACAGCAGCAAACCAC...AGGAACATGACTACTGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR TCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATGGAGAAGCTTCACTCTaGGCAGGACTCAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNGEASL*AGLKNV
Trigger: GACATTTTTGAGTCCTGCTCAGAGTGAAGCTTCTCC...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000521043.5
ENST00000621231.4
CDS-3UTR TCA 90 bp CAATGTGTAATGGAAACTCCAGTAGTCATGTTCCTTGAGCTCATGCACATGCATAATTCTTTCAGAATGTaGAGTACCGGGCAAACCACT +
Preference number: 4 (lower is better)
Translates to: QCVMETPVVMFLELMHMHNSFRM*STGQTT
Trigger: AGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATT...ATGCATGTGCATGAGCTCAAGGAACATGACTACTGGAGTTTCCATTACACATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR TCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCTTCACACGCAGAGCTaGGCCAATCACAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCLHTQS*ANHRHK
Trigger: TTTGTGCCTGTGATTGGCTCAGCTCTGCGTGTGAAG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352896.9
ENST00000368475.8
CDS-3UTR TCA 90 bp GGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCAGCACATGCATCTTACTaGTACCTCAAAAATGTCTTG +
Preference number: 4 (lower is better)
Translates to: GRLWGKLQGTQQCVMETPAHASY*YLKNVL
Trigger: CAAGACATTTTTGAGGTATCAGTAAGATGCATGTGC...TGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR TCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGGGAGAAGCTTCACTCTaGGCAGGACTGTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVGEASL*AGLFVG
Trigger: ACCAACAAACAGTCCTGCTCAGAGTGAAGCTTCTCC...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481884.6
ENST00000517987.5
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACGGAGAAGCTTCACTCTaGGCAGGACTGTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDGEASL*AGLFVG
Trigger: ACCAACAAACAGTCCTGCTCAGAGTGAAGCTTCTCC...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481884.6
ENST00000517987.5
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGGACATGCTGGGCTTCTaGACAAAGTTGCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQDMLGF*TKLHVL
Trigger: GAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTC...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGGACATGCTGGGCTTCTaGACAAAGTTGCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVDMLGF*TKLHVL
Trigger: GAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTC...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTGACATGCTGGGCTTCTaGACAAAGTTGCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPIDMLGF*TKLHVL
Trigger: GAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTC...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTTATCGGTTGAACGACATGCTGGGCTTCTaGACAAAGTTGCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: VLPLTSKRIARSNCYRLNDMLGF*TKLHVL
Trigger: GAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTC...GTTCAACCGATAACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp CATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATACTATGCGTTGGACATaGTGGGCTTCTGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: HALSNSLYRAVPTQFFQNTMRWT*WASAQS
Trigger: ACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGT...ATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp GAATTTACATACAACCAACCTGACTTCAGAGCCTATACTCTAAACCATCTCTCTACTATGCGTTGGACATaGTGGGCTTCTGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: EFTYNQPDFRAYTLNHLSTMRWT*WASAQS
Trigger: ACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGT...AGAGAGATGGTTTAGAGTATAGGCTCTGAAGTCAGGTTGGTTGTATGTAAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACTCTGCTATGGCAAGTaGCGTCTGAAGCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTLCYGK*RLKLLA
Trigger: TGCCAAAAGCTTCAGACGGCACTTGCCATAGCAGAG...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCTCTGCTATGGCAAGTaGCGTCTGAAGCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHLCYGK*RLKLLA
Trigger: TGCCAAAAGCTTCAGACGGCACTTGCCATAGCAGAG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAATTGTTATCGGTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTTCAATTGCCATATGGTaGTTCCAAGCTAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: QLLSVELGPQKDIPKSYPSIAIW*FQANSS
Trigger: GGAAGAATTAGCTTGGAAGCACCATATGGCAATTGA...AGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAGTTCAACCGATAACAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACGTGGACAGCTTCAATTaGCATATGGTGCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHVDSFN*HMVLPS
Trigger: GCTTGGAAGCACCATATGGCAATTGAAGCTGTCCAC...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTAGCCGCTGTCGTTCTTaGGTAAACTGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSSRCRS*VNWACS
Trigger: ACTGCAAGCCCAGTTTACGCAAGAACGACAGCGGCT...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCAGCCGCTGTCGTTCTTaGGTAAACTGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFSRCRS*VNWACS
Trigger: ACTGCAAGCCCAGTTTACGCAAGAACGACAGCGGCT...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCTCTCTGAGGTGGTCTaGTGTCATGACATCCAACTC +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCLSEVV*CHDIQL
Trigger: GAGTTGGATGTCATGACAGCAGACCACCTCAGAGAG...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCTCTCTGAGGTGGTCTaGTGTCATGACATCCAACTC +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVLSEVV*CHDIQL
Trigger: GAGTTGGATGTCATGACAGCAGACCACCTCAGAGAG...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTCTCTCTGAGGTGGTCTaGTGTCATGACATCCAACTC +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPILSEVV*CHDIQL
Trigger: GAGTTGGATGTCATGACAGCAGACCACCTCAGAGAG...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp GGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCAGTCTATACAGAGCTGTaGCAACACAATTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GRLWGKLQGTQQCVMETPVYTEL*QHNSFR
Trigger: TCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGAC...TGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR GCA 90 bp AAATCTGCAGACACAGAGAAGCACTTAGTTGCTGTATATGAGAGTTCTACCTCTTGGAAGGTGAGGCTTTaGACAAAGCTACACACTATG +
Preference number: 4 (lower is better)
Translates to: KSADTEKHLVAVYESSTSWKVRL*TKLHTM
Trigger: CATAGTGTGTAGCTTTGTGCAAAGCCTCACCTTCCA...AGAGGTAGAACTCTCATATACAGCAACTAAGTGCTTCTCTGTGTCTGCAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATGCGTTGGACATGCTaGGCTTCTGCACAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDMRWTC*ASAQSC
Trigger: GCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCAT...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTATGCGTTGGACATGCTaGGCTTCTGCACAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPIMRWTC*ASAQSC
Trigger: GCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCAT...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGATGCGTTGGACATGCTaGGCTTCTGCACAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQMRWTC*ASAQSC
Trigger: GCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCAT...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACAATGCGTTGGACATGCTaGGCTTCTGCACAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTMRWTC*ASAQSC
Trigger: GCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCAT...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACATGGTCACTATGCGTTaGACATGCTGGGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHMVTMR*TCWASA
Trigger: TGCAGAAGCCCAGCATGTCCAACGCATAGTGACCAT...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATGGTCACTATGCGTTaGACATGCTGGGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDMVTMR*TCWASA
Trigger: TGCAGAAGCCCAGCATGTCCAACGCATAGTGACCAT...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATCATTGTTCTCTGCTATaGCAAGTGCCGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: HALSNSLYRAVPTQFFQNHCSLL*QVPSEA
Trigger: AGCTTCAGACGGCACTTGCCATAGCAGAGAACAATG...ATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CCA 90 bp AGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTTCAGCAAGGAAATCTaGTTTAAGAGATCTTCTACT +
Preference number: 4 (lower is better)
Translates to: SFTLSRTSLGKITRHATMFSKEI*FKRSST
Trigger: AGTAGAAGATCTCTTAAACCAGATTTCCTTGCTGAA...CATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CCA 90 bp AGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGCAACCTTATCTGTTaGTTAGATTCACTTCGTATT +
Preference number: 4 (lower is better)
Translates to: SFTLSRTSLGKITRHATMCNLIC*LDSLRI
Trigger: AATACGAAGTGAATCTAACCAACAGATAAGGTTGCA...CATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp AGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGAGTTTCTTTATGATCTaGTCTCTTTCTGTAAGCATG +
Preference number: 4 (lower is better)
Translates to: SFTLSRTSLGKITRHATMSFFMI*SLSVSM
Trigger: CATGCTTACAGAAAGAGACCAGATCATAAAGAAACT...CATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCACTGGCTGTGGAAGTaGTTTGCTGCTGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDHWLWK*FAAVEL
Trigger: GAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACACTGGCTGTGGAAGTaGTTTGCTGCTGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTHWLWK*FAAVEL
Trigger: GAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTG...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTAGGTGGCACTGGCTGTaGAAGTGGTTTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCRWHWL*KWFAAV
Trigger: AACAGCAGCAAACCACTTCCACAGCCAGTGCCACCT...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCAGGTGGCACTGGCTGTaGAAGTGGTTTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFRWHWL*KWFAAV
Trigger: AACAGCAGCAAACCACTTCCACAGCCAGTGCCACCT...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAAGGTGGCACTGGCTGTaGAAGTGGTTTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIRWHWL*KWFAAV
Trigger: AACAGCAGCAAACCACTTCCACAGCCAGTGCCACCT...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCCCTTTAGGTGGCACTaGCTGTGGAAGTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCPFRWH*LWKWFA
Trigger: AGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCCCCTTTAGGTGGCACTaGCTGTGGAAGTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFPFRWH*LWKWFA
Trigger: AGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGG...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACCATATATTACCTTGGTaGGCTGGGCGATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHHILPW*AGRFSC
Trigger: GCAAGAAAATCGCCCAGCTCACCAAGGTAATATATG...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR TCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTTTACTGAGGCACTGTaGTCCTGCTGTGACTTCAAT +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNFTEAL*SCCDFN
Trigger: ATTGAAGTCACAGCAGGATCACAGTGCCTCAGTAAA...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp TATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGAGCCTATACTTTTACTGAGGCACTGTaGTCCTGCTGTGACTTCAAT +
Preference number: 4 (lower is better)
Translates to: YVVDSEFTYNQPDFRAYTFTEAL*SCCDFN
Trigger: ATTGAAGTCACAGCAGGATCACAGTGCCTCAGTAAA...AGTATAGGCTCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCTGGCCTTTATTTACTaGGGCACTGTGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSLAFIY*GTVILL
Trigger: CAGCAGGATCACAGTGCCTCAGTAAATAAAGGCCAG...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTATGGCAAGTGCCGTCTaGAGCTTTTGGCATTTGTCA +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSMASAV*SFWHLS
Trigger: TGACAAATGCCAAAAGCTTCAGACGGCACTTGCCAT...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ATCTCTCTGAAGGAAAAGATTAAGAACTTCCTGGGTACTATACACCCAGTTTTAATGGCAAGTGCCGTCTaGAGCTTTTGGCATTTGTCA +
Preference number: 4 (lower is better)
Translates to: ISLKEKIKNFLGTIHPVLMASAV*SFWHLS
Trigger: TGACAAATGCCAAAAGCTTCAGACGGCACTTGCCAT...TAAAACTGGGTGTATAGTACCCAGGAAGTTCTTAATCTTTTCCTTCAGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATGGCAAGTGCCGTCTaGAGCTTTTGGCATTTGTCA +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDMASAV*SFWHLS
Trigger: TGACAAATGCCAAAAGCTTCAGACGGCACTTGCCAT...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACTGGGCCTCGTTTAATTaGGTCACCTCCTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHWASFN*VTSSSN
Trigger: ATTGGAAGAGGAGGTGACTCAATTAAACGAGGCCCA...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAGGTGGCCAATCTCTTaGTTGGCTGTATTCAACTTG +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHRWPIS*LAVFNL
Trigger: CAAGTTGAATACAGCCAATCAAGAGATTGGCCACCT...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR TCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTCTTTCCTGGGAGTCCTaGAGACTAGCAATAAGTCCT +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSLSWES*RLAISP
Trigger: AGGACTTATTGCTAGTCTTCAGGACTCCCAGGAAAG...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTCTTTCCTGGGAGTCCTaGAGACTAGCAATAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPILSWES*RLAISP
Trigger: AGGACTTATTGCTAGTCTTCAGGACTCCCAGGAAAG...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCTTTCCTGGGAGTCCTaGAGACTAGCAATAAGTCCT +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCLSWES*RLAISP
Trigger: AGGACTTATTGCTAGTCTTCAGGACTCCCAGGAAAG...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACTTGATGGTTGAGTTCTaGGCGCAAGGAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDLMVEF*AQGSKH
Trigger: ATGCTTGCTTCCTTGCGCTCAGAACTCAACCATCAA...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACTGCATGTTGATGGTTaGGTTCTGAGCGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDILHVDG*VLSARK
Trigger: CTTCCTTGCGCTCAGAACTCAACCATCAACATGCAG...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACAGTGGTTTGCTGCTGTTaGACTCAATATCGTGGACTG +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTVVCCC*TQYRGL
Trigger: CAGTCCACGATATTGAGTTCAACAGCAGCAAACCAC...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCGTGGTTTGCTGCTGTTaGACTCAATATCGTGGACTG +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCVVCCC*TQYRGL
Trigger: CAGTCCACGATATTGAGTTCAACAGCAGCAAACCAC...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTGGAGAAGCTTCACTCTaGGCAGGACTCAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSGEASL*AGLKNV
Trigger: GACATTTTTGAGTCCTGCTCAGAGTGAAGCTTCTCC...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000521043.5
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGGGAGAAGCTTCACTCTaGGCAGGACTCAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQGEASL*AGLKNV
Trigger: GACATTTTTGAGTCCTGCTCAGAGTGAAGCTTCTCC...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000521043.5
ENST00000621231.4
CDS-3UTR TCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCGGAGAAGCTTCACTCTaGGCAGGACTCAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCGEASL*AGLKNV
Trigger: GACATTTTTGAGTCCTGCTCAGAGTGAAGCTTCTCC...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000521043.5
ENST00000621231.4
CDS-3UTR TCA 90 bp TATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGAGCCTATACTAAGGCAGAGTCTTTCTaGAATCTGCAGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: YVVDSEFTYNQPDFRAYTKAESF*NLQTQR
Trigger: TCTCTGTGTCTGCAGATTTCAGAAAGACTCTGCCTT...AGTATAGGCTCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGGCTTCTGCACAAAGTTaGATGTCCTCAACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQASAQS*MSSTLC
Trigger: GCACAGAGTTGAGGACATGCAACTTTGTGCAGAAGC...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGACTATGCGTTGGACATaGTGGGCTTCTGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVTMRWT*WASAQS
Trigger: ACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGT...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTACTATGCGTTGGACATaGTGGGCTTCTGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPITMRWT*WASAQS
Trigger: ACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGT...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCAGCTTCCTTTTCTTTaGTGGCCTGTAGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQQLPFL*WPVGFL
Trigger: CAGAAAGCCTACAGGCCAGCAAAGAAAAGGAAGCTG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTCAGCTTCCTTTTCTTTaGTGGCCTGTAGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSQLPFL*WPVGFL
Trigger: CAGAAAGCCTACAGGCCAGCAAAGAAAAGGAAGCTG...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTTATCGGTTGAACCAGCTTCCTTTTCTTTaGTGGCCTGTAGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VLPLTSKRIARSNCYRLNQLPFL*WPVGFL
Trigger: CAGAAAGCCTACAGGCCAGCAAAGAAAAGGAAGCTG...GTTCAACCGATAACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACTGAACATTGTTCTCTaGTATGGCAAGTGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTLNIVL*YGKCRL
Trigger: CAGACGGCACTTGCCATAGCAGAGAACAATGTTCAG...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCTGAACATTGTTCTCTaGTATGGCAAGTGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVLNIVL*YGKCRL
Trigger: CAGACGGCACTTGCCATAGCAGAGAACAATGTTCAG...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCTGAACATTGTTCTCTaGTATGGCAAGTGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHLNIVL*YGKCRL
Trigger: CAGACGGCACTTGCCATAGCAGAGAACAATGTTCAG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp ATCTCTCTGAAGGAAAAGATTAAGAACTTCCTGGGTACTATACACCCAGTTTTACTGAACATTGTTCTCTaGTATGGCAAGTGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: ISLKEKIKNFLGTIHPVLLNIVL*YGKCRL
Trigger: CAGACGGCACTTGCCATAGCAGAGAACAATGTTCAG...TAAAACTGGGTGTATAGTACCCAGGAAGTTCTTAATCTTTTCCTTCAGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCTGAACATTGTTCTCTaGTATGGCAAGTGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQLNIVL*YGKCRL
Trigger: CAGACGGCACTTGCCATAGCAGAGAACAATGTTCAG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp AAATCTGCAGACACAGAGAAGCACTTAGTTGCTGTATATGAGAGTTCTACCTCTCCACTTCTTTGTGCTTaGTTAATAGGGCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: KSADTEKHLVAVYESSTSPLLCA*LIGPFL
Trigger: GAGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGG...AGAGGTAGAACTCTCATATACAGCAACTAAGTGCTTCTCTGTGTCTGCAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAGCAATAAGTCCTTCTaGAGAGCCAAGACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHSNKSF*RAKTLF
Trigger: GAACAAGGTCTTGGCTCTGCAGAAGGACTTATTGCT...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTAGCAATAAGTCCTTCTaGAGAGCCAAGACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPSNKSF*RAKTLF
Trigger: GAACAAGGTCTTGGCTCTGCAGAAGGACTTATTGCT...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCTCTCTGAGGTGGTCTaGTGTCATGACATCCAACTC +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCLSEVV*CHDIQL
Trigger: GAGTTGGATGTCATGACAGCAGACCACCTCAGAGAG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCATGCGTTGGACATGCTaGGCTTCTGCACAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFMRWTC*ASAQSC
Trigger: GCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCAT...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CTGTATATGAGAGTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTATGCGTTGGACATGCTaGGCTTCTGCACAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LYMRVLPLTSKRIARSNCMRWTC*ASAQSC
Trigger: GCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCAT...ACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAACTCTCATATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCATGGTCACTATGCGTTaGACATGCTGGGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFMVTMR*TCWASA
Trigger: TGCAGAAGCCCAGCATGTCCAACGCATAGTGACCAT...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp TTGCTGTATATGAGAGTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATATGGTCACTATGCGTTaGACATGCTGGGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLYMRVLPLTSKRIARSNMVTMR*TCWASA
Trigger: TGCAGAAGCCCAGCATGTCCAACGCATAGTGACCAT...ATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAACTCTCATATACAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCCTCTGCCTTTTCCTaGCCTTTATTTACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNSSAFS*PLFTEA
Trigger: TGCCTCAGTAAATAAAGGCCAGGAAAAGGCAGAGGA...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTCATTGTTCTCTGCTATaGCAAGTGCCGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSHCSLL*QVPSEA
Trigger: AGCTTCAGACGGCACTTGCCATAGCAGAGAACAATG...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCATTGTTCTCTGCTATaGCAAGTGCCGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHHCSLL*QVPSEA
Trigger: AGCTTCAGACGGCACTTGCCATAGCAGAGAACAATG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp ATCTCTCTGAAGGAAAAGATTAAGAACTTCCTGGGTACTATACACCCAGTTTTACATTGTTCTCTGCTATaGCAAGTGCCGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ISLKEKIKNFLGTIHPVLHCSLL*QVPSEA
Trigger: AGCTTCAGACGGCACTTGCCATAGCAGAGAACAATG...TAAAACTGGGTGTATAGTACCCAGGAAGTTCTTAATCTTTTCCTTCAGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp CACAAAGCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACCCATTTCTCCCTCCTTaGCATCATCAAGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: HKATHYVVDSEFTYNQPDPFLPP*HHQAVF
Trigger: AAAAACAGCTTGATGATGCCAAGGAGGGAGAAATGG...GTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGCTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTGTTGTAAACGTTCTCTaGCAGCTGCTAGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPVVNVL*QLLAHF
Trigger: AAAGTGAGCTAGCAGCTGCCAGAGAACGTTTACAAC...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp ACGTTCCAATTGTTATCGGTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCCTAATTGCATTACTGTaGACAGCTTCAATTGCCATA +
Preference number: 4 (lower is better)
Translates to: TFQLLSVELGPQKDIPKSLIALL*TASIAI
Trigger: TATGGCAATTGAAGCTGTCCACAGTAATGCAATTAG...GGACTTCGGTATATCTTTTTGGGGACCCAGTTCAACCGATAACAATTGGAACGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp CAAGGCACGCAACAATGTGTAATGGAAACTCCAGTAGTCATGTTCCTTGAGCTCAGTTTCTTTATGATCTaGTCTCTTTCTGTAAGCATG +
Preference number: 4 (lower is better)
Translates to: QGTQQCVMETPVVMFLELSFFMI*SLSVSM
Trigger: CATGCTTACAGAAAGAGACCAGATCATAAAGAAACT...GAGCTCAAGGAACATGACTACTGGAGTTTCCATTACACATTGTTGCGTGCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp AGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATGTGAAGTACCCAGAGCACTTAGATTaGGAACACTCACAAACCTGT +
Preference number: 4 (lower is better)
Translates to: SNSLYRAVPTQFFQNVKYPEHLD*EHSQTC
Trigger: ACAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGG...GTACTTCACATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCACTGGCTGTGGAAGTaGTTTGCTGCTGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSHWLWK*FAAVEL
Trigger: GAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTG...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATATCCCTTGGCCGTCCTaGTTGATTAGTCATTACACA +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNIPWPS*LISHYT
Trigger: TGTGTAATGACTAATCAACCAGGACGGCCAAGGGAT...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352896.9
CDS-3UTR CCA 90 bp TTGCTGTATATGAGAGTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATAATGCCAAGAATGCCTaGTGCTACCAGAAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LLYMRVLPLTSKRIARSNNAKNA*CYQKLH
Trigger: GTGGAGCTTCTGGTAGCACCAGGCATTCTTGGCATT...ATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAACTCTCATATACAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACATATATTACCTTGGTaGGCTGGGCGATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTHILPW*AGRFSC
Trigger: GCAAGAAAATCGCCCAGCTCACCAAGGTAATATATG...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR TCA 90 bp GTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTTATCGGTTGAACGCATCTTTGAGGGCTTaGATTGCAGATTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: VLPLTSKRIARSNCYRLNASLRA*IADSCS
Trigger: TGAGCATGAATCTGCAATTCAAGCCCTCAAAGATGC...GTTCAACCGATAACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTCTTCATGAGCATCTTTaGGGGCTTGAATTGCAGATT +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPLHEHL*GLELQI
Trigger: AATCTGCAATTCAAGCCCTCAAAGATGCTCATGAAG...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp AAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCAGTAGTCATGTTCCTCTTCATGAGCATCTTTaGGGGCTTGAATTGCAGATT +
Preference number: 4 (lower is better)
Translates to: KITRHATMCNGNSSSHVPLHEHL*GLELQI
Trigger: AATCTGCAATTCAAGCCCTCAAAGATGCTCATGAAG...AGGAACATGACTACTGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR TCA 90 bp GCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGATTTTCAAACTGTACTTaGAGTTGTCCAAAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: ATHYVVDSEFTYNQPDFRFSNCT*SCPKLR
Trigger: ACGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAA...TCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACTTTACTGAGGCACTGTaGTCCTGCTGTGACTTCAAT +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHFTEAL*SCCDFN
Trigger: ATTGAAGTCACAGCAGGATCACAGTGCCTCAGTAAA...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTACTGAGGCACTGTaGTCCTGCTGTGACTTCAAT +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVFTEAL*SCCDFN
Trigger: ATTGAAGTCACAGCAGGATCACAGTGCCTCAGTAAA...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCATGGCAAGTGCCGTCTaGAGCTTTTGGCATTTGTCA +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFMASAV*SFWHLS
Trigger: TGACAAATGCCAAAAGCTTCAGACGGCACTTGCCAT...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGAATATGGGCCTCGTTTAATTaGGTCACCTCCTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LDMLPLLRLTYLYNVTRIWASFN*VTSSSN
Trigger: ATTGGAAGAGGAGGTGACTCAATTAAACGAGGCCCA...TATTCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR TCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACAAGGTGGCCAATCTCTTaGTTGGCTGTATTCAACTTG +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTRWPIS*LAVFNL
Trigger: CAAGTTGAATACAGCCAATCAAGAGATTGGCCACCT...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR TCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTGCAAAGAAGTCTaGGACTGGGAAAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQCCKEV*DWESCI
Trigger: GATACAGCTTTCCCAGTCTCAGACTTCTTTGCAACA...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTGTTGCAAAGAAGTCTaGGACTGGGAAAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPICCKEV*DWESCI
Trigger: GATACAGCTTTCCCAGTCTCAGACTTCTTTGCAACA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATGCATCTTTTAGTGATTaGAGCTCTGCAGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNASFSD*SSAECF
Trigger: GAAGCATTCTGCAGAGCTTCAATCACTAAAAGATGC...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGATGGTTGAGTTCTaGGCGCAAGGAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCLMVEF*AQGSKH
Trigger: ATGCTTGCTTCCTTGCGCTCAGAACTCAACCATCAA...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACGGTGGTCTGCTGTCATaGCATCCAACTCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHGGLLS*HPTLFQ
Trigger: TTGAAAAAGAGTTGGATGTCATGACAGCAGACCACC...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACAGGTGGTCTGCTGTCATaGCATCCAACTCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTGGLLS*HPTLFQ
Trigger: TTGAAAAAGAGTTGGATGTCATGACAGCAGACCACC...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTGTGGTTTGCTGCTGTTaGACTCAATATCGTGGACTG +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCVVCCC*TQYRGL
Trigger: CAGTCCACGATATTGAGTTCAACAGCAGCAAACCAC...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGTGGTTTGCTGCTGTTaGACTCAATATCGTGGACTG +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIVVCCC*TQYRGL
Trigger: CAGTCCACGATATTGAGTTCAACAGCAGCAAACCAC...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATGTaGAGTACCGGGCAAACCACT +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHNSFRM*STGQTT
Trigger: AGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATT...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTAGTAGTCATGTTCCTTaGGCTCATGCACATGCATCT +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPISSHVP*AHAHAS
Trigger: AGATGCATGTGCATGAGCTCAAGGAACATGACTACT...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368472.6
ENST00000475529.7
ENST00000617072.4
CDS-3UTR TCA 90 bp GTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTTATCGGTTGAACCCAATTGTTATCGGTTaGACTGGGTCCCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: VLPLTSKRIARSNCYRLNPIVIG*TGSPKR
Trigger: TCTTTTTGGGGACCCAGTTCAACCGATAACAATTGG...GTTCAACCGATAACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGGCTGGGCGATTTTCTTaGTCATTTTCAGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQAGRFS*SFSGAS
Trigger: AGATGCACCTGAAAATGAGCAAGAAAATCGCCCAGC...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR GCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTGCTTCTGCACAAAGTTaGATGTCCTCAACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCASAQS*MSSTLC
Trigger: GCACAGAGTTGAGGACATGCAACTTTGTGCAGAAGC...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGCTTCTGCACAAAGTTaGATGTCCTCAACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIASAQS*MSSTLC
Trigger: GCACAGAGTTGAGGACATGCAACTTTGTGCAGAAGC...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCTTCTGCACAAAGTTaGATGTCCTCAACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSASAQS*MSSTLC
Trigger: GCACAGAGTTGAGGACATGCAACTTTGTGCAGAAGC...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTACTATGCGTTGGACATaGTGGGCTTCTGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSTMRWT*WASAQS
Trigger: ACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGT...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAACTATGCGTTGGACATaGTGGGCTTCTGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDITMRWT*WASAQS
Trigger: ACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGT...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCAGCTTCCTTTTCTTTaGTGGCCTGTAGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCQLPFL*WPVGFL
Trigger: CAGAAAGCCTACAGGCCAGCAAAGAAAAGGAAGCTG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCAGCTTCCTTTTCTTTaGTGGCCTGTAGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSQLPFL*WPVGFL
Trigger: CAGAAAGCCTACAGGCCAGCAAAGAAAAGGAAGCTG...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTCCACTTCTTTGTGCTTaGTTAATAGGGCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPPLLCA*LIGPFL
Trigger: GAGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGG...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp AAATCTGCAGACACAGAGAAGCACTTAGTTGCTGTATATGAGAGTTCTACCTCTCTGGGTCATTTGAGTTaGTTGAAGCATTCCAATATG +
Preference number: 4 (lower is better)
Translates to: KSADTEKHLVAVYESSTSLGHLS*LKHSNM
Trigger: CATATTGGAATGCTTCAAGCAACTCAAATGACCCAG...AGAGGTAGAACTCTCATATACAGCAACTAAGTGCTTCTCTGTGTCTGCAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp AAATCTGCAGACACAGAGAAGCACTTAGTTGCTGTATATGAGAGTTCTACCTCTAGTTCTAGAATCTGTTaGTTCTGCTCTTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: KSADTEKHLVAVYESSTSSSRIC*FCSSSR
Trigger: TCTGGATGAAGAGCAGAAGCAACAGATTCTAGAACT...AGAGGTAGAACTCTCATATACAGCAACTAAGTGCTTCTCTGTGTCTGCAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCGTGGACAGCTTCAATTaGCATATGGTGCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFVDSFN*HMVLPS
Trigger: GCTTGGAAGCACCATATGGCAATTGAAGCTGTCCAC...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGAATAGTGGACAGCTTCAATTaGCATATGGTGCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LDMLPLLRLTYLYNVTRIVDSFN*HMVLPS
Trigger: GCTTGGAAGCACCATATGGCAATTGAAGCTGTCCAC...TATTCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR GCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTGTGGACAGCTTCAATTaGCATATGGTGCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCVDSFN*HMVLPS
Trigger: GCTTGGAAGCACCATATGGCAATTGAAGCTGTCCAC...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTAGCAATAAGTCCTTCTaGAGAGCCAAGACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSSNKSF*RAKTLF
Trigger: GAACAAGGTCTTGGCTCTGCAGAAGGACTTATTGCT...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTGCGTAAACTGGGCTTaGAGTTGTTGCAAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPICVNWA*SCCKEV
Trigger: GACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTAATTCTTCAAGCTCTTaGGTAAGCCGCTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPINSSSS*VSRCRS
Trigger: AGAACGACAGCGGCTTACGCAAGAGCTTGAAGAATT...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACAAATTCTTCAAGCTCTTaGGTAAGCCGCTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTNSSSS*VSRCRS
Trigger: AGAACGACAGCGGCTTACGCAAGAGCTTGAAGAATT...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp ACGTTCCAATTGTTATCGGTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCTCTAAATCTTTGCTGTaGTTCATAAGAGTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: TFQLLSVELGPQKDIPKSSKSLL*FIRVEE
Trigger: TTCTTCCACTCTTATGAAGCACAGCAAAGATTTAGA...GGACTTCGGTATATCTTTTTGGGGACCCAGTTCAACCGATAACAATTGGAACGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACTCCTCTGCCTTTTCCTaGCCTTTATTTACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHSSAFS*PLFTEA
Trigger: TGCCTCAGTAAATAAAGGCCAGGAAAAGGCAGAGGA...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCATTGTTCTCTGCTATaGCAAGTGCCGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCHCSLL*QVPSEA
Trigger: AGCTTCAGACGGCACTTGCCATAGCAGAGAACAATG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACATTGTTCTCTGCTATaGCAAGTGCCGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIHCSLL*QVPSEA
Trigger: AGCTTCAGACGGCACTTGCCATAGCAGAGAACAATG...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATCCATTTCTCCCTCCTTaGCATCATCAAGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNPFLPP*HHQAVF
Trigger: AAAAACAGCTTGATGATGCCAAGGAGGGAGAAATGG...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACAGTTGTAAACGTTCTCTaGCAGCTGCTAGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTVVNVL*QLLAHF
Trigger: AAAGTGAGCTAGCAGCTGCCAGAGAACGTTTACAAC...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp ATCTCTCTGAAGGAAAAGATTAAGAACTTCCTGGGTACTATACACCCAGTTTTAGTTGTAAACGTTCTCTaGCAGCTGCTAGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: ISLKEKIKNFLGTIHPVLVVNVL*QLLAHF
Trigger: AAAGTGAGCTAGCAGCTGCCAGAGAACGTTTACAAC...TAAAACTGGGTGTATAGTACCCAGGAAGTTCTTAATCTTTTCCTTCAGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCGTTCTTGCGTAAACTaGGCTTGCAGTTGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQRSCVN*ACSCCK
Trigger: TTTGCAACAACTGCAAGCCCAGTTTACGCAAGAACG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCGTTCTTGCGTAAACTaGGCTTGCAGTTGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDRSCVN*ACSCCK
Trigger: TTTGCAACAACTGCAAGCCCAGTTTACGCAAGAACG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTCGTTCTTGCGTAAACTaGGCTTGCAGTTGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSRSCVN*ACSCCK
Trigger: TTTGCAACAACTGCAAGCCCAGTTTACGCAAGAACG...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCGTTCTTGCGTAAACTaGGCTTGCAGTTGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCRSCVN*ACSCCK
Trigger: TTTGCAACAACTGCAAGCCCAGTTTACGCAAGAACG...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTCCAGAGCACTTAGATTaGGAACACTCACAAACCTGT +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPIPEHLD*EHSQTC
Trigger: ACAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGG...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTCTCAATATCGTGGACTaGAGAATTAGGAATGGGATC +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPLNIVD*RIRNGI
Trigger: GATCCCATTCCTAATTCTCCAGTCCACGATATTGAG...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACCTCAATATCGTGGACTaGAGAATTAGGAATGGGATC +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHLNIVD*RIRNGI
Trigger: GATCCCATTCCTAATTCTCCAGTCCACGATATTGAG...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CACAAAGCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACAAGATGATGTCAAACTaGAGTAGAATGAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: HKATHYVVDSEFTYNQPDKMMSN*SRMSPC
Trigger: ACAAGGGCTCATTCTACTCCAGTTTGACATCATCTT...GTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGCTTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCGCATCTTTGAGGGCTTaGATTGCAGATTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFASLRA*IADSCS
Trigger: TGAGCATGAATCTGCAATTCAAGCCCTCAAAGATGC...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGCATCTTTGAGGGCTTaGATTGCAGATTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIASLRA*IADSCS
Trigger: TGAGCATGAATCTGCAATTCAAGCCCTCAAAGATGC...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCTTCATGAGCATCTTTaGGGGCTTGAATTGCAGATT +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHLHEHL*GLELQI
Trigger: AATCTGCAATTCAAGCCCTCAAAGATGCTCATGAAG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCTTCATGAGCATCTTTaGGGGCTTGAATTGCAGATT +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQLHEHL*GLELQI
Trigger: AATCTGCAATTCAAGCCCTCAAAGATGCTCATGAAG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACTTCATGAGCATCTTTaGGGGCTTGAATTGCAGATT +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTLHEHL*GLELQI
Trigger: AATCTGCAATTCAAGCCCTCAAAGATGCTCATGAAG...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTTTTCAAACTGTACTTaGAGTTGTCCAAAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNFSNCT*SCPKLR
Trigger: ACGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAA...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTTTACTGAGGCACTGTaGTCCTGCTGTGACTTCAAT +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFFTEAL*SCCDFN
Trigger: ATTGAAGTCACAGCAGGATCACAGTGCCTCAGTAAA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAAAGCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTGCTGTAAAAAGCTGTaGCCTTTTCAAAGTATCAAG +
Preference number: 4 (lower is better)
Translates to: HKATHYVVDSEFTYNQPDCCKKL*PFQSIK
Trigger: CTTGATACTTTGAAAAGGTCACAGCTTTTTACAGCA...GTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGCTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAAGGTGGCCAATCTCTTaGTTGGCTGTATTCAACTTG +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIRWPIS*LAVFNL
Trigger: CAAGTTGAATACAGCCAATCAAGAGATTGGCCACCT...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR TCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATAAGTTGAGACATTGCTaGCTTCTTATCCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNKLRHC*LLILFM
Trigger: CATGAAGAGGATAAGAAGTCAGCAATGTCTCAACTT...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATATGTTGCAAAGAAGTCTaGGACTGGGAAAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDICCKEV*DWESCI
Trigger: GATACAGCTTTCCCAGTCTCAGACTTCTTTGCAACA...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTGTTGCAAAGAAGTCTaGGACTGGGAAAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFCCKEV*DWESCI
Trigger: GATACAGCTTTCCCAGTCTCAGACTTCTTTGCAACA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTCCTCTTCCATAGTTTaGAATGCAAGGACATGTGCT +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPISSSIV*NARTCA
Trigger: AGCACATGTCCTTGCATTTCAAACTATGGAAGAGGA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACTCCTCTTCCATAGTTTaGAATGCAAGGACATGTGCT +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHSSSIV*NARTCA
Trigger: AGCACATGTCCTTGCATTTCAAACTATGGAAGAGGA...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCCTCTTCCATAGTTTaGAATGCAAGGACATGTGCT +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVSSSIV*NARTCA
Trigger: AGCACATGTCCTTGCATTTCAAACTATGGAAGAGGA...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCTCCTCTTCCATAGTTTaGAATGCAAGGACATGTGCT +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCSSSIV*NARTCA
Trigger: AGCACATGTCCTTGCATTTCAAACTATGGAAGAGGA...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTGCATCTTTTAGTGATTaGAGCTCTGCAGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSASFSD*SSAECF
Trigger: GAAGCATTCTGCAGAGCTTCAATCACTAAAAGATGC...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGGCATCTTTTAGTGATTaGAGCTCTGCAGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVASFSD*SSAECF
Trigger: GAAGCATTCTGCAGAGCTTCAATCACTAAAAGATGC...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACTCAAACCGAAGAGTCTaGAGTTCCTGTTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDSNRRV*SSCSIS
Trigger: AGAAATGGAACAGGAACTTCAGACTCTTCGGTTTGA...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTCAAACCGAAGAGTCTaGAGTTCCTGTTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPISNRRV*SSCSIS
Trigger: AGAAATGGAACAGGAACTTCAGACTCTTCGGTTTGA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTCAAACCGAAGAGTCTaGAGTTCCTGTTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSSNRRV*SSCSIS
Trigger: AGAAATGGAACAGGAACTTCAGACTCTTCGGTTTGA...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTGGTGGTCTGCTGTCATaGCATCCAACTCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCGGLLS*HPTLFQ
Trigger: TTGAAAAAGAGTTGGATGTCATGACAGCAGACCACC...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGGTGGTCTGCTGTCATaGCATCCAACTCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSGGLLS*HPTLFQ
Trigger: TTGAAAAAGAGTTGGATGTCATGACAGCAGACCACC...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGAATTCTTTCAGAATGTaGAGTACCGGGCAAACCACT +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQNSFRM*STGQTT
Trigger: AGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATT...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTAATTCTTTCAGAATGTaGAGTACCGGGCAAACCACT +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSNSFRM*STGQTT
Trigger: AGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATT...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCAATTCTTTCAGAATGTaGAGTACCGGGCAAACCACT +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCNSFRM*STGQTT
Trigger: AGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATT...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCTTGGCCGTCCTGGTTaGTTAGTCATTACACATTTA +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDLGRPG*LVITHL
Trigger: TAAATGTGTAATGACTAATCAACCAGGACGGCCAAG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352896.9
CDS-3UTR GCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCCACTTCTTTGTGCTTaGTTAATAGGGCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCPLLCA*LIGPFL
Trigger: GAGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGG...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCCACTTCTTTGTGCTTaGTTAATAGGGCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQPLLCA*LIGPFL
Trigger: GAGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTCCACTTCTTTGTGCTTaGTTAATAGGGCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSPLLCA*LIGPFL
Trigger: GAGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGG...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCCACTTCTTTGTGCTTaGTTAATAGGGCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHPLLCA*LIGPFL
Trigger: GAGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GAATTTACATACAACCAACCTGACTTCAGAGCCTATACTCTAAACCATCTCTCTCTTTCCACTTCTTTGTaGTTGCTTAATAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: EFTYNQPDFRAYTLNHLSLSTSL*LLNRAI
Trigger: AATGGCCCTATTAAGCAAGCACAAAGAAGTGGAAAG...AGAGAGATGGTTTAGAGTATAGGCTCTGAAGTCAGGTTGGTTGTATGTAAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACCTGGGTCATTTGAGTTaGTTGAAGCATTCCAATATG +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHLGHLS*LKHSNM
Trigger: CATATTGGAATGCTTCAAGCAACTCAAATGACCCAG...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTAGTTCTAGAATCTGTTaGTTCTGCTCTTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPSSRIC*FCSSSR
Trigger: TCTGGATGAAGAGCAGAAGCAACAGATTCTAGAACT...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATTCAATTGCCATATGGTaGTTCCAAGCTAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: HALSNSLYRAVPTQFFQNSIAIW*FQANSS
Trigger: GGAAGAATTAGCTTGGAAGCACCATATGGCAATTGA...ATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR GCA 90 bp GCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGATTTCTTATCCCTAATTaGATTACTGTGGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: ATHYVVDSEFTYNQPDFRFLIPN*ITVDSF
Trigger: GAAGCTGTCCACAGTAATGCAATTAGGGATAAGAAA...TCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAAGCAATAAGTCCTTCTaGAGAGCCAAGACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDISNKSF*RAKTLF
Trigger: GAACAAGGTCTTGGCTCTGCAGAAGGACTTATTGCT...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTAGCAATAAGTCCTTCTaGAGAGCCAAGACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCSNKSF*RAKTLF
Trigger: GAACAAGGTCTTGGCTCTGCAGAAGGACTTATTGCT...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CTGTATATGAGAGTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTAGCAATAAGTCCTTCTaGAGAGCCAAGACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LYMRVLPLTSKRIARSNCSNKSF*RAKTLF
Trigger: GAACAAGGTCTTGGCTCTGCAGAAGGACTTATTGCT...ACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAACTCTCATATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTGCGTAAACTGGGCTTaGAGTTGTTGCAAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSCVNWA*SCCKEV
Trigger: GACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCA...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTGCGTAAACTGGGCTTaGAGTTGTTGCAAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFCVNWA*SCCKEV
Trigger: GACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATATGCGTAAACTGGGCTTaGAGTTGTTGCAAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDICVNWA*SCCKEV
Trigger: GACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCA...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTAATTCTTCAAGCTCTTaGGTAAGCCGCTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCNSSSS*VSRCRS
Trigger: AGAACGACAGCGGCTTACGCAAGAGCTTGAAGAATT...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATCAAATCAATTGCAGCTaGATGTTGATGGTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNQINCS*MLMVEF
Trigger: GAACTCAACCATCAACATGCAGCTGCAATTGATTTG...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTTGAGCTCATGCACATaGATCTTACTGATACCTCAA +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNLSSCT*ILLIPQ
Trigger: TTGAGGTATCAGTAAGATGCATGTGCATGAGCTCAA...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR GCA 90 bp GAATTTACATACAACCAACCTGACTTCAGAGCCTATACTCTAAACCATCTCTCTAGATGGAAATTATGTTaGCGAATGCCAAGAATGCCT +
Preference number: 4 (lower is better)
Translates to: EFTYNQPDFRAYTLNHLSRWKLC*RMPRMP
Trigger: AGGCATTCTTGGCATTCGGCAACATAATTTCCATCT...AGAGAGATGGTTTAGAGTATAGGCTCTGAAGTCAGGTTGGTTGTATGTAAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATATCCTCTGCCTTTTCCTaGCCTTTATTTACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDISSAFS*PLFTEA
Trigger: TGCCTCAGTAAATAAAGGCCAGGAAAAGGCAGAGGA...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCCATTTCTCCCTCCTTaGCATCATCAAGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVPFLPP*HHQAVF
Trigger: AAAAACAGCTTGATGATGCCAAGGAGGGAGAAATGG...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACCATTTCTCCCTCCTTaGCATCATCAAGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTPFLPP*HHQAVF
Trigger: AAAAACAGCTTGATGATGCCAAGGAGGGAGAAATGG...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTGTAAACGTTCTCTaGCAGCTGCTAGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSVVNVL*QLLAHF
Trigger: AAAGTGAGCTAGCAGCTGCCAGAGAACGTTTACAAC...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCGTTGTAAACGTTCTCTaGCAGCTGCTAGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFVVNVL*QLLAHF
Trigger: AAAGTGAGCTAGCAGCTGCCAGAGAACGTTTACAAC...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACTTAATAGAGCATCCTTaGTCTCCTTTAGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHLIEHP*SPLGCL
Trigger: AAGACAGCCTAAAGGAGACCAAGGATGCTCTATTAA...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTTTAATAGAGCATCCTTaGTCTCCTTTAGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPLIEHP*SPLGCL
Trigger: AAGACAGCCTAAAGGAGACCAAGGATGCTCTATTAA...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCCGTTCTTGCGTAAACTaGGCTTGCAGTTGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFRSCVN*ACSCCK
Trigger: TTTGCAACAACTGCAAGCCCAGTTTACGCAAGAACG...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCCCAGAGCACTTAGATTaGGAACACTCACAAACCTGT +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFPEHLD*EHSQTC
Trigger: ACAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGG...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCCAGAGCACTTAGATTaGGAACACTCACAAACCTGT +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCPEHLD*EHSQTC
Trigger: ACAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCTCAATATCGTGGACTaGAGAATTAGGAATGGGATC +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHLNIVD*RIRNGI
Trigger: GATCCCATTCCTAATTCTCCAGTCCACGATATTGAG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCTCAATATCGTGGACTaGAGAATTAGGAATGGGATC +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDLNIVD*RIRNGI
Trigger: GATCCCATTCCTAATTCTCCAGTCCACGATATTGAG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACTCAATATCGTGGACTaGAGAATTAGGAATGGGATC +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTLNIVD*RIRNGI
Trigger: GATCCCATTCCTAATTCTCCAGTCCACGATATTGAG...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CACAAAGCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACAGATTAAGAACTTCCTaGGTACTATACACCCAGTTT +
Preference number: 4 (lower is better)
Translates to: HKATHYVVDSEFTYNQPDRLRTS*VLYTQF
Trigger: AAACTGGGTGTATAGTACCCAGGAAGTTCTTAATCT...GTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGCTTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATTCCTTACCATATCTTaGAGGTGGCCAATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTFLTIS*RWPISF
Trigger: GAAAGAGATTGGCCACCTCCAAGATATGGTAAGGAA...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621231.4
CDS-3UTR TCA 90 bp CTGTATATGAGAGTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTCTTCATGAGCATCTTTaGGGGCTTGAATTGCAGATT +
Preference number: 4 (lower is better)
Translates to: LYMRVLPLTSKRIARSNCLHEHL*GLELQI
Trigger: AATCTGCAATTCAAGCCCTCAAAGATGCTCATGAAG...ACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAACTCTCATATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACTTTTCAAACTGTACTTaGAGTTGTCCAAAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDFSNCT*SCPKLR
Trigger: ACGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAA...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTTTCAAACTGTACTTaGAGTTGTCCAAAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSFSNCT*SCPKLR
Trigger: ACGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAA...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp AGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATGTGAAGTACTGCTGTAAAAAGCTGTaGCCTTTTCAAAGTATCAAG +
Preference number: 4 (lower is better)
Translates to: SNSLYRAVPTQFFQNVKYCCKKL*PFQSIK
Trigger: CTTGATACTTTGAAAAGGTCACAGCTTTTTACAGCA...GTACTTCACATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR TCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACCTTTCCTCTTCAAGTTaGGATAATCTCTCATTGACT +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHLSSSS*DNLSLT
Trigger: AGTCAATGAGAGATTATCTCAACTTGAAGAGGAAAG...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GAATTTACATACAACCAACCTGACTTCAGAGCCTATACTCTAAACCATCTCTCTCTTTCCTCTTCAAGTTaGGATAATCTCTCATTGACT +
Preference number: 4 (lower is better)
Translates to: EFTYNQPDFRAYTLNHLSLSSSS*DNLSLT
Trigger: AGTCAATGAGAGATTATCTCAACTTGAAGAGGAAAG...AGAGAGATGGTTTAGAGTATAGGCTCTGAAGTCAGGTTGGTTGTATGTAAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACAAGTTGAGACATTGCTaGCTTCTTATCCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDKLRHC*LLILFM
Trigger: CATGAAGAGGATAAGAAGTCAGCAATGTCTCAACTT...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTAAGTTGAGACATTGCTaGCTTCTTATCCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSKLRHC*LLILFM
Trigger: CATGAAGAGGATAAGAAGTCAGCAATGTCTCAACTT...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAAGTTGAGACATTGCTaGCTTCTTATCCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHKLRHC*LLILFM
Trigger: CATGAAGAGGATAAGAAGTCAGCAATGTCTCAACTT...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACGATTTGTGTCTTTGCTaGTGTTGCTCCTCTAATTCT +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHDLCLC*CCSSNS
Trigger: AGAATTAGAGGAGCAACATCAGCAAAGACACAAATC...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACGATTTGTGTCTTTGCTaGTGTTGCTCCTCTAATTCT +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDDLCLC*CCSSNS
Trigger: AGAATTAGAGGAGCAACATCAGCAAAGACACAAATC...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACTGCTTCTGTTGTAAATaGTTTTCAAGAGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHCFCCK*FSRALC
Trigger: GCAAAGAGCTCTTGAAAATCATTTACAACAGAAGCA...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTGCTTCTGTTGTAAATaGTTTTCAAGAGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNCFCCK*FSRALC
Trigger: GCAAAGAGCTCTTGAAAATCATTTACAACAGAAGCA...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTTGCTTCTGTTGTAAATaGTTTTCAAGAGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPCFCCK*FSRALC
Trigger: GCAAAGAGCTCTTGAAAATCATTTACAACAGAAGCA...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCGCATCTTTTAGTGATTaGAGCTCTGCAGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFASFSD*SSAECF
Trigger: GAAGCATTCTGCAGAGCTTCAATCACTAAAAGATGC...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATATCAAACCGAAGAGTCTaGAGTTCCTGTTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDISNRRV*SSCSIS
Trigger: AGAAATGGAACAGGAACTTCAGACTCTTCGGTTTGA...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATACCAACAGTAGGACTTaGGTTAAACACTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNTNSRT*VKHFVE
Trigger: TTCAACAAAGTGTTTAACTCAAGTCCTACTGTTGGT...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCAATTCTTTCAGAATGTaGAGTACCGGGCAAACCACT +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFNSFRM*STGQTT
Trigger: AGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATT...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAAATTCTTTCAGAATGTaGAGTACCGGGCAAACCACT +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDINSFRM*STGQTT
Trigger: AGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATT...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGATGCCTTCTCTTGGCTaGTCCAAATTCTTTGGAATT +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQMPSLG*SKFFGI
Trigger: AATTCCAAAGAATTTGGATCAGCCAAGAGAAGGCAT...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352896.9
CDS-3UTR TCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTGCACATGCATCTTACTaGTACCTCAAAAATGTCTTG +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPIAHASY*YLKNVL
Trigger: CAAGACATTTTTGAGGTATCAGTAAGATGCATGTGC...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR GCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTTGCAAGTCTTCCAATaGCAATCGTTTGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNLQVFQ*QSFVFF
Trigger: GAAAAAGACAAACGATTGGCATTGGAAGACTTGCAA...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTTTGCAAGTCTTCCAATaGCAATCGTTTGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPLQVFQ*QSFVFF
Trigger: GAAAAAGACAAACGATTGGCATTGGAAGACTTGCAA...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCTTTCCACTTCTTTGTaGTTGCTTAATAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDLSTSL*LLNRAI
Trigger: AATGGCCCTATTAAGCAAGCACAAAGAAGTGGAAAG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCTTTCCACTTCTTTGTaGTTGCTTAATAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCLSTSL*LLNRAI
Trigger: AATGGCCCTATTAAGCAAGCACAAAGAAGTGGAAAG...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCTTTCCACTTCTTTGTaGTTGCTTAATAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQLSTSL*LLNRAI
Trigger: AATGGCCCTATTAAGCAAGCACAAAGAAGTGGAAAG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACAAGATCTGAAGCTTaGTGTTGTAAACGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDTRSEA*CCKRSL
Trigger: CAGAGAACGTTTACAACAGCAAGCTTCAGATCTTGT...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACACAAGATCTGAAGCTTaGTGTTGTAAACGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHTRSEA*CCKRSL
Trigger: CAGAGAACGTTTACAACAGCAAGCTTCAGATCTTGT...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTACAAGATCTGAAGCTTaGTGTTGTAAACGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPITRSEA*CCKRSL
Trigger: CAGAGAACGTTTACAACAGCAAGCTTCAGATCTTGT...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTACAAGATCTGAAGCTTaGTGTTGTAAACGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSTRSEA*CCKRSL
Trigger: CAGAGAACGTTTACAACAGCAAGCTTCAGATCTTGT...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGACAAGATCTGAAGCTTaGTGTTGTAAACGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQTRSEA*CCKRSL
Trigger: CAGAGAACGTTTACAACAGCAAGCTTCAGATCTTGT...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTCTGGGTCATTTGAGTTaGTTGAAGCATTCCAATATG +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSLGHLS*LKHSNM
Trigger: CATATTGGAATGCTTCAAGCAACTCAAATGACCCAG...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCTGGGTCATTTGAGTTaGTTGAAGCATTCCAATATG +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCLGHLS*LKHSNM
Trigger: CATATTGGAATGCTTCAAGCAACTCAAATGACCCAG...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCAGTTCTAGAATCTGTTaGTTCTGCTCTTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCSSRIC*FCSSSR
Trigger: TCTGGATGAAGAGCAGAAGCAACAGATTCTAGAACT...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTAGTTCTAGAATCTGTTaGTTCTGCTCTTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSSSRIC*FCSSSR
Trigger: TCTGGATGAAGAGCAGAAGCAACAGATTCTAGAACT...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CACAAAGCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTCTTCCAATCTACTTTaGAGGTTTTTAAGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: HKATHYVVDSEFTYNQPDSSNLL*RFLSSL
Trigger: AAGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGA...GTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGCTTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCAATTGCCATATGGTaGTTCCAAGCTAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQSIAIW*FQANSS
Trigger: GGAAGAATTAGCTTGGAAGCACCATATGGCAATTGA...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTTTTCTTATCCCTAATTaGATTACTGTGGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPFLIPN*ITVDSF
Trigger: GAAGCTGTCCACAGTAATGCAATTAGGGATAAGAAA...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACGTTTCTTCATGCTGTTaGCTTTCTTGTTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDVSSCC*LSCSSS
Trigger: TGAGCTAGAACAAGAAAGGCAACAGCATGAAGAAAC...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGGTTTCTTCATGCTGTTaGCTTTCTTGTTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQVSSCC*LSCSSS
Trigger: TGAGCTAGAACAAGAAAGGCAACAGCATGAAGAAAC...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCAAATCAATTGCAGCTaGATGTTGATGGTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVQINCS*MLMVEF
Trigger: GAACTCAACCATCAACATGCAGCTGCAATTGATTTG...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTCAAATCAATTGCAGCTaGATGTTGATGGTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSQINCS*MLMVEF
Trigger: GAACTCAACCATCAACATGCAGCTGCAATTGATTTG...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCAAATCAATTGCAGCTaGATGTTGATGGTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQQINCS*MLMVEF
Trigger: GAACTCAACCATCAACATGCAGCTGCAATTGATTTG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCGTCTATACAGAGCTGTaGCAACACAATTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCVYTEL*QHNSFR
Trigger: TCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGAC...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACGTCTATACAGAGCTGTaGCAACACAATTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDVYTEL*QHNSFR
Trigger: TCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGAC...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTGTCTATACAGAGCTGTaGCAACACAATTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSVYTEL*QHNSFR
Trigger: TCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGAC...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGGTCTATACAGAGCTGTaGCAACACAATTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQVYTEL*QHNSFR
Trigger: TCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGAC...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACAGTCTATACAGAGCTGTaGCAACACAATTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTVYTEL*QHNSFR
Trigger: TCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGAC...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTTTGATATTTTCCCATaGCTTCTCTTGGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPIFDIFP*LLLADP
Trigger: TGGATCAGCCAAGAGAAGGCATGGGAAAATATCAAA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352896.9
CDS-3UTR GCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTGTTCCTTGAGCTCATaGACATGCATCTTACTGATA +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPICSLSS*TCILLI
Trigger: TATCAGTAAGATGCATGTGCATGAGCTCAAGGAACA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368472.6
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCCATTTCTCCCTCCTTaGCATCATCAAGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSPFLPP*HHQAVF
Trigger: AAAAACAGCTTGATGATGCCAAGGAGGGAGAAATGG...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTAATAGAGCATCCTTaGTCTCCTTTAGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSLIEHP*SPLGCL
Trigger: AAGACAGCCTAAAGGAGACCAAGGATGCTCTATTAA...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTAATAGAGCATCCTTaGTCTCCTTTAGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVLIEHP*SPLGCL
Trigger: AAGACAGCCTAAAGGAGACCAAGGATGCTCTATTAA...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACTCAATATCGTGGACTaGAGAATTAGGAATGGGATC +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDILNIVD*RIRNGI
Trigger: GATCCCATTCCTAATTCTCCAGTCCACGATATTGAG...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCACCATATCTTGGAGGTaGCCAATCTCTTTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCTISWR*PISFFC
Trigger: ACAAAAGAAAGAGATTGGCCACCTCCAAGATATGGT...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621231.4
CDS-3UTR TCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATATTTTCAAACTGTACTTaGAGTTGTCCAAAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIFSNCT*SCPKLR
Trigger: ACGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAA...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTTTTCAAACTGTACTTaGAGTTGTCCAAAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFFSNCT*SCPKLR
Trigger: ACGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACTGCTGTAAAAAGCTGTaGCCTTTTCAAAGTATCAAG +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHCCKKL*PFQSIK
Trigger: CTTGATACTTTGAAAAGGTCACAGCTTTTTACAGCA...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCTTTCCTCTTCAAGTTaGGATAATCTCTCATTGACT +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQLSSSS*DNLSLT
Trigger: AGTCAATGAGAGATTATCTCAACTTGAAGAGGAAAG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCTTTCCTCTTCAAGTTaGGATAATCTCTCATTGACT +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHLSSSS*DNLSLT
Trigger: AGTCAATGAGAGATTATCTCAACTTGAAGAGGAAAG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACTTCAACTGCAAAAGTTaGGACATTGCTGACTTCTTA +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDFNCKS*DIADFL
Trigger: TAAGAAGTCAGCAATGTCTCAACTTTTGCAGTTGAA...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTCAACTGCAAAAGTTaGGACATTGCTGACTTCTTA +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVFNCKS*DIADFL
Trigger: TAAGAAGTCAGCAATGTCTCAACTTTTGCAGTTGAA...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTTCAACTGCAAAAGTTaGGACATTGCTGACTTCTTA +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPIFNCKS*DIADFL
Trigger: TAAGAAGTCAGCAATGTCTCAACTTTTGCAGTTGAA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATTCAACTGCAAAAGTTaGGACATTGCTGACTTCTTA +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTFNCKS*DIADFL
Trigger: TAAGAAGTCAGCAATGTCTCAACTTTTGCAGTTGAA...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCGATTTGTGTCTTTGCTaGTGTTGCTCCTCTAATTCT +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFDLCLC*CCSSNS
Trigger: AGAATTAGAGGAGCAACATCAGCAAAGACACAAATC...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTGATTTGTGTCTTTGCTaGTGTTGCTCCTCTAATTCT +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCDLCLC*CCSSNS
Trigger: AGAATTAGAGGAGCAACATCAGCAAAGACACAAATC...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTGCTTCTGTTGTAAATaGTTTTCAAGAGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSCFCCK*FSRALC
Trigger: GCAAAGAGCTCTTGAAAATCATTTACAACAGAAGCA...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTACCAACAGTAGGACTTaGGTTAAACACTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSTNSRT*VKHFVE
Trigger: TTCAACAAAGTGTTTAACTCAAGTCCTACTGTTGGT...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCACCAACAGTAGGACTTaGGTTAAACACTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCTNSRT*VKHFVE
Trigger: TTCAACAAAGTGTTTAACTCAAGTCCTACTGTTGGT...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACAACCAACAGTAGGACTTaGGTTAAACACTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTTNSRT*VKHFVE
Trigger: TTCAACAAAGTGTTTAACTCAAGTCCTACTGTTGGT...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACCAACAGTAGGACTTaGGTTAAACACTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDTNSRT*VKHFVE
Trigger: TTCAACAAAGTGTTTAACTCAAGTCCTACTGTTGGT...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACACCAACAGTAGGACTTaGGTTAAACACTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHTNSRT*VKHFVE
Trigger: TTCAACAAAGTGTTTAACTCAAGTCCTACTGTTGGT...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACTCATTCACAGTGTTTaGCATAGGAAAGCCTATTTA +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTLIHSV*HRKAYL
Trigger: TAAATAGGCTTTCCTATGTCAAACACTGTGAATGAG...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCTCATTCACAGTGTTTaGCATAGGAAAGCCTATTTA +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCLIHSV*HRKAYL
Trigger: TAAATAGGCTTTCCTATGTCAAACACTGTGAATGAG...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCTCATTCACAGTGTTTaGCATAGGAAAGCCTATTTA +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDLIHSV*HRKAYL
Trigger: TAAATAGGCTTTCCTATGTCAAACACTGTGAATGAG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTCTCATTCACAGTGTTTaGCATAGGAAAGCCTATTTA +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPILIHSV*HRKAYL
Trigger: TAAATAGGCTTTCCTATGTCAAACACTGTGAATGAG...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCTCATTCACAGTGTTTaGCATAGGAAAGCCTATTTA +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHLIHSV*HRKAYL
Trigger: TAAATAGGCTTTCCTATGTCAAACACTGTGAATGAG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp CTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGAATAAGAATTCTTGCCTCTTaGTTGGCTGTATTCAACTTG +
Preference number: 4 (lower is better)
Translates to: LDMLPLLRLTYLYNVTRIRILAS*LAVFNL
Trigger: CAAGTTGAATACAGCCAATCAAGAGGCAAGAATTCT...TATTCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR GCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTTGAGGGCTTGAATTaGAGATTCATGCTCATCATT +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSFEGLN*RFMLII
Trigger: AATGATGAGCATGAATCTGCAATTCAAGCCCTCAAA...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTTGAGGGCTTGAATTaGAGATTCATGCTCATCATT +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQFEGLN*RFMLII
Trigger: AATGATGAGCATGAATCTGCAATTCAAGCCCTCAAA...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTTTGAGGGCTTGAATTaGAGATTCATGCTCATCATT +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPIFEGLN*RFMLII
Trigger: AATGATGAGCATGAATCTGCAATTCAAGCCCTCAAA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCTTGCAAGTCTTCCAATaGCAATCGTTTGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCLQVFQ*QSFVFF
Trigger: GAAAAAGACAAACGATTGGCATTGGAAGACTTGCAA...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACTTTCCACTTCTTTGTaGTTGCTTAATAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDILSTSL*LLNRAI
Trigger: AATGGCCCTATTAAGCAAGCACAAAGAAGTGGAAAG...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CTGTATATGAGAGTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTACAAGATCTGAAGCTTaGTGTTGTAAACGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LYMRVLPLTSKRIARSNCTRSEA*CCKRSL
Trigger: CAGAGAACGTTTACAACAGCAAGCTTCAGATCTTGT...ACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAACTCTCATATACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp CTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGAATAAGTTCTAGAATCTGTTaGTTCTGCTCTTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LDMLPLLRLTYLYNVTRISSRIC*FCSSSR
Trigger: TCTGGATGAAGAGCAGAAGCAACAGATTCTAGAACT...TATTCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR GCA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTCCAATCTACTTTaGAGGTTTTTAAGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNSSNLL*RFLSSL
Trigger: AAGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGA...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTCAATTGCCATATGGTaGTTCCAAGCTAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSSIAIW*FQANSS
Trigger: GGAAGAATTAGCTTGGAAGCACCATATGGCAATTGA...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGAATAAGTTCAATTGCCATATGGTaGTTCCAAGCTAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: DMLPLLRLTYLYNVTRISSIAIW*FQANSS
Trigger: GGAAGAATTAGCTTGGAAGCACCATATGGCAATTGA...ACTTATTCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR GCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTCAATTGCCATATGGTaGTTCCAAGCTAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCSIAIW*FQANSS
Trigger: GGAAGAATTAGCTTGGAAGCACCATATGGCAATTGA...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTCTTATCCCTAATTaGATTACTGTGGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVFLIPN*ITVDSF
Trigger: GAAGCTGTCCACAGTAATGCAATTAGGGATAAGAAA...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCGTTTCTTCATGCTGTTaGCTTTCTTGTTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFVSSCC*LSCSSS
Trigger: TGAGCTAGAACAAGAAAGGCAACAGCATGAAGAAAC...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCAAATCAATTGCAGCTaGATGTTGATGGTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCQINCS*MLMVEF
Trigger: GAACTCAACCATCAACATGCAGCTGCAATTGATTTG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACTTCCATTTTAGCAGCTaGCAATTCTTGATGATGATT +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHFHFSS*QFLMMI
Trigger: AATCATCATCAAGAATTGGCAGCTGCTAAAATGGAA...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000621231.4
CDS-3UTR GCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCGTCTATACAGAGCTGTaGCAACACAATTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFVYTEL*QHNSFR
Trigger: TCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGAC...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGTCTATACAGAGCTGTaGCAACACAATTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIVYTEL*QHNSFR
Trigger: TCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGAC...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTCACAGGAAATACAGTaGATTTTCAAGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSSQEIQ*IFKLER
Trigger: TCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGA...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATCACAGGAAATACAGTaGATTTTCAAGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTSQEIQ*IFKLER
Trigger: TCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGA...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCTCACAGGAAATACAGTaGATTTTCAAGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCSQEIQ*IFKLER
Trigger: TCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGA...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACTCACAGGAAATACAGTaGATTTTCAAGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDSQEIQ*IFKLER
Trigger: TCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGA...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTGTTCCTTGAGCTCATaGACATGCATCTTACTGATA +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSCSLSS*TCILLI
Trigger: TATCAGTAAGATGCATGTGCATGAGCTCAAGGAACA...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368472.6
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACTAATTGCATTACTGTaGACAGCTTCAATTGCCATA +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTLIALL*TASIAI
Trigger: TATGGCAATTGAAGCTGTCCACAGTAATGCAATTAG...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCTAATTGCATTACTGTaGACAGCTTCAATTGCCATA +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQLIALL*TASIAI
Trigger: TATGGCAATTGAAGCTGTCCACAGTAATGCAATTAG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTTAATAGAGCATCCTTaGTCTCCTTTAGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFLIEHP*SPLGCL
Trigger: AAGACAGCCTAAAGGAGACCAAGGATGCTCTATTAA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTTTCAGCAAGGAAATCTaGTTTAAGAGATCTTCTACT +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPFSKEI*FKRSST
Trigger: AGTAGAAGATCTCTTAAACCAGATTTCCTTGCTGAA...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAGTTTCTTTATGATCTaGTCTCTTTCTGTAAGCATG +
Preference number: 4 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHSFFMI*SLSVSM
Trigger: CATGCTTACAGAAAGAGACCAGATCATAAAGAAACT...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTCTTTTGCTTAGCCAATaGATTAATAACACCAACAGT +
Preference number: 4 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPLLLSQ*INNTNS
Trigger: ACTGTTGGTGTTATTAATCCATTGGCTAAGCAAAAG...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000475529.7
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTGCTGTAAAAAGCTGTaGCCTTTTCAAAGTATCAAG +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSCCKKL*PFQSIK
Trigger: CTTGATACTTTGAAAAGGTCACAGCTTTTTACAGCA...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTGCTGTAAAAAGCTGTaGCCTTTTCAAAGTATCAAG +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFCCKKL*PFQSIK
Trigger: CTTGATACTTTGAAAAGGTCACAGCTTTTTACAGCA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTGCTGTAAAAAGCTGTaGCCTTTTCAAAGTATCAAG +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCCCKKL*PFQSIK
Trigger: CTTGATACTTTGAAAAGGTCACAGCTTTTTACAGCA...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCCTTTCCTCTTCAAGTTaGGATAATCTCTCATTGACT +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFLSSSS*DNLSLT
Trigger: AGTCAATGAGAGATTATCTCAACTTGAAGAGGAAAG...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACTTTCCTCTTCAAGTTaGGATAATCTCTCATTGACT +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDILSSSS*DNLSLT
Trigger: AGTCAATGAGAGATTATCTCAACTTGAAGAGGAAAG...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATATTCAACTGCAAAAGTTaGGACATTGCTGACTTCTTA +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIFNCKS*DIADFL
Trigger: TAAGAAGTCAGCAATGTCTCAACTTTTGCAGTTGAA...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR TCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCAACAGTAGGACTTaGGTTAAACACTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFTNSRT*VKHFVE
Trigger: TTCAACAAAGTGTTTAACTCAAGTCCTACTGTTGGT...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCTCATTCACAGTGTTTaGCATAGGAAAGCCTATTTA +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSLIHSV*HRKAYL
Trigger: TAAATAGGCTTTCCTATGTCAAACACTGTGAATGAG...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACTCATTCACAGTGTTTaGCATAGGAAAGCCTATTTA +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDILIHSV*HRKAYL
Trigger: TAAATAGGCTTTCCTATGTCAAACACTGTGAATGAG...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR TCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTAATCACAGGCACAAATaGAAATTGCCTATCTCTAGA +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSNHRHK*KLPISR
Trigger: TCTAGAGATAGGCAATTTTCATTTGTGCCTGTGATT...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352896.9
CDS-3UTR TCA 90 bp CTGTATATGAGAGTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTCTTAGTTGCTGTATATaGGAGTTCTACCTCTTACTA +
Preference number: 4 (lower is better)
Translates to: LYMRVLPLTSKRIARSNCLSCCI*EFYLLL
Trigger: TAGTAAGAGGTAGAACTCTCATATACAGCAACTAAG...ACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAACTCTCATATACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp CTGTATATGAGAGTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTTTTGAGGGCTTGAATTaGAGATTCATGCTCATCATT +
Preference number: 4 (lower is better)
Translates to: LYMRVLPLTSKRIARSNCFEGLN*RFMLII
Trigger: AATGATGAGCATGAATCTGCAATTCAAGCCCTCAAA...ACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAACTCTCATATACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATATTGCAAGTCTTCCAATaGCAATCGTTTGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDILQVFQ*QSFVFF
Trigger: GAAAAAGACAAACGATTGGCATTGGAAGACTTGCAA...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCTCTTCCAATCTACTTTaGAGGTTTTTAAGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCSSNLL*RFLSSL
Trigger: AAGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGA...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACTCTTCCAATCTACTTTaGAGGTTTTTAAGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDSSNLL*RFLSSL
Trigger: AAGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGA...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCTTCCAATCTACTTTaGAGGTTTTTAAGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVSSNLL*RFLSSL
Trigger: AAGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGA...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATATTTCTTATCCCTAATTaGATTACTGTGGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIFLIPN*ITVDSF
Trigger: GAAGCTGTCCACAGTAATGCAATTAGGGATAAGAAA...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR GCA 90 bp ATTCTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGATTTCTTATCCCTAATTaGATTACTGTGGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: ILDMLPLLRLTYLYNVTRFLIPN*ITVDSF
Trigger: GAAGCTGTCCACAGTAATGCAATTAGGGATAAGAAA...TCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR GCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTTCCATTTTAGCAGCTaGCAATTCTTGATGATGATT +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPIFHFSS*QFLMMI
Trigger: AATCATCATCAAGAATTGGCAGCTGCTAAAATGGAA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000621231.4
CDS-3UTR GCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACTTCCATTTTAGCAGCTaGCAATTCTTGATGATGATT +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDFHFSS*QFLMMI
Trigger: AATCATCATCAAGAATTGGCAGCTGCTAAAATGGAA...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000621231.4
CDS-3UTR GCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTCCATTTTAGCAGCTaGCAATTCTTGATGATGATT +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVFHFSS*QFLMMI
Trigger: AATCATCATCAAGAATTGGCAGCTGCTAAAATGGAA...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000621231.4
CDS-3UTR GCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTCACAGGAAATACAGTaGATTTTCAAGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFSQEIQ*IFKLER
Trigger: TCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTCACAGGAAATACAGTaGATTTTCAAGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSSQEIQ*IFKLER
Trigger: TCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGA...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTCACAGGAAATACAGTaGATTTTCAAGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EIQCIFKLERQILSHSQCSQEIQ*IFKLER
Trigger: TCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGA...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR GCA 90 bp ATTCTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGAGGTCTAAAGAATTCTTaGCTCTTGATTGGCTGTATT +
Preference number: 4 (lower is better)
Translates to: ILDMLPLLRLTYLYNVTRGLKNS*LLIGCI
Trigger: AATACAGCCAATCAAGAGGCAAGAATTCTTTAGACC...TCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR CCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCTAATTGCATTACTGTaGACAGCTTCAATTGCCATA +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSLIALL*TASIAI
Trigger: TATGGCAATTGAAGCTGTCCACAGTAATGCAATTAG...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGAATACTAATTGCATTACTGTaGACAGCTTCAATTGCCATA +
Preference number: 4 (lower is better)
Translates to: LDMLPLLRLTYLYNVTRILIALL*TASIAI
Trigger: TATGGCAATTGAAGCTGTCCACAGTAATGCAATTAG...TATTCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR CCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACTAATTGCATTACTGTaGACAGCTTCAATTGCCATA +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDILIALL*TASIAI
Trigger: TATGGCAATTGAAGCTGTCCACAGTAATGCAATTAG...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTTCAGCAAGGAAATCTaGTTTAAGAGATCTTCTACT +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPIFSKEI*FKRSST
Trigger: AGTAGAAGATCTCTTAAACCAGATTTCCTTGCTGAA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCTTCAGCAAGGAAATCTaGTTTAAGAGATCTTCTACT +
Preference number: 4 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCFSKEI*FKRSST
Trigger: AGTAGAAGATCTCTTAAACCAGATTTCCTTGCTGAA...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACTTCAGCAAGGAAATCTaGTTTAAGAGATCTTCTACT +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDFSKEI*FKRSST
Trigger: AGTAGAAGATCTCTTAAACCAGATTTCCTTGCTGAA...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCAACCTTATCTGTTaGTTAGATTCACTTCGTATT +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQCNLIC*LDSLRI
Trigger: AATACGAAGTGAATCTAACCAACAGATAAGGTTGCA...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTGCAACCTTATCTGTTaGTTAGATTCACTTCGTATT +
Preference number: 4 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVCNLIC*LDSLRI
Trigger: AATACGAAGTGAATCTAACCAACAGATAAGGTTGCA...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTAGTTTCTTTATGATCTaGTCTCTTTCTGTAAGCATG +
Preference number: 4 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSSFFMI*SLSVSM
Trigger: CATGCTTACAGAAAGAGACCAGATCATAAAGAAACT...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACAGTTTCTTTATGATCTaGTCTCTTTCTGTAAGCATG +
Preference number: 4 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDSFFMI*SLSVSM
Trigger: CATGCTTACAGAAAGAGACCAGATCATAAAGAAACT...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTAGTTTCTTTATGATCTaGTCTCTTTCTGTAAGCATG +
Preference number: 4 (lower is better)
Translates to: VGETNTFSFTVFDIGKPISFFMI*SLSVSM
Trigger: CATGCTTACAGAAAGAGACCAGATCATAAAGAAACT...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACAAGTTTCTTTATGATCTaGTCTCTTTCTGTAAGCATG +
Preference number: 4 (lower is better)
Translates to: QCIFKLERQILSHSQCLTSFFMI*SLSVSM
Trigger: CATGCTTACAGAAAGAGACCAGATCATAAAGAAACT...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCTTTTGCTTAGCCAATaGATTAATAACACCAACAGT +
Preference number: 4 (lower is better)
Translates to: QEIQCIFKLERQILSHSQLLLSQ*INNTNS
Trigger: ACTGTTGGTGTTATTAATCCATTGGCTAAGCAAAAG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000475529.7
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCTTTTGCTTAGCCAATaGATTAATAACACCAACAGT +
Preference number: 4 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHLLLSQ*INNTNS
Trigger: ACTGTTGGTGTTATTAATCCATTGGCTAAGCAAAAG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000475529.7
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp CTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGAATATTCTTGCCTCTTGATTaGCTGTATTCAACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LDMLPLLRLTYLYNVTRIFLPLD*LYSTCL
Trigger: AAGACAAGTTGAATACAGCCAATCAAGAGGCAAGAA...TATTCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR CCA 90 bp ATCTCTCTGAAGGAAAAGATTAAGAACTTCCTGGGTACTATACACCCAGTTTTACTACACACTATGTGGTaGATTCAGAATTTACATACA +
Preference number: 4 (lower is better)
Translates to: ISLKEKIKNFLGTIHPVLLHTMW*IQNLHT
Trigger: TGTATGTAAATTCTGAATCCACCACATAGTGTGTAG...TAAAACTGGGTGTATAGTACCCAGGAAGTTCTTAATCTTTTCCTTCAGAGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR GCA 90 bp GATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGAATAAGTTCTTCCAATCTACTTTaGAGGTTTTTAAGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: DMLPLLRLTYLYNVTRISSSNLL*RFLSSL
Trigger: AAGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGA...ACTTATTCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR GCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTTCCATTTTAGCAGCTaGCAATTCTTGATGATGATT +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSFHFSS*QFLMMI
Trigger: AATCATCATCAAGAATTGGCAGCTGCTAAAATGGAA...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000621231.4
CDS-3UTR CCA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATATGCAACCTTATCTGTTaGTTAGATTCACTTCGTATT +
Preference number: 4 (lower is better)
Translates to: VHFQVGETNTFSFTVFDICNLIC*LDSLRI
Trigger: AATACGAAGTGAATCTAACCAACAGATAAGGTTGCA...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTGCAACCTTATCTGTTaGTTAGATTCACTTCGTATT +
Preference number: 4 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFCNLIC*LDSLRI
Trigger: AATACGAAGTGAATCTAACCAACAGATAAGGTTGCA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CCA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCTTTTGCTTAGCCAATaGATTAATAACACCAACAGT +
Preference number: 4 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSLLLSQ*INNTNS
Trigger: ACTGTTGGTGTTATTAATCCATTGGCTAAGCAAAAG...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000475529.7
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4
CDS CCA 90 bp TGCTGTGCCCAGCCAGCTGTGCGGTGGCCGGCGAGGGCGCGAATTTaGCCGCCGAGCCGCCGTAATAGTGCTGCTGCCAGCTCATGCCCG +
Preference number: 5 (lower is better)
Translates to: CCAQPAVRWPARARI*PPSRRNSAAASSCP
Trigger: CGGGCATGAGCTGGCAGCAGCACTATTACGGCGGCTCGGCGGCCAAATTCGCGCCCTCGCCGGCCACCGCACAGCTGGCTGGGCACAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338891.12
ENST00000521531.5
ENST00000621231.4
CDS GCA 90 bp CGATTTTCTTGCTCATTTTCAGGTGCATCTCCTGGCTGTAGTCCATaGTGTGCCCAGCCAGCTGTGCGGTGGCCGGCGAGGGCGCGAATT +
Preference number: 5 (lower is better)
Translates to: RFSCSFSGASPGCSP*CAQPAVRWPARARI
Trigger: AATTCGCGCCCTCGCCGGCCACCGCACAGCTGGCTGGGCACAGCATGGACTACAGCCAGGAGATGCACCTGAAAATGAGCAAGAAAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338891.12
ENST00000521531.5
ENST00000621231.4
CDS GCA 90 bp CCTTCGGTTAGCAGAACGGGTGTCGATTTACAGACCCTTTCCACATaGGTCCTCGTGTGTGCAGGGCCCCAAGAAGTGGCTCTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: PSVSRTGVDLQTLST*VLVCAGPQEVALPQ
Trigger: TTGGGGAAGAGCCACTTCTTGGGGCCCTGCACACACGAGGACGCATGTGGAAAGGGTCTGTAAATCGACACCCGTTCTGCTAACCGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS CCA 90 bp TCAGAATGTGAAGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTaGAGAAGCCACTGGAGAAGCTTCACTCTGAGCAGGACTCAAAAA +
Preference number: 5 (lower is better)
Translates to: SECEVPGKPLLALGI*RSHWRSFTLSRTQK
Trigger: TTTTTGAGTCCTGCTCAGAGTGAAGCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000621231.4
CDS CCA 90 bp GGCACTGGCTGTGGAAGTGGTTTGCTGCTGTTGAACTCAATATCGTaGACTGGAGAATTAGGAATGGGATCCAGGCGGTTAGGATGTCCA +
Preference number: 5 (lower is better)
Translates to: GTGCGSGLLLLNSIS*TGELGMGSRRLGCP
Trigger: TGGACATCCTAACCGCCTGGATCCCATTCCTAATTCTCCAGTCCACGATATTGAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp AGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACACATGGTCACTATGCGTaGGACATGCTGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RSFTLSRTSLGKITRHATHGHYA*DMLGFC
Trigger: GCAGAAGCCCAGCATGTCCAACGCATAGTGACCATG...TGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS CCA 90 bp TGGCTGTGGAAGTGGTTTGCTGCTGTTGAACTCAATATCGTGGACTaGAGAATTAGGAATGGGATCCAGGCGGTTAGGATGTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: WLWKWFAAVELNIVD*RIRNGIQAVRMSIA
Trigger: GGCAATGGACATCCTAACCGCCTGGATCCCATTCCTAATTCTCCAGTCCACGATATTGAGTTCAACAGCAGCAAACCACTTCCACAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000617072.4
ENST00000621231.4
CDS CCA 90 bp AGCAGGACTCAAAAATGTCTTGGGCCCTTTAGGTGGCACTGGCTGTaGAAGTGGTTTGCTGCTGTTGAACTCAATATCGTGGACTGGAGA +
Preference number: 5 (lower is better)
Translates to: SRTQKCLGPFRWHWL*KWFAAVELNIVDWR
Trigger: TCTCCAGTCCACGATATTGAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAGACATTTTTGAGTCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000621231.4
CDS CCA 90 bp ACTCTGAGCAGGACTCAAAAATGTCTTGGGCCCTTTAGGTGGCACTaGCTGTGGAAGTGGTTTGCTGCTGTTGAACTCAATATCGTGGAC +
Preference number: 5 (lower is better)
Translates to: TLSRTQKCLGPFRWH*LWKWFAAVELNIVD
Trigger: GTCCACGATATTGAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAGACATTTTTGAGTCCTGCTCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000621231.4
CDS CCA 90 bp AGCTTCACTCTGAGCAGGACTCAAAAATGTCTTGGGCCCTTTAGGTaGCACTGGCTGTGGAAGTGGTTTGCTGCTGTTGAACTCAATATC +
Preference number: 5 (lower is better)
Translates to: SFTLSRTQKCLGPFR*HWLWKWFAAVELNI
Trigger: GATATTGAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAGACATTTTTGAGTCCTGCTCAGAGTGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000621231.4
CDS CCA 90 bp CCTCAAAAATGTCTTGGGCCCTTTAGGTGGCACTGGCTGTGGAAGTaGTTTGCTGCTGTTGAACTCAATATCGTGGACTGGAGAATTAGG +
Preference number: 5 (lower is better)
Translates to: PQKCLGPFRWHWLWK*FAAVELNIVDWRIR
Trigger: CCTAATTCTCCAGTCCACGATATTGAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAGACATTTTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CAA 90 bp GTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCAAGCTCCTCAAGCATTTaGTTTAGGGACTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: VELGPQKDIPKSYPPNTSSSSSI*FRDSTS
Trigger: GGAGGTGGAGTCCCTAAACAAAATGCTTGAGGAGCT...TGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAGTTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp CAATTCTTTCAGAATGTGAAGTACCGGGCAAACCACTCCTGGCGCTGGGGATCTTGCAGAGCCAAGACCTaGTTCACTTTTCCTTACCAT +
Preference number: 5 (lower is better)
Translates to: QFFQNVKYRANHSWRWGSCRAKT*FTFPYH
Trigger: ATGGTAAGGAAAAGTGAACAAGGTCTTGGCTCTGCA...AGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGAAAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CAA 90 bp GAGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACTCCAGAGCACTTAGATaGGGAACACTCACAAACCTG +
Preference number: 5 (lower is better)
Translates to: EKLHSEQDVFGENYKARNSRALR*GTLTNL
Trigger: CAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGGA...GTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS GCA 90 bp AACGTTCTCTGGCAGCTGCTAGCTCACTTTCCACTTCTTTGTGCTTaGTTAATAGGGCCATTTCTCCCTCCTTGGCATCATCAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: NVLWQLLAHFPLLCA*LIGPFLPPWHHQAV
Trigger: AACAGCTTGATGATGCCAAGGAGGGAGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGGAAAGTGAGCTAGCAGCTGCCAGAGAACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS GCA 90 bp TGTAAACGTTCTCTGGCAGCTGCTAGCTCACTTTCCACTTCTTTGTaGTTGCTTAATAGGGCCATTTCTCCCTCCTTGGCATCATCAAGC +
Preference number: 5 (lower is better)
Translates to: CKRSLAAASSLSTSL*LLNRAISPSLASSS
Trigger: GCTTGATGATGCCAAGGAGGGAGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGGAAAGTGAGCTAGCAGCTGCCAGAGAACGTTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CCA 90 bp ACTCAAAAATGTCTTGGGCCCTTTAGGTGGCACTGGCTGTGGAAGTaGTTTGCTGCTGTTGAACTCAATATCGTGGACTGGAGAATTAGG +
Preference number: 5 (lower is better)
Translates to: TQKCLGPFRWHWLWK*FAAVELNIVDWRIR
Trigger: CCTAATTCTCCAGTCCACGATATTGAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAGACATTTTTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000621231.4
CDS GCA 90 bp CTAATCTCTTCGACTTCTCTAGACATGGTCACTATGCGTTGGACATaGTGGGCTTCTGCACAAAGTTGCATGTCCTCAACTCTGTGCTTA +
Preference number: 5 (lower is better)
Translates to: LISSTSLDMVTMRWT*WASAQSCMSSTLCL
Trigger: TAAGCACAGAGTTGAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGTGACCATGTCTAGAGAAGTCGAAGAGATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS GCA 90 bp CTGAAGCCTTTCCTGGGAGTCCTGAAGACTAGCAATAAGTCCTTCTaGAGAGCCAAGACCTTGTTCACTTTTCCTTACCATATCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LKPFLGVLKTSNKSF*RAKTLFTFPYHILE
Trigger: CTCCAAGATATGGTAAGGAAAAGTGAACAAGGTCTTGGCTCTGCAGAAGGACTTATTGCTAGTCTTCAGGACTCCCAGGAAAGGCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CCA 90 bp TTCCTTCTAATCTCTTCGACTTCTCTAGACATGGTCACTATGCGTTaGACATGCTGGGCTTCTGCACAAAGTTGCATGTCCTCAACTCTG +
Preference number: 5 (lower is better)
Translates to: FLLISSTSLDMVTMR*TCWASAQSCMSSTL
Trigger: CAGAGTTGAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGTGACCATGTCTAGAGAAGTCGAAGAGATTAGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS-3UTR CAA 90 bp GTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCATTTCCTTACCATATCTaGGAGGTGGCCAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: VELGPQKDIPKSYPPNTSFPYHI*EVANLL
Trigger: CAAGAGATTGGCCACCTCCAAGATATGGTAAGGAAA...TGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAGTTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp GTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCATGCAGAGCCAAGACCTaGTTCACTTTTCCTTACCAT +
Preference number: 5 (lower is better)
Translates to: VELGPQKDIPKSYPPNTSCRAKT*FTFPYH
Trigger: ATGGTAAGGAAAAGTGAACAAGGTCTTGGCTCTGCA...TGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAGTTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp GAGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACGCGGCATTTATTTCCTaGAGTAGCTCGTTAGTCTTA +
Preference number: 5 (lower is better)
Translates to: EKLHSEQDVFGENYKARNAAFIS*SSSLVL
Trigger: TAAGACTAACGAGCTACTCAAGGAAATAAATGCCGC...GTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CAA 90 bp GGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCACTGAGCAGGACGTCTTaGGGGAAAATTACAAGGCAC +
Preference number: 5 (lower is better)
Translates to: GRLWGKLQGTQQCVMETPLSRTS*GKITRH
Trigger: GTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAG...TGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS TCA 90 bp TGTCGTTCTTGCGTAAACTGGGCTTGCAGTTGTTGCAAAGAAGTCTaGGACTGGGAAAGCTGTATCTCCAGATTCTGTTTCAGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: CRSCVNWACSCCKEV*DWESCISRFCFSKE
Trigger: TTCCTTGCTGAAACAGAATCTGGAGATACAGCTTTCCCAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCAAGAACGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000621231.4
CDS GCA 90 bp GACTTCTCTAGACATGGTCACTATGCGTTGGACATGCTGGGCTTCTaGACAAAGTTGCATGTCCTCAACTCTGTGCTTATAAGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: DFSRHGHYALDMLGF*TKLHVLNSVLISFK
Trigger: TTTGAAGCTTATAAGCACAGAGTTGAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGTGACCATGTCTAGAGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS GCA 90 bp GTGAAGATAGGCAGAGATGGAAATTATGTTGCCGAATGCCAAGAATaGCTGGTGCTACCAGAAGCTCCACATTTAATAGAGCATCCTTGG +
Preference number: 5 (lower is better)
Translates to: VKIGRDGNYVAECQE*LVLPEAPHLIEHPW
Trigger: CCAAGGATGCTCTATTAAATGTGGAGCTTCTGGTAGCACCAGGCATTCTTGGCATTCGGCAACATAATTTCCATCTCTGCCTATCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTCATGGTCACTATGCGTaGGACATGCTGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPHGHYA*DMLGFC
Trigger: GCAGAAGCCCAGCATGTCCAACGCATAGTGACCATG...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCAGAATGTCTCTTCATCCAGACTTaGGGTTTTGCTTCGCAAAAA +
Preference number: 5 (lower is better)
Translates to: LGPQKDIPKSYPPNTSECLFIQT*GFASQK
Trigger: TTTTTGCGAAGCAAAACCCAAAGTCTGGATGAAGAG...ACATTCTGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp GAGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACCTCTTCCAATCTACTTaGCAGGTTTTTAAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: EKLHSEQDVFGENYKARNLFQST*QVFKFP
Trigger: AGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGAG...GTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CAA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAAGCCGCTGTCGTTCTaGCGTAAACTGGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHKPLSF*RKLGLQ
Trigger: CTGCAAGCCCAGTTTACGCAAGAACGACAGCGGCTT...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATAAGCCGCTGTCGTTCTaGCGTAAACTGGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNKPLSF*RKLGLQ
Trigger: CTGCAAGCCCAGTTTACGCAAGAACGACAGCGGCTT...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCATGGTCACTATGCGTaGGACATGCTGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCHGHYA*DMLGFC
Trigger: GCAGAAGCCCAGCATGTCCAACGCATAGTGACCATG...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCATGGTCACTATGCGTaGGACATGCTGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVHGHYA*DMLGFC
Trigger: GCAGAAGCCCAGCATGTCCAACGCATAGTGACCATG...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTTATCGGTTGAACCATGGTCACTATGCGTaGGACATGCTGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: VLPLTSKRIARSNCYRLNHGHYA*DMLGFC
Trigger: GCAGAAGCCCAGCATGTCCAACGCATAGTGACCATG...GTTCAACCGATAACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCATGGTCACTATGCGTaGGACATGCTGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDHGHYA*DMLGFC
Trigger: GCAGAAGCCCAGCATGTCCAACGCATAGTGACCATG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCAGAATGTTTTTTCAAACTGTACTaGAAGTTGTCCAAAGCTCCG +
Preference number: 5 (lower is better)
Translates to: LGPQKDIPKSYPPNTSECFFKLY*KLSKAP
Trigger: CGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAAA...ACATTCTGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp CAATTGTTATCGGTTGAACTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTTGCCGTCTGAAGCTTTaGGCATTTGTCAAGAAGACT +
Preference number: 5 (lower is better)
Translates to: QLLSVELGPQKDIPKSYPCRLKL*AFVKKT
Trigger: AGTCTTCTTGACAAATGCCAAAAGCTTCAGACGGCA...AGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAGTTCAACCGATAACAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp GGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCATCACTTTCCACTTCTTaGTGCTTGCTTAATAGGGCC +
Preference number: 5 (lower is better)
Translates to: GRLWGKLQGTQQCVMETPSLSTS*CLLNRA
Trigger: GGCCCTATTAAGCAAGCACAAAGAAGTGGAAAGTGA...TGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CAA 90 bp CTGGGTCCCCAAAAAGATATACCGAAGTCCTACCCTCCCAATACCTCAGAATGTCTCTTCCAATCTACTTaGCAGGTTTTTAAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: LGPQKDIPKSYPPNTSECLFQST*QVFKFP
Trigger: AGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGAG...ACATTCTGAGGTATTGGGAGGGTAGGACTTCGGTATATCTTTTTGGGGACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp CTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGTTGGCTGTATTCAACTaGTCTTCCAGTACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: LHSEQDVFGENYKARNNVLAVFN*SSSTSF
Trigger: AAAGGAAGTACTGGAAGACAAGTTGAATACAGCCAA...CACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CAA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAAGCCGCTGTCGTTCTaGCGTAAACTGGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHKPLSF*RKLGLQ
Trigger: CTGCAAGCCCAGTTTACGCAAGAACGACAGCGGCTT...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GAGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACATGCAACCTTATCTGTaGGTTAGATTCACTTCGTAT +
Preference number: 5 (lower is better)
Translates to: EKLHSEQDVFGENYKARNMQPYL*VRFTSY
Trigger: ATACGAAGTGAATCTAACCAACAGATAAGGTTGCAT...GTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CAA 90 bp GAGAAGCTTCACTCTGAGCAGGACGTCTTTGGGGAAAATTACAAGGCACGCAACCACTCACAAACCTGTTaGTTGGTGATTTATCATTCT +
Preference number: 5 (lower is better)
Translates to: EKLHSEQDVFGENYKARNHSQTC*LVIYHS
Trigger: AGAATGATAAATCACCAACAAACAGGTTTGTGAGTG...GTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAGAGTGAAGCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS GCA 90 bp GGTATCCTTTTAAGATGTGAAGATAGGCAGAGATGGAAATTATGTTaGCGAATGCCAAGAATGCCTGGTGCTACCAGAAGCTCCACATTT +
Preference number: 5 (lower is better)
Translates to: GILLRCEDRQRWKLC*RMPRMPGATRSSTF
Trigger: AAATGTGGAGCTTCTGGTAGCACCAGGCATTCTTGGCATTCGGCAACATAATTTCCATCTCTGCCTATCTTCACATCTTAAAAGGATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS CCA 90 bp TCCAATATGCCTGGTATCCTTTTAAGATGTGAAGATAGGCAGAGATaGAAATTATGTTGCCGAATGCCAAGAATGCCTGGTGCTACCAGA +
Preference number: 5 (lower is better)
Translates to: SNMPGILLRCEDRQR*KLCCRMPRMPGATR
Trigger: TCTGGTAGCACCAGGCATTCTTGGCATTCGGCAACATAATTTCCATCTCTGCCTATCTTCACATCTTAAAAGGATACCAGGCATATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATAGCTCCTCAAGCATTTaGTTTAGGGACTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNSSSSI*FRDSTS
Trigger: GGAGGTGGAGTCCCTAAACAAAATGCTTGAGGAGCT...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAAGGCACGCAACAATGTGTAATGGAAACTCCAGTAGTCATGTTCCTTGAGCTCGGTCATTTGAGTTGCTaGAAGCATTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: QGTQQCVMETPVVMFLELGHLSC*KHSNMT
Trigger: AGTCATATTGGAATGCTTCAAGCAACTCAAATGACC...GAGCTCAAGGAACATGACTACTGGAGTTTCCATTACACATTGTTGCGTGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CAA 90 bp GCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGATGTGGACAGCTTCAATaGCCATATGGTGCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: ATHYVVDSEFTYNQPDFRCGQLQ*PYGASK
Trigger: CTTGGAAGCACCATATGGCAATTGAAGCTGTCCACA...TCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATCTGGGCTTGCAGTTGTaGCAAAGAAGTCTGAGACTG +
Preference number: 5 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNLGLQL*QRSLRL
Trigger: CAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAG...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCAAGCCGCTGTCGTTCTaGCGTAAACTGGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFKPLSF*RKLGLQ
Trigger: CTGCAAGCCCAGTTTACGCAAGAACGACAGCGGCTT...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATGGACTCAAAAATGTCTaGGGCCCTTTAGGTGGCACT +
Preference number: 5 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNGLKNV*GPLGGT
Trigger: AGTGCCACCTAAAGGGCCCAAGACATTTTTGAGTCC...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000521043.5
ENST00000621231.4
CDS GCA 90 bp AGCTTCTCTTCTTCTTTCATGGCAGCAATTGTTTCTTCATGCTGTTaGCTTTCTTGTTCTAGCTCACCCTCCACATTTAATAGAGCATCC +
Preference number: 5 (lower is better)
Translates to: SFSSSFMAAIVSSCC*LSCSSSPSTFNRAS
Trigger: GGATGCTCTATTAAATGTGGAGGGTGAGCTAGAACAAGAAAGGCAACAGCATGAAGAAACAATTGCTGCCATGAAAGAAGAAGAGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000621231.4
CDS CCA 90 bp TTTCCACTTCTTTGTGCTTGCTTAATAGGGCCATTTCTCCCTCCTTaGCATCATCAAGCTGTTTTTGAAGAACCTGAACATTGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: FPLLCACLIGPFLPP*HHQAVFEEPEHCSL
Trigger: CAGAGAACAATGTTCAGGTTCTTCAAAAACAGCTTGATGATGCCAAGGAGGGAGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGGGCTTCTGCACAAAGTaGCATGTCCTCAACTCTGTG +
Preference number: 5 (lower is better)
Translates to: QEIQCIFKLERQILSHSQGFCTK*HVLNSV
Trigger: CACAGAGTTGAGGACATGCAACTTTGTGCAGAAGCC...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTAGCTCCTCAAGCATTTaGTTTAGGGACTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: VGETNTFSFTVFDIGKPISSSSI*FRDSTS
Trigger: GGAGGTGGAGTCCCTAAACAAAATGCTTGAGGAGCT...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCAGCTCCTCAAGCATTTaGTTTAGGGACTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCSSSSI*FRDSTS
Trigger: GGAGGTGGAGTCCCTAAACAAAATGCTTGAGGAGCT...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGAGCTCCTCAAGCATTTaGTTTAGGGACTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: QEIQCIFKLERQILSHSQSSSSI*FRDSTS
Trigger: GGAGGTGGAGTCCCTAAACAAAATGCTTGAGGAGCT...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GAATTTACATACAACCAACCTGACTTCAGAGCCTATACTCTAAACCATCTCTCTGCCATTTCTCCCTCCTaGGCATCATCAAGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: EFTYNQPDFRAYTLNHLSAISPS*ASSSCF
Trigger: AAAACAGCTTGATGATGCCAAGGAGGGAGAAATGGC...AGAGAGATGGTTTAGAGTATAGGCTCTGAAGTCAGGTTGGTTGTATGTAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp CACAAAGCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTCACTTTCCACTTCTTaGTGCTTGCTTAATAGGGCC +
Preference number: 5 (lower is better)
Translates to: HKATHYVVDSEFTYNQPDSLSTS*CLLNRA
Trigger: GGCCCTATTAAGCAAGCACAAAGAAGTGGAAAGTGA...GTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGCTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp AAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCAGTAGTCATGTTCCTTGTGGACAGCTTCAATaGCCATATGGTGCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: KITRHATMCNGNSSSHVPCGQLQ*PYGASK
Trigger: CTTGGAAGCACCATATGGCAATTGAAGCTGTCCACA...AGGAACATGACTACTGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CAA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCTGGGCTTGCAGTTGTaGCAAAGAAGTCTGAGACTG +
Preference number: 5 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVLGLQL*QRSLRL
Trigger: CAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAG...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGCTGGGCTTGCAGTTGTaGCAAAGAAGTCTGAGACTG +
Preference number: 5 (lower is better)
Translates to: QEIQCIFKLERQILSHSQLGLQL*QRSLRL
Trigger: CAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAG...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTTCCAGAGCACTTAGATaGGGAACACTCACAAACCTG +
Preference number: 5 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPSRALR*GTLTNL
Trigger: CAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGGA...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp AGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATGTGAAGTACTCCAGAGCACTTAGATaGGGAACACTCACAAACCTG +
Preference number: 5 (lower is better)
Translates to: SNSLYRAVPTQFFQNVKYSRALR*GTLTNL
Trigger: CAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGGA...GTACTTCACATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CAA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACGGACTCAAAAATGTCTaGGGCCCTTTAGGTGGCACT +
Preference number: 5 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDGLKNV*GPLGGT
Trigger: AGTGCCACCTAAAGGGCCCAAGACATTTTTGAGTCC...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000521043.5
ENST00000621231.4
CDS-3UTR CAA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGGGACTCAAAAATGTCTaGGGCCCTTTAGGTGGCACT +
Preference number: 5 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVGLKNV*GPLGGT
Trigger: AGTGCCACCTAAAGGGCCCAAGACATTTTTGAGTCC...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000521043.5
ENST00000621231.4
CDS-3UTR CAA 90 bp AGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATGTGAAGTACTACCTCAAAAATGTCTaGGGCCCTTTAGGTGGCACT +
Preference number: 5 (lower is better)
Translates to: SNSLYRAVPTQFFQNVKYYLKNV*GPLGGT
Trigger: AGTGCCACCTAAAGGGCCCAAGACATTTTTGAGGTA...GTACTTCACATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS GCA 90 bp TTATCCCTAATTGCATTACTGTGGACAGCTTCAATTGCCATATGGTaGTTCCAAGCTAATTCTTCCAAAGTCTTAGAATGGGCCTCGTTT +
Preference number: 5 (lower is better)
Translates to: LSLIALLWTASIAIW*FQANSSKVLEWASF
Trigger: AAACGAGGCCCATTCTAAGACTTTGGAAGAATTAGCTTGGAAGCACCATATGGCAATTGAAGCTGTCCACAGTAATGCAATTAGGGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000448815.2
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCGGCTTCTGCACAAAGTaGCATGTCCTCAACTCTGTG +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFGFCTK*HVLNSV
Trigger: CACAGAGTTGAGGACATGCAACTTTGTGCAGAAGCC...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGGCTTCTGCACAAAGTaGCATGTCCTCAACTCTGTG +
Preference number: 5 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSGFCTK*HVLNSV
Trigger: CACAGAGTTGAGGACATGCAACTTTGTGCAGAAGCC...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCAGCTCCTCAAGCATTTaGTTTAGGGACTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFSSSSI*FRDSTS
Trigger: GGAGGTGGAGTCCCTAAACAAAATGCTTGAGGAGCT...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTGCCATTTCTCCCTCCTaGGCATCATCAAGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: VGETNTFSFTVFDIGKPIAISPS*ASSSCF
Trigger: AAAACAGCTTGATGATGCCAAGGAGGGAGAAATGGC...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGGCCATTTCTCCCTCCTaGGCATCATCAAGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVAISPS*ASSSCF
Trigger: AAAACAGCTTGATGATGCCAAGGAGGGAGAAATGGC...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACGCCATTTCTCCCTCCTaGGCATCATCAAGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHAISPS*ASSSCF
Trigger: AAAACAGCTTGATGATGCCAAGGAGGGAGAAATGGC...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGATCCACTTCTTTGTGCTaGCTTAATAGGGCCATTTCT +
Preference number: 5 (lower is better)
Translates to: ATHYVVDSEFTYNQPDFRSTSLC*LNRAIS
Trigger: AGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGGA...TCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTTCACTTTCCACTTCTTaGTGCTTGCTTAATAGGGCC +
Preference number: 5 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPSLSTS*CLLNRA
Trigger: GGCCCTATTAAGCAAGCACAAAGAAGTGGAAAGTGA...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GAATTTACATACAACCAACCTGACTTCAGAGCCTATACTCTAAACCATCTCTCTAACTTCCTGGGTCATTaGAGTTGCTTGAAGCATTCC +
Preference number: 5 (lower is better)
Translates to: EFTYNQPDFRAYTLNHLSNFLGH*SCLKHS
Trigger: GGAATGCTTCAAGCAACTCAAATGACCCAGGAAGTT...AGAGAGATGGTTTAGAGTATAGGCTCTGAAGTCAGGTTGGTTGTATGTAAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp GGACGTCTTTGGGGAAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCACTTGCTGAGTTCTCTTaGCTTCATTTACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GRLWGKLQGTQQCVMETPLAEFS*LHLLSS
Trigger: AGAAGAAAGTAAATGAAGCAAAGAGAACTCAGCAAG...TGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTTCCCCAAAGACGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CAA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTGTGGACAGCTTCAATaGCCATATGGTGCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVCGQLQ*PYGASK
Trigger: CTTGGAAGCACCATATGGCAATTGAAGCTGTCCACA...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACTGTGGACAGCTTCAATaGCCATATGGTGCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDCGQLQ*PYGASK
Trigger: CTTGGAAGCACCATATGGCAATTGAAGCTGTCCACA...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATGAGGTGGCCAATCTCTaGATTGGCTGTATTCAACTT +
Preference number: 5 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNEVANL*IGCIQL
Trigger: AAGTTGAATACAGCCAATCAAGAGATTGGCCACCTC...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR CAA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTGAGGTGGCCAATCTCTaGATTGGCTGTATTCAACTT +
Preference number: 5 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPEVANL*IGCIQL
Trigger: AAGTTGAATACAGCCAATCAAGAGATTGGCCACCTC...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR CAA 90 bp CATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATGAGGTGGCCAATCTCTaGATTGGCTGTATTCAACTT +
Preference number: 5 (lower is better)
Translates to: HALSNSLYRAVPTQFFQNEVANL*IGCIQL
Trigger: AAGTTGAATACAGCCAATCAAGAGATTGGCCACCTC...ATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CAA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACTTTCCTTACCATATCTaGGAGGTGGCCAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHFPYHI*EVANLL
Trigger: CAAGAGATTGGCCACCTCCAAGATATGGTAAGGAAA...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCCTGGGCTTGCAGTTGTaGCAAAGAAGTCTGAGACTG +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFLGLQL*QRSLRL
Trigger: CAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAG...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACTGGGCTTGCAGTTGTaGCAAAGAAGTCTGAGACTG +
Preference number: 5 (lower is better)
Translates to: VHFQVGETNTFSFTVFDILGLQL*QRSLRL
Trigger: CAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAG...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATGCCGTAACAAATCAATaGCAGCTGCATGTTGATGGT +
Preference number: 5 (lower is better)
Translates to: HALSNSLYRAVPTQFFQNAVTNQ*QLHVDG
Trigger: ACCATCAACATGCAGCTGCAATTGATTTGTTACGGC...ATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CAA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTCCAGAGCACTTAGATaGGGAACACTCACAAACCTG +
Preference number: 5 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSSRALR*GTLTNL
Trigger: CAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGGA...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCCAGAGCACTTAGATaGGGAACACTCACAAACCTG +
Preference number: 5 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVSRALR*GTLTNL
Trigger: CAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGGA...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCTCCAGAGCACTTAGATaGGGAACACTCACAAACCTG +
Preference number: 5 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCSRALR*GTLTNL
Trigger: CAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGGA...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCCAGAGCACTTAGATaGGGAACACTCACAAACCTG +
Preference number: 5 (lower is better)
Translates to: QEIQCIFKLERQILSHSQSRALR*GTLTNL
Trigger: CAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGGA...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGACTCAAAAATGTCTaGGGCCCTTTAGGTGGCACT +
Preference number: 5 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIGLKNV*GPLGGT
Trigger: AGTGCCACCTAAAGGGCCCAAGACATTTTTGAGTCC...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000521043.5
ENST00000621231.4
CDS-3UTR CAA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATCCTTGGCCGTCCTGGTaGATTAGTCATTACACATTT +
Preference number: 5 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNPWPSW*ISHYTF
Trigger: AAATGTGTAATGACTAATCAACCAGGACGGCCAAGG...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352896.9
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCCTGAGCAGGACGTCTTaGGGGAAAATTACAAGGCAC +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFLSRTS*GKITRH
Trigger: GTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAG...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368472.6
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CAA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCTGAGCAGGACGTCTTaGGGGAAAATTACAAGGCAC +
Preference number: 5 (lower is better)
Translates to: EIQCIFKLERQILSHSQCLSRTS*GKITRH
Trigger: GTGCCTTGTAATTTTCCCCAAAGACGTCCTGCTCAG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368472.6
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CAA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACCTCAAAAATGTCTaGGGCCCTTTAGGTGGCACT +
Preference number: 5 (lower is better)
Translates to: QCIFKLERQILSHSQCLTYLKNV*GPLGGT
Trigger: AGTGCCACCTAAAGGGCCCAAGACATTTTTGAGGTA...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS TCA 90 bp TTCCAAGCTAATTCTTCCAAAGTCTTAGAATGGGCCTCGTTTAATTaGGTCACCTCCTCTTCCAATCTACTTTGCAGGTTTTTAAGTTCC +
Preference number: 5 (lower is better)
Translates to: FQANSSKVLEWASFN*VTSSSNLLCRFLSS
Trigger: GGAACTTAAAAACCTGCAAAGTAGATTGGAAGAGGAGGTGACTCAATTAAACGAGGCCCATTCTAAGACTTTGGAAGAATTAGCTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000448815.2
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS-3UTR CAA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACTGCCGTCTGAAGCTTTaGGCATTTGTCAAGAAGACT +
Preference number: 5 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDCRLKL*AFVKKT
Trigger: AGTCTTCTTGACAAATGCCAAAAGCTTCAGACGGCA...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTGCCGTCTGAAGCTTTaGGCATTTGTCAAGAAGACT +
Preference number: 5 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSCRLKL*AFVKKT
Trigger: AGTCTTCTTGACAAATGCCAAAAGCTTCAGACGGCA...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTGCCGTCTGAAGCTTTaGGCATTTGTCAAGAAGACT +
Preference number: 5 (lower is better)
Translates to: VGETNTFSFTVFDIGKPICRLKL*AFVKKT
Trigger: AGTCTTCTTGACAAATGCCAAAAGCTTCAGACGGCA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCCATTTCTCCCTCCTaGGCATCATCAAGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSAISPS*ASSSCF
Trigger: AAAACAGCTTGATGATGCCAAGGAGGGAGAAATGGC...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTCACTTTCCACTTCTTaGTGCTTGCTTAATAGGGCC +
Preference number: 5 (lower is better)
Translates to: VGETNTFSFTVFDIGKPISLSTS*CLLNRA
Trigger: GGCCCTATTAAGCAAGCACAAAGAAGTGGAAAGTGA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCACTTTCCACTTCTTaGTGCTTGCTTAATAGGGCC +
Preference number: 5 (lower is better)
Translates to: QEIQCIFKLERQILSHSQSLSTS*CLLNRA
Trigger: GGCCCTATTAAGCAAGCACAAAGAAGTGGAAAGTGA...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CACAAAGCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACGGTCATTTGAGTTGCTaGAAGCATTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: HKATHYVVDSEFTYNQPDGHLSC*KHSNMT
Trigger: AGTCATATTGGAATGCTTCAAGCAACTCAAATGACC...GTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGCTTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGAACTTCCTGGGTCATTaGAGTTGCTTGAAGCATTCC +
Preference number: 5 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVNFLGH*SCLKHS
Trigger: GGAATGCTTCAAGCAACTCAAATGACCCAGGAAGTT...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGAACTTCCTGGGTCATTaGAGTTGCTTGAAGCATTCC +
Preference number: 5 (lower is better)
Translates to: QEIQCIFKLERQILSHSQNFLGH*SCLKHS
Trigger: GGAATGCTTCAAGCAACTCAAATGACCCAGGAAGTT...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTAACTTCCTGGGTCATTaGAGTTGCTTGAAGCATTCC +
Preference number: 5 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSNFLGH*SCLKHS
Trigger: GGAATGCTTCAAGCAACTCAAATGACCCAGGAAGTT...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTAACTTCCTGGGTCATTaGAGTTGCTTGAAGCATTCC +
Preference number: 5 (lower is better)
Translates to: VGETNTFSFTVFDIGKPINFLGH*SCLKHS
Trigger: GGAATGCTTCAAGCAACTCAAATGACCCAGGAAGTT...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTCTCTTCATCCAGACTTaGGGTTTTGCTTCGCAAAAA +
Preference number: 5 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPLFIQT*GFASQK
Trigger: TTTTTGCGAAGCAAAACCCAAAGTCTGGATGAAGAG...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGAATATGTGGACAGCTTCAATaGCCATATGGTGCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LDMLPLLRLTYLYNVTRICGQLQ*PYGASK
Trigger: CTTGGAAGCACCATATGGCAATTGAAGCTGTCCACA...TATTCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR CAA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTGTGGACAGCTTCAATaGCCATATGGTGCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSCGQLQ*PYGASK
Trigger: CTTGGAAGCACCATATGGCAATTGAAGCTGTCCACA...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGATTGGCTGTATTCAACTaGTCTTCCAGTACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: ATHYVVDSEFTYNQPDFRLAVFN*SSSTSF
Trigger: AAAGGAAGTACTGGAAGACAAGTTGAATACAGCCAA...TCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGGAGGTGGCCAATCTCTaGATTGGCTGTATTCAACTT +
Preference number: 5 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVEVANL*IGCIQL
Trigger: AAGTTGAATACAGCCAATCAAGAGATTGGCCACCTC...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR CAA 90 bp ATCTCTCTGAAGGAAAAGATTAAGAACTTCCTGGGTACTATACACCCAGTTTTAGAGGTGGCCAATCTCTaGATTGGCTGTATTCAACTT +
Preference number: 5 (lower is better)
Translates to: ISLKEKIKNFLGTIHPVLEVANL*IGCIQL
Trigger: AAGTTGAATACAGCCAATCAAGAGATTGGCCACCTC...TAAAACTGGGTGTATAGTACCCAGGAAGTTCTTAATCTTTTCCTTCAGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTTCCTTACCATATCTaGGAGGTGGCCAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: QEIQCIFKLERQILSHSQFPYHI*EVANLL
Trigger: CAAGAGATTGGCCACCTCCAAGATATGGTAAGGAAA...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR CAA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTTCCTTACCATATCTaGGAGGTGGCCAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSFPYHI*EVANLL
Trigger: CAAGAGATTGGCCACCTCCAAGATATGGTAAGGAAA...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR CAA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCAGAGCCAAGACCTaGTTCACTTTTCCTTACCAT +
Preference number: 5 (lower is better)
Translates to: QEIQCIFKLERQILSHSQCRAKT*FTFPYH
Trigger: ATGGTAAGGAAAAGTGAACAAGGTCTTGGCTCTGCA...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTTTAATAGAGCATCCTaGGTCTCCTTTAGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNFNRAS*VSFRLS
Trigger: AGACAGCCTAAAGGAGACCAAGGATGCTCTATTAAA...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTTTTAATAGAGCATCCTaGGTCTCCTTTAGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPFNRAS*VSFRLS
Trigger: AGACAGCCTAAAGGAGACCAAGGATGCTCTATTAAA...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GAATTTACATACAACCAACCTGACTTCAGAGCCTATACTCTAAACCATCTCTCTTTTAATAGAGCATCCTaGGTCTCCTTTAGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: EFTYNQPDFRAYTLNHLSFNRAS*VSFRLS
Trigger: AGACAGCCTAAAGGAGACCAAGGATGCTCTATTAAA...AGAGAGATGGTTTAGAGTATAGGCTCTGAAGTCAGGTTGGTTGTATGTAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTGCCATTTTGTCCACTTaGAGCTTCTCTTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPAILST*SFSSSF
Trigger: GAAAGAAGAAGAGAAGCTCAAAGTGGACAAAATGGC...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACGCCATTTTGTCCACTTaGAGCTTCTCTTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHAILST*SFSSSF
Trigger: GAAAGAAGAAGAGAAGCTCAAAGTGGACAAAATGGC...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp AGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTTCAGAATGTGAAGTACTCTGCCATGAATCTCTaGCTGCATTTTTCTCTCGAT +
Preference number: 5 (lower is better)
Translates to: SNSLYRAVPTQFFQNVKYSAMNL*LHFSLD
Trigger: ATCGAGAGAAAAATGCAGCAAGAGATTCATGGCAGA...GTACTTCACATTCTGAAAGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475529.7
CDS-3UTR CAA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTTCCTCTTCCATAGTTaGAAATGCAAGGACATGTGC +
Preference number: 5 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNFLFHS*KCKDMC
Trigger: GCACATGTCCTTGCATTTCAAACTATGGAAGAGGAA...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACAGCCGTAACAAATCAATaGCAGCTGCATGTTGATGGT +
Preference number: 5 (lower is better)
Translates to: QCIFKLERQILSHSQCLTAVTNQ*QLHVDG
Trigger: ACCATCAACATGCAGCTGCAATTGATTTGTTACGGC...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTGCCGTAACAAATCAATaGCAGCTGCATGTTGATGGT +
Preference number: 5 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSAVTNQ*QLHVDG
Trigger: ACCATCAACATGCAGCTGCAATTGATTTGTTACGGC...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACGCGGCATTTATTTCCTaGAGTAGCTCGTTAGTCTTA +
Preference number: 5 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHAAFIS*SSSLVL
Trigger: TAAGACTAACGAGCTACTCAAGGAAATAAATGCCGC...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000368472.6
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATTCCCATGCCTTCTCTaGGCTGATCCAAATTCTTTG +
Preference number: 5 (lower is better)
Translates to: QCIFKLERQILSHSQCLTFPCLL*ADPNSL
Trigger: CAAAGAATTTGGATCAGCCAAGAGAAGGCATGGGAA...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352896.9
CDS-3UTR CAA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAAAGCATATATTACCTaGGTGAGCTGGGCGATTTTC +
Preference number: 5 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHKAYIT*VSWAIF
Trigger: GAAAATCGCCCAGCTCACCAAGGTAATATATGCTTT...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR CAA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACTTTTTCAAACTGTACTaGAAGTTGTCCAAAGCTCCG +
Preference number: 5 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHFFKLY*KLSKAP
Trigger: CGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAAA...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTCCACTTCTTTGTGCTaGCTTAATAGGGCCATTTCT +
Preference number: 5 (lower is better)
Translates to: VGETNTFSFTVFDIGKPISTSLC*LNRAIS
Trigger: AGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGGA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTTCCACTTCTTTGTGCTaGCTTAATAGGGCCATTTCT +
Preference number: 5 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSSTSLC*LNRAIS
Trigger: AGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGGA...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCTCCACTTCTTTGTGCTaGCTTAATAGGGCCATTTCT +
Preference number: 5 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCSTSLC*LNRAIS
Trigger: AGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGGA...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTCACTTTCCACTTCTTaGTGCTTGCTTAATAGGGCC +
Preference number: 5 (lower is better)
Translates to: EIQCIFKLERQILSHSQCSLSTS*CLLNRA
Trigger: GGCCCTATTAAGCAAGCACAAAGAAGTGGAAAGTGA...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp TATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTCTCCTGGGTCATTTGAGTaGCTTGAAGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: YKVMLLVTVYTELCQHNSPGSFE*LEAFQY
Trigger: ATATTGGAATGCTTCAAGCAACTCAAATGACCCAGG...AGAATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCCTGGGTCATTTGAGTaGCTTGAAGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCPGSFE*LEAFQY
Trigger: ATATTGGAATGCTTCAAGCAACTCAAATGACCCAGG...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ATCTCTCTGAAGGAAAAGATTAAGAACTTCCTGGGTACTATACACCCAGTTTTACCTGGGTCATTTGAGTaGCTTGAAGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: ISLKEKIKNFLGTIHPVLPGSFE*LEAFQY
Trigger: ATATTGGAATGCTTCAAGCAACTCAAATGACCCAGG...TAAAACTGGGTGTATAGTACCCAGGAAGTTCTTAATCTTTTCCTTCAGAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTAACTTCCTGGGTCATTaGAGTTGCTTGAAGCATTCC +
Preference number: 5 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSNFLGH*SCLKHS
Trigger: GGAATGCTTCAAGCAACTCAAATGACCCAGGAAGTT...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCTCTTCATCCAGACTTaGGGTTTTGCTTCGCAAAAA +
Preference number: 5 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVLFIQT*GFASQK
Trigger: TTTTTGCGAAGCAAAACCCAAAGTCTGGATGAAGAG...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCTCTTCATCCAGACTTaGGGTTTTGCTTCGCAAAAA +
Preference number: 5 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDLFIQT*GFASQK
Trigger: TTTTTGCGAAGCAAAACCCAAAGTCTGGATGAAGAG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CACAAAGCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACCTTGCTGAGTTCTCTTaGCTTCATTTACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: HKATHYVVDSEFTYNQPDLAEFS*LHLLSS
Trigger: AGAAGAAAGTAAATGAAGCAAAGAGAACTCAGCAAG...GTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGCTTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATCTCTTCCAATCTACTTaGCAGGTTTTTAAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNLFQST*QVFKFP
Trigger: AGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGAG...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACAATTTGGCTGTATTCAACTaGTCTTCCAGTACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: LYKVMLLVTVYTELCQHNLAVFN*SSSTSF
Trigger: AAAGGAAGTACTGGAAGACAAGTTGAATACAGCCAA...ATTGTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTTTCCTTACCATATCTaGGAGGTGGCCAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFFPYHI*EVANLL
Trigger: CAAGAGATTGGCCACCTCCAAGATATGGTAAGGAAA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR CAA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTGCAGAGCCAAGACCTaGTTCACTTTTCCTTACCAT +
Preference number: 5 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSCRAKT*FTFPYH
Trigger: ATGGTAAGGAAAAGTGAACAAGGTCTTGGCTCTGCA...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTGCAGAGCCAAGACCTaGTTCACTTTTCCTTACCAT +
Preference number: 5 (lower is better)
Translates to: EIQCIFKLERQILSHSQCCRAKT*FTFPYH
Trigger: ATGGTAAGGAAAAGTGAACAAGGTCTTGGCTCTGCA...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTAATAGAGCATCCTaGGTCTCCTTTAGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVFNRAS*VSFRLS
Trigger: AGACAGCCTAAAGGAGACCAAGGATGCTCTATTAAA...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTTAATAGAGCATCCTaGGTCTCCTTTAGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: QEIQCIFKLERQILSHSQFNRAS*VSFRLS
Trigger: AGACAGCCTAAAGGAGACCAAGGATGCTCTATTAAA...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCGCCATTTTGTCCACTTaGAGCTTCTCTTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCAILST*SFSSSF
Trigger: GAAAGAAGAAGAGAAGCTCAAAGTGGACAAAATGGC...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACGCCATTTTGTCCACTTaGAGCTTCTCTTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHAILST*SFSSSF
Trigger: GAAAGAAGAAGAGAAGCTCAAAGTGGACAAAATGGC...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACTCTGCCATGAATCTCTaGCTGCATTTTTCTCTCGAT +
Preference number: 5 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDSAMNL*LHFSLD
Trigger: ATCGAGAGAAAAATGCAGCAAGAGATTCATGGCAGA...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACTCTGCCATGAATCTCTaGCTGCATTTTTCTCTCGAT +
Preference number: 5 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHSAMNL*LHFSLD
Trigger: ATCGAGAGAAAAATGCAGCAAGAGATTCATGGCAGA...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTTCTGCCATGAATCTCTaGCTGCATTTTTCTCTCGAT +
Preference number: 5 (lower is better)
Translates to: VGETNTFSFTVFDIGKPISAMNL*LHFSLD
Trigger: ATCGAGAGAAAAATGCAGCAAGAGATTCATGGCAGA...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACTTCCTCTTCCATAGTTaGAAATGCAAGGACATGTGC +
Preference number: 5 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHFLFHS*KCKDMC
Trigger: GCACATGTCCTTGCATTTCAAACTATGGAAGAGGAA...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCTTCCTCTTCCATAGTTaGAAATGCAAGGACATGTGC +
Preference number: 5 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCFLFHS*KCKDMC
Trigger: GCACATGTCCTTGCATTTCAAACTATGGAAGAGGAA...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCGCCGTAACAAATCAATaGCAGCTGCATGTTGATGGT +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFAVTNQ*QLHVDG
Trigger: ACCATCAACATGCAGCTGCAATTGATTTGTTACGGC...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTATTGCGGCATTTATTTCCTaGAGTAGCTCGTTAGTCTTA +
Preference number: 5 (lower is better)
Translates to: VGETNTFSFTVFDIGKPIAAFIS*SSSLVL
Trigger: TAAGACTAACGAGCTACTCAAGGAAATAAATGCCGC...AATAGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000368472.6
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGGCGGCATTTATTTCCTaGAGTAGCTCGTTAGTCTTA +
Preference number: 5 (lower is better)
Translates to: QEIQCIFKLERQILSHSQAAFIS*SSSLVL
Trigger: TAAGACTAACGAGCTACTCAAGGAAATAAATGCCGC...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000368472.6
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp GCTACACACTATGTGGTGGATTCAGAATTTACATACAACCAACCTGACTTCAGAAGACAATCTAAATCTTaGCTGTGCTTCATAAGAGTG +
Preference number: 5 (lower is better)
Translates to: ATHYVVDSEFTYNQPDFRRQSKS*LCFIRV
Trigger: CACTCTTATGAAGCACAGCAAAGATTTAGATTGTCT...TCTGAAGTCAGGTTGGTTGTATGTAAATTCTGAATCCACCACATAGTGTGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCAAAGCATATATTACCTaGGTGAGCTGGGCGATTTTC +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFKAYIT*VSWAIF
Trigger: GAAAATCGCCCAGCTCACCAAGGTAATATATGCTTT...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATTTTTCAAACTGTACTaGAAGTTGTCCAAAGCTCCG +
Preference number: 5 (lower is better)
Translates to: QCIFKLERQILSHSQCLTFFKLY*KLSKAP
Trigger: CGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAAA...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCTTTTTCAAACTGTACTaGAAGTTGTCCAAAGCTCCG +
Preference number: 5 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCFFKLY*KLSKAP
Trigger: CGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAAA...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGAAAGCCTTCCAATGCCAATCGTTaGTCTTTTTCAAACTGTACT +
Preference number: 5 (lower is better)
Translates to: QVGETNTFSFTVFDIGKPSNANR*SFSNCT
Trigger: AGTACAGTTTGAAAAAGACAAACGATTGGCATTGGA...AGGCTTTCCTATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp AATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCAACACTCCAATGCCAATCGTTaGTCTTTTTCAAACTGTACT +
Preference number: 5 (lower is better)
Translates to: NLYKVMLLVTVYTELCQHSNANR*SFSNCT
Trigger: AGTACAGTTTGAAAAAGACAAACGATTGGCATTGGA...GTGTTGGCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTCCACTTCTTTGTGCTaGCTTAATAGGGCCATTTCT +
Preference number: 5 (lower is better)
Translates to: EIQCIFKLERQILSHSQCSTSLC*LNRAIS
Trigger: AGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGGA...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACGGTCATTTGAGTTGCTaGAAGCATTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHGHLSC*KHSNMT
Trigger: AGTCATATTGGAATGCTTCAAGCAACTCAAATGACC...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCGGTCATTTGAGTTGCTaGAAGCATTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCGHLSC*KHSNMT
Trigger: AGTCATATTGGAATGCTTCAAGCAACTCAAATGACC...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCCCTGGGTCATTTGAGTaGCTTGAAGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFPGSFE*LEAFQY
Trigger: ATATTGGAATGCTTCAAGCAACTCAAATGACCCAGG...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCCTGGGTCATTTGAGTaGCTTGAAGCATTCCAATAT +
Preference number: 5 (lower is better)
Translates to: EIQCIFKLERQILSHSQCPGSFE*LEAFQY
Trigger: ATATTGGAATGCTTCAAGCAACTCAAATGACCCAGG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ATTCTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGACTCTTCATCCAGACTTaGGGTTTTGCTTCGCAAAAA +
Preference number: 5 (lower is better)
Translates to: ILDMLPLLRLTYLYNVTRLFIQT*GFASQK
Trigger: TTTTTGCGAAGCAAAACCCAAAGTCTGGATGAAGAG...TCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR CAA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACCTCTTCCAATCTACTTaGCAGGTTTTTAAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDLFQST*QVFKFP
Trigger: AGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGAG...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCTCTTCCAATCTACTTaGCAGGTTTTTAAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVLFQST*QVFKFP
Trigger: AGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGAG...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATTGGCTGTATTCAACTaGTCTTCCAGTACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: QCIFKLERQILSHSQCLTLAVFN*SSSTSF
Trigger: AAAGGAAGTACTGGAAGACAAGTTGAATACAGCCAA...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR CAA 90 bp CAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTGGCTGTATTCAACTaGTCTTCCAGTACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: QEIQCIFKLERQILSHSQLAVFN*SSSTSF
Trigger: AAAGGAAGTACTGGAAGACAAGTTGAATACAGCCAA...CTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
CDS-3UTR CAA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCCATTTTGTCCACTTaGAGCTTCTCTTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSAILST*SFSSSF
Trigger: GAAAGAAGAAGAGAAGCTCAAAGTGGACAAAATGGC...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTCTGCCATGAATCTCTaGCTGCATTTTTCTCTCGAT +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFSAMNL*LHFSLD
Trigger: ATCGAGAGAAAAATGCAGCAAGAGATTCATGGCAGA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATATTCCTCTTCCATAGTTaGAAATGCAAGGACATGTGC +
Preference number: 5 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIFLFHS*KCKDMC
Trigger: GCACATGTCCTTGCATTTCAAACTATGGAAGAGGAA...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTCCTCTTCCATAGTTaGAAATGCAAGGACATGTGC +
Preference number: 5 (lower is better)
Translates to: EIQCIFKLERQILSHSQCFLFHS*KCKDMC
Trigger: GCACATGTCCTTGCATTTCAAACTATGGAAGAGGAA...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTGCGGCATTTATTTCCTaGAGTAGCTCGTTAGTCTTA +
Preference number: 5 (lower is better)
Translates to: EIQCIFKLERQILSHSQCAAFIS*SSSLVL
Trigger: TAAGACTAACGAGCTACTCAAGGAAATAAATGCCGC...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000368472.6
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp AAAATTACAAGGCACGCAACAATGTGTAATGGAAACTCCAGTAGTCATGTTCCTCACTCACAAACCTGTTaGTTGGTGATTTATCATTCT +
Preference number: 5 (lower is better)
Translates to: KITRHATMCNGNSSSHVPHSQTC*LVIYHS
Trigger: AGAATGATAAATCACCAACAAACAGGTTTGTGAGTG...AGGAACATGACTACTGGAGTTTCCATTACACATTGTTGCGTGCCTTGTAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475529.7
ENST00000617072.4
CDS-3UTR CAA 90 bp ACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACGAGCAGGACTGTTTGTaGGTGATTTATCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: TVHFQVGETNTFSFTVFDEQDCL*VIYHSS
Trigger: AGAAGAATGATAAATCACCAACAAACAGTCCTGCTC...GTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481884.6
ENST00000517987.5
CDS-3UTR CAA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCGAGCAGGACTGTTTGTaGGTGATTTATCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCEQDCL*VIYHSS
Trigger: AGAAGAATGATAAATCACCAACAAACAGTCCTGCTC...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481884.6
ENST00000517987.5
CDS-3UTR CAA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACTCTGAGCAGGACTGTTaGTTGGTGATTTATCATTCT +
Preference number: 5 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHSEQDC*LVIYHS
Trigger: AGAATGATAAATCACCAACAAACAGTCCTGCTCAGA...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481884.6
ENST00000517987.5
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTTTCCTTACCATATCTaGGAGGTGGCCAATCTCTTT +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFFPYHI*EVANLF
Trigger: AAAGAGATTGGCCACCTCCAAGATATGGTAAGGAAA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621231.4
CDS GCA 90 bp AAGTATCAAGCTCACGTTCATAAAAGGACTGAGCTTTATTCAACTTaGCTTCATAATCCTCAATTAGTTTCTTCCGTTCAAGTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: KYQAHVHKRTELYST*LHNPQLVSSVQVLA
Trigger: AGCTAAGACTTGAACGGAAGAAACTAATTGAGGATTATGAAGGCAAGTTGAATAAAGCTCAGTCCTTTTATGAACGTGAGCTTGATACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CCA 90 bp ATCTATAACATAGGCAACAGGTCTAAAGAATTCTTGCCTCTTGATTaGCTGTATTCAACTTGTCTTCCAGTACTTCCTTTAGGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: IYNIGNRSKEFLPLD*LYSTCLPVLPLGFL
Trigger: TAGAAAACCTAAAGGAAGTACTGGAAGACAAGTTGAATACAGCCAATCAAGAGGCAAGAATTCTTTAGACCTGTTGCCTATGTTATAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR CAA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTTTTTTCAAACTGTACTaGAAGTTGTCCAAAGCTCCG +
Preference number: 5 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSFFKLY*KLSKAP
Trigger: CGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAAA...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTTTTTCAAACTGTACTaGAAGTTGTCCAAAGCTCCG +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFFFKLY*KLSKAP
Trigger: CGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAAA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCTCCAATGCCAATCGTTaGTCTTTTTCAAACTGTACT +
Preference number: 5 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCSNANR*SFSNCT
Trigger: AGTACAGTTTGAAAAAGACAAACGATTGGCATTGGA...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACTCCAATGCCAATCGTTaGTCTTTTTCAAACTGTACT +
Preference number: 5 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHSNANR*SFSNCT
Trigger: AGTACAGTTTGAAAAAGACAAACGATTGGCATTGGA...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTGGTCATTTGAGTTGCTaGAAGCATTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: EIQCIFKLERQILSHSQCGHLSC*KHSNMT
Trigger: AGTCATATTGGAATGCTTCAAGCAACTCAAATGACC...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATAGGTCATTTGAGTTGCTaGAAGCATTCCAATATGACT +
Preference number: 5 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIGHLSC*KHSNMT
Trigger: AGTCATATTGGAATGCTTCAAGCAACTCAAATGACC...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACACTTGCTGAGTTCTCTTaGCTTCATTTACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: QCIFKLERQILSHSQCLTLAEFS*LHLLSS
Trigger: AGAAGAAAGTAAATGAAGCAAAGAGAACTCAGCAAG...TGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCTTGCTGAGTTCTCTTaGCTTCATTTACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHLAEFS*LHLLSS
Trigger: AGAAGAAAGTAAATGAAGCAAAGAGAACTCAGCAAG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp GATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGAATAAGTCTCTTCCAATCTACTTaGCAGGTTTTTAAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: DMLPLLRLTYLYNVTRISLFQST*QVFKFP
Trigger: AGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGAG...ACTTATTCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR CAA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCTCTTCCAATCTACTTaGCAGGTTTTTAAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSLFQST*QVFKFP
Trigger: AGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGAG...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ATTCTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGATTGGCTGTATTCAACTaGTCTTCCAGTACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: ILDMLPLLRLTYLYNVTRLAVFN*SSSTSF
Trigger: AAAGGAAGTACTGGAAGACAAGTTGAATACAGCCAA...TCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR CAA 90 bp CACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACCACTCACAAACCTGTTaGTTGGTGATTTATCATTCT +
Preference number: 5 (lower is better)
Translates to: HRKYSAFSSWRDKYFLIHHSQTC*LVIYHS
Trigger: AGAATGATAAATCACCAACAAACAGGTTTGTGAGTG...GTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp CATAACAATCTGTATAAAGTCATGCTCTTAGTAACAGTCTATACAGAGCTGTGCCACTCACAAACCTGTTaGTTGGTGATTTATCATTCT +
Preference number: 5 (lower is better)
Translates to: HNNLYKVMLLVTVYTELCHSQTC*LVIYHS
Trigger: AGAATGATAAATCACCAACAAACAGGTTTGTGAGTG...GCACAGCTCTGTATAGACTGTTACTAAGAGCATGACTTTATACAGATTGTTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp GGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGCACTCACAAACCTGTTaGTTGGTGATTTATCATTCT +
Preference number: 5 (lower is better)
Translates to: GNTVHFQVGETNTFSFTVHSQTC*LVIYHS
Trigger: AGAATGATAAATCACCAACAAACAGGTTTGTGAGTG...CACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATATCTGAGCAGGACTGTTaGTTGGTGATTTATCATTCT +
Preference number: 5 (lower is better)
Translates to: VHFQVGETNTFSFTVFDISEQDC*LVIYHS
Trigger: AGAATGATAAATCACCAACAAACAGTCCTGCTCAGA...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481884.6
ENST00000517987.5
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCTCCAATGCCAATCGTTaGTCTTTTTCAAACTGTACT +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFSNANR*SFSNCT
Trigger: AGTACAGTTTGAAAAAGACAAACGATTGGCATTGGA...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp CTGTATATGAGAGTTCTACCTCTTACTAGTAAAAGAATTGCACGTTCCAATTGTTCCAATGCCAATCGTTaGTCTTTTTCAAACTGTACT +
Preference number: 5 (lower is better)
Translates to: LYMRVLPLTSKRIARSNCSNANR*SFSNCT
Trigger: AGTACAGTTTGAAAAAGACAAACGATTGGCATTGGA...ACAATTGGAACGTGCAATTCTTTTACTAGTAAGAGGTAGAACTCTCATATACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS-3UTR CAA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTCTTGCTGAGTTCTCTTaGCTTCATTTACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: EIQCIFKLERQILSHSQCLAEFS*LHLLSS
Trigger: AGAAGAAAGTAAATGAAGCAAAGAGAACTCAGCAAG...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp ATTCTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGACTTGCTGAGTTCTCTTaGCTTCATTTACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: ILDMLPLLRLTYLYNVTRLAEFS*LHLLSS
Trigger: AGAAGAAAGTAAATGAAGCAAAGAGAACTCAGCAAG...TCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS-3UTR CAA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACTTGCTGAGTTCTCTTaGCTTCATTTACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VHFQVGETNTFSFTVFDILAEFS*LHLLSS
Trigger: AGAAGAAAGTAAATGAAGCAAAGAGAACTCAGCAAG...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000621231.4
CDS-3UTR CAA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTATGCAACCTTATCTGTaGGTTAGATTCACTTCGTAT +
Preference number: 5 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSMQPYL*VRFTSY
Trigger: ATACGAAGTGAATCTAACCAACAGATAAGGTTGCAT...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp GAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTATGCAACCTTATCTGTaGGTTAGATTCACTTCGTAT +
Preference number: 5 (lower is better)
Translates to: EIQCIFKLERQILSHSQCMQPYL*VRFTSY
Trigger: ATACGAAGTGAATCTAACCAACAGATAAGGTTGCAT...ACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp ATCACAGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCATGCAACCTTATCTGTaGGTTAGATTCACTTCGTAT +
Preference number: 5 (lower is better)
Translates to: ITGNTVHFQVGETNTFSFMQPYL*VRFTSY
Trigger: ATACGAAGTGAATCTAACCAACAGATAAGGTTGCAT...GAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCTGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338891.12
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp GTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTGTTTGACATACACTCACAAACCTGTTaGTTGGTGATTTATCATTCT +
Preference number: 5 (lower is better)
Translates to: VHFQVGETNTFSFTVFDIHSQTC*LVIYHS
Trigger: AGAATGATAAATCACCAACAAACAGGTTTGTGAGTG...TATGTCAAACACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp AGGAAATACAGTGCATTTTCAAGTTGGAGAGACAAATACTTTCTCATTCACAGTCACTCACAAACCTGTTaGTTGGTGATTTATCATTCT +
Preference number: 5 (lower is better)
Translates to: RKYSAFSSWRDKYFLIHSHSQTC*LVIYHS
Trigger: AGAATGATAAATCACCAACAAACAGGTTTGTGAGTG...ACTGTGAATGAGAAAGTATTTGTCTCTCCAACTTGAAAATGCACTGTATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS-3UTR CAA 90 bp CTAGATATGTTACCTTTACTGAGACTTACCTACCTATACAATGTCACCAGAATAAAGAATTCTTGCCTCTaGATTGGCTGTATTCAACTT +
Preference number: 5 (lower is better)
Translates to: LDMLPLLRLTYLYNVTRIKNSCL*IGCIQL
Trigger: AAGTTGAATACAGCCAATCAAGAGGCAAGAATTCTT...TATTCTGGTGACATTGTATAGGTAGGTAAGTCTCAGTAAAGGTAACATATCTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS CCA 72 bp CCGGGGCACCTGTCCCCGCGGGTGGAGGCAGGCCCGTaGAGCAACGACGCCCGGGAGGCAAGAGTCGCGGCG +
Preference number: 6 (lower is better)
Translates to: PGHLSPRVEAGP*SNDAREARVAA
Trigger: CGCCGCGACTCTTGCCTCCCGGGCGTCGTTGCTCCACGGGCCTGCCTCCACCCGCGGGGACAGGTGCCCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338891.12
ENST00000621231.4
CDS CCA 72 bp CAGCCAGCTGTGCGGTGGCCGGCGAGGGCGCGAATTTaGCCGCCGAGCCGCCGTAATAGTGCTGCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: QPAVRWPARARI*PPSRRNSAAAS
Trigger: GCTGGCAGCAGCACTATTACGGCGGCTCGGCGGCCAAATTCGCGCCCTCGCCGGCCACCGCACAGCTGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338891.12
ENST00000521531.5
ENST00000621231.4
CDS GCA 72 bp CCGCCGAGCCGCCGTAATAGTGCTGCTGCCAGCTCATaGCCGGGGTCGCCATCTTCCCAACAGACCCCAGCC +
Preference number: 6 (lower is better)
Translates to: PPSRRNSAAASS*PGSPSSQQTPA
Trigger: GGCTGGGGTCTGTTGGGAAGATGGCGACCCCGGGCATGAGCTGGCAGCAGCACTATTACGGCGGCTCGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338891.12
ENST00000521531.5
ENST00000621231.4
CDS GCA 72 bp TGCTCATTTTCAGGTGCATCTCCTGGCTGTAGTCCATaGTGTGCCCAGCCAGCTGTGCGGTGGCCGGCGAGG +
Preference number: 6 (lower is better)
Translates to: CSFSGASPGCSP*CAQPAVRWPAR
Trigger: CCTCGCCGGCCACCGCACAGCTGGCTGGGCACAGCATGGACTACAGCCAGGAGATGCACCTGAAAATGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338891.12
ENST00000521531.5
ENST00000621231.4
CDS CCA 72 bp CCACATGCGTCCTCGTGTGTGCAGGGCCCCAAGAAGTaGCTCTTCCCCAAGAAGAGAGGCAAGCCCAATCCA +
Preference number: 6 (lower is better)
Translates to: PHASSCVQGPKK*LFPKKRGKPNP
Trigger: TGGATTGGGCTTGCCTCTCTTCTTGGGGAAGAGCCACTTCTTGGGGCCCTGCACACACGAGGACGCATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS GCA 72 bp AGCAGAACGGGTGTCGATTTACAGACCCTTTCCACATaGGTCCTCGTGTGTGCAGGGCCCCAAGAAGTGGCT +
Preference number: 6 (lower is better)
Translates to: SRTGVDLQTLST*VLVCAGPQEVA
Trigger: AGCCACTTCTTGGGGCCCTGCACACACGAGGACGCATGTGGAAAGGGTCTGTAAATCGACACCCGTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS CCA 72 bp TGTCTTGGGCCCTTTAGGTGGCACTGGCTGTGGAAGTaGTTTGCTGCTGTTGAACTCAATATCGTGGACTGG +
Preference number: 6 (lower is better)
Translates to: CLGPFRWHWLWK*FAAVELNIVDW
Trigger: CCAGTCCACGATATTGAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000617072.4
ENST00000621231.4
CDS CAA 72 bp TTGGGCCCTTTAGGTGGCACTGGCTGTGGAAGTGGTTaGCTGCTGTTGAACTCAATATCGTGGACTGGAGAA +
Preference number: 6 (lower is better)
Translates to: LGPLGGTGCGSG*LLLNSISWTGE
Trigger: TTCTCCAGTCCACGATATTGAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000617072.4
ENST00000621231.4
CDS CAA 72 bp CTGGCAGCTGCTAGCTCACTTTCCACTTCTTTGTGCTaGCTTAATAGGGCCATTTCTCCCTCCTTGGCATCA +
Preference number: 6 (lower is better)
Translates to: LAAASSLSTSLC*LNRAISPSLAS
Trigger: TGATGCCAAGGAGGGAGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGGAAAGTGAGCTAGCAGCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CAA 72 bp CCGCTGTCGTTCTTGCGTAAACTGGGCTTGCAGTTGTaGCAAAGAAGTCTGAGACTGGGAAAGCTGTATCTC +
Preference number: 6 (lower is better)
Translates to: PLSFLRKLGLQL*QRSLRLGKLYL
Trigger: GAGATACAGCTTTCCCAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCAAGAACGACAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000621231.4
CDS CAA 72 bp TTGCGTAAGCCGCTGTCGTTCTTGCGTAAACTGGGCTaGCAGTTGTTGCAAAGAAGTCTGAGACTGGGAAAG +
Preference number: 6 (lower is better)
Translates to: LRKPLSFLRKLG*QLLQRSLRLGK
Trigger: CTTTCCCAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCAAGAACGACAGCGGCTTACGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000621231.4
CDS CAA 90 bp TTGCGTAAGCCGCTGTCGTTCTTGCGTAAACTGGGCTTGCAGTTGTaGCAAAGAAGTCTGAGACTGGGAAAGCTGTATCTCCAGATTCTG +
Preference number: 6 (lower is better)
Translates to: LRKPLSFLRKLGLQL*QRSLRLGKLYLQIL
Trigger: CAGAATCTGGAGATACAGCTTTCCCAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCAAGAACGACAGCGGCTTACGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000621231.4
CDS CAA 90 bp TTCAAGCTCTTGCGTAAGCCGCTGTCGTTCTTGCGTAAACTGGGCTaGCAGTTGTTGCAAAGAAGTCTGAGACTGGGAAAGCTGTATCTC +
Preference number: 6 (lower is better)
Translates to: FKLLRKPLSFLRKLG*QLLQRSLRLGKLYL
Trigger: GAGATACAGCTTTCCCAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCAAGAACGACAGCGGCTTACGCAAGAGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000621231.4
CDS GCA 72 bp TCGACTTCTCTAGACATGGTCACTATGCGTTGGACATaGTGGGCTTCTGCACAAAGTTGCATGTCCTCAACT +
Preference number: 6 (lower is better)
Translates to: STSLDMVTMRWT*WASAQSCMSST
Trigger: AGTTGAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGTGACCATGTCTAGAGAAGTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CCA 72 bp ACTTCTCTAGACATGGTCACTATGCGTTGGACATGCTaGGCTTCTGCACAAAGTTGCATGTCCTCAACTCTG +
Preference number: 6 (lower is better)
Translates to: TSLDMVTMRWTC*ASAQSCMSSTL
Trigger: CAGAGTTGAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGTGACCATGTCTAGAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CCA 72 bp ATCTCTTCGACTTCTCTAGACATGGTCACTATGCGTTaGACATGCTGGGCTTCTGCACAAAGTTGCATGTCC +
Preference number: 6 (lower is better)
Translates to: ISSTSLDMVTMR*TCWASAQSCMS
Trigger: GGACATGCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGTGACCATGTCTAGAGAAGTCGAAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CCA 72 bp CAAAAATGTCTTGGGCCCTTTAGGTGGCACTGGCTGTaGAAGTGGTTTGCTGCTGTTGAACTCAATATCGTG +
Preference number: 6 (lower is better)
Translates to: QKCLGPFRWHWL*KWFAAVELNIV
Trigger: CACGATATTGAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAGACATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000617072.4
ENST00000621231.4
CDS CAA 90 bp AAACGTTCTCTGGCAGCTGCTAGCTCACTTTCCACTTCTTTGTGCTaGCTTAATAGGGCCATTTCTCCCTCCTTGGCATCATCAAGCTGT +
Preference number: 6 (lower is better)
Translates to: KRSLAAASSLSTSLC*LNRAISPSLASSSC
Trigger: ACAGCTTGATGATGCCAAGGAGGGAGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGGAAAGTGAGCTAGCAGCTGCCAGAGAACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CAA 90 bp TGTTGTAAACGTTCTCTGGCAGCTGCTAGCTCACTTTCCACTTCTTaGTGCTTGCTTAATAGGGCCATTTCTCCCTCCTTGGCATCATCA +
Preference number: 6 (lower is better)
Translates to: CCKRSLAAASSLSTS*CLLNRAISPSLASS
Trigger: TGATGATGCCAAGGAGGGAGAAATGGCCCTATTAAGCAAGCACAAAGAAGTGGAAAGTGAGCTAGCAGCTGCCAGAGAACGTTTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CAA 90 bp GGAGTCCTGAAGACTAGCAATAAGTCCTTCTGCAGAGCCAAGACCTaGTTCACTTTTCCTTACCATATCTTGGAGGTGGCCAATCTCTTG +
Preference number: 6 (lower is better)
Translates to: GVLKTSNKSFCRAKT*FTFPYHILEVANLL
Trigger: CAAGAGATTGGCCACCTCCAAGATATGGTAAGGAAAAGTGAACAAGGTCTTGGCTCTGCAGAAGGACTTATTGCTAGTCTTCAGGACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
CDS CAA 90 bp AAAAATGTCTTGGGCCCTTTAGGTGGCACTGGCTGTGGAAGTGGTTaGCTGCTGTTGAACTCAATATCGTGGACTGGAGAATTAGGAATG +
Preference number: 6 (lower is better)
Translates to: KNVLGPLGGTGCGSG*LLLNSISWTGELGM
Trigger: CATTCCTAATTCTCCAGTCCACGATATTGAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAGACATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000617072.4
ENST00000621231.4
CDS TCA 72 bp TGCTGTGACTTCAATAGCTCTTGTATCTCCCGTCTGTaGGCAGCTTGCAAGTCTTCCAATGCCAATCGTTTG +
Preference number: 6 (lower is better)
Translates to: CCDFNSSCISRL*AACKSSNANRL
Trigger: CAAACGATTGGCATTGGAAGACTTGCAAGCTGCTCACAGACGGGAGATACAAGAGCTATTGAAGTCACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS GCA 72 bp AGACATGGTCACTATGCGTTGGACATGCTGGGCTTCTaGACAAAGTTGCATGTCCTCAACTCTGTGCTTATA +
Preference number: 6 (lower is better)
Translates to: RHGHYALDMLGF*TKLHVLNSVLI
Trigger: TATAAGCACAGAGTTGAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGTGACCATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS GCA 72 bp GTGAAGATAGGCAGAGATGGAAATTATGTTGCCGAATaGCAAGAATGCCTGGTGCTACCAGAAGCTCCACAT +
Preference number: 6 (lower is better)
Translates to: VKIGRDGNYVAE*QECLVLPEAPH
Trigger: ATGTGGAGCTTCTGGTAGCACCAGGCATTCTTGGCATTCGGCAACATAATTTCCATCTCTGCCTATCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS CCA 72 bp AAGTGGTTTGCTGCTGTTGAACTCAATATCGTGGACTaGAGAATTAGGAATGGGATCCAGGCGGTTAGGATG +
Preference number: 6 (lower is better)
Translates to: KWFAAVELNIVD*RIRNGIQAVRM
Trigger: CATCCTAACCGCCTGGATCCCATTCCTAATTCTCCAGTCCACGATATTGAGTTCAACAGCAGCAAACCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000617072.4
ENST00000621231.4
CDS CAA 72 bp AATCTCTTCGACTTCTCTAGACATGGTCACTATGCGTaGGACATGCTGGGCTTCTGCACAAAGTTGCATGTC +
Preference number: 6 (lower is better)
Translates to: NLFDFSRHGHYA*DMLGFCTKLHV
Trigger: GACATGCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGTGACCATGTCTAGAGAAGTCGAAGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CAA 90 bp TTTCCTTCTAATCTCTTCGACTTCTCTAGACATGGTCACTATGCGTaGGACATGCTGGGCTTCTGCACAAAGTTGCATGTCCTCAACTCT +
Preference number: 6 (lower is better)
Translates to: FPSNLFDFSRHGHYA*DMLGFCTKLHVLNS
Trigger: AGAGTTGAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGTGACCATGTCTAGAGAAGTCGAAGAGATTAGAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CAA 90 bp GGAGTCCTGAAGACTAGCAATAAGTCCTTCTGCAGAGCCAAGACCTaGTTCACTTTTCCTTACCATATCTTGGAGGTGGCCAATCTCTTT +
Preference number: 6 (lower is better)
Translates to: GVLKTSNKSFCRAKT*FTFPYHILEVANLF
Trigger: AAAGAGATTGGCCACCTCCAAGATATGGTAAGGAAAAGTGAACAAGGTCTTGGCTCTGCAGAAGGACTTATTGCTAGTCTTCAGGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621231.4
CDS TCA 72 bp TCTGCCTTTTCCTGGCCTTTATTTACTGAGGCACTGTaGTCCTGCTGTGACTTCAATAGCTCTTGTATCTCC +
Preference number: 6 (lower is better)
Translates to: SAFSWPLFTEAL*SCCDFNSSCIS
Trigger: GGAGATACAAGAGCTATTGAAGTCACAGCAGGATCACAGTGCCTCAGTAAATAAAGGCCAGGAAAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS TCA 72 bp TGCGTAAACTGGGCTTGCAGTTGTTGCAAAGAAGTCTaGGACTGGGAAAGCTGTATCTCCAGATTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: CVNWACSCCKEV*DWESCISRFCF
Trigger: GAAACAGAATCTGGAGATACAGCTTTCCCAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000621231.4
CDS TCA 72 bp GCCTTTCCTTCATCTTCTAATTCAAACCGAAGAGTCTaGAGTTCCTGTTCCATTTCTATCCGGAAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: AFPSSSNSNRRV*SSCSISIRKPS
Trigger: GGAGGGCTTCCGGATAGAAATGGAACAGGAACTTCAGACTCTTCGGTTTGAATTAGAAGATGAAGGAAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000621231.4
CDS GCA 72 bp TTCCTGGGAGTCCTGAAGACTAGCAATAAGTCCTTCTaGAGAGCCAAGACCTTGTTCACTTTTCCTTACCAT +
Preference number: 6 (lower is better)
Translates to: FLGVLKTSNKSF*RAKTLFTFPYH
Trigger: ATGGTAAGGAAAAGTGAACAAGGTCTTGGCTCTGCAGAAGGACTTATTGCTAGTCTTCAGGACTCCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS GCA 72 bp GGCAGAGATGGAAATTATGTTGCCGAATGCCAAGAATaGCTGGTGCTACCAGAAGCTCCACATTTAATAGAG +
Preference number: 6 (lower is better)
Translates to: GRDGNYVAECQE*LVLPEAPHLIE
Trigger: CTCTATTAAATGTGGAGCTTCTGGTAGCACCAGGCATTCTTGGCATTCGGCAACATAATTTCCATCTCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522284.5
CDS CAA 72 bp CACTATGCGTTGGACATGCTGGGCTTCTGCACAAAGTaGCATGTCCTCAACTCTGTGCTTATAAGCTTCAAA +
Preference number: 6 (lower is better)
Translates to: HYALDMLGFCTK*HVLNSVLISFK
Trigger: TTTGAAGCTTATAAGCACAGAGTTGAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CAA 72 bp AAGACTAGCAATAAGTCCTTCTGCAGAGCCAAGACCTaGTTCACTTTTCCTTACCATATCTTGGAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: KTSNKSFCRAKT*FTFPYHILEVA
Trigger: GGCCACCTCCAAGATATGGTAAGGAAAAGTGAACAAGGTCTTGGCTCTGCAGAAGGACTTATTGCTAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CAA 72 bp CCATTGCCCACTCCACCAGATTCCAGAGCACTTAGATaGGGAACACTCACAAACCTGTTTGTTGGTGATTTA +
Preference number: 6 (lower is better)
Translates to: PLPTPPDSRALR*GTLTNLFVGDL
Trigger: TAAATCACCAACAAACAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGGAATCTGGTGGAGTGGGCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000617072.4
ENST00000621231.4
CDS CAA 90 bp AGACATGGTCACTATGCGTTGGACATGCTGGGCTTCTGCACAAAGTaGCATGTCCTCAACTCTGTGCTTATAAGCTTCAAATTCTGTCAA +
Preference number: 6 (lower is better)
Translates to: RHGHYALDMLGFCTK*HVLNSVLISFKFCQ
Trigger: TTGACAGAATTTGAAGCTTATAAGCACAGAGTTGAGGACATGCAACTTTGTGCAGAAGCCCAGCATGTCCAACGCATAGTGACCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CAA 90 bp GAAGAGTCTGAAGTTCCTGTTCCATTTCTATCCGGAAGCCCTCCATaGACTCTCTGTGTGCATCTTTTAGTGATTGAAGCTCTGCAGAAT +
Preference number: 6 (lower is better)
Translates to: EESEVPVPFLSGSPP*TLCVHLLVIEALQN
Trigger: ATTCTGCAGAGCTTCAATCACTAAAAGATGCACACAGAGAGTCAATGGAGGGCTTCCGGATAGAAATGGAACAGGAACTTCAGACTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000621231.4
CDS CCA 72 bp CATTGCCCACTCCACCAGATTCCAGAGCACTTAGATTaGGAACACTCACAAACCTGTTTGTTGGTGATTTAT +
Preference number: 6 (lower is better)
Translates to: HCPLHQIPEHLD*EHSQTCLLVIY
Trigger: ATAAATCACCAACAAACAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGGAATCTGGTGGAGTGGGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000617072.4
ENST00000621231.4
CDS CAA 90 bp TTAGGATGTCCATTGCCCACTCCACCAGATTCCAGAGCACTTAGATaGGGAACACTCACAAACCTGTTTGTTGGTGATTTATCATTCTTC +
Preference number: 6 (lower is better)
Translates to: LGCPLPTPPDSRALR*GTLTNLFVGDLSFF
Trigger: GAAGAATGATAAATCACCAACAAACAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGGAATCTGGTGGAGTGGGCAATGGACATCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000482219.6
ENST00000521043.5
ENST00000521531.5
ENST00000617072.4
ENST00000621231.4
CDS GCA 72 bp TATCTCCCGTCTGTGAGCAGCTTGCAAGTCTTCCAATaGCAATCGTTTGTCTTTTTCAAACTGTACTTGAAG +
Preference number: 6 (lower is better)
Translates to: YLPSVSSLQVFQ*QSFVFFKLYLK
Trigger: CTTCAAGTACAGTTTGAAAAAGACAAACGATTGGCATTGGAAGACTTGCAAGCTGCTCACAGACGGGAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CCA 72 bp GCTGTTTTTGAAGAACCTGAACATTGTTCTCTGCTATaGCAAGTGCCGTCTGAAGCTTTTGGCATTTGTCAA +
Preference number: 6 (lower is better)
Translates to: AVFEEPEHCSLL*QVPSEAFGICQ
Trigger: TTGACAAATGCCAAAAGCTTCAGACGGCACTTGCCATAGCAGAGAACAATGTTCAGGTTCTTCAAAAACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CCA 72 bp CTTTGTGCTTGCTTAATAGGGCCATTTCTCCCTCCTTaGCATCATCAAGCTGTTTTTGAAGAACCTGAACAT +
Preference number: 6 (lower is better)
Translates to: LCACLIGPFLPP*HHQAVFEEPEH
Trigger: ATGTTCAGGTTCTTCAAAAACAGCTTGATGATGCCAAGGAGGGAGAAATGGCCCTATTAAGCAAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS TCA 72 bp AATTCTTCCAAAGTCTTAGAATGGGCCTCGTTTAATTaGGTCACCTCCTCTTCCAATCTACTTTGCAGGTTT +
Preference number: 6 (lower is better)
Translates to: NSSKVLEWASFN*VTSSSNLLCRF
Trigger: AAACCTGCAAAGTAGATTGGAAGAGGAGGTGACTCAATTAAACGAGGCCCATTCTAAGACTTTGGAAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000448815.2
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS TCA 72 bp CCTATCTCTAGAAACAAATCCCTTGGCCGTCCTGGTTaGTTAGTCATTACACATTTACATAGCACAGAAAAG +
Preference number: 6 (lower is better)
Translates to: PISRNKSLGRPG*LVITHLHSTEK
Trigger: CTTTTCTGTGCTATGTAAATGTGTAATGACTAATCAACCAGGACGGCCAAGGGATTTGTTTCTAGAGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352896.9
CDS GCA 72 bp ATTGCATTACTGTGGACAGCTTCAATTGCCATATGGTaGTTCCAAGCTAATTCTTCCAAAGTCTTAGAATGG +
Preference number: 6 (lower is better)
Translates to: IALLWTASIAIW*FQANSSKVLEW
Trigger: CCATTCTAAGACTTTGGAAGAATTAGCTTGGAAGCACCATATGGCAATTGAAGCTGTCCACAGTAATGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000448815.2
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS GCA 72 bp GCCCAGGTAATCATACAAACATTTGATATTTTCCCATaGCTTCTCTTGGCTGATCCAAATTCTTTGGAATTG +
Preference number: 6 (lower is better)
Translates to: AQVIIQTFDIFP*LLLADPNSLEL
Trigger: CAATTCCAAAGAATTTGGATCAGCCAAGAGAAGGCATGGGAAAATATCAAATGTTTGTATGATTACCTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352896.9
CDS CCA 72 bp ATAGGCAACAGGTCTAAAGAATTCTTGCCTCTTGATTaGCTGTATTCAACTTGTCTTCCAGTACTTCCTTTA +
Preference number: 6 (lower is better)
Translates to: IGNRSKEFLPLD*LYSTCLPVLPL
Trigger: TAAAGGAAGTACTGGAAGACAAGTTGAATACAGCCAATCAAGAGGCAAGAATTCTTTAGACCTGTTGCCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448815.2
CDS CAA 72 bp ATCTTTAATTGTAACTTCCTGGGTCATTTGAGTTGCTaGAAGCATTCCAATATGACTAGCTTTGAGGACAAG +
Preference number: 6 (lower is better)
Translates to: IFNCNFLGHLSC*KHSNMTSFEDK
Trigger: CTTGTCCTCAAAGCTAGTCATATTGGAATGCTTCAAGCAACTCAAATGACCCAGGAAGTTACAATTAAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368475.8
ENST00000475529.7
ENST00000521531.5
ENST00000522284.5
ENST00000621231.4
CDS CAA 90 bp TCTTCCATTTCTTCTAATGACACTTGTAAAGCGGCATTTATTTCCTaGAGTAGCTCGTTAGTCTTATTAAAATCTGCCCGCATGATATTT +
Preference number: 6 (lower is better)
Translates to: SSISSNDTCKAAFIS*SSSLVLLKSARMIF
Trigger: AAATATCATGCGGGCAGATTTTAATAAGACTAACGAGCTACTCAAGGAAATAAATGCCGCTTTACAAGTGTCATTAGAAGAAATGGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338891.12
ENST00000368472.6
ENST00000475529.7
ENST00000521043.5
ENST00000617072.4
ENST00000621231.4
CDS CAA 72 bp CCAGAGCACTTAGATTGGGAACACTCACAAACCTGTTaGTTGGTGATTTATCATTCTTCTTCTTTTGAATTA +
Preference number: 6 (lower is better)
Translates to: PEHLDWEHSQTC*LVIYHSSSFEL
Trigger: TAATTCAAAAGAAGAAGAATGATAAATCACCAACAAACAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368475.8
ENST00000521043.5
ENST00000521531.5
CDS TCA 72 bp CTTAGCCAATGGATTAATAACACCAACAGTAGGACTTaGGTTAAACACTTTGTTGAAGTTAGTTTCTCGATT +
Preference number: 6 (lower is better)
Translates to: LSQWINNTNSRT*VKHFVEVSFSI
Trigger: AATCGAGAAACTAACTTCAACAAAGTGTTTAACTCAAGTCCTACTGTTGGTGTTATTAATCCATTGGCTAAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000475529.7
ENST00000481884.6
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4
CDS CAA 72 bp TTAATAACACCAACAGTAGGACTTGAGTTAAACACTTaGTTGAAGTTAGTTTCTCGATTGACTAATTCCAGC +
Preference number: 6 (lower is better)
Translates to: LITPTVGLELNT*LKLVSRLTNSS
Trigger: GCTGGAATTAGTCAATCGAGAAACTAACTTCAACAAAGTGTTTAACTCAAGTCCTACTGTTGGTGTTATTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338891.12
ENST00000352896.9
ENST00000368472.6
ENST00000475529.7
ENST00000517987.5
ENST00000617072.4
ENST00000621231.4