Pregenerated sensors for FAM167B (Homo sapiens)
Ensembl gene IDs: ENSG00000183615Ensembl transcript IDs: ENST00000373582.4
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAACCAGAGAAAGCGTTTATTGAGGAGTTTGAGGGTGTGAGCTCCTCCTCCTCCGAGGAAACAGGATGCTaGGGTTTTGCACTCTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: EPEKAFIEEFEGVSSSSSEETGC*GFALLE Trigger: TTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTC...GGAGGAGGAGGAGCTCACACCCTCAAACTCCTCAATAAACGCTTTCTCTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR GCA 90 bp | GAACCAGAGAAAGCGTTTATTGAGGAGTTTGAGGGTGTGAGCTCCTCCTCCTCCCGCAGCCGCAGCAGCTaGCCTGCCAGCTGCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: EPEKAFIEEFEGVSSSSSRSRSS*PASCLS Trigger: GGACAGGCAGCTGGCAGGGCAGCTGCTGCGGCTGCG...GGAGGAGGAGGAGCTCACACCCTCAAACTCCTCAATAAACGCTTTCTCTGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR GCA 90 bp | GAACCAGAGAAAGCGTTTATTGAGGAGTTTGAGGGTGTGAGCTCCTCCTCCTCCGCCAGCTGCCTGTCCTaGGCCTGCATCTCCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: EPEKAFIEEFEGVSSSSSASCLS*ACISRS Trigger: GCTGCGGGAGATGCAGGCGCAGGACAGGCAGCTGGC...GGAGGAGGAGGAGCTCACACCCTCAAACTCCTCAATAAACGCTTTCTCTGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CCA 90 bp | CAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGAGCCCTGCGCCAGGCCTaGCTCTGGACCTGGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: QQRKQDAGVLHSWNSALRALRQA*LWTWAV Trigger: GACAGCCCAGGTCCAGAGCCAGGCCTGGCGCAGGGC...TCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CCA 90 bp | CAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGACGCCAGGCCTGGCTCTaGACCTGGGCTGTCCACTCC | + |
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Preference number: 4 (lower is better) Translates to: QQRKQDAGVLHSWNSALRRQAWL*TWAVHS Trigger: GGAGTGGACAGCCCAGGTCCAGAGCCAGGCCTGGCG...TCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CCA 90 bp | CAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGAGGTCCAGGTTTGGCTTaGGCCCTGCGCCAGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QQRKQDAGVLHSWNSALRGPGLA*ALRQAW Trigger: CCAGGCCTGGCGCAGGGCCCAAGCCAAACCTGGACC...TCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CCA 90 bp | CAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGATTCAGTCGGTGCAGCTaGGCCCGCAGCCGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QQRKQDAGVLHSWNSALRFSRCS*ARSRSS Trigger: GCTGCTGCGGCTGCGGGCCCAGCTGCACCGACTGAA...TCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR GCA 90 bp | CAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGAGAGGGCCGCCGAGTCTaGAGCTGCAGCTTGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: QQRKQDAGVLHSWNSALREGRRV*SCSLAV Trigger: GACAGCCAAGCTGCAGCTGCAGACTCGGCGGCCCTC...TCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR GCA 90 bp | TCAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGGTTTGGCTTGGGCCCTaGGCCAGGCCTGGCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SAEETGCWGFALLEFSSQVWLGP*ARPGSG Trigger: TCCAGAGCCAGGCCTGGCGCAGGGCCCAAGCCAAAC...CTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR GCA 90 bp | TCAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGTGCCTGTCCTGCGCCTaGATCTCCCGCAGCTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: SAEETGCWGFALLEFSSQCLSCA*ISRSSR Trigger: ACGGGAGCTGCGGGAGATGCAGGCGCAGGACAGGCA...CTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CCA 90 bp | TCAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGGTCCCCAGGTCCCCCTaGTCCAGGTTTGGCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SAEETGCWGFALLEFSSQVPRSP*SRFGLG Trigger: GCCCAAGCCAAACCTGGACCAGGGGGACCTGGGGAC...CTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CCA 90 bp | CAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGACCTCCCCCTCCCAGCTaGGTCAGCAGAGGAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: QQRKQDAGVLHSWNSALRPPPPS*VSRGNR Trigger: CCTGTTTCCTCTGCTGACCCAGCTGGGAGGGGGAGG...TCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR TCA 90 bp | TCAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGATGGCAGGTTTGAGGTaGGTGACAGGGCAGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SAEETGCWGFALLEFSSQMAGLR*VTGQGC Trigger: GCAGCCCTGCCCTGTCACTCACCTCAAACCTGCCAT...CTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR TCA 90 bp | CAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGATGTCCACTCCAGATATaGGGGCCGCCGAGTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QQRKQDAGVLHSWNSALRCPLQI*GPPSLQ Trigger: CTGCAGACTCGGCGGCCCTCATATCTGGAGTGGACA...TCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR TCA 90 bp | GAACCAGAGAAAGCGTTTATTGAGGAGTTTGAGGGTGTGAGCTCCTCCTCCTCCAGCTCCTGGTGCAGGTaGCAGGCTTGGTCCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: EPEKAFIEEFEGVSSSSSSSWCR*QAWSIF Trigger: GAAGATGGACCAAGCCTGTCACCTGCACCAGGAGCT...GGAGGAGGAGGAGCTCACACCCTCAAACTCCTCAATAAACGCTTTCTCTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR TCA 90 bp | TCAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGAGGAGTTTGAGGGTGTaGGCTCCTCCTCCTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SAEETGCWGFALLEFSSQRSLRV*APPPPP Trigger: AGGGGGAGGAGGAGGAGCTCACACCCTCAAACTCCT...CTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR GCA 90 bp | GAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGAAACCTGAAAGCTGCCCTGCCAGCTaGCTGTCCTGCGCCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: ETGCWGFALLEFSSQKPESCPAS*LSCACI Trigger: GATGCAGGCGCAGGACAGGCAGCTGGCAGGGCAGCT...TTCAGGTTTCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR TCA 90 bp | GAACCAGAGAAAGCGTTTATTGAGGAGTTTGAGGGTGTGAGCTCCTCCTCCTCCAAGGGCGGAGTCCATTaGGTCGAAACCACAGATGTC | + |
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Preference number: 4 (lower is better) Translates to: EPEKAFIEEFEGVSSSSSKGGVH*VETTDV Trigger: GACATCTGTGGTTTCGACTCAATGGACTCCGCCCTT...GGAGGAGGAGGAGCTCACACCCTCAAACTCCTCAATAAACGCTTTCTCTGGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR GCA 90 bp | CAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGAGTGACAGGGCAGGGCTaGAGCTCTGAGATTAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: QQRKQDAGVLHSWNSALRVTGQG*SSEIRE Trigger: TTCCCTAATCTCAGAGCTGCAGCCCTGCCCTGTCAC...TCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR GCA 90 bp | CAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGACAGCTTGGCTGTCAGTaGCTTCACAGAGTCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: QQRKQDAGVLHSWNSALRQLGCQ*LHRVQA Trigger: AGCCTGGACTCTGTGAAGGCACTGACAGCCAAGCTG...TCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CCA 90 bp | GAACCAGAGAAAGCGTTTATTGAGGAGTTTGAGGGTGTGAGCTCCTCCTCCTCCGTGCCAGGGAGTGTGTaGTGGTCAATGTTCAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: EPEKAFIEEFEGVSSSSSVPGSV*WSMFKV Trigger: CACCTTGAACATTGACCACCACACACTCCCTGGCAC...GGAGGAGGAGGAGCTCACACCCTCAAACTCCTCAATAAACGCTTTCTCTGGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CCA 90 bp | CAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGATCTGCAGCTGCAGCTTaGCTGTCAGTGCCTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: QQRKQDAGVLHSWNSALRSAAAA*LSVPSQ Trigger: CTGTGAAGGCACTGACAGCCAAGCTGCAGCTGCAGA...TCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR GCA 90 bp | GAACCAGAGAAAGCGTTTATTGAGGAGTTTGAGGGTGTGAGCTCCTCCTCCTCCGCAGAGGAAACAGGATaGTGGGGTTTTGCACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: EPEKAFIEEFEGVSSSSSAEETG*WGFALL Trigger: CAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGC...GGAGGAGGAGGAGCTCACACCCTCAAACTCCTCAATAAACGCTTTCTCTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CCA 90 bp | GAACCAGAGAAAGCGTTTATTGAGGAGTTTGAGGGTGTGAGCTCCTCCTCCTCCAGATTAGGGAAAGGCTaGCAGTATTGCCCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: EPEKAFIEEFEGVSSSSSRLGKG*QYCPGR Trigger: TCTCCCTGGGCAATACTGCCAGCCTTTCCCTAATCT...GGAGGAGGAGGAGCTCACACCCTCAAACTCCTCAATAAACGCTTTCTCTGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR GCA 90 bp | GAACCAGAGAAAGCGTTTATTGAGGAGTTTGAGGGTGTGAGCTCCTCCTCCTCCAGGATGCTGGGGTTTTaGACTCTTGGAATTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: EPEKAFIEEFEGVSSSSSRMLGF*TLGIQL Trigger: GAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCT...GGAGGAGGAGGAGCTCACACCCTCAAACTCCTCAATAAACGCTTTCTCTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CCA 90 bp | GAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGAAACCTGAATCTTCACCCACTGCCTaGAATTTCAGTAGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ETGCWGFALLEFSSQKPESSPTA*NFSSPR Trigger: CCTGGGGCTACTGAAATTCCAGGCAGTGGGTGAAGA...TTCAGGTTTCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CCA 90 bp | GAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGAAACCTGAAGAGGAAACAGGATGCTaGGGTTTTGCACTCTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: ETGCWGFALLEFSSQKPEEETGC*GFALLE Trigger: TTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTC...TTCAGGTTTCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS GCA 90 bp | AGGGTGAAGCGCCGGGCGCTGATGTTCATGCGCGTGAGGCCCAGGTaGCGCAGCAGCGGGGCCAGGGCTAGGCCGGCCCCGGGCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RVKRRALMFMRVRPR*RSSGARARPAPGSS Trigger: GCTGGAGCCCGGGGCCGGCCTAGCCCTGGCCCCGCTGCTGCGGCACCTGGGCCTCACGCGCATGAACATCAGCGCCCGGCGCTTCACCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS GCA 90 bp | TGGTCCATCTTCAGTCGGTGCAGCTGGGCCCGCAGCCGCAGCAGCTaGCCTGCCAGCTGCCTGTCCTGCGCCTGCATCTCCCGCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: WSIFSRCSWARSRSS*PASCLSCACISRSS Trigger: GGAGCTGCGGGAGATGCAGGCGCAGGACAGGCAGCTGGCAGGGCAGCTGCTGCGGCTGCGGGCCCAGCTGCACCGACTGAAGATGGACCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS CCA 90 bp | CCAGGTCCCCCTGGTCCAGGTTTGGCTTGGGCCCTGCGCCAGGCCTaGCTCTGGACCTGGGCTGTCCACTCCAGATATGAGGGCCGCCGA | + |
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Preference number: 5 (lower is better) Translates to: PGPPGPGLAWALRQA*LWTWAVHSRYEGRR Trigger: TCGGCGGCCCTCATATCTGGAGTGGACAGCCCAGGTCCAGAGCCAGGCCTGGCGCAGGGCCCAAGCCAAACCTGGACCAGGGGGACCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS CCA 90 bp | GGTCCAGGTTTGGCTTGGGCCCTGCGCCAGGCCTGGCTCTGGACCTaGGCTGTCCACTCCAGATATGAGGGCCGCCGAGTCTGCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GPGLAWALRQAWLWT*AVHSRYEGRRVCSC Trigger: GCAGCTGCAGACTCGGCGGCCCTCATATCTGGAGTGGACAGCCCAGGTCCAGAGCCAGGCCTGGCGCAGGGCCCAAGCCAAACCTGGACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS GCA 90 bp | GTATTGCCCAGGGAGAGGTGGCAGAAGTTGAGGGTGAGAAGAGCGTaGCAGGGAGTGTGTGGTGGTCAATGTTCAAGGTGGGTTAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: VLPRERWQKLRVRRA*QGVCGGQCSRWVRG Trigger: CCCCCTAACCCACCTTGAACATTGACCACCACACACTCCCTGGCACGCTCTTCTCACCCTCAACTTCTGCCACCTCTCCCTGGGCAATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CAA 90 bp | GAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGAAACCTGAACCCCCTGGTCCAGGTTaGGCTTGGGCCCTGCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ETGCWGFALLEFSSQKPEPPGPG*AWALRQ Trigger: CTGGCGCAGGGCCCAAGCCAAACCTGGACCAGGGGG...TTCAGGTTTCTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CAA 90 bp | GAACCAGAGAAAGCGTTTATTGAGGAGTTTGAGGGTGTGAGCTCCTCCTCCTCCGTGCAGGTGACAGGCTaGGTCCATCTTCAGTCGGTG | + |
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Preference number: 5 (lower is better) Translates to: EPEKAFIEEFEGVSSSSSVQVTG*VHLQSV Trigger: CACCGACTGAAGATGGACCAAGCCTGTCACCTGCAC...GGAGGAGGAGGAGCTCACACCCTCAAACTCCTCAATAAACGCTTTCTCTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CAA 90 bp | TCAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGCAAGGGCGGAGTCCATaGAGTCGAAACCACAGATGT | + |
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Preference number: 5 (lower is better) Translates to: SAEETGCWGFALLEFSSQQGRSP*SRNHRC Trigger: ACATCTGTGGTTTCGACTCAATGGACTCCGCCCTTG...CTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS-3UTR CAA 90 bp | TCAGCAGAGGAAACAGGATGCTGGGGTTTTGCACTCTTGGAATTCAGCTCTCAGCAGGATGCTGGGGTTTaGCACTCTTGGAATTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SAEETGCWGFALLEFSSQQDAGV*HSWNSA Trigger: AGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTG...CTGAGAGCTGAATTCCAAGAGTGCAAAACCCCAGCATCCTGTTTCCTCTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS GCA 72 bp | TTCAGTCGGTGCAGCTGGGCCCGCAGCCGCAGCAGCTaGCCTGCCAGCTGCCTGTCCTGCGCCTGCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: FSRCSWARSRSS*PASCLSCACIS Trigger: GGAGATGCAGGCGCAGGACAGGCAGCTGGCAGGGCAGCTGCTGCGGCTGCGGGCCCAGCTGCACCGACTGAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS CCA 72 bp | CCAGGTTTGGCTTGGGCCCTGCGCCAGGCCTGGCTCTaGACCTGGGCTGTCCACTCCAGATATGAGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: PGLAWALRQAWL*TWAVHSRYEGR Trigger: GCGGCCCTCATATCTGGAGTGGACAGCCCAGGTCCAGAGCCAGGCCTGGCGCAGGGCCCAAGCCAAACCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS CCA 72 bp | CCTGGTCCAGGTTTGGCTTGGGCCCTGCGCCAGGCCTaGCTCTGGACCTGGGCTGTCCACTCCAGATATGAG | + |
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Preference number: 6 (lower is better) Translates to: PGPGLAWALRQA*LWTWAVHSRYE Trigger: CTCATATCTGGAGTGGACAGCCCAGGTCCAGAGCCAGGCCTGGCGCAGGGCCCAAGCCAAACCTGGACCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS TCA 72 bp | CAGCTCCCGTCGGAGCCACTCAAGGGCGGAGTCCATTaGGTCGAAACCACAGATGTCCCCAGGTCCCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: QLPSEPLKGGVH*VETTDVPRSPW Trigger: CCAGGGGGACCTGGGGACATCTGTGGTTTCGACTCAATGGACTCCGCCCTTGAGTGGCTCCGACGGGAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS CAA 72 bp | GCAGCTCCCGTCGGAGCCACTCAAGGGCGGAGTCCATaGAGTCGAAACCACAGATGTCCCCAGGTCCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: AAPVGATQGRSP*SRNHRCPQVPL Trigger: CAGGGGGACCTGGGGACATCTGTGGTTTCGACTCAATGGACTCCGCCCTTGAGTGGCTCCGACGGGAGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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| CDS GCA 72 bp | AGGGAGAGGTGGCAGAAGTTGAGGGTGAGAAGAGCGTaGCAGGGAGTGTGTGGTGGTCAATGTTCAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RERWQKLRVRRA*QGVCGGQCSRW Trigger: CCACCTTGAACATTGACCACCACACACTCCCTGGCACGCTCTTCTCACCCTCAACTTCTGCCACCTCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373582.4 |
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