RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM117A (Homo sapiens)

Ensembl gene IDs: ENSG00000121104

Ensembl transcript IDs: ENST00000240364.7, ENST00000503573.5, ENST00000503720.1, ENST00000503855.5, ENST00000505159.5, ENST00000506156.1, ENST00000509347.5, ENST00000511743.5, ENST00000513602.5, ENST00000514018.5, ENST00000514841.1, ENST00000515240.5

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTATGATTAGGTCGAGGGGAGGCAGCAAAGGCAAGGACTGGAGATaGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGGAGGC +
Preference number: 1 (lower is better)
Translates to: AMIRSRGGSKGKDWR*AAIFKKGWVSWRGG
Trigger: GCCTCCTCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAGTCCTTGCCTTTGCTGCCTCCCCTCGACCTAATCATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR TCA 90 bp CTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAAGCGAGATaGAAATGCCACTTGGGAAAACACTTGTTTCCTCCCTCTGCCAGC +
Preference number: 1 (lower is better)
Translates to: LGCYLRQSLVRVKAR*KCHLGKHLFPPSAS
Trigger: GCTGGCAGAGGGAGGAAACAAGTGTTTTCCCAAGTGGCATTTTCATCTCGCTTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240364.7
3UTR-3UTR GCA 90 bp TGCCCAGCTACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCACCTGGGGAGGGACCTaGCACCAAGGCACTGGTCTC +
Preference number: 2 (lower is better)
Translates to: CPATSGEGRSHHVQRGRCTWGGT*HQGTGL
Trigger: GAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGT...GCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGTAGCTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
3UTR-3UTR CCA 90 bp AGGGGAGATCCCGGGTTTGAGGGGCAGTTACGGAAGATGAAGCCCATGCCGGGGGCCAGGCCACAAGGCTaGGGAGATGCCAAGGACATG +
Preference number: 2 (lower is better)
Translates to: RGDPGFEGQLRKMKPMPGARPQG*GDAKDM
Trigger: CATGTCCTTGGCATCTCCCCAGCCTTGTGGCCTGGC...CCCCGGCATGGGCTTCATCTTCCGTAACTGCCCCTCAAACCCGGGATCTCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR-3UTR CCA 90 bp AGGGGAGATCCCGGGTTTGAGGGGCAGTTACGGAAGATGAAGCCCATGCCGGGGAGGAGGCTTTGTCGTTaGGGGTGGATGCCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: RGDPGFEGQLRKMKPMPGRRLCR*GWMPAP
Trigger: AGGAGCTGGCATCCACCCCCAACGACAAAGCCTCCT...CCCCGGCATGGGCTTCATCTTCCGTAACTGCCCCTCAAACCCGGGATCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR-3UTR GCA 90 bp TCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGACACAACCTGGGGAGGGACCTaGCACCAAGGCACTGGTCTC +
Preference number: 2 (lower is better)
Translates to: SRSEGPVPIKKRTQGFDTTWGGT*HQGTGL
Trigger: GAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGT...TGTGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
3UTR-3UTR GCA 90 bp CTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGGAGGCTTGGAGCTGGGGCCCGGTaGCCATCAGGGATATCAAGG +
Preference number: 2 (lower is better)
Translates to: LEMGCHLQERLGVLERRLGAGAR*PSGISR
Trigger: CCTTGATATCCCTGATGGGCACCGGGCCCCAGCTCC...AAGCCTCCTCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR-3UTR CCA 90 bp AGGGGAGATCCCGGGTTTGAGGGGCAGTTACGGAAGATGAAGCCCATGCCGGGGACATGGAAGGAGAGCTaGCAAGGTTGCCAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: RGDPGFEGQLRKMKPMPGTWKES*QGCQAP
Trigger: TGGAGCCTGGCAACCTTGCCAGCTCTCCTTCCATGT...CCCCGGCATGGGCTTCATCTTCCGTAACTGCCCCTCAAACCCGGGATCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR-3UTR GCA 90 bp CTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGGAGGCTTGGGGATGATCACAGCTaGCACTCTGGGGAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: LEMGCHLQERLGVLERRLGDDHS*HSGEEL
Trigger: CAGCTCCTCCCCAGAGTGGCAGCTGTGATCATCCCC...AAGCCTCCTCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR-3UTR GCA 90 bp GGCAAGGACTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGAGAGCTGGCAAGGTTaGCAGGCTCCAGGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GKDWRWAAIFKKGWVSWRESWQG*QAPGGG
Trigger: TCCTCCTCCTGGAGCCTGGCAACCTTGCCAGCTCTC...TCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAGTCCTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR-3UTR CCA 90 bp GACACAGTAAGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATCCATCTCAGGGGACCTaGGGAGGGACCTGCCACCAA +
Preference number: 2 (lower is better)
Translates to: DTVSERKCSKAEREGPLHPSQGT*GGTCHQ
Trigger: TTGGTGGCAGGTCCCTCCCCAGGTCCCCTGAGATGG...ATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTACTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
3UTR-3UTR TCA 90 bp TGTCGTTGGGGGTGGATGCCAGCTCCTCGGCGGCACCCCGATGTTCCTCATGACAGGATCTGTAGGGCTTaGTCAATGTGTTGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: CRWGWMPAPRRHPDVPHDRICRA*SMCCPH
Trigger: ATGGGGACAACACATTGATCAAGCCCTACAGATCCT...GTCATGAGGAACATCGGGGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR-3UTR GCA 90 bp CCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCTTCGTTCAGAGGGGCCGGTaGCCATCAAAAAGAGGACCC +
Preference number: 2 (lower is better)
Translates to: PPIQSFGLTPRGGGLKTFVQRGR*PSKRGP
Trigger: GGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAAC...GAAGGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000240364.7
3UTR-3UTR TCA 90 bp GGGCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAAGCGGTGTTTTCCACCAAGTaGGGGATGTGGCAGGTACAC +
Preference number: 2 (lower is better)
Translates to: GLGGLGCYLRQSLVRVKAVFSTK*GMWQVH
Trigger: GTGTACCTGCCACATCCCTCACTTGGTGGAAAACAC...CGCTTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240364.7
3UTR-3UTR GCA 90 bp CAGCTACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATGTAAGTGAAAGAAAGTaGTCGAAGGCCGAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: QLLVEKAGPITFRGAGAHVSERK*SKAERE
Trigger: TTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTAC...ATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGTAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
3UTR-3UTR TCA 90 bp GCTGAATTGGTCAAGTGTTATGGCCCGTTAGGGCTGCTTTGGTCAGCTCCTCCAGCAGGTACACAGGTGTaGATTGTGAGCTGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: AELVKCYGPLGLLWSAPPAGTQV*IVSCPA
Trigger: AGCTGGGCAGCTCACAATTCACACCTGTGTACCTGC...TGGAGGAGCTGACCAAAGCAGCCCTAACGGGCCATAACACTTGACCAATTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240364.7
3UTR-3UTR GCA 90 bp GTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGTAAGTGAAAGAAAGTaGTCGAAGGCCGAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: VPSRSEGPVPIKKRTQGFVSERK*SKAERE
Trigger: TTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTAC...AAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
3UTR-3UTR CCA 90 bp GCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAAGCGAGCCGTTAGGGCTGCTTTaGTCAGCTCCTCCAATGAGA +
Preference number: 2 (lower is better)
Translates to: AGRAGLLLKTIFSQGESEPLGLL*SAPPMR
Trigger: TCTCATTGGAGGAGCTGACCAAAGCAGCCCTAACGG...CTCGCTTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240364.7
3UTR-3UTR CCA 90 bp CTGGGGCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAATCTCTCCTTCGTTCATaGCCAGCTTGCTCTGTGACA +
Preference number: 2 (lower is better)
Translates to: LGLGGLGCYLRQSLVRVKSLLRS*PACSVT
Trigger: TGTCACAGAGCAAGCTGGCCATGAACGAAGGAGAGA...TTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240364.7
3UTR-3UTR CCA 90 bp CTCTACATCGATACAAGAAAAATAGGCATTTTTCTAATCCATCCAGCCCTGGGGGGGGGATCTATCTTATaGTCTCCTGGAGGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: LYIDTRKIGIFLIHPALGGGSIL*SPGGEG
Trigger: TCCCTCTCCTCCAGGAGACCATAAGATAGATCCCCC...CCCCAGGGCTGGATGGATTAGAAAAATGCCTATTTTTCTTGTATCGATGTAGAG
47% GC, longest homopolymer 9 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000240364.7
3UTR-3UTR TCA 90 bp CTCTACATCGATACAAGAAAAATAGGCATTTTTCTAATCCATCCAGCCCTGGGGAGGGTGAAAGCGAGATaGAAATGCCACTTGGGAAAA +
Preference number: 2 (lower is better)
Translates to: LYIDTRKIGIFLIHPALGRVKAR*KCHLGK
Trigger: TTTTCCCAAGTGGCATTTTCATCTCGCTTTCACCCT...CCCCAGGGCTGGATGGATTAGAAAAATGCCTATTTTTCTTGTATCGATGTAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000240364.7
3UTR GCA 72 bp GTGTCCTGGAGAGGAGGCTTTGTCGTTGGGGGTGGATaGCAGCTCCTCGGCGGCACCCCGATGTTCCTCATG +
Preference number: 3 (lower is better)
Translates to: VSWRGGFVVGGG*QLLGGTPMFLM
Trigger: CATGAGGAACATCGGGGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGACAAAGCCTCCTCTCCAGGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR-3UTR CAA 90 bp AGGGGAGATCCCGGGTTTGAGGGGCAGTTACGGAAGATGAAGCCCATGCCGGGGCCTGGAGAGGAGGCTTaGTCGTTGGGGGTGGATGCC +
Preference number: 3 (lower is better)
Translates to: RGDPGFEGQLRKMKPMPGPGEEA*SLGVDA
Trigger: GGCATCCACCCCCAACGACAAAGCCTCCTCTCCAGG...CCCCGGCATGGGCTTCATCTTCCGTAACTGCCCCTCAAACCCGGGATCTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR GCA 72 bp AGCCCTGGGGCGGGCGGAGAGTATAGAGTCGCCATTTaGCACCTGGAGGAATGCCAGCTCTCCTCCCCACTA +
Preference number: 3 (lower is better)
Translates to: SPGAGGEYRVAI*HLEECQLSSPL
Trigger: TAGTGGGGAGGAGAGCTGGCATTCCTCCAGGTGGCAAATGGCGACTCTATACTCTCCGCCCGCCCCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240364.7
3UTR GCA 72 bp GGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTaGCCATCAAAAAGAGGACCCAGGGCTTTGACACAG +
Preference number: 3 (lower is better)
Translates to: GEGRSHHVQRGR*PSKRGPRALTQ
Trigger: CTGTGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
3UTR GCA 72 bp CTCCCCACTACCCACCTGGGGCTGGGCGGGCTGGGCTaGTACTTAAGACAATCTTTAGTCAGGGTGAAAGCG +
Preference number: 3 (lower is better)
Translates to: LPTTHLGLGGLG*YLRQSLVRVKA
Trigger: CGCTTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGCCCCAGGTGGGTAGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240364.7
3UTR GCA 72 bp GAGGGGAGGCAGCAAAGGCAAGGACTGGAGATGGGCTaGCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: EGRQQRQGLEMG*HLQERLGVLER
Trigger: CCTCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAGTCCTTGCCTTTGCTGCCTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR GCA 72 bp AGGACCCAGGGCTTTGACACAGTAAGTGAAAGAAAGTaGTCGAAGGCCGAGAGGGAAGGGCCCCTCCATACC +
Preference number: 3 (lower is better)
Translates to: RTQGFDTVSERK*SKAEREGPLHT
Trigger: GGTATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTACTGTGTCAAAGCCCTGGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
3UTR-3UTR CAA 90 bp AGGGGAGATCCCGGGTTTGAGGGGCAGTTACGGAAGATGAAGCCCATGCCGGGGGGGTTGAAATGGACTTaGTTCTTGTCAGGACAGGAA +
Preference number: 3 (lower is better)
Translates to: RGDPGFEGQLRKMKPMPGGLKWT*FLSGQE
Trigger: TTCCTGTCCTGACAAGAACAAAGTCCATTTCAACCC...CCCCGGCATGGGCTTCATCTTCCGTAACTGCCCCTCAAACCCGGGATCTCCCCT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR TCA 72 bp GAAGAGGGGCTTCATCAGGTTGACGGGGCAGAAGGCTaGGCCAGTCGGGTTGAAATGGACTTTGTTCTTGTC +
Preference number: 3 (lower is better)
Translates to: EEGLHQVDGAEG*ASRVEMDFVLV
Trigger: GACAAGAACAAAGTCCATTTCAACCCGACTGGCTCAGCCTTCTGCCCCGTCAACCTGATGAAGCCCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503573.5
3UTR GCA 72 bp TCTGTGGCGTCTTCTCTCCTTCGTTCATGGCCAGCTTaGTCTGTGACAAAAATAAGGGCCTCCTATACAGTC +
Preference number: 3 (lower is better)
Translates to: SVASSLLRSWPA*SVTKIRASYTV
Trigger: GACTGTATAGGAGGCCCTTATTTTTGTCACAGAGCAAGCTGGCCATGAACGAAGGAGAGAAGACGCCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240364.7
3UTR TCA 72 bp TACTTAAGACAATCTTTAGTCAGGGTGAAAGCGAGATaGAAATGCCACTTGGGAAAACACTTGTTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: YLRQSLVRVKAR*KCHLGKHLFPP
Trigger: GGGAGGAAACAAGTGTTTTCCCAAGTGGCATTTTCATCTCGCTTTCACCCTGACTAAAGATTGTCTTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp GGGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGGCATGGGACGCTGGCTaGACGGCCACCCCCGTCCCG +
Preference number: 4 (lower is better)
Translates to: GTWGGTCHQGTGLYGKVGAWDAG*TATPVP
Trigger: CGGGACGGGGGTGGCCGTGCAGCCAGCGTCCCATGC...CCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp TGTCGTTGGGGGTGGATGCCAGCTCCTCGGCGGCACCCCGATGTTCCTCATGACCGGATCCTTCCGAGGTaGTGGCCTGGGGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: CRWGWMPAPRRHPDVPHDRILPR*WPGAGR
Trigger: CCGGCCAGCCCCAGGCCACCACCTCGGAAGGATCCG...GTCATGAGGAACATCGGGGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR CCA 90 bp GGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTCCGAGGTGGTGGCCTaGGGCTGGCCGGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GPITFRGAGAHQKEDPGLSEVVA*GWPGEG
Trigger: CCCTTCCCCCGGCCAGCCCCAGGCCACCACCTCGGA...AAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp TGCCCAGCTACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCATCCTTCCGAGGTGGTaGCCTGGGGCTGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: CPATSGEGRSHHVQRGRCILPRW*PGAGRG
Trigger: CCCCCGGCCAGCCCCAGGCCACCACCTCGGAAGGAT...GCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGTAGCTGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTGGGACCCGGATCCTTCCGAGGTaGTGGCCTGGGGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GPATKALVSMVKWGRGGTRILPR*WPGAGR
Trigger: CCGGCCAGCCCCAGGCCACCACCTCGGAAGGATCCG...GGTCCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GGGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGTCCCCACTACCCACCTaGGGCTGGGCGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GTWGGTCHQGTGLYGKVGSPLPT*GWAGWA
Trigger: AGCCCAGCCCGCCCAGCCCCAGGTGGGTAGTGGGGA...CCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp CCTGGAGAGGAGGCTTTGTCGTTGGGGGTGGATGCCAGCTCCTCGGCGGCACCCGGACCTTCTGTGCCCTaGGCTCCTCAGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PGEEALSLGVDASSSAAPGPSVP*APQQLL
Trigger: GAGGAGCTGCTGAGGAGCCCAGGGCACAGAAGGTCC...GGGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGACAAAGCCTCCTCTCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR TCA 90 bp GGGCCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCAGGGGATCGTGGCCCTaGGCGGCTGCAGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GPPIQSFGLTPRGGGLKTRGSWP*AAAAQP
Trigger: GGGCTGGGCTGCAGCCGCTCAGGGCCACGATCCCCT...GGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp GAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTGGGCGGCGCTGGTGCGGCTaGTGCAGCTGGAAGGGGATC +
Preference number: 4 (lower is better)
Translates to: EGPATKALVSMVKWGRGGRRWCG*CSWKGI
Trigger: GATCCCCTTCCAGCTGCAGCAGCCGCACCAGCGCCG...CCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp TGTCGTTGGGGGTGGATGCCAGCTCCTCGGCGGCACCCCGATGTTCCTCATGACGGCAGGGACCTTCTGTaGCCTGGGCTCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CRWGWMPAPRRHPDVPHDGRDLL*PGLLSS
Trigger: GCTGCTGAGGAGCCCAGGGCACAGAAGGTCCCTGCC...GTCATGAGGAACATCGGGGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR CCA 90 bp CCTGGAGAGGAGGCTTTGTCGTTGGGGGTGGATGCCAGCTCCTCGGCGGCACCCGCCAGGCCACAAGGCTaGGGAGATGCCAAGGACATG +
Preference number: 4 (lower is better)
Translates to: PGEEALSLGVDASSSAAPARPQG*GDAKDM
Trigger: CATGTCCTTGGCATCTCCCCAGCCTTGTGGCCTGGC...GGGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGACAAAGCCTCCTCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR TCA 90 bp TGCCCAGCTACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCTGTGCAGGCAGGGGCTaGGTCGCAAGACAGGGGACC +
Preference number: 4 (lower is better)
Translates to: CPATSGEGRSHHVQRGRCCAGRG*VARQGT
Trigger: GGTCCCCTGTCTTGCGACTCAGCCCCTGCCTGCACA...GCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGTAGCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp GGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTGGGACCTGTGCAGGCAGGGGCTaGGTCGCAAGACAGGGGACC +
Preference number: 4 (lower is better)
Translates to: GPATKALVSMVKWGRGGTCAGRG*VARQGT
Trigger: GGTCCCCTGTCTTGCGACTCAGCCCCTGCCTGCACA...GGTCCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GGGCCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCCCGAGCATGGGACGCTaGCTGCACGGCCACCCCCGT +
Preference number: 4 (lower is better)
Translates to: GPPIQSFGLTPRGGGLKTPSMGR*LHGHPR
Trigger: ACGGGGGTGGCCGTGCAGCCAGCGTCCCATGCTCGG...GGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp GGGCCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCTGGGGCCACCGAGCATaGGACGCTGGCTGCACGGCC +
Preference number: 4 (lower is better)
Translates to: GPPIQSFGLTPRGGGLKTWGHRA*DAGCTA
Trigger: GGCCGTGCAGCCAGCGTCCCATGCTCGGTGGCCCCA...GGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp AAGAGGGGCTTCATCAGGTTGACGGGGCAGAAGGCTGAGCCAGTCGGGTTGAAATCCGAGGTGGTGGCCTaGGGCTGGCCGGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KRGFIRLTGQKAEPVGLKSEVVA*GWPGEG
Trigger: CCCTTCCCCCGGCCAGCCCCAGGCCACCACCTCGGA...TTTCAACCCGACTGGCTCAGCCTTCTGCCCCGTCAACCTGATGAAGCCCCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR TCA 90 bp TGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGGGGGCTTCATCAGGTTaGCGGGGCAGAAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: WGGTCHQGTGLYGKVGQGGASSG*RGRRLS
Trigger: GCTCAGCCTTCTGCCCCGTCAACCTGATGAAGCCCC...CCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCA
63% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp GTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTAGGGGACGCCCTCAGTaGTCCCCGCACTGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: VPSRSEGPVPIKKRTQGFRGRPQ*SPHCVV
Trigger: GACCACGCAGTGCGGGGAGCACTGAGGGCGTCCCCT...AAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp GGGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGGGAGCTGGGGCCCGGTaGCCATCAGGGATATCAAGG +
Preference number: 4 (lower is better)
Translates to: GTWGGTCHQGTGLYGKVGGAGAR*PSGISR
Trigger: CCTTGATATCCCTGATGGGCACCGGGCCCCAGCTCC...CCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp GTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGTCGTTGGGGGTGGATaGCAGCTCCTCGGCGGCACC +
Preference number: 4 (lower is better)
Translates to: VPSRSEGPVPIKKRTQGFVVGGG*QLLGGT
Trigger: GGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGAC...AAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp GGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCACCTGGGGAGGGACCTaGCACCAAGGCACTGGTCTC +
Preference number: 4 (lower is better)
Translates to: GPGEGPATKALVSMVKWGTWGGT*HQGTGL
Trigger: GAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGT...GCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp GCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGACCTGGGGAGGGACCTaGCACCAAGGCACTGGTCTC +
Preference number: 4 (lower is better)
Translates to: AGPITFRGAGAHQKEDPGTWGGT*HQGTGL
Trigger: GAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGT...CCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGTCGTTGGGGGTaGATGCCAGCTCCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: AGPITFRGAGAHQKEDPGLCRWG*MPAPRR
Trigger: CCGCCGAGGAGCTGGCATCCACCCCCAACGACAAAG...CCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAAGCGAGTCCGAGGTGGTGGCCTaGGGCTGGCCGGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: AGRAGLLLKTIFSQGESESEVVA*GWPGEG
Trigger: CCCTTCCCCCGGCCAGCCCCAGGCCACCACCTCGGA...CTCGCTTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp CCTGGGGCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAATCCTTCCGAGGTGGTaGCCTGGGGCTGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PGAGRAGLLLKTIFSQGEILPRW*PGAGRG
Trigger: CCCCCGGCCAGCCCCAGGCCACCACCTCGGAAGGAT...TTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp CTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGGAGGCTTATCCTTCCGAGGTGGTaGCCTGGGGCTGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LEMGCHLQERLGVLERRLILPRW*PGAGRG
Trigger: CCCCCGGCCAGCCCCAGGCCACCACCTCGGAAGGAT...AAGCCTCCTCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR CCA 90 bp GGGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCCATCTCAGGGGACCTaGGGAGGGACCTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: GTWGGTCHQGTGLYGKVGPSQGT*GGTCHQ
Trigger: TTGGTGGCAGGTCCCTCCCCAGGTCCCCTGAGATGG...CCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp TTTGTCGTTGGGGGTGGATGCCAGCTCCTCGGCGGCACCCCGATGTTCCTCATGCCTCCAGCTCTTGGTTaGGCCCTTCCAGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FVVGGGCQLLGGTPMFLMPPALG*ALPGSC
Trigger: ACAGGAGCCTGGAAGGGCTCAACCAAGAGCTGGAGG...CATGAGGAACATCGGGGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR TCA 90 bp GGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCCCTCCAGCTCTTGGTTaGGCCCTTCCAGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GPGEGPATKALVSMVKWGPPALG*ALPGSC
Trigger: ACAGGAGCCTGGAAGGGCTCAACCAAGAGCTGGAGG...GCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp GAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTGGGAAGCACAGGCTCTTCTaGTGGTGGGGTGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: EGPATKALVSMVKWGRGGKHRLF*WWGALP
Trigger: TGGCAGCGCACCCCACCATCAGAAGAGCCTGTGCTT...CCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp TCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGACACAGCTCTCCCGGCTGCCTaGCTCAGCCCCACTGCGAGA +
Preference number: 4 (lower is better)
Translates to: SRSEGPVPIKKRTQGFDTALPAA*LSPTAR
Trigger: TCTCGCAGTGGGGCTGAGGCAGGCAGCCGGGAGAGC...TGTGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp TGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTTCGGTGGTCTGTGCTaGCCCAGGATGCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: WGGTCHQGTGLYGKVGQGFGGLC*PRMLSA
Trigger: AGCGCTCAGCATCCTGGGGCAGCACAGACCACCGAA...CCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp CCTGGGGCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAAGGGGACGCCCTCAGTaGTCCCCGCACTGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: PGAGRAGLLLKTIFSQGERGRPQ*SPHCVV
Trigger: GACCACGCAGTGCGGGGAGCACTGAGGGCGTCCCCT...TTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp GAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTGGGGGGGATGATCACAGCTaGCACTCTGGGGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: EGPATKALVSMVKWGRGGGDDHS*HSGEEL
Trigger: CAGCTCCTCCCCAGAGTGGCAGCTGTGATCATCCCC...CCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp GGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTGGGACCGAGAGCTGGCAAGGTTaGCAGGCTCCAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GPATKALVSMVKWGRGGTESWQG*QAPGGG
Trigger: TCCTCCTCCTGGAGCCTGGCAACCTTGCCAGCTCTC...GGTCCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp AAGAGGGGCTTCATCAGGTTGACGGGGCAGAAGGCTGAGCCAGTCGGGTTGAAAGTCGTTGGGGGTGGATaGCAGCTCCTCGGCGGCACC +
Preference number: 4 (lower is better)
Translates to: KRGFIRLTGQKAEPVGLKVVGGG*QLLGGT
Trigger: GGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGAC...TTTCAACCCGACTGGCTCAGCCTTCTGCCCCGTCAACCTGATGAAGCCCCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR GCA 90 bp GGGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGGATGGTGGGGTGCGCTaGCATGGCTCGAATGGCAGT +
Preference number: 4 (lower is better)
Translates to: GTWGGTCHQGTGLYGKVGDGGVR*HGSNGS
Trigger: ACTGCCATTCGAGCCATGGCAGCGCACCCCACCATC...CCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp TGTCGTTGGGGGTGGATGCCAGCTCCTCGGCGGCACCCCGATGTTCCTCATGACACCTCCTCCAGCTCTTaGTTGAGCCCTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CRWGWMPAPRRHPDVPHDTSSSS*LSPSRL
Trigger: GAGCCTGGAAGGGCTCAACCAAGAGCTGGAGGAGGT...GTCATGAGGAACATCGGGGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR CCA 90 bp GGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTGGGACCGCCAGGCCACAAGGCTaGGGAGATGCCAAGGACATG +
Preference number: 4 (lower is better)
Translates to: GPATKALVSMVKWGRGGTARPQG*GDAKDM
Trigger: CATGTCCTTGGCATCTCCCCAGCCTTGTGGCCTGGC...GGTCCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp CTGGGGCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAACGGATCCTTCCGAGGTaGTGGCCTGGGGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LGLGGLGCYLRQSLVRVKRILPR*WPGAGR
Trigger: CCGGCCAGCCCCAGGCCACCACCTCGGAAGGATCCG...TTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp CAGCTACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATGCAGTGGGGAGGCCTTaGAGGCTTCCGGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: QLLVEKAGPITFRGAGAHAVGRP*RLPDPS
Trigger: GGAAGGATCCGGAAGCCTCCAAGGCCTCCCCACTGC...ATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGTAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp CAGCTACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATTGGGGTGCGCTGCCATaGCTCGAATGGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QLLVEKAGPITFRGAGAHWGALP*LEWQWG
Trigger: TCCCCACTGCCATTCGAGCCATGGCAGCGCACCCCA...ATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGTAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp GGGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCTGAGGCCTACACACTaGCTTTTCTGGGGCCACCGA +
Preference number: 4 (lower is better)
Translates to: GTWGGTCHQGTGLYGKVGLRPTH*LFWGHR
Trigger: TCGGTGGCCCCAGAAAAGTCAGTGTGTAGGCCTCAG...CCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp TGCCCAGCTACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCTGAGGCCTACACACTaGCTTTTCTGGGGCCACCGA +
Preference number: 4 (lower is better)
Translates to: CPATSGEGRSHHVQRGRCLRPTH*LFWGHR
Trigger: TCGGTGGCCCCAGAAAAGTCAGTGTGTAGGCCTCAG...GCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGTAGCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp CTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGGAGGCTTTGTGCAGGCAGGGGCTaGGTCGCAAGACAGGGGACC +
Preference number: 4 (lower is better)
Translates to: LEMGCHLQERLGVLERRLCAGRG*VARQGT
Trigger: GGTCCCCTGTCTTGCGACTCAGCCCCTGCCTGCACA...AAGCCTCCTCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR TCA 90 bp AGGGGAGATCCCGGGTTTGAGGGGCAGTTACGGAAGATGAAGCCCATGCCGGGGGGCAGTTACGGAAGATaGAGCCCATGCCGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: RGDPGFEGQLRKMKPMPGGSYGR*SPCRGR
Trigger: TCTTCCCCGGCATGGGCTTCATCTTCCGTAACTGCC...CCCCGGCATGGGCTTCATCTTCCGTAACTGCCCCTCAAACCCGGGATCTCCCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR TCA 90 bp TGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGGGCAGTTACGGAAGATaGAGCCCATGCCGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: WGGTCHQGTGLYGKVGQGGSYGR*SPCRGR
Trigger: TCTTCCCCGGCATGGGCTTCATCTTCCGTAACTGCC...CCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp GCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGGGGAGATCCCGGGTTTaGGGGGCAGTTACGGAAGAT +
Preference number: 4 (lower is better)
Translates to: AGPITFRGAGAHQKEDPGGRSRV*GAVTED
Trigger: ATCTTCCGTAACTGCCCCTCAAACCCGGGATCTCCC...CCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp GGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCTACAGTCATTTGGACTaGCACCCAGGGGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GPGEGPATKALVSMVKWGYSHLD*HPGVGD
Trigger: GTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTA...GCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp GTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGGAGCTGGGGCCCGGTaGCCATCAGGGATATCAAGG +
Preference number: 4 (lower is better)
Translates to: VPSRSEGPVPIKKRTQGFGAGAR*PSGISR
Trigger: CCTTGATATCCCTGATGGGCACCGGGCCCCAGCTCC...AAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp GGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTGATGGTGGGGTGCGCTaGCATGGCTCGAATGGCAGT +
Preference number: 4 (lower is better)
Translates to: GPITFRGAGAHQKEDPGLDGGVR*HGSNGS
Trigger: ACTGCCATTCGAGCCATGGCAGCGCACCCCACCATC...AAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp TGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGCTTCTGATGGTGGGGTaGGCTGCCATGGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: WGGTCHQGTGLYGKVGQGLLMVG*AAMARM
Trigger: CATTCGAGCCATGGCAGCGCACCCCACCATCAGAAG...CCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp TGTCGTTGGGGGTGGATGCCAGCTCCTCGGCGGCACCCCGATGTTCCTCATGACACATGGAAGGAGAGCTaGCAAGGTTGCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: CRWGWMPAPRRHPDVPHDTWKES*QGCQAP
Trigger: TGGAGCCTGGCAACCTTGCCAGCTCTCCTTCCATGT...GTCATGAGGAACATCGGGGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR CCA 90 bp GGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTGCCAGGCCACAAGGCTaGGGAGATGCCAAGGACATG +
Preference number: 4 (lower is better)
Translates to: GPITFRGAGAHQKEDPGLARPQG*GDAKDM
Trigger: CATGTCCTTGGCATCTCCCCAGCCTTGTGGCCTGGC...AAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGAGGCTTTGTCGTTaGGGGTGGATGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPGEGPATKALVSMVKWGRRLCR*GWMPAP
Trigger: AGGAGCTGGCATCCACCCCCAACGACAAAGCCTCCT...GCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GAGAGGAGGCTTTGTCGTTGGGGGTGGATGCCAGCTCCTCGGCGGCACCCCGATCAGGACCTGGAGACGTaGCTTCTTCAAACACACGCA +
Preference number: 4 (lower is better)
Translates to: ERRLCRWGWMPAPRRHPDQDLET*LLQTHA
Trigger: TGCGTGTGTTTGAAGAAGCCACGTCTCCAGGTCCTG...ATCGGGGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGACAAAGCCTCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR TCA 90 bp TCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGACACAGCTGCCCCAGGATGCTaGGCGCTTGTGTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SRSEGPVPIKKRTQGFDTAAPGC*ALVCTG
Trigger: TCCTGTGCACACAAGCGCTCAGCATCCTGGGGCAGC...TGTGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp AGGCAAGGACTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGGGGGCTTCATCAGGTTaGCGGGGCAGAAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RQGLEMGCHLQERLGVLEGASSG*RGRRLS
Trigger: GCTCAGCCTTCTGCCCCGTCAACCTGATGAAGCCCC...CTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAGTCCTTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR TCA 90 bp GGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCGCAGGTACACAGGTGTaGATTGTGAGCTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPGEGPATKALVSMVKWGAGTQV*IVSCPA
Trigger: AGCTGGGCAGCTCACAATTCACACCTGTGTACCTGC...GCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp CAGCTACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCTTTTCGGTGGTCTGTaGTGCCCCAGGATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QLLVEKAGPITFRGAGAHLFGGL*CPRMLS
Trigger: GCTCAGCATCCTGGGGCAGCACAGACCACCGAAAAG...ATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp AGGCAAGGACTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGGGAGCTGGGGCCCGGTaGCCATCAGGGATATCAAGG +
Preference number: 4 (lower is better)
Translates to: RQGLEMGCHLQERLGVLEGAGAR*PSGISR
Trigger: CCTTGATATCCCTGATGGGCACCGGGCCCCAGCTCC...CTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAGTCCTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR GCA 90 bp GTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGGGGATGATCACAGCTaGCACTCTGGGGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VPSRSEGPVPIKKRTQGFGDDHS*HSGEEL
Trigger: CAGCTCCTCCCCAGAGTGGCAGCTGTGATCATCCCC...AAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp GGGCCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCGAGAGCTGGCAAGGTTaGCAGGCTCCAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GPPIQSFGLTPRGGGLKTESWQG*QAPGGG
Trigger: TCCTCCTCCTGGAGCCTGGCAACCTTGCCAGCTCTC...GGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp TCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGACACAGCTCCCCGCACTGCGTaGTCCCCTAGGAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: SRSEGPVPIKKRTQGFDTAPRTA*SPRSGE
Trigger: TTCACCACTCCTAGGGGACCACGCAGTGCGGGGAGC...TGTGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTGGGACATGGAAGGAGAGCTaGCAAGGTTGCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EGPATKALVSMVKWGRGGTWKES*QGCQAP
Trigger: TGGAGCCTGGCAACCTTGCCAGCTCTCCTTCCATGT...CCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp CTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGGAGGCTTCTTTGTCGTTGGGGGTaGATGCCAGCTCCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: LEMGCHLQERLGVLERRLLCRWG*MPAPRR
Trigger: CCGCCGAGGAGCTGGCATCCACCCCCAACGACAAAG...AAGCCTCCTCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR CCA 90 bp TGCCCAGCTACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCGGCCAGGTCAGGACCTaGAGACGTGGCTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: CPATSGEGRSHHVQRGRCGQVRT*RRGFFK
Trigger: TTTGAAGAAGCCACGTCTCCAGGTCCTGACCTGGCC...GCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGTAGCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp TGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGGGCCAGGTCAGGACCTaGAGACGTGGCTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: WGGTCHQGTGLYGKVGQGGQVRT*RRGFFK
Trigger: TTTGAAGAAGCCACGTCTCCAGGTCCTGACCTGGCC...CCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTTGGCTCGAATGGCAGTaGGGAGGCCTTGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VPSRSEGPVPIKKRTQGFWLEWQ*GGLGGF
Trigger: GAAGCCTCCAAGGCCTCCCCACTGCCATTCGAGCCA...AAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp AGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATACCCCATCTCCATCTCAGGGGACCTaGGGAGGGACCTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: SERKCSKAEREGPLHTPSPSQGT*GGTCHQ
Trigger: TTGGTGGCAGGTCCCTCCCCAGGTCCCCTGAGATGG...AGATGGGGTATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGTCGCCATTTGCCACCTaGAGGAATGCCAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: AGPITFRGAGAHQKEDPGSPFAT*RNASSP
Trigger: AGGAGAGCTGGCATTCCTCCAGGTGGCAAATGGCGA...CCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp GCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGTCCGGGTTCCACCACTaGAGTCACTTTCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: AGPITFRGAGAHQKEDPGSGFHH*SHFLPN
Trigger: GTTGGGCAGAAAGTGACTCCAGTGGTGGAACCCGGA...CCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513602.5
CDS-3UTR TCA 90 bp GCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAAGCGAGGCTGCCCCAGGATGCTaGGCGCTTGTGTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: AGRAGLLLKTIFSQGESEAAPGC*ALVCTG
Trigger: TCCTGTGCACACAAGCGCTCAGCATCCTGGGGCAGC...CTCGCTTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR TCA 90 bp ACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAACCTCCAGCTCTTGGTTaGGCCCTTCCAGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TSGEGRSHHVQRGRCPSKPPALG*ALPGSC
Trigger: ACAGGAGCCTGGAAGGGCTCAACCAAGAGCTGGAGG...TTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp CTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGGAGGCTTGACGGGGCAGAAGGCTaGGCCAGTCGGGTTGAAATG +
Preference number: 4 (lower is better)
Translates to: LEMGCHLQERLGVLERRLDGAEG*ASRVEM
Trigger: CATTTCAACCCGACTGGCTCAGCCTTCTGCCCCGTC...AAGCCTCCTCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR TCA 90 bp TCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGACACAGACGGGGCAGAAGGCTaGGCCAGTCGGGTTGAAATG +
Preference number: 4 (lower is better)
Translates to: SRSEGPVPIKKRTQGFDTDGAEG*ASRVEM
Trigger: CATTTCAACCCGACTGGCTCAGCCTTCTGCCCCGTC...TGTGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp GTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGGCAGTTACGGAAGATaGAGCCCATGCCGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VPSRSEGPVPIKKRTQGFGSYGR*SPCRGR
Trigger: TCTTCCCCGGCATGGGCTTCATCTTCCGTAACTGCC...AAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp CCTGGGGCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAAAGCACAGGCTCTTCTaGTGGTGGGGTGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PGAGRAGLLLKTIFSQGEKHRLF*WWGALP
Trigger: TGGCAGCGCACCCCACCATCAGAAGAGCCTGTGCTT...TTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR TCA 90 bp GGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTGCAGGTACACAGGTGTaGATTGTGAGCTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPITFRGAGAHQKEDPGLAGTQV*IVSCPA
Trigger: AGCTGGGCAGCTCACAATTCACACCTGTGTACCTGC...AAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp AAGAGGGGCTTCATCAGGTTGACGGGGCAGAAGGCTGAGCCAGTCGGGTTGAAAGGGGATGATCACAGCTaGCACTCTGGGGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KRGFIRLTGQKAEPVGLKGDDHS*HSGEEL
Trigger: CAGCTCCTCCCCAGAGTGGCAGCTGTGATCATCCCC...TTTCAACCCGACTGGCTCAGCCTTCTGCCCCGTCAACCTGATGAAGCCCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR GCA 90 bp GTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGTTCAGAGGGGCCGGTaGCCATCAAAAAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: VPSRSEGPVPIKKRTQGFVQRGR*PSKRGP
Trigger: GGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAAC...AAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp ACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAACAGGGGCGTCTGGGTaGCCTTGTCATTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TSGEGRSHHVQRGRCPSKTGASG*PCHWCS
Trigger: GCTGCACCAATGACAAGGCCACCCAGACGCCCCTGT...TTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp TCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGACACACAGGACAGGGGCGTCTaGGTGGCCTTGTCATTGGTG +
Preference number: 4 (lower is better)
Translates to: SRSEGPVPIKKRTQGFDTQDRGV*VALSLV
Trigger: CACCAATGACAAGGCCACCCAGACGCCCCTGTCCTG...TGTGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp CCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCTTCGCTCCCCGCACTGCGTaGTCCCCTAGGAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: PPIQSFGLTPRGGGLKTFAPRTA*SPRSGE
Trigger: TTCACCACTCCTAGGGGACCACGCAGTGCGGGGAGC...GAAGGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp GTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTACCTCCTCCAGCTCTTaGTTGAGCCCTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VPSRSEGPVPIKKRTQGFTSSSS*LSPSRL
Trigger: GAGCCTGGAAGGGCTCAACCAAGAGCTGGAGGAGGT...AAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GACACAGTAAGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATCTTTGTCGTTGGGGGTaGATGCCAGCTCCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: DTVSERKCSKAEREGPLHLCRWG*MPAPRR
Trigger: CCGCCGAGGAGCTGGCATCCACCCCCAACGACAAAG...ATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTACTGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTGGGACCCAGGACCTGGAGACGTaGCTTCTTCAAACACACGCA +
Preference number: 4 (lower is better)
Translates to: GPATKALVSMVKWGRGGTQDLET*LLQTHA
Trigger: TGCGTGTGTTTGAAGAAGCCACGTCTCCAGGTCCTG...GGTCCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCAGGACCTGGAGACGTaGCTTCTTCAAACACACGCA +
Preference number: 4 (lower is better)
Translates to: AGPITFRGAGAHQKEDPGQDLET*LLQTHA
Trigger: TGCGTGTGTTTGAAGAAGCCACGTCTCCAGGTCCTG...CCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GACACAGTAAGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATTGGGGTGCGCTGCCATaGCTCGAATGGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: DTVSERKCSKAEREGPLHWGALP*LEWQWG
Trigger: TCCCCACTGCCATTCGAGCCATGGCAGCGCACCCCA...ATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTACTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp CTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGGAGGCTTGGGAGATCCCGGGTTTaGGGGGCAGTTACGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LEMGCHLQERLGVLERRLGRSRV*GAVTED
Trigger: ATCTTCCGTAACTGCCCCTCAAACCCGGGATCTCCC...AAGCCTCCTCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR GCA 90 bp CATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGACAGTTCAGAGGGGCCGGTaGCCATCAAAAAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: HHVQRGRCPSKRGPRALTVQRGR*PSKRGP
Trigger: GGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAAC...TGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GACACAGTAAGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATACAGGGGCGTCTGGGTaGCCTTGTCATTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: DTVSERKCSKAEREGPLHTGASG*PCHWCS
Trigger: GCTGCACCAATGACAAGGCCACCCAGACGCCCCTGT...ATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTACTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp CAGCTACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATTGTGTGCACAGGAACTaGCACGCTCACCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: QLLVEKAGPITFRGAGAHCVHRN*HAHLLA
Trigger: AGCTAGAAGGTGAGCGTGCCAGTTCCTGTGCACACA...ATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GGGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGGAAATCTCTTTTCGGTaGTCTGTGCTGCCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GTWGGTCHQGTGLYGKVGEISFR*SVLPQD
Trigger: ATCCTGGGGCAGCACAGACCACCGAAAAGAGATTTC...CCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp CTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGGAGGCTTAGGAGGCTTTGTCGTTaGGGGTGGATGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LEMGCHLQERLGVLERRLRRLCR*GWMPAP
Trigger: AGGAGCTGGCATCCACCCCCAACGACAAAGCCTCCT...AAGCCTCCTCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR CCA 90 bp GGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTGGGACCGGCAAGGACTGGAGATaGGCTGCCATCTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: GPATKALVSMVKWGRGGTGKDWR*AAIFKK
Trigger: TTTCTTGAAGATGGCAGCCCATCTCCAGTCCTTGCC...GGTCCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp CTGGGGCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAATGGCTCGAATGGCAGTaGGGAGGCCTTGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGLGGLGCYLRQSLVRVKWLEWQ*GGLGGF
Trigger: GAAGCCTCCAAGGCCTCCCCACTGCCATTCGAGCCA...TTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp TGCCCAGCTACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCACCATCAGGGAGCTCTaGAAAAGCACAGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CPATSGEGRSHHVQRGRCTIREL*KSTGSS
Trigger: AGAAGAGCCTGTGCTTTTCCAGAGCTCCCTGATGGT...GCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGTAGCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp GGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTCCGTTAGGGCTGCTTTaGTCAGCTCCTCCAATGAGA +
Preference number: 4 (lower is better)
Translates to: GPITFRGAGAHQKEDPGLPLGLL*SAPPMR
Trigger: TCTCATTGGAGGAGCTGACCAAAGCAGCCCTAACGG...AAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp GGGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGTGCCCAACTTCAAAATaGCGCCCACTAGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GTWGGTCHQGTGLYGKVGCPTSK*RPLASP
Trigger: TGGTGAAGCTAGTGGGCGCCATTTTGAAGTTGGGCA...CCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513602.5
CDS-3UTR TCA 90 bp TTTGTCGTTGGGGGTGGATGCCAGCTCCTCGGCGGCACCCCGATGTTCCTCATGCTGAGCCAGTCGGGTTaGAATGGACTTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: FVVGGGCQLLGGTPMFLMLSQSG*NGLCSC
Trigger: ACAAGAACAAAGTCCATTTCAACCCGACTGGCTCAG...CATGAGGAACATCGGGGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR GCA 90 bp TCGTTCATGGCCAGCTTGCTCTGTGACAAAAATAAGGGCCTCCTATACAGTCATCCGTCCCGGCGCTGGTaGGGCTGCTGCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SFMASLLCDKNKGLLYSHPSRRW*GCCSWK
Trigger: CTTCCAGCTGCAGCAGCCGCACCAGCGCCGGGACGG...ATGACTGTATAGGAGGCCCTTATTTTTGTCACAGAGCAAGCTGGCCATGAACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp GCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAAGCGAGCTTTTCGGTGGTCTGTaGTGCCCCAGGATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AGRAGLLLKTIFSQGESELFGGL*CPRMLS
Trigger: GCTCAGCATCCTGGGGCAGCACAGACCACCGAAAAG...CTCGCTTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp GGGCCCGGTGCCCATCAGGGATATCAAGGATCTGTAGGGCTTGATCAATGTGTTGAGAGCTGGCAAGGTTaGCAGGCTCCAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GPGAHQGYQGSVGLDQCVESWQG*QAPGGG
Trigger: TCCTCCTCCTGGAGCCTGGCAACCTTGCCAGCTCTC...AACACATTGATCAAGCCCTACAGATCCTTGATATCCCTGATGGGCACCGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR GCA 90 bp CCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCTTCCTTCTGATGGTGGGGTaGGCTGCCATGGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: PPIQSFGLTPRGGGLKTFLLMVG*AAMARM
Trigger: CATTCGAGCCATGGCAGCGCACCCCACCATCAGAAG...GAAGGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp GGGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGGTAAGTGAAAGAAAGTaGTCGAAGGCCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GTWGGTCHQGTGLYGKVGVSERK*SKAERE
Trigger: TTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTAC...CCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp CCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCTTCTGCCACCTGGAGGAATaGCAGCTCTCCTCCCCACTA +
Preference number: 4 (lower is better)
Translates to: PPIQSFGLTPRGGGLKTFCHLEE*QLSSPL
Trigger: TAGTGGGGAGGAGAGCTGGCATTCCTCCAGGTGGCA...GAAGGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp GGGCCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCTGTGTGCACAGGAACTaGCACGCTCACCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: GPPIQSFGLTPRGGGLKTCVHRN*HAHLLA
Trigger: AGCTAGAAGGTGAGCGTGCCAGTTCCTGTGCACACA...GGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp GACACAGTAAGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATACCTCCTCCAGCTCTTaGTTGAGCCCTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: DTVSERKCSKAEREGPLHTSSSS*LSPSRL
Trigger: GAGCCTGGAAGGGCTCAACCAAGAGCTGGAGGAGGT...ATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTACTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp AAGAGGGGCTTCATCAGGTTGACGGGGCAGAAGGCTGAGCCAGTCGGGTTGAAAGGCCAGGTCAGGACCTaGAGACGTGGCTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: KRGFIRLTGQKAEPVGLKGQVRT*RRGFFK
Trigger: TTTGAAGAAGCCACGTCTCCAGGTCCTGACCTGGCC...TTTCAACCCGACTGGCTCAGCCTTCTGCCCCGTCAACCTGATGAAGCCCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR GCA 90 bp GACACAGTAAGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATCCTTCTCTTTCCCACTaGGGCTCAGCTTCGTCCTCT +
Preference number: 4 (lower is better)
Translates to: DTVSERKCSKAEREGPLHPSLSH*GSASSS
Trigger: AGAGGACGAAGCTGAGCCGCAGTGGGAAAGAGAAGG...ATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTACTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp AAGAGGGGCTTCATCAGGTTGACGGGGCAGAAGGCTGAGCCAGTCGGGTTGAAAGGACTGGAGATGGGCTaGCATCTTCAAGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KRGFIRLTGQKAEPVGLKGLEMG*HLQERL
Trigger: CAGCCTTTCTTGAAGATGGCAGCCCATCTCCAGTCC...TTTCAACCCGACTGGCTCAGCCTTCTGCCCCGTCAACCTGATGAAGCCCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR GCA 90 bp CATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGACAGGACTGGAGATGGGCTaGCATCTTCAAGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: HHVQRGRCPSKRGPRALTGLEMG*HLQERL
Trigger: CAGCCTTTCTTGAAGATGGCAGCCCATCTCCAGTCC...TGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp GTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTTATAGAGTCGCCATTTaGCACCTGGAGGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: VPSRSEGPVPIKKRTQGFYRVAI*HLEECQ
Trigger: CTGGCATTCCTCCAGGTGGCAAATGGCGACTCTATA...AAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp CCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCTTCACATGGAAGGAGAGCTaGCAAGGTTGCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPIQSFGLTPRGGGLKTFTWKES*QGCQAP
Trigger: TGGAGCCTGGCAACCTTGCCAGCTCTCCTTCCATGT...GAAGGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp TTTGTCGTTGGGGGTGGATGCCAGCTCCTCGGCGGCACCCCGATGTTCCTCATGCCAGTCGGGTTGAAATaGACTTTGTTCTTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: FVVGGGCQLLGGTPMFLMPVGLK*TLFLSG
Trigger: TCCTGACAAGAACAAAGTCCATTTCAACCCGACTGG...CATGAGGAACATCGGGGTGCCGCCGAGGAGCTGGCATCCACCCCCAACGACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR CCA 90 bp AGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATACCCCATCTGGGGGATCTATCTTATaGTCTCCTGGAGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SERKCSKAEREGPLHTPSGGSIL*SPGGEG
Trigger: TCCCTCTCCTCCAGGAGACCATAAGATAGATCCCCC...AGATGGGGTATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp GGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTGTAACTAAAAATGGTTaGCTCCGGGTTCCACCACTG +
Preference number: 4 (lower is better)
Translates to: GPITFRGAGAHQKEDPGLVTKNG*LRVPPL
Trigger: CAGTGGTGGAACCCGGAGCCAACCATTTTTAGTTAC...AAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513602.5
CDS-3UTR TCA 90 bp CTCCTTCGTTCATGGCCAGCTTGCTCTGTGACAAAAATAAGGGCCTCCTATACAGGGGCTTCATCAGGTTaGCGGGGCAGAAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLRSWPACSVTKIRASYTGASSG*RGRRLS
Trigger: GCTCAGCCTTCTGCCCCGTCAACCTGATGAAGCCCC...TGTATAGGAGGCCCTTATTTTTGTCACAGAGCAAGCTGGCCATGAACGAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp GGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCGTCCTCTGCAGTTGTTaGTTCAACTTGGAAATCTCT +
Preference number: 4 (lower is better)
Translates to: GPGEGPATKALVSMVKWGVLCSC*FNLEIS
Trigger: AGAGATTTCCAAGTTGAAGCAACAACTGCAGAGGAC...GCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp GGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTCGTTCATGGCCAGCTTaGTCTGTGACAAAAATAAGG +
Preference number: 4 (lower is better)
Translates to: GPITFRGAGAHQKEDPGLRSWPA*SVTKIR
Trigger: CCTTATTTTTGTCACAGAGCAAGCTGGCCATGAACG...AAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp AGGCATTTTTCTAATCCATCCAGCCCTGGGGCGGGCGGAGAGTATAGAGTCGCCCTGGGCGGGCTGGGCTaGTACTTAAGACAATCTTTA +
Preference number: 4 (lower is better)
Translates to: RHFSNPSSPGAGGEYRVALGGLG*YLRQSL
Trigger: TAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAG...GGCGACTCTATACTCTCCGCCCGCCCCAGGGCTGGATGGATTAGAAAAATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp AAGAGGGGCTTCATCAGGTTGACGGGGCAGAAGGCTGAGCCAGTCGGGTTGAAAGGCAAGGACTGGAGATaGGCTGCCATCTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: KRGFIRLTGQKAEPVGLKGKDWR*AAIFKK
Trigger: TTTCTTGAAGATGGCAGCCCATCTCCAGTCCTTGCC...TTTCAACCCGACTGGCTCAGCCTTCTGCCCCGTCAACCTGATGAAGCCCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR CCA 90 bp AGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATACCCCATCTGGCAAGGACTGGAGATaGGCTGCCATCTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SERKCSKAEREGPLHTPSGKDWR*AAIFKK
Trigger: TTTCTTGAAGATGGCAGCCCATCTCCAGTCCTTGCC...AGATGGGGTATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp CATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGACAACCATCAGGGAGCTCTaGAAAAGCACAGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HHVQRGRCPSKRGPRALTTIREL*KSTGSS
Trigger: AGAAGAGCCTGTGCTTTTCCAGAGCTCCCTGATGGT...TGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp AGGCATTTTTCTAATCCATCCAGCCCTGGGGCGGGCGGAGAGTATAGAGTCGCCCTGAGCCAGTCGGGTTaGAATGGACTTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RHFSNPSSPGAGGEYRVALSQSG*NGLCSC
Trigger: ACAAGAACAAAGTCCATTTCAACCCGACTGGCTCAG...GGCGACTCTATACTCTCCGCCCGCCCCAGGGCTGGATGGATTAGAAAAATGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR TCA 90 bp CATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGACACTGAGCCAGTCGGGTTaGAATGGACTTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: HHVQRGRCPSKRGPRALTLSQSG*NGLCSC
Trigger: ACAAGAACAAAGTCCATTTCAACCCGACTGGCTCAG...TGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR TCA 90 bp CTCCTTCGTTCATGGCCAGCTTGCTCTGTGACAAAAATAAGGGCCTCCTATACAGACGGGGCAGAAGGCTaGGCCAGTCGGGTTGAAATG +
Preference number: 4 (lower is better)
Translates to: LLRSWPACSVTKIRASYTDGAEG*ASRVEM
Trigger: CATTTCAACCCGACTGGCTCAGCCTTCTGCCCCGTC...TGTATAGGAGGCCCTTATTTTTGTCACAGAGCAAGCTGGCCATGAACGAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR TCA 90 bp GGGCCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCAGGGTGAAAGCGAGATaGAAATGCCACTTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GPPIQSFGLTPRGGGLKTRVKAR*KCHLGK
Trigger: TTTTCCCAAGTGGCATTTTCATCTCGCTTTCACCCT...GGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR TCA 90 bp AAGAGGGGCTTCATCAGGTTGACGGGGCAGAAGGCTGAGCCAGTCGGGTTGAAAAGGATCTGTAGGGCTTaGTCAATGTGTTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KRGFIRLTGQKAEPVGLKRICRA*SMCCPH
Trigger: ATGGGGACAACACATTGATCAAGCCCTACAGATCCT...TTTCAACCCGACTGGCTCAGCCTTCTGCCCCGTCAACCTGATGAAGCCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR GCA 90 bp AGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATACCCCATCTGTAAGTGAAAGAAAGTaGTCGAAGGCCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SERKCSKAEREGPLHTPSVSERK*SKAERE
Trigger: TTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTAC...AGATGGGGTATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp ACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAACTGGAGTCACTTTCTaGCCAACTTCAAAATGGCGC +
Preference number: 4 (lower is better)
Translates to: TSGEGRSHHVQRGRCPSKTGVTF*PTSKWR
Trigger: GCGCCATTTTGAAGTTGGGCAGAAAGTGACTCCAGT...TTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513602.5
CDS-3UTR CCA 90 bp GCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAAGCGAGTCCTATACAGTCATTTaGACTGACACCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AGRAGLLLKTIFSQGESESYTVI*TDTQGW
Trigger: CCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGA...CTCGCTTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp CCTGGGGCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAATAGGGCTGAGAGGATaGGGGATCTATCTTATGGTC +
Preference number: 4 (lower is better)
Translates to: PGAGRAGLLLKTIFSQGEIGLRG*GIYLMV
Trigger: GACCATAAGATAGATCCCCCATCCTCTCAGCCCTAT...TTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp CTCTACATCGATACAAGAAAAATAGGCATTTTTCTAATCCATCCAGCCCTGGGGCGCTGGTGCGGCTGCTaGAGCTGGAAGGGGATCGTG +
Preference number: 4 (lower is better)
Translates to: LYIDTRKIGIFLIHPALGRWCGC*SWKGIV
Trigger: CACGATCCCCTTCCAGCTGCAGCAGCCGCACCAGCG...CCCCAGGGCTGGATGGATTAGAAAAATGCCTATTTTTCTTGTATCGATGTAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp CTCCTTCGTTCATGGCCAGCTTGCTCTGTGACAAAAATAAGGGCCTCCTATACACCTTCTCTTTCCCACTaGGGCTCAGCTTCGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLRSWPACSVTKIRASYTPSLSH*GSASSS
Trigger: AGAGGACGAAGCTGAGCCGCAGTGGGAAAGAGAAGG...TGTATAGGAGGCCCTTATTTTTGTCACAGAGCAAGCTGGCCATGAACGAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp GACACAGTAAGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATCCAGTCGGGTTGAAATaGACTTTGTTCTTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: DTVSERKCSKAEREGPLHPVGLK*TLFLSG
Trigger: TCCTGACAAGAACAAAGTCCATTTCAACCCGACTGG...ATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTACTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CCA 90 bp CTGGGGCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAATATCTTATGGTCTCCTaGAGGAGAGGGAAGGAAATC +
Preference number: 4 (lower is better)
Translates to: LGLGGLGCYLRQSLVRVKYLMVS*RRGKEI
Trigger: GATTTCCTTCCCTCTCCTCCAGGAGACCATAAGATA...TTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp CTCTACATCGATACAAGAAAAATAGGCATTTTTCTAATCCATCCAGCCCTGGGGTTCGGTGGTCTGTGCTaGCCCAGGATGCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LYIDTRKIGIFLIHPALGFGGLC*PRMLSA
Trigger: AGCGCTCAGCATCCTGGGGCAGCACAGACCACCGAA...CCCCAGGGCTGGATGGATTAGAAAAATGCCTATTTTTCTTGTATCGATGTAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp CCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCTTCGTCCTCTGCAGTTGTTaGTTCAACTTGGAAATCTCT +
Preference number: 4 (lower is better)
Translates to: PPIQSFGLTPRGGGLKTFVLCSC*FNLEIS
Trigger: AGAGATTTCCAAGTTGAAGCAACAACTGCAGAGGAC...GAAGGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR GCA 90 bp CTCCTTCGTTCATGGCCAGCTTGCTCTGTGACAAAAATAAGGGCCTCCTATACAGGACTGGAGATGGGCTaGCATCTTCAAGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLRSWPACSVTKIRASYTGLEMG*HLQERL
Trigger: CAGCCTTTCTTGAAGATGGCAGCCCATCTCCAGTCC...TGTATAGGAGGCCCTTATTTTTGTCACAGAGCAAGCTGGCCATGAACGAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp AGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATACCCCATCTGTTGTTGCTTCAACTTaGAAATCTCTTTTCGGTGGT +
Preference number: 4 (lower is better)
Translates to: SERKCSKAEREGPLHTPSVVAST*KSLFGG
Trigger: ACCACCGAAAAGAGATTTCCAAGTTGAAGCAACAAC...AGATGGGGTATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR GCA 90 bp GGGCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAAGCGCAAACTTCAAACAGCTaGAAAAATAGTGTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GLGGLGCYLRQSLVRVKAQTSNS*KNSVFG
Trigger: CCCAAAGACACTATTTTTGCAGCTGTTTGAAGTTTG...CGCTTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp ATTGGTCAAGTGTTATGGCCCGTTAGGGCTGCTTTGGTCAGCTCCTCCAATGAGCCAGTCGGGTTGAAATaGACTTTGTTCTTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: IGQVLWPVRAALVSSSNEPVGLK*TLFLSG
Trigger: TCCTGACAAGAACAAAGTCCATTTCAACCCGACTGG...CTCATTGGAGGAGCTGACCAAAGCAGCCCTAACGGGCCATAACACTTGACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp CTCCTTCGTTCATGGCCAGCTTGCTCTGTGACAAAAATAAGGGCCTCCTATACATCTCTCCTTCGTTCATaGCCAGCTTGCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: LLRSWPACSVTKIRASYTSLLRS*PACSVT
Trigger: TGTCACAGAGCAAGCTGGCCATGAACGAAGGAGAGA...TGTATAGGAGGCCCTTATTTTTGTCACAGAGCAAGCTGGCCATGAACGAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp TCGTTCATGGCCAGCTTGCTCTGTGACAAAAATAAGGGCCTCCTATACAGTCATGAAATCTCTTTTCGGTaGTCTGTGCTGCCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SFMASLLCDKNKGLLYSHEISFR*SVLPQD
Trigger: ATCCTGGGGCAGCACAGACCACCGAAAAGAGATTTC...ATGACTGTATAGGAGGCCCTTATTTTTGTCACAGAGCAAGCTGGCCATGAACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp GCTGAATTGGTCAAGTGTTATGGCCCGTTAGGGCTGCTTTGGTCAGCTCCTCCAGTTGTTGCTTCAACTTaGAAATCTCTTTTCGGTGGT +
Preference number: 4 (lower is better)
Translates to: AELVKCYGPLGLLWSAPPVVAST*KSLFGG
Trigger: ACCACCGAAAAGAGATTTCCAAGTTGAAGCAACAAC...TGGAGGAGCTGACCAAAGCAGCCCTAACGGGCCATAACACTTGACCAATTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CCA 90 bp CTCTACATCGATACAAGAAAAATAGGCATTTTTCTAATCCATCCAGCCCTGGGGATTGGTCAAGTGTTATaGCCCGTTAGGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LYIDTRKIGIFLIHPALGIGQVL*PVRAAL
Trigger: CAAAGCAGCCCTAACGGGCCATAACACTTGACCAAT...CCCCAGGGCTGGATGGATTAGAAAAATGCCTATTTTTCTTGTATCGATGTAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS GCA 90 bp TACAGAGGCCGCCACGGAGCCCGCCGGAGCCACCGTTCCTGCTGCTaGCGCCGCTGCCCGAATCGGAACCGTCGGGCCGCAGCCGCCGGC +
Preference number: 5 (lower is better)
Translates to: YRGRHGARRSHRSCC*RRCPNRNRRAAAAG
Trigger: GCCGGCGGCTGCGGCCCGACGGTTCCGATTCGGGCAGCGGCGGCAGCAGCAGGAACGGTGGCTCCGGCGGGCTCCGTGGCGGCCTCTGTA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS GCA 90 bp ACGCTGGCTGCACGGCCACCCCCGTCCCGGCGCTGGTGCGGCTGCTaGAGCTGGAAGGGGATCGTGGCCCTGAGCGGCTGCAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: TLAARPPPSRRWCGC*SWKGIVALSGCSPA
Trigger: GGCTGGGCTGCAGCCGCTCAGGGCCACGATCCCCTTCCAGCTGCAGCAGCCGCACCAGCGCCGGGACGGGGGTGGCCGTGCAGCCAGCGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000506156.1
CDS GCA 90 bp GGGACGCTGGCTGCACGGCCACCCCCGTCCCGGCGCTGGTGCGGCTaGTGCAGCTGGAAGGGGATCGTGGCCCTGAGCGGCTGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: GTLAARPPPSRRWCG*CSWKGIVALSGCSP
Trigger: TGGGCTGCAGCCGCTCAGGGCCACGATCCCCTTCCAGCTGCAGCAGCCGCACCAGCGCCGGGACGGGGGTGGCCGTGCAGCCAGCGTCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000506156.1
CDS GCA 90 bp GAGCATGGGACGCTGGCTGCACGGCCACCCCCGTCCCGGCGCTGGTaGGGCTGCTGCAGCTGGAAGGGGATCGTGGCCCTGAGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: EHGTLAARPPPSRRW*GCCSWKGIVALSGC
Trigger: GCAGCCGCTCAGGGCCACGATCCCCTTCCAGCTGCAGCAGCCGCACCAGCGCCGGGACGGGGGTGGCCGTGCAGCCAGCGTCCCATGCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000506156.1
CDS CCA 90 bp ACCGAGCATGGGACGCTGGCTGCACGGCCACCCCCGTCCCGGCGCTaGTGCGGCTGCTGCAGCTGGAAGGGGATCGTGGCCCTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: TEHGTLAARPPPSRR*CGCCSWKGIVALSG
Trigger: GCCGCTCAGGGCCACGATCCCCTTCCAGCTGCAGCAGCCGCACCAGCGCCGGGACGGGGGTGGCCGTGCAGCCAGCGTCCCATGCTCGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000506156.1
CDS TCA 90 bp CCTCTCTGGCCCGTAACGTCAGGTGACGCGAGACCCAGCCGGAAGTaGAGGAAAAAGCGCTTCAGCCCGCGGCGCCTGCGCAGAACGCTC +
Preference number: 5 (lower is better)
Translates to: PLWPVTSGDARPSRK*RKKRFSPRRLRRTL
Trigger: GAGCGTTCTGCGCAGGCGCCGCGGGCTGAAGCGCTTTTTCCTTCACTTCCGGCTGGGTCTCGCGTCACCTGACGTTACGGGCCAGAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS TCA 90 bp GCCAGGACAGGGGCGTCTGGGTGGCCTTGTCATTGGTGCAGCAGGTaGAGGCCCCATCAGCATCTCGTGGCCACTGGCCCAGAAGGTAGG +
Preference number: 5 (lower is better)
Translates to: ARTGASGWPCHWCSR*RPHQHLVATGPEGR
Trigger: CCTACCTTCTGGGCCAGTGGCCACGAGATGCTGATGGGGCCTTCACCTGCTGCACCAATGACAAGGCCACCCAGACGCCCCTGTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000240364.7
ENST00000505159.5
ENST00000513602.5
ENST00000514018.5
ENST00000514841.1
ENST00000515240.5
CDS TCA 90 bp TCGGAACCGTCGGGCCGCAGCCGCCGGCAATGCCGCGAAGGAAGGTaGGAAACGGGAGAGGAGGGATGGCGGGTTTCTAAGGACAGTCGA +
Preference number: 5 (lower is better)
Translates to: SEPSGRSRRQCREGR*ETGEEGWRVSKDSR
Trigger: TCGACTGTCCTTAGAAACCCGCCATCCCTCCTCTCCCGTTTCTCACCTTCCTTCGCGGCATTGCCGGCGGCTGCGGCCCGACGGTTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS TCA 90 bp CAGGGAGAATGTACGCCGGACCTGAAGTGGCTGAGGCCTACACACTaGCTTTTCTGGGGCCACCGAGCATGGGACGCTGGCTGCACGGCC +
Preference number: 5 (lower is better)
Translates to: QGECTPDLKWLRPTH*LFWGHRAWDAGCTA
Trigger: GGCCGTGCAGCCAGCGTCCCATGCTCGGTGGCCCCAGAAAAGTCAGTGTGTAGGCCTCAGCCACTTCAGGTCCGGCGTACATTCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000506156.1
CDS CCA 90 bp CAGGAGGAGGAGGGGATGATCACAGCTGCCACTCTGGGGAGGAGCTaGGGCCCGGTGCCCATCAGGGATATCAAGGATCCTCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: QEEEGMITAATLGRS*GPVPIRDIKDPQQL
Trigger: GAGCTGCTGAGGATCCTTGATATCCCTGATGGGCACCGGGCCCCAGCTCCTCCCCAGAGTGGCAGCTGTGATCATCCCCTCCTCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000240364.7
ENST00000503855.5
ENST00000505159.5
ENST00000511743.5
ENST00000513602.5
ENST00000514018.5
CDS TCA 90 bp ACCACTGCACTCCAGCCTGGGTGGCCTTGTCATTGGTGCAGCAGGTaGAGGCCCCATCAGCATCTCGTGGCCACTGGCCCAGAAGGTAGG +
Preference number: 5 (lower is better)
Translates to: TTALQPGWPCHWCSR*RPHQHLVATGPEGR
Trigger: CCTACCTTCTGGGCCAGTGGCCACGAGATGCTGATGGGGCCTTCACCTGCTGCACCAATGACAAGGCCACCCAGGCTGGAGTGCAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509347.5
CDS-3UTR CAA 90 bp CAGCTACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATGAGGAGGCTTTGTCGTaGGGGGTGGATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QLLVEKAGPITFRGAGAHEEALS*GVDASS
Trigger: GGAGCTGGCATCCACCCCCAACGACAAAGCCTCCTC...ATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGTAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CAA 90 bp GGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTGAGGAGGCTTTGTCGTaGGGGGTGGATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GPITFRGAGAHQKEDPGLEEALS*GVDASS
Trigger: GGAGCTGGCATCCACCCCCAACGACAAAGCCTCCTC...AAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CAA 90 bp GAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTGGGGGGGAGATCCCGGGTTaGAGGGGCAGTTACGGAAGA +
Preference number: 5 (lower is better)
Translates to: EGPATKALVSMVKWGRGGGEIPG*RGSYGR
Trigger: TCTTCCGTAACTGCCCCTCAAACCCGGGATCTCCCC...CCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS TCA 90 bp AGGCCCCATCAGCATCTCGTGGCCACTGGCCCAGAAGGTAGGAGCTaGGGATGGTGTCCAGGGAGAATGTACGCCGGACCTGAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RPHQHLVATGPEGRS*GWCPGRMYAGPEVA
Trigger: AGCCACTTCAGGTCCGGCGTACATTCTCCCTGGACACCATCCTCAGCTCCTACCTTCTGGGCCAGTGGCCACGAGATGCTGATGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000240364.7
ENST00000503720.1
ENST00000505159.5
ENST00000506156.1
ENST00000509347.5
ENST00000513602.5
ENST00000514018.5
ENST00000514841.1
ENST00000515240.5
CDS TCA 90 bp CAGGGAGAATGTACGCCGGACCTGAAGTGGCTGAGGCCTACACACTaGCTTTTCTGGGGCCACCGAGCATGGGACGCTGGCTGGATCGGA +
Preference number: 5 (lower is better)
Translates to: QGECTPDLKWLRPTH*LFWGHRAWDAGWIG
Trigger: TCCGATCCAGCCAGCGTCCCATGCTCGGTGGCCCCAGAAAAGTCAGTGTGTAGGCCTCAGCCACTTCAGGTCCGGCGTACATTCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505159.5
ENST00000509347.5
CDS CCA 90 bp CCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTaGGGCAGGGGTGGGACCCTCAGACCATCAGGGAGCTCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: PGEGPATKALVSMVK*GRGGTLRPSGSSGK
Trigger: TTTTCCAGAGCTCCCTGATGGTCTGAGGGTCCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS CCA 90 bp GAGGCCTACACACTGACTTTTCTGGGGCCACCGAGCATGGGACGCTaGCTGCAAGAGAACACAGCCCGCACGCCTTGCCATCAGCATGGA +
Preference number: 5 (lower is better)
Translates to: EAYTLTFLGPPSMGR*LQENTARTPCHQHG
Trigger: TCCATGCTGATGGCAAGGCGTGCGGGCTGTGTTCTCTTGCAGCCAGCGTCCCATGCTCGGTGGCCCCAGAAAAGTCAGTGTGTAGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514841.1
CDS-3UTR CAA 90 bp GGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCAGGGGTGGGACCCAGGATGCTGAGCGCTaGTGTGCACAGGAACTGGCA +
Preference number: 5 (lower is better)
Translates to: GPATKALVSMVKWGRGGTQDAER*CAQELA
Trigger: TGCCAGTTCCTGTGCACACAAGCGCTCAGCATCCTG...GGTCCCACCCCTGCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CAA 90 bp GCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCAGGATGCTGAGCGCTaGTGTGCACAGGAACTGGCA +
Preference number: 5 (lower is better)
Translates to: AGPITFRGAGAHQKEDPGQDAER*CAQELA
Trigger: TGCCAGTTCCTGTGCACACAAGCGCTCAGCATCCTG...CCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS TCA 90 bp CAGGGAGAATGTACGCCGGACCTGAAGTGGCTGAGGCCTACACACTaGCTTTTCTGGGGCCACCGAGCATGGGACGCTGGCGAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: QGECTPDLKWLRPTH*LFWGHRAWDAGEER
Trigger: CCTTTCTTCGCCAGCGTCCCATGCTCGGTGGCCCCAGAAAAGTCAGTGTGTAGGCCTCAGCCACTTCAGGTCCGGCGTACATTCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503720.1
CDS TCA 90 bp CAGGGAGAATGTACGCCGGACCTGAAGTGGCTGAGGCCTACACACTaGCTTTTCTGGGGCCACCGAGCATGGGACGCTGGCTGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: QGECTPDLKWLRPTH*LFWGHRAWDAGCKR
Trigger: TCTCTTGCAGCCAGCGTCCCATGCTCGGTGGCCCCAGAAAAGTCAGTGTGTAGGCCTCAGCCACTTCAGGTCCGGCGTACATTCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514841.1
CDS GCA 90 bp CCGAGCATGGGACGCTGGCTGCAAGAGAACACAGCCCGCACGCCTTaGCATCAGCATGGAGGAAGGAGACGTGGCAATCACCTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: PSMGRWLQENTARTP*HQHGGRRRGNHLPL
Trigger: AAGAGGAAGGTGATTGCCACGTCTCCTTCCTCCATGCTGATGGCAAGGCGTGCGGGCTGTGTTCTCTTGCAGCCAGCGTCCCATGCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514841.1
CDS CCA 90 bp AGCTCCTCTTCTCCCTGCTCCTTCACAAATACCTCCTCCAGCTCTTaGTTGAGCCCTTCCAGGCTCCTGTGCAGGCAGGGGCTGAGTCGC +
Preference number: 5 (lower is better)
Translates to: SSSSPCSFTNTSSSS*LSPSRLLCRQGLSR
Trigger: GCGACTCAGCCCCTGCCTGCACAGGAGCCTGGAAGGGCTCAACCAAGAGCTGGAGGAGGTATTTGTGAAGGAGCAGGGAGAAGAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000240364.7
ENST00000503573.5
ENST00000503855.5
ENST00000505159.5
ENST00000506156.1
ENST00000511743.5
ENST00000513602.5
ENST00000514018.5
ENST00000515240.5
CDS CCA 90 bp GAACACAGCCCGCACGCCTTGCCATCAGCATGGAGGAAGGAGACGTaGCAATCACCTTCCTCTTCTAAGAGATGTGGCCTGCCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: EHSPHALPSAWRKET*QSPSSSKRCGLPAP
Trigger: CGGGGCAGGCAGGCCACATCTCTTAGAAGAGGAAGGTGATTGCCACGTCTCCTTCCTCCATGCTGATGGCAAGGCGTGCGGGCTGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514841.1
CDS-3UTR CAA 90 bp ACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAGGCGTCTGGGTGGCCTaGTCATTGGTGCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TSGEGRSHHVQRGRCPSKGVWVA*SLVQQV
Trigger: CACCTGCTGCACCAATGACAAGGCCACCCAGACGCC...TTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CAA 90 bp GGCAAGGACTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGAGGAGGCTTTGTCGTaGGGGGTGGATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GKDWRWAAIFKKGWVSWREEALS*GVDASS
Trigger: GGAGCTGGCATCCACCCCCAACGACAAAGCCTCCTC...TCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAGTCCTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR CAA 90 bp AAGAGGGGCTTCATCAGGTTGACGGGGCAGAAGGCTGAGCCAGTCGGGTTGAAACCTGGAGAGGAGGCTTaGTCGTTGGGGGTGGATGCC +
Preference number: 5 (lower is better)
Translates to: KRGFIRLTGQKAEPVGLKPGEEA*SLGVDA
Trigger: GGCATCCACCCCCAACGACAAAGCCTCCTCTCCAGG...TTTCAACCCGACTGGCTCAGCCTTCTGCCCCGTCAACCTGATGAAGCCCCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS TCA 90 bp AAAGGATCGAACTTCCCAGCACCCTCTCTGGCCCGTAACGTCAGGTaGCGCGAGACCCAGCCGGAAGTGAAGGAAAAAGCGCTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: KGSNFPAPSLARNVR*RETQPEVKEKALQP
Trigger: GGGCTGAAGCGCTTTTTCCTTCACTTCCGGCTGGGTCTCGCGTCACCTGACGTTACGGGCCAGAGAGGGTGCTGGGAAGTTCGATCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS-3UTR CAA 90 bp GACACAGTAAGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATCCTGGAGAGGAGGCTTaGTCGTTGGGGGTGGATGCC +
Preference number: 5 (lower is better)
Translates to: DTVSERKCSKAEREGPLHPGEEA*SLGVDA
Trigger: GGCATCCACCCCCAACGACAAAGCCTCCTCTCCAGG...ATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACTTACTGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CAA 90 bp CCTGGGGCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAGGGGAGATCCCGGGTTaGAGGGGCAGTTACGGAAGA +
Preference number: 5 (lower is better)
Translates to: PGAGRAGLLLKTIFSQGEGEIPG*RGSYGR
Trigger: TCTTCCGTAACTGCCCCTCAAACCCGGGATCTCCCC...TTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CAA 90 bp GGCAAGGACTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGAGGGGAGATCCCGGGTTaGAGGGGCAGTTACGGAAGA +
Preference number: 5 (lower is better)
Translates to: GKDWRWAAIFKKGWVSWRGEIPG*RGSYGR
Trigger: TCTTCCGTAACTGCCCCTCAAACCCGGGATCTCCCC...TCTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAGTCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR CAA 90 bp GTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTCCCGTTAGGGCTGCTTaGGTCAGCTCCTCCAATGAG +
Preference number: 5 (lower is better)
Translates to: VPSRSEGPVPIKKRTQGFPVRAA*VSSSNE
Trigger: CTCATTGGAGGAGCTGACCAAAGCAGCCCTAACGGG...AAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS TCA 90 bp GCTTCAACTTGGAAATCTGGGTGGCCTTGTCATTGGTGCAGCAGGTaGAGGCCCCATCAGCATCTCGTGGCCACTGGCCCAGAAGGTAGG +
Preference number: 5 (lower is better)
Translates to: ASTWKSGWPCHWCSR*RPHQHLVATGPEGR
Trigger: CCTACCTTCTGGGCCAGTGGCCACGAGATGCTGATGGGGCCTTCACCTGCTGCACCAATGACAAGGCCACCCAGATTTCCAAGTTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503720.1
ENST00000506156.1
CDS-3UTR CAA 90 bp GCTGAATTGGTCAAGTGTTATGGCCCGTTAGGGCTGCTTTGGTCAGCTCCTCCACCTGGAGAGGAGGCTTaGTCGTTGGGGGTGGATGCC +
Preference number: 5 (lower is better)
Translates to: AELVKCYGPLGLLWSAPPPGEEA*SLGVDA
Trigger: GGCATCCACCCCCAACGACAAAGCCTCCTCTCCAGG...TGGAGGAGCTGACCAAAGCAGCCCTAACGGGCCATAACACTTGACCAATTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CAA 90 bp ATTGGTCAAGTGTTATGGCCCGTTAGGGCTGCTTTGGTCAGCTCCTCCAATGAGGGCGTCTGGGTGGCCTaGTCATTGGTGCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: IGQVLWPVRAALVSSSNEGVWVA*SLVQQV
Trigger: CACCTGCTGCACCAATGACAAGGCCACCCAGACGCC...CTCATTGGAGGAGCTGACCAAAGCAGCCCTAACGGGCCATAACACTTGACCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CAA 90 bp GCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCGTCCTCTGCAGTTGTaGCTTCAACTTGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: AGPITFRGAGAHQKEDPGRPLQL*LQLGNL
Trigger: GAGATTTCCAAGTTGAAGCAACAACTGCAGAGGACG...CCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS CCA 90 bp GCTCCGGGTTCCACCACTGGAGTCACTTTCTGCCCAACTTCAAAATaGCGCCCACTAGCTTCACCAAAAGGATCGAACTTCCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: APGSTTGVTFCPTSK*RPLASPKGSNFPAP
Trigger: GGGTGCTGGGAAGTTCGATCCTTTTGGTGAAGCTAGTGGGCGCCATTTTGAAGTTGGGCAGAAAGTGACTCCAGTGGTGGAACCCGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS-3UTR CAA 90 bp GGACCTGGGGAGGGACCTGCCACCAAGGCACTGGTCTCTATGGTAAAGTGGGGCGGGTTGAAATGGACTTaGTTCTTGTCAGGACAGGAA +
Preference number: 5 (lower is better)
Translates to: GPGEGPATKALVSMVKWGGLKWT*FLSGQE
Trigger: TTCCTGTCCTGACAAGAACAAAGTCCATTTCAACCC...GCCCCACTTTACCATAGAGACCAGTGCCTTGGTGGCAGGTCCCTCCCCAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CAA 90 bp TCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGACACACACTTGGGAAAACACTaGTTTCCTCCCTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SRSEGPVPIKKRTQGFDTHLGKH*FPPSAS
Trigger: GCTGGCAGAGGGAGGAAACAAGTGTTTTCCCAAGTG...TGTGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS CCA 90 bp GAGCATGGGACGCTGGTAAAAATGGTTGGCTCCGGGTTCCACCACTaGAGTCACTTTCTGCCCAACTTCAAAATGGCGCCCACTAGCTTC +
Preference number: 5 (lower is better)
Translates to: EHGTLVKMVGSGFHH*SHFLPNFKMAPTSF
Trigger: GAAGCTAGTGGGCGCCATTTTGAAGTTGGGCAGAAAGTGACTCCAGTGGTGGAACCCGGAGCCAACCATTTTTACCAGCGTCCCATGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS-3UTR CAA 90 bp AGGCAAGGACTGGAGATGGGCTGCCATCTTCAAGAAAGGCTGGGTGTCCTGGAGGCTGAGCCAGTCGGGTaGAAATGGACTTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RQGLEMGCHLQERLGVLEAEPVG*KWTLFL
Trigger: CAAGAACAAAGTCCATTTCAACCCGACTGGCTCAGC...CTCCAGGACACCCAGCCTTTCTTGAAGATGGCAGCCCATCTCCAGTCCTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS-3UTR CAA 90 bp ACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAGCTGAGCCAGTCGGGTaGAAATGGACTTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: TSGEGRSHHVQRGRCPSKAEPVG*KWTLFL
Trigger: CAAGAACAAAGTCCATTTCAACCCGACTGGCTCAGC...TTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS TCA 90 bp GCTGGGGCCCGGTGCCCATCAGGGATATCAAGGATCTGTAGGGCTTaGTCAATGTGTTGTCCCCATAAGACTATAAGCCTCATGAGGGCA +
Preference number: 5 (lower is better)
Translates to: AGARCPSGISRICRA*SMCCPHKTISLMRA
Trigger: TGCCCTCATGAGGCTTATAGTCTTATGGGGACAACACATTGATCAAGCCCTACAGATCCTTGATATCCCTGATGGGCACCGGGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS TCA 90 bp GGAGGCGTTCTTATTAATTGGTCGCTGAAACGTCTGGAAGCATATTaGTTGGCTGGTGACGCCGCCTGTTTGGGCTCAACGGTCACCTCC +
Preference number: 5 (lower is better)
Translates to: GGVLINWSLKRLEAY*LAGDAACLGSTVTS
Trigger: GGAGGTGACCGTTGAGCCCAAACAGGCGGCGTCACCAGCCAATCAATATGCTTCCAGACGTTTCAGCGACCAATTAATAAGAACGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505159.5
ENST00000509347.5
CDS TCA 90 bp CATGGGACGCTGGCTGGATCGGAGGCGTTCTTATTAATTGGTCGCTaGAACGTCTGGAAGCATATTGATTGGCTGGTGACGCCGCCTGTT +
Preference number: 5 (lower is better)
Translates to: HGTLAGSEAFLLIGR*NVWKHIDWLVTPPV
Trigger: AACAGGCGGCGTCACCAGCCAATCAATATGCTTCCAGACGTTTCAGCGACCAATTAATAAGAACGCCTCCGATCCAGCCAGCGTCCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505159.5
ENST00000509347.5
CDS-3UTR CAA 90 bp AGTGAAAGAAAGTGCTCGAAGGCCGAGAGGGAAGGGCCCCTCCATACCCCATCTCTTCGTCCTCTGCAGTaGTTGCTTCAACTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: SERKCSKAEREGPLHTPSLRPLQ*LLQLGN
Trigger: ATTTCCAAGTTGAAGCAACAACTGCAGAGGACGAAG...AGATGGGGTATGGAGGGGCCCTTCCCTCTCGGCCTTCGAGCACTTTCTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CAA 90 bp ACTAGTGGAGAAGGCAGGTCCCATCACGTTCAGAGGGGCCGGTGCCCATCAAAAGGGTTGAAATGGACTTaGTTCTTGTCAGGACAGGAA +
Preference number: 5 (lower is better)
Translates to: TSGEGRSHHVQRGRCPSKGLKWT*FLSGQE
Trigger: TTCCTGTCCTGACAAGAACAAAGTCCATTTCAACCC...TTTTGATGGGCACCGGCCCCTCTGAACGTGATGGGACCTGCCTTCTCCACTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS-3UTR CAA 90 bp GCTGGGCGGGCTGGGCTGCTACTTAAGACAATCTTTAGTCAGGGTGAAAGCGAGCTTCGTCCTCTGCAGTaGTTGCTTCAACTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: AGRAGLLLKTIFSQGESELRPLQ*LLQLGN
Trigger: ATTTCCAAGTTGAAGCAACAACTGCAGAGGACGAAG...CTCGCTTTCACCCTGACTAAAGATTGTCTTAAGTAGCAGCCCAGCCCGCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CAA 90 bp ATTGGTCAAGTGTTATGGCCCGTTAGGGCTGCTTTGGTCAGCTCCTCCAATGAGGCTGAGCCAGTCGGGTaGAAATGGACTTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: IGQVLWPVRAALVSSSNEAEPVG*KWTLFL
Trigger: CAAGAACAAAGTCCATTTCAACCCGACTGGCTCAGC...CTCATTGGAGGAGCTGACCAAAGCAGCCCTAACGGGCCATAACACTTGACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CAA 90 bp CCTCCTATACAGTCATTTGGACTGACACCCAGGGGTGGGGGACTCAAGACCTTCAGTTGTTGCTTCAACTaGGAAATCTCTTTTCGGTGG +
Preference number: 5 (lower is better)
Translates to: PPIQSFGLTPRGGGLKTFSCCFN*EISFRW
Trigger: CCACCGAAAAGAGATTTCCAAGTTGAAGCAACAACT...GAAGGTCTTGAGTCCCCCACCCCTGGGTGTCAGTCCAAATGACTGTATAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CAA 90 bp CATCACGTTCAGAGGGGCCGGTGCCCATCAAAAAGAGGACCCAGGGCTTTGACAGCAAAAATAGTGTCTTaGGGAGAAAATAGAGTCTCT +
Preference number: 5 (lower is better)
Translates to: HHVQRGRCPSKRGPRALTAKIVS*GENRVS
Trigger: AGAGACTCTATTTTCTCCCAAAGACACTATTTTTGC...TGTCAAAGCCCTGGGTCCTCTTTTTGATGGGCACCGGCCCCTCTGAACGTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS-3UTR CAA 90 bp TCGTTCATGGCCAGCTTGCTCTGTGACAAAAATAAGGGCCTCCTATACAGTCATCGTCCTCTGCAGTTGTaGCTTCAACTTGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: SFMASLLCDKNKGLLYSHRPLQL*LQLGNL
Trigger: GAGATTTCCAAGTTGAAGCAACAACTGCAGAGGACG...ATGACTGTATAGGAGGCCCTTATTTTTGTCACAGAGCAAGCTGGCCATGAACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240364.7
CDS GCA 90 bp AAAAACAGCCACATTCAGGCCGCCACGGGTACTACTAATATCTCTTaGAAACTCTTCAAGTACCTCTTTCTTCTGGGATATGCGAGAGGA +
Preference number: 5 (lower is better)
Translates to: KNSHIQAATGTTNIS*KLFKYLFLLGYARG
Trigger: TCCTCTCGCATATCCCAGAAGAAAGAGGTACTTGAAGAGTTTGCAAGAGATATTAGTAGTACCCGTGGCGGCCTGAATGTGGCTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511743.5
CDS TCA 90 bp TCTTCACTCATATCCACCACTGTCCTAAAAGAATTTGAAGCAGCCTaGAACAGCACATATGGTCTGACAAGACCTTTCCTGACCTACTCA +
Preference number: 5 (lower is better)
Translates to: SSLISTTVLKEFEAA*NSTYGLTRPFLTYS
Trigger: TGAGTAGGTCAGGAAAGGTCTTGTCAGACCATATGTGCTGTTTCAGGCTGCTTCAAATTCTTTTAGGACAGTGGTGGATATGAGTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514841.1
CDS GCA 72 bp GGCCGCCACGGAGCCCGCCGGAGCCACCGTTCCTGCTaGTGCCGCCGCTGCCCGAATCGGAACCGTCGGGCC +
Preference number: 6 (lower is better)
Translates to: GRHGARRSHRSC*CRRCPNRNRRA
Trigger: GGCCCGACGGTTCCGATTCGGGCAGCGGCGGCAGCAGCAGGAACGGTGGCTCCGGCGGGCTCCGTGGCGGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS GCA 72 bp GCTGCACGGCCACCCCCGTCCCGGCGCTGGTGCGGCTaGTGCAGCTGGAAGGGGATCGTGGCCCTGAGCGGC +
Preference number: 6 (lower is better)
Translates to: AARPPPSRRWCG*CSWKGIVALSG
Trigger: GCCGCTCAGGGCCACGATCCCCTTCCAGCTGCAGCAGCCGCACCAGCGCCGGGACGGGGGTGGCCGTGCAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000506156.1
CDS GCA 72 bp CGCCACGGAGCCCGCCGGAGCCACCGTTCCTGCTGCTaGCGCCGCTGCCCGAATCGGAACCGTCGGGCCGCA +
Preference number: 6 (lower is better)
Translates to: RHGARRSHRSCC*RRCPNRNRRAA
Trigger: TGCGGCCCGACGGTTCCGATTCGGGCAGCGGCGGCAGCAGCAGGAACGGTGGCTCCGGCGGGCTCCGTGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS CCA 72 bp GGGACGCTGGCTGCACGGCCACCCCCGTCCCGGCGCTaGTGCGGCTGCTGCAGCTGGAAGGGGATCGTGGCC +
Preference number: 6 (lower is better)
Translates to: GTLAARPPPSRR*CGCCSWKGIVA
Trigger: GGCCACGATCCCCTTCCAGCTGCAGCAGCCGCACCAGCGCCGGGACGGGGGTGGCCGTGCAGCCAGCGTCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000506156.1
CDS GCA 72 bp ACGCTGGCTGCACGGCCACCCCCGTCCCGGCGCTGGTaGGGCTGCTGCAGCTGGAAGGGGATCGTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: TLAARPPPSRRW*GCCSWKGIVAL
Trigger: CAGGGCCACGATCCCCTTCCAGCTGCAGCAGCCGCACCAGCGCCGGGACGGGGGTGGCCGTGCAGCCAGCGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000506156.1
CDS CCA 72 bp CCTTGGAGGCTTCCGGATCCTTCCGAGGTGGTGGCCTaGGGCTGGCCGGGGGAAGGGGAGATCCCGGGTTTG +
Preference number: 6 (lower is better)
Translates to: PWRLPDPSEVVA*GWPGEGEIPGL
Trigger: CAAACCCGGGATCTCCCCTTCCCCCGGCCAGCCCCAGGCCACCACCTCGGAAGGATCCGGAAGCCTCCAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS TCA 72 bp TCAGCCCGCGGCGCCTGCGCAGAACGCTCCAGACGCTaGGAGGCAGGAGGCACTAGGGATCGTCCGCAGGAT +
Preference number: 6 (lower is better)
Translates to: SARGACAERSRR*EAGGTRDRPQD
Trigger: ATCCTGCGGACGATCCCTAGTGCCTCCTGCCTCTCAGCGTCTGGAGCGTTCTGCGCAGGCGCCGCGGGCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS TCA 72 bp CCCGTAACGTCAGGTGACGCGAGACCCAGCCGGAAGTaGAGGAAAAAGCGCTTCAGCCCGCGGCGCCTGCGC +
Preference number: 6 (lower is better)
Translates to: PVTSGDARPSRK*RKKRFSPRRLR
Trigger: GCGCAGGCGCCGCGGGCTGAAGCGCTTTTTCCTTCACTTCCGGCTGGGTCTCGCGTCACCTGACGTTACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS CCA 72 bp TGCGCTGCCATGGCTCGAATGGCAGTGGGGAGGCCTTaGAGGCTTCCGGATCCTTCCGAGGTGGTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: CAAMARMAVGRP*RLPDPSEVVAW
Trigger: CCAGGCCACCACCTCGGAAGGATCCGGAAGCCTCCAAGGCCTCCCCACTGCCATTCGAGCCATGGCAGCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS TCA 72 bp GGGGCGTCTGGGTGGCCTTGTCATTGGTGCAGCAGGTaGAGGCCCCATCAGCATCTCGTGGCCACTGGCCCA +
Preference number: 6 (lower is better)
Translates to: GASGWPCHWCSR*RPHQHLVATGP
Trigger: TGGGCCAGTGGCCACGAGATGCTGATGGGGCCTTCACCTGCTGCACCAATGACAAGGCCACCCAGACGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000240364.7
ENST00000505159.5
ENST00000513602.5
ENST00000514018.5
ENST00000514841.1
ENST00000515240.5
CDS TCA 72 bp TCGGGCCGCAGCCGCCGGCAATGCCGCGAAGGAAGGTaGGAAACGGGAGAGGAGGGATGGCGGGTTTCTAAG +
Preference number: 6 (lower is better)
Translates to: SGRSRRQCREGR*ETGEEGWRVSK
Trigger: CTTAGAAACCCGCCATCCCTCCTCTCCCGTTTCTCACCTTCCTTCGCGGCATTGCCGGCGGCTGCGGCCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS CCA 72 bp TGGAAGCATATTGATTGGCTGGTGACGCCGCCTGTTTaGGCTCAACGGTCACCTCCCCGCGTGCGGGGGCGG +
Preference number: 6 (lower is better)
Translates to: WKHIDWLVTPPV*AQRSPPRVRGR
Trigger: CCGCCCCCGCACGCGGGGAGGTGACCGTTGAGCCCAAACAGGCGGCGTCACCAGCCAATCAATATGCTTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505159.5
CDS TCA 72 bp CTCCAGCCTGGGTGGCCTTGTCATTGGTGCAGCAGGTaGAGGCCCCATCAGCATCTCGTGGCCACTGGCCCA +
Preference number: 6 (lower is better)
Translates to: LQPGWPCHWCSR*RPHQHLVATGP
Trigger: TGGGCCAGTGGCCACGAGATGCTGATGGGGCCTTCACCTGCTGCACCAATGACAAGGCCACCCAGGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509347.5
CDS TCA 72 bp TGTACGCCGGACCTGAAGTGGCTGAGGCCTACACACTaGCTTTTCTGGGGCCACCGAGCATGGGACGCTGGC +
Preference number: 6 (lower is better)
Translates to: CTPDLKWLRPTH*LFWGHRAWDAG
Trigger: GCCAGCGTCCCATGCTCGGTGGCCCCAGAAAAGTCAGTGTGTAGGCCTCAGCCACTTCAGGTCCGGCGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000240364.7
ENST00000503720.1
ENST00000505159.5
ENST00000506156.1
ENST00000509347.5
ENST00000514841.1
ENST00000515240.5
CDS TCA 72 bp TGTACGCCGGACCTGAAGTGGCTGAGGCCTACACACTaGCTTTTCTGGGGCCACCGAGCATGGGACGCTGGG +
Preference number: 6 (lower is better)
Translates to: CTPDLKWLRPTH*LFWGHRAWDAG
Trigger: CCCAGCGTCCCATGCTCGGTGGCCCCAGAAAAGTCAGTGTGTAGGCCTCAGCCACTTCAGGTCCGGCGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513602.5
CDS CAA 90 bp GGATGGCGGGTTTCTAAGGACAGTCGATTGAGCACCGTGACGCAGTaGGCCACGCCTCACAGTGCTTGGGTCCCAACTTTCCGCTCCCCC +
Preference number: 6 (lower is better)
Translates to: GWRVSKDSRLSTVTQ*ATPHSAWVPTFRSP
Trigger: GGGGGAGCGGAAAGTTGGGACCCAAGCACTGTGAGGCGTGGCCAACTGCGTCACGGTGCTCAATCGACTGTCCTTAGAAACCCGCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS TCA 72 bp CAGCATCTCGTGGCCACTGGCCCAGAAGGTAGGAGCTaGGGATGGTGTCCAGGGAGAATGTACGCCGGACCT +
Preference number: 6 (lower is better)
Translates to: QHLVATGPEGRS*GWCPGRMYAGP
Trigger: AGGTCCGGCGTACATTCTCCCTGGACACCATCCTCAGCTCCTACCTTCTGGGCCAGTGGCCACGAGATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240364.7
ENST00000503720.1
ENST00000505159.5
ENST00000506156.1
ENST00000509347.5
ENST00000513602.5
ENST00000514018.5
ENST00000514841.1
ENST00000515240.5
CDS TCA 72 bp TGTACGCCGGACCTGAAGTGGCTGAGGCCTACACACTaGCTTTTCTGGGGCCACCGAGCATGGGACGCTGGT +
Preference number: 6 (lower is better)
Translates to: CTPDLKWLRPTH*LFWGHRAWDAG
Trigger: ACCAGCGTCCCATGCTCGGTGGCCCCAGAAAAGTCAGTGTGTAGGCCTCAGCCACTTCAGGTCCGGCGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS GCA 72 bp GGACGCTGGCTGCAAGAGAACACAGCCCGCACGCCTTaGCATCAGCATGGAGGAAGGAGACGTGGCAATCAC +
Preference number: 6 (lower is better)
Translates to: GRWLQENTARTP*HQHGGRRRGNH
Trigger: GTGATTGCCACGTCTCCTTCCTCCATGCTGATGGCAAGGCGTGCGGGCTGTGTTCTCTTGCAGCCAGCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514841.1
CDS GCA 72 bp ATTGAGCACCGTGACGCAGTTGGCCACGCCTCACAGTaGTTGGGTCCCAACTTTCCGCTCCCCCGAACCTTG +
Preference number: 6 (lower is better)
Translates to: IEHRDAVGHASQ*LGPNFPLPRTL
Trigger: CAAGGTTCGGGGGAGCGGAAAGTTGGGACCCAAGCACTGTGAGGCGTGGCCAACTGCGTCACGGTGCTCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS CCA 72 bp TGCCCCAGGATGCTGAGCGCTTGTGTGCACAGGAACTaGCACGCTCACCTTCTAGCTCTTGCCAGGACAGGG +
Preference number: 6 (lower is better)
Translates to: CPRMLSACVHRN*HAHLLALARTG
Trigger: CCCTGTCCTGGCAAGAGCTAGAAGGTGAGCGTGCCAGTTCCTGTGCACACAAGCGCTCAGCATCCTGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000240364.7
ENST00000503855.5
ENST00000505159.5
ENST00000509347.5
ENST00000511743.5
ENST00000513602.5
ENST00000514018.5
ENST00000514841.1
ENST00000515240.5
CDS CCA 72 bp ACACTGACTTTTCTGGGGCCACCGAGCATGGGACGCTaGCTGCAAGAGAACACAGCCCGCACGCCTTGCCAT +
Preference number: 6 (lower is better)
Translates to: TLTFLGPPSMGR*LQENTARTPCH
Trigger: ATGGCAAGGCGTGCGGGCTGTGTTCTCTTGCAGCCAGCGTCCCATGCTCGGTGGCCCCAGAAAAGTCAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514841.1
CDS CCA 72 bp AGCACCGTGACGCAGTTGGCCACGCCTCACAGTGCTTaGGTCCCAACTTTCCGCTCCCCCGAACCTTGTTCA +
Preference number: 6 (lower is better)
Translates to: STVTQLATPHSA*VPTFRSPEPCS
Trigger: TGAACAAGGTTCGGGGGAGCGGAAAGTTGGGACCCAAGCACTGTGAGGCGTGGCCAACTGCGTCACGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS CCA 72 bp CTTCACCAAAAGGATCGAACTTCCCAGCACCCTCTCTaGCCCGTAACGTCAGGTGACGCGAGACCCAGCCGG +
Preference number: 6 (lower is better)
Translates to: LHQKDRTSQHPL*PVTSGDARPSR
Trigger: CCGGCTGGGTCTCGCGTCACCTGACGTTACGGGCCAGAGAGGGTGCTGGGAAGTTCGATCCTTTTGGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS CAA 72 bp GGGACGCTGGCTGCAAGAGAACACAGCCCGCACGCCTaGCCATCAGCATGGAGGAAGGAGACGTGGCAATCA +
Preference number: 6 (lower is better)
Translates to: GTLAAREHSPHA*PSAWRKETWQS
Trigger: TGATTGCCACGTCTCCTTCCTCCATGCTGATGGCAAGGCGTGCGGGCTGTGTTCTCTTGCAGCCAGCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514841.1
CDS CAA 90 bp CAGCTCCTCTTCTCCCTGCTCCTTCACAAATACCTCCTCCAGCTCTaGGTTGAGCCCTTCCAGGCTCCTGTGCAGGCAGGGGCTGAGTCG +
Preference number: 6 (lower is better)
Translates to: QLLFSLLLHKYLLQL*VEPFQAPVQAGAES
Trigger: CGACTCAGCCCCTGCCTGCACAGGAGCCTGGAAGGGCTCAACCAAGAGCTGGAGGAGGTATTTGTGAAGGAGCAGGGAGAAGAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000240364.7
ENST00000503573.5
ENST00000503855.5
ENST00000505159.5
ENST00000506156.1
ENST00000511743.5
ENST00000513602.5
ENST00000514018.5
ENST00000515240.5
CDS CAA 90 bp ACCGAGCATGGGACGCTGGCTGCAAGAGAACACAGCCCGCACGCCTaGCCATCAGCATGGAGGAAGGAGACGTGGCAATCACCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: TEHGTLAAREHSPHA*PSAWRKETWQSPSS
Trigger: AGAGGAAGGTGATTGCCACGTCTCCTTCCTCCATGCTGATGGCAAGGCGTGCGGGCTGTGTTCTCTTGCAGCCAGCGTCCCATGCTCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514841.1
CDS TCA 72 bp GACCATCAGGGAGCTCTGGAAAAGCACAGGCTCTTCTaGTGGTGGGGTGCGCTGCCATGGCTCGAATGGCAG +
Preference number: 6 (lower is better)
Translates to: DHQGALEKHRLF*WWGALPWLEWQ
Trigger: CTGCCATTCGAGCCATGGCAGCGCACCCCACCATCAGAAGAGCCTGTGCTTTTCCAGAGCTCCCTGATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240364.7
ENST00000513602.5
CDS TCA 72 bp TGGAAATCTGGGTGGCCTTGTCATTGGTGCAGCAGGTaGAGGCCCCATCAGCATCTCGTGGCCACTGGCCCA +
Preference number: 6 (lower is better)
Translates to: WKSGWPCHWCSR*RPHQHLVATGP
Trigger: TGGGCCAGTGGCCACGAGATGCTGATGGGGCCTTCACCTGCTGCACCAATGACAAGGCCACCCAGATTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503720.1
ENST00000506156.1
CDS TCA 72 bp AACTTCCCAGCACCCTCTCTGGCCCGTAACGTCAGGTaGCGCGAGACCCAGCCGGAAGTGAAGGAAAAAGCG +
Preference number: 6 (lower is better)
Translates to: NFPAPSLARNVR*RETQPEVKEKA
Trigger: CGCTTTTTCCTTCACTTCCGGCTGGGTCTCGCGTCACCTGACGTTACGGGCCAGAGAGGGTGCTGGGAAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS GCA 72 bp TGTGCACAGGAACTGGCACGCTCACCTTCTAGCTCTTaGCAGGACAGGGGCGTCTGGGTGGCCTTGTCATTG +
Preference number: 6 (lower is better)
Translates to: CAQELARSPSSS*QDRGVWVALSL
Trigger: CAATGACAAGGCCACCCAGACGCCCCTGTCCTGGCAAGAGCTAGAAGGTGAGCGTGCCAGTTCCTGTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000240364.7
ENST00000505159.5
ENST00000513602.5
ENST00000514018.5
ENST00000514841.1
ENST00000515240.5
CDS CAA 72 bp GGAGAGGAGGGATGGCGGGTTTCTAAGGACAGTCGATaGAGCACCGTGACGCAGTTGGCCACGCCTCACAGT +
Preference number: 6 (lower is better)
Translates to: GEEGWRVSKDSR*STVTQLATPHS
Trigger: ACTGTGAGGCGTGGCCAACTGCGTCACGGTGCTCAATCGACTGTCCTTAGAAACCCGCCATCCCTCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS TCA 72 bp GTCGCTGAAACGTCTGGAAGCATATTGATTGGCTGGTaGCGCCGCCTGTTTGGGCTCAACGGTCACCTCCCC +
Preference number: 6 (lower is better)
Translates to: VAETSGSILIGW*RRLFGLNGHLP
Trigger: GGGGAGGTGACCGTTGAGCCCAAACAGGCGGCGTCACCAGCCAATCAATATGCTTCCAGACGTTTCAGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505159.5
ENST00000509347.5
CDS GCA 72 bp TGTGCACAGGAACTGGCACGCTCACCTTCTAGCTCTTaGCAGGACAGGGGCGTCTGTAATCCCAGCCACTTG +
Preference number: 6 (lower is better)
Translates to: CAQELARSPSSS*QDRGVCNPSHL
Trigger: CAAGTGGCTGGGATTACAGACGCCCCTGTCCTGGCAAGAGCTAGAAGGTGAGCGTGCCAGTTCCTGTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509347.5
CDS CAA 72 bp TTCTCCCTGCTCCTTCACAAATACCTCCTCCAGCTCTaGGTTGAGCCCTTCCAGGCTCCTGTGCAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: FSLLLHKYLLQL*VEPFQAPVQAG
Trigger: CCCTGCCTGCACAGGAGCCTGGAAGGGCTCAACCAAGAGCTGGAGGAGGTATTTGTGAAGGAGCAGGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240364.7
ENST00000503573.5
ENST00000503855.5
ENST00000505159.5
ENST00000506156.1
ENST00000511743.5
ENST00000513602.5
ENST00000514018.5
ENST00000515240.5
CDS CCA 72 bp CCGCACGCCTTGCCATCAGCATGGAGGAAGGAGACGTaGCAATCACCTTCCTCTTCTAAGAGATGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: PHALPSAWRKET*QSPSSSKRCGL
Trigger: CAGGCCACATCTCTTAGAAGAGGAAGGTGATTGCCACGTCTCCTTCCTCCATGCTGATGGCAAGGCGTGCGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514841.1
CDS CCA 72 bp CCACCGAGCATGGGACGCTGGGTAACTAAAAATGGTTaGCTCCGGGTTCCACCACTGGAGTCACTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: PPSMGRWVTKNG*LRVPPLESLSA
Trigger: GGCAGAAAGTGACTCCAGTGGTGGAACCCGGAGCCAACCATTTTTAGTTACCCAGCGTCCCATGCTCGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513602.5
CDS GCA 72 bp CGTGGCAATCACCTTCCTCTTCTAAGAGATGTGGCCTaGCTGCCCCGTCTTCACTCATATCCACCACTGTCC +
Preference number: 6 (lower is better)
Translates to: RGNHLPLLRDVA*LPRLHSYPPLS
Trigger: GGACAGTGGTGGATATGAGTGAAGACGGGGCAGGCAGGCCACATCTCTTAGAAGAGGAAGGTGATTGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514841.1
CDS GCA 72 bp TGGTTGGCTCCGGGTTCCACCACTGGAGTCACTTTCTaGCCAACTTCAAAATGGCGCCCACTAGCTTCACCA +
Preference number: 6 (lower is better)
Translates to: WLAPGSTTGVTF*PTSKWRPLASP
Trigger: TGGTGAAGCTAGTGGGCGCCATTTTGAAGTTGGGCAGAAAGTGACTCCAGTGGTGGAACCCGGAGCCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513602.5
ENST00000514018.5
CDS CCA 72 bp CTCTTGCCAGGACAGGGGCGTGTAACTAAAAATGGTTaGCTCCGGGTTCCACCACTGGAGTCACTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: LLPGQGRVTKNG*LRVPPLESLSA
Trigger: GGCAGAAAGTGACTCCAGTGGTGGAACCCGGAGCCAACCATTTTTAGTTACACGCCCCTGTCCTGGCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503855.5
CDS CAA 72 bp GTTTCTAAGGACAGTCGATTGAGCACCGTGACGCAGTaGGCCACGCCTCACAGTGCTTGGGTCCCAACTTTC +
Preference number: 6 (lower is better)
Translates to: VSKDSRLSTVTQ*ATPHSAWVPTF
Trigger: GAAAGTTGGGACCCAAGCACTGTGAGGCGTGGCCAACTGCGTCACGGTGCTCAATCGACTGTCCTTAGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS CCA 72 bp AGCCTGGGCAGCAGAGCAAGAGTAACTAAAAATGGTTaGCTCCGGGTTCCACCACTGGAGTCACTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: SLGSRARVTKNG*LRVPPLESLSA
Trigger: GGCAGAAAGTGACTCCAGTGGTGGAACCCGGAGCCAACCATTTTTAGTTACTCTTGCTCTGCTGCCCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503720.1
CDS CCA 72 bp ACGCTGGTAAAAATGGTTGGCTCCGGGTTCCACCACTaGAGTCACTTTCTGCCCAACTTCAAAATGGCGCCC +
Preference number: 6 (lower is better)
Translates to: TLVKMVGSGFHH*SHFLPNFKMAP
Trigger: GGGCGCCATTTTGAAGTTGGGCAGAAAGTGACTCCAGTGGTGGAACCCGGAGCCAACCATTTTTACCAGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS TCA 72 bp CTTATTAATTGGTCGCTGAAACGTCTGGAAGCATATTaGTTGGCTGGTGACGCCGCCTGTTTGGGCTCAACG +
Preference number: 6 (lower is better)
Translates to: LINWSLKRLEAY*LAGDAACLGST
Trigger: CGTTGAGCCCAAACAGGCGGCGTCACCAGCCAATCAATATGCTTCCAGACGTTTCAGCGACCAATTAATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505159.5
ENST00000509347.5
CDS TCA 72 bp CTGGCTGGATCGGAGGCGTTCTTATTAATTGGTCGCTaGAACGTCTGGAAGCATATTGATTGGCTGGTGACG +
Preference number: 6 (lower is better)
Translates to: LAGSEAFLLIGR*NVWKHIDWLVT
Trigger: CGTCACCAGCCAATCAATATGCTTCCAGACGTTTCAGCGACCAATTAATAAGAACGCCTCCGATCCAGCCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505159.5
ENST00000509347.5
CDS CCA 72 bp TCCACCACTGGAGTCACTTTCTGCCCAACTTCAAAATaGCGCCCACTAGCTTCACCAAAAGGATCGAACTTC +
Preference number: 6 (lower is better)
Translates to: STTGVTFCPTSK*RPLASPKGSNF
Trigger: GAAGTTCGATCCTTTTGGTGAAGCTAGTGGGCGCCATTTTGAAGTTGGGCAGAAAGTGACTCCAGTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514018.5
CDS TCA 72 bp CGGTGCCCATCAGGGATATCAAGGATCTGTAGGGCTTaGTCAATGTGTTGTCCCCATAAGACTATAAGCCTC +
Preference number: 6 (lower is better)
Translates to: RCPSGISRICRA*SMCCPHKTISL
Trigger: GAGGCTTATAGTCTTATGGGGACAACACATTGATCAAGCCCTACAGATCCTTGATATCCCTGATGGGCACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503573.5
CDS CAA 72 bp CACCGAGCATGGGACGCTGGCGAAGAAAGGTTTTCTTaGCAAAGAGTGTACTCTTGCAGTTTTGAAGGATTT +
Preference number: 6 (lower is better)
Translates to: HRAWDAGEERFS*QRVYSCSFEGF
Trigger: AAATCCTTCAAAACTGCAAGAGTACACTCTTTGCAAAGAAAACCTTTCTTCGCCAGCGTCCCATGCTCGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503720.1
CDS GCA 72 bp GGCGAAGAAAGGTTTTCTTTGCAAAGAGTGTACTCTTaGAGTTTTGAAGGATTTACTTCAAGATCTGACATT +
Preference number: 6 (lower is better)
Translates to: GEERFSLQRVYS*SFEGFTSRSDI
Trigger: AATGTCAGATCTTGAAGTAAATCCTTCAAAACTGCAAGAGTACACTCTTTGCAAAGAAAACCTTTCTTCGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503720.1