RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EZR (Homo sapiens)

Ensembl gene IDs: ENSG00000092820

Ensembl transcript IDs: ENST00000337147.11, ENST00000367075.4, ENST00000392177.8, ENST00000476189.1

Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCACGAGAAGGAATGAGTGGGCGGAACCAACGGCCTCCACAAGCTaGCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAA +
Preference number: 1 (lower is better)
Translates to: CTRRNEWAEPTASTS*LPAACQGHGRERLQ
Trigger: TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGAGGCCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR TCA 90 bp CATGGCATCTTAGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATaGGTGGGCGGAACCAACGGCCTCCACAAGCTGCCTTCCAGCAGC +
Preference number: 1 (lower is better)
Translates to: HGILAVKEKAVHEKE*VGGTNGLHKLPSSS
Trigger: GCTGCTGGAAGGCAGCTTGTGGAGGCCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCTAAGATGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR GCA 90 bp CATTACATGCATAAAACACTAATAATAATCCTGTTTACACGTGACTaGAGCAGGCAGGTCCAGCTCCACCACTGCCCTCCTGCCACATCA +
Preference number: 1 (lower is better)
Translates to: HYMHKTLIIILFTRD*SRQVQLHHCPPATS
Trigger: TGATGTGGCAGGAGGGCAGTGGTGGAGCTGGACCTGCCTGCTGCAGTCACGTGTAAACAGGATTATTATTAGTGTTTTATGCATGTAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR GCA 90 bp GCCTTTGCAAAGCTTTTATTTCATGTCTGCGGCATGGAATCCACCTaGACATGGCATCTTAGCTGTGAAGGAGAAAGCAGTGCACGAGAA +
Preference number: 1 (lower is better)
Translates to: AFAKLLFHVCGMEST*TWHLSCEGESSARE
Trigger: TTCTCGTGCACTGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATAAAAGCTTTGCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR CCA 90 bp GCAAAGCTTTTATTTCATGTCTGCGGCATGGAATCCACCTGCACATaGCATCTTAGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATG +
Preference number: 1 (lower is better)
Translates to: AKLLFHVCGMESTCT*HLSCEGESSAREGM
Trigger: CATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATAAAAGCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR TCA 90 bp AAACAAACAAACACAAGCAAACAGAGTCTCTTCACAGCTGGAGTCTaGAAGCTCATAGTGGCATGTGTGAATCTGACAAAATTAAAAGTG +
Preference number: 1 (lower is better)
Translates to: KQTNTSKQSLFTAGV*KLIVACVNLTKLKV
Trigger: CACTTTTAATTTTGTCAGATTCACACATGCCACTATGAGCTTTCAGACTCCAGCTGTGAAGAGACTCTGTTTGCTTGTGTTTGTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR TCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAATGGCAGCGCCCGCTATaGGCACCCCTCTGCCCTTGG +
Preference number: 2 (lower is better)
Translates to: STSCLPAACQGHGRERLQWQRPL*APLCPW
Trigger: CCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCA...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR CCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGCTAAAGACACAAGCGTaGCGGGGCTGGCAGCGCCCG +
Preference number: 2 (lower is better)
Translates to: SCEGESSAREGMSGRNQRLKTQA*RGWQRP
Trigger: CGGGCGCTGCCAGCCCCGCCACGCTTGTGTCTTTAG...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR CCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAACCAGGGCGCCTCCCTaGTTCCCAGCCCAGAATGTT +
Preference number: 2 (lower is better)
Translates to: STSCLPAACQGHGRERLQTRAPP*FPAQNV
Trigger: AACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGT...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR CCA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCACTAAAGACACAAGCGTaGCGGGGCTGGCAGCGCCCG +
Preference number: 2 (lower is better)
Translates to: SAAWNPPAHGILAVKEKALKTQA*RGWQRP
Trigger: CGGGCGCTGCCAGCCCCGCCACGCTTGTGTCTTTAG...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR TCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGGCAGCGCCCGCTATaGGCACCCCTCTGCCCTTGG +
Preference number: 2 (lower is better)
Translates to: HCPPATSHQVPWFRGFFIWQRPL*APLCPW
Trigger: CCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCA...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR TCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTGGCAGCGCCCGCTATaGGCACCCCTCTGCCCTTGG +
Preference number: 2 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSWQRPL*APLCPW
Trigger: CCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCA...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR GCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGCTGTTTACACGTGACTaGAGCAGGCAGGTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: SCEGESSAREGMSGRNQRLFTRD*SRQVQL
Trigger: GAGCTGGACCTGCCTGCTGCAGTCACGTGTAAACAG...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR GCA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCATGCCTTCCAGCAGCCTaGCAAGGCCATGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: SAAWNPPAHGILAVKEKACLPAA*QGHGRE
Trigger: CTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCA...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR CCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCACCAGGGCGCCTCCCTaGTTCCCAGCCCAGAATGTT +
Preference number: 2 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSTRAPP*FPAQNV
Trigger: AACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGT...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR CCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGAGAATCAGGCCTGCTTaGCACTATTACAACTGGGGA +
Preference number: 2 (lower is better)
Translates to: SCEGESSAREGMSGRNQRRIRPA*HYYNWG
Trigger: TCCCCAGTTGTAATAGTGCCAAGCAGGCCTGATTCT...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR CCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGACGAGAAGGAATGAGTaGGCGGAACCAACGGCCTCC +
Preference number: 2 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKTRRNE*AEPTAS
Trigger: GGAGGCCGTTGGTTCCGCCCACTCATTCCTTCTCGT...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR CCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGAGCCTGCCAAGGCCATaGCAGAGAGAGACTGCAAAC +
Preference number: 2 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKSLPRP*QRETAN
Trigger: GTTTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCT...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR TCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGAATCCTGTTTACACGTaGCTGCAGCAGGCAGGTCCA +
Preference number: 2 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKNPVYT*LQQAGP
Trigger: TGGACCTGCCTGCTGCAGTCACGTGTAAACAGGATT...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR GCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGCACAGATGGAAGTCCTaGCACGTTTCCTTTAATGAT +
Preference number: 2 (lower is better)
Translates to: SCEGESSAREGMSGRNQRHRWKS*HVSFND
Trigger: ATCATTAAAGGAAACGTGGCAGGACTTCCATCTGTG...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR GCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATACGCGAGAATCAGGCCTaGTTGGCACTATTACAACTG +
Preference number: 2 (lower is better)
Translates to: HCPPATSHQVPWFRGFFIRENQA*LALLQL
Trigger: CAGTTGTAATAGTGCCAAGCAGGCCTGATTCTCGCG...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR CCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATACAAGTATGGCACAGATaGAAGTCCTGCCACGTTTCC +
Preference number: 2 (lower is better)
Translates to: HCPPATSHQVPWFRGFFIQVWHR*KSCHVS
Trigger: GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTG...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR CCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGTCACATCAAGTGCCATaGTTTAGAGGGTTTTTCATA +
Preference number: 2 (lower is better)
Translates to: SCEGESSAREGMSGRNQRSHQVP*FRGFFI
Trigger: TATGAAAAACCCTCTAAACCATGGCACTTGATGTGA...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR CCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGTCACATCAAGTGCCATaGTTTAGAGGGTTTTTCATA +
Preference number: 2 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKSHQVP*FRGFFI
Trigger: TATGAAAAACCCTCTAAACCATGGCACTTGATGTGA...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR GCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATCACAGATGGAAGTCCTaGCACGTTTCCTTTAATGAT +
Preference number: 2 (lower is better)
Translates to: PPATSHQVPWFRGFFICNHRWKS*HVSFND
Trigger: ATCATTAAAGGAAACGTGGCAGGACTTCCATCTGTG...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR GCA 72 bp AGGAATGAGTGGGCGGAACCAACGGCCTCCACAAGCTaGCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAG +
Preference number: 3 (lower is better)
Translates to: RNEWAEPTASTS*LPAACQGHGRE
Trigger: CTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGAGGCCGTTGGTTCCGCCCACTCATTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR TCA 72 bp TTAGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATaGGTGGGCGGAACCAACGGCCTCCACAAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: LAVKEKAVHEKE*VGGTNGLHKLP
Trigger: AGGCAGCTTGTGGAGGCCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR CCA 72 bp TTATTTCATGTCTGCGGCATGGAATCCACCTGCACATaGCATCTTAGCTGTGAAGGAGAAAGCAGTGCACGA +
Preference number: 3 (lower is better)
Translates to: LFHVCGMESTCT*HLSCEGESSAR
Trigger: TCGTGCACTGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR-3UTR CAA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATGAGAATCAGGCCTGCTaGGCACTATTACAACTGGGG +
Preference number: 3 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNENQAC*ALLQLG
Trigger: CCCCAGTTGTAATAGTGCCAAGCAGGCCTGATTCTC...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR CCA 72 bp GTGCCTTTGCAAAGCTTTTATTTCATGTCTGCGGCATaGAATCCACCTGCACATGGCATCTTAGCTGTGAAG +
Preference number: 3 (lower is better)
Translates to: VPLQSFYFMSAA*NPPAHGILAVK
Trigger: CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATAAAAGCTTTGCAAAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337147.11
ENST00000392177.8
3UTR GCA 72 bp AGCTCCACCACTGCCCTCCTGCCACATCACATCAAGTaGCATGGTTTAGAGGGTTTTTCATATGTAATTCTT +
Preference number: 3 (lower is better)
Translates to: SSTTALLPHHIK*HGLEGFSYVIL
Trigger: AAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTGGTGGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR GCA 72 bp AAGCTTTTATTTCATGTCTGCGGCATGGAATCCACCTaGACATGGCATCTTAGCTGTGAAGGAGAAAGCAGT +
Preference number: 3 (lower is better)
Translates to: KLLFHVCGMEST*TWHLSCEGESS
Trigger: ACTGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATAAAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR TCA 72 bp AACACAAGCAAACAGAGTCTCTTCACAGCTGGAGTCTaGAAGCTCATAGTGGCATGTGTGAATCTGACAAAA +
Preference number: 3 (lower is better)
Translates to: NTSKQSLFTAGV*KLIVACVNLTK
Trigger: TTTTGTCAGATTCACACATGCCACTATGAGCTTTCAGACTCCAGCTGTGAAGAGACTCTGTTTGCTTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
3UTR CCA 72 bp CACCACTGCCCTCCTGCCACATCACATCAAGTGCCATaGTTTAGAGGGTTTTTCATATGTAATTCTTTTATT +
Preference number: 3 (lower is better)
Translates to: HHCPPATSHQVP*FRGFFICNSFI
Trigger: AATAAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACAAGCGTGGCGGGGCTGGCAGCGCCCGCTATGAGCACCCCTCTGCCCTTGGTACCAGGGCGCCTCCCTaGTTCCCAGCCCAGAATGTT +
Preference number: 4 (lower is better)
Translates to: HKRGGAGSARYEHPSALGTRAPP*FPAQNV
Trigger: AACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGT...ACCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCAGCCCCGCCACGCTTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp CACAAGCGTGGCGGGGCTGGCAGCGCCCGCTATGAGCACCCCTCTGCCCTTGGTTCAGCCGCTCAGAGCTaGGGTACCCAGACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: HKRGGAGSARYEHPSALGSAAQS*GTQTCA
Trigger: TGCACAAGTCTGGGTACCTCAGCTCTGAGCGGCTGA...ACCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCAGCCCCGCCACGCTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACAAGCGTGGCGGGGCTGGCAGCGCCCGCTATGAGCACCCCTCTGCCCTTGGTTTCATGTCTGCGGCATaGAATCCACCTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: HKRGGAGSARYEHPSALGFMSAA*NPPAHG
Trigger: GCCATGTGCAGGTGGATTCCATGCCGCAGACATGAA...ACCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCAGCCCCGCCACGCTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CACAAGCGTGGCGGGGCTGGCAGCGCCCGCTATGAGCACCCCTCTGCCCTTGGTTTCTCGCGCATCATCTaGTCTTTCTCTCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: HKRGGAGSARYEHPSALGFSRII*SFSLST
Trigger: CGTGGAGAGAGAGAAAGAGCAGATGATGCGCGAGAA...ACCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCAGCCCCGCCACGCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACAAGCGTGGCGGGGCTGGCAGCGCCCGCTATGAGCACCCCTCTGCCCTTGGTCCAGGAGGGCAATCTTaGCAGTGTATTCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: HKRGGAGSARYEHPSALGPGGQS*QCILQA
Trigger: AGCTTGCAGAATACACTGCCAAGATTGCCCTCCTGG...ACCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCAGCCCCGCCACGCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACAAGCGTGGCGGGGCTGGCAGCGCCCGCTATGAGCACCCCTCTGCCCTTGGTCAAGTATGGCACAGATaGAAGTCCTGCCACGTTTCC +
Preference number: 4 (lower is better)
Translates to: HKRGGAGSARYEHPSALGQVWHR*KSCHVS
Trigger: GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTG...ACCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCAGCCCCGCCACGCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp CACAAGCGTGGCGGGGCTGGCAGCGCCCGCTATGAGCACCCCTCTGCCCTTGGTTGTTCTCGTTGTGGATaGTGTCATTGTGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: HKRGGAGSARYEHPSALGCSRCG*CHCGSS
Trigger: AGAGGACCCACAATGACATCATCCACAACGAGAACA...ACCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCAGCCCCGCCACGCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTTGGCAGCGCCCGCTATaGGCACCCCTCTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTWQRPL*APLCPW
Trigger: CCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCA...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTCTGCAGTGCTCCGTGTaGTCCCCGCCGCCCTTGCGT +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTLQCSV*SPPPLR
Trigger: ACGCAAGGGCGGCGGGGAGCACACGGAGCACTGCAG...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367075.4
CDS-3UTR CCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAACTCTGCCCTTGGTCCTaGCCTGGCTGTTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQLCPWS*PGCYRA
Trigger: GGCCCTGTAACAGCCAGGCCAGGACCAAGGGCAGAG...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAGGGGATTCTCCTTCCTaGCCTCCTGGGCAGACACCT +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQGDSPS*PPGQTP
Trigger: AGGTGTCTGCCCAGGAGGTCAGGAAGGAGAATCCCC...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTCCTGGGACAGCTCGCTaGTCAGCGTCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTPGTAR*SASAAA
Trigger: GGCAGCTGCTGACGCTGAGCAGCGAGCTGTCCCAGG...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAACGGCCTCCACAAGCTaGCTTCCAGCAGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQTASTS*LPAACQ
Trigger: TTGGCAGGCTGCTGGAAGGCAGCTTGTGGAGGCCGT...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACAAGCGTGGCGGGGCTGGCAGCGCCCGCTATGAGCACCCCTCTGCCCTTGGTAGGAAGAAAAGTTTCTaGGTGATGTCCTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: HKRGGAGSARYEHPSALGRKKSF*VMSWMS
Trigger: GCTCATCCAGGACATCACCCAGAAACTTTTCTTCCT...ACCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCAGCCCCGCCACGCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTCTAAAGACACAAGCGTaGCGGGGCTGGCAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTLKTQA*RGWQRP
Trigger: CGGGCGCTGCCAGCCCCGCCACGCTTGTGTCTTTAG...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAATCTGCGCCCTCATCCTaGAAGCTCTCCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQSAPSS*KLSWTW
Trigger: CCATGTCCAGGAGAGCTTGCAGGATGAGGGCGCAGA...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCATCCCAACCCGGCGCCTaGAGTGCTCCGTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SAAWNPPAHGILAVKEKASQPGA*SAPCAP
Trigger: GGGAGCACACGGAGCACTGCAGGCGCCGGGTTGGGA...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367075.4
CDS-3UTR TCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGGGGGATTCTCCTTCCTaGCCTCCTGGGCAGACACCT +
Preference number: 4 (lower is better)
Translates to: SCEGESSAREGMSGRNQRGDSPS*PPGQTP
Trigger: AGGTGTCTGCCCAGGAGGTCAGGAAGGAGAATCCCC...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGGTGCACGAGAAGGAATaGGTGGGCGGAACCAACGGC +
Preference number: 4 (lower is better)
Translates to: SCEGESSAREGMSGRNQRVHEKE*VGGTNG
Trigger: GCCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCAC...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGCTCCTTAGCCCGCAGTaGAGCCATACGGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SCEGESSAREGMSGRNQRLLSPQ*SHTVSL
Trigger: GAGGCTGACCGTATGGCTGCACTGCGGGCTAAGGAG...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTCTCCTTAGCCCGCAGTaGAGCCATACGGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTLLSPQ*SHTVSL
Trigger: GAGGCTGACCGTATGGCTGCACTGCGGGCTAAGGAG...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAACTGTTTACACGTGACTaGAGCAGGCAGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQLFTRD*SRQVQL
Trigger: GAGCTGGACCTGCCTGCTGCAGTCACGTGTAAACAG...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTACGGCCTCCACAAGCTaGCTTCCAGCAGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTTASTS*LPAACQ
Trigger: TTGGCAGGCTGCTGGAAGGCAGCTTGTGGAGGCCGT...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACAAGCGTGGCGGGGCTGGCAGCGCCCGCTATGAGCACCCCTCTGCCCTTGGTAACTCGGACATTGATTaGTTTCGGCATTTTCGGTTT +
Preference number: 4 (lower is better)
Translates to: HKRGGAGSARYEHPSALGNSDID*FRHFRF
Trigger: AAACCGAAAATGCCGAAACCAATCAATGTCCGAGTT...ACCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCAGCCCCGCCACGCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337147.11
ENST00000367075.4
CDS-3UTR CCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAATCCGGTCCTCCCACTaGTCCCTGGTAAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQIRSSH*SLVSLC
Trigger: GCACAAACTTACCAGGGACCAGTGGGAGGACCGGAT...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGACCAGGGCGCCTCCCTaGTTCCCAGCCCAGAATGTT +
Preference number: 4 (lower is better)
Translates to: SCEGESSAREGMSGRNQRTRAPP*FPAQNV
Trigger: AACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGT...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTACCAGGGCGCCTCCCTaGTTCCCAGCCCAGAATGTT +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTTRAPP*FPAQNV
Trigger: AACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGT...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAAGCCTGCCAAGGCCATaGCAGAGAGAGACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQSLPRP*QRETAN
Trigger: GTTTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCT...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGGCCTGGGCCTTCATCTaGTGCACCTCGATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SCEGESSAREGMSGRNQRAWAFI*CTSMVS
Trigger: TGACACCATCGAGGTGCAGCAGATGAAGGCCCAGGC...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTTCTGCGCCCTCATCCTaGAAGCTCTCCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTSAPSS*KLSWTW
Trigger: CCATGTCCAGGAGAGCTTGCAGGATGAGGGCGCAGA...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGCCACCACTGCCCTCCTaGCACATCACATCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: SCEGESSAREGMSGRNQRPPLPS*HITSSA
Trigger: GGCACTTGATGTGATGTGGCAGGAGGGCAGTGGTGG...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTACGAGAAGGAATGAGTaGGCGGAACCAACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTTRRNE*AEPTAS
Trigger: GGAGGCCGTTGGTTCCGCCCACTCATTCCTTCTCGT...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGACTTGGCCCGGAACTTaGACTGGAGGGGATTCTCCT +
Preference number: 4 (lower is better)
Translates to: SCEGESSAREGMSGRNQRTWPGT*TGGDSP
Trigger: AGGAGAATCCCCTCCAGTTCAAGTTCCGGGCCAAGT...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTTGGTCCATCACTCTTTaGGGGATCAGCCGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTWSITL*GISRSE
Trigger: CTCTGAGCGGCTGATCCCTCAAAGAGTGATGGACCA...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTGCAGGATCCGCTTGTTaGTTCTCAGACGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTAGSAC*FSDVGH
Trigger: ATGCCCCACGTCTGAGAATCAACAAGCGGATCCTGC...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAATGGTGTCAGGCTTCCTaGGGCGCATATACAACTCAT +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQWCQAS*GAYTTH
Trigger: ATGAGTTGTATATGCGCCGCAGGAAGCCTGACACCA...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAATTCTCGCGCATCATCTaGTCTTTCTCTCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQFSRII*SFSLST
Trigger: CGTGGAGAGAGAGAAAGAGCAGATGATGCGCGAGAA...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAGCTTCTTTGGCCCTGTaGTGCCACTCTTCAACTTCA +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQASLAL*CHSSTS
Trigger: TGAAGTTGAAGAGTGGCAGCACAGGGCCAAAGAAGC...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAGGCATGGAATCCACCTaGACATGGCATCTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQGMEST*TWHLSC
Trigger: ACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCC...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATACCCGGCGCCTGCAGTaGTCCGTGTGCTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNTRRLQ*SVCSPP
Trigger: CGGCGGGGAGCACACGGAGCACTGCAGGCGCCGGGT...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367075.4
CDS-3UTR CCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTCATCCTGGGCTTCTTTaGCCCTGTGCTGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTHPGLL*PCAATL
Trigger: AAGAGTGGCAGCACAGGGCCAAAGAAGCCCAGGATG...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGCTAAAGACACAAGCGTaGCGGGGCTGGCAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKLKTQA*RGWQRP
Trigger: CGGGCGCTGCCAGCCCCGCCACGCTTGTGTCTTTAG...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTAGCCTGCCAAGGCCATaGCAGAGAGAGACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTSLPRP*QRETAN
Trigger: GTTTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCT...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAATTTTCGGTTTCTGGTaGGTATCCTCGATCCCCGAA +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQIFGFW*VSSIPE
Trigger: TTCGGGGATCGAGGATACTCACCAGAAACCGAAAAT...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337147.11
ENST00000367075.4
CDS-3UTR TCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTAATCCTGTTTACACGTaGCTGCAGCAGGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTNPVYT*LQQAGP
Trigger: TGGACCTGCCTGCTGCAGTCACGTGTAAACAGGATT...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAATATACAACTCATGGTTaGCCATGCAGAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQYTTHG*PCRAAG
Trigger: TCCTGCAGCTCTGCATGGGCAACCATGAGTTGTATA...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTACGCTCGTTCTTCTCTaGCTCAGTGATGCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTTLVLL*LSDALL
Trigger: GAGAAGCGCATCACTGAGGCAGAGAAGAACGAGCGT...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCCCTGGGACAGCTCGCTaGTCAGCGTCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSPGTAR*SASAAA
Trigger: GGCAGCTGCTGACGCTGAGCAGCGAGCTGTCCCAGG...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGTACTTGTCCCGGCCTTaGCTCATGTTCTCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SCEGESSAREGMSGRNQRYLSRP*LMFSLW
Trigger: CCACAACGAGAACATGAGGCAAGGCCGGGACAAGTA...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTTTCTGGGTGATGTCCTaGATGAGCTCCTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTFWVMS*MSSSAT
Trigger: TGTGGCTGAGGAGCTCATCCAGGACATCACCCAGAA...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGCTCTGCCCTTGGTCCTaGCCTGGCTGTTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKLCPWS*PGCYRA
Trigger: GGCCCTGTAACAGCCAGGCCAGGACCAAGGGCAGAG...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATACTCTGCCCTTGGTCCTaGCCTGGCTGTTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFILCPWS*PGCYRA
Trigger: GGCCCTGTAACAGCCAGGCCAGGACCAAGGGCAGAG...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCATGGTCCATCACTCTTTaGGGGATCAGCCGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SAAWNPPAHGILAVKEKAWSITL*GISRSE
Trigger: CTCTGAGCGGCTGATCCCTCAAAGAGTGATGGACCA...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGAGCTGCAGGGCCCTCTaGATCTGCTCCGAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKSCRAL*ICSESS
Trigger: AGAGCTCTCGGAGCAGATTCAGAGGGCCCTGCAGCT...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATAAGCTGCAGGGCCCTCTaGATCTGCTCCGAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFISCRAL*ICSESS
Trigger: AGAGCTCTCGGAGCAGATTCAGAGGGCCCTGCAGCT...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATAGTGCACGAGAAGGAATaGGTGGGCGGAACCAACGGC +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFIVHEKE*VGGTNG
Trigger: GCCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCAC...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGTTGCCCATGCAGAGCTaGAGGATCCGCTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: SCEGESSAREGMSGRNQRLPMQS*RIRLLI
Trigger: AATCAACAAGCGGATCCTGCAGCTCTGCATGGGCAA...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTTGGTGTCAGGCTTCCTaGGGCGCATATACAACTCAT +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTWCQAS*GAYTTH
Trigger: ATGAGTTGTATATGCGCCGCAGGAAGCCTGACACCA...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGCGAGAGCTCTCTCTCTaGCTTCTTTGTCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SCEGESSAREGMSGRNQRRELSL*LLCLLL
Trigger: GAGGAGAAGACAAAGAAGGCAGAGAGAGAGCTCTCG...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGCCTTCCAGCAGCCTaGCAAGGCCATGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFICLPAA*QGHGRE
Trigger: CTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCA...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTGGCATGGAATCCACCTaGACATGGCATCTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTGMEST*TWHLSC
Trigger: ACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCC...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCAGACGCTGTCCCAACCTaGAGTCAGAGCAGAACCCTT +
Preference number: 4 (lower is better)
Translates to: SAAWNPPAHGILAVKEKADAVPT*SQSRTL
Trigger: AAGGGTTCTGCTCTGACTCCAGGTTGGGACAGCGTC...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337147.11
CDS-3UTR CCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAAGGAAGAAAAGTTTCTaGGTGATGTCCTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQRKKSF*VMSWMS
Trigger: GCTCATCCAGGACATCACCCAGAAACTTTTCTTCCT...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAACTCATGTTCTCGTTGTaGATGATGTCATTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQLMFSL*MMSLWV
Trigger: GACCCACAATGACATCATCCACAACGAGAACATGAG...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCAGCTGCAGGGCCCTCTaGATCTGCTCCGAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSSCRAL*ICSESS
Trigger: AGAGCTCTCGGAGCAGATTCAGAGGGCCCTGCAGCT...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGTGTTCTCGTTGTGGATaGTGTCATTGTGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SCEGESSAREGMSGRNQRCSRCG*CHCGSS
Trigger: AGAGGACCCACAATGACATCATCCACAACGAGAACA...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTTTCACAGCTGGAGTCTaGAAGCTCATAGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTFTAGV*KLIVAC
Trigger: ACATGCCACTATGAGCTTTCAGACTCCAGCTGTGAA...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGTATACAACTCATGGTTaGCCATGCAGAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SCEGESSAREGMSGRNQRYTTHG*PCRAAG
Trigger: TCCTGCAGCTCTGCATGGGCAACCATGAGTTGTATA...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATCCTGGGACAGCTCGCTaGTCAGCGTCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNPGTAR*SASAAA
Trigger: GGCAGCTGCTGACGCTGAGCAGCGAGCTGTCCCAGG...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCATACTTGTCCCGGCCTTaGCTCATGTTCTCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SAAWNPPAHGILAVKEKAYLSRP*LMFSLW
Trigger: CCACAACGAGAACATGAGGCAAGGCCGGGACAAGTA...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGGTCCATCACTCTTTaGGGGATCAGCCGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFIWSITL*GISRSE
Trigger: CTCTGAGCGGCTGATCCCTCAAAGAGTGATGGACCA...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCATTGCCCATGCAGAGCTaGAGGATCCGCTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: SAAWNPPAHGILAVKEKALPMQS*RIRLLI
Trigger: AATCAACAAGCGGATCCTGCAGCTCTGCATGGGCAA...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCCCACCACTGCCCTCCTaGCACATCACATCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSPPLPS*HITSSA
Trigger: GGCACTTGATGTGATGTGGCAGGAGGGCAGTGGTGG...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGCTGTTTACACGTGACTaGAGCAGGCAGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKLFTRD*SRQVQL
Trigger: GAGCTGGACCTGCCTGCTGCAGTCACGTGTAAACAG...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCAGGCATGGAATCCACCTaGACATGGCATCTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: SAAWNPPAHGILAVKEKAGMEST*TWHLSC
Trigger: ACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCC...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATAATCCGGTCCTCCCACTaGTCCCTGGTAAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFIIRSSH*SLVSLC
Trigger: GCACAAACTTACCAGGGACCAGTGGGAGGACCGGAT...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCACCAGGAGGGCAATCTTaGCAGTGTATTCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SAAWNPPAHGILAVKEKAPGGQS*QCILQA
Trigger: AGCTTGCAGAATACACTGCCAAGATTGCCCTCCTGG...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATACATCCTGGGCTTCTTTaGCCCTGTGCTGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFIHPGLL*PCAATL
Trigger: AAGAGTGGCAGCACAGGGCCAAAGAAGCCCAGGATG...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATAAGCCTGCCAAGGCCATaGCAGAGAGAGACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFISLPRP*QRETAN
Trigger: GTTTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCT...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAATAGTCTTTACCACCTaGTCAAAAAGCTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQIVFTT*SKSCFP
Trigger: TGGAAAACAGCTTTTTGATCAGGTGGTAAAGACTAT...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATGGGGATTCTCCTTCCTaGCCTCCTGGGCAGACACCT +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNGDSPS*PPGQTP
Trigger: AGGTGTCTGCCCAGGAGGTCAGGAAGGAGAATCCCC...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCACTTGGCCCGGAACTTaGACTGGAGGGGATTCTCCT +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSTWPGT*TGGDSP
Trigger: AGGAGAATCCCCTCCAGTTCAAGTTCCGGGCCAAGT...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATGTGCACGAGAAGGAATaGGTGGGCGGAACCAACGGC +
Preference number: 4 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNVHEKE*VGGTNG
Trigger: GCCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCAC...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGACGCTCGTTCTTCTCTaGCTCAGTGATGCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKTLVLL*LSDALL
Trigger: GAGAAGCGCATCACTGAGGCAGAGAAGAACGAGCGT...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTCACAGATGGAAGTCCTaGCACGTTTCCTTTAATGAT +
Preference number: 4 (lower is better)
Translates to: TNQGASLVPSPECFCWVTHRWKS*HVSFND
Trigger: ATCATTAAAGGAAACGTGGCAGGACTTCCATCTGTG...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCCTGTTTACACGTGACTaGAGCAGGCAGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSLFTRD*SRQVQL
Trigger: GAGCTGGACCTGCCTGCTGCAGTCACGTGTAAACAG...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATACGGCCTCCACAAGCTaGCTTCCAGCAGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNTASTS*LPAACQ
Trigger: TTGGCAGGCTGCTGGAAGGCAGCTTGTGGAGGCCGT...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCATCCGGTCCTCCCACTaGTCCCTGGTAAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSIRSSH*SLVSLC
Trigger: GCACAAACTTACCAGGGACCAGTGGGAGGACCGGAT...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCCATCCTGGGCTTCTTTaGCCCTGTGCTGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSHPGLL*PCAATL
Trigger: AAGAGTGGCAGCACAGGGCCAAAGAAGCCCAGGATG...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAATCACATCAAGTGCCATaGTTTAGAGGGTTTTTCATA +
Preference number: 4 (lower is better)
Translates to: STSCLPAACQGHGRERLQSHQVP*FRGFFI
Trigger: TATGAAAAACCCTCTAAACCATGGCACTTGATGTGA...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATTCATGTCTGCGGCATaGAATCCACCTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFIFMSAA*NPPAHG
Trigger: GCCATGTGCAGGTGGATTCCATGCCGCAGACATGAA...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATTCAGCCGCTCAGAGCTaGGGTACCCAGACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNSAAQS*GTQTCA
Trigger: TGCACAAGTCTGGGTACCTCAGCTCTGAGCGGCTGA...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCAATCCTGTTTACACGTaGCTGCAGCAGGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSNPVYT*LQQAGP
Trigger: TGGACCTGCCTGCTGCAGTCACGTGTAAACAGGATT...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGTGGTGTCAGGCTTCCTaGGGCGCATATACAACTCAT +
Preference number: 4 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKWCQAS*GAYTTH
Trigger: ATGAGTTGTATATGCGCCGCAGGAAGCCTGACACCA...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATGCCTGGGCCTTCATCTaGTGCACCTCGATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNAWAFI*CTSMVS
Trigger: TGACACCATCGAGGTGCAGCAGATGAAGGCCCAGGC...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATGCCTGGGCCTTCATCTaGTGCACCTCGATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNAWAFI*CTSMVS
Trigger: TGACACCATCGAGGTGCAGCAGATGAAGGCCCAGGC...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATAGCTTCTTTGGCCCTGTaGTGCCACTCTTCAACTTCA +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFIASLAL*CHSSTS
Trigger: TGAAGTTGAAGAGTGGCAGCACAGGGCCAAAGAAGC...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTGCGCCCTCATCCTaGAAGCTCTCCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNSAPSS*KLSWTW
Trigger: CCATGTCCAGGAGAGCTTGCAGGATGAGGGCGCAGA...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATCCACCACTGCCCTCCTaGCACATCACATCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNPPLPS*HITSSA
Trigger: GGCACTTGATGTGATGTGGCAGGAGGGCAGTGGTGG...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCACTTTTATTTCATGTCTaGGGCATGGAATCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SAAWNPPAHGILAVKEKALLFHV*GMESTC
Trigger: GCAGGTGGATTCCATGCCGCAGACATGAAATAAAAG...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATACGCATATACAACTCATaGTTGCCCATGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFIRIYNS*LPMQSC
Trigger: GCAGCTCTGCATGGGCAACCATGAGTTGTATATGCG...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGCCAGGAGGGCAATCTTaGCAGTGTATTCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKPGGQS*QCILQA
Trigger: AGCTTGCAGAATACACTGCCAAGATTGCCCTCCTGG...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATACTTGGCCCGGAACTTaGACTGGAGGGGATTCTCCT +
Preference number: 4 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNTWPGT*TGGDSP
Trigger: AGGAGAATCCCCTCCAGTTCAAGTTCCGGGCCAAGT...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATGCAGGATCCGCTTGTTaGTTCTCAGACGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNAGSAC*FSDVGH
Trigger: ATGCCCCACGTCTGAGAATCAACAAGCGGATCCTGC...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATGCAGGATCCGCTTGTTaGTTCTCAGACGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNAGSAC*FSDVGH
Trigger: ATGCCCCACGTCTGAGAATCAACAAGCGGATCCTGC...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCCGAGAGCTCTCTCTCTaGCTTCTTTGTCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSRELSL*LLCLLL
Trigger: GAGGAGAAGACAAAGAAGGCAGAGAGAGAGCTCTCG...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCCGCGAGAATCAGGCCTaGTTGGCACTATTACAACTG +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSRENQA*LALLQL
Trigger: CAGTTGTAATAGTGCCAAGCAGGCCTGATTCTCGCG...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCCGCATATACAACTCATaGTTGCCCATGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSRIYNS*LPMQSC
Trigger: GCAGCTCTGCATGGGCAACCATGAGTTGTATATGCG...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGAGAATCAGGCCTGCTTaGCACTATTACAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKRIRPA*HYYNWG
Trigger: TCCCCAGTTGTAATAGTGCCAAGCAGGCCTGATTCT...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCATTTTCGGTTTCTGGTaGGTATCCTCGATCCCCGAA +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSIFGFW*VSSIPE
Trigger: TTCGGGGATCGAGGATACTCACCAGAAACCGAAAAT...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337147.11
ENST00000367075.4
CDS-3UTR TCA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATAATCCTGTTTACACGTaGCTGCAGCAGGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNNPVYT*LQQAGP
Trigger: TGGACCTGCCTGCTGCAGTCACGTGTAAACAGGATT...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTCTCCTTAGCCCGCAGTaGAGCCATACGGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFLLSPQ*SHTVSL
Trigger: GAGGCTGACCGTATGGCTGCACTGCGGGCTAAGGAG...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATACGCTCGTTCTTCTCTaGCTCAGTGATGCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNTLVLL*LSDALL
Trigger: GAGAAGCGCATCACTGAGGCAGAGAAGAACGAGCGT...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTTGCCTTCCAGCAGCCTaGCAAGGCCATGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFCLPAA*QGHGRE
Trigger: CTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCA...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATACTTTTATTTCATGTCTaGGGCATGGAATCCACCTGC +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFILLFHV*GMESTC
Trigger: GCAGGTGGATTCCATGCCGCAGACATGAAATAAAAG...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATACTCATGTTCTCGTTGTaGATGATGTCATTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFILMFSL*MMSLWV
Trigger: GACCCACAATGACATCATCCACAACGAGAACATGAG...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCAGAATCAGGCCTGCTTaGCACTATTACAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSRIRPA*HYYNWG
Trigger: TCCCCAGTTGTAATAGTGCCAAGCAGGCCTGATTCT...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCGAATCCACCTGCACATaGCATCTTAGCTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSESTCT*HLSCEG
Trigger: TCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTC...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCAATAGTCTTTACCACCTaGTCAAAAAGCTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SAAWNPPAHGILAVKEKAIVFTT*SKSCFP
Trigger: TGGAAAACAGCTTTTTGATCAGGTGGTAAAGACTAT...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTTCAGCCGCTCAGAGCTaGGGTACCCAGACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFSAAQS*GTQTCA
Trigger: TGCACAAGTCTGGGTACCTCAGCTCTGAGCGGCTGA...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATAAAACACAAAGTCAGGTaGCTTCTTGTCGATGGGTTT +
Preference number: 4 (lower is better)
Translates to: HCPPATSHQVPWFRGFFIKHKVR*LLVDGF
Trigger: AAACCCATCGACAAGAAGGCACCTGACTTTGTGTTT...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATGCTTCTTTGGCCCTGTaGTGCCACTCTTCAACTTCA +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNASLAL*CHSSTS
Trigger: TGAAGTTGAAGAGTGGCAGCACAGGGCCAAAGAAGC...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATCGCGAGAATCAGGCCTaGTTGGCACTATTACAACTG +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNRENQA*LALLQL
Trigger: CAGTTGTAATAGTGCCAAGCAGGCCTGATTCTCGCG...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGCACAGATGGAAGTCCTaGCACGTTTCCTTTAATGAT +
Preference number: 4 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKHRWKS*HVSFND
Trigger: ATCATTAAAGGAAACGTGGCAGGACTTCCATCTGTG...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCAGGAAGAAAAGTTTCTaGGTGATGTCCTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSRKKSF*VMSWMS
Trigger: GCTCATCCAGGACATCACCCAGAAACTTTTCTTCCT...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCCTCATGTTCTCGTTGTaGATGATGTCATTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSLMFSL*MMSLWV
Trigger: GACCCACAATGACATCATCCACAACGAGAACATGAG...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATCAAGTATGGCACAGATaGAAGTCCTGCCACGTTTCC +
Preference number: 4 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNQVWHR*KSCHVS
Trigger: GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTG...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCAAACACAAAGTCAGGTaGCTTCTTGTCGATGGGTTT +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSKHKVR*LLVDGF
Trigger: AAACCCATCGACAAGAAGGCACCTGACTTTGTGTTT...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATTATACAACTCATGGTTaGCCATGCAGAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNYTTHG*PCRAAG
Trigger: TCCTGCAGCTCTGCATGGGCAACCATGAGTTGTATA...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCCCACATCACATCAAGTaGCATGGTTTAGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSPHHIK*HGLEGF
Trigger: AAAACCCTCTAAACCATGGCACTTGATGTGATGTGG...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATGAATCCACCTGCACATaGCATCTTAGCTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNESTCT*HLSCEG
Trigger: TCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTC...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTTACTTGTCCCGGCCTTaGCTCATGTTCTCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFYLSRP*LMFSLW
Trigger: CCACAACGAGAACATGAGGCAAGGCCGGGACAAGTA...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTTTCTGGGTGATGTCCTaGATGAGCTCCTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFFWVMS*MSSSAT
Trigger: TGTGGCTGAGGAGCTCATCCAGGACATCACCCAGAA...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATAAACACAAAGTCAGGTaGCTTCTTGTCGATGGGTTT +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNKHKVR*LLVDGF
Trigger: AAACCCATCGACAAGAAGGCACCTGACTTTGTGTTT...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTTTCTCGCGCATCATCTaGTCTTTCTCTCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFFSRII*SFSLST
Trigger: CGTGGAGAGAGAGAAAGAGCAGATGATGCGCGAGAA...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTCGAGAGCTCTCTCTCTaGCTTCTTTGTCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFRELSL*LLCLLL
Trigger: GAGGAGAAGACAAAGAAGGCAGAGAGAGAGCTCTCG...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATCCACATCACATCAAGTaGCATGGTTTAGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNPHHIK*HGLEGF
Trigger: AAAACCCTCTAAACCATGGCACTTGATGTGATGTGG...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATCCACATCACATCAAGTaGCATGGTTTAGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNPHHIK*HGLEGF
Trigger: AAAACCCTCTAAACCATGGCACTTGATGTGATGTGG...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTCAAGTATGGCACAGATaGAAGTCCTGCCACGTTTCC +
Preference number: 4 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFQVWHR*KSCHVS
Trigger: GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTG...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR TCA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTTTCACAGCTGGAGTCTaGAAGCTCATAGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFFTAGV*KLIVAC
Trigger: ACATGCCACTATGAGCTTTCAGACTCCAGCTGTGAA...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATAACTCGGACATTGATTaGTTTCGGCATTTTCGGTTT +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNNSDID*FRHFRF
Trigger: AAACCGAAAATGCCGAAACCAATCAATGTCCGAGTT...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337147.11
ENST00000367075.4
CDS-3UTR TCA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATATAGTCTTTACCACCTaGTCAAAAAGCTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNIVFTT*SKSCFP
Trigger: TGGAAAACAGCTTTTTGATCAGGTGGTAAAGACTAT...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR GCA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTCTTTTATTTCATGTCTaGGGCATGGAATCCACCTGC +
Preference number: 4 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFLLFHV*GMESTC
Trigger: GCAGGTGGATTCCATGCCGCAGACATGAAATAAAAG...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCACATCAAGTGCCATaGTTTAGAGGGTTTTTCATA +
Preference number: 4 (lower is better)
Translates to: PPATSHQVPWFRGFFICNSHQVP*FRGFFI
Trigger: TATGAAAAACCCTCTAAACCATGGCACTTGATGTGA...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CCA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTTCACATCAAGTGCCATaGTTTAGAGGGTTTTTCATA +
Preference number: 4 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFSHQVP*FRGFFI
Trigger: TATGAAAAACCCTCTAAACCATGGCACTTGATGTGA...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS CCA 90 bp CCGAAAACACGACTATCCAGCAGCAGCGAAGACGCTGTCCCAACCTaGAGTCAGAGCAGAACCCTTAGAGCGCCCGCCCGCCCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: PKTRLSSSSEDAVPT*SQSRTLRAPARPAS
Trigger: CGAGGCAGGGCGGGCGGGCGCTCTAAGGGTTCTGCTCTGACTCCAGGTTGGGACAGCGTCTTCGCTGCTGCTGGATAGTCGTGTTTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337147.11
CDS-3UTR CAA 90 bp CACAAGCGTGGCGGGGCTGGCAGCGCCCGCTATGAGCACCCCTCTGCCCTTGGTTCCAGGAGGGCAATCTaGGCAGTGTATTCTGCAAGC +
Preference number: 5 (lower is better)
Translates to: HKRGGAGSARYEHPSALGSRRAI*AVYSAS
Trigger: GCTTGCAGAATACACTGCCAAGATTGCCCTCCTGGA...ACCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCAGCCCCGCCACGCTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp CACAAGCGTGGCGGGGCTGGCAGCGCCCGCTATGAGCACCCCTCTGCCCTTGGTTGGTCCCTGGTAAGTTaGTGCTGGTCCATCACTCTT +
Preference number: 5 (lower is better)
Translates to: HKRGGAGSARYEHPSALGWSLVS*CWSITL
Trigger: AAGAGTGATGGACCAGCACAAACTTACCAGGGACCA...ACCAAGGGCAGAGGGGTGCTCATAGCGGGCGCTGCCAGCCCCGCCACGCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp TCCACAAGCTGCCTTCCAGCAGCCTGCCAAGGCCATGGCAGAGAGAGACTGCAAAGCTGCAGGATCCGCTaGTTGATTCTCAGACGTGGG +
Preference number: 5 (lower is better)
Translates to: STSCLPAACQGHGRERLQSCRIR*LILRRG
Trigger: CCCACGTCTGAGAATCAACAAGCGGATCCTGCAGCT...TTGCAGTCTCTCTCTGCCATGGCCTTGGCAGGCTGCTGGAAGGCAGCTTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTAACTTGGCCCGGAACTaGAACTGGAGGGGATTCTCC +
Preference number: 5 (lower is better)
Translates to: TNQGASLVPSPECFCWVTNLARN*NWRGFS
Trigger: GGAGAATCCCCTCCAGTTCAAGTTCCGGGCCAAGTT...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTAGCTGCAGGATCCGCTaGTTGATTCTCAGACGTGGG +
Preference number: 5 (lower is better)
Translates to: TNQGASLVPSPECFCWVTSCRIR*LILRRG
Trigger: CCCACGTCTGAGAATCAACAAGCGGATCCTGCAGCT...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCATCATCCTGGGCTTCTTaGGCCCTGTGCTGCCACTCT +
Preference number: 5 (lower is better)
Translates to: SAAWNPPAHGILAVKEKASSWAS*ALCCHS
Trigger: AGAGTGGCAGCACAGGGCCAAAGAAGCCCAGGATGA...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGCTCTGTTTCCAGCTGTaGCCGCTCCAGCTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKLCFQL*PLQLLL
Trigger: CAGAAGCAGCTGGAGCGGCAACAGCTGGAAACAGAG...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp CACTGCCCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATCATCCTGGGCTTCTTaGGCCCTGTGCTGCCACTCT +
Preference number: 5 (lower is better)
Translates to: HCPPATSHQVPWFRGFFISSWAS*ALCCHS
Trigger: AGAGTGGCAGCACAGGGCCAAAGAAGCCCAGGATGA...TATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGGGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS TCA 90 bp GTTTGTGCTGGTCCATCACTCTTTGAGGGATCAGCCGCTCAGAGCTaGGGTACCCAGACTTGTGCACTTCTTTGTTGTAGTCCCCAAACT +
Preference number: 5 (lower is better)
Translates to: VCAGPSLFEGSAAQS*GTQTCALLCCSPQT
Trigger: AGTTTGGGGACTACAACAAAGAAGTGCACAAGTCTGGGTACCTCAGCTCTGAGCGGCTGATCCCTCAAAGAGTGATGGACCAGCACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
ENST00000476189.1
CDS-3UTR CAA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCATGGTCCCTGGTAAGTTaGTGCTGGTCCATCACTCTT +
Preference number: 5 (lower is better)
Translates to: SAAWNPPAHGILAVKEKAWSLVS*CWSITL
Trigger: AAGAGTGATGGACCAGCACAAACTTACCAGGGACCA...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp ACAAACCAGGGCGCCTCCCTGGTTCCCAGCCCAGAATGTTTCTGTTGGGTAACTAAGTCAGGTGCCTTCTaGTCGATGGGTTTAATGACA +
Preference number: 5 (lower is better)
Translates to: TNQGASLVPSPECFCWVTKSGAF*SMGLMT
Trigger: TGTCATTAAACCCATCGACAAGAAGGCACCTGACTT...AGTTACCCAACAGAAACATTCTGGGCTGGGAACCAGGGAGGCGCCCTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCAATATACAACTCATGGTaGCCCATGCAGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SAAWNPPAHGILAVKEKAIYNSW*PMQSCR
Trigger: CCTGCAGCTCTGCATGGGCAACCATGAGTTGTATAT...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGTCCAGGAGGGCAATCTaGGCAGTGTATTCTGCAAGC +
Preference number: 5 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKSRRAI*AVYSAS
Trigger: GCTTGCAGAATACACTGCCAAGATTGCCCTCCTGGA...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp TATTTCATGTCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGTGGTCCCTGGTAAGTTaGTGCTGGTCCATCACTCTT +
Preference number: 5 (lower is better)
Translates to: YFMSAAWNPPAHGILAVKWSLVS*CWSITL
Trigger: AAGAGTGATGGACCAGCACAAACTTACCAGGGACCA...CTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGACATGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp TCTGCGGCATGGAATCCACCTGCACATGGCATCTTAGCTGTGAAGGAGAAAGCAAACATAGCATTATCTTaGAGCATCCCACGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: SAAWNPPAHGILAVKEKANIALS*SIPRCS
Trigger: GGAACACCGTGGGATGCTCAAAGATAATGCTATGTT...TGCTTTCTCCTTCACAGCTAAGATGCCATGTGCAGGTGGATTCCATGCCGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATAACTTGGCCCGGAACTaGAACTGGAGGGGATTCTCC +
Preference number: 5 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNNLARN*NWRGFS
Trigger: GGAGAATCCCCTCCAGTTCAAGTTCCGGGCCAAGTT...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp TCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCTTTAATCTGGTCCATCACTCTTaGAGGGATCAGCCGCTCAGA +
Preference number: 5 (lower is better)
Translates to: SNTEQVWHRWKSCHVSFNLVHHS*RDQPLR
Trigger: TCTGAGCGGCTGATCCCTCAAAGAGTGATGGACCAG...ATTAAAGGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp AGCTGTGAAGGAGAAAGCAGTGCACGAGAAGGAATGAGTGGGCGGAACCAACGGAAGGAAAGCCAATCTTaGGGGTTAACTTATCATCTT +
Preference number: 5 (lower is better)
Translates to: SCEGESSAREGMSGRNQRKESQS*GLTYHL
Trigger: AAGATGATAAGTTAACCCCAAAGATTGGCTTTCCTT...CCGTTGGTTCCGCCCACTCATTCCTTCTCGTGCACTGCTTTCTCCTTCACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp CTCATTTCGAATACAGAACAAGTATGGCACAGATGGAAGTCCTGCCACGTTTCCATATACAACTCATGGTaGCCCATGCAGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LISNTEQVWHRWKSCHVSIYNSW*PMQSCR
Trigger: CCTGCAGCTCTGCATGGGCAACCATGAGTTGTATAT...GGAAACGTGGCAGGACTTCCATCTGTGCCATACTTGTTCTGTATTCGAAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp CCTCCTGCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATGAGAATCAGGCCTGCTaGGCACTATTACAACTGGGG +
Preference number: 5 (lower is better)
Translates to: PPATSHQVPWFRGFFICNENQAC*ALLQLG
Trigger: CCCCAGTTGTAATAGTGCCAAGCAGGCCTGATTCTC...ATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGCAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTCTCTGTTTCCAGCTGTaGCCGCTCCAGCTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFLCFQL*PLQLLL
Trigger: CAGAAGCAGCTGGAGCGGCAACAGCTGGAAACAGAG...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTAACTTGGCCCGGAACTaGAACTGGAGGGGATTCTCC +
Preference number: 5 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFNLARN*NWRGFS
Trigger: GGAGAATCCCCTCCAGTTCAAGTTCCGGGCCAAGTT...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTGAGAATCAGGCCTGCTaGGCACTATTACAACTGGGG +
Preference number: 5 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFENQAC*ALLQLG
Trigger: CCCCAGTTGTAATAGTGCCAAGCAGGCCTGATTCTC...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTATATACAACTCATGGTaGCCCATGCAGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFIYNSW*PMQSCR
Trigger: CCTGCAGCTCTGCATGGGCAACCATGAGTTGTATAT...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTAAGTCAGGTGCCTTCTaGTCGATGGGTTTAATGACA +
Preference number: 5 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFKSGAF*SMGLMT
Trigger: TGTCATTAAACCCATCGACAAGAAGGCACCTGACTT...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS-3UTR CAA 90 bp GCCACATCACATCAAGTGCCATGGTTTAGAGGGTTTTTCATATGTAATTCTTTTAAAGCTGTTTTCCAGTaGTATTTGGCTGGATTGCAA +
Preference number: 5 (lower is better)
Translates to: ATSHQVPWFRGFFICNSFKAVFQ*YLAGLQ
Trigger: TTGCAATCCAGCCAAATACAACTGGAAAACAGCTTT...AAAAGAATTACATATGAAAAACCCTCTAAACCATGGCACTTGATGTGATGTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
CDS CCA 72 bp CGACTATCCAGCAGCAGCGAAGACGCTGTCCCAACCTaGAGTCAGAGCAGAACCCTTAGAGCGCCCGCCCGC +
Preference number: 6 (lower is better)
Translates to: RLSSSSEDAVPT*SQSRTLRAPAR
Trigger: GCGGGCGGGCGCTCTAAGGGTTCTGCTCTGACTCCAGGTTGGGACAGCGTCTTCGCTGCTGCTGGATAGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337147.11
CDS TCA 72 bp GGTCCATCACTCTTTGAGGGATCAGCCGCTCAGAGCTaGGGTACCCAGACTTGTGCACTTCTTTGTTGTAGT +
Preference number: 6 (lower is better)
Translates to: GPSLFEGSAAQS*GTQTCALLCCS
Trigger: ACTACAACAAAGAAGTGCACAAGTCTGGGTACCTCAGCTCTGAGCGGCTGATCCCTCAAAGAGTGATGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337147.11
ENST00000367075.4
ENST00000392177.8
ENST00000476189.1